LOCUS       DASUYN010000001         2339 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1102880, whole genome shotgun sequence.
ACCESSION   DASUYN010000001 DASUYN010000000
VERSION     DASUYN010000001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2339)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2339)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2339
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1102880"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..192)
                     /locus_tag="VF061_00005"
     CDS             complement(<1..192)
                     /locus_tag="VF061_00005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HEX6667902.1"
                     /translation="MPLSPMEVLRKVPLFSGLSEADLAAFAELTRERSYPKGSVIVFE
                     DDPGDALFLVAAGQVKVVLI"
     gene            378..602
                     /gene="rpmE"
                     /locus_tag="VF061_00010"
     CDS             378..602
                     /gene="rpmE"
                     /locus_tag="VF061_00010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003151132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HEX6667903.1"
                     /translation="MKADLHPVYRKVTAVCACGNSFETRSTSSSIHVEVCAQCHPYFT
                     GKQRLVDTAGRVDRFRRKYQSEPAAAAPKA"
     gene            606..1664
                     /gene="prfA"
                     /locus_tag="VF061_00015"
     CDS             606..1664
                     /gene="prfA"
                     /locus_tag="VF061_00015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016149 - translation release factor
                     activity, codon specific [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HEX6667904.1"
                     /translation="MEGRLRQALQRAEEVGRALSDPLVARDPTQLKALGREHTRLAPV
                     VRLADRLTRLESDLAQARELADAPDPELAALARADVARIPPEIESVSRELHELLLPQD
                     PHDARDAIVEIRAGTGGDEAALFAADLYRMYQRFSERNGLTWEPLTLSEGTLGGIKEA
                     VVAVRGDGAYGLLRRESGVHRVQRVPATETQGRIHTSAATVAVLPEAEEVDVKIEDKD
                     IRVDVFRSSGPGGQSVNTTDSAVRITHLPTGLVVSQQDQKSQQQNKLKAMEVLRARLL
                     DRMIAEQEAARSRERKAMVGTGDRSAKIRTYNFPQSRVTDHRINLSVHNLGDVIDGHL
                     DELVDALRMASRQEQDGA"
     gene            1666..>2339
                     /locus_tag="VF061_00020"
     CDS             1666..>2339
                     /locus_tag="VF061_00020"
                     /inference="COORDINATES: protein motif:HMM:TIGR00536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HEX6667905.1"
                     /translation="MLPSRRDLLAEATAALASGGVPEPRREALRLWAELCPSVAEVLI
                     EGEAETDAELATALRELVRRRAAGEPLAHVTGRTGFRTLTLRTDRRALIPRPETEGLV
                     DLLLARVRTGRVVDIGTGTGCLALSLAAEGGFERVVAVDRSAEALGLARENRDALGLG
                     VALVRGDLCGPFRPGSLDAVISNPPYLTEREYAELDPSVKAWEPGVALVSGPDGLVAS
                     LRLLREA"
BASE COUNT          351 a          810 c          848 g          330 t
ORIGIN      
        1 gatcagtacg accttgacct gtccggccgc gacgaggaac agggcgtctc ccggatcgtc
       61 ttcgaacacg atgacgctgc ccttgggata actccgctcg cgcgtcagct cagcgaacgc
      121 cgccaggtcg gcctcgctga gaccggagaa gagtgggacc ttgcgcagga cctccatcgg
      181 agacagcggc acgggggggc ctctcggaag cggaagtggt tggcggtagc atacttgcgc
      241 acgggtgggg tgtcaacata cgggccgctc ctctttccgc ggtcgcgccg ggcgcccccg
      301 cgccgtgggt ctatcgccct gtcatctcgt cctgatgcca gctagatttg catgctaacc
      361 cggaacggag tttggaagtg aaggcagatc tgcatcccgt ctatcgcaag gtcaccgccg
      421 tgtgcgcctg cgggaactcc ttcgagaccc gctcgacctc ctcgtcgatt cacgtcgagg
      481 tgtgcgccca gtgtcacccc tactttaccg gcaagcagcg cctggtcgat acggccggcc
      541 gggtggaccg gttccggcgg aagtaccaga gcgagccggc cgccgccgcg cccaaggcgt
      601 aatccgtgga ggggaggctc cgccaggcgc tgcagcgggc ggaggaagtc ggcagggcac
      661 tctccgatcc gctggtcgcg cgggacccca cccagctcaa ggcgctcggg cgcgagcaca
      721 cgcggctcgc gcccgtcgtg cgtctggcgg accgactcac ccggctggaa agcgacctcg
      781 cccaggcccg cgagctggcc gacgcccccg acccggagct ggccgcgctc gccagggcgg
      841 acgtcgcccg gatccccccc gagatcgaat ccgtttcccg ggagctgcac gagctgctcc
      901 tgccccagga cccccacgac gcgcgtgacg cgatcgtgga gatccgcgcg ggcaccggtg
      961 gcgacgaggc cgcgctcttc gccgccgatc tctaccggat gtatcagcgc ttttccgagc
     1021 ggaacggcct gacctgggag ccgctcacct tgagtgaagg gaccctggga gggatcaagg
     1081 aggccgtggt cgcggtccgg ggcgacggcg cctacggcct gctccgccgg gagtccggcg
     1141 tgcaccgggt ccagcgggtg ccggccaccg agacccaggg tcgcatccac acctcggcgg
     1201 ccacggtggc ggtgctgccc gaggcggaag aggtggatgt gaagatcgag gacaaggaca
     1261 tccgggtgga cgtgttccgc tcctcgggtc ccggcgggca gagcgtgaac actaccgaca
     1321 gcgcggtgcg gatcacccac ctgcccaccg ggctggtggt cagccagcag gatcagaagt
     1381 cccagcagca gaacaagctc aaggcgatgg aggtgctccg cgcccggctc ctcgatcgca
     1441 tgatcgcgga gcaggaggcg gcccgctccc gcgagcgcaa ggcgatggtc ggcaccgggg
     1501 accggtcggc caagatccgc acctacaact ttccccaaag ccgggtgacg gaccaccgga
     1561 tcaacctctc ggtccacaac ctcggcgacg tcatcgacgg gcacctggac gagctggtgg
     1621 acgcgctccg catggccagc cgacaggagc aggatggggc ctgaggtgtt gccctcacgc
     1681 cgggatctgc tcgccgaagc gacggccgca ctcgcgagcg gaggcgtgcc cgagccgcgc
     1741 cgcgaggccc tgcgcctctg ggccgagctg tgcccgagtg tggcggaagt cctgatcgag
     1801 ggggaggccg agaccgacgc cgagctggcg accgcgctgc gcgagctggt ccgccgccgg
     1861 gcggctggcg agcccctggc ccatgtgacc ggacgaaccg gtttcaggac cctcaccctc
     1921 cggacggacc gccgggccct gatcccgcgc cccgagaccg aagggctggt ggacctcctg
     1981 ctcgcccggg tccgcaccgg gcgggtggtg gatatcggga ccggcaccgg ttgcctcgcc
     2041 ctgagcctgg cggcggaagg tggcttcgag cgggtggtgg cggtggaccg ctccgcggag
     2101 gcgctggggc tcgcgcgtga gaaccgcgac gcgctgggtc tcggggtggc gctggtccgc
     2161 ggcgacctgt gcggaccgtt ccgcccgggc tccctggacg cggtgatctc caatcccccc
     2221 tatcttaccg agcgggagta cgccgagctg gacccgtcgg tgaaggcgtg ggagccgggg
     2281 gtggccctgg tgagcggacc cgacggtctc gtcgcctcgc tgcgcctgct gcgggaggc
//
LOCUS       DASUYN010000002         3171 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_662969, whole genome shotgun sequence.
ACCESSION   DASUYN010000002 DASUYN010000000
VERSION     DASUYN010000002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3171)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3171)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3171
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_662969"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..818
                     /locus_tag="VF061_00025"
     CDS             <1..818
                     /locus_tag="VF061_00025"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008795 - NAD+ synthase activity [Evidence
                     IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD+ synthase"
                     /protein_id="HEX6667906.1"
                     /translation="APLEIDPELTRRWLVEFLRDEVQRRRGFEKVVIGLSGGVDSSVV
                     AYLAAEALGPRNVTGVRMPYRTSSPESLEHAQLVVDQLGIEARTVDITAAVDGLASAI
                     GGGHEPGRLGNIMARARMITLFDLSAAERSLPLGTGNKTERLLGYFTWHADDSPPVNP
                     IGDLFKTQVWALARHLGVPDVIVSKPASADLIQGQTDEGDFGISYHRADAILHWILLG
                     YRNPEIVPLGFTEEEIGLVRRRLDSTHWKRRLPTVAMLSATAIGEYYLRPVDY"
     gene            832..1305
                     /locus_tag="VF061_00030"
     CDS             832..1305
                     /locus_tag="VF061_00030"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: protein motif:HMM:NF015048.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEX6667907.1"
                     /translation="MIPDSRPMSFSVGTITTFVMPHMQNVRGDLFGGELMALVDQAAA
                     VAAIRHAGGPAVTASIDRVDFKQRIPVGALVTCVATVDYVGNSSMDITVEVYAEKVST
                     GERSHTNTAHVVFVAIDGEGKPRRVPRLVPETEEERERYARAEEHRHRQQQQRRK"
     gene            1302..2132
                     /locus_tag="VF061_00035"
     CDS             1302..2132
                     /locus_tag="VF061_00035"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEX6667908.1"
                     /translation="MTLAGVTLVLSGGGAKSAAHIGAARALAEAGLLPLRYVATSMGA
                     VIAAALAGGADRDRLLAGLGEVGRTGVVKDPLAFIRGLFARSLLRPAPFREAVGRLVP
                     ARRFDQLAVPVTVTVTDLDTGQLLLFGAGGEDAPLLDVLCASCALPLYYPPVSLGGRR
                     CGDGGLRGPLPLEVAAAFARETVVAVDVGPGFDVSEPPPPGAPPVVRAHDDAVGALMA
                     QATAAQLALWRGDASRPPLIYVRPKVERAATFRVDRVRQYAEDGYVAAREALASMPRP
                     "
     gene            2164..2571
                     /locus_tag="VF061_00040"
     CDS             2164..2571
                     /locus_tag="VF061_00040"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEX6667909.1"
                     /translation="MKASEAMVADPHVAVAGAMASEVAIMLKTRNISVVPVVDDHRTR
                     RFLGTLSDRDLVTRCLAEGKHPWHTRADSLMRTNSPVVVPEQELEGYTIRMDLDPNES
                     HLRPTITVVDGDHRVVGFISHPEQVAGIEIVWG"
     gene            2577..3002
                     /locus_tag="VF061_00045"
     CDS             2577..3002
                     /locus_tag="VF061_00045"
                     /inference="COORDINATES: protein motif:HMM:NF021486.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2203 domain-containing protein"
                     /protein_id="HEX6667910.1"
                     /translation="MPEFKLFSLQEAERTLPLVRRIVQDLTLEYPAWRAAVARFELLT
                     GGARADWGETGELLAAREDVTRHADRINRYLQELEAVGCVFKGFDAGLVDFYSLREDR
                     PIFLCWRLGEERITHWHEIDAGFSGRQPIDGAILSATAS"
BASE COUNT          440 a         1122 c         1135 g          474 t
ORIGIN      
        1 ccgctccact cgagatcgat cccgagctca cccgccgctg gctggtcgag ttcctccgcg
       61 acgaggtgca gcgccgccgg ggcttcgaga aggtcgtcat cggcctctcc gggggagtgg
      121 acagctcggt ggtggcctac ctcgcggcgg aggcgctcgg gccccggaac gtcaccgggg
      181 tgcggatgcc gtaccggacc tccagccccg agagtctgga gcacgcccag ctggtggtcg
      241 atcagctcgg catcgaggct cgaaccgtgg acatcacggc cgcggtggac ggattggcct
      301 cggccatcgg cggcgggcac gagccggggc ggctggggaa catcatggcg cgggcccgca
      361 tgatcaccct tttcgatctc tccgccgccg aacggtccct gccgctgggc accggcaaca
      421 agaccgagcg gctgctgggc tacttcacct ggcacgccga cgactcgccg cccgtcaacc
      481 ccatcggcga cctcttcaag acccaggtct gggccctcgc gaggcatctg ggggtgcccg
      541 acgtgatcgt ctccaagccg gccagcgccg acctcatcca gggtcagacc gacgagggcg
      601 acttcggcat ctcctaccat cgggcggacg ccattctcca ctggatcctg ctcggctacc
      661 ggaatcccga gatcgtgccg ctggggttca ccgaagagga gatcgggctg gtgcgccggc
      721 ggctcgattc cacccactgg aagcggcgcc tgcctacggt cgcgatgctc agtgcgacgg
      781 ccatcgggga gtattacctg cggccggtgg attactgaca ccccgagccc catgattccc
      841 gactcccgcc ccatgtcctt ctcggtcggc accatcacca ccttcgtcat gccccacatg
      901 cagaacgtcc gcggcgatct cttcggcggc gagctgatgg cgctggtgga tcaggcggcc
      961 gcggtggcgg cgatccggca cgccgggggg cccgcggtga cggcgagcat cgaccgggtg
     1021 gacttcaagc agcggattcc ggtgggcgcg ctggtgacct gcgtcgcgac cgtggactac
     1081 gtgggcaact cgtccatgga catcacggtc gaggtctacg ccgagaaggt gagcaccggg
     1141 gagcggagcc acaccaacac cgcacacgtg gtcttcgtcg cgatcgatgg agaggggaag
     1201 ccccggcggg tgccgcgcct cgtgccggag acggaggagg agcgggagcg ctatgcccgg
     1261 gcggaggaac accgccaccg gcagcagcag cagcggcgga agtgaccctg gccggcgtca
     1321 ccctcgtcct gagtggaggc ggcgccaagt ccgcggctca catcggcgcc gcgcgcgcgc
     1381 tcgcggaggc cggcctgctc cccctccgct acgtggccac gtccatgggg gccgtcatcg
     1441 ccgcggcgct ggccggcggc gcggaccgcg accggctgct ggccgggctc ggcgaggtgg
     1501 ggcggaccgg agtggtgaag gatccactcg cgttcatcag gggcctcttc gcgcgctcgc
     1561 tgctccggcc ggcgccgttc cgggaggcgg tgggccgcct ggtgcccgcc cggcggttcg
     1621 accagctcgc ggtgccggtt acggttaccg tcaccgacct cgataccggc cagctgctcc
     1681 tcttcggcgc cggcggggaa gacgccccgc tgctcgatgt cctctgtgcc agctgcgcgc
     1741 tgccgctgta ctacccgccc gtgtccctcg ggggccggcg ctgcggcgac ggcggcctcc
     1801 gcggtccgtt gccgctcgag gtcgcggccg ctttcgcgcg ggagacggtc gtggcggtgg
     1861 acgtcggccc gggcttcgac gtgtcggagc cgccccctcc gggcgccccg ccggtggtgc
     1921 gggcgcacga tgacgcggtc ggcgcgctca tggcccaggc gacggccgcc cagctcgcgc
     1981 tctggcgggg agacgcctcc cgcccgccgc tcatctatgt ccggccgaag gtcgagcgcg
     2041 ccgccacctt ccgggtggac cgggtgcggc agtacgccga agacggctac gtcgcggcgc
     2101 gcgaggcgct cgcgagcatg cctcggcctt gaccctccac tcgcaggggc caaattcacc
     2161 agcatgaaag cctcggaagc gatggtggcg gatccgcacg tcgcggtggc cggcgcgatg
     2221 gccagcgaag tggcgatcat gctcaagacc cggaacatct cggtggtccc ggtggtggac
     2281 gatcaccgca cccgccgctt cctcggcacc ctgagcgacc gcgacctggt gacccggtgt
     2341 ctcgccgagg ggaagcaccc gtggcacacc cgggccgact cgctgatgcg caccaactcg
     2401 ccggtggtgg tccccgagca ggagctcgag ggctatacca tccgcatgga cctcgacccg
     2461 aacgagtcgc accttcgacc gaccatcaca gtggtggacg gggaccacag ggtggtaggc
     2521 ttcatcagcc acccggagca ggtggcggga atcgagatcg tctgggggtg atgcccatgc
     2581 ccgagttcaa gctgttcagt ctccaggagg ccgagcgcac gctgccgctg gtgcgccgga
     2641 tcgtgcagga cctcacgctg gagtatccgg cctggcgggc ggcggtggcc cgattcgagc
     2701 tgctcaccgg cggtgcccgt gccgactggg gcgagaccgg cgagctgctg gccgcgcgcg
     2761 aggacgtgac gcgccacgcc gaccggatca accgctacct ccaggaattg gaggcggtgg
     2821 ggtgcgtgtt caagggattc gacgcgggcc tggtggactt ctactccctg cgcgaggacc
     2881 ggcccatctt cctctgctgg aggctgggcg aagagcggat cacccactgg cacgagatcg
     2941 acgccggctt ctccggccgc cagccgatcg acggtgcgat cctctccgcg acggcctcgt
     3001 gatccggctc tggctccttc tgcacatcct cggcttcacc ctctggatcg gcggcgcgct
     3061 cgcggccatg gtcgcgggca tcgcctccaa gcgcgaggat cgcgccgcgc tcggcgcggt
     3121 cgtgcggacc caggccgcgg tgcagaagat tctggtagcg ccgggcgcgc t
//
LOCUS       DASUYN010000003         3682 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_663036, whole genome shotgun sequence.
ACCESSION   DASUYN010000003 DASUYN010000000
VERSION     DASUYN010000003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3682)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3682)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3682
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_663036"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..372)
                     /locus_tag="VF061_00050"
     CDS             complement(<1..372)
                     /locus_tag="VF061_00050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6667911.1"
                     /translation="MWQHWSSLPLTLVVSLAALPAAAQVTVTVHGGLHLDVADGARHG
                     LDRPERPRGARRLPGEATTAGARVAVDLSQRWQLDGGVAWSRSSTWEGAVSRALPSFQ
                     AQSLFFSSTVQGWLTEPEARLG"
     gene            642..1046
                     /locus_tag="VF061_00055"
     CDS             642..1046
                     /locus_tag="VF061_00055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6667912.1"
                     /translation="MALATLLSACGFDPAGSQPWEPPAVYREWWEATEACSGLSGHFE
                     RVEWMVVPGESFECASGRCVGHWDPSHTIFLASDWTGHEMVVRHEMLHELMRRSGHPD
                     PPFGNGCPLTWETWLRSPSAGPAPATGARLLD"
     gene            complement(1057..1332)
                     /locus_tag="VF061_00060"
     CDS             complement(1057..1332)
                     /locus_tag="VF061_00060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6667913.1"
                     /translation="MDDLTMDDRFELEFEGRRYTVQRGESAEAAAEGGGAPVGRLAWY
                     ITLGPKAITQLPARPGESDHALRDRIRRWLVEHPEMPGSEDITLGGG"
     gene            complement(1374..1829)
                     /locus_tag="VF061_00065"
     CDS             complement(1374..1829)
                     /locus_tag="VF061_00065"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF013782.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016790 - thiolester hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEX6667914.1"
                     /translation="MSRVRIFSKRFAVPAEAIDVQGHVNNLAYVGWMQDVAIEHSAAV
                     GWPMRRYLDLGAGWVVRSHFIEYLRPAFADEPLSAHTWVPHFDQRSTPRRYLFVRETD
                     HTVLARAETAWVFVDLASGRRRRIPPELLQAFDPVPEDDEVRRVLGLGA"
     gene            complement(1826..2194)
                     /locus_tag="VF061_00070"
     CDS             complement(1826..2194)
                     /locus_tag="VF061_00070"
                     /inference="COORDINATES: protein motif:HMM:NF014687.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF202 domain-containing protein"
                     /protein_id="HEX6667915.1"
                     /translation="MLNTEADPRVYFAAERTFLAWLRTGITVMAFGFVVARFGLFLRL
                     LRTQGGEPAAGSGVSPYVGAVLVVLGVIATAAGTHRYQEFCRRLGRSELPFPHAEVLP
                     MVLGWALAVLGVVLVGVLLV"
     gene            2311..2856
                     /locus_tag="VF061_00075"
     CDS             2311..2856
                     /locus_tag="VF061_00075"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX6667916.1"
                     /translation="MDETDSALVDLVRQGDHRAAGRLLERYLRACRAVALAVTGDEAD
                     ADDVCQDAFVAAIARIHECREPARFGGWLLQIVRNRARNLARSPAVRRAVPLDEHAPS
                     AGPSPVADVERQELRERLLAALAELPEQQREVVLLHDLEGWKHREIGERLGLPEGTVR
                     SHLHHARRRLRQILGRGDLLT"
     gene            2853..3212
                     /locus_tag="VF061_00080"
     CDS             2853..3212
                     /locus_tag="VF061_00080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6667917.1"
                     /translation="MNDPDRIDFSAIDPGRDPERWARLVAATRLRVEGALKGLAAAPS
                     PLDLVAGWFRPILVAAVLVAVLLGTVRLLVGSRSATLSDASEARRLAALSGESLGRGL
                     APTGSQLLVALRSRNAP"
     gene            3209..3658
                     /locus_tag="VF061_00085"
     CDS             3209..3658
                     /locus_tag="VF061_00085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6667918.1"
                     /translation="MSRIPGGQAVKARWAAITPRRKALLALLLVFATGLGVGALMEDI
                     VDEIERPFFAADHDDEDDGLTEESLLERLDLTAEQRVQIERAFEAREDRLEAYWDAHL
                     SELESVIDSSRQDIRAVLTPDQRAVYDSQLGRLRLQSRRELEADDDD"
BASE COUNT          542 a         1345 c         1302 g          493 t
ORIGIN      
        1 gcccagccgc gcctcgggct cggtgagcca cccctgcacc gtgctggaga agaacagcga
       61 ctgggcctgg aaggagggca gcgcgcggct cacggcgcct tcccaggtac tgctcctcga
      121 ccacgcgacg ccgccgtcga gctgccaacg ctgcgagaga tccaccgcga ccctggctcc
      181 ggccgtggtc gcctcgccgg gcagccgccg cgcgccgcgg ggccgctcgg gccggtcgag
      241 cccgtgtcgc gcgccatcag cgacgtccag gtgcagccca ccgtgcaccg taaccgtgac
      301 ctgggcggcg gcaggaagag ccgcgagcga gacgacgagt gtgaggggaa ggctcgacca
      361 gtgctgccac atcttgcacc tccgagtgcg gcgccgggcc gccgacggac accccggaaa
      421 cttcgcaggg acgcggcgcc caagccagag ggagcgcggc ggtcccggac ccgcctgccg
      481 ggcgatgcgg aaacctcttg caactcgaca agggggacgg cgcacccgcc tccccgagca
      541 ccagcctgcg ccttgcccaa caagagcttg cgtcggcgtc cccggcgggc acgtcgattg
      601 cccacggcag agtcgtgcgc tcccgcctcc ggtctcccgc cgtggctctg gccaccctgc
      661 tctccgcctg cggcttcgat cccgcgggaa gccagccgtg ggagccgccg gcggtctacc
      721 gggagtggtg ggaggccacc gaggcctgct cggggctgag cgggcacttc gagcgcgtcg
      781 agtggatggt cgtgccgggg gagagcttcg agtgcgccag cggtcggtgc gtgggtcact
      841 gggacccgag ccacaccatc ttcctcgcct ccgactggac cggtcacgag atggtggtgc
      901 gtcacgagat gctgcacgag ctgatgcggc gcagcggcca ccccgatccg cccttcggga
      961 acggctgtcc cctcacctgg gaaacctggc tgcgcagccc gtccgcaggc cccgccccag
     1021 cgaccggcgc cagactgctc gactgaggcg gccgcctcag cctcctccca gagtgatgtc
     1081 ctcgctgccc ggcatctccg gatgctcgac cagccatcgc cggatccggt cccgcagcgc
     1141 gtggtcgctc tcgcccggtc tcgcgggaag ctgggtgatc gccttggggc cgagcgtgat
     1201 gtaccaggcc agccgaccca ccggcgcgcc gccgccttcc gcggccgcct ccgcgctctc
     1261 gccccgctgc accgtgtagc gccggccctc gaactccagc tcgaatcgat cgtccatcgt
     1321 cagatcgtcc atcgtcagag tgtccgcctg ctctcaggtg aaggcgccca ggctcacgcg
     1381 ccgagaccga gcacccggcg gacttcgtcg tcctcgggca cggggtcgaa ggcctgcagc
     1441 agctcgggcg ggatcctccg gcggcggccg ctggcgagat ccacgaagac ccaggcggtc
     1501 tcggcccggg ccagcacggt gtggtcggtc tcgcggacga agaggtagcg gcggggcgtg
     1561 gagcgctgat cgaagtgggg cacccaggtg tgcgcgctca ggggctcgtc ggcgaacgcg
     1621 ggccggaggt actcgatgaa gtgggatcgc accacccaac ccgcgcccag gtccaggtag
     1681 cgtcgcatgg gccagccgac cgcggccgag tgctcgatcg ccacgtcctg catccagccc
     1741 acgtacgcca ggttgttgac gtgaccctgc acgtcgatcg cctcggccgg cacggcgaac
     1801 cgcttggaga agatacggac ccggctcaca ccagcagcac acccaccagc accacaccga
     1861 gcaccgccag tgcccacccc aggaccatcg gcaggacctc cgcgtgcggg aatgggagct
     1921 cgctgcgtcc cagccggcga cagaactcct ggtagcggtg ggtcccggcc gcggtcgcga
     1981 tgacgccgag aaccacgagc accgcgccca cgtacggcga caccccgctg ccggccgccg
     2041 gctcaccgcc ctgggtcctg agcagccgca ggaagaggcc gaagcgcgcc accacgaagc
     2101 cgaaggccat gaccgtgatg ccggtgcgga gccaggccag aaacgtgcgc tcggcggcga
     2161 agtagactct cgggtcggct tcggtgttga gcatcgggtc cgccctctca ggccctcgct
     2221 tcgcgtgaac cgctcggtcc gaccatactc ggatggaggc cccggcggaa ggtcaacgtt
     2281 ttctcacccc cgcgtgtcag gtgatcggcc atggacgaga cggacagtgc actcgtggac
     2341 ctcgtgcggc agggagacca ccgcgccgcc ggacgcctgc tggagcgcta cctgcgcgcc
     2401 tgccgggcgg tcgcgctcgc cgtcaccggc gacgaggccg acgccgacga cgtctgtcag
     2461 gacgcgttcg tggcggccat cgcgcggatt cacgaatgcc gcgagcccgc gcgattcggc
     2521 ggctggctgc tccagatcgt tcgcaaccgg gccaggaacc tggcgcgctc accagccgtg
     2581 cggcgcgccg tcccgctgga cgagcacgcg ccgtcggcgg gaccgtcgcc cgtggccgac
     2641 gtggagcggc aggagctcag ggaacggctg ctcgctgccc tcgccgagct cccggagcag
     2701 cagcgggagg tcgtcctgtt gcacgacctg gagggctgga agcaccgcga gatcggcgag
     2761 cggctggggc ttcccgaggg tacggtccgc tcccacctgc atcatgccag gcgccgcctg
     2821 cggcagatcc tgggacgagg agacttgctg acatgaacga ccccgatcgt atcgatttct
     2881 cagcgatcga ccccgggcgg gatccggagc gctgggcccg cctcgtggcg gcgacccgcc
     2941 tccgggtcga gggcgcgctc aagggcctgg ccgccgcgcc atccccactg gacctggtcg
     3001 ccggctggtt tcggcccatt ctcgtcgccg ccgtgctggt ggccgtgctg ctcggcacgg
     3061 tgcgactcct ggtcggcagc cggagcgcga cgctctcgga tgcctcggag gcccggcgtc
     3121 tggccgcgct gagcggcgaa tcgctcgggc ggggcctggc accgacgggg tcgcagctcc
     3181 tggtggcact ccgttcccgg aacgccccat gagccggatc cccggggggc aggcggtgaa
     3241 agcgcgctgg gccgccatca ccccacgccg caaggcgctg ctcgcgctgc tcctggtctt
     3301 cgccaccggc ctcggcgtag gagcgctgat ggaggacatc gtggacgaga tcgagcggcc
     3361 gttcttcgcc gccgaccacg acgatgagga cgacgggctc accgaggaga gcctgctgga
     3421 gcgcctcgat ctgaccgccg agcagcgggt gcagatcgag cgggcgttcg aggccaggga
     3481 agaccggctg gaggcgtact gggacgccca cctctcggag ctggagagcg tgatcgattc
     3541 cagccggcag gacatccgcg cggtgctgac gcccgaccag cgcgcggtct acgacagcca
     3601 actgggccgg ctgcgcttgc agtcgcgccg tgaactcgag gcggacgacg atgactgacg
     3661 caccgtaatc cgctgacccc gg
//
LOCUS       DASUYN010000004         2132 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1544823, whole genome shotgun sequence.
ACCESSION   DASUYN010000004 DASUYN010000000
VERSION     DASUYN010000004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2132)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2132)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2132
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1544823"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(203..1690)
                     /locus_tag="VF061_00090"
     CDS             complement(203..1690)
                     /locus_tag="VF061_00090"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase"
                     /protein_id="HEX6667919.1"
                     /translation="MRSGPDRVVARPRPNVLFIAVDDLRPTIGAYGDPYARTPNLDRL
                     ARSGVTFLRAYAQQALCNPSRASLLTGLRPDSIRVWDLETDFRATVPDVVTLPQHFMR
                     HGYRTVQIGKIYHNTIPDPRSWHQEIHLPGFPYDPDAVYHGRENLAIQEAQKARLIAE
                     GQQDRAIDKFGMWYLKANATESLDLPDNAYYDGAQTDRALEELAALKGRQPFFFAVGY
                     YRPHLPFNAPRKYWDLYDPDSIALAPNPEMPKGAPPAAGSNLAELRRYADFATAPEPW
                     EGRLSEADARRLKHGYYASVSYVDALVGRLLDRLDQLGLANNTIVVLWGDHAYKLGEM
                     NGWGKMSNYLIDTHSPLIIRAPGAAPAGLRLEQLVELVDVYPTLSELAGLPVPDWLQG
                     ASAVPLLQRPDRAWKRAVFSQFLRRGRWLGPDGTETMGYSMRTERFHYVAWMNWVTRR
                     ITARELYELDGDPAETVNLAPGPEFRSVLEELEAQRRDGWRAAAP"
     gene            complement(1767..>2132)
                     /locus_tag="VF061_00095"
     CDS             complement(1767..>2132)
                     /locus_tag="VF061_00095"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEX6667920.1"
                     /translation="SRRDRWHVIFDIGGNRPFSRCRRVMEPDGVLVAIGGPAGRWLAP
                     AGRLIKAVMLSPLTRRRRVVPFVAKADSEGLALLAGLVERGTITPVIERRFTLSETAD
                     AVRGLGAGHVRGKVVICMR"
BASE COUNT          337 a          729 c          736 g          330 t
ORIGIN      
        1 gaaggcggaa tatgcacggc ggtcacaggt catccccgcg ggggcattcg ggatagtcag
       61 ttcaaaaata cgacccgcgt gaggatccga cgtgacggac cgcacatggc ggcgccctgg
      121 gggttccgac cgcgaagtcc aggagcccgg aggccggcgc gacagccgct cacgaaggcg
      181 gtggtaggaa cgatccgacg ggctagggtg cggccgcacg ccacccgtcg cggcgttgcg
      241 cttccagctc ctcgagcacc gatcggaact cgggcccggg tgccaggttc accgtctccg
      301 ctggatcgcc gtccagctcg taaagctcgc gggcggtgat ccgccgcgtc acccagttca
      361 tccacgccac gtagtgaaac cgctcggtcc gcatgctgta gcccatcgtt tcggtgccgt
      421 ccgggcccag ccatcggcct cggcgcagga actggctgaa gaccgcgcgc ttccaggcac
      481 gatccggccg ctgcagaagg ggtaccgcgc tggcgccctg cagccagtcg ggcaccggca
      541 gcccggccag ctcgctcagg gtcggataga cgtccaccag ctcgaccagc tgctcgagac
      601 gcagtcccgc cggcgcggcg cccggggccc ggatgatgag aggcgagtgg gtatcgatga
      661 gatagttgct catcttcccc catccgttca tctccccgag cttgtacgcg tggtcgcccc
      721 agaggaccac gatcgtgttg ttcgccaggc cgagctggtc gaggcgatcc agcagtcgcc
      781 cgaccagcgc atccacgtag ctcaccgacg cgtagtaccc gtgcttgagc cggcgggcgt
      841 cggcttcgct cagcctcccc tcccacggct ccggcgccgt cgcgaagtcg gcgtaccggc
      901 gcagctccgc caggttgctg cccgctgccg gtggagcgcc cttcggcatt tccgggttcg
      961 gcgcgagcgc gatggaatcg ggatcgtaca ggtcccagta cttccgcggg gcgttgaacg
     1021 gcaggtgggg ccggtaatac ccgacggcga agaagaacgg ctgccgccct ttgagcgcgg
     1081 cgagctcttc cagcgcccgg tccgtctggg cgccgtcgta gtacgcattg tccggcaggt
     1141 cgaggctctc cgtcgcattg gccttcagat accacatgcc gaacttgtcg atcgcgcgat
     1201 cctgctgccc ttccgcgatg agccgcgcct tctgcgcctc ctgaatcgcc aggttctcgc
     1261 gtccgtggta gacggcgtcg ggatcgtagg ggaacccggg gagatggatc tcctggtgcc
     1321 aggagcgcgg gtcgggaatg gtgttgtgat agatcttccc gatctgcacc gtgcggtagc
     1381 cgtgccgcat gaaatgctgc ggcagggtga ccacatcggg gacggtggcg cgaaaatccg
     1441 tctccaggtc ccagacacgg atcgagtccg gacgcagccc ggtcagcaga ctggcgcgag
     1501 acgggttgca cagggcctgc tgggcatagg cccgaaggaa ggtgacgccc gagcgggcca
     1561 gccggtccag gttcggcgtc ctggcgtagg ggtcgccgta cgcgccgatg gtgggccgga
     1621 ggtcgtcgac ggcgatgaag agcacgttgg ggcgtgggcg agcgacgacg cggtcggggc
     1681 ccgagcgcac cctgccgcca cggacgcgac catggcgacc acaccggcga cacggcaggc
     1741 caggcgtgac gtagcgaacc tccttgtcac cgcatgcaga ttacgacctt accgcgcacg
     1801 tgtcctgcac cgaggccccg aaccgcgtcc gcggtctcac tcaacgtgaa acgccgttcg
     1861 atcaccggag tgatcgttcc gcgctcgacc agccctgcca gcagcgcgag tccttccgag
     1921 tcggccttcg cgacgaacgg gacgacccgc cgccgccggg tgagcggcga cagcatcacg
     1981 gccttgatca gccgcccggc gggcgcgagc catcgtcccg cggggccgcc gatggcgacg
     2041 aggactccgt ccggttccat cacccgccgg cagcggctga acggccggtt tccgccgatg
     2101 tcgaagatga cgtgccaccg gtcgcggcgg ct
//
LOCUS       DASUYN010000005         2987 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_883711, whole genome shotgun sequence.
ACCESSION   DASUYN010000005 DASUYN010000000
VERSION     DASUYN010000005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2987)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2987)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2987
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_883711"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..238
                     /locus_tag="VF061_00100"
     CDS             <1..238
                     /locus_tag="VF061_00100"
                     /inference="COORDINATES: protein motif:HMM:NF019285.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="nucleoside transporter C-terminal
                     domain-containing protein"
                     /protein_id="HEX6667921.1"
                     /translation="AQFASQLAADVELSPRSMVILTYALLGFANFSSIAIQIGGIGGL
                     APERRSEIARYGLRAMIAGNLAAFTSASIAGMLV"
     gene            235..1098
                     /locus_tag="VF061_00105"
     CDS             235..1098
                     /locus_tag="VF061_00105"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: protein motif:HMM:NF006054.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004731 - purine-nucleoside phosphorylase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HEX6667922.1"
                     /translation="MTAAARANAIEAAARFLGRRLERVPEIAIVLGSGLGSLASRLQD
                     AQEVPYPEIPGFPRTTVVGHEGRLVAGTLGGTPVLMQSGRFHLYEGHSADTVALPVRT
                     MATLGVRTLLLTNAAGGIRRTFSRGALMMIADHVNLTFRSPLIGPLLPGEERFPDMSE
                     PYDAGLRARAREVARARGIALEEGVYLQLLGPAYETPAEVRMVERLGADAVGMSTVVE
                     VIAARARGMRCLAFSTITNPAAGITGERLSHAEVMEVAARVSGDLERLVEGVVSSREQ
                     VATRETASSRG"
     gene            complement(1084..1878)
                     /gene="thiD"
                     /locus_tag="VF061_00110"
     CDS             complement(1084..1878)
                     /gene="thiD"
                     /locus_tag="VF061_00110"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008902 - hydroxymethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0008972 - phosphomethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HEX6667923.1"
                     /translation="MRIALTIAGSDSGGGAGIQADLKTFQQYGVFGTSVIVALTAQNT
                     RGVRAVEKVSEAMVAAQLSALAEDLPPTALKTGMLADVALARLVGKTIREQGWAPLVV
                     DPVMVSTSGHRLLTPEAEDVVRESLLPLAALVTPNLDEAAILTGRAVHDETSMARAGE
                     TLVSFGAGAALVKGGHLPGGEITDLLVTPGGVRTFRRQRVETSSTHGTGCTLSAAITA
                     GLALGRDLETAVADALDFVHRAIAAAPGLGGGYGPLNHTVPALPPG"
     gene            1915..2673
                     /locus_tag="VF061_00115"
     CDS             1915..2673
                     /locus_tag="VF061_00115"
                     /inference="COORDINATES: protein motif:HMM:NF012797.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0001510 - RNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HEX6667924.1"
                     /translation="MIRDLHRRRGRERRGLALAEGVRLVEEALAAELPLRGAAISPAL
                     EATTRGRALKTALERRAVRIEPVSESELAALADTEHPQGVVAVIEPRRWSLDDIAPAP
                     GRPVLVLDGVQDPGNVGTILRSALGLGAAGVVALKGTAELTGPKVVRGSMGALFRLPA
                     VPSDAGEFLTWARERGLELWTAAADGDPLAPGQARGQAGAVALVLGNEGAGVSPVLEA
                     AASRRVAIRLMPGAESLNVAIAAAILLREVARVD"
     gene            2663..>2987
                     /locus_tag="VF061_00120"
     CDS             2663..>2987
                     /locus_tag="VF061_00120"
                     /inference="COORDINATES: protein motif:HMM:NF018460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HEX6667925.1"
                     /translation="MWTDAGPAPWAVVAWFALLGAALGSFLNVCILRWGAEPKQSVMH
                     PPSRCPSCGHAIRWHENIPVLSWLVLRGKCSGCGARISPMYPAIEAGTALIWGGSVAL
                     FGLNPG"
BASE COUNT          369 a         1034 c         1166 g          418 t
ORIGIN      
        1 cgcgcagttc gcgagccagc tggcggccga cgtcgagctc tcaccccgga gcatggtcat
       61 cctgacctac gcgctgctcg gcttcgccaa cttctcctcc atcgcgatcc agatcggcgg
      121 catcggcggg ctcgcccccg agcggcgcag cgagattgcc cgatacgggc tccgggccat
      181 gatcgccggc aacctcgccg ccttcacctc ggcctccatc gcgggaatgc tggtgtgacg
      241 gcggcggcgc gggcgaacgc gatcgaggcg gcggcccggt tcctggggcg gcggctggag
      301 cgggtgccgg agatcgcgat cgtgctcggg agcgggctcg gtagcctggc ctcgcggctg
      361 caggatgcgc aggaagtgcc ctacccggag atccccggct tcccccgcac gaccgtcgta
      421 ggacacgagg gccgactggt cgccggtacc ctgggcggca cgccggtgct gatgcagagc
      481 ggccggttcc acctgtacga gggccattcc gcggacaccg tcgcgctgcc ggtccggacc
      541 atggccacgc tgggggtgcg cacgctcctc ctcaccaatg ccgcgggcgg catccggcgc
      601 accttctcgc gcggcgccct gatgatgatc gcggaccacg tgaacctcac gttccgcagt
      661 ccgctgatcg gccccctgct gccgggcgag gagcggttcc ccgacatgtc ggagccctac
      721 gatgccggcc tgcgggcccg ggcccgcgag gtcgcccggg cgcggggcat cgcgctggaa
      781 gagggggtct atctccagtt gctggggccc gcctacgaga cgccggccga ggtgcggatg
      841 gtggagcggc tcggcgccga tgcggtgggc atgtccacgg tggtcgaggt catcgcggcg
      901 cgcgcgcggg ggatgcggtg cctggcgttc tcgaccatca ccaacccggc ggcgggcatc
      961 accggcgagc ggctctcgca cgcggaggtg atggaagtgg cggcgcgggt gtcgggagat
     1021 ctggagcggc tggtggaagg cgtggtgtcg tcccgggagc aggtggcgac tcgggaaacg
     1081 gcctcatccc gggggtagcg ccggcaccgt atggttcagc ggtccatacc ctccgccgag
     1141 ccccggcgcc gcggcgatgg cgcgatgcac gaagtccagc gcgtccgcga ccgccgtctc
     1201 caggtcccgg ccgagggcga ggcccgcggt gatggcggcg gagagcgtgc acccggtgcc
     1261 gtgggtggag ctggtctcca cccgctgccg ccggaaggtg cggacgccgc cgggcgtcac
     1321 caggaggtcg gtgatctccc cgcccggcag gtgtccgccc ttcaccagcg cggccccggc
     1381 gccgaagctc accagggtct cgccggcccg agccatcgag gtctcgtcgt ggaccgcgcg
     1441 gccggtgagg atggccgcct cgtcgaggtt gggggtgacc agcgccgcga gcgggaggag
     1501 gctctcccgc acgacgtcct cggcttcggg cgtcaggagc cggtggccgg aggtggagac
     1561 catgaccgga tccaccacca gcggcgccca gccctgctcc cggatcgtct tgccgaccag
     1621 ccgggcgagc gcgacgtccg cgagcatgcc ggtcttgagg gccgtgggcg gcaggtcctc
     1681 cgccagcgcg gagagctgcg ccgccaccat ggcctcggag accttctcca ccgcgcgcac
     1741 tccgcgagta ttctgggcgg tgagagccac gatgaccgag gtgccgaaga cgccgtactg
     1801 ctggaaggtc ttgaggtcgg cctggattcc ggcgccgccg ccggagtccg atcccgcgat
     1861 ggtgagcgcg attctcatgg ggcaccgggg gccatgacga gtcctctcag gacgatgatc
     1921 cgcgacctcc accgccggcg cggccgcgag cggcgtgggc tcgcgctcgc cgagggcgtg
     1981 cggctggtgg aagaggcgct cgccgccgag ctgccgctcc ggggcgccgc gatctcgccc
     2041 gcgctggaag ctaccacccg cgggagggcg ctcaagaccg cgctggaacg gcgcgcggtc
     2101 cggatcgagc cggtgagcga gagcgagctg gccgcgctcg ccgacacgga gcatccgcag
     2161 ggggtggtgg ccgtgatcga gccccgccgc tggagcctgg acgacatcgc gcccgcgccg
     2221 ggccggcctg ttctggtgct cgacggcgtg caggacccgg ggaacgtcgg cacgatcctc
     2281 cgctcggcgc tcggcctggg cgcggccggg gtagtcgcgc tgaaagggac ggcggagctc
     2341 acgggaccca aagtggtgcg gggcagcatg ggagcgctgt tccgcctgcc ggccgtgccg
     2401 agtgatgcgg gggagtttct cacctgggcg cgggagcgtg gcctggagct ctggacggcc
     2461 gcggccgacg gcgacccgct cgcgccgggc caggcccggg ggcaggccgg cgcggtggcc
     2521 ctggtgctgg gcaacgaagg ggcgggcgtg agcccggtgc tggaagcggc ggccagccgc
     2581 agggtcgcca tccggctgat gccgggcgcg gagtcgctca acgtggcgat cgccgcggcc
     2641 atactgcttc gagaggtcgc gcgtgtggac tgatgcgggt ccggctccgt gggcggtcgt
     2701 cgcctggttc gcgctgctcg gcgcggcgct ggggagcttc ctcaacgtct gcatcctgcg
     2761 gtggggggcg gagccgaagc agtcggtgat gcacccgcca tcccgctgcc cctcgtgcgg
     2821 ccacgcgatc cgctggcacg agaacatccc ggtcctctcc tggctcgtcc tgcgggggaa
     2881 gtgctccggc tgcggcgcac ggatctcgcc gatgtatccg gccatcgagg cggggaccgc
     2941 gctcatctgg ggcgggtcgg tggcgctgtt cggcctgaat cccggcg
//
LOCUS       DASUYN010000006         2493 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1765706, whole genome shotgun sequence.
ACCESSION   DASUYN010000006 DASUYN010000000
VERSION     DASUYN010000006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2493)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2493)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2493
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1765706"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..495
                     /locus_tag="VF061_00125"
     CDS             <1..495
                     /locus_tag="VF061_00125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6667926.1"
                     /translation="AIDGFEAALGSLLEGEGESLLERVVDRLGESVETGHPALTRVWP
                     APERVAQEGVGALLPLGVPRARAEAIVTVARAVAGGALRLQPGSDVVATHRALLEMAG
                     VGERLATMIVMRALYWPDAFPTADPALQRATGASGRRELRERAEPWRPWRAYAAQHLW
                     LQEP"
     gene            complement(492..1415)
                     /locus_tag="VF061_00130"
     CDS             complement(492..1415)
                     /locus_tag="VF061_00130"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HEX6667927.1"
                     /translation="MATTSRLLTNTAAVALLLAACGEERPPREFAASSAFGYIERQLE
                     FGFRIPGTEGHGRMAEWLDSMSRARADSVIVQRWTHVTVDGDSLPLQNVIARYNPAAE
                     KRILFLAHWDTRPRADGPRSPDSTVAVTGANDGASGVALLLGVMDVLQRAPPPPSLGV
                     DILFTDGEDYGEFVEPYADVLIGARHYAANQPPGPKPLYAVLFDLVADKDLQIYQEGN
                     SVTGAPEVVNLVWEAARDLGYGRTFVDTPKHVLTDDHIELQKVGIRAIDVVDFDYPAH
                     HTPFDTIDKVSAESLQIVGDVAVALVRRESR"
     gene            complement(1451..>2493)
                     /locus_tag="VF061_00135"
     CDS             complement(1451..>2493)
                     /locus_tag="VF061_00135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6667928.1"
                     /translation="DPVRADGDNGAFILPKTLNNSRANEVGVAVDLGQAFRLVSGDSG
                     TLGKLFGRVRPLDLSTRLTRTSTFDLTAFEPSLKYQLAIGSLENFLQQRDAPALGASE
                     ARTANLSSGADLPLGFSFTLSHALTRTTRFQRVGSSFIPTETKQREWPVGNVRWCHTF
                     RGGPLSLLALGTGFRRREGNSVQGGRTGGVGVQSAIESSTITPDAQINFRNGVSVTLG
                     YSELDQSSLSNGNNTQLDQNDLSGSLSYTFRLPRSISRLRKQVRTSLNVTSTDALTCL
                     EQRGQEDCIVISDVSRYVVRGGLDTDLLQTVSAGLQVGYSLNDARHLSRRTSQISVLA
                     SFQLSLFAGDYR"
BASE COUNT          367 a          827 c          919 g          380 t
ORIGIN      
        1 gcgatcgacg gattcgaggc agcgctcggc tcgctgctgg agggcgaggg tgaatccctg
       61 ctggagcggg tggtggatcg gctcggcgag tcggtcgaga ccggtcatcc ggccctgacg
      121 cgggtgtggc ccgcgccgga gcgcgtggca caggagggcg tgggggcact cctgccgctg
      181 ggcgtaccgc gcgcgcgggc ggaggcgatc gtcacggtcg cgcgggcggt ggcgggcggc
      241 gcgctccggc tccagccggg cagcgacgtg gtggcgaccc accgcgcgct gctggagatg
      301 gcaggcgtgg gcgagcggct ggcgacgatg atcgtgatgc gcgcgctcta ctggccggat
      361 gccttcccca ccgccgaccc ggcgctgcag cgcgccacgg gagcctccgg tcgccgggag
      421 ctgcgggagc gggcggagcc ctggcgaccc tggcgggcct acgcggcgca gcacctgtgg
      481 ctgcaggagc cctagcgaga ctcccgccgc accagtgcca ccgctacgtc ccccacgatc
      541 tgcagactct ccgcgctcac cttgtcgatg gtatcgaacg gcgtgtggtg cgcgggatag
      601 tcgaagtcca ccacgtcgat cgcccggata ccgaccttct gcagctcgat gtggtcgtcg
      661 gtcaggacat gcttcggcgt gtccacgaag gtccgcccgt agcccagatc gcgcgccgct
      721 tcccagacca ggttgaccac ctccggggcg ccggtgaccg agtttccttc ctggtagatc
      781 tgcaggtcct tgtccgccac caggtcgaac agcacggcgt agagcggctt cggcccgggc
      841 ggctggttgg cggcgtagtg tcgcgccccg atcagtacat ccgcgtaggg ctcgacgaat
      901 tcgccgtagt cctcgccgtc ggtgaagagg atgtccacac ccaatgacgg cgggggcggg
      961 gcccgctgca gcacgtccat gaccccgagc aggagcgcca ctcccgacgc cccgtcgttg
     1021 gcgccggtca ccgcgacggt cgaatcgggc gagcgcgggc cgtcggccct gggccgggtg
     1081 tcccagtgcg cgaggaagag gatgcgcttt tccgcggcgg gattgtagcg ggcgatcacg
     1141 ttctgcaggg gcagggagtc gccgtccacg gtgacgtggg tccaccgctg cacgatgacc
     1201 gagtcggccc gcgcgcgtga catgctgtcg agccactccg ccatgcggcc gtgaccttcg
     1261 gtgccgggaa tccggaagcc gaactcgagc tgccgctcga tgtagccgaa cgcggacgat
     1321 gcggcgaact cacgcggggg ccgctcctcg ccgcaggcgg cgagcaggag cgcgaccgcc
     1381 gccgtgttgg tgaggagtct cgaggtggtt gccatggcgc atggacgaaa gcccccgccc
     1441 cgtcgccttg tcaacgatag tcgccggcga agagcgaaag ctggaaggag gccaggaccg
     1501 agatctggct ggtgcgccgg ctgaggtgcc gggcatcgtt cagcgagtag ccgacctgga
     1561 gcccggcgga gaccgtctgc agcaggtcgg tgtccagccc gccgcgcacc acgtagcggg
     1621 acacgtcgga gatgacgatg cagtcctcct ggccgcgctg ctccaggcag gtgagcgcgt
     1681 cggtggacgt gacgttgagc gaggtccgca cctgcttccg gagccggctg atcgagcggg
     1741 gcagccggaa ggtgtagctg agcgatccgc tgaggtcgtt ctgatcgagc tgggtgttgt
     1801 tgccgttgga gaggctgctc tggtccagct cgctgtagcc cagcgtcacc gagacaccgt
     1861 tgcggaagtt gatctgcgcg tccggggtga tggtggagga ctcgatcgcg ctctgcacgc
     1921 ccacgcctcc cgtccgtccg ccctgcaccg agttgccctc gcgccgccgg aaccccgtcc
     1981 ccagcgcgag caggctcagc ggcccgccgc ggaaggtatg gcaccagcgg acgtttccca
     2041 ccggccattc gcgctgcttc gtctccgtgg gaatgaacga gctgcccacc cgctggaaac
     2101 gggtcgtcct cgtgagcgca tgggacaggg tgaacgagaa cccgagcggg agatccgcgc
     2161 cgctggacag gttggcggtg cgcgcctcag aggcaccgag cgcgggagca tcccgctgct
     2221 gcaggaagtt ctccagcgac ccgatggcca gctggtactt gaggctgggc tcgaaggccg
     2281 tgagatcgaa ggtggacgtg cgggtcagcc gggtgctcaa gtccagcggc cgcacccggc
     2341 cgaaaagctt gcccagggtg ccgctgtcgc ccgacaccag gcggaaggcc tgaccgaggt
     2401 ccaccgcgac gcccacttca ttggcccgcg agttgttgag ggtcttcggc aggatgaatg
     2461 ccccattgtc gccatcggcc cgcaccggat ccc
//
LOCUS       DASUYN010000007         4048 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_663927, whole genome shotgun sequence.
ACCESSION   DASUYN010000007 DASUYN010000000
VERSION     DASUYN010000007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4048)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4048)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4048
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_663927"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(96..1925)
                     /gene="glmS"
                     /locus_tag="VF061_00140"
     CDS             complement(96..1925)
                     /gene="glmS"
                     /locus_tag="VF061_00140"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HEX6667929.1"
                     /translation="MCGIVGYIGPRQAAGLLLEGLRRLEYRGYDSSGIAVVNGHGLKI
                     MKAAGKLSMLEQELEAGMPGGTVGIGHTRWATHGAPTTPNAHPHTDQSGRIAVIHNGI
                     IENSAAIRKTLERRGHSFKSETDTEVLAHLVGEYYAGNLEEAVAAALREVDGAYGLAF
                     ISADEPGVLVAARKGSPLLLGVGENEWFVASDASPLLQYTRSVVYLDDGEMAVLSRDG
                     YRVRNLETTRISKPVNQIDWDLAMVERNGFAHFMLKEICEQPESLCNTLRGHLLEDEG
                     TARVSGLNLSDDQLKQVERIVITACGTSWHAGLIGEYMLEELARMPAEVEYASEFRYR
                     NPVVDNRTLVIGISQSGETADTLAAIREAKRRGARTIGLVNVVGSTIAREVDGGIYLH
                     AGPEVGVASTKAFTSQVAALALVTLRIARLRNLSILQGREFIQALRLLPDQIAGILGR
                     APEIERLADRFLRTATNALYLGRGVNFPVALEGALKLKEISYIHAEGYPAAEMKHGPI
                     ALIDENMPVVFIAPKDAVHSKIVSNIEEVKARGGKVIALINEGDTEIERLADATFTIP
                     VTLDLLTPILTSIPLQLLSYYVAVARGCNVDQPRNLAKSVTVE"
     gene            complement(1939..3318)
                     /gene="glmM"
                     /locus_tag="VF061_00145"
     CDS             complement(1939..3318)
                     /gene="glmM"
                     /locus_tag="VF061_00145"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: protein motif:HMM:TIGR03990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008966 - phosphoglucosamine mutase
                     activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HEX6667930.1"
                     /translation="MSDTLMISVSGMRGHVGTDLTPELVARHAAALGAWVRSAAPEGG
                     GRPAVVLGRDARTSGPMFARAASAGLMSVGVDVVEVGVVPTPTVQLAVEHHHAGAGLI
                     LTASHNPIEWNALKFVGPDGIFLDAAAGERVRALADQGPPRAGWDGLGEVREDREAVE
                     RHLAAILRLPVIDVTAIRARHFHVALDCVRGAGAVAMLPLLERLGCRVSGINLEPDGR
                     FPRPPEPVPENLADLGRLVRETGADLGLAVDPDVDRLAIVDGSGRPIGEDYTLAFAVR
                     AVLDGRSTPEKPPTVVVNLSTSLVVEDAARAVGATVLRAPVGEANVARAIRDRGAAIG
                     GEGNGGVMYPALHIGRDAPLGVALILHLLATSGVTVAGLVEGSPRYTIVKAKGPRSSQ
                     LGPLYQRLRKRFADAEADDRDGLRLSWADRWLHVRPSGTEPIVRLIAEAPTPSEAEAL
                     VAAGRELLQ"
     gene            complement(3332..>4048)
                     /locus_tag="VF061_00150"
     CDS             complement(3332..>4048)
                     /locus_tag="VF061_00150"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HD-GYP domain-containing protein"
                     /protein_id="HEX6667931.1"
                     /translation="SKPVVMEEVRARVDKALEKRQLVLQNRFYQKNLEGRVRELDRRN
                     KESLINGVQTLVHALEAKDAYTSGHSSRVARYALKTAVHLGYVGELLEYIRLGAELHD
                     IGKIGTREAILNKPGPLTLDEFEHIKEHTALGEKILAPFLNESPMVLRIVRSHHERVD
                     GAGFPDGLHGDRIPREARIVAVVDAFDAMTTNRAYRPSRTPTEAIAELRSCAGTHFDA
                     EVVSAFTTAFHDVTALPISR"
BASE COUNT          588 a         1450 c         1366 g          644 t
ORIGIN      
        1 atggtccgct acgagcgaca gccgtgtcac gaaacggtgt cgctccatgg atttgccaag
       61 cgcggtgggg cgaggcggcg ttatcgtttc gccggctact ccaccgtcac cgacttggca
      121 agattgcgcg gctggtccac gttgcacccg cgggccaccg ccacgtagta cgagagcagc
      181 tgaagcggga tgctggtcag gatcggcgtc agcaggtcca gcgtcaccgg aatggtgaac
      241 gtcgcgtccg ccagccgctc gatctcggtg tcgccctcgt tgatcagcgc gatcaccttc
      301 ccgccccgcg ctttcacctc ctcgatgttg ctcacgatct tcgagtgcac cgcgtccttg
      361 ggcgcgatga acaccaccgg catgttctcg tcgatcagcg cgatcggtcc gtgcttcatc
      421 tccgccgccg gatacccttc ggcgtggatg taggagatct ccttcagctt gagcgcgccc
      481 tcgagggcca ccgggaagtt caccccgcgc cccaggtaca gcgcgttggt ggcggtgcgg
      541 aggaagcggt ccgccagccg ttcgatctcc ggggcgcgcc ccaggatgcc ggcgatctgg
      601 tccggcagca ggcgcagcgc ctggatgaac tcgcgcccct ggaggatgct caggttccgc
      661 agccgcgcga tccggagggt gaccagggcg agcgccgcga cctggctggt gaacgccttg
      721 gtgctcgcca cgcccacctc ggggccggcg tgcaggtaga tccccccgtc cacctcgcgc
      781 gcgatggtgg agcccaccac gttcaccagg ccgatcgtcc gggccccgcg gcgcttggcc
      841 tcacggatcg ccgccagggt gtccgcggtc tcgcccgatt gggagatacc gatgaccagc
      901 gtgcgattgt ccaccaccgg attgcggtag cggaactccg acgcgtactc gacctcggcc
      961 ggcatccgcg ccagctcctc cagcatgtac tcgccgatga ggccggcgtg ccaggaggtg
     1021 ccgcaggcgg tgatcacgat ccgctcgacc tgcttgagct ggtcgtcgct caggttgagg
     1081 ccgctgaccc gggccgtccc ctcgtcctcg agcaggtggc cgcggagcgt gttgcagagg
     1141 ctctccggct gctcgcagat ctccttcagc atgaagtggg cgaagccgtt ccgctccacc
     1201 atcgcgaggt cccagtcgat ctggttcacc ggcttgctga tcctggtggt ttccaggttc
     1261 cgcacccggt agccgtcgcg ggagagcacc gccatctcac cgtcgtccag gtagaccacg
     1321 gagcgggtgt actgcagcag cggggaggca tcggaggcga cgaaccactc gttctcgccc
     1381 acgcccagca ggagcggcga gcccttgcgc gccgccacca gcacacccgg ctcgtccgcc
     1441 gagatgaagg ccaggccgta ggcgccgtcc acctcgcgca gcgccgcggc gacggcctcc
     1501 tccaggttgc ccgcgtaata ctcgcccacg agatgcgcca gcacctcggt atcggtctcg
     1561 gacttgaagc tgtggccccg gcgctcgagc gtcttccgga tggcggcgga gttctcgatg
     1621 atgccgttgt ggatgacggc gatgcgaccc gactggtcgg tgtgcggatg ggcgttgggc
     1681 gtggtcggcg cgccgtgggt ggcccaccgg gtgtgcccga tgccgacggt gccgcccggc
     1741 atcccggcct cgagctcctg ctccagcatg gagagcttgc ccgcggcctt catgatcttg
     1801 agcccgtggc cgttcaccac cgcgatcccg gacgagtcgt agccgcggta ctcgaggcgg
     1861 cgcagcccct ccaggaggag accggcggcc tgccggggtc cgatgtagcc tacgatgccg
     1921 cacatcgcgc catatccctc actgcagaag ttctcggccg gcggccacca gcgcctccgc
     1981 ttcggacggc gtgggggcct cggcgatcag tcgaacgatc ggctcggtac cggacggccg
     2041 gacgtggagc cagcgatcgg cccacgagag cctgagcccg tcgcggtcgt cggcctcggc
     2101 gtcggcaaag cgcttccgca gccgttggta tagcgggccc agttgcgacg atcggggccc
     2161 cttggccttc acgatggtgt agcggggcga tccttccacc agtccggcaa ccgttacccc
     2221 agacgtggca aggagatgca agatcagggc cacccccaga ggcgcgtcgc ggccgatatg
     2281 aagggcggga tacatcactc cgccgttccc ttcgccaccg atagcggccc cgcgatcgcg
     2341 tatggcacga gccacgttgg cctcgcccac cggggcgcgc agcaccgtgg cccccacggc
     2401 cctggccgca tcctcaacca ccaggctggt cgaaaggttc acgaccaccg taggaggttt
     2461 ctccggtgtg ctgcgtccat ccaacacagc gcggaccgcg aacgccagcg tgtagtcttc
     2521 gccgatcggt cggccggacc cgtccacgat ggccaggcgg tcgacgtccg ggtccaccgc
     2581 caagccgaga tcggcgccgg tttcccgaac cagccgcccg agatcggcca ggttctccgg
     2641 caccggctcc ggcggccgtg gaaagcggcc gtcgggctcc aggttgatcc cgctcacccg
     2701 gcagcccagc cgctccagca gtggcagcat cgccaccgcc cccgcgcctc ggacgcagtc
     2761 gagggcaaca tgaaagtggc gggcccggat ggcggtaacg tcgatcacgg ggagccggag
     2821 gatggccgcg aggtgacgct ccacggcctc ccggtcctcc cgcacttcgc cgaggccgtc
     2881 ccagccggcg cgcggcggtc cctggtcggc cagcgcacga acccgctccc cggcggccgc
     2941 gtcgagaaag atgccgtcgg gcccgacgaa cttgagcgcg ttccactcga tcgggttgtg
     3001 actggccgtg aggatcaggc ccgcgcccgc gtggtggtgc tccacggcga gctgcaccgt
     3061 gggcgtcggc accacgccga cctccacgac gtccacgcct accgacatca gacccgccga
     3121 tgccgcccgg gcgaacatcg ggccgctggt tcgggcgtcg cgaccgagca ccacggccgg
     3181 gcggcccccc ccctccggcg ccgccgatcg cacccacgcg cctagcgccg cggcgtgacg
     3241 cgccaccagc tcgggcgtga gatcggtgcc cacgtgtccc cgcatcccgg agacgctgat
     3301 catcagggta tcggacatgg cggggggccg ctcagcggct gatgggaagc gcggtcacgt
     3361 cgtggaacgc ggtggtgaac gcgctcacga cctcggcgtc gaagtgcgtg cccgcgcagc
     3421 tccgcagctc ggcgatggct tcggtggggg tgcgcgacgg acggtaggcc cggttggtgg
     3481 tcatcgcatc gaaggcgtcc accaccgcga cgatccgggc ctcgcggggg atccggtcgc
     3541 cgtgcaggcc gtcgggaaag ccggcgccgt ccacccgctc atggtgcgag cgcacgatac
     3601 gaagcaccat gggactctcg ttgaggaacg gcgccaggat cttctccccc agggcggtgt
     3661 gctccttgat gtgctcgaac tcgtcgagcg taagcgggcc cggcttgttc aggatggcct
     3721 cgcgggtgcc gatcttcccg atgtcgtgca gctcggcgcc gagtcggatg tactccagca
     3781 gctcgccgac gtagcccagg tgcacggcgg tcttcagggc gtagcgcgcc acccgcgaag
     3841 aatggccgct ggtatacgcg tccttcgctt ccagcgcgtg caccagggtc tgcacgccgt
     3901 tgatcagcga ttccttgttc cggcggtcca gctcccggac ccggccctcg aggttcttct
     3961 ggtagaaccg gttctggagc acgagctggc gcttctccag cgccttgtcc acccgcgccc
     4021 ggacctcctc catgaccacc ggcttcga
//
LOCUS       DASUYN010000008         2497 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1325566, whole genome shotgun sequence.
ACCESSION   DASUYN010000008 DASUYN010000000
VERSION     DASUYN010000008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2497)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2497)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2497
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1325566"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1298
                     /gene="selA"
                     /locus_tag="VF061_00155"
     CDS             <1..1298
                     /gene="selA"
                     /locus_tag="VF061_00155"
                     /EC_number="2.9.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004125 - L-seryl-tRNA(Sec) selenium
                     transferase activity [Evidence IEA];
                     GO_process: GO:0016260 - selenocysteine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HEX6667932.1"
                     /translation="ELLHTAPRVAVVDAVRESLAAARTRRAGPPESWAADVRERLAER
                     TRPSLRPLLNATGVVLHTTLGRAPLARAAVSAMAAVAGGYSNLELDLDTGTRGSRSDH
                     CRDPLRAVTGGEDALAVNNAAGGLLLALAALAADREVLISRGELIEIGGSFRIPDILE
                     RSGARLREVGTTNRTHLDDYRRAIGSGVAAVLTVHRSNFEQRGFVTTPDPADVAALAH
                     EAGVPYLVDVGSGLLLSLEPWGLQGEPRVQEALAAGADLVLFSGDKLLGGPQAGCIVG
                     GRQALARCRQHPIARAVRADKMTLAGMEATLALYRDPARAVAEIPVLRMLTLGLEELT
                     PRAEHLAVLCPAGLGASLVPGESAVGGGAFPGAVLPTMLVALDAGALGPDSLALRLRV
                     GEPAVVARVGGDRVLLDPRTLPEESFPAVAAALVEALRE"
     gene            1295..1846
                     /locus_tag="VF061_00160"
     CDS             1295..1846
                     /locus_tag="VF061_00160"
                     /inference="COORDINATES: protein motif:HMM:TIGR01662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEX6667933.1"
                     /translation="MTGRGAVFLDRDDTIIADTGYIADPAAVRLLPGAAGAIARLNRA
                     GLPAIVITNQSGIARGLITEAAYLAVARRLDALLAAEGARLDAHYHCPHHPDFTGPCE
                     CRKPGPLLYRRAAEEHGLQLDRCWWVGDRMRDVVTAERFGGRGVLLDPSPTGESGRSS
                     TPFPLVRDLAAAVDLILEDPPAH"
     gene            1907..>2497
                     /gene="purN"
                     /locus_tag="VF061_00165"
     CDS             1907..>2497
                     /gene="purN"
                     /locus_tag="VF061_00165"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004644 - phosphoribosylglycinamide
                     formyltransferase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HEX6667934.1"
                     /translation="MSMHVAVAVSGRGSNLDALLRALGPDAPARVVLVLSDRGEAPAL
                     ERAAGRGIPTMALRDPSDGREWLAAMERHGIDLLVLAGYLKLVPADVVARYRGRILNV
                     HPALLPAFGGKGMYGRRVHEAVLASGARESGATVHLVDEVYDRGAILGQARVPVLPGD
                     DPDTLAARVLEVEHRLLPAVVLAAAVAGRPVPIPEPV"
BASE COUNT          293 a          926 c          932 g          346 t
ORIGIN      
        1 gggagctgct ccacaccgcg ccgcgcgtcg cggtcgtgga cgccgtgcgc gagtcgctcg
       61 ccgccgccag gaccaggcgg gcggggccgc ccgagagctg ggcggccgac gttcgcgagc
      121 ggctggccga gcgcaccagg cccagcctcc gcccgctgct caacgccacc ggcgtagtgc
      181 tgcacaccac cctcggccgc gcgccgctcg cgcgcgcggc ggtgagcgcg atggcggcgg
      241 tcgccggggg gtacagcaat ctcgagctgg atctcgacac cgggacgcgc gggagccgga
      301 gcgatcactg ccgtgatccg ctccgcgccg taaccggcgg cgaggatgcg ctggcggtga
      361 acaacgccgc cggcgggctc ctcctcgccc tcgccgcgct cgcggccgat cgggaggtcc
      421 tgatctcgcg cggcgagctg atcgagatcg gcgggtcgtt ccgcataccg gacatcctgg
      481 agcgaagcgg cgcccgactc cgtgaggtcg ggaccaccaa ccgcacccat ctcgacgact
      541 accgccgggc catcggctcc ggcgtggcgg ccgtgctcac cgtgcaccgt tccaacttcg
      601 agcagcgcgg cttcgtgacc acgcccgatc ccgccgatgt cgccgcgctg gcgcacgagg
      661 cgggcgttcc ctacctggtg gacgtcggga gcggactgct cctgagcctg gagccctggg
      721 ggctccaggg ggagccgaga gtgcaggagg ccctcgccgc cggcgccgat ctcgtgctct
      781 tcagcggcga caagctcctc ggcgggcccc aggccggctg catcgtcggg ggacgccagg
      841 cgctggcgcg ctgccgccag cacccgatcg cgcgggcggt ccgggccgac aagatgacgc
      901 tggccggaat ggaggcgacg ctcgcgctct atcgcgatcc ggcccgggcc gtggccgaga
      961 taccggtgct tcgcatgctg accctcggcc tggaggagct gactccgcga gcggagcacc
     1021 tggccgtcct ctgtcccgct gggctcggcg cgtcactggt gccgggcgag tccgccgtgg
     1081 gtgggggtgc ttttccgggc gcggtgctgc ccaccatgct ggtcgcgctc gacgccggcg
     1141 cgctcggccc cgacagcctg gccctccggc tccgggtcgg cgagcctgcg gtcgtggcac
     1201 gggtcggcgg cgacagggtc ctgctcgatc cccgcacctt gccggaggag agcttcccgg
     1261 cggtcgcggc agcgctggtg gaggcgctgc gcgagtgacc gggcggggcg cggtcttcct
     1321 cgaccgcgac gacaccatca tcgcagacac cggatacatc gccgatcccg ccgcggtgcg
     1381 cctcctgccc ggcgccgccg gcgcaatcgc ccggctcaac cgcgcgggcc tccccgccat
     1441 cgtgatcacc aaccagtccg gcatcgcgcg aggcctgatc accgaggcgg cctacctggc
     1501 ggtcgctcgt cggctggacg cgctcctggc cgccgagggt gcgcgactcg acgcgcacta
     1561 tcattgtcct caccatcccg acttcaccgg gccgtgcgag tgccgcaagc cgggccccct
     1621 gctctaccgc cgcgcggcgg aggagcatgg gctgcagctg gaccgctgct ggtgggtggg
     1681 cgaccggatg cgcgacgtcg ttacggcgga gcgcttcggg gggcgcggcg tcctgctgga
     1741 cccgtcgccg acgggcgagt cggggagatc gtcgacgccc tttcccctgg tgcgcgacct
     1801 cgcggccgcg gtggacctca tcctggaaga cccaccggcg cactgatccg aaggcgacgg
     1861 cgcgcccgct gccccgccga cccgcccccc attaccttct ccccccatgt cgatgcacgt
     1921 ggccgtcgcc gtctccggac ggggcagcaa tctcgatgcg ctgctccggg cgctggggcc
     1981 ggacgcgccg gcccgcgtag tgctggtcct gagcgatcgc ggtgaggccc ccgcactgga
     2041 gcgcgccgcg gggcgcggca tcccgaccat ggcgctgcgt gatccttccg acggccggga
     2101 gtggctggcg gcgatggagc gccacgggat cgatctgctc gtgctcgccg ggtacctgaa
     2161 gctggtgccg gccgacgtgg tggcgcgcta ccgaggccgc atcctcaacg tgcatccggc
     2221 cctgcttccc gcgttcggcg gcaaaggcat gtacggacgg cgggtgcacg aggcggtgct
     2281 ggcgagcggg gcccgggaga gtggcgcgac ggttcacctg gtggacgagg tgtacgaccg
     2341 aggcgcgatt ctcggtcagg cgcgggtccc ggtgctgccc ggcgacgatc ccgacacgct
     2401 ggccgcgagg gtgctcgagg tcgagcaccg gctgctgccg gcggtcgtcc tggccgcggc
     2461 cgtggcgggt cgccccgtgc cgattcccga acccgtg
//
LOCUS       DASUYN010000009         3527 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1546518, whole genome shotgun sequence.
ACCESSION   DASUYN010000009 DASUYN010000000
VERSION     DASUYN010000009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3527)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3527)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3527
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1546518"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            344..859
                     /locus_tag="VF061_00170"
     CDS             344..859
                     /locus_tag="VF061_00170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6667935.1"
                     /translation="MLTPRLPGGWDARLADDRLLAIYLNDHLGGSAAGRDRCRHAARR
                     YRGSALGAFLAGLLAEIEEDRATLLRLIGRVGARPSKVKQALGVAAERVGRLKPNGTL
                     GGHSPLTPFIELEALSLGVEGKRLLWEGLGGLADPRLSEFDFVELAERATAQRVGIER
                     HRLAAGRNAFG"
     gene            1141..1479
                     /locus_tag="VF061_00175"
     CDS             1141..1479
                     /locus_tag="VF061_00175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6667936.1"
                     /translation="MDPHIYCTETLNELRAADGEPAADPDGLLRWMLLTDLARQRLSE
                     DEFVAELMRLRLEATRSRRPALEAAARAVLCEWRAWAQRHAVDRGRSVSPRQLQDAGT
                     RAGLGALAGG"
     gene            2271..2492
                     /locus_tag="VF061_00180"
     CDS             2271..2492
                     /locus_tag="VF061_00180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6667937.1"
                     /translation="MDAVADGTVLRGSTDELARRLAVSARALSAALEELSALRWIVAQ
                     TEADGRLMVRWERRQYQAPVLVERRRSAT"
     gene            2725..>3527
                     /locus_tag="VF061_00185"
     CDS             2725..>3527
                     /locus_tag="VF061_00185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6667938.1"
                     /translation="MSLARRVGLTVLLAIVPLVTSWASVGAQRAGDGGPIVELAPREA
                     GLKGMVGHWWWFDAHLTRYLDAFADLGVTNVRLTTDWLQIEPEEGRRDFARTDRLFGA
                     LLARGIEPVPVFATIPVWASRNPAACRARDIDCEPDPAKLEAFERTIAELVGRYPGIT
                     RWEFWNEPEQWPGLADPSVYQRWYRAFYRAAKRANPQVRVAVGTMTGWGFLARTDPDL
                     PFDAVTMHSYAGHIGDPIQTAELEQLRAGLLARGRDVPIWLTEYGWDSH"
BASE COUNT          475 a         1225 c         1305 g          522 t
ORIGIN      
        1 ccgcgcggta ctcgcgtcgc ggcagctccg ccgaccgctc gaccggccgc gtcggcgggg
       61 ctgggaccga tcccgttggg ctgtcccctc ttggtggcac ccagtatagc cggggccgcc
      121 gcactgtcaa gtccggacga caaatctcgg cgggaaaacg accggcgggc gcttcctcgg
      181 acgcgggttc ccgttggagg gtgttcggaa tatcggcgat ctcgtcgacc tgcgcgatga
      241 gcgcctctag gcactccgcc gactcgtccc cgcgatatcg agtacactct tgagcacggt
      301 ggagaggcac ccagcagcgt tcccagctcc gagggtgccc catgtgctca ctccacgcct
      361 gccgggaggg tgggacgcgc gattggcgga cgaccggctg ctcgcgatct acctgaacga
      421 ccacctgggc gggtcggcgg ccggccgcga ccggtgccga cacgcggcgc ggcgatatcg
      481 cggcagcgca ctcggcgcgt tcctcgctgg cctgttggcc gagatcgagg aggatcgcgc
      541 gacgctgctg cgactgatcg gccgcgttgg ggcccgaccc tcgaaggtga agcaagcgct
      601 cggcgtcgcc gccgagcgcg tcggccggct gaagccgaac gggacgctgg gcggccactc
      661 gccgctgacg ccgttcatcg agttggaggc gctctcactc ggcgtcgagg ggaagcgcct
      721 gctgtgggag gggctcggcg ggctcgccga tccgcgcctg tcggagttcg acttcgtcga
      781 gctcgcggag cgcgcgaccg cgcagcgcgt ggggatcgag cggcaccggc tggcggcggg
      841 gcggaacgcg ttcggctagc ccgcccgacc agcgcttccg cgcccgccag ggtgtcgaca
      901 ccggccctgc gagggagcag tggtccccac cggatccgac gggggacaat caagggccgg
      961 ggggtcggcc ggccccggag cgcgcgcacc gatcggctcc ccgcccgccg atgcgctatg
     1021 ccgacaacga cgacgactcc ctggacaggg gacggacgcc cggccccgag taggatgggg
     1081 cctatcccca tcacctcatg gcgcagtccg tcgttctcta tgggacggag ggactgcagc
     1141 atggacccgc acatctattg caccgagact ctcaacgaac tgcgcgccgc cgacggcgag
     1201 cctgccgcgg acccggacgg cctcctgcgc tggatgcttc tcaccgacct tgcccggcag
     1261 cggctctccg aggacgagtt cgtggccgag ctcatgcggc tgcggctgga ggccacgcgg
     1321 tcacggcggc cggcgctgga ggccgccgcg cgggcggtcc tgtgcgagtg gcgggcgtgg
     1381 gcccagcgtc acgctgtgga ccgggggcga tcggtctctc ctcggcagct acaggatgcc
     1441 ggcacgcgag ccggcctagg tgctctggcc ggaggttagg caccgtctcc tagcggcggg
     1501 taaagcggca cggggtcccg cgcgtccggc ggtttctgaa gtaccccgac acgtccgggg
     1561 cctcggctac gttgaaacag atgaggagtg cggcgacgcg gacagcgacg tgccgttgca
     1621 ccaggaccgg aggtcccctg gaccccgacg ctccctgcgc tggcgccgga tgatgggcgg
     1681 gcacgcatcg tgctatccct ggggccagcg ccgtgggtag gcgacgctgg agcgcaggga
     1741 agtcggcatg ccatgcaggg tgctcgggct cgacgagccg ggggcgaggc gcgtgggtaa
     1801 ggacgcgggg gaaccagcgc cgatcgcgcg ggttcggatc agtggtggcc ggatcacctg
     1861 cgcatcgtgc ggccgcttga gcgtcgaggt ggtgttgctc gatccggccc gaccgctctg
     1921 tagcgcctgc gtgggcgagt cgccctccga ggccggcgcg gcgccggaca ttgccgaatt
     1981 gtgacgccac cgtaacgccc cccgtctccg ccatcgtcta tgctgagcct accttcggta
     2041 cggatggtgt gcgggctatg cacaaccgcg ggcgcgggga tcggtgggtc acgctagtgg
     2101 ggggaagcgg cctcctgggg catcccgtgc atcgggcgcc ggcccttttc ggccgcgccc
     2161 ggcgtttaac cctggtgatg tccccgaaga tgccgcgcgc tgggtcccac acgcggaagc
     2221 gtccgcgccc cacggccggg ggcggtgtgc tcatcgcgga gggtcgcctg gtggacgccg
     2281 tcgcagatgg cacggtgctc cgcggtagca ccgacgagct ggcccggcgg ctcgccgtga
     2341 gtgcccgagc cctctcggcg gccctggagg agctgtccgc tcttcggtgg atcgtcgcgc
     2401 agaccgaggc ggatggccga ctgatggttc gctgggagcg gcgacagtac caggcaccag
     2461 tcttggtgga gcggcgacgg tccgctacct aagcctggca tcccctcgcc ctgcgatcgt
     2521 cgcaattccc acgacgcttc accccctcgc cggggagacc gcccggcgac gtcgccgggc
     2581 aggaagatag cgtccatgcc ccggccggtc ggtcacccgc aacgaggccc gatccagaat
     2641 ttccaggcaa cggcgggcgc cgcgggggct ggcgacggtc ccacgcttcc ggtacactcc
     2701 cgaagctcgg gggtgagcat ggtggtgtct ttggcacggc gggtcggcct gacggtgcta
     2761 ctggcgatcg tgcccctggt cacatcgtgg gccagcgtgg gtgcccagcg ggccggcgac
     2821 ggcggcccga tcgtcgagct ggcgccgcgc gaggccggcc tcaagggaat ggtcgggcac
     2881 tggtggtggt ttgacgccca cctcactcgg tacctcgacg ccttcgccga tctcggggtc
     2941 accaacgtcc ggctcaccac cgactggctc cagatcgagc cggaggaggg gcggcgagac
     3001 ttcgcccgga cggatcggct gttcggcgcg ctcctggccc gtggcatcga gccggtgccg
     3061 gtcttcgcga cgatcccggt ctgggcctca cggaaccccg cggcctgccg tgcccgggac
     3121 atcgattgtg agcccgaccc ggccaagctg gaggccttcg agcggacgat cgccgagctc
     3181 gtcggccgct acccggggat cacgcgctgg gagttctgga acgagccgga gcagtggccc
     3241 ggcctggccg atccgtccgt ctaccagcgc tggtaccgcg ccttctaccg cgccgccaag
     3301 cgcgccaacc cccaggtgcg ggtcgccgta ggcaccatga ccggctgggg cttcctggcg
     3361 cgcaccgatc ccgacctgcc gttcgacgcg gtcacgatgc actcgtacgc cggccacatt
     3421 ggcgacccga tccagacggc ggagttggag cagctccggg ccgggctgct ggcccgcggg
     3481 cgcgacgtgc cgatctggct gaccgagtac ggctgggact cccactg
//
LOCUS       DASUYN010000010         2621 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_3519, whole genome shotgun sequence.
ACCESSION   DASUYN010000010 DASUYN010000000
VERSION     DASUYN010000010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2621)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2621)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2621
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3519"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..323)
                     /locus_tag="VF061_00190"
     CDS             complement(<1..323)
                     /locus_tag="VF061_00190"
                     /inference="COORDINATES: protein motif:HMM:NF016816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M55 family metallopeptidase"
                     /protein_id="HEX6667939.1"
                     /translation="MRVYISVDMEGVAGVVHEDQTDPIEPRHAGEYNRMRRLMTSEAN
                     AAIEGALAAGATRVLVNDSHWLMRNLLAEELHPSAELLSGGPKLRSMVEGIELGFDAA
                     LFVGY"
     gene            380..793
                     /locus_tag="VF061_00195"
     CDS             380..793
                     /locus_tag="VF061_00195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6667940.1"
                     /translation="MHRWTQGIVLAAAALACGPQADTQTSSLLKQGRQYTDWLYGSQY
                     EKLWNRFSPDMRQTFGSVGDLASFAGQAVTRLGREQGQVNERVETASPIRIYSRTAAF
                     DRSRHKMLLEWTMAEDGAVTGLVLRPALDGETAAD"
     gene            complement(790..1119)
                     /locus_tag="VF061_00200"
     CDS             complement(790..1119)
                     /locus_tag="VF061_00200"
                     /inference="COORDINATES: protein motif:HMM:TIGR02222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-binding protein"
                     /protein_id="HEX6667941.1"
                     /translation="MTAVEAFEILDMRVGRILRAEPNERARKPSYKLWIDFGPLGEKT
                     SSAQVRALYRVEDLVGRLVVAAVNLGSRNIAGFASEVLVLGLPSESGEVVLLAVERDV
                     PLGGRVY"
     gene            complement(1116..1502)
                     /locus_tag="VF061_00205"
     CDS             complement(1116..1502)
                     /locus_tag="VF061_00205"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEX6667942.1"
                     /translation="MERQLISSGAPWEPIVGYSRAVRVGNTVHVSGTTATGPDGTLVG
                     VGDAYAQAAQTLRNIEAALRRAGASLEHVVRTRMYVTDIGRWQEFARAHGEVFGSIRP
                     ATSMVEVRRLISPEMLIEIEAEAVIE"
     gene            1650..>2621
                     /locus_tag="VF061_00210"
     CDS             1650..>2621
                     /locus_tag="VF061_00210"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEX6667943.1"
                     /translation="MTASILCIHDDPAVGVILEQVLSGAGHRPILVSSIEEALREASR
                     CPIDLIIADERISGPSAPDRLERDGHPIPVIVLTASGVERAVVSAGFGVVDYLTRPIR
                     PESLEVAARRTLEMARLRRENETFRREIAKIRGRRVLVGESEVFRRTMGAVSALAGFR
                     TTVLLQGESGTGKKLLARAIHDESSRADGPFITVNCAGLPEGLVESALFGHDEGGLAG
                     ATVTAAGAVERAHGGTLLLEEISELRVELQPRVLRLIEEQQFERTRGRDPIRVDVRVL
                     ATTNRHLRTAVDAGRFRSDLYHRLQVLTLQAPTLRERPDDIPRLVEHF"
BASE COUNT          405 a          911 c          907 g          398 t
ORIGIN      
        1 tgatagccga cgaagagcgc ggcgtcgaat cccagctcga tcccttcgac catggagcgc
       61 agtttggggc cgccgctcag gagctccgcc gaggggtgga gctcttcggc cagcaggttg
      121 cgcatcagcc agtggctgtc gttcaccagg actctggtcg ccccggcggc cagcgcgccc
      181 tcgatcgccg cgttggcctc gctggtcatc agccggcgca ttctgttata ctcccccgca
      241 tgtcggggct cgatggggtc ggtctgatcc tcgtggacca cacctgccac cccttccatg
      301 tcgacggaga tgtagacccg catcacctgc tcccgttgag cgtggatccc cggcgcccaa
      361 gccatctcga ggacgaccga tgcacaggtg gacccagggc atcgtcctgg cagcggcggc
      421 actggcgtgc ggcccccagg cggataccca gaccagcagc ctgctgaagc agggccgtca
      481 gtacacggac tggctctacg gcagccagta cgagaagctg tggaaccggt tctcgcccga
      541 catgcggcag acgttcggca gcgtgggcga ccttgcctcc ttcgcggggc aggccgtcac
      601 ccgcctgggc cgcgagcagg ggcaggtgaa cgagcgggtc gagaccgcga gtccgatccg
      661 gatctacagc cgcaccgctg ccttcgaccg gtcgcgtcac aaaatgctgt tggagtggac
      721 catggcggaa gatggcgcgg tcaccggact ggtgctgcga ccggcgctcg acggcgagac
      781 cgccgccgac tagtagactc gacccccgag cggcacgtcc cgctcgacgg cgagcagcac
      841 cacctcgccg gactcgctgg gcagaccgag caccagcacc tccgaggcga agcccgcgat
      901 gttgcggctg cccaggttca ccgccgccac caccagcctg ccgaccagat cctcgacccg
      961 gtagagcgcg cgcacctgcg cgctcgaggt cttctccccc agcgggccga aatcgatcca
     1021 cagcttgtag gagggcttgc gtgcccgctc gttgggctcg gcgcgcagga tccggcccac
     1081 cctcatgtcc aggatctcga aggcctcgac cgcggtcatt cgatgaccgc ctcggcctcg
     1141 atctcgatca gcatctcggg cgagatgagc cgccgcacct cgaccatgct ggtggccggg
     1201 cggatgctgc cgaagacctc gccgtgggcc cgggcgaact cctgccaccg gccgatgtcg
     1261 gtcacgtaca tccgggtacg cacgacgtgc tccagggacg cgccggcacg gcggagcgct
     1321 gcctcgatgt tccgcagcgt ctgggccgcc tgggcgtacg cgtctcccac gcccacgagg
     1381 gtgccgtcgg gccccgtggc ggtcgtgccg gagacgtgga ccgtgttgcc gacccgcacg
     1441 gcgcgcgagt agccgacgat cggctcccag ggtgcgccac tcgagatgag ctgtcgttcc
     1501 atgtgggggc cggaagatag gtcacgggcc gaagccgggg aagtccgcat gcgcgccccc
     1561 gtccggatga cgaagacggg aggaggacag tattatgcgc atgctgccgg ccacgatcct
     1621 tcctgcctgc ctgaaccggt gagcgtgatg tgacggcttc catcctctgc atccatgacg
     1681 accccgcggt cggcgtcatc ctggagcagg tcctcagcgg tgccggtcac cgcccgatcc
     1741 tcgtctcgag tatcgaggag gccctgcgcg aagcgtcccg ctgtcccatc gacctcatca
     1801 tcgccgacga gcggatctcc gggcccagcg ctcctgatcg gctggagcgg gacggccacc
     1861 cgattccggt gatcgtcctg actgcctcgg gcgtggagcg cgccgtcgta tccgccgggt
     1921 tcggcgtcgt cgactatctc acccggccga tccggccgga atcgctggag gtcgcggcgc
     1981 gccggacatt ggagatggcc cggctgaggc gggagaacga gaccttccgc cgcgagatcg
     2041 cgaagatccg cggccggcgg gtgctggtcg gggagagcga agtcttccgg cgcaccatgg
     2101 gcgcggtctc agccctggcc ggcttccgga cgacggtcct cctgcagggg gagtcaggga
     2161 cgggaaagaa gttgctcgcc cgggcgatcc atgacgagag cagccgggcg gacggaccct
     2221 tcatcaccgt caactgtgcc ggcctgccgg aaggtctggt ggagagcgcg ctgttcggcc
     2281 atgacgaagg cgggctcgcc ggcgcgacgg tgaccgcggc cggagccgtg gagcgggcgc
     2341 acgggggcac gctgctcctg gaggagatct cggagttgag ggtcgagctc cagccgaggg
     2401 tgctccggct gatcgaggaa cagcagttcg agcgcacccg cgggcgcgat ccgatccggg
     2461 tggacgtgcg ggtcctcgcc accaccaatc ggcacctcag gaccgcggtg gacgcggggc
     2521 gattccggag cgacctctac caccggctcc aggtcctcac gctccaggcg ccgaccctgc
     2581 gggaacggcc ggatgacatt cctcgcctgg tcgagcactt c
//
LOCUS       DASUYN010000011         5087 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1106312, whole genome shotgun sequence.
ACCESSION   DASUYN010000011 DASUYN010000000
VERSION     DASUYN010000011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5087
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1106312"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1388
                     /locus_tag="VF061_00215"
     CDS             <1..1388
                     /locus_tag="VF061_00215"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HEX6667944.1"
                     /translation="LDAGATGPGVLTFDAVLARGRAARERHPDWRTEALSAAPDDLAT
                     LIYTSGTTGDPKGVMLSHGNIASNVTTCVDLFSFTAEDECLSFLPLSHIFERMFGHYC
                     MFHAGVVITYAESVDTVPANMLEIRPHLMASVPRLYEKIYARVLDSVRTSSPLRKRLF
                     AWGRRVGERWAELTIAGQPVPPVLQLQRAVADRLVFAKLRKRTGGRIRFFISGGAPLS
                     PDIARFFYAAGLPILEGYGLTETSPVMAVNTFQHHRLGSVGPAIPGVEIRIAADGEIV
                     TRGPNVMCGYFNKPEATAEAIDEEGWFHTGDIGTIDADGFLSITDRKKDLIVTAGGKN
                     IAPQPIENLAKSSKFVATAVMIGDRRPFPVMLVVPNESQVKGWAEHKGLPDGDLEQLL
                     ALPEVRQKIEREVRMTLRDLAQFEMPKKLLLLARDFTVEAGELTPTLKVRRRIVEERH
                     RSAIEGLYLDS"
     gene            complement(1416..2003)
                     /locus_tag="VF061_00220"
     CDS             complement(1416..2003)
                     /locus_tag="VF061_00220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6667945.1"
                     /translation="MFIELTDHLRCPADHGESYLVLLPDEMRDRSVRAGRLGCPVCSR
                     TYTLADGVLDLGGGDTVLPLATLLTAEALTALVGLGGPGGYLVLVGRPAAEWRDVAER
                     NRGVGLVAVNPPPEVVDEPGISVLRGTSLPLKSRSMRGVVLGSPFGGDPAWVAEAARV
                     VLPGLRVAGEGPVPDPGLLDLMAAAGGAWVGTPGR"
     gene            complement(2003..3571)
                     /locus_tag="VF061_00225"
     CDS             complement(2003..3571)
                     /locus_tag="VF061_00225"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEX6667946.1"
                     /translation="MNRSIALVSLLAVAPPAAASSQVPLPPLPDSSGWGVHVLAAAHD
                     SSGTLWVGTYGKGIYRLPRGGRAWQAIRSDTIPGALSWDFVHAFGFGPRGQIWYGTVG
                     NGWGLSVDGGRTWKTWTYDQLGPEWQYVAAGGIATRGDTTVVATADGLQITTDDGAHW
                     TAIVDPVGPPAKGPADTALPLLENEYVRRLAVDQRGWIVSTLRGEQRLRHTADGWVAE
                     RVEGSAFPAHASVTVAGRRYRGSPCGLRPAGERGPCLQGRARRGEQPVAPLTLWLERP
                     IGRADNHHIDQTYRYGSTMGGNFQQHQGVEFNNPDGTPVLAAGPGTVVYAGRAEAGAL
                     TVSIRHDTTVTRDGVTYRLYSTYYHNSSLEVEVGDRVRTGQRISRVGNTGRATNDHLH
                     FELAASPTDSLGAIVDSTQRFPPYTTNAELWLRQLPGTGVVAGQVVGSDGRPVAQARI
                     YGLVKPLPGETPFSFAETYGDRGHSHPLYGEHFAVGDVPAGRYVVGTEIAGQRVLREV
                     TVAPGKVSWVVFAP"
     gene            complement(3568..4278)
                     /locus_tag="VF061_00230"
     CDS             complement(3568..4278)
                     /locus_tag="VF061_00230"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX6667947.1"
                     /translation="MKPLEGRLALVTGASRGIGAAIARALAGAGARVARVARHLADSD
                     EGPWLDLPCDLTDAGQVERLAEHLLRSGGVPAVVVNNAGGFLLRPLERTTAAEFEAQL
                     ALNLRGSFLLARAFLPPMRDAGGGAFISIGSVADHTGFPENAAYAASKYGLRGLHETL
                     AAEYRGTGVRLTLVSPGATDTTIWDPFAPERRPGFPPRIAMLRPEDVADAVLFAATRP
                     EHVHVDWIRMQPTGLPSR"
     gene            complement(4275..4928)
                     /gene="folE"
                     /locus_tag="VF061_00235"
     CDS             complement(4275..4928)
                     /gene="folE"
                     /locus_tag="VF061_00235"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: protein motif:HMM:NF006826.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003934 - GTP cyclohydrolase I activity
                     [Evidence IEA];
                     GO_process: GO:0042559 - pteridine-containing compound
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HEX6667948.1"
                     /translation="MSSMKAPKDSVVVRPERTLVTHPEQPQPHLEPFADRVRALLAAL
                     GENPGREGLLKTPERVEKSLRFLTQGYGMTVEEVIGDAVFEETHQSMIMVRDIELYSM
                     CEHHLLPFFGRAHVAYIPDGKILGLSKVARIVDVFARRLQVQERLTDQIADAVMDVLQ
                     PTGVGVVIEAAHFCMMMRGVEKQNSRTVTSALRGIFRDDSKTRVEFLRLAHGGRTQE"
     gene            complement(4906..>5087)
                     /locus_tag="VF061_00240"
     CDS             complement(4906..>5087)
                     /locus_tag="VF061_00240"
                     /inference="COORDINATES: protein motif:HMM:NF013411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase"
                     /protein_id="HEX6667949.1"
                     /translation="HLDHKNLNLDVPWFQSLNPTSENIALVCWRELRSVVPNELSLRV
                     RLWETPRNYVEYEGA"
BASE COUNT          780 a         1794 c         1777 g          736 t
ORIGIN      
        1 cgctggacgc gggggcgacg gggccgggcg tcctcacctt cgacgccgtc ctggcgcgcg
       61 gccgcgccgc ccgggagcgc catcccgact ggcgcaccga ggccctgagc gcggcgccgg
      121 acgacctcgc caccctgatc tacacctccg ggaccaccgg cgatcccaag ggcgtgatgc
      181 tgtcgcacgg gaacatcgcg tccaacgtga cgacctgcgt ggacctcttc agcttcaccg
      241 ccgaagacga atgcctctcc ttcctgccgc tgtcccacat cttcgagcgg atgttcggcc
      301 actactgcat gttccacgcg ggcgtggtga tcacctacgc cgagagcgtg gacacggtgc
      361 cggccaacat gctggagatc cggccccacc tgatggcctc ggtgccgcgg ctctacgaga
      421 agatctacgc ccgggtgctg gacagcgtgc gcacctcctc cccgcttcgg aagcggctgt
      481 tcgcgtgggg gcgccgggtg ggcgagcggt gggccgagct gacgatcgcc ggacagcccg
      541 ttccccccgt cctccagctg cagagggcgg tggcggaccg gttggtgttc gccaagctgc
      601 gcaagcgcac cggtggccgg atccgcttct tcatctccgg cggggcgccc ctctcgcccg
      661 acatcgcccg cttcttctac gccgcggggc ttccgatcct cgaaggctac ggactgaccg
      721 agacctcgcc ggtgatggcg gtgaacacct tccagcacca ccgcctgggc agcgtgggcc
      781 cggccattcc cggcgtggag atccgcatcg ccgccgacgg ggagatcgtg acccgcggtc
      841 ccaacgtgat gtgcggctat ttcaacaagc ccgaggcgac ggcggaggcg atcgacgagg
      901 agggctggtt ccacaccggt gacatcggga cgatcgatgc cgacgggttt ctcagcatca
      961 ccgaccgcaa gaaggatctg atcgtcaccg ccggaggcaa gaacatcgcc cctcagccga
     1021 tcgagaacct ggccaagtcc agcaagttcg tcgcgaccgc ggtgatgatc ggcgaccgcc
     1081 ggcctttccc cgtcatgctg gtggtcccca acgagtccca ggtgaagggc tgggccgagc
     1141 acaagggcct cccggacggg gatctggagc agctgctggc cctgccggag gtgcggcaga
     1201 agatcgagcg tgaggtgcgg atgactctcc gggacctggc gcagttcgag atgccgaaga
     1261 agctgctgct gctggcccgc gacttcacgg tcgaggccgg tgagctcacg ccgacgctga
     1321 aggtgcggcg gcggatcgtc gaggagcgcc accggtcggc gatcgaggga ctctacctcg
     1381 acagctgagg cggaggtcgc cggcgcgggc gccgatcagc ggccgggcgt gcccacccag
     1441 gccccgcccg ccgccgccat gagatcgagc agtcccggat ccggcaccgg cccttccccg
     1501 gccacgcgga gccccggcag cacgacccgc gcggcctccg cgacccaggc tgggtcgccg
     1561 ccgaagggac tccccagtac cacgccgcgc atggacctcg acttgagcgg cagcgacgtg
     1621 cccctcagga cgctgatgcc gggctcgtcc acgacctcgg gcggcggatt gaccgccacc
     1681 agccctaccc cgcgattgcg ctccgccacg tcgcgccact cggccgccgg ccttcccacc
     1741 agcaccagat agccgccggg cccgccgagc cccaccaggg ccgtgagcgc ctcggccgtg
     1801 aggagggtcg ccagcggcag gaccgtgtcg ccgccaccga ggtcgagcac accgtcggcc
     1861 agcgtgtagg tgcggctgca gaccggacag ccgagccgcc ccgcgcgcac cgagcggtcg
     1921 cgcatctcgt cggggaggag cacgaggtag ctctccccat ggtccgccgg gcagcgcagg
     1981 tgatcggtca gctcgatgaa catcaggggg cgaacaccac ccagctgacc ttcccgggcg
     2041 ccacggtcac ctcgcgcagc acccgctgcc ccgcgatctc ggtgcccacg acatagcggc
     2101 cggccggcac gtcgcccacg gcgaagtgct cgccatagag cgggtgcgag tgacctcggt
     2161 cgccgtaggt ctcggcgaac gagaacggcg tttcgccggg gagtggcttc accagcccgt
     2221 agatccgcgc ctgcgcaacg ggacgcccat cggagccgac gacctgcccg gccacgacgc
     2281 ccgtccccgg gagctggcga agccagagct cggcattcgt ggtatacggc gggaagcgct
     2341 gggtcgaatc cacgatcgcg ccgagggaat cggtcggcga ggcggccagc tcgaaatgca
     2401 ggtggtcgtt ggtggcccgg ccggtgttgc cgacccggga gatccgttgc ccggtgcgca
     2461 cccggtcgcc cacctccact tccagcgagc tgttgtggta gtaggtggag tagagccggt
     2521 aggtgacacc gtcgcgggtc acggtggtgt cgtgccggat gctcaccgtg agcgcaccgg
     2581 cctcggcgcg accggcatac accacggttc cgggcccggc ggcgagcacc ggggtgccgt
     2641 ccgggttgtt gaactcgacg ccctggtgct gctggaagtt ccctcccatg gtcgagccgt
     2701 agcgataggt ctggtcgatg tggtgattgt ccgctcgccc gatcggtcgc tcgagccaga
     2761 gggtgagtgg cgcgacgggc tgttccccgc gtcgggcacg cccctgcagg cagggtcccc
     2821 gttcgccggc cggcctcagc ccgcaggggc tgccgcggta ccggcgtccc gcgacggtga
     2881 cggaggcgtg cgccggaaag gcggacccct cgaccctttc ggccacccag ccgtccgccg
     2941 tgtggcgcag gcgctgctcg ccgcgaaggg tggagacgat ccagccccgc tggtcgaccg
     3001 cgaggcgccg cacgtactcg ttctccagca gcggtagcgc ggtgtcggcc ggccctttcg
     3061 ccggcgggcc gaccgggtcc acgatcgcgg tccagtgcgc cccgtcatcg gtcgtgatct
     3121 ggagtccgtc ggccgtcgcc accaccgtcg tgtcgccgcg ggtcgcgatg ccgcccgcgg
     3181 ccacgtattg ccactcggga ccgagctggt cgtaggtcca cgtcttccag gttcgccctc
     3241 cgtccaccga cagaccccag ccgttgccga ccgtgccgta ccagatctgt ccgcggggac
     3301 cgaagccgaa cgcgtgcacg aagtcccagg agagggcgcc cgggatggtg tcgcttcgga
     3361 tcgcctgcca ggcgcggccg cccctgggca ggcggtagat acccttgccg taggtgccga
     3421 cccagagcgt gcccgacgaa tcgtgcgccg ccgcgagaac gtgcacgccc cagcccgagc
     3481 tgtcgggcag cggagggagc gggacctggc ttgacgcggc ggcgggcgga gcaacggcga
     3541 ggagcgagac gagcgcgatg gagcgattca tcgagacggg agaccggtgg gttgcatccg
     3601 gatccagtcc acgtgcacgt gctccggacg ggtggcggcg aagagcaccg cgtcggccac
     3661 gtcctcgggc cgaagcatcg cgatgcgggg gggaaaaccg ggccgacgct cgggggcgaa
     3721 cgggtcccat atggtcgtgt cggtcgcacc cggcgagacc agggtcagcc gcacaccggt
     3781 gccgcggtat tccgccgcca gcgtctcgtg cagcccgcgc agcccgtact tgctggcggc
     3841 ataggcggcg ttctccggaa agccggtgtg gtccgccaca ctgccgatgc tgatgaaggc
     3901 gccgccgccg gcgtcgcgca tcggggggag aaaggcgcgg gcgagaagga aggaaccccg
     3961 gagattgagc gcgagctggg cctcgaactc ggccgcggtg gtccgctcca gcggccggag
     4021 aaggaagccg ccggcgttgt tcaccacgac cgcgggcacg cctccggatc gaagtagatg
     4081 ctcggcgagg cgctccacct gcccggcgtc cgtcagatca caggggagat ccagccaggg
     4141 cccctcgtcg ctgtcggcca ggtgccgcgc gacccgggcc acccgggccc ccgctcccgc
     4201 cagcgcccgg gcaatggcgg cgccgatgcc tcgcgaggcc ccggtgacca gggccagccg
     4261 tccctcgagc ggcttcactc ctgggtgcgg ccgccgtggg cgaggcggag gaactcgacc
     4321 cgggtcttgg agtcgtcccg gaagattccg cggagcgcgc tggtgaccgt ccgtgagttc
     4381 tgcttttcga ccccccgcat catcatgcag aagtgtgccg cctcaatcac gacacccacg
     4441 ccggtcggct ggagcacgtc catgaccgca tcggcgatct ggtcggtcag ccgctcctgc
     4501 acctggagcc gtcgcgcgaa gacatccacg atccgggcca ccttggagag gccgaggatc
     4561 ttgccgtcgg ggatgtaggc gacgtgggcc cggccgaaga aggggaggag gtggtgctcg
     4621 cacatcgagt acagctcgat gtcgcgcacc atgatcatgc tctggtgggt ctcctcgaag
     4681 acggcgtcgc cgatcacttc ctccaccgtc atcccatagc cctgggtgag gaagcgcaac
     4741 gatttctcca cccgctcagg cgtcttcaac aggccctcac gtccgggatt ctcgcccaag
     4801 gcggccagaa gcgcgcgaac tctgtcggcg aaaggctcca gatgaggctg gggctgttcc
     4861 ggatgtgtaa ccagggtccg ttccggccgg actaccaccg aatccttagg cgccttcata
     4921 ctcgacatag ttcctcgggg tctcccacag gcgtacacgc aacgacagct cgttcgggac
     4981 cactgaccgc agctcccgcc agcagaccag cgcgatattc tcggaggtcg gattcagcga
     5041 ctgaaaccag ggtacgtcga ggttcagatt cttgtggtcg aggtgac
//
LOCUS       DASUYN010000012         3649 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_886342, whole genome shotgun sequence.
ACCESSION   DASUYN010000012 DASUYN010000000
VERSION     DASUYN010000012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3649
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_886342"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..543)
                     /locus_tag="VF061_00245"
     CDS             complement(<1..543)
                     /locus_tag="VF061_00245"
                     /inference="COORDINATES: protein motif:HMM:NF014640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HEX6667950.1"
                     /translation="MAPWRGWRALTLVNRIPDIDLCILGRGGGGREDLAAFNSEPVCR
                     ALAAVRVPTISAVGHETDISLTDLVADLRAPTPSAAAEMAVADRREVLRQLDDIAARL
                     AGALSGRTRVAAERLARTGDRLQGAMEAVLRRERHRADRLAAQLDALSPLRILDRGYA
                     VPVDPDGRVLKRRADFRPGAS"
     gene            849..1088
                     /locus_tag="VF061_00250"
     CDS             849..1088
                     /locus_tag="VF061_00250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6667951.1"
                     /translation="MPSLGGSPIPWLYRLHMQQRTWVCRSRSPKYQCPLDQALHPTTS
                     PRIQSGMNPPSTRRLVAETSWVTDHTSSVGAIMLN"
     gene            complement(1124..2014)
                     /gene="folD"
                     /locus_tag="VF061_00255"
     CDS             complement(1124..2014)
                     /gene="folD"
                     /locus_tag="VF061_00255"
                     /EC_number="1.5.1.5"
                     /EC_number="3.5.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004488 - methylenetetrahydrofolate
                     dehydrogenase (NADP+) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HEX6667952.1"
                     /translation="MSAKVLDGVALAKTIRAEVAAEVARLAGDGRKPGLAAVLVGEDP
                     ASAVYVRSKGRATEEAGMYSETIRHPATISEADLLAIVDRLNADPKIHGILVQLPLPK
                     HIDSEKVLFRIDPAKDVDGFHPVNVGRLVTGDRKAFRPATPYGVQQMLIRNGIETKGA
                     HAVIVGRSNIVGKPMANLLIQQGPGGDATVTVCHSRTRDLPAVTRTADILIAAIGKAE
                     FVTADMVREGAVVVDVGINRVDDAAQPRGYRLVGDVAYGPVAEKASWITPVPGGVGPM
                     TIAMLLQNTLQAWTQIEARR"
     gene            complement(2011..>3649)
                     /gene="rny"
                     /locus_tag="VF061_00260"
     CDS             complement(2011..>3649)
                     /gene="rny"
                     /locus_tag="VF061_00260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004521 - RNA endonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ribonuclease Y"
                     /protein_id="HEX6667953.1"
                     /translation="GRIVGLTPMSASLLLPTLAGVAAGLAVGLLFLFVYRRTQRRAAD
                     GVLATAQRVAEGLRAEARREAERLRADAARESEAAKAEIVLAAKMETLKLREDLDREI
                     SRRREEFERLERRAEERARGQDRKIEEMNTRERTLDKREEGLGQKELALHTRDLETEK
                     LAQEQQARLERIAGLTSEEARREILQRVEDEARGQAAALVRDIKEQARKTADRDARKI
                     IALATQRLASEYTAESTVAAVPLPSDEMKGRIIGREGRNIRAFETATGVDVIIDDTPD
                     TVIVSCFDPIRREVARRALEALIQDGRIHPGRIEEIVAKVQKELETQLVELGEQAAYD
                     TGIHGLHPELIKLIGRMRYRTSYGQNIYEHSKEVAWLAGMMAAELHLDPQLAKRGGLL
                     HDIGKVLTHDSEGTHVELGVEVARRYGESAAVINCIQAHHDDVPHETAESVLVQAADA
                     ISGSRPGARREAFETYVKRLTRLEEIANGFPGVEKCNVIQAGREVRVVVTPDRIDDGA
                     ATQLSETIARKIENELQYPGQIKVVVIRETRAVDYAR"
BASE COUNT          463 a         1381 c         1230 g          575 t
ORIGIN      
        1 ggacgcgccg gggcggaagt ccgcccggcg cttgaggacc cggccgtccg ggtccaccgg
       61 cacggcgtag ccgcggtcga ggatgcggag cggactcagc gcgtcgagct gcgcggccag
      121 ccggtcggcg cggtggcgtt cccgccggag caccgcttcc atggcgccct ggagccggtc
      181 cccggtgcgc gccagccgct cggccgccac gcgggtgcgc ccgctcagcg caccggcgag
      241 ccgcgcggcg atgtcgtcga gctggcgcag gacctcgcgc cgatcggcga ccgccatctc
      301 ggcggcggcg gagggcgtgg gggcccggag gtcggccacg agatcggtga gcgagatgtc
      361 ggtctcgtgt cccacggccg agatcgtggg cacccgcacg gcggcgaggg cgcggcagac
      421 cggctcgctg ttgaacgccg ccaggtcctc ccgtccgcct ccgccgcggc ccaggatgca
      481 gaggtcgatg tcggggatcc ggttcaccag cgtgagcgcg cgccagcccc gccacggcgc
      541 catcgccctg caccctggcg ttcacgacca gcagccgaca gcagggccac cgcttgccga
      601 cgacggtgat gatgtcgcgg agcgcggccc cgtcggtgct ggtgaccacc acgacgctgg
      661 aggcgagctc ggggatcgga cgcttgcgcg cctgatcgaa gagtccgtcc cgctggagtg
      721 cctccttcac ccgctccagc tcgcgctggg ccgcgccgac ggcggacgtc gggatcatcc
      781 gggtgacgct gagctgaaac tcgcccttgg actcgtagat cccgggccgc gcgaggacga
      841 agacctcggt gccgtccctg ggcggctcgc ccatcccctg gttgtaccga ctccacatgc
      901 agcagcgcac ctgggtctgc cggtcgcgca gcccgaaata ccagtgcccg ctcgaccagg
      961 ccttgcaccc caccacctcg ccccggatcc agagcggcat gaacccgccc tccaccaggc
     1021 gcttggtggc ggagacgagc tgggtgacgg accacacgtc gtccgtgggg gcgatcatgc
     1081 tcaactgaaa ggagagggcc atcgggcgtc cggcgggctc gggctaacga cgagcctcga
     1141 tctgggtcca cgcctgcagg gtattctgca gcaacatcgc gatcgtcatc ggacccacgc
     1201 cgcccggcac cggagtgatc cagctcgcct tctccgccac cggcccgtag gcgacgtcgc
     1261 cgacgagacg gtagccccgg ggctgcgcgg catcgtccac ccggttgatg ccgacgtcga
     1321 ccacgacggc gccctcgcgc accatgtcgg cggtcacgaa ctcggccttg ccgatggccg
     1381 cgatcaggat gtcggccgtg cgggtgacgg ccggaaggtc gcgggtacgc gagtggcaga
     1441 ctgtcaccgt cgcgtcgccg ccggggccct gctgaatcag caggttcgcc atcggcttgc
     1501 cgacgatgtt cgaccggccc acgatcaccg cgtgcgcccc cttggtctcg atcccgttgc
     1561 ggatgagcat ctgctgcacg ccgtacgggg tcgccgggcg gaacgccttc cggtcacccg
     1621 tcaccagccg gccgacgttc accggatgga agccgtccac gtccttcgcc ggatcgatcc
     1681 ggaagaggac cttctcgctg tcgatgtgct tcggcagcgg gagctggacc aggatcccgt
     1741 ggatcttcgg atcggcgttg agccggtcca cgatcgccag caggtcggcc tcggagatcg
     1801 tcgccgggtg gcggatcgtc tccgagtaca tcccggcttc ctcggtggcc ctgcccttgg
     1861 agcgcacgta cacggcgctc gccggatcct cgcccaccag gaccgccgcg agacccggtt
     1921 tccgcccgtc gcccgcgagt cgcgccacct ccgccgccac ctcggcgcgg atcgtcttcg
     1981 ccagcgccac gccatccaga accttcgcgc tcatcgagcg tagtccacgg ctctcgtctc
     2041 cctgatcacg accaccttga tctgtcccgg atactgcagc tcgttctcga tcttcctggc
     2101 gatcgtctcc gagagctgcg tcgccgcccc gtcgtcgatc cggtccggcg tcaccaccac
     2161 ccggacctcg cgccccgcct ggatcacgtt gcacttctcc acgccgggga agccgttggc
     2221 gatctcctcc agccgggtga gccgcttcac gtaggtctcg aacgcctcgc gccgcgcccc
     2281 cgggcgcgag ccgctgatcg cgtcggccgc ctgcaccagc accgactccg cggtctcgtg
     2341 gggcacgtcg tcgtggtgcg cctggatgca gttgatcacc gccgcgctct ccccgtagcg
     2401 ccgcgcgacc tcaacgccca gctccacgtg ggtgccctcg ctgtcgtggg tcagcacctt
     2461 cccgatgtcg tgcagcaggc cgccccgctt ggcgagctgc gggtcgaggt ggagctccgc
     2521 cgccatcatg ccggcgagcc aggccacctc cttggagtgc tcgtagatgt tctgcccgta
     2581 ggacgtgcgg tagcgcatcc ggccgatcag cttgatcagc tcggggtgca ggccgtggat
     2641 gccggtgtcg tacgccgcct gctcgcccag ctcgaccagc tgggtctcca gctccttctg
     2701 caccttggcc acgatctcct cgatccggcc cggatggatg cgcccgtcct ggatcagcgc
     2761 ctcgagcgcg cggcgcgcca cctcgcgccg gatcgggtcg aagcaggaga cgatgaccgt
     2821 gtccggggtg tcgtcgatga tgacgtccac cccggtggcg gtctcgaagg cgcggatgtt
     2881 ccgcccctcg cgcccgatga tccggccctt catctcgtcg ctggggagcg ggaccgcggc
     2941 cacggtgctc tccgcggtgt actccgaggc cagccgctgg gtcgcgagcg cgatgatctt
     3001 ccgggcatcc cggtcggcgg tcttccgggc ctgctccttg atgtcgcgca ccagcgcggc
     3061 cgcctgcccg cgggcctcgt cctccacccg ctgaaggatc tcccgccggg cttcctccga
     3121 ggtgagcccg gcgatccgct ccagccgtgc ctgctgctcc tgcgccagct tctccgtctc
     3181 caggtcccgg gtgtgcagcg ccagctcctt ctgtcccaac ccctcctccc gcttgtcgag
     3241 cgtgcgctcg cgggtgttca tctcctcgat cttgcggtcc tggccacggg cgcgctcctc
     3301 ggcgcggcgc tccagccgct cgaactcttc ccgccgccgg gagatctccc ggtcgaggtc
     3361 ctcccgcagc ttgagcgtct ccatcttcgc ggcgagcacg atctcggcct tggcggcctc
     3421 cgattcccgc gcggcgtccg cccggagccg ctccgcctcc cgcctcgcct cggcgcgcag
     3481 cccttcggcc acgcgctgcg cggtggcgag cacgccgtcg gcggcgcggc gctgagtccg
     3541 gcggtagacg aagaggaaga ggaggccgac ggccagaccg gccgccaccc ccgcaagggt
     3601 ggggaggagc agcgacgcgg acataggagt aaggcctacg atgcggccg
//
LOCUS       DASUYN010000013         2334 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_225396, whole genome shotgun sequence.
ACCESSION   DASUYN010000013 DASUYN010000000
VERSION     DASUYN010000013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2334
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_225396"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..243
                     /locus_tag="VF061_00265"
     CDS             <1..243
                     /locus_tag="VF061_00265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6667954.1"
                     /translation="RFQEASVDVLGLDAEWSPSDRLRLALGGARYWESRERPDAAAFD
                     WNQTRLQARVTVLLRSETDAMPLPPARRSRPRATSP"
     gene            240..1676
                     /locus_tag="VF061_00270"
     CDS             240..1676
                     /locus_tag="VF061_00270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6667955.1"
                     /translation="MSIRRRRLLLGLGLAVLGGASGVAAVALQDRFDHWEHAALFPTC
                     LGCHAGVADTGVSLWPQTADCSACHDGTVEETVNWRPPAATPATNLRFTHPAHAKAVT
                     GAHPDSTVQCRDCHAERGAERMRVQLAVVSNCLDCHGITVAHLDAPDTACATCHLPLV
                     RAVRLTREDVGDFPVPESHSQPGFAAAQHGKLARAAAPIAASCATCHARDFCAECHVN
                     APEVPAIQALAPDPRSLAHPAELEAPTSHQDPAFLRRHGAQARKSAATCATCHTQESC
                     LACHAASPSSVQAIPAAAPGRGRGAQIERERPVSHGPDFSETHAEAAAARQQSCTTCH
                     VRTECLSCHRPDPGAAAPGYHPAGFLSTHPASAYSRASSCTDCHNQAQFCADCHVRAG
                     LTAPGQLRGAGYHDAKGAFLLNHGQAARQSLESCVSCHSERDCLPCHSARGGRRFNPH
                     GPGFDAATLRRKNPSMCSVCHGASIPGG"
     gene            1770..2228
                     /locus_tag="VF061_00275"
     CDS             1770..2228
                     /locus_tag="VF061_00275"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HEX6667956.1"
                     /translation="MRVALRTPIAGKLGEEFDRIVDRLLVPRFYNEPLLPPFPFETAG
                     AEWTPFMDVIETAEEYIVRLEAPGIHKENLDINLLGEILTITGKREMAPEIEGEGYLV
                     RERAYGKFVRTIRLPVPVAEKKVVAEYQDGVLMVHVPKAAPAPATKVLIK"
BASE COUNT          364 a          820 c          786 g          364 t
ORIGIN      
        1 cggttccagg aagcgtcggt tgacgtgctc ggcctcgatg cggagtggag cccgtcggac
       61 cggctcaggc tcgcgcttgg gggggcccgc tactgggagt cccgtgagcg tccggacgcc
      121 gccgcgttcg actggaacca gacccggctc caagccaggg tcaccgtgct cctccgcagc
      181 gagaccgacg ccatgccgct gcccccggcg cgtcgtagcc gtccccgggc gacttcccca
      241 tgagcattcg tcgacggcgg ctccttctcg gactcggcct tgcggtgctc ggcggagcca
      301 gcggcgtcgc cgcggtcgcc cttcaagatc gcttcgatca ctgggagcac gccgcgctct
      361 ttcccacctg cctcggatgt cacgcggggg tagcggatac cggggtgtcg ctctggcccc
      421 agaccgccga ctgctcggcc tgccacgatg gaacggtcga ggaaaccgtg aactggagac
      481 cgcctgccgc cacgccggcg accaatctcc ggtttaccca tccggcacac gccaaggcgg
      541 tcaccggagc gcaccccgac tcgaccgttc aatgccgcga ctgccatgcg gagcggggcg
      601 ccgagcggat gcgggttcag ctcgcggtcg tgagtaactg cctggattgc cacggcatca
      661 cggtcgcgca cctcgatgct cccgataccg cgtgcgcgac ctgtcacttg ccgctggtgc
      721 gggcggtgcg gttgacccgg gaggatgtgg gcgatttccc ggtgcccgag tcgcatagtc
      781 agcccggttt cgccgccgcc cagcatggaa agctcgcccg cgccgctgcc ccgattgcgg
      841 catcatgcgc cacctgccac gctcgcgact tctgcgccga gtgtcacgtg aacgcgcccg
      901 aggtcccggc aattcaggcc ctcgcgccgg accctcggtc actggcgcac ccggccgagc
      961 tggaagcgcc gaccagccat caggaccccg cattccttcg ccgccacggc gcccaggcca
     1021 ggaagagcgc cgcgacctgt gccacctgtc atacccagga gagctgcctg gcgtgccacg
     1081 cagcttcgcc ttcgagcgtg caggctatcc cggctgccgc cccgggccgg ggccgcggcg
     1141 cgcagatcga gcgggaacga ccggtctctc acgggcccga tttctccgag acgcatgccg
     1201 aggcggccgc cgcccggcaa cagagctgca ccacctgcca cgtccggacc gagtgcctga
     1261 gctgtcaccg accggatccg ggtgccgcgg cgccgggcta tcaccctgcg gggtttctga
     1321 gcacccaccc ggcatccgcc tacagtcggg cgagctcctg caccgactgc cacaaccagg
     1381 cacagttctg tgccgactgc cacgtgcgcg ccggcctcac cgcgccgggg caactccgcg
     1441 gcgcgggcta tcacgacgcc aagggcgcgt tcctgctgaa ccacggccaa gccgcgcgtc
     1501 agagcctgga gagctgtgtc tcgtgccact cggagcgcga ctgcctgccc tgccactcgg
     1561 cgcgcggcgg gcgacgcttc aacccccacg gcccgggatt cgacgccgcg acgctgcggc
     1621 ggaagaaccc ttcgatgtgt tcggtctgcc acggagcgag catacccggc gggtgagcgc
     1681 acgccgcggg tttcacggca aattcatgct cgcatcatgg catgaatgtt acttttgtgc
     1741 cgcagcttgg accctgacac ggaggtgtta tgagagtcgc gctgcggacc cccatcgcgg
     1801 ggaagctggg tgaggagttc gatcggatcg tcgatcggct gctcgtccca cggttctaca
     1861 atgagccgct cctgccgccg ttcccgttcg agaccgcggg cgcggagtgg actcccttca
     1921 tggatgtcat cgagaccgcc gaggagtaca tcgtccgtct cgaggcgccg ggaatccaca
     1981 aggagaatct ggacatcaac ctcctcggtg agatcctgac gattaccggg aagagggaga
     2041 tggcgccgga gatcgagggc gagggctatc tggtgaggga gcgggcgtac gggaagttcg
     2101 tccggacgat ccggctgccg gtgcctgtcg ccgagaagaa ggtcgtcgcc gagtatcagg
     2161 atggcgtgct gatggtgcac gtgccgaagg ccgctccggc cccggccacg aaggtcctga
     2221 tcaagtaagg cgaaggcagg atgaacgacg aggcgatcac cgggggggtg accgcctcgt
     2281 ggtgtttcta tccccgacct gtcaccccga gcgagcggga gatgacagcg acgc
//
LOCUS       DASUYN010000014         7231 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_4812, whole genome shotgun sequence.
ACCESSION   DASUYN010000014 DASUYN010000000
VERSION     DASUYN010000014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7231)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7231)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7231
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4812"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..579)
                     /locus_tag="VF061_00280"
     CDS             complement(<1..579)
                     /locus_tag="VF061_00280"
                     /inference="COORDINATES: protein motif:HMM:NF012695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HEX6667957.1"
                     /translation="MLDTAVIPCGGLGTRLHPITRWLPKEMLPVALRPVLHWTLDEAA
                     DAGLLRAVVITNPHKPVLEAVARSYPGPLDLEFVPQDHPHGLGDAFLRARDQLGSAPF
                     VVLLPDNLFQGPNPTAAVLQTHRRTGLATVLLAEISPVDAPTKGATGRARIEPAGDGT
                     LRVTDVADKGTGRFDAGAGAAVTPIGRMVFPGD"
     gene            724..1218
                     /locus_tag="VF061_00285"
     CDS             724..1218
                     /locus_tag="VF061_00285"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HEX6667958.1"
                     /translation="MSAARIPLAVAFPLVSNGWRMAILAVAAATDLLDGPLARRFGSS
                     ALGSLIDPVADKLFMAAAFGVVAVSGRLAPYEIVGVLLRDIVATVAFVATIYSNRPRA
                     IPARAGGKAVTVAQVLTLVAFLTGSALLQPMAWATTAIAIYAIWDYYRVAPTAERPVG
                     GAER"
     gene            1215..1625
                     /locus_tag="VF061_00290"
     CDS             1215..1625
                     /locus_tag="VF061_00290"
                     /inference="COORDINATES: protein motif:HMM:NF014608.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEX6667959.1"
                     /translation="MTAEVKHIALEWQQGMIFRGGAPDGPQVVIDGDNAQAPGPMLTL
                     LLVAASCTGCDVVLILEKMRVGLRQLRIEVHGTRREDPPRRYTAIRIEFHLAGDDLDE
                     SKARRAIDLSLEKYCSVVASLAPDIALSYGLTLA"
     gene            1606..2073
                     /locus_tag="VF061_00295"
     CDS             1606..2073
                     /locus_tag="VF061_00295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6667960.1"
                     /translation="MGLRWLSAAAVVAAAAPPAGAQQVRELGFQAVGTLSDPALAVGG
                     LYAGWRPTRRARLTAMAGLGGSGDETAWRAELLGHFLLAPSRREGPGVYLAGGVAAVG
                     GASDRGYVVIAMGIEDRPGAARGWFAVAGGGGGPRLSAGYRWRWFPRWWSLAQ"
     gene            complement(2136..2399)
                     /locus_tag="VF061_00300"
     CDS             complement(2136..2399)
                     /locus_tag="VF061_00300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6667961.1"
                     /translation="MKTKNLRREPEAVSFSQARDEMFSHILRCGVIDALPEHQKDWFD
                     DTMLYLADRYEDLTKEELDQLRVLGERFSQPVQRKTELATGAA"
     gene            2604..2906
                     /locus_tag="VF061_00305"
     CDS             2604..2906
                     /locus_tag="VF061_00305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6667962.1"
                     /translation="MAEHDEVYDDARADRLADLLRGLARRIQDLDQAGQLLRGAPELL
                     RLMGDARSELFHYEVRSTYDTPEVADSRRIVEDAQRQDPLANDDSEDDEPWRRRPE"
     gene            2885..3562
                     /locus_tag="VF061_00310"
     CDS             2885..3562
                     /locus_tag="VF061_00310"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HEX6667963.1"
                     /translation="MAATPGMKRFYAILAGVALLGLGALGFLLSRPKVSSIPANVTVQ
                     PADTAGFRGYIKGSQSAPIEITEYADYQCPFCQTFATLQMPTIEERLIKTGRLRWRYR
                     DFPLQQHPFARLAAHSAACAEEQGKYWEQHDRIYEGQAEWSAARDAGDHFREYAKGLS
                     LDLDRYDECMESGRYAGRIQASYEEGARAGVASTPTLLVGNRLYQGRIDSDAIRRLVD
                     SLSPPTP"
     gene            3604..5538
                     /locus_tag="VF061_00315"
     CDS             3604..5538
                     /locus_tag="VF061_00315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter Kup"
                     /protein_id="HEX6667964.1"
                     /translation="MALDPKAPPRGKALAALAFTALGVVYGDIGTSPLYAIKECFSGL
                     HSIEPTRENVIGVLSLIFWSLNFIVSFKYITFVLRADNRGEGGTFALLAQVRPLSRAV
                     GGRRVLVALGLFGASLLFGEGVITPAISVLGAIEGVTLAAPGVGPLIWPIAALVLTAL
                     FAVQKRGTEQIGRMFGPVMAVWFTSIAVLGVRGILMAPEVLRALSPWYAVDFFIRDGL
                     AGFLILGSVVLVVTGSEALYADMGHFGRRPIRLTWFAVVLPCLVINYFGQAALLLTDP
                     RARANPFFSLAPEWALYPMIGIATAAAIVASQALISGAFSLTRQAVQLGYIPRVTIVH
                     TSSTQIGQIYIPEVNWALWIGCIALVVGFRSVTNLAGAYGVAVTGTMIVTTLLLHTVA
                     CDRWHWPRWRARALTGTLLVVDVAFFSANVIKVEQGGWFPIVVGIGMYLLMTTWNRGR
                     ARLQAIVRENTLGMDLFLADVARRQPPRVPGTAVFLTSDIGGAPPVLLHHLKHNKVLH
                     EKVMLMSVVTEEIPTVDEDDRVECEELGEGFYKVIAHYGFMESPDIPAALGQLGRAGA
                     DGRPLAIKAMETSFFLGRETLIATRNPPTTTPVPDAIGRMAMWRKRLFILMTRNARSA
                     TAFFGLPPNRVVELGAQIQF"
     regulatory      5758..5841
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01051"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cyclic di-GMP riboswitch class I; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="cyclic di-GMP"
                     /db_xref="RFAM:RF01051"
     gene            5851..6165
                     /locus_tag="VF061_00320"
     CDS             5851..6165
                     /locus_tag="VF061_00320"
                     /inference="COORDINATES: protein motif:HMM:NF024857.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HEX6667965.1"
                     /translation="MRSPQEVERGLSAPDTLGLESRVEIRKAAFQLLEAMPEGTGRLV
                     IDLGHTRHIDSAGLGALMLIQRLAAERRQTVVLRNPSEEIRFLLVLTKLDDLFLVEAD
                     DD"
     gene            6292..6660
                     /locus_tag="VF061_00325"
     CDS             6292..6660
                     /locus_tag="VF061_00325"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX6667966.1"
                     /translation="MTQATRRRRVLIVEDEPALRLSYDRAFRPRYDLAFASNGAEAME
                     KLEQHQPEVAVLDMRLPDTDGIELLRRIRVSHPHLPVIITTAYLSIEPQLKVLDLPHS
                     GYIVKPFRLDELGARIDAVL"
     gene            6647..>7231
                     /gene="ccmA"
                     /locus_tag="VF061_00330"
     CDS             6647..>7231
                     /gene="ccmA"
                     /locus_tag="VF061_00330"
                     /EC_number="7.6.2.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR01189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015439 - ABC-type heme transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC exporter ATP-binding protein CcmA"
                     /protein_id="HEX6667967.1"
                     /translation="MPSSDGAAGHPLLEARGLKRSFGGLRVLRGLDLVLRAGEAVVVA
                     GPNGAGKTTLLRVLAGLMRPEAGEVRVLGHPVRGADALGRRALGFVSHQSLLYDDLSL
                     AQNLAFAARLYRLPRPGEVARRALETAGLAGRADESPRRLSRGMAQRAAIARALLHGP
                     RVLLLDEPFTALDAASADRLRAELAARLAEGLGMV"
BASE COUNT         1017 a         2474 c         2559 g         1181 t
ORIGIN      
        1 gtcgcccgga aacaccatcc gcccgatcgg ggtgaccgcc gctcccgcgc ccgcatcgaa
       61 ccgtcccgtt cccttgtccg ccacgtcggt cacccgcagc gttccgtcgc cggccggctc
      121 gatccgcgcc cggccggtgg cgcccttggt cggcgcgtcc acaggggaaa tctccgccag
      181 gagcacggtc gcgagtccgg tgcggcggtg cgtctgcaag accgcggcgg tcgggttggg
      241 gccctggaag agattgtcgg ggagaaggac cacgaacggc gcggaaccga gctggtccct
      301 ggcgcggagg aaggcatcgc ccagaccgtg gggatggtcc tggggcacga actccaggtc
      361 cagcgggccc gggtagctgc gggcgaccgc ctcgagcacc ggcttgtggg gattggtgat
      421 gacgacggct cgcaggagac cggcatcggc ggcctcgtcc agcgtccaat gcagcaccgg
      481 ccgcagggcc accgggagca tctctttcgg cagccagcgg gtgatcggat ggaggcgggt
      541 gccgaggcct ccgcagggaa tgaccgcggt atccagcatc agcgggtgtc cgtggcgacg
      601 agtatcttgt acgccaggcg ccgcgggtcc cggcctcctg ccattgaaag gagcaaggtg
      661 tccgaaacta gtcctcgcca gaaaggggat caaggccgac tccggtggac gccggcggac
      721 ctgttgagcg ccgcacggat cccgctggcc gtggcctttc cgctggtgtc gaacggctgg
      781 cgaatggcga tcctcgccgt cgccgcggcg accgacctcc tggatggtcc cctggcgcgc
      841 cggttcggct cctccgcgct cggcagcctg atcgatccgg tagcggacaa gctcttcatg
      901 gccgcggcct tcggcgtcgt ggccgtctcg ggccgcctcg ccccctacga gatcgtgggg
      961 gtcctgctgc gcgatatcgt cgccaccgtg gcgttcgtgg ccacgatcta ctccaaccgc
     1021 ccccgtgcca tcccggcccg cgccgggggc aaggcggtga ccgtggccca ggtgctcacg
     1081 ctggtcgcgt tcctcaccgg ctcggcgctg cttcagccca tggcgtgggc cacgacggcg
     1141 atcgcgatct atgcgatctg ggactattat cgggtcgcgc ccacggcgga gcggccggtg
     1201 ggaggggcgg agcgttgacg gccgaggtca agcacatcgc gctcgagtgg cagcagggca
     1261 tgatcttccg gggcggtgct ccggacggac cgcaggtcgt gatcgacggc gacaatgccc
     1321 aggcgccggg gccgatgctc accctcctcc tcgtggccgc gtcctgcacc ggctgcgatg
     1381 tggtgctgat cctggaaaag atgcgtgtag ggctgcggca gctccggatc gaagtgcacg
     1441 gcacccgtcg ggaagaccct ccccggcgct ataccgccat ccgaatcgag ttccacctcg
     1501 ccggcgacga tctggacgag agcaaggccc gccgggcgat cgatctctca ctggagaagt
     1561 actgctcggt ggtggcctcc ctcgcgccgg atatcgcgct cagctatggg cttacgctgg
     1621 cttagcgcgg cggcggtggt cgccgccgcg gctccgccgg ccggcgctca gcaggtcagg
     1681 gaactcggct tccaggcggt cggcacgctg tcggatcccg ccctggcggt gggcgggctg
     1741 tacgccggct ggcggccgac gcgccgggct cgactgacgg cgatggcggg attgggtgga
     1801 tcgggcgacg agacggcctg gcgggccgag ctgctgggtc atttcctcct ggcaccgagc
     1861 cggcgcgaag gcccgggggt gtatctggcg ggcggggtgg cggcggtcgg cggggcatcg
     1921 gaccgcggct atgtcgtgat cgcgatgggg atcgaggatc ggccgggggc ggcgcgtggc
     1981 tggttcgccg tggcgggggg cgggggcggc ccccgcctgt ccgccggcta ccggtggcgc
     2041 tggtttcccc ggtggtggtc cctggcgcaa tgagtgggta ataatgaaaa gcgccccggg
     2101 gaaactcccc ggggcgctgc gtcttgcggc agggctcagg cggcgcccgt ggctagctcg
     2161 gtcttgcgct ggaccggctg gctgaaccgc tccccgagca cgcggagctg gtcgagctct
     2221 tccttggtca ggtcctcgta ccgatcggcc aggtacagca tcgtgtcgtc gaaccagtcc
     2281 ttctgatgct ccggaagggc gtcgatgacg ccgcagcgga ggatgtgact gaacatctcg
     2341 tcacgggcct gcgagaacga caccgcttcg ggttcgcgcc ggagattctt cgtcttcatc
     2401 taccttcctt ctcacggcgg gctgccgtgg ggtcgagggt ggaattcggc ctcaatataa
     2461 ccagtttgca ccttttggtg caaaggcccg gtacatcccc gatccggggt ccggggcggg
     2521 ttcagacgcc aaaatcggac cacggcggcc cggcttcggt gatgcgaccc acataccggc
     2581 ctcctattat cattagcccc agcatggccg aacacgacga agtgtacgac gacgcccggg
     2641 cggaccgcct ggcggacctc ctcagagggc tggcccggcg gatccaggac ctggatcagg
     2701 ccggacaact gttgcgcggg gctccggagc tgctccggct gatgggcgac gccagaagcg
     2761 agctgttcca ctacgaggtc cggagcacct atgacactcc cgaggtggcg gacagccgcc
     2821 gcatcgtgga ggacgcccag cgccaggatc ccctcgccaa cgacgattcg gaggacgacg
     2881 agccatggcg gcgacgcccg gaatgaagcg cttctacgcc atcctcgcgg gagtcgccct
     2941 gctggggctt ggcgccctgg gctttcttct ctcccgcccg aaggtctcca gcatcccggc
     3001 caacgtcacc gtccagccgg ccgacaccgc cgggttccgg ggatacatca agggctcgca
     3061 gagcgcgccg atcgagatca ccgagtacgc cgactaccag tgtcccttct gtcagacctt
     3121 cgccaccctc cagatgccta ccatcgagga gcggctgatc aagaccgggc ggctgcgctg
     3181 gcgctaccgc gacttccccc tccagcagca tccgttcgcc cggctggccg cccactcggc
     3241 ggcctgtgcc gaggagcagg ggaagtactg ggagcagcac gaccggatct acgaagggca
     3301 ggccgagtgg tccgccgcgc gggatgccgg ggatcacttc cgggagtacg cgaaggggtt
     3361 gagtctcgac ctggaccggt acgacgagtg catggagtcc ggccgctacg ccgggcggat
     3421 ccaggccagc tacgaggaag gggcccgggc cggcgtggcc tccaccccca ccctgctggt
     3481 gggcaaccgg ctctaccagg gccggatcga ctccgatgcg atccggcgcc tcgtggattc
     3541 gctgagcccg cccacgccat gagcgacgag gagagcgcgg ccgcgcggcg cgggaactcc
     3601 tgagtggcac tcgaccccaa ggcgccaccc cgtggcaagg cactggcggc cttggccttc
     3661 accgcgctcg gggtggtgta cggcgacatc gggaccagtc cgctgtatgc catcaaggag
     3721 tgcttcagcg ggctccacag catcgagccc acccgcgaga acgtcatcgg ggtcctctcg
     3781 ctgatcttct ggtcgctcaa tttcatcgtc tcgttcaagt acatcacctt cgtccttcgg
     3841 gcagacaacc ggggcgaggg cggcaccttc gccctgctgg cccaggtgcg gcccctctcc
     3901 cgggcggtcg gcggccggcg ggtcctcgtc gcgctcggtc tcttcggcgc ctccctgctc
     3961 ttcggcgaag gggtgatcac cccggcgatc tcggtgctcg gcgcgatcga gggcgtcacg
     4021 ctcgcggcgc cgggtgtcgg cccgctgatc tggccgatcg cggcactggt gctgaccgcg
     4081 ctgttcgcgg tgcagaagcg ggggaccgaa cagatcggcc ggatgttcgg tccggtcatg
     4141 gcggtctggt tcacctcgat cgcggtgctc ggcgttcggg ggatcctgat ggccccagag
     4201 gtgctgcggg cgctgagccc ctggtacgcg gtcgacttct tcattcgaga cggcctggcg
     4261 ggcttcctga ttctgggctc ggtcgtcctg gtcgtgaccg gctcggaggc gctctacgcc
     4321 gacatgggcc acttcgggcg gcgcccgatc cggctgacct ggttcgccgt cgtgctcccc
     4381 tgcctggtga tcaactactt cgggcaggcc gcactgctgc tgacggatcc gcgggcgcgg
     4441 gcgaacccct tcttctcgct ggcgccggaa tgggccctct accccatgat cggcatcgcc
     4501 acggcggcgg ccatcgtggc ttcgcaggcc ttgatctccg gcgccttctc gctgacgcgc
     4561 caggcggtgc agctggggta catccccagg gtgacgatcg tccatacgtc cagcacccag
     4621 atcgggcaga tctacatccc cgaggtgaac tgggcgctgt ggatcggatg tatcgcgctg
     4681 gtcgtgggct ttcgcagcgt caccaacctc gccggggcct acggcgtggc ggtgaccggt
     4741 accatgatcg tgacgacgct gctgctgcac acggtggcgt gtgaccggtg gcactggcct
     4801 cgctggcggg cccgggcgct caccggcacg ctcctggtcg tggacgtggc gttcttcagc
     4861 gccaacgtca tcaaggtgga gcagggcggc tggttcccga tcgtggtggg gatcggcatg
     4921 tacctgctga tgacgacctg gaaccggggc cgggcccggc tccaggccat cgtccgcgag
     4981 aacacgctgg ggatggacct cttcctcgcc gacgtcgcgc gccggcagcc gccgcgggtc
     5041 ccgggcaccg cggtcttcct cacctcggac atcggcggcg cgccgccggt gctgctgcac
     5101 cacctcaagc acaacaaagt gctccacgag aaggtcatgc tgatgtccgt ggtgaccgag
     5161 gagattccca cggtggacga ggacgaccgg gtggagtgcg aggagctggg ggaagggttc
     5221 tacaaggtca tcgcccacta cggcttcatg gagtcccccg acatcccggc ggcgctgggg
     5281 cagctgggga gggcgggggc cgacggccgg ccgctggcca tcaaggccat ggaaaccagc
     5341 ttcttcctgg gccgggagac gctgatcgcc acgcggaacc cgccgacgac caccccggta
     5401 cccgacgcga tcgggcggat ggcgatgtgg cgcaagcggc tgttcatcct catgacgcgg
     5461 aacgcgcgct cggcgaccgc cttcttcgga cttccgccga accgggtggt ggagctgggg
     5521 gcgcagatcc agttctgacc gcctaccgtc ttaccgcctt cccgccttac tgccttccgc
     5581 ccttaccgtt tcgcgtcgtt tgcggtagac tctcgcggag tacaccgcaa cggttgtcac
     5641 ccccggggtg atcgccgttc gtaagtgatt cggctcgacc ggtttatccc cactggcatc
     5701 ggactcgcct tttctctggc gcagccgcga cactaccgtc cggcgaggcg tcgatccgcc
     5761 cgataagagc acacccggag tgatccgggg ccgcaaaact agaggtctca cccgacgatg
     5821 gtgagatagc tcggtgccga aggagtatcg atgaggtccc cgcaggaggt ggagcgcggt
     5881 ctgtccgcgc ccgacacgct cgggctcgag tcccgggtcg aaatccgcaa ggcggcgttc
     5941 cagctgctgg aggcgatgcc ggagggaacc ggacggctgg tcatcgacct cggccacacc
     6001 cggcacatcg attccgcggg actcggcgcc ctgatgctga tccagcggct ggccgccgag
     6061 cggcgacaga ccgtggtgct gcgcaatccc agcgaggaaa tccgctttct cctcgtcctc
     6121 accaagctcg acgatctctt cctggtcgaa gccgatgacg actgagcgag cgctccgcca
     6181 cggcggagcg ctcggctatg gacgcgtccc gcgcgaccga ttagtctacc ccgctgacgg
     6241 ctcactcctt aaccacggtg ccgcgcggca ccggttcgcg gggtgcgagg catgacccag
     6301 gcgacgcgcc gccggcgggt gctcatcgtg gaggacgagc cggcgctgcg gctcagctac
     6361 gatcgggcct tccggccccg gtatgatctc gcgttcgcca gcaacggcgc cgaggccatg
     6421 gaaaagctgg agcagcatca gccggaggtg gccgtgctgg acatgcggct gcccgatacc
     6481 gacggcatcg agctgctgcg gcggatccgg gtctcgcacc cccacctccc cgtcatcatc
     6541 accaccgcct atctgagcat cgagccgcag ctgaaggtgc tcgacctccc gcactccgga
     6601 tacatcgtca aacccttccg tctcgacgag ctcggcgcgc gcatcgatgc cgtcctctga
     6661 cggcgccgcg ggccacccat tgctggaggc tcgggggctg aagcggtcgt tcggcggact
     6721 gcgcgtcctg cgcggtctcg atctcgtgct gcgggcgggc gaggcggtcg tggtcgcggg
     6781 ccccaacggc gccgggaaga cgacgctgct ccgggtgttg gcggggctca tgcggcccga
     6841 ggcgggtgag gttcgcgtgc tcggccaccc ggtgcggggc gccgatgccc tcgggcggcg
     6901 cgccctcggc ttcgtgtcgc accagtcgct gctctacgac gacctcagcc tggcgcagaa
     6961 cctcgccttc gcggcccggc tgtatcggct gccgcggccg ggcgaggtgg cccggcgcgc
     7021 cttggagacg gcgggtctcg ccggccgcgc cgacgagtcc ccccgccggc tgagccgggg
     7081 gatggcgcag cgggcggcga tcgcccgggc gctcctccac gggccccggg tcctgctcct
     7141 ggacgagccg ttcaccgcgc tcgacgccgc gtcggccgat cggttgcggg ccgagctggc
     7201 cgcgcgactc gccgaggggc tcgggatggt g
//
LOCUS       DASUYN010000015         2710 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_446244, whole genome shotgun sequence.
ACCESSION   DASUYN010000015 DASUYN010000000
VERSION     DASUYN010000015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2710)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2710)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2710
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_446244"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1055)
                     /locus_tag="VF061_00335"
     CDS             complement(<1..1055)
                     /locus_tag="VF061_00335"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF012789.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase"
                     /protein_id="HEX6667968.1"
                     /translation="MTATSGIAAAPTIGEGPVPTPAQRRAIEAPAGPVLVVAGPGAGK
                     TFCLIGRIGHLTRTLGIAPRRICAVTFTNKAADEIAARLRRDIGPEAADEITRGTLHS
                     LCLALLREQASLMGLRRGFGLADEDYQKRVLRRLRVRPERQPALLRIFGRHQLEHVPL
                     SAPDLELFEAYREALRARGLLDYNDLIALAGELLRRHPQEARAIRARWDAILVDEFQD
                     LSLAQYEVITGLAGEHRHCFAVGDDEQSIYSWAGADPRILERFRDDFEVGAPIVLDRN
                     RRCSRQIFEAARRVIARNPALFEKRLEADRDSEHCVVSQAFDDDVEEAEWLLEDLRRD
                     REACGLEWGEYALLYRT"
     gene            complement(1084..2619)
                     /locus_tag="VF061_00340"
     CDS             complement(1084..2619)
                     /locus_tag="VF061_00340"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HEX6667969.1"
                     /translation="MHLFETVIVLLLIGAALAALARRVGAPYPALLALAGAGLALLPG
                     TPVVTLDPELALVLFVAPVLLDAAFDASPRDLRHHWRPVAGLALLTVGVTVAVVAVTV
                     RALVPDMPWAAAVALGAVVAPPDAAAATAVLRQLRPPHRLLVILEGESLFNDASALLI
                     YRLAVGVAAGGALSGWDVVPTLLFVTAGSIGLGVVLAPLTLGVTARIHDVATAVIVQF
                     SSTFFVWILAERLGLSGILTMVVYAMSVARTAPDLMPARLRIPSYAVWEVAVFVLNAL
                     AFILVGLQLKPILAQLGRAELLEYAGVAGAICATVILTRVVWVLGTHALRGPHTPQGR
                     RGAMVVAWCGMRGTVTLAAALALPAGFPYRDLVLFTSFLVVLGTLVIQGLTLKPLMTA
                     LGLEHDDAVEREVRLARVETLRAGAAALADGVAGTEAAKLLLRQYEVRLAQAETRQGA
                     DEAWGDAPRDLSAAALTATRAERRRLSELRADGTIGDDAFHRVEEELDRAELGAQAMD
                     PEG"
BASE COUNT          417 a          968 c          999 g          326 t
ORIGIN      
        1 tgggtgcgat acagcagggc atactcgccc cactccagtc cgcacgcctc acggtctcgc
       61 cgcaggtcct ccagcagcca ctccgcctcc tccacgtcgt cgtcgaaggc ctgggagacg
      121 acacagtgct cggagtcgcg gtcggcctcg agccgcttct cgaacagtgc cgggttgcgg
      181 gcgatgaccc gccgggccgc ctcgaagatc tgccgggagc aacggcggtt gcggtcgagg
      241 acgatcggag cgccgacctc gaagtcgtcc cggaaccgct ccaggatccg ggggtcggcg
      301 ccggcccagg agtagatgga ctgctcgtcg tcacccaccg cgaagcagtg gcggtgctcc
      361 cccgcgagcc cggtgatcac ctcgtactgg gcgaggctca ggtcctggaa ttcgtccacc
      421 aggatcgcat cccagcgggc gcggatcgcc ctcgcttcct gcggatggcg ccggagcagc
      481 tcgccggcga gggcgatgag atcgttgtag tcgaggagcc ctcgcgcccg gagtgcctcg
      541 cggtacgcct cgaacagctc gaggtcggga gcgctcagcg gcacgtgctc cagctggtgg
      601 cggccgaaga tgcggagcag ggcgggctgg cgctcggggc gcacgcggag gcggcggagt
      661 actcgcttct ggtagtcctc gtccgccagg ccgaacccac ggcgcagccc catgagcgag
      721 gcctgctccc gaagcagtgc cagacagaga gagtggaggg tgccgcgggt gatctcgtcc
      781 gccgcctcgg ggccgatgtc gcgccggagc cgggcggcga tctcgtcggc cgccttgttg
      841 gtgaaggtga ccgcgcagat ccgccgggga gcgataccga gcgtccgggt gaggtggccg
      901 atccggccga tcaggcagaa ggtcttcccc gccccgggcc cggccacgac gaggaccggg
      961 ccggccggag cctcgatggc gcggcgctgg gcaggggtcg gaaccgggcc ctccccgatg
     1021 gtcggggcgg cggcgatccc ggatgtggcg gtcatcggcc aaagatactt cagcggagtg
     1081 acttcagccc tcgggatcca tggcctgcgc gcccagctcc gcacggtcga gctcctcctc
     1141 gacccggtga aaggcgtcgt cgccgatggt gccgtccgcg cgcagctccg acagccggcg
     1201 ccgctcggcc cgggtggcgg tcagcgccgc cgccgacaga tcgcgggggg catcgcccca
     1261 ggcctcgtcg gcgccctgtc gggtttccgc ctgggccagt cgcacctcgt actgccggag
     1321 gagcagcttc gccgcctcgg tgccggcgac gccgtccgcc agcgccgcgg ccccggcccg
     1381 cagtgtctcc acccgggcca gcctcacctc gcgctccacc gcgtcgtcgt gctcgagtcc
     1441 gagcgccgtc atgagcggct tcagcgtcag tccctggatc accagcgtgc ccagcaccac
     1501 gaggaaggac gtgaacagga ccaggtcccg gtaggggaag cccgccggca gcgctagcgc
     1561 ggcggcgagc gtgaccgttc cccgcatccc gcaccaggcc acgaccatgg ccccgcgccg
     1621 gccctgcggc gtgtgcgggc cgcgcagcgc atgtgtcccc agcacccaca cgaccctggt
     1681 gaggatcacg gtcgcgcaga tcgccccggc gacgccggca tactcgagca gctcggcgcg
     1741 gcccagctgc gccaggatgg gcttgagctg gagacccacc agaatgaaag ccagcgcgtt
     1801 gagcacgaag accgccactt cccacaccgc gtaggacggg atccgaagcc gggccggcat
     1861 gaggtcgggc gcggtgcgcg ccaccgacat ggcgtagacc accatggtga gaatgccgga
     1921 gagtcccagc cgctccgcca ggatccacac gaagaacgtg gacgagaact ggacgatcac
     1981 cgcggtggcg acgtcgtgga tccgcgcggt gacccccagg gtcagtgggg ccagcaccac
     2041 gccgagcccg atgctgccgg cggtgacgaa gaggagggtg ggcacgacgt cccatccgga
     2101 gagcgctccc ccggccgcga cgcccacggc gagccggtag atgagcagcg cgctggcgtc
     2161 gttgaagaga ctctcgccct cgaggatgac gagcaggcgg tggggcggcc ggagctggcg
     2221 cagcaccgcg gtggcggccg ccgcgtcggg cggggccacg accgcgccca gcgcgaccgc
     2281 ggcggcccag ggcatgtccg gcaccagggc gcgcaccgtc accgccacca ccgcgacggt
     2341 gactccgacg gtgagcagcg ccaggccggc caccggccgc caatggtgcc ggaggtcgcg
     2401 gggcgaggcg tcgaatgccg catcgagcag caccggcgcc acgaacagca ccagggcaag
     2461 ctcgggatcc agggtcacca cgggggtgcc ggggaggagc gccaggccgg ccccggcgag
     2521 ggccaggagc gcgggatacg gcgcccccac cctgcgcgcc agggcggcga gggcggcgcc
     2581 gatcagcagc aggacgatga cggtctcgaa gaggtgcaag cgcggtccag gaagaggtgg
     2641 cggctccgcc gccgtgagat gggccacggc ggtcgcccgg ctttcctcca agcattacga
     2701 cattcaccgt
//
LOCUS       DASUYN010000016         5463 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1549109, whole genome shotgun sequence.
ACCESSION   DASUYN010000016 DASUYN010000000
VERSION     DASUYN010000016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5463)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5463)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5463
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1549109"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1099
                     /locus_tag="VF061_00345"
     CDS             <1..1099
                     /locus_tag="VF061_00345"
                     /inference="COORDINATES: protein motif:HMM:TIGR02453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TIGR02453 family protein"
                     /protein_id="HEX6667970.1"
                     /translation="GRGAARGPGDDQGRKGSAGPVYRSPVSSVPPGSHFPGDAAVSWF
                     VYLARCADGTLYTGVTTDVAARERAHNAGRGAAYTRSRLPIAIVHSEAASDRGAALRR
                     ELAIKRLTRRGKEALVAGKTTAGGFEGFGPAALGFLRRLERNNRRDWFERNRPTYERE
                     IRDPMRALVEEMDVRLARLAPELVGDPKRSIFRIHRDTRFSADKSPYKTNAACQFYHC
                     DAGRGAGQDAEGAGAGLYFRIARGECFVAGGMWMPARAALDRIREAIADAPEDFEAII
                     RARAFRRRFRALDREALLKRMPRGYAETHPAADWLRYRSFTATRVMREGEIQNPRLPD
                     LLARDFAALVPLVRWLNAAIGYRPLERRLLS"
     gene            complement(1096..1650)
                     /locus_tag="VF061_00350"
     CDS             complement(1096..1650)
                     /locus_tag="VF061_00350"
                     /inference="COORDINATES: protein motif:HMM:NF027567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEX6667971.1"
                     /translation="MTKAADRNRDEAPLGKKLEDLYELIDGIEIAMFTTRRPDGHLVS
                     RPMATQTQAEGSDLWFVTDIDAHKLDELEFDPHVNLAYYRDGTREWVSVSGTAAVTQD
                     RRAIHELYRPDWKAWFGDEGGERNGGPDDPRLALILVDVHSVSYLKVDKPKPLVLFEV
                     AKAMVTGTPPNVGEQRHLTRSELG"
     gene            complement(1711..2298)
                     /locus_tag="VF061_00355"
     CDS             complement(1711..2298)
                     /locus_tag="VF061_00355"
                     /inference="COORDINATES: protein motif:HMM:NF021505.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2231 domain-containing protein"
                     /protein_id="HEX6667972.1"
                     /translation="MESRFKLAGHPLHQMLIVFPLGLLATAVVFDVIFLVTDNPAWAQ
                     SAFYMIGAGVITGLLAAVPGTVDWMAIPRGTRAKRIGLIHGVGNVIVVTLFALSWYLR
                     REDPALPPTGAVVGGLLGAGIAVVTGWLGGELVGRLGVGVDDGAHLDAPSSLTSQSAT
                     ATTASRTGTGSSWAGRERRHFPQPAYAGVDRRRHA"
     gene            complement(2422..4737)
                     /locus_tag="VF061_00360"
     CDS             complement(2422..4737)
                     /locus_tag="VF061_00360"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HEX6667973.1"
                     /translation="MLLTQLPLLFQLAAAPAPDQFLPGVGYHMDAPRAAATDSLLDGA
                     REALERGRPWQASLLVAPVVDDSAQRTPSAVFLAATAASRWGGWPEVGRLLAGEAWLD
                     SLFDGRGRVLLARSAMERGDDSLALTHALAAPRGRDAEAEGERLFLLASALDRVDARD
                     SAAAVYQHAAAVLPAVSDWILLKAAAVTDDSAARAGIYDRIRLPLARERIRWTDAAAL
                     ERAGDLEGAARRYQEMGARLTAVRLRLAMGAGGATAAGGSRDEIRRDLLAMVTAGGPA
                     REVRGAIGLLDSVFTPLTGEEELLVARAADEAGLAARAASGYPKALAAGLGGQTERYG
                     YASALAKLGRNAEAAAQFKLVRSPSWAVASAAYLRARSLVRDGQAVKGRGELVEIPVK
                     YPKDTTAASSALFLLGDLASDDRADRLARTYYRRAAVRYPTSRFAAAARFRAAMVELL
                     TGEAAMAAREFDELARRYPRSDEAPASVYWAGRAWAIAGDSLKAHARWRKSTQGDPAS
                     YYASLAARRLGLPVWVPPPAADTFIPVPDADSAVARAALLGRLGLTTEGRREHEWLVR
                     SAESSSERLLAVANALRGQGLASQAIQLARRALAKGAPADARTYRLLYPVVHQDALLA
                     EASEQGLDPSFVAALIRQESMFNPAATSPAGARGLMQVMPQLGGRLATSLSYPVWDPV
                     LLYQPDVSLQLGSYHLQELAVRYTEPSHVLAAYNAGASRVERWAKRTGVDDPEVFAER
                     IPFVETRGYVRIISRNQELYRSLYQWPEGSS"
     gene            4893..5294
                     /locus_tag="VF061_00365"
     CDS             4893..5294
                     /locus_tag="VF061_00365"
                     /inference="COORDINATES: protein motif:HMM:NF013633.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S4 domain-containing protein"
                     /protein_id="HEX6667974.1"
                     /translation="MSDPEAGQEKVRLDKWLWAARFFKTRALAAEAVQGGKVQVNGDR
                     PKRARPLQLGDEIRVRLGPYEHIVTVRGLSDRRGPAVEAAALYEETGASRNAREALAI
                     QLKSLHSLFGPEKGRPTKKDRREIERLKGRR"
BASE COUNT          786 a         1965 c         1947 g          765 t
ORIGIN      
        1 tggccgcggc gcggcgcggg ggccgggaga tgaccagggg cggaagggca gcgcgggacc
       61 agtgtatcgg tcgcccgtct cctcagtgcc acctggcagt cacttcccgg gtgacgccgc
      121 cgtgagctgg ttcgtctacc tcgcccggtg cgccgacggc accctctata ccggcgtcac
      181 caccgacgtc gccgcccggg agcgcgccca caacgccggg cgcggcgcgg cctacacccg
      241 gtcacggctc cccatcgcca tcgttcactc ggaggcggcg tccgaccgcg gtgccgcact
      301 gcgcagggag ttggcgatca agcgactgac acgaaggggc aaggaggcac tggtggcggg
      361 taagaccacc gctggagggt tcgagggctt cggaccggcg gcgctgggtt tccttcgcag
      421 gctcgagcgc aacaaccgcc gtgactggtt cgagcggaat cgtccgacct acgagcgcga
      481 gatccgcgac ccgatgcggg cactggtgga ggagatggac gtgcgcctgg cccggctggc
      541 gcccgagctg gtcggcgatc cgaagcggtc gatcttccgg atccatcgcg acacccgttt
      601 ttcggccgac aagtcaccct acaagaccaa cgccgcctgc cagttctatc actgcgacgc
      661 gggacgcggg gcgggccagg atgcggaggg tgccggcgcg gggctgtatt tccggatcgc
      721 gcgtggagag tgtttcgtgg cgggaggcat gtggatgccg gctcgcgccg cgctggaccg
      781 gatccgcgaa gcgatcgcgg acgcgccgga ggatttcgag gccatcatca gggcccgggc
      841 cttccggcga cggttccgtg cgctcgaccg ggaagcgctg ctcaagcgca tgccgcgcgg
      901 gtacgccgag acccaccccg ccgcggactg gctccgctac cgctccttta ccgcgacgcg
      961 agtgatgcgc gagggcgaga tccagaaccc ccgtcttccg gacctgctgg cccgggactt
     1021 cgcggcgctg gtgcccctcg tgcgctggct caacgccgcg ataggctacc gtcccctgga
     1081 gcggcggctg ctgagctaac cgagctccga ccgggtcagg tggcgctgct cgcccacatt
     1141 cggcggcgtc ccggtcacca tcgccttcgc cacctcgaac agcaccaggg gcttcggctt
     1201 gtccaccttg aggtagctga cggaatgcac gtccaccagg atcagcgcca gcctggggtc
     1261 gtcgggcccg ccgttccgct cgcctccctc gtccccgaac caggccttcc agtccggccg
     1321 gtacagctcg tggatggcgc ggcggtcctg ggtcacggcg gccgttccgc tgaccgaaac
     1381 ccattcgcgg gtgccgtcgc ggtagtaggc gaggttcacg tggggatcga actccagctc
     1441 gtcgagcttg tgggcgtcga tgtcggtcac gaaccagagg tcggaaccct ccgcctgcgt
     1501 ctgcgtcgcc atcgggcggg agaccaggtg cccgtccggc cgccgggtgg tgaacatcgc
     1561 gatctcgatc ccgtcgatca gctcgtagag gtcctcgagc ttcttaccca ggggcgcctc
     1621 atcgcggttg cggtcggcgg ctttggtcat ggtcacgctc ctcgttggtt ggggtcgccg
     1681 gcacatcgcc atgggccttc gggacgacgc ttacgcgtgc cgtcgccgat cgacccccgc
     1741 gtaggccggc tgtggaaagt gccgccgctc gcggccggcc cagctcgaac cggtcccggt
     1801 ccgcgacgca gtggtggctg tcgccgactg gctcgtgagc gagctcgggg cgtccagatg
     1861 ggccccgtcg tccaccccga cgccgaggcg acccaccagc tccccgccca gccagcccgt
     1921 gaccacggcg atcccggcgc ccagcagccc gccgaccacc gccccggtcg gcggcagcgc
     1981 cgggtcctcg cgccgcaggt accagctcag ggcgaacagc gtcacgacga tgacgttgcc
     2041 cacaccatgg atcagcccga tccgcttggc gcgggtcccc cgcgggatcg ccatccagtc
     2101 cacggtgccc gggaccgcgg cgagcaggcc ggtgatcact ccggcgccga tcatgtaaaa
     2161 ggccgattgg gcccaggcag gattgtcggt cacgaggaag atcacgtcga agaccaccgc
     2221 ggtcgccagg aggccgagcg ggaagacgat cagcatctgg tgcagggggt ggccggcgag
     2281 cttgaatcgg ctttccatgg cgatacccat cggcgctgag gttgaccttg gaccctcccg
     2341 attctgagag aagatgccct gcgagggccg gacgggatgt gatgcaggtc gcgcctgagg
     2401 caattgtcac gtcgccgtcg cctaggagct gccttccggc cactggtaca gcgaccggta
     2461 cagctcctgg ttccggctga tgatccgcac gtagccccgg gtctccacga acgggatccg
     2521 ctcggcgaac acctcgggat catccacgcc cgtccgcttg gcccagcgct ccacccggct
     2581 cgcgccggcg ttgtacgccg cgagcacgtg gctcggctcg gtgtagcgga ccgccagctc
     2641 ctggagatgg taagacccca gctggaggct cacgtcgggc tggtacagca gcaccgggtc
     2701 ccacaccggg tagctcagcg atgtcgccag cctcccgccc agctgcggca tcacctgcat
     2761 caggccccgc gcaccggccg gagaggtggc cgcgggattg aacatggatt cctgccggat
     2821 cagcgccgcc acgaaactgg ggtcgagccc ctgctccgag gcctccgcca ggagcgcgtc
     2881 ctggtgcacc accggataaa gcaggcggta cgtccgggca tccgccgggg cccccttcgc
     2941 cagcgccctc cgggcgagct ggatggcctg ggaggccagc ccctggcccc gcagtgcgtt
     3001 cgccaccgcg agcaggcgct cgctgctcga ctccgccgat cgcaccagcc actcgtgctc
     3061 cctgcggccc tcggtcgtga gccctagccg gccgagcagc gcggcgcgcg ccacggcgga
     3121 gtcggcatcg ggcaccggga tgaaggtgtc ggccgccggt ggcggcaccc agaccggcag
     3181 tcccagccgt cgggcggcca ggctggcgta gtacgaggcc ggatctccct gggtggactt
     3241 ccgccagcgg gcgtgcgctt tcaggctgtc ccccgcgatg gcccaggccc ggcccgccca
     3301 gtacaccgag gcgggcgcct cgtcgctccg tgggtagcgc cgcgccagct cgtcgaactc
     3361 gcgggcggcc atcgccgcct caccagtcag cagctccacc atggccgcgc ggaagcgcgc
     3421 ggcggcggcg aaccggctgg tcgggtagcg caccgcggcc cggcggtagt aggtccgcgc
     3481 caggcggtcg gcccggtcgt cggaggccag gtcgccgagc aggaacaggg ccgaggaggc
     3541 ggcggtggtg tccttgggat acttgaccgg gatctcgacc agctccccac ggcctttcac
     3601 cgcctggccg tcccgcacca gcgagcgcgc gcggaggtac gccgccgagg cgaccgccca
     3661 ggacggtgag cgcaccagct tgaactgggc ggcggcctcg gcattccgcc ccagcttggc
     3721 gagcgcggaa gcgtagccgt agcgctcggt ctgcccgccg agccccgcgg ccagtgcctt
     3781 ggggtacccc gaggcggccc gggcggcaag cccggcctca tcggcggcac gggccaccaa
     3841 cagctcctcc tccccggtga gcggggtgaa gacgctgtcc agcaggccga tcgcgccgcg
     3901 aacctcccgg gcgggaccac cggcggtgac catggcgagc aggtcgcgac ggatctcgtc
     3961 ccgggacccg cctgccgcgg tggcgccgcc ggcgcccatc gcgaggcgca ggcgcacggc
     4021 cgtcagccgg gcgcccatct cctggtagcg acgcgccgcc ccctccaggt cgccggcgcg
     4081 ctccagggcg gccgcatcgg tccagcgaat ccgttcccgc gccagcggca ggcggatccg
     4141 gtcgtagatc cccgcccggg cggcgctgtc gtcggtcacc gcggctgcct tcaggaggat
     4201 ccagtccgag actgccggca gcaccgccgc cgcgtgctgg tagacggccg ccgcgctgtc
     4261 gcgcgcatcc acccggtcca gggccgatgc gaggaggaag agccgctcgc cctcggcctc
     4321 ggcgtcgcgc ccacgaggcg ccgcgagggc atgcgtcagc gccagtgagt cgtccccccg
     4381 ctccatcgcc gagcgcgcga gcaacaccct gccccgtccg tcgaagagcg agtccagcca
     4441 ggcttcgccg gccagcagcc gccccacctc gggccagccg ccccaccggc tggctgcggt
     4501 ggccgccagg aacacggccg aaggcgtccg ctgggccgag tcgtccacca ccggcgccac
     4561 cagcaggctt gcctgccagg gccggccccg ctccagcgcc tcacgggcgc cgtcgagcag
     4621 ggaatcggtg gcggcggcgc gcggcgcgtc catgtggtac cccacccccg gcaggaactg
     4681 gtcgggggcc ggcgcggcgg cgagctggaa cagcagcggg agctgagtca ggagcatggg
     4741 acccggggat gtcggagtgg tggagggaag acggggctgc aaatgtcacg ccttcccctc
     4801 gcccctcctc agcgggtata acagccgaag tgcggcgaga gtgccctgtg attgtgcgcc
     4861 atctgttgca ctttggggtg tactattagg tcatgagcga ccccgaggcg ggacaggaga
     4921 aagtgcggct ggacaagtgg ctgtgggccg cgcggttctt caagacccgc gcgctcgccg
     4981 ccgaggcggt ccagggaggc aaggtccagg tcaacgggga ccgtcccaag cgggcccgtc
     5041 cgctccagct gggggacgag attcgggtcc gtctcggtcc ctatgagcac atcgtcaccg
     5101 tgcggggcct ctcggaccgg cgtggcccgg cggtcgaggc ggcggcgctg tacgaggaga
     5161 ccggggcgag ccggaacgcc cgggaggccc tcgcgattca gctcaagtcg ctgcactcac
     5221 tgttcggccc cgagaagggg cggcccacga agaaggatcg gagggagatc gagcggctga
     5281 aggggcggcg gtgagtatcg ggatgatcac tacatgttcc cgaccatcgc ctccccgaac
     5341 tccgaagtct tgagcagcgt cgcgcccggc atcagccgct cgaagtcgta ggtcacccgc
     5401 ttctgagcga tggtgcgctc cagcgacgcg atgatcaggt cggcggcctc gttccagccc
     5461 agg
//
LOCUS       DASUYN010000017         2012 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1769598, whole genome shotgun sequence.
ACCESSION   DASUYN010000017 DASUYN010000000
VERSION     DASUYN010000017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2012
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1769598"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            96..791
                     /gene="phoU"
                     /locus_tag="VF061_00370"
     CDS             96..791
                     /gene="phoU"
                     /locus_tag="VF061_00370"
                     /inference="COORDINATES: protein motif:HMM:TIGR02135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0051049 - regulation of transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HEX6667975.1"
                     /translation="MSVDVHRHFHDELSHTKVRLLTMSGEAEAALSLAVEALLERDDE
                     KAQRVIKGDRVIDSMEVEIEEQCINLLALQQPMARDLRMLTSALKIANDLERVGDHAV
                     NIAQSAERLAQSRPIAPEPEIVEMARLARDMLSDALEAFIRGDAAAGREVCLRDDKVD
                     QLHRSVFRILLTHMMEDPHMIGAGMELFLVSRNLERVADLATNIGEDVVFLVEGKSIK
                     HHAEDRGEAKATA"
     gene            788..>2012
                     /locus_tag="VF061_00375"
     CDS             788..>2012
                     /locus_tag="VF061_00375"
                     /inference="COORDINATES: protein motif:HMM:NF014587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA phosphatase family protein"
                     /protein_id="HEX6667976.1"
                     /translation="MTDGGNGAERERIAAIDVGSNSVRLLVAEYDAASGLTIVDELKD
                     QPRLAAGLARTGCLNEAAMDRAIQTLGRMREVCQRRGVRRIAAVATAAVREADNGPWF
                     VRRVRQELDIPLLIIDADTEAALSYRSVAHHFPLAGARALVADIGGGSLELIGAVDGL
                     VELTLSLPLGAVRLTELYLTGERSVQRELGVLRKHVRKQLKRELSNREWAAATVIGSG
                     GTFTTLGRVSRARRGLPAGESVHGVAVDTAEVERLLDWLASRSPEQRRQVPGLNPERA
                     DIILAGLAVTAELLDWVRTRSLTVSAFGLREGLLLEMAGAEEPVVRDPLRLFREFAER
                     CQSDRRHVEHVRRLALQLFEQLGEALGCGPEEQLLLEAASLLHDVGQLVSYPKHHKHS
                     YSLITHAERLGLSPRD"
BASE COUNT          309 a          701 c          726 g          276 t
ORIGIN      
        1 gaccgcggag cgctggtgga gttcgacgac accgagcgga tcttcaccag cccggcgcac
       61 gagcggactg aagcctacat caccgggaga ttcggatgag cgtcgacgtc caccgccatt
      121 tccacgacga gttgagccac accaaggtgc gcctgctcac catgtcgggc gaggcggagg
      181 cggcgctgag cctggcggtg gaggcgctgc tggagcggga cgacgagaaa gcccagcgcg
      241 tcatcaaggg cgaccgggtc atcgacagca tggaggtgga gatcgaggag cagtgcatca
      301 acctcctcgc cctgcagcag cccatggccc gggaccttcg gatgctcacc tccgcgctca
      361 agatcgccaa cgacctcgag cgggtgggcg accacgccgt caacatcgcc cagtccgccg
      421 agcgtctggc ccagagccgg ccgatcgcgc cggagccgga gatcgtggag atggcccggc
      481 tcgcgcgcga catgctctcg gacgcgctcg aggccttcat ccgtggtgac gcggccgccg
      541 ggcgcgaggt ctgcctccgc gacgacaagg ttgaccagct ccaccggtcg gtgttccgta
      601 ttctgctgac ccacatgatg gaagacccgc acatgatcgg cgcgggcatg gagctcttcc
      661 tcgtgagtcg gaacctggag cgggtggcgg atctcgccac caacatcggc gaggacgtgg
      721 tcttcctggt ggagggcaaa tcgatcaagc accacgccga agaccggggc gaagccaaag
      781 cgaccgcatg accgacgggg gcaacggcgc cgagcgggag cggatcgccg cgatcgacgt
      841 cggatccaac tcggtgcggc tgctggtcgc cgagtacgac gccgcctcgg ggctcaccat
      901 cgtggacgag ctcaaggacc agccgcgcct cgcggccggc ctggcccgca ccggctgcct
      961 caacgaggcc gcgatggacc gcgcgatcca gaccctcggc cggatgcgag aggtctgcca
     1021 gcggcgcggc gtgcgccgga tcgccgccgt ggccaccgcc gccgtgcggg aagcggacaa
     1081 cggcccctgg ttcgtccgcc gggtccgcca ggagctcgac atccccctcc tcatcatcga
     1141 tgcggacacc gaggcggcgc tctcctaccg ctcggtcgcc caccactttc ccctcgccgg
     1201 cgcgcgggcc ctggtcgccg acatcggggg cggcagcctg gagctgatcg gcgcggtgga
     1261 cggtctggtg gagctcaccc tctcccttcc gctgggtgcg gtccggctca ccgagctcta
     1321 cctcacgggc gagcgctcgg tccagcgcga gctcggcgtc ctgcgcaagc acgtccgcaa
     1381 gcagctgaag cgggagctct ccaatcgcga gtgggcggcg gcgacggtga tcggctcggg
     1441 cggtacgttc accacgctgg ggcgggtcag ccgggcccgg cgcggactgc cggcggggga
     1501 gtcggtgcac ggcgtcgcgg tggataccgc ggaggtggag cggctcctcg actggctggc
     1561 gagccgctcg ccggagcagc ggcggcaggt gcccggactg aatcccgagc gggcggacat
     1621 catcctcgcc ggcctcgccg tcaccgccga gctgctcgac tgggtgcgga ctcgcagtct
     1681 gacggtgagc gccttcggtc tgcgggaggg gctgctgctg gagatggcgg gggcggagga
     1741 gccggtggtg cgcgacccgc tccggctctt ccgggagttc gccgagcgct gtcagtccga
     1801 ccgccgccac gtggagcacg tccgccgcct ggcgctccag ctcttcgagc agctgggcga
     1861 ggccctcggc tgcggacccg aggagcagct gctgctggag gcggcgagcc tgctccacga
     1921 cgtaggccag ctggtgagct accccaagca ccacaagcac agctacagcc tcatcaccca
     1981 cgccgagcgt ctgggactgt cgccgcggga tc
//
LOCUS       DASUYN010000018         2013 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1108857, whole genome shotgun sequence.
ACCESSION   DASUYN010000018 DASUYN010000000
VERSION     DASUYN010000018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2013)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2013)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2013
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1108857"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..527)
                     /locus_tag="VF061_00380"
     CDS             complement(<1..527)
                     /locus_tag="VF061_00380"
                     /inference="COORDINATES: protein motif:HMM:NF025116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HEX6667977.1"
                     /translation="MAAREFLVLSATEPDRTGLLAELTGFIADCGCNVEDSRLVVLGG
                     YAGIMVLLSGLPDQLQAVTDGLEGLRARTGIRAVPRLVRSRQARPSASVSRLEVHASA
                     IDHEGIIHALAETVRRHGANIVELESATEAAPMSGEPLFRLRMMVWSPGGEGPDDALW
                     RALEQVAREEHVDLEV"
     gene            733..1242
                     /locus_tag="VF061_00385"
     CDS             733..1242
                     /locus_tag="VF061_00385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6667978.1"
                     /translation="MPPHSPLTIRVAAKALACLALSGLPLAACDAGAQRQPSAASTEG
                     EDYRLTMPTLHKALPVLYAAEAEEECRRPGEEGRDVRAMSIAEMEQRLEGCPPIRRGA
                     AEQGISLRELALIFNAIMLTSHRLAQEEGAKATGGAAPPLPPGALRDNVALWRQNEAD
                     IARLSGHSK"
     gene            1255..>2013
                     /locus_tag="VF061_00390"
     CDS             1255..>2013
                     /locus_tag="VF061_00390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6667979.1"
                     /translation="MRHGRLVPLLGAAMVAAAGGCGEDVRSAAAAGDGGSGRATAAPL
                     AVRTASVPANPCDWISVDQVAALLGPLDGEAERIRSVEQPEPSDDGRACLYRLAAQPR
                     LGGRGVLVEVSPAAGVLVERVGGAMQEHFAAALRDSGAAAKPRAAPDAGWDSSGHLPM
                     GLVSYIGRVGHVSVFIVSQSPDVPRVALAALAGRIRDRIPDLPFPLPPDPMLEELQRM
                     EGGEPEPPPSGPDPCGLLTQSEAEAVLGKLVVEPY"
BASE COUNT          288 a          748 c          711 g          266 t
ORIGIN      
        1 acctccaggt ccacgtgctc ttcgcgagcc acctgttcga gcgcgcgcca cagcgcgtcg
       61 tcgggacctt ccccgcccgg cgaccagacc atcatacgca aacggaacag cggctcgccg
      121 ctcatgggcg ccgcttcggt cgcgctctcc agctcaacga tgttggcccc gtggcgccgc
      181 accgtctcgg ccagcgcatg gatgatcccc tcgtggtcga tggcgctggc gtggacctcg
      241 aggcgggaga cggacgcgga aggccgggcc tgccgggagc gtaccagccg cggcacggcg
      301 cgaatcccgg tgcgcgctcg cagcccctcg aggccgtcgg tcacggcctg cagttggtcc
      361 ggcaggcccg acagcagcac catgatcccc gcgtagccgc ccagcacgac cagccggctg
      421 tcttccacgt tgcacccgca gtccgcgatg aagccggtca gctcggccag gaggccggtc
      481 cgatcgggct cggtcgctga cagcacgagg aactcgcgag cagccatccc acctccgatg
      541 gggggtcggc caaagatggc cccggcggcg ggagccgcaa cgtcgcgagt aatccgggga
      601 cgctcggcct ggatggcacg cgagtctcca ccggcccgca tgaggcaact tccctggagt
      661 ctgggcgtat ctggcaaccg ccccctggtc ctgcaacgcg tcttaacccg ctcgtccagc
      721 tggaggtacc ggatgccgcc acactcgccg ctcaccattc gcgtcgccgc caaggcgctc
      781 gcctgtctcg cgctttccgg cctgccgctt gccgcctgcg acgcgggcgc gcagcggcag
      841 ccgtccgccg cgtccacgga gggggaggac taccggctca cgatgccgac cctccacaag
      901 gcgctgccgg tgctctacgc ggcggaagcc gaggaggagt gccgccggcc cggcgaagag
      961 ggtcgagacg tgagggccat gagcatcgcc gagatggagc agcgcctgga gggctgccca
     1021 cccattcggc gtggcgcggc cgaacagggc atctcgctcc gggagctggc gctgatcttc
     1081 aacgcgatca tgctgaccag ccaccgcctc gcacaggagg agggcgccaa ggccaccggt
     1141 ggggcggccc cacccctgcc gcccggcgcg ctgcgcgaca acgtcgcgct ctggcgccag
     1201 aacgaggccg acatcgcccg cctgtcggga cactcgaagt agatcggaga gcacatgcgc
     1261 cacggtaggc tggtcccgct gctcggcgcg gccatggttg ccgccgcggg cgggtgcggt
     1321 gaagacgtac gcagcgcggc cgcggcgggg gacggcgggt ccggccgggc aacggccgcg
     1381 ccgctggcgg tccggaccgc cagcgtgccc gccaatccct gcgactggat ctctgtggac
     1441 caggtcgccg ccctcctcgg cccgctcgac ggcgaggccg aacgcatccg cagcgtcgag
     1501 caaccggagc ccagcgacga cggccgcgct tgcctctacc gcctggcggc ccagccgcgg
     1561 ctcggcggcc gaggagtcct tgtcgaagtc tctccggcgg cgggcgtact ggtcgagcgg
     1621 gtgggcggag ccatgcagga gcacttcgcg gcggcgctgc gcgacagcgg cgcggccgcg
     1681 aagccgcggg cggcgcccga cgcgggatgg gactcttccg ggcacctgcc gatgggcctc
     1741 gtctcgtaca tcggccgggt cggccacgtc agcgtgttca tcgtaagcca gtcgcctgac
     1801 gtcccccggg tcgcgctggc cgcgctggcc ggccgaatcc gggaccgcat ccccgatctg
     1861 ccgttccccc tcccacctga tccgatgctc gaggagctgc agcgaatgga aggcggcgag
     1921 ccggagccac cgccctccgg acccgatcct tgtgggctcc tcacgcaatc ggaagcggag
     1981 gccgtgctcg gcaagctggt ggtcgagccg tac
//
LOCUS       DASUYN010000019         6695 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1109496, whole genome shotgun sequence.
ACCESSION   DASUYN010000019 DASUYN010000000
VERSION     DASUYN010000019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6695)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6695)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6695
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1109496"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            62..1975
                     /locus_tag="VF061_00395"
     CDS             62..1975
                     /locus_tag="VF061_00395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase/succinate dehydrogenase
                     flavoprotein subunit"
                     /protein_id="HEX6667980.1"
                     /translation="MALNARIPSGPIQDKWDKHRFEMKLVNPANKRKYTVLVVGSGLA
                     GASAAATLSELGYQVKCFCFQDSPRRAHSIAAQGGINAAKNYRNDGDSIFRLFYDTVK
                     GGDFRAREGNVYRLAQISVNIIDQCVAQGVPFAREYGGLLANRSFGGAQVSRTFYARG
                     QTGQQLLLGAYQQLQKEVALGGVRMFPRTEMLDLVVVDGRARGIVVRDMVTGRIETHV
                     GDAVVLGTGGYGNVFYLSTNAKGSNVTAIWRAHKRGAYFGNPCYTQIHPTCIPQSGDY
                     QSKLTLMSESLRNDGRVWVPLRAGDGRPPDQVPEAERDYYLERRYPSFGNLAPRDIAS
                     RAAKVVCDEGRGVGPGGLGVYLDFADAIQRLGEDAIRERYGNLFEMYQRITDENPYRV
                     PMRIYPAVHYTMGGLWVDYNLMSTIPGLHVIGEANFSDHGANRLGASALMQGLADGYF
                     ILPSTIGDYLATAKLEKIDPSHPECRLVQEEAAVLTRRLLEVKGRRTVDSFHRELGRV
                     MWDKCGMARNAAGLREALARIPELREEFWRDVNVPGSDVELNQALEKAGRVADFLELA
                     ELMCRDALHREESCGGHFREEYQTEDGEALRDDERFAYVAAWEYGGRDAEPRLHKEPL
                     AFEYVHLAQRSYK"
     gene            1972..2742
                     /locus_tag="VF061_00400"
     CDS             1972..2742
                     /locus_tag="VF061_00400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase/fumarate reductase
                     iron-sulfur subunit"
                     /protein_id="HEX6667981.1"
                     /translation="MNLTLHVWRQPSAGAAGRMVRYEARDISPDMSFLEMLDVVNEHL
                     MERGEAPIAFDHDCREGICGSCSLMINGVAHGPNRGTATCQLHMRSFRDGDEIRVEPW
                     RARAFPVVKDLVVDRSALDRIIAAGGYITAPTGGAQDANTILIPKRHVDTAMDAAQCI
                     ACGACVAACPNGSASLFTAAKVTHLGLLPQGQPERFDRAARMVRQMDLEGFGSCTLYG
                     ECQEACPKEISIDTITRMNRDFLRASLTAGRAAVADSD"
     gene            2814..3971
                     /locus_tag="VF061_00405"
     CDS             2814..3971
                     /locus_tag="VF061_00405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6667982.1"
                     /translation="MRAQVAAHAVAALTRADPVPGGAALTELRLVQPALMLRLGGPAR
                     LSLTATLDLVGATMSEGELTPGAYGEGFVDRRHPHTYVHELLLTADDLLGRADGPARV
                     SLTAGKGFAPFGTDDPMSRPVLRYPVNHHLAQVLERAVAVAAVARGRLALELGLFNGD
                     EPERPGQWPSVGRFGDSWSARLTGRPACGLELQVSRAHVHSPEHRAGAGPDQSKWSLS
                     ARYDAPVRGQPVYALVEYARASEAEGFFVFETLLAEGAWTPGRHRLLYRLERTERPEE
                     QRVSRFRTLRPHHENSVLGITRWTVHTAGYSLSLPARGGLTLAPLLEVSVGRVAEVGG
                     GLFDVEQVYGRDTFWTWTLGVRLTLGGGAHRMGRYGAAMAPNGPHRHPDQP"
     gene            3968..5197
                     /locus_tag="VF061_00410"
     CDS             3968..5197
                     /locus_tag="VF061_00410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6667983.1"
                     /translation="MTSRPMLPRALVIGLLLTTAAACSSDRDDGGDPSGPVDPEPPPP
                     PPPPPRQLTLRVAGGGNNVPERFTSDLWIHGDHAYTGTWGSFQRDGNDGNALKIWSLE
                     ASGAPTLVDSLILPDVINVSDVEVSSDGQVLMFSTESFSEAGLYFYDLTDPTKPTLAD
                     SVHIAQGVHTATFGYIGDRRYAFAAQNAPEPALRIFDVTDPSAVTPAASVPIPPDYGV
                     HDSFVRGGIAFVFAWNSGVIIYDVGNGIRGGSPTTPVEVSRVVTDPGATGSPAVHNGW
                     WFHNPVTQEARYLFVGQEGPGTIGFEASGDIHVVDVSDLTDPREVASYRLPGAGTHNF
                     WMDEANQVLYAAYYNGGVVALDVSGTLSGDLGSRLLERIRPGGEDNTFTWGVMLAEGH
                     LYASDMLSGLWQIAVEP"
     gene            complement(5163..>6695)
                     /locus_tag="VF061_00415"
     CDS             complement(5163..>6695)
                     /locus_tag="VF061_00415"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HEX6667984.1"
                     /translation="LVNGTLMKVELARPLPPKARQVLEIAWSFPFGPNRNRMGIEEID
                     GGVTYEVAQWYPRLAVYDDVRGWNTEQYYGQGEFYLEYGSFDVSLTVPGDMIVAATGV
                     LRNPEDVLTATQRARLAQARTSATTVVIRGPDEVGDPASRPPTPYRTLTWRFTADSVR
                     DFAWAASRTFVWDAVGVNGGKTLAMSFYPPSAVPLWKEATEYAKFALESYSTQWAPYP
                     YPTASNVRGIEGGMEYPMIVFCNRPTPETLFSVTDHEFGHTWFPMVVGSNERRHAWMD
                     EGFNEFINYYNWVKRFGLPPEHRGSIRDYLAMATSGQERPVMSFADQLPSMFVGPAAY
                     DKPALALRLLREAVVGPERFDAAFKEYFRRWAYKHPTPADFFRTMEDGVGEDLSWFWR
                     GWLFGTAQLDQAVDSVVLADSAGVESRIYLRNAGGIPMPVELGLLMDDGSSQRLTLPV
                     EIWFGGATYTAIVPGPRKVNSVTLDPESRYPDVRRENDRWPAGIPQSETLTAPPRSAT
                     GR"
BASE COUNT         1034 a         2378 c         2292 g          991 t
ORIGIN      
        1 accgccatcg tcgtggcggg ctacctcggc atgatccgcg gtggatgaga gaggcacgcg
       61 catggcgctg aacgcccgga tcccctcggg gccgatccag gacaagtggg acaagcaccg
      121 cttcgagatg aagctggtca accccgcgaa caagcggaaa tacaccgtcc tggtcgtggg
      181 cagcgggctc gcgggcgcct ccgccgctgc gacgctcagc gagctgggct accaggtgaa
      241 gtgcttctgc ttccaggact ccccccggcg cgcccacagc attgcggccc agggcggcat
      301 caacgcggcc aagaattacc gcaacgacgg ggacagcatc ttccggctgt tctacgacac
      361 ggtgaagggc ggggacttcc gcgcgcggga ggggaacgtc tatcgcctgg cccagatcag
      421 cgtcaacatc atcgaccagt gcgtcgccca gggcgtgccg ttcgcccggg agtacggcgg
      481 gctcctggcc aaccgctcct tcggcggcgc ccaggtctcg cggacgttct acgcccgcgg
      541 ccagaccggg cagcagctcc tgctcggcgc ctaccagcag ctccagaagg aggtcgccct
      601 gggcggggtg aggatgttcc cccggaccga gatgctcgac ctggtggtgg tggacggccg
      661 ggcgcggggc atcgtggtgc gcgacatggt caccggccgc atcgagaccc acgtcggcga
      721 cgccgtggtg ctgggcaccg gcggctacgg gaacgtgttc tacctctcca ccaacgccaa
      781 gggctcgaac gtcacggcca tctggcgggc ccacaagcgc ggcgcgtact tcggcaatcc
      841 ctgttacacc cagatccatc ccacctgcat cccgcagagc ggcgactacc agtccaagct
      901 caccctgatg agcgagtcgc tccggaacga cggccgggtg tgggtgccgc tccgcgcggg
      961 cgacggccgc ccgccggacc aggtccccga ggcggagcgg gactactacc tggaacggcg
     1021 ttaccccagc ttcggcaatc tcgcgccccg tgacatcgcc tcccgcgccg cgaaggtggt
     1081 ctgcgacgaa ggccgcggcg tcgggcccgg tgggctcggc gtctatctcg atttcgcgga
     1141 cgccatccag cggctcggcg aggacgccat ccgggagcgc tacggcaacc tcttcgagat
     1201 gtaccagcgg atcaccgacg agaacccgta ccgggtcccg atgcggatct accccgcggt
     1261 gcactacacc atgggcgggc tctgggtgga ctacaacctg atgagcacga tcccgggtct
     1321 gcacgtgatc ggggaagcca acttctccga tcacggggcc aaccgcttgg gcgccagcgc
     1381 cctgatgcag ggcctggccg acggatactt catcctgccg agcaccatcg gcgactacct
     1441 cgcgaccgcc aagctggaga agatcgaccc gagccatccc gaatgccggc tggtgcagga
     1501 ggaggcggcg gtgctcaccc gccgcctgct ggaggtgaag ggcaggcgca cggtggactc
     1561 cttccaccgc gagctgggcc gggtgatgtg ggacaagtgc ggcatggccc ggaacgcggc
     1621 ggggctgcgc gaggcgctgg cccggattcc cgagctgcgc gaggagttct ggcgcgacgt
     1681 caacgtcccc ggcagcgacg tcgagctcaa ccaggccctg gagaaagccg ggcgggtcgc
     1741 cgacttcctg gagctggcgg agctgatgtg ccgcgacgcg ctccaccggg aggagtcctg
     1801 cggcggccac ttccgggagg agtaccagac cgaggacggc gaggcgctcc gggacgacga
     1861 gcgattcgcc tacgtggcgg cctgggagta cggcggccgc gacgccgagc cccggctgca
     1921 caaggagccg ctcgcgttcg agtacgtgca cctggcccag cggagctaca agtgaacctg
     1981 accctccacg tctggcggca gccctcggcg ggcgcggcgg gccgcatggt ccgctacgag
     2041 gcgcgcgaca tcagtcccga catgtcgttc ctcgagatgc tcgatgtcgt caacgagcac
     2101 ctcatggagc ggggcgaggc gccgatcgcc ttcgaccatg actgccgcga ggggatctgc
     2161 ggctcctgca gcctgatgat caacggggtg gcgcacgggc ccaaccgcgg caccgcgacc
     2221 tgccagctcc acatgcgcag cttccgggac ggcgacgaga tccgggtcga gccctggcgg
     2281 gctcgcgcct tcccggtggt gaaggatctg gtggtggacc ggagcgccct cgaccggatc
     2341 atcgccgcgg gcggctatat caccgcgccc acgggtggcg cccaggatgc caacacgatc
     2401 ctcatcccca agcggcacgt ggacaccgcg atggacgccg cacagtgcat cgcctgcggc
     2461 gcctgcgtgg cagcctgccc caacggctcc gcgtcgctct tcaccgccgc gaaggtcacc
     2521 cacctcggac tgctgcccca ggggcagccg gagcgcttcg accgggccgc gcggatggtg
     2581 cggcagatgg acctcgaagg cttcggctcc tgcacgctct acggcgagtg ccaggaggcg
     2641 tgccccaagg agatcagcat cgacaccatc acgcggatga atcgcgactt cctccgtgcc
     2701 agcctcaccg ccgggcgcgc ggccgtggcc gactcggact gacccgcctc tctttcgcga
     2761 cgctggggct cacgctgctg accgcggccg agtccctcca gagtcaggag ccggtgcggg
     2821 cccaggtcgc cgcccacgcg gtcgccgccc tgacccgggc ggatcccgtg cccggggggg
     2881 ccgcgctcac cgagctccgg ctggtccagc cggcgctcat gctgcggctc ggcggccctg
     2941 cgcgcctgag cctcaccgcg accctcgatc tcgtaggcgc caccatgagc gaaggcgagc
     3001 tcacccccgg cgcctatggc gagggcttcg tcgaccgccg ccatccccac acctacgtcc
     3061 acgagctgct gctcaccgcc gacgatctgc tgggccgagc cgacggcccc gcccgggtgt
     3121 cgctcacggc ggggaagggg ttcgcgccgt tcggcaccga cgatcccatg agccggccgg
     3181 tgctgcggta tcccgtgaac catcacctgg cgcaggtgct ggagcgcgcg gtcgcggtcg
     3241 ctgccgtcgc ccgcgggcgc ctggccctgg agctgggcct gttcaacggc gacgagccgg
     3301 agcgaccggg gcagtggccc agcgtgggcc ggttcgggga ttcctggagc gcgcggctca
     3361 cggggagacc tgcctgcgga cttgagctgc aggtctcgcg ggcgcacgtg cactcgccgg
     3421 agcatcgggc tggcgcgggc cccgaccagt cgaagtggag cttgtccgcc cgctatgacg
     3481 cgccggttcg ggggcagccg gtctatgcac tcgtcgaata cgctcgggcg tcggaggcgg
     3541 aaggcttctt cgtcttcgag accttgctcg ccgaaggtgc atggaccccc ggccggcatc
     3601 gtctcctcta tcgcctggag cggacggagc ggcccgagga gcagcgggta tctcgcttcc
     3661 gcaccctgcg cccacaccat gagaactcgg tcctgggcat cacccggtgg accgtgcaca
     3721 ccgcggggta cagcctctcc ctgccggcgc gggggggtct cactctcgct ccgctgctgg
     3781 aggtgtccgt cggccgtgtg gccgaggtcg gcgggggatt gttcgacgtc gagcaggtat
     3841 acggcaggga caccttctgg acctggacac tgggcgtccg cctgactttg ggcggcggcg
     3901 cccaccgcat gggtcgctat ggcgccgcca tggcacccaa cggcccccac cgacatccgg
     3961 accagccatg acttcgagac cgatgctccc ccgtgccctc gtgatcggtc tcctgctgac
     4021 gaccgccgcg gcatgctcct cggaccggga cgacggcggc gacccgagcg gccccgtcga
     4081 tccggaacca cccccgccgc ctccaccgcc gccccgccag ctgacgctgc gcgtcgcggg
     4141 cgggggcaac aacgtccccg agcgcttcac ctccgacctc tggatccatg gggaccacgc
     4201 ctacaccggc acctggggct cgttccagcg ggacgggaac gacggcaacg ccctcaagat
     4261 ctggtcgctg gaagcctcgg gcgctcctac cctggtcgac tccctcattc tgccggacgt
     4321 catcaacgtg agcgacgtgg aagtgagcag cgacggccag gtactcatgt tcagcaccga
     4381 gagcttcagc gaagccggtc tctacttcta cgacctgacc gacccgacca agccaacgct
     4441 ggcggacagc gtccacattg cccagggcgt gcacaccgcg acgttcgggt acatcgggga
     4501 ccgacgctac gcgttcgccg cccagaatgc tcccgagccg gcattgcgga tcttcgacgt
     4561 caccgatccg tccgccgtga cgcccgccgc cagcgtaccg attcctcccg actatggggt
     4621 ccacgacagc ttcgtgcggg ggggcatcgc cttcgtcttc gcctggaaca gcggcgtcat
     4681 catctacgac gtgggcaacg gcatccgggg aggctctccc accacgcccg tcgaggtgag
     4741 ccgagtggtc accgatccgg gggccaccgg ctcacccgcc gtccacaacg gctggtggtt
     4801 ccacaacccc gtgacccagg aggcgcggta tctcttcgtg ggccaggagg gccccggcac
     4861 gatcggcttc gaggcgagcg gcgacatcca cgtggtggac gtgtcggatc tcaccgatcc
     4921 gcgggaggtc gccagctacc ggcttcccgg agccggcacc cacaatttct ggatggacga
     4981 ggccaaccag gtcctctacg ccgcctacta caacggcggc gtggtcgcgc tggacgtctc
     5041 gggcacgctg agcggagatc tcggcagccg cctgctggag cgcatccggc ccggaggcga
     5101 ggacaacacc ttcacctggg gcgtgatgct ggccgagggg cacctgtacg ccagcgacat
     5161 gctcagcggc ctgtggcaga tcgcggtgga gccgtaagcg tctccgactg ggggatcccg
     5221 gccggccatc ggtcgttttc gcggcggacg tccggatacc tcgattcggg atccagcgtc
     5281 accgagttca ctttcctggg ccccggcacg atcgcggtgt aggtggcgcc gccgaaccag
     5341 atctccaccg gcagtgtgag ccgctggctg gatccgtcgt ccatcagcag acccagctcg
     5401 accggcatcg gaatcccgcc cgcgttccgc aagtagatcc gcgactccac ccccgccgag
     5461 tcggcgagca ccacggaatc caccgcctgg tccagctgcg cggtgccgaa gagccagccg
     5521 cgccagaacc agctcaggtc ttccccgacc ccgtcctcca tggtgcggaa gaagtcggcg
     5581 ggcgtcgggt gcttgtacgc ccaccgccgg aagtactcct tgaacgcggc gtcgaatcgc
     5641 tccggaccga ccacggcctc ccggagcagc cggagcgcca gcgcgggctt gtcgtaggcc
     5701 gcgggaccga cgaacatgga cggcagctgg tcggcgaagc tcatcaccgg ccgctcctgg
     5761 cccgacgtgg ccatcgcgag atagtcgcgg atgctgcccc ggtgctccgg cggcaggccg
     5821 aatcgcttga cccagttgta gtagttgatg aactcgttga acccctcgtc catccacgcg
     5881 tgccgccgct cgttggagcc caccaccatc gggaaccagg tgtggccgaa ctcgtggtcg
     5941 gtgacgctga agagggtttc cggtgtggga cggttgcaga acacgatcat cggatactcc
     6001 atcccgccct cgatgccccg gacgttgctc gccgtggggt agggataggg cgcccactgg
     6061 gtggagtagc tctcgagcgc gaacttcgcg tactccgtgg cctccttcca cagcggcacc
     6121 gccgagggcg ggtagaagct catggcgagc gtcttcccgc cgttcacgcc gaccgcgtcc
     6181 cagacgaacg tgcgggacgc agcccaggcg aagtcacgca cgctgtcggc ggtgaagcgc
     6241 caggtgagcg tgcgataggg cgtgggaggg cgggacgccg ggtcccccac ctcgtcgggc
     6301 ccccggatca cgaccgtggt ggcactggtg cgggcctggg ccaggcgggc gcgctgcgtc
     6361 gcggtgagca cgtcctccgg attgcggagg acgccggtgg cggccacgat catgtcgccg
     6421 gggacggtga ggctcacgtc gaagctgccg tactccaggt agaactcccc ctggccgtag
     6481 tactgctccg tgttccagcc gcggacatcg tcgtacaccg cgagtcgcgg gtaccactgc
     6541 gccacctcgt aggtcacccc accgtcgatc tcctcgatgc ccatccggtt gcggttgggg
     6601 ccgaagggga aggaccaggc gatctcgagg acctgccggg ctttcggcgg gagcgggcgg
     6661 gcgagctcca ccttcatcag ggtgccgttg accag
//
LOCUS       DASUYN010000020         2791 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1770722, whole genome shotgun sequence.
ACCESSION   DASUYN010000020 DASUYN010000000
VERSION     DASUYN010000020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2791)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2791)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2791
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1770722"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..655)
                     /locus_tag="VF061_00420"
     CDS             complement(<1..655)
                     /locus_tag="VF061_00420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX6667985.1"
                     /translation="MTATQTVPQDDVQQLERLVAAVKRLRAQVAQRIVGQEDVVDGIL
                     TAVLAGGHALLIGVPGLAKTLMVQTVAEALELSFNRVQFTPDLMPSDITGTEIIEEDL
                     TTGRRAFRFVHGPIFANMVLADEINRTPPKTQAALLQAMQEHQVTAGGTTYRLPDPFF
                     VLATQNPIEQEGTYPLPEAQLDRFMLELRVGYPSQAEEEAIVEQTTGAARAPLHAVLD
                     "
     gene            780..1010
                     /locus_tag="VF061_00425"
     CDS             780..1010
                     /locus_tag="VF061_00425"
                     /inference="COORDINATES: protein motif:HMM:NF021073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AtpZ/AtpI family protein"
                     /protein_id="HEX6667986.1"
                     /translation="MTTPDPGGRKSPGPMRYAGLGIQLAVSLVVFVLVGQWADRKLGT
                     GGLITVLAAFLGFGGTMYSLIRSLNRKDDGGR"
     gene            1007..1375
                     /locus_tag="VF061_00430"
     CDS             1007..1375
                     /locus_tag="VF061_00430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6667987.1"
                     /translation="MTLRGRYAAGVAVVGAAGLLALAAAPPGARAGIGWGLGVGLLLQ
                     APLGWWTLRAVGTERFLTVWGLGTLVRFGVVAVAAFALMPGPQWLAAPMLTTMVGTLV
                     ALLLVEGAVAMREHSREDER"
     gene            1372..2340
                     /gene="atpB"
                     /locus_tag="VF061_00435"
     CDS             1372..2340
                     /gene="atpB"
                     /locus_tag="VF061_00435"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF012347.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000276 - mitochondrial
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_component: GO:0045264 - plasma membrane
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HEX6667988.1"
                     /translation="MTRFGLSVTFALLLAALGPAAAVAQEEHARTVDVARDAVAPGSQ
                     EEATQNQIDIVHHIGNAHELELPFLGIVHLPQWEPIHFGGLSIDLSPTKHLVFMLLAA
                     LIVALTFILSARAVARAQAQGKPAKGFAGTMEALALYIRQEVVLPNVGHHGEGFVPYL
                     LTLFFFILVMNLLGLFPWGATPTGNIAVTAALALMAFITIEVAGMRALGLKGYLHTIF
                     YLPPGLPGPLKPIMLVIMTPVEIIGKLSKPFALAVRLFANMTAGHVLVLALIGLTFLF
                     QSYVVGGLASILATAIMLLELFVAFLQAFVFTLLTSVFIGLMRAEH"
     gene            2532..>2791
                     /gene="atpE"
                     /locus_tag="VF061_00440"
     CDS             2532..>2791
                     /gene="atpE"
                     /locus_tag="VF061_00440"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF012365.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000276 - mitochondrial
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_component: GO:0045264 - plasma membrane
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F0 subunit C"
                     /protein_id="HEX6667989.1"
                     /translation="MLYMLALLQAAAAVGPDKGYGLIGAGLAAGLAVLGAGIGIGRIG
                     GSATEGMARQPENTARIQTAMIIAAALIEGVALFVAVIAFLI"
BASE COUNT          371 a          949 c          990 g          481 t
ORIGIN      
        1 cgtcgagcac cgcgtgcagc ggggcccggg cggcgccggt ggtctgctcc acgatggctt
       61 cttcctccgc ctggctggga tagcccaccc tgagctccag catgaaccgg tcgagctggg
      121 cctcggggag cgggtaggtg ccctcctgct cgatcgggtt ctgggtggcg aggacgaaga
      181 acggatcggg caggcggtag gtcgttccgc cggcggtgac ctggtgctcc tgcatcgcct
      241 ggagcagtgc ggcctgggtc ttgggcggcg tgcgattgat ctcgtccgcg aggaccatgt
      301 tggcgaagat cggcccgtgg acgaaccgga acgcgcgccg accggtggtg aggtcctcct
      361 cgatgatctc cgtcccggtg atgtcgctgg gcatgaggtc gggcgtgaac tgcacccggt
      421 tgaagctcag ctccagcgcc tcggccacgg tctggaccat cagggtcttg gcgagccccg
      481 ggacgccgat gaggagggca tggccaccgg cgagcacggc cgttaggatg ccatctacga
      541 cgtcctcctg gccgacgatg cgctgcgcca cctgggcacg aagacgcttc actgcggcga
      601 cgaggcgctc gagctgctgc acatcgtcct gggggacggt ctgggtagcg gtcattggtt
      661 aagagattac ctgggtgtgg cccccctgtc accctgagcg acgcgggggg caggaaggaa
      721 gagtgatttc cctgtcccgt tcgcttgcga aatttttcac aagccggtag gtttgccccg
      781 tgacaacccc tgatccgggc ggccggaagt cccccgggcc gatgcggtac gccgggctcg
      841 gcatccagct cgccgtcagc ctcgtggtct tcgtgctcgt cggccagtgg gccgaccgca
      901 agctcggtac cggagggctg atcaccgtcc tggcggcgtt cctgggcttc ggcggtacca
      961 tgtactcgct gatccggagc ctgaaccgca aggacgacgg aggccggtga ccctccgggg
     1021 ccgctacgcc gccggcgtgg cggtggtggg cgccgcagga ctgctcgcct tggcggcggc
     1081 acctcccggc gcacgcgcgg ggatcgggtg ggggctcggg gtgggtctcc tgcttcaggc
     1141 gccgctgggc tggtggaccc tacgggcggt cggaaccgaa aggttcctga ccgtgtgggg
     1201 cctcggcacc ctggtgcggt tcggggtggt ggcggtcgcc gccttcgctc tgatgcccgg
     1261 gccccagtgg ctggccgccc cgatgctgac gacgatggta ggcaccctgg tcgccctcct
     1321 gctggtggag ggcgccgtgg cgatgcggga acactcgcgg gaagacgagc gatgacgcga
     1381 ttcggactgt cggtgacgtt cgccctgcta ctggcggccc tcgggccggc cgcggcagtc
     1441 gcccaggagg agcacgctcg cacggtggat gtcgcgcgcg acgcggtggc gcccgggagt
     1501 caggaggaag ccacccagaa ccagatcgac atcgtccacc acatcgggaa cgcgcacgag
     1561 ctcgagcttc ccttcctcgg catcgtccac ctgccccaat gggagccgat ccacttcggc
     1621 gggctctcga tcgacctctc ccccaccaag cacctcgtct tcatgctgct ggccgcgctc
     1681 atcgtggcgc tgactttcat cctgagcgcc cgggcggtcg cccgcgcgca ggcgcagggg
     1741 aagccggcca agggcttcgc ggggacgatg gaggcgctgg cgctctacat ccggcaggaa
     1801 gtggtcctcc ccaatgtcgg gcatcacggc gaggggttcg tcccctacct gctgacgctc
     1861 ttcttcttca tcctggtgat gaacctcctg gggctcttcc cctggggcgc gaccccgacc
     1921 ggcaacatcg ccgtcaccgc cgcgctcgcg ctcatggcgt tcatcacgat cgaagtggcg
     1981 gggatgcggg ccctgggcct caagggatac ctgcacacga tcttctacct gccgcccggc
     2041 ctgcccggcc ccctcaagcc gatcatgctg gtgatcatga cgccggtgga gatcatcggg
     2101 aagctgtcga agcccttcgc cctggccgtg cggctcttcg ccaacatgac ggcgggccac
     2161 gtgctggtgc tggcgctgat cggcctcacg ttcctgttcc agagctacgt cgtcggtggg
     2221 ttggcctcga ttctggcgac cgcgatcatg ctgctggagc tgttcgtcgc cttcctccag
     2281 gccttcgtgt tcacgctgct caccagcgtg ttcatcgggc tgatgagggc ggagcactag
     2341 ttctttcccg acgccgcgcg cgcccgcgcg agcgtcgtcc gtagtccgcc gaacggcgga
     2401 cgaagcccgc tgctccccgg ccccggccgg gagcgccggc gggtcaccgt ggcggagccg
     2461 cccagggaga ggcggctcgc gtgcggcggg cgcgaccggc accggttctc ccgcccagac
     2521 atggagtgga catgctgtac atgctcgccc tgcttcaggc cgccgcggcg gtcggaccgg
     2581 acaagggata cggtctcatc ggcgccggcc tcgcggccgg cctcgcggtc ctcggcgccg
     2641 gcatcggcat cggccggatc ggcggttcgg ccaccgaggg aatggcgcgc cagccggaga
     2701 acaccgcgcg catccagacg gccatgatca tcgcggccgc gctcatcgag ggcgtcgcgc
     2761 tgttcgtcgc cgtcatcgcg ttcctgatcc a
//
LOCUS       DASUYN010000021         2470 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1109856, whole genome shotgun sequence.
ACCESSION   DASUYN010000021 DASUYN010000000
VERSION     DASUYN010000021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2470)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2470)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2470
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1109856"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..453)
                     /locus_tag="VF061_00445"
     CDS             complement(<1..453)
                     /locus_tag="VF061_00445"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX6667990.1"
                     /translation="MSEAPIRVLVVDDHAIVRTGIRHVLESEPGFEVVAEASTGAEAL
                     ELAASLHPDVAVLDISMPGEPGLRVAAELRQRSPDTQVLILSMHDNTEYVVESLRAGV
                     HGYLLKDTAATELRGAIRAVRRGESFFSPVIAGRLSAVFRGDPPGSASS"
     gene            complement(450..2210)
                     /locus_tag="VF061_00450"
     CDS             complement(450..2210)
                     /locus_tag="VF061_00450"
                     /inference="COORDINATES: protein motif:HMM:NF024883.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing sensor histidine kinase"
                     /protein_id="HEX6667991.1"
                     /translation="MQDPIPAATTELHAAFLQAIITLGLAALCWFIHRRYRKPYFAWW
                     AGAWGLYGVRIGAIVSFLLTGNWIWLYWHQVVTGWTALALLYAALVFSRGLRWRPRYF
                     ALVLFPPVWSYIAIYRLDHFLWAAGPAVLFLSLATLWTGLVFFRYRQRVGSSGATLLA
                     AAFILWGLHHLDYPFLRARGAWNPWGYYIDIVLTLAVGTGILLLVLDDLRRGLGALSD
                     LSGDLQQAGRQQDVLDALLARPLTLPAVRGSALFLADDGRPRFTRGAGVYGGGVDVAP
                     DGPAADLLARAIATGLPQVTDEWKDRAAGAYPYAAVLPLLRNQATVGALVLVGDARDP
                     FTALDDRFLVALGQQVGAALENTDLYRRLEARTVELARLSARMVAQHEEERRRLSREL
                     HDETAQVFSAVRIELGVLRDGLPPAQSTRLGQVLGLIDKGIRSIRSVTNDLRPSLLDD
                     LGLLPALRSLVAEFGERSGMRVELEVPASLPPLSGEAELALFRALQEALSNVLRHAQA
                     RSVDIGISVSREGVLLEVRDDGRGPNGAGPEELERGGHMGLAGMRERIGALGGTVRFG
                     GAPGAGALLEVLVPAEASRS"
     gene            complement(2282..>2470)
                     /locus_tag="VF061_00455"
     CDS             complement(2282..>2470)
                     /locus_tag="VF061_00455"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEX6667992.1"
                     /translation="VVKSLEAGIVWVNHMQPTFVEAPWGGYKMSGFGRELGHWGVEEY
                     LETKQVFINLDEKPIGWY"
BASE COUNT          397 a          897 c          873 g          303 t
ORIGIN      
        1 gctggacgcg gatcccgggg ggtcgcctcg gaagaccgcg ctcagcctgc ccgcgatcac
       61 cgggctgaag aaggattccc cgcgccggac cgcgcgaatg gcgccccgaa gctccgtcgc
      121 cgcggtgtcc ttgaggagat aaccgtgcac gcccgcccgg agactctcca ccacgtactc
      181 ggtgttgtcg tgcatgctga gaatgagcac ctgggtatcg ggcgagcgct gccgcagctc
      241 ggccgccacc cgcagcccgg gctcgcccgg catggagatg tcgaggaccg cgacgtcggg
      301 gtgcaggctc gccgccagct ccagcgcctc ggcgccggtg gatgcctccg ccacgacctc
      361 gaagccgggc tcgctctcca gcacgtgccg gattccggtc cgcacgatgg cgtggtcgtc
      421 caccacgagc acccggatcg gtgcctcgct cacgagcggg acgcctcggc cggcaccagc
      481 acctccagca gcgcgcccgc gccgggtgcg ccaccgaagc gcacggtgcc gcccagcgcc
      541 ccgatgcgct cccgcatccc cgcgagaccc atgtggcctc cgcgctccag ctcctcgggg
      601 ccggcgccgt tggggccccg gccgtcgtcc ctgacctcga gcaggacccc ctcccggctc
      661 accgagatcc cgatgtcgac cgaccgggcc tgcgcgtggc gcaacacgtt cgacagcgcc
      721 tcctgcagcg cgcggaagag cgcgagctcc gcctcgccgg agagcggcgg aagcgaggcc
      781 ggcacctcca gctccacccg catgccgctc cgctcgccga actccgccac cagcgagcgg
      841 agcgcgggca ggaggccgag gtcgtccagg agcgagggac ggagatcgtt ggtgacgctc
      901 cggatgctgc ggatgccctt gtcgatgagt ccgagcacct ggccgagcct cgtgctctgc
      961 gccggcggca ggccgtcgcg cagcacgccc agctcgatcc gcaccgcgga gaacacctgc
     1021 gcggtctcgt cgtgcagctc gcgcgagagc cggcgccgct cctcctcgtg ctgcgcgacc
     1081 atcctcgccg agagccgggc cagctcgacg gtgcgagcct ccagccggcg atagagatcg
     1141 gtgttctcca gcgcggcgcc gacctgctgg cccagggcga cgagaaaacg gtcgtcgagg
     1201 gcagtgaagg ggtcccgggc gtcccccacc agcacgaggg cgcccaccgt ggcctggttg
     1261 cggagcaggg gcagcacggc ggcgtagggg taggcgcccg ccgcgcggtc cttccattcg
     1321 tcggtgacct gggggaggcc ggtcgcgatc gcgcgcgcaa ggaggtccgc ggccgggccg
     1381 tccggcgcca cgtccacgcc gccgccgtag acgcctgccc cccgggtgaa gcgcggtcgg
     1441 ccgtcgtcgg ccaggaacag cgcgctgccg cggaccgccg ggagggtgag cggccgggcg
     1501 aggagtgcgt cgagcacatc ctgctgccga cccgcctgct gcaggtcccc cgagaggtcg
     1561 ctcagcgcgc ccagtccgcg gcggaggtcg tccagcacca gcagcaggat gccggtgccc
     1621 acggccagcg tgaggacgat gtcgatgtag tagccccacg ggttccaggc accgcgcgcg
     1681 cgcaggaagg ggtagtcgag gtggtgaagg ccccagagga tgaacgccgc ggccaggagc
     1741 gtggcgccgc tggaccccac ccgctgccga tagcggaaga agaccaggcc ggtccacagg
     1801 gtcgcgaggc tgaggaagag gaccgcgggt ccggccgccc agaggaagtg gtcgagccgg
     1861 taaatggcga tgtacgacca gaccggcggg aagagcacca gcgcgaaata ccggggccgc
     1921 cagcggagcc cgcgggagaa caccagcgcc gcatagagca gcgcgagcgc ggtccaaccg
     1981 gtgacgacct ggtgccagta gagccagatc cagttcccgg tgaggaggaa gctgacgatc
     2041 gcgccgatcc gcacgccgta gagcccccac gcccccgccc accaggcgaa gtacggcttg
     2101 cggtagcgcc ggtggatgaa ccagcacagg gccgcgaggc ccagggtgat gatggcctgg
     2161 aggaaggcgg cgtgcagctc ggtggtcgca gcggggatgg gatcctgcat ggcgctaaga
     2221 atatccgggc gggcgggcga gaagagaagc gtgaaaggtg aagcctctca cgccttcatc
     2281 gtcagtacca cccgatcggc ttctcgtcca ggttgatgaa cacctgcttc gtctccaggt
     2341 actcctccac cccccagtgc cccagctccc ggccgaaccc actcatcttg tagccgcccc
     2401 agggagcctc gacgaacgtc ggctgcatgt gattcaccca cacgatcccc gcctccaacg
     2461 atttgaccac
//
LOCUS       DASUYN010000022         2833 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1110018, whole genome shotgun sequence.
ACCESSION   DASUYN010000022 DASUYN010000000
VERSION     DASUYN010000022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2833)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2833)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2833
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1110018"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1140
                     /gene="lysS"
                     /locus_tag="VF061_00460"
     CDS             <1..1140
                     /gene="lysS"
                     /locus_tag="VF061_00460"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004824 - lysine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006430 - lysyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HEX6667993.1"
                     /translation="VTVRAESVTLLAKSLRPLPRGKTQQTDDGAITYGGLQDPELRYR
                     QRYADLAVHADVREVFRLRAKAITWIRRFLDERDFLEVETPILQPLYGGAAARPFVTH
                     HNALDMPLYLRIADELYLKRLLVGGLERVYEIGHDFRNEGMDRTHNPEFTMLEVYQAY
                     ADYTDMMALTEALVAGVIEHCLGTRVLERGGVTLDFTPPFRRVSFIEGVRERCGLDLR
                     TASSDEMRRVLVQAGEPADVVGGGKLQDEVFKVVLEPQLVKPTFVLDYPKPLSPLAKE
                     HRNDPALTERFELFVLGRELANAFSELNDPDDQRRRFEEQVRQRAAGNEEAHAFDADY
                     IRALEYGMPPAGGMGLGIDRLVMVLADLPSIRDVILFPALRPEDG"
     gene            1137..2438
                     /locus_tag="VF061_00465"
     CDS             1137..2438
                     /locus_tag="VF061_00465"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX6667994.1"
                     /translation="MSRLRATLRELARTFRMPSKLEWRLARRYLRSRRGARTASLNTV
                     ISTGGVAVGVTALIVVLGVMNGLRNDLRERILVANPHLRVLTYGAGLRMDDWRATLRT
                     IRQQPGVVAAAPEVISQAGITAGADYGEGVNLVGFDPDTGRMSVTSLPRSIEKGDLSF
                     RTTKPGVDGGVLLGTRLAGRLSVYPGDVVTLVPVTQAKMNPALGLAVPRFWKFEVTGL
                     FDTGMFKYDNQFVVLSLEKAQEFTGLGMAVSGIAVRVEDPDLAPVIGEALEKRLGYPH
                     RALDWQTQNASLFSALQLEKLAMGLIIFFIMVVAAFNIVGTLTMVVTDKTKEIGILRA
                     MGLTSPAVGRVFLIQGAVIGVVGTLTGLLCGLAVAYVVDKSGWIRINPAVYFIDHLPV
                     DVEPFDVLVVVGASIAIAVLATVYPSRTAAGLTPVEAIRHE"
     gene            2435..>2833
                     /locus_tag="VF061_00470"
     CDS             2435..>2833
                     /locus_tag="VF061_00470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX6667995.1"
                     /translation="MSAILQATGLRKVYQGGDGLPIDVLSGVDLAVSRGEFVAIVGSS
                     GSGKSTLLHLLGALDTPSAGTVQLDGREYGDLDPDALAMVRNRKIGFVFQFHHLLREF
                     TALENVMLPVLLNGTSVADAAGRARALLEAV"
BASE COUNT          412 a          956 c         1003 g          462 t
ORIGIN      
        1 gtcaccgtcc gggccgaatc cgtcaccctg ctggccaagt cgctccgccc gctgccccgg
       61 ggaaagaccc agcagacgga cgacggtgcg atcacctacg gcggcctcca ggatcccgag
      121 cttcgctatc ggcagcgcta cgcggacctc gcggtccacg ccgacgtgcg cgaggtgttc
      181 cgcctccgcg ccaaggcgat cacctggatc cgccgcttcc tcgacgagcg ggatttcctc
      241 gaggtggaga cccccatcct ccagccgctc tacgggggcg cggccgcccg gccgttcgtc
      301 acccatcaca acgcgctgga catgccgctc taccttcgca tcgcggacga gctgtacctc
      361 aagcggctgc tggtgggcgg tctggagcgc gtctacgaga tcggccacga tttccggaac
      421 gaggggatgg accggaccca caaccccgaa ttcaccatgc tggaggtgta ccaggcgtac
      481 gccgattaca ccgacatgat ggcgctcacc gaagccctgg tcgcaggggt gatcgagcac
      541 tgcctcggca cccgggtcct ggagcggggc ggagtcacgc tcgacttcac cccgccgttc
      601 cggcgcgtga gcttcatcga gggcgtccgc gagcgctgcg ggctcgacct gcggacggcc
      661 tcctcggacg agatgcgtcg ggtgctggtc caggccggcg agccggccga cgtggtcggc
      721 ggcggcaagc tgcaggacga ggtattcaag gtggtgctgg agccgcaact ggtgaagccg
      781 acgttcgtgc tcgactaccc gaagccgctc tccccgctcg ccaaggagca ccggaacgat
      841 ccggccctga ccgagcggtt cgagctcttc gtgctggggc gcgagctggc caacgccttc
      901 agcgagctca acgatcccga cgaccagcgg cgccggttcg aggagcaggt gcggcagcgg
      961 gcggccggca acgaggaggc ccacgccttc gacgccgact acatccgcgc cctggagtac
     1021 ggcatgccgc cggccggcgg gatgggcctg ggcatcgacc ggctggtgat ggtgctcgcc
     1081 gacctgccct ctatccgcga cgtgatcctg tttcccgccc tgcggccgga ggacggatga
     1141 gtcgcctccg ggccaccctg cgcgagctgg cgcgcacgtt ccgcatgccg tcgaagctgg
     1201 aatggcgcct cgcccggcgg tacctccgga gccggcgggg tgcccgcacc gcgtcgctca
     1261 acaccgtcat ctccaccggc ggggtcgccg tgggggtcac cgccctcatc gtggtgctcg
     1321 gcgtgatgaa cgggctgcgg aacgacctcc gtgagcgcat cctggtcgcg aacccgcacc
     1381 tccgcgttct cacctacggg gcggggctcc ggatggacga ctggcgcgcg acgctccgga
     1441 cgattcggca acagccgggc gtcgtggcgg cggcgccgga ggtgatcagc caggcgggca
     1501 tcaccgccgg cgcggactac ggtgagggcg tcaacctggt gggtttcgat cccgacaccg
     1561 ggcgcatgtc ggtcacctcg ctgccgcgct cgatcgagaa gggcgacctc tccttccgca
     1621 ccaccaagcc gggggtggac ggcggggtgc tgttgggcac ccgcctggcc ggacgcctct
     1681 cggtgtatcc cggtgacgtc gtgaccctgg tgcccgtcac ccaggccaag atgaaccccg
     1741 cgctgggcct ggccgtcccc cggttctgga agttcgaggt gacgggcctc ttcgacaccg
     1801 gaatgttcaa gtacgacaat cagttcgtcg tgctgtcgct ggagaaggcc caggagttca
     1861 ccggcctggg gatggcggtc tcgggcatcg cggtgcgggt ggaggatccc gacctcgcgc
     1921 ccgtcatcgg cgaggcgctg gagaagcggc tcggctaccc ccaccgggcg ctcgactggc
     1981 agacccagaa cgcgagcctc ttcagcgcct tgcagctcga aaagctggcc atgggactga
     2041 ttattttctt catcatggtg gtggccgcct tcaacatcgt ggggaccctc accatggtgg
     2101 tgaccgacaa gacgaaggag atcgggatcc tgcgtgccat ggggctcacc tcgcccgcgg
     2161 tcgggcgggt gttcctgatt cagggcgcgg tgatcggggt cgtcgggacg ctgacggggc
     2221 tgctctgtgg actcgccgtc gcgtacgtgg tggacaagtc ggggtggatt cggatcaatc
     2281 cggcggtcta cttcatcgat cacctgccgg tggacgtcga gccgttcgac gtgctggtgg
     2341 tggtgggggc gagcatcgcg atcgcggtgc tggccaccgt ctatccttcg cggacggccg
     2401 cgggactcac gcccgtcgag gcgatccgcc acgaatgagc gccatcctcc aggctaccgg
     2461 gctgcggaag gtctaccagg gcggcgacgg gctcccgatc gatgtgctgt ccggggtgga
     2521 tctggcggtg agccggggtg agttcgtggc gatcgtcggc tccagcggct cgggcaagag
     2581 cacgctgctg cacctgctgg gtgcgctcga caccccgtcg gccggcaccg tgcagctcga
     2641 cggccgggag tacggtgacc tcgatcctga cgccctggcc atggtgcgga accggaagat
     2701 cggattcgtg ttccagttcc atcacctgct gcgcgagttc acggcgctgg agaacgtgat
     2761 gctgccggtg ctgctgaacg gcacgtcggt cgccgatgcg gccggccgtg cgcgcgcgct
     2821 gctggaagcg gtg
//
LOCUS       DASUYN010000023         2992 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1550713, whole genome shotgun sequence.
ACCESSION   DASUYN010000023 DASUYN010000000
VERSION     DASUYN010000023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2992)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2992)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2992
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1550713"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..739
                     /locus_tag="VF061_00475"
     CDS             <1..739
                     /locus_tag="VF061_00475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6667996.1"
                     /translation="ATLQLLRRESPEPDALPHTPEGVQGLLDDQVQAAAASLDAYEIT
                     GDRAWLAWSEGIMERVWRDYWDEGSGGLFDTARGRNSEEGLLPAKVKPVQDTPTPSPN
                     GVAGITLVRLHELTADARWRERAGALVAAFAGGALELGLHGAAFLLAMDWYLQPSTHL
                     VVIGEEGDGIADELHRAALAGFAPRRAVQRLTPAEVEGGRLPPAIAGMLAAGSGPRGY
                     ACVGTNCSLPATTPEEWAQLLAGNARV"
     gene            814..1263
                     /locus_tag="VF061_00480"
     CDS             814..1263
                     /locus_tag="VF061_00480"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEX6667997.1"
                     /translation="MAKTATIDTSKGTIVADLFETEVPGTVANFEKLANSEFYDGTRF
                     HRVIRNFMIQGGDPLSREANNPRVGTGGPGYKIKCETHLNTHKHVAGTLSMAHAGKDT
                     GGSQFFICHSPQPHLDRVHTVFGQVREGMNVVNGIQQNDVINSIRVS"
     gene            1283..1660
                     /locus_tag="VF061_00485"
     CDS             1283..1660
                     /locus_tag="VF061_00485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6667998.1"
                     /translation="MTADYALIDQQGKLSVLGIFQHVWLTKFPAVCPRTHLVLRVRGR
                     RTEIGVHTIRIRFVDDAGAELLGGEGTVQFGEPPAGVTDVEAGAVLVFDIPLPRPGQY
                     AFEITLDGELASRVPLTAAVVGA"
     gene            1683..2264
                     /locus_tag="VF061_00490"
     CDS             1683..2264
                     /locus_tag="VF061_00490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEX6667999.1"
                     /translation="MSLTRPEALALMHEYTASDALRKHMYAVEIAMRAMAEREGEDPE
                     AWGMVGLLHDFDYERFPNAAHSAHEGHPSEGVRLLAERGLPEPMQRAILGHAGYTGVP
                     RDAPMARALFAVDELCGFLVACALVRPSRSLQDLEVSSVRKKLKDKAFARGVSREDVI
                     QGAAELGVPLDELIAFVLAALRPHERVLGLGPA"
     gene            2261..2560
                     /locus_tag="VF061_00495"
     CDS             2261..2560
                     /locus_tag="VF061_00495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668000.1"
                     /translation="MTGVAADGPTQSVACAINRAAGGRPIPGNRLELLIDGPDTYAAM
                     LELIAGASRWVHFENYIIRSDAEGWRFAEALAAKAREGLRVRVLYDAVGSMLTER"
     gene            2621..>2992
                     /locus_tag="VF061_00500"
     CDS             2621..>2992
                     /locus_tag="VF061_00500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668001.1"
                     /translation="MHIVTNFARDHRKLVVADGAAAVIGGLCIGSEWTGDGDAIRPWR
                     DTAVRVGGPAAAVLDQAFARTWAVAGRPLPEEEQAGRVTPEGDGEVRVIAGEPGRERA
                     FRVIELLAAGSMERLWITDAYM"
BASE COUNT          440 a         1052 c         1079 g          421 t
ORIGIN      
        1 ggccacgctg cagctgctgc ggcgggagag ccccgagccc gacgccctgc cgcacacccc
       61 ggaaggggtc caggggctgc tcgacgacca ggtccaggcc gcggccgcgt cgctcgacgc
      121 ctacgagatc accggcgacc gcgcctggct cgcctggtcc gaggggatca tggagcgggt
      181 gtggcgggac tactgggacg agggctcggg cgggctcttc gacaccgcgc ggggacggaa
      241 cagcgaggaa gggctgctgc ccgcgaaggt gaagccggtg caggacacgc ccacgccttc
      301 acccaatgga gtcgcgggga tcacgctggt gcggctccac gaactgacgg cggacgcccg
      361 ctggcgtgaa cgggcgggcg ccctggtcgc cgcgttcgcc ggcggcgcgc tcgagctcgg
      421 gctccacggc gcggcctttc tcctggcaat ggattggtac ctgcaaccga gcacccatct
      481 cgtggtgatc ggggaggaag gggacgggat cgcggacgag ctccaccggg cggcgctggc
      541 ggggttcgcc ccccggcggg cggtccagcg tttgacgccc gccgaagtgg agggcggtcg
      601 gctgccgccc gcgatcgcgg gcatgctcgc ggcgggcagc ggaccgcgcg gatacgcgtg
      661 cgtggggacg aactgcagcc tcccggcgac gacgcccgaa gagtgggcgc agctgctcgc
      721 cggaaacgcg cgcgtgtgat cagtgcccgt tctctactcc ccaccccatt accttatact
      781 accgacggca cccattccca ggagtagatc cgcgtggcca agaccgcgac catcgacacc
      841 agcaagggca ccatcgtggc cgacctcttc gagaccgagg tccccggcac ggtagccaac
      901 ttcgagaagc tcgcgaacag tgagttctat gacggcaccc gcttccaccg ggtgatccgg
      961 aatttcatga tccagggcgg cgaccccctc tcccgcgagg ccaacaaccc gcgggtgggc
     1021 accggcggcc ccggctacaa gatcaagtgc gagacccatc tcaacaccca caagcatgtc
     1081 gccggcacgc tctccatggc gcacgccggc aaggacaccg gcggcagcca gttcttcatc
     1141 tgccactcgc ctcagccgca cctcgaccgg gtgcacacgg tcttcggcca ggtccgggag
     1201 ggaatgaacg tcgtcaacgg catccagcag aacgacgtga tcaactccat ccgggtgtcc
     1261 tgacctgcac ctcgatttcg cgttgaccgc cgattacgcc ctgatcgacc agcagggcaa
     1321 gctcagcgtg ctcggcatct ttcagcacgt ctggctgacc aagttcccgg cggtctgccc
     1381 ccgcacccac ctcgtgctcc gggtgcgggg gcggcggacc gagatcggcg tgcacaccat
     1441 ccgcatccgc ttcgtggacg acgccggcgc cgagctgctc ggcggcgagg gcaccgtcca
     1501 gttcggcgag ccgccggccg gagtgaccga cgtggaagcc ggcgccgtgc tggtgttcga
     1561 cattccgctg ccccgaccgg gccagtacgc cttcgagatc accctggacg gcgagcttgc
     1621 gagccgggtg ccgctgacgg cggccgtggt cggcgcgtag ctccgacgcc tctgccaccg
     1681 ccatgtccct gacccgcccc gaagctctcg cgctgatgca cgagtacacc gcgtcggacg
     1741 ccctccggaa gcacatgtac gccgtagaga tcgccatgcg ggccatggcg gagcgggagg
     1801 gcgaggaccc cgaggcgtgg ggcatggtcg gcctgctgca cgacttcgac tacgagcgct
     1861 tccccaacgc cgcgcactcg gcccacgagg gacatccctc ggagggcgtg cgcctcctcg
     1921 cggagcgcgg gctgcccgag ccgatgcagc gggccatcct ggggcacgcc ggctacaccg
     1981 gcgtgccccg cgacgcgccc atggcgaggg ccctcttcgc ggtggacgag ctctgcggct
     2041 tcctggtggc gtgcgcgctg gtgcggccgt cgcggagcct ccaggacctc gaggtctcgt
     2101 cggtccggaa gaagctgaaa gacaaggcat tcgcccgcgg ggtgagtcgg gaggacgtga
     2161 tccagggggc cgccgagctg ggcgtgccgc tggacgagct catcgcgttc gtgctcgccg
     2221 cgctccgacc acacgagcgg gtcctcgggc tcggcccggc gtgaccgggg tcgcggccga
     2281 cggccccacg cagtcggtcg cctgcgcgat caaccgcgcg gccggcgggc ggccgatccc
     2341 cgggaaccgg ctcgagctgc tgatcgacgg cccggatacc tacgccgcga tgctcgagct
     2401 catcgccggc gcctcccgct gggttcactt cgagaactac atcatccgga gcgatgccga
     2461 gggctggcgc ttcgccgaag cgctggcggc gaaggcgcgc gagggactgc gggtgcgcgt
     2521 gctgtacgac gcggtcggct cgatgctgac cgagcgatag ttctggcgct tcctgctcca
     2581 ggccggtgtc gagttccgcg cctttcaccc gctgaggccg ttgcacatcg tcaccaactt
     2641 cgcccgcgac caccgcaagc tggtggtggc cgacggcgcg gcggccgtca tcggtgggct
     2701 ctgcatcggc tccgagtgga ccggcgacgg cgatgcgatc aggccctggc gggacaccgc
     2761 ggtccgggtc ggtggtccgg cggcggccgt gctcgaccag gcgttcgccc gcacctgggc
     2821 ggtggcgggg cgaccgctgc cggaggagga gcaggcgggc cgggtcaccc cggaaggcga
     2881 cggtgaggtc cgggtgatcg cgggtgagcc cgggcgggag cgggcgtttc gggtgatcga
     2941 gctgctggct gccgggagca tggagcggct ctggatcacc gacgcctaca tg
//
LOCUS       DASUYN010000024         2766 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_7812, whole genome shotgun sequence.
ACCESSION   DASUYN010000024 DASUYN010000000
VERSION     DASUYN010000024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2766)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2766)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2766
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7812"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            152..1354
                     /locus_tag="VF061_00505"
     CDS             152..1354
                     /locus_tag="VF061_00505"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HEX6668002.1"
                     /translation="MESTYFRRGFGLKAEIEGQLAADYHSAVVEALRANQYRLTVGPL
                     TFRLAREFGFCYGVDRAVDYAYETRVKFPRRRLYLVGEIIHNPHVNQKLRDMGVSFLE
                     RSEAGEFDFSAITPEDAVILPAFGVTIGDFERLRAIGCVLVDTTCGSVLNVWKRVESY
                     ARDGFTAIIHGKHWHEETKATASQVMKYPEGRYLVVFDMEEARLVCDFIEQGGDAAPL
                     RERFARQTSPGFDFERDLVRVGIANQTTMLSGESLAIAEEVRRSMIRRYGAAAGEHFR
                     SFDTICSATQERQDAVVALLEEPLDVMVVVGGYNSSNTCHLAELVHSRGVPVFHIEDA
                     DAVDPEAGTVRHQPIGSKREETTPGWLDGARVVGLTAGASTPNNKIGETVARICRTAG
                     QDLGAVVG"
     gene            1359..2333
                     /locus_tag="VF061_00510"
     CDS             1359..2333
                     /locus_tag="VF061_00510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668003.1"
                     /translation="MSPFRQATVSGLPAIVLRGEELEVVAVPAVGMKLTNLRRPRGRE
                     WLWRNDQMPLAPPRPDASFVETADSGGWDECFPTVSPSPVPGAPAGMPALPDHGELWS
                     AAWTSSVYEHAGGVTLAGSAAGRVLPYEFHRELTLDPREPVIRLRYRVRNTGATPFPW
                     IWCAHPLLNVQPGTTLELPTMHQARLDAVHGIEAAARGDIVSWPAAFGGEGGRFRFPA
                     EGAWAVKLFGDVGASGRAVLTDPRKGERLEIRVSPEEVPQVGIWINNRGWAPEGRRPY
                     CNLGLEPAIGAPDSLEEAVRDWKTARTLEAGEEQGWALEVRLLEEGED"
     gene            complement(2330..>2766)
                     /locus_tag="VF061_00515"
     CDS             complement(2330..>2766)
                     /locus_tag="VF061_00515"
                     /inference="COORDINATES: protein motif:HMM:NF028226.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cation transporter dimerization
                     domain-containing protein"
                     /protein_id="HEX6668004.1"
                     /translation="VGAAVATGWHRLDAIVAIAVALNVLRSGFGLVDRSMHGLLDTSL
                     PEETLGEIKGILDTHTGAGVRYHALRTRQAGARRFISFHILVPGSWTVQRGHDLLERI
                     EQRIREAVPNSVVDTHLEPIEDPVSWEDTRLERPSEGDRAPT"
BASE COUNT          399 a          978 c          997 g          392 t
ORIGIN      
        1 gagggcagcc gcctcacggt caccgggacc ttccagggcc tgactgtcag gcccgcgccc
       61 tccgactgcg ccggggtcgc cccggacccc gacgataccg accccgatct cgccgaggag
      121 ttcgaggaga cggcggatta gattcccgcc catggagagc acttacttcc gtcgcggttt
      181 cgggctcaag gccgagatcg agggccagct cgccgccgac taccacagcg cggtggtgga
      241 ggcgctgcgg gccaatcagt accgcctgac cgtcggcccg ctgaccttcc gcctcgcccg
      301 cgagttcggc ttctgctacg gcgtggaccg ggccgtggac tacgcctacg agacccgggt
      361 caagttcccc cggcgccgcc tgtacctggt cggcgagatc atccacaatc cccacgtcaa
      421 ccagaagctg cgggacatgg gggtcagctt cctcgagcgg agcgaggcgg gcgagttcga
      481 cttctcggcg atcacgccgg aggacgcggt catcctgccg gcgttcggcg tcaccatcgg
      541 cgacttcgag cggcttcgcg cgatcggctg cgtgctggtg gacaccacct gcggctcggt
      601 gctcaacgtc tggaagcggg tggagagcta cgcgcgcgac ggcttcaccg cgatcatcca
      661 cggcaagcac tggcacgagg agaccaaggc gaccgcgagc caggtcatga agtatcccga
      721 ggggcgctac ctcgtggtgt tcgacatgga ggaggcccgg ctggtctgcg acttcatcga
      781 gcagggcgga gacgccgccc cgctccgcga gcgcttcgcc aggcagacct cgccggggtt
      841 cgacttcgag cgggatctgg tgcgggtcgg gatcgccaac cagaccacga tgctctccgg
      901 cgagtcgttg gccatcgcgg aggaggtgcg gcgcagcatg atccgtcgct acggtgcagc
      961 cgccggcgag cacttccgct ccttcgacac catctgctcc gccacccagg agcggcagga
     1021 cgccgtcgtc gcgctgctgg aggaaccgct cgacgtgatg gtggtcgtcg gcgggtacaa
     1081 cagcagcaac acctgccacc tcgccgagct ggtgcattcg cgcggggtac ccgtctttca
     1141 catcgaggac gcggacgcgg tggaccccga ggcggggacg gtgcgccacc agccgatcgg
     1201 cagcaagcgc gaggagacca cgcccggctg gctcgacggc gcccgcgtcg tcggcctcac
     1261 cgccggtgcc tcgaccccca acaacaagat cggcgagacc gtcgcccgga tctgccgcac
     1321 ggccgggcaa gacctgggag ccgtggtcgg gtagcgggtt gtcgcccttc cgccaggcga
     1381 cggtctccgg ccttcccgcg atcgtgctcc gcggcgagga gctggaggtg gtggccgtcc
     1441 cggcggtcgg gatgaagctc accaacctcc ggcggccccg cgggcgcgag tggctctggc
     1501 gcaacgacca gatgcccctg gcgccgccac ggcccgacgc ctccttcgtc gagaccgcgg
     1561 acagcggtgg gtgggacgag tgcttcccca cggtgtcccc ctcacccgtc cccggcgcgc
     1621 ccgcgggtat gccggcgctg ccggaccacg gcgagctgtg gagtgcggcc tggaccagct
     1681 cggtctacga gcacgccggc ggcgtcaccc tggccgggtc ggcggccggg cgggtcctgc
     1741 cctacgagtt ccaccgagag ctgaccctcg atccgcgcga gccggtgatc cgcctccgct
     1801 atcgggtccg caataccggc gcgacgccct tcccctggat ctggtgcgcc catcccctgc
     1861 tgaacgtcca gccgggcacg acgctggagc tcccgacgat gcaccaggcc aggctcgacg
     1921 cggtccatgg catcgaggcg gcggcgcgcg gcgatatcgt gagctggccg gctgcgttcg
     1981 ggggcgaggg cggacgcttc cggtttcccg ccgagggcgc ctgggcggtg aagctgttcg
     2041 gggacgtggg ggcgtcgggg cgcgccgtgc tcaccgaccc gcggaagggc gagcggctgg
     2101 agatccgggt gagtccggag gaagtgccgc aggtggggat ctggatcaac aaccgcgggt
     2161 gggcccccga gggacggcga ccctactgca acctgggctt ggagcccgcg atcggggcac
     2221 cggacagtct ggaggaggcg gtgcgcgact ggaagaccgc ccggacgctc gaggccggcg
     2281 aggagcaggg ctgggcgctg gaagtccggc tcctggagga aggggaggac taggtcggcg
     2341 cgcggtcgcc ctccgacggc cgctccagcc gcgtgtcctc ccagctcacc ggatcctcga
     2401 tcggctccag gtgggtatcc accacgctgt tcggcaccgc ctcgcggatc cgctgctcga
     2461 ttctctccag caggtcgtgg ccccgctgca ccgtccagct ccccggcacc aggatgtgga
     2521 aggagatgaa ccggcgcgcg cccgcctggc gggtgcggag cgcgtggtag cgcactcccg
     2581 cgccggtgtg ggtgtcgaga atgcccttga tctcgcccag ggtctcctcc ggcagcgagg
     2641 tgtcgagcag gccgtgcatc gagcggtcca ccagcccgaa tcccgagcgc agcacgttga
     2701 gcgccaccgc gatcgccacg atcgcgtcga gccggtgcca gccggtggcc accgcggcgc
     2761 ccacgc
//
LOCUS       DASUYN010000025         3885 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_669788, whole genome shotgun sequence.
ACCESSION   DASUYN010000025 DASUYN010000000
VERSION     DASUYN010000025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3885)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3885)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3885
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_669788"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2088
                     /locus_tag="VF061_00520"
     CDS             <1..2088
                     /locus_tag="VF061_00520"
                     /inference="COORDINATES: protein motif:HMM:TIGR00361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0009290 - DNA import into cell involved in
                     transformation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA internalization-related competence protein
                     ComEC/Rec2"
                     /protein_id="HEX6668005.1"
                     /translation="GRLGGELAAGLARGQCAARLPAERLRLQVRLLEPVDSAGGRAAV
                     DPMAGCRGEVPARWPARSAVRAGARAEVVGRWMPREGLGGRPGGTLLVSQVRVVETSP
                     GPGDRLRNWLFDASRRLYGARAGVVDALILGRRGGIDLELQDRFARSGLVHLLSISGF
                     HVGLITAWVFLLCRLGRLSRSAALVTAAGTSAAYVVFLGWPAPAARAAALAVVLARCR
                     TGQRQVQANALLSATCLAVLVVDPWAALDLGGWLSAAALWGATRFTRWSDRVVGPGFW
                     ARTAASSLGATLATAPITAAFLGTVALAGLALNFPAIPLAALAVPGVLASLVLLPAWS
                     SGAEALAAGAGLGLHLLELCATAGAALPVGYVAMEPGRVSGVLPWIGVLALALWMVGE
                     RNTLGEAGRRAGWCAAVALWLRLAPVQVFTSPDGGGDLALHFLDVGQGDGAVLRTPGG
                     RWLAIDAGPATGRNDAGRRVVAPFLERRGVRALAAILISHAHADHMGGVPALLRRFRV
                     GLVLEPGASVPDPAYGALLAGLDSSGIAWHPARAGERFTLDGVRFSVLHPRPGWAAWG
                     EDVNEDSVVLLVEYGGFQALFTGDAGFPAEAALLGSVGPVDLLKVGHHGSRGSTSGEL
                     LDSLRPLAAVISVGRNDYGHPSPETLTRLERRRVPVLRTDEDGTISVRTSGTTMWIRS
                     RRGEQVYPLTGGD"
     gene            2138..3169
                     /gene="fbp"
                     /locus_tag="VF061_00525"
     CDS             2138..3169
                     /gene="fbp"
                     /locus_tag="VF061_00525"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HEX6668006.1"
                     /translation="MTTIERFIFDQEHRYPEATGELSNLLYDIALAAKIIAAAIRRAG
                     LVNILGAAGNRNVQGEEQQKLDVIANETIKNCLNHTGRVCVMGSEEDEEVVPVPPEYP
                     VGKYAVLFDPLDGSSNIDVNSAVGTIFSIYRRISMEGRGTVADVLQPGCKQVASGYVM
                     YGSSTMLVYTTGQGVHGFTLDPTIGEFLLSHPRIVTPRVGMYYSVNESNFGRWERGMQ
                     SAVRGLKGDVPDVMKPKNSRYIGSLVADFHRNLIAGGIFLYPADTRNPQGKLRLLYEA
                     SPMAFIAEQAEGSATDGVNRILDIIPHKLHQRTPLVIGSREDVGFVADSLRRGASARA
                     SGPVVQPAL"
     gene            3166..>3885
                     /locus_tag="VF061_00530"
     CDS             3166..>3885
                     /locus_tag="VF061_00530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HEX6668007.1"
                     /translation="MKTLYGPGDWAGDPQRDLGRPGEFPFTRGVYPEMYAGRLWTMRQ
                     YAGFGTAEATNQRFKFLLGAGQTGLSCAFDLPTQMGYDSDHPRAEGEVGKVGVAIDSI
                     EDMRLLLAGIPLDKVTTSMTINSTAAILLLLYELVAEDQGVPAAEIGGGTIQNDLLKE
                     YIARGTYVYPPRPSMRLITDIFAYCRETIPRWNTISISGYHIREAGSTAVQEIAFTLA
                     NAIAYVQAAIDTGLDVDDFGPR"
BASE COUNT          500 a         1382 c         1409 g          594 t
ORIGIN      
        1 gggcgtctcg gcggcgagtt ggcggccggc ttggcacggg gacagtgcgc cgcccgcctt
       61 ccggccgaac ggctgaggct ccaggtgcgc ctgctggagc cggtggactc cgccggcgga
      121 agggctgccg tcgatccgat ggcgggctgt cgcggcgagg taccggcgcg atggcccgca
      181 cggagcgcgg tccgggcggg tgctcgggcg gaggtcgtcg ggcggtggat gccgcgcgag
      241 ggcctcgggg gccgccccgg cggcacgctt ctggtcagcc aggtccgggt ggtggagacg
      301 agccccgggc cgggcgaccg acttcgcaac tggctgttcg atgccagccg ccgcctgtac
      361 ggcgcccgtg cgggcgtagt ggatgccctc atcctcggtc ggcggggcgg aatcgacctc
      421 gagctgcagg atcgtttcgc tcgctcgggg ctggttcacc tgctctcgat ttccggcttt
      481 cacgtcggac tcatcaccgc gtgggtcttc ctgctctgcc ggctgggccg cctgtcccgc
      541 tccgccgcgc tggtgacggc cgcgggcacc agcgccgcgt acgtcgtatt cctgggctgg
      601 cccgcgcccg cggcgcgcgc ggcggcgctc gcggtagtgc tcgcccggtg ccgcaccggt
      661 cagcgccagg tccaggcgaa tgcgctcctg tcggccacct gcctcgccgt gctggtcgtg
      721 gatccgtggg cggcgctgga cctcggcggc tggctctcgg cggcggcgct gtggggggcg
      781 accaggttca cccgctggtc cgatcgcgtg gtggggccgg ggttctgggc ccgcaccgcg
      841 gcctcgtccc tcggcgcgac cctcgccacc gcgccgatca ccgccgcctt cctcggcacg
      901 gtcgcgctgg cgggactggc gctcaacttc ccggcgattc cgctcgcggc gctcgcagtc
      961 cccggtgtcc tggccagcct cgttctgctg ccggcctggt cttccggcgc cgaggcgctg
     1021 gcagcggggg ctggcctggg tctccacttg ctcgagctgt gcgccacggc gggcgcggcg
     1081 ctgccggtgg ggtacgtcgc gatggagccc ggcagggtga gcggagtgct tccctggatc
     1141 ggtgtactgg cactggcgct ctggatggtg ggggagcgga acactctggg ggaggcgggg
     1201 cgccgcgcgg ggtggtgcgc ggcggtcgcg ctctggctcc ggctcgcgcc ggtgcaggtc
     1261 ttcacgtcgc ctgacggcgg gggagacctc gcgttacatt ttctcgacgt ggggcagggg
     1321 gacggggcgg tgcttcgcac gccgggcggg cgatggttgg cgatcgacgc cggcccggcg
     1381 actgggcgca acgacgccgg tcgcagagtg gtcgccccct ttctcgagcg ccggggtgtg
     1441 cgggccctgg ccgccatcct catctcccac gcgcacgcgg accacatggg cggcgtcccc
     1501 gctctgttgc gccggttccg cgtgggtctc gtgctcgagc cgggagcctc ggtgccggac
     1561 cccgcctacg gtgcgctgct tgcggggctc gactcctccg ggatcgcgtg gcacccggcc
     1621 cgggccggcg agcgcttcac gctcgacggc gtgcgattct cggtgctgca cccccggccc
     1681 ggctgggccg cgtggggcga ggacgtgaac gaggactccg tcgtcctgct ggtcgagtac
     1741 ggcgggttcc aggcgctgtt caccggcgat gcgggctttc cggccgaggc ggcgctgctc
     1801 ggctcggtcg gaccggtgga cctgctcaag gtggggcacc acggcagccg gggcagcacc
     1861 agtggggagc tgctcgattc gctccgcccg ctcgcggcgg tcatctcggt cggccggaac
     1921 gactacgggc acccatcgcc ggagacgctg acgcggctcg agcgccgccg cgtgcccgtg
     1981 ctccgcaccg acgaggacgg cacgatcagc gtgcggacca gcgggacgac gatgtggatc
     2041 cggtcccggc ggggcgagca ggtctacccg ctgaccggcg gcgactgagc gccgcgcttc
     2101 tcgattcaat tcccggggga acctcgtgca gacgtccgtg acgaccatcg agcggttcat
     2161 cttcgaccag gagcaccgct acccggaggc gaccggcgag ctctccaacc tgctctacga
     2221 catcgccctc gcggccaaga tcatcgccgc ggcgatccgg cgggcggggc tggtcaacat
     2281 cctgggcgcc gcgggcaacc ggaacgtgca gggggaggag cagcagaagc tcgacgtcat
     2341 cgccaacgag accatcaaga actgcctcaa ccacaccggc cgggtgtgcg tgatgggctc
     2401 ggaggaggac gaagaggtcg tgccggtccc ccccgagtac ccggtcggca agtacgcggt
     2461 cctcttcgac cccctcgacg gctcctccaa catcgacgtc aactccgcgg tcgggaccat
     2521 cttcagcatc taccgccgga tcagcatgga gggccggggc accgtggccg acgtgctcca
     2581 gccggggtgc aagcaggtgg cgtccggcta cgtgatgtac ggctcgagca cgatgctggt
     2641 gtacaccacg ggccaggggg tccacgggtt caccctggac ccgaccatcg gcgagttcct
     2701 gctctcccat ccgcggatcg tgaccccccg ggtcgggatg tactacagcg tgaacgagag
     2761 caacttcggc cgctgggagc ggggcatgca gagcgcggtc cgggggctca agggcgacgt
     2821 tcccgacgtg atgaagccga agaacagccg ctacatcggc tcactggtcg cggatttcca
     2881 tcggaacctg atcgcgggcg ggatcttcct ctaccccgcc gacacccgga atccccaggg
     2941 caagctgcgc ctgctgtacg aggcgagccc gatggcgttc atcgccgagc aggccgaggg
     3001 ctcggccacc gacggagtca accggatcct cgacatcatt ccgcacaagc tccaccagcg
     3061 cacgccgctc gtgatcggct cccgcgagga cgtcgggttc gtcgccgaca gcctgcggcg
     3121 gggcgcctcg gcgcgcgcca gcggcccggt cgtccagccg gccctgtgaa gaccctgtac
     3181 ggcccgggcg actgggccgg cgatccccag cgcgacctcg gccggcccgg ggagttcccg
     3241 ttcacccggg gcgtataccc cgagatgtac gcgggtcggc tgtggacgat gcggcagtac
     3301 gccggcttcg gcaccgccga ggccaccaac cagcggttca agttcctcct cggcgccgga
     3361 cagaccgggc tctcgtgcgc cttcgacctg cccacccaga tgggttacga ctccgaccat
     3421 ccgcgggccg agggagaggt cggcaaggtc ggcgtggcca tcgactccat cgaggacatg
     3481 cgcctgctgc tggccggcat cccgctggac aaggtcacca cgtcgatgac catcaactcg
     3541 acggcggcca tcctcctgct gctctacgag ctggtggccg aggaccaggg cgtcccagcg
     3601 gccgagatcg gcggcgggac gatccagaac gacctgctca aggagtacat cgcccgcggc
     3661 acctacgtgt acccgccccg gccgtcgatg cggctcatca ccgacatctt cgcctactgc
     3721 cgcgagacca tcccccgctg gaacaccatc tccatctccg gctaccacat ccgcgaggcc
     3781 ggttcgacgg ccgtgcagga gatcgccttc acactggcca acgccattgc ctacgtgcag
     3841 gcggccatcg acaccgggct cgacgtcgac gacttcggcc cccgg
//
LOCUS       DASUYN010000026         2960 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_670457, whole genome shotgun sequence.
ACCESSION   DASUYN010000026 DASUYN010000000
VERSION     DASUYN010000026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2960)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2960)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2960
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_670457"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..712)
                     /locus_tag="VF061_00535"
     CDS             complement(<1..712)
                     /locus_tag="VF061_00535"
                     /inference="COORDINATES: protein motif:HMM:NF015084.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668008.1"
                     /translation="MAPDWRLLLDLEGRPGWQNMALDQALLARAGRGERWLRLYRWAP
                     HCLSFGRHEPALRRYDRADIEARALDVVRRPTGGRAVWHADELTYALAAPAEPFGGLR
                     QAYQEIHRMLLAALRLLGVRAGMAPARAAVPVDAGSCFASRAGGEIIVGGRKLVGSAQ
                     LREGGALLQHGSLLLGGRQTVVREVTRGSAPPDLAGALAETAAGGRDVGEVADAVARA
                     ASQRWRGPWERCAPDAALL"
     gene            complement(702..>2960)
                     /gene="gcvP"
                     /locus_tag="VF061_00540"
     CDS             complement(702..>2960)
                     /gene="gcvP"
                     /locus_tag="VF061_00540"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase"
                     /protein_id="HEX6668009.1"
                     /translation="DEGVVGCLLQYPATDGALHDYKTVAERAHAAKALVTAATDLLAL
                     TLLVPPGEWGADIAVGNSQRFGVPMGYGGPHAAFFATKEAYKRFMPGRIIGVSRDRDG
                     RPALRMALQTREQHIRRDKATSNVCTAQVLLAVMAGMYAVYHGPGGLRRIAERVHTRT
                     VLLANALRRLRYRIVHEAYFDTLCVEVPEWALPRLLDAARVRQINLRPLPPTRLCIAL
                     DETVTLGDLADLIAVFSLNEALPFMLDDIGVKSERAIPAPLQRKTSYLEHPVFHRHHS
                     ETEMLRYIKRLEARDLSLTSAMIPLGSCTLKLNATTEMMPVSWREFNRLHPFAPRDQA
                     AGYELLFSQLEHQLAEITGFAAVSLQPNAGSQGEYAGLLVIRAYHRSRGEGHRTTCLI
                     PQSAHGTNPASAVMAGMQVVPIKSDAHGNIDLDDLRAKAAAHRDTLAALMVTYPSTHG
                     VFEGSIKEICRAVHEHGGQVYMDGANMNAQVGLCRPGDIGADVCHLNLHKTFCIPHGG
                     GGPGMGPIGVAKHLAPFLPGHPIVDLAHPHACGTVSAAPWGSAAILPISWAYIALMGY
                     DGLTEATKIAILNANYIARRLKGHYEVLYSAPDGMVAHECIIDTRPFKASAGVDVEDI
                     AKRIIDYGFHPPTVSFPVAGTLMIEPTESESREELDRFCDAMIAIREEIREIEEGRAD
                     RETNLLTMAPHTLEQVISDGWDRPYPRERAAYPSRAVREHKVWPTVGRIDAAYGDRNL
                     VCVCPPMEAYGA"
BASE COUNT          402 a         1046 c         1087 g          425 t
ORIGIN      
        1 ccaggagtgc ggcgtcgggg gcgcagcgct cccaggggcc gcgccaccgc tgggaggccg
       61 cccgggccac cgcatcggcc acctccccga catcccgccc gccggccgcc gtctccgcca
      121 gggcgccggc gagatcgggg ggagcgctgc ctcgcgtgac ctcccgcacg accgtctggc
      181 gaccgccgag cagcagcgag ccgtgttgga gcagcgcgcc gccctccctg agctgggcgc
      241 tgcccaccag cttgcgtccg ccgacgatga tctcgccgcc ggcccgcgag gcgaagcacg
      301 agcccgcatc gaccggtacc gcggcgcgcg ccggcgccat cccggcgcgc acgccgagga
      361 gccggagcgc cgcgagcagc atccggtgga tctcctggta cgcctggcgc agcccgccga
      421 acggctccgc cggcgccgcc agcgcgtagg tgagctcgtc ggcgtgccac accgctcgtc
      481 cgccggtggg tcgccgcacg acgtcgagcg cgcgcgcctc gatgtcggcg cggtcatagc
      541 gccggagggc gggctcgtgc cggccgaagg agaggcagtg cggtgcccag cgatagaggc
      601 ggagccagcg ctccccacgg ccggcgcgcg ccagcagcgc ctggtccagc gccatgttct
      661 gccagcccgg ccggccctcg aggtcgagca ggaggcgcca gtcaggcgcc atacgcctcc
      721 atcggcgggc agacgcagac caggttccgg tcgccgtagg ccgcgtcgat ccggccgacc
      781 gtcggccaca ccttgtgctc ccgcacggcg cggctgggat aggcggcccg ctcccgcggg
      841 tagggccggt cccacccgtc cgagatgacc tgctccaggg tgtgcggcgc catggtgagg
      901 aggttcgtct cccggtcggc ccggccctcc tcgatctcgc gaatctcctc ccggatcgcg
      961 atcatcgcgt cgcagaagcg gtcgagctcc tccctggact cgctctcggt cggctcgatc
     1021 atgagcgtgc cggccacggg gaacgagacc gtcggcgggt ggaacccgta gtcgatgatc
     1081 cgcttcgcga tgtcctccac gtccaccccg gcggaggcct tgaacgggcg ggtgtcgatg
     1141 atgcactcgt gcgccaccat cccgtcgggg gcggagtaga gcacctcgta atggcccttg
     1201 agccgccggg cgatgtagtt cgcgttcagg atcgcgatct tggtcgcttc ggtcagtccg
     1261 tcatagccca tgagcgcgat gtacgcccac gagatcggga gaatcgcggc gctgccccac
     1321 ggggccgcgg agacggtgcc gcaggcgtgg ggatgcgcca gatccacgat cggatggccc
     1381 ggcaggaacg gcgcgaggtg tttcgccacc ccgatcggac ccatccccgg cccgccgccg
     1441 ccgtggggaa tgcagaaggt cttgtgcagg ttgaggtggc agacgtcggc gccgatgtcg
     1501 cccgggcggc agaggcccac ctgcgcgttc atgttggcgc cgtccatgta gacctggccc
     1561 ccgtgctcgt ggacggcgcg gcagatctcc ttgatggagc cctcgaacac gccgtgggta
     1621 ctggggtagg tcaccatcag cgcggccagc gtgtcgcggt gggccgccgc cttggcccgc
     1681 aggtcgtcga ggtcgatgtt gccgtgcgca tcgctcttga tcgggaccac ctgcattccc
     1741 gccatcaccg cgctcgccgg attggtgccg tgggcggact gggggatgag gcaggtggtg
     1801 cggtgaccct ccccccgcga ccggtggtac gcccggatca ccagcagccc ggcgtactcg
     1861 ccctgcgacc cggcgttggg ctggagcgag accgccgcga acccggtgat ctccgccagc
     1921 tgatgctcca gctggctgaa gagcagctcg tagcccgccg cctggtcgcg gggggcgaac
     1981 gggtgcagcc ggttgaactc ccgccagctc accggcatca tctcggtcgt cgcgttgagc
     2041 ttgagggtgc aggagccgag cgggatcatc gccgaggtga gcgagaggtc ccgcgcctcg
     2101 agacgcttga tgtagcgcag catctcggtc tccgagtggt gccggtggaa gaccggatgc
     2161 tccaggtacg aggtcttccg ctgcaacggc gccgggatcg cgcgctcgga cttgaccccg
     2221 atgtcgtcca gcatgaaggg cagcgcctcg ttcagcgaga agacggcgat gagatccgcg
     2281 aggtcgccga gcgtgacggt ctcgtccagc gcgatgcaga ggcgggtcgg cggcagcggc
     2341 cggagattga tctgccgcac ccgggcggcg tccagcaggc ggggcagggc ccactccggc
     2401 acctcgacgc agagcgtgtc gaagtacgcc tcgtggacga tgcggtagcg gagccggcgc
     2461 agcgcgttgg ccagcagcac cgtgcgggtg tgcacccgct cggcgatgcg gcggaggccg
     2521 ccggggccgt ggtagaccgc gtacatgccc gccatcaccg cgagcagcac ctgcgcggtg
     2581 cagacgttgc tcgtcgcctt gtcgcggcgg atgtgctgct cccgggtctg cagcgccatg
     2641 cgcagcgcgg ggcggccgtc gcggtcgcgg gagacgccga tgatccgccc cggcatgaac
     2701 cgcttgtagg cttccttggt ggcgaagaac gcggcgtggg gcccgccgta ccccatcggc
     2761 accccgaagc gctggctgtt gccgaccgcg atgtccgcac cccactcgcc gggcggtacc
     2821 agcagggtca gcgcgagcag gtcggtcgcg gccgttacca gcgccttggc cgcgtgggcc
     2881 cgctcggcaa cggttttgta gtcgtggagt gcgccatcgg tggcgggata ctggagcagg
     2941 cagccgacca cgccctcgtc
//
LOCUS       DASUYN010000027         4394 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_671075, whole genome shotgun sequence.
ACCESSION   DASUYN010000027 DASUYN010000000
VERSION     DASUYN010000027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4394)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4394)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4394
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_671075"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..713)
                     /locus_tag="VF061_00545"
     CDS             complement(<1..713)
                     /locus_tag="VF061_00545"
                     /inference="COORDINATES: protein motif:HMM:NF015155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HEX6668010.1"
                     /translation="MEPFARALVRWRWAVLVVWAVIGVAAGVRAPATPGLLNIRGGSA
                     RETEASRTEKLLNDRFARPIGEFFAVTLEGPTRFDSGPARAMLDTLLATLAREPHVRG
                     LVSYPGTGDTTFLSRDRRATFVLVAIDLENGDSAGALVPPTRAAVRRALAHSDDPGLY
                     RARVTGRAPLDLDVRTVVTEDSQRGERALLPLTLVILVLAFGALVAAALPLVVGVLAI
                     AVSLAIIGLLTSVTPMSIFV"
     gene            843..1646
                     /locus_tag="VF061_00550"
     CDS             843..1646
                     /locus_tag="VF061_00550"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF012630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031012 - extracellular matrix [Evidence
                     IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="matrixin family metalloprotease"
                     /protein_id="HEX6668011.1"
                     /translation="MRRALLPLVTLALALLILVDRIGHMKLAADRAGGAVQGPNATQS
                     ATVHPDAGQEVIHQDGAAGRAGGEIGDRLVRLATRERLWRESSGTYLDSLMVSTDSVV
                     RRWPDRWGKPIKLHIVEGGAPGYLPKMADFARDAFGRWENTGVGIKFQVVADSASADV
                     VIRWIDHFDFDRAGQTDLTWDQAGRVRRASISLALRTHNGTVLPDAALLSVAVHEAGH
                     ALGLPHSSDTSDVMFPATRTGTLTDRDLRTIEVLYRLPPGPVRDELAAH"
     gene            1663..2838
                     /locus_tag="VF061_00555"
     CDS             1663..2838
                     /locus_tag="VF061_00555"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX6668012.1"
                     /translation="MTALARRAALALLLTMSPLAPSAAQSYADVDRAALAGIRDGLYP
                     GAVVIIGRRDSILYARGYGHFTWNPASRVPDPDSTLWDIASITKVVATAASAMRLADG
                     GTLDLDTPVRRYLPRFSGGLKNRVTVRMLLDHTSGLKSYVPIYKKAGRSRTRMVDLLY
                     AQPLIRPPGDSAEYSDLNSMLLGLLVESVSGSALDRFADTAVFHPLGMTETRFRPPAR
                     LKRRIAPAGIWRGQPVPGDVNDQNAAAFGGVAGHAGVFSTGRDLARFAQVWLRDGMGP
                     TGQWVRPATLRQFLTKGPRSGTRLLGWDSPELNGEEPSIYGTLITQSAYGHTGFTGTE
                     LWIDPSHDLFLVFLTNRAFDPRARDSVKGLKVVRTELSDAAIRLVPHTCAQELVARC"
     gene            2916..3245
                     /locus_tag="VF061_00560"
     CDS             2916..3245
                     /locus_tag="VF061_00560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-sulfur cluster assembly factor"
                     /protein_id="HEX6668013.1"
                     /translation="MTAPEAPEHPVPSPDTIRKALRAVKDPELNLNIVDIGLVYDIES
                     SDQGDVKVKMTLTSPGCPAGGEIIEDVRKVAGDLEGVRAVEVELVWDPYWTPERMDPR
                     VRAFLGF"
     gene            complement(3250..>4394)
                     /locus_tag="VF061_00565"
     CDS             complement(3250..>4394)
                     /locus_tag="VF061_00565"
                     /inference="COORDINATES: protein motif:HMM:NF013755.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ribonuclease D"
                     /protein_id="HEX6668014.1"
                     /translation="QLIRTGAELDALAGRLGSEPLLAVDTEAASFHRYLDRVYLLQIS
                     SRAETAVVDPLATGGLRAIGELLADPAIEIVFHDADYDLRLLHREYGYTAQTIFDTRI
                     AAQLLNEPGVGLAALLEKYLDVRLDKRFQRADWSARPLSPEMLAYAASDTHYLPRLRD
                     ILRQRLEERGRLAWAYEEFALLEDIRPTPADQVEPGWLRLKGAKALRGRELAVLRELW
                     EWREGTARRADRATFRVLNNEPMLAMAKNPPTDLAALKAIPGVSSDQADRRGRELLAA
                     IRRGLDLPESDLPRLTRPPRRVQDQAYEERLERLKAARNRLAQEYDLAPGVVCPNGTL
                     EAIARLDPTTTAALGEVTELRRWQLREFGEELLKALRGPPAEDGGG"
BASE COUNT          645 a         1579 c         1528 g          642 t
ORIGIN      
        1 acgaagatgg acatcggggt gacgctggtc agcagcccga tgatcgccag ggacaccgcg
       61 atggcgagca cgccaaccac cagcggcagg gcggcggcca ccagcgcgcc gaaggcgagc
      121 accaggatca ccagcgtgag gggcagcagc gcgcgctcgc cccgctggct gtcctcggtg
      181 acgaccgttc gcacgtcgag gtcgagtggg gcccgaccgg tgacccgcgc gcgatagagc
      241 ccgggatcgt ccgagtgcgc gagcgcgcgt cggaccgccg cccgcgtggg cgggaccagg
      301 gcgccggcgc tgtcgccgtt ctccaggtcg atcgcgacca ggacgaaggt ggcccgccgg
      361 tcgcggctca ggaacgtggt gtcgccggtg ccgggatagg agaccaggcc ccgcacgtgg
      421 ggctcgcgcg cgagggtggc gagcagcgtg tcgagcatcg cgcgcgccgg gccggagtcg
      481 aaacgggtag gaccttcgag cgtgaccgcg aagaactcgc cgatcgggcg ggcgaagcgg
      541 tcgttcagca gcttctcggt gcgcgaggct tcggtctcgc gcgcgctgcc gccgcggatg
      601 ttgaggagcc ccggcgtggc cggcgcacgg accccggccg ccaccccgat caccgcccac
      661 acgaccagca ccgcccagcg ccagcgcacc agcgcccggg cgaagggttc catcagttgc
      721 aggaaggcct ccggactccg gtgccgcgcc cgagcgcgcg gcggccaatg ttaggccggt
      781 gcagttctcg gcgctagcgc gctggcgact tggcctgtcc cttgccaata ttccgacgaa
      841 ccatgcgtcg tgccctcctc cccctcgtca ccctggccct cgccctgctg atcctggtag
      901 accggatcgg ccacatgaag ctcgccgccg accgggccgg cggagccgtg caggggccga
      961 acgcgaccca gtccgcaacc gtgcatcccg atgcggggca agaggttatc catcaggacg
     1021 gggctgcggg gcgcgccggg ggcgagatcg gtgaccgcct ggtgcgcctg gccaccaggg
     1081 aacggctctg gcgcgagtcg tccgggacct acctcgattc cctcatggtg agcaccgact
     1141 cggtggtgcg gcgctggccc gacaggtggg gcaagccgat caagctccac atcgtggagg
     1201 ggggggcacc gggctatttg ccgaagatgg cggactttgc ccgcgacgcg ttcgggcggt
     1261 gggagaacac cggagtcgga atcaagttcc aggtggtggc cgactccgcg agcgccgatg
     1321 tggtgatccg ctggatcgac cacttcgact tcgatcgtgc ggggcagacc gatctgacct
     1381 gggaccaggc gggacgggtc cgccgggcct ccatatcgct cgccctccgg acccacaacg
     1441 gcaccgtgct gcccgatgcg gcgctgctct ccgtcgccgt gcacgaggcc ggacatgccc
     1501 tcggcctgcc gcactcctcc gacaccagcg acgtgatgtt cccggcgacc cgcaccggca
     1561 ccctcaccga tcgggatctt cgcaccatcg aggtgctgta ccggctgccg cccgggccgg
     1621 tgcgcgacga gctcgccgcc cattgagccc gtggagcgct cgatgacggc tctcgcccgg
     1681 cgcgcggccc tcgccctcct cctcacgatg tcgccgctcg cgccttccgc cgcccagagc
     1741 tatgccgacg tggaccgcgc ggcgctagcc ggtatccggg acggcctcta tcccggggcc
     1801 gtggtcatca tcggccggcg tgattcgatc ctctacgccc ggggctacgg ccacttcacc
     1861 tggaatccgg cctcccgggt gcccgatccc gactccaccc tctgggacat cgcctcgatc
     1921 accaaggtgg tggccaccgc ggcctcggcg atgcgcctgg cggatggcgg gaccctggac
     1981 ctcgacacgc cggtccggcg ctacctgccc cggttctccg gaggcctcaa gaaccgggtg
     2041 acggtccgga tgctcctgga ccacaccagc ggcctcaaga gctatgtgcc gatctacaag
     2101 aaggctgggc gcagccgtac ccggatggtg gacctgctct acgcccagcc gctgatccgg
     2161 ccgccgggcg actcggcgga atacagcgac ctgaactcga tgctgctcgg gctcctggtc
     2221 gagtcggtgt cgggctccgc tctcgaccgg ttcgccgaca ccgcggtgtt ccatcccctc
     2281 ggcatgacgg agacacgctt tcggcccccg gcgaggctca agcgtcgcat tgcgccggcc
     2341 ggcatctggc ggggtcagcc ggtgccgggt gacgtgaacg accagaacgc ggcggcgttc
     2401 ggcggcgtgg ccgggcatgc cggcgtgttc tccaccggcc gggacctggc gcggttcgcc
     2461 caggtctggc tgcgggacgg catggggccg acggggcaat gggtccgacc ggccaccctg
     2521 cgccagttcc tcaccaaggg gccccgcagc ggcacccgct tgctgggctg ggactccccc
     2581 gagctgaacg gcgaggagcc gagcatctac ggcaccctga tcacccagtc tgcgtacggg
     2641 cacaccgggt tcacgggcac cgagctgtgg atcgacccct cccacgatct cttcctcgtc
     2701 ttcctcacca accgggcgtt cgatccccgg gcccgggatt cggtcaaggg cctcaaagtg
     2761 gtccggaccg agctctccga cgcggcgatc cgcctggtgc cccacacctg cgcccaggag
     2821 ctggtcgcgc gctgttaggt tactcctgat gtggttgtca tcctgagcga agcgaaggag
     2881 tccaggtgac acaagaccag gaaagcgagc agcccgtgac cgccccggaa gcccctgagc
     2941 atcccgtccc cagcccggac accatccgca aggcgctccg cgcggtgaag gacccggagc
     3001 tcaatctcaa catcgtcgac attggcctgg tctacgacat cgagtcgagc gaccagggcg
     3061 acgtgaaggt gaagatgacc ctcacctcgc cgggctgtcc cgcgggcggt gagatcatcg
     3121 aggatgtgcg caaggtggcg ggggatctcg agggcgtgcg agccgtcgag gtcgagctgg
     3181 tgtgggaccc gtactggacc cccgagcgga tggacccgag ggtgcgcgcg tttctgggct
     3241 tctgaccggc tagcctccgc catcctccgc cggaggaccc cgcagcgcct tcagcagctc
     3301 ctccccgaat tcccgcagct gccagcggcg cagctccgtc acttcgccca gcgcggcggt
     3361 cgtcgtcgga tccagccgcg cgatcgcttc cagggttcca ttgggacaga ccacgcccgg
     3421 cgcgaggtcg tactcctgcg ccaagcggtt gcgtgcggcc ttgagccgct cgagtcgctc
     3481 ctcgtacgcc tgatcctgca cccggcgcgg cggccgggtg agccgcggca gatcgctctc
     3541 cggcaggtcc aggccgcgac ggatcgccgc gagcagctcg cgcccccggc ggtccgcctg
     3601 gtccgagctc acgccgggga tcgccttgag cgccgcgaga tcggtgggcg gattcttggc
     3661 catggccagc atcggctcgt tgttgaggac cctgaacgtg gcccgatcgg cccggcgcgc
     3721 cgtcccttcc cgccactccc acagctccct gagcacggcg agctcgcggc cgcggagcgc
     3781 cttcgcgccc ttgagacgga gccagccggg ctcgacctga tccgccggcg tcgggcggat
     3841 atcctccagc agcgcgaatt cctcgtaggc ccaggcgagc cggccccgct cttccagccg
     3901 ctgccggagg atatcccgca ggcgtggcag gtaatgagtg tccgaggccg cgtaggccag
     3961 catctcgggt gaaagcggcc gcgccgacca gtcggcccgc tggaagcgct tgtccagccg
     4021 gacatcgagg tatttctcca ggagggcggc gagaccgacg cccggctcgt tgaggagctg
     4081 ggcggcgatg cgggtgtcga agatggtctg cgcggtgtag ccgtactctc ggtggaggag
     4141 gcgaagatcg taatcggcgt catggaagac gatctcgatc gcgggatccg ccagcagctc
     4201 gccgatcgcg cgcagccccc cggtcgcgag cgggtccacc accgcggtct ccgcccgcga
     4261 ggagatctgg aggaggtaca cccgatcgag atagcgatgg aagctcgcgg cctccgtgtc
     4321 caccgcgagc agcggctccg accccagccg cccggccagc gcgtccagct cggctccggt
     4381 ccggatcagc tgca
//
LOCUS       DASUYN010000028         4242 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_450957, whole genome shotgun sequence.
ACCESSION   DASUYN010000028 DASUYN010000000
VERSION     DASUYN010000028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4242)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4242)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4242
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_450957"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(717..1502)
                     /locus_tag="VF061_00570"
     CDS             complement(717..1502)
                     /locus_tag="VF061_00570"
                     /inference="COORDINATES: protein motif:HMM:NF013586.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016805 - dipeptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HEX6668015.1"
                     /translation="MEPDKVEAPGEGNRQAWKTGQCRKISRVLPRGRYRNRKYLHSIR
                     LALAVLVNACAGPAPAAQSVEAPPAEVAPDAVAESLLVDVRAVDGTIRVEARYATADN
                     FTGAPLPGYEAQRVLLRREPAAALGRVQARLRREGLGLKVFDGYRPVRATLAMVDWTE
                     RTARGDLVADGYIARRSRHNLGVAVDLTLVELATGEELPMGTAFDTFTAEAHTASAEG
                     PVRSHRRRLVRTMEAEGFVNYEKEWWHFSYPVEGALPFDLVIR"
     gene            1503..2006
                     /locus_tag="VF061_00575"
     CDS             1503..2006
                     /locus_tag="VF061_00575"
                     /inference="COORDINATES: protein motif:HMM:NF013440.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GreA/GreB family elongation factor"
                     /protein_id="HEX6668016.1"
                     /translation="MIHEMREKLSREVDQLSHELNVLLPQAIAQAVELGDLRENSEYK
                     AALERQQFVQARLGQLHQRLNQLGQLANHEAPSDRVGLGSTITVLDLETNETDTYVVV
                     LAEMMDIDAGHISLASPLGRALANGRVGDEIGLRLPTTTRRLRITELVTVHQAGANAS
                     NGRKGEK"
     gene            2016..2384
                     /locus_tag="VF061_00580"
     CDS             2016..2384
                     /locus_tag="VF061_00580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES family protein"
                     /protein_id="HEX6668017.1"
                     /translation="MDFPKKQLLVVGDRVLITPEDGDDRTKVGLYLPATAIDSQQVQT
                     GLIVATGPGDPVADLSSLDDEPWKTDRRDGKSRAMQARVGDHAIFFRKAAVEITFEEK
                     RYLVVPQAAILVLIRDDLPI"
     gene            2407..2925
                     /locus_tag="VF061_00585"
     CDS             2407..2925
                     /locus_tag="VF061_00585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668018.1"
                     /translation="MCYDLRIASSLTLSEVRSMLPAGVTADSLPSSEVARFRTLLPAA
                     QTAAHLRVGACSCDLVRPRLPDPREDERHLRARYKALGLPRERIIRELERHRRAAAGV
                     SEPAGGWRAALAAFVAEHARNAGPTLFRLSFHSGAVIPGETIRRTSRTVADVRADPEG
                     WLEEGPAILVLR"
     gene            3255..4151
                     /locus_tag="VF061_00590"
     CDS             3255..4151
                     /locus_tag="VF061_00590"
                     /inference="COORDINATES: protein motif:HMM:NF023568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX6668019.1"
                     /translation="MKRFGGWSATARAEDAGPPTPARAYQGKTFEGAGGLSLFRQAWR
                     PDGPSRAVLVNIHGLGDHSGLYPTLVEHCTGRAITVHAMDLRGNGRSDGQRAYVERWE
                     EYREDLRRFIGLVREEEGDRPVFLLGNSLGGLIVLDYALHHPEGLRGVIAASPPLGRL
                     AVPAPLLALGRVFSRVWPRFSLRTGMDLSGLARDPVVVQTVLADPLFHRVGTARLSTE
                     VVAAIARVRAAAPRFSLPLLVLHGSADRMVPPEGSREFVARVGHPDRQLREYAGAFHV
                     LFADLDHERVLADLERWIEAHL"
BASE COUNT          605 a         1536 c         1465 g          636 t
ORIGIN      
        1 ctcctgggaa gccctgagga cagtacctcg ccaccctccc gggtcaccag cacgaagtcc
       61 tcgatccgga tgcccagcct ctcggccggg atgtagatcc cgggctccac cgtgagcacc
      121 atgccaggct ccagcagacg ggagtacgcc ccgggatcgt ggacgttcat ccccagccag
      181 tgcgacagcc catggacgaa gtagcgctcg cagcccgacc cgccgcagag gctccacccg
      241 ggccagatcc cggcgcccgg cggtcagccg ggtggagtcg ctcgggagcg ggcgcacgtc
      301 cgcgatcccg ctgagccgcg acgcttccgg tcccggacct aacgatgcgc cggtccagcg
      361 ctcgtgtccg ggctcggtct ccggcaggta gaggatgacc gaatcggggc cgcccgtccg
      421 cgccaccagc gccagtctgc cgcccggcgc ctcgagcccg gtcagataga agaaatcgtt
      481 cgcttcccgg tagtcgctgt cctgcgggta gtcgacttcg atgctgcgga gcctcgcggc
      541 ggcgacgatg gccacaccgt cgcccagccg cgcgaggagc gccgcccgcc gcgcggcgag
      601 ccgctccgcc ggcaccggcc cggcggggga tccggcctgg gcggcaccgg ccgaagggag
      661 tacggggagc cacaggatcg ccgagagcag caggcaggcg cccccgtggc gcctcctcac
      721 cggatcacca gatcgaacgg gagggctccc tcgaccggat agctgaagtg ccaccactcc
      781 ttctcataat tcacgaagcc ctccgcctcc atcgtgcgga ccaggcgccg gcgatggctc
      841 cgcaccggcc cctcggcgct cgccgtgtgg gcctccgccg tgaacgtgtc gaacgcggtg
      901 cccatcggaa gctcctcacc cgtcgccagc tccaccaggg tgaggtccac ggcgacaccg
      961 aggttatggc ggctccgccg cgcgatgtac ccgtcggcca ccagatcacc tcgggcggtc
     1021 cgctcggtcc agtccaccat ggccagggtg gcccgcaccg gccggtaccc gtcgaatacc
     1081 ttgagaccca gcccttcccg ccgaagccgg gcctgcaccc ggcccagtgc cgcggccggc
     1141 tcgcggcgga ggagcacccg ctgggcctcg taaccgggca agggggcgcc ggtgaagttg
     1201 tcggccgtgg cgtagcgtgc ctccacccgg atcgtgccgt ccaccgcccg cacgtccacc
     1261 agcaggctct ccgcgaccgc gtccggggcg acctccgccg gcggcgcctc caccgactgg
     1321 gcggccgggg ccggtccggc gcaggcgttg accaggaccg ccagtgctaa cctgatggag
     1381 tgcagatact tccggttgcg gtaccttccg cgcggcagga ctcgggatat ctttcgacac
     1441 tgtcctgtct tccaggcctg gcgattcccc tcgccaggcg cttctacctt atctggttcc
     1501 atatgatcca cgagatgcgg gagaagctga gccgcgaggt cgatcagctc agccacgaac
     1561 tcaacgtcct gctgccgcag gccatcgccc aggcggtcga gctaggcgat ctgcgggaga
     1621 actcggagta caaggccgcg ctcgagcgcc agcagttcgt gcaggcgcgc ctcggccagc
     1681 tccaccagcg cctcaaccaa ctgggccagc tcgccaatca cgaggccccc agcgatcggg
     1741 tgggcctcgg gtccaccatc accgtgctcg atctggagac caacgagacc gacacgtacg
     1801 tcgtggtgct cgccgagatg atggatatcg acgccgggca catctcgctg gcctcaccgc
     1861 tcggccgggc cctggccaat ggccgggtcg gcgacgagat cggcctccgt ctgcccacca
     1921 ccacacgccg gctccggatc accgagctgg tgacggtgca ccaggccggc gccaatgcct
     1981 ccaacggccg gaagggtgaa aagtaagctc cgcccatgga cttcccgaag aagcagctgc
     2041 tggtcgtcgg tgaccgggtc ttgatcaccc ccgaggacgg ggatgacaga accaaggtgg
     2101 gactctacct gcccgcgacc gcgatcgatt cccagcaggt ccagaccggg ctgatcgtgg
     2161 cgaccggccc gggcgacccg gtcgccgacc tcagcagtct cgacgatgag ccgtggaaga
     2221 cggatcgccg cgacggcaag agccgcgcga tgcaggcgcg ggtcggcgac catgcgattt
     2281 tctttcgcaa ggccgcggtc gagatcacct tcgaggagaa gcgctacctc gtggtgcccc
     2341 aggcggcgat cctggtgctg atccgggacg acctgcccat ctgaggtccc tggtcgggac
     2401 cgccccgtgt gctacgacct gaggatcgcc agctcgctca cgctgagcga ggtgcggtcc
     2461 atgctgccgg ccggcgtcac ggccgattcc ctgccctcga gcgaggtggc acgctttcgc
     2521 acgctcctcc ccgcggcgca gacggctgca cacctgcggg tgggcgcctg ctcctgcgat
     2581 ctcgtgcgcc cacgcctgcc ggatccgcgc gaggatgagc ggcacctgcg cgcccgctac
     2641 aaggcgctcg ggctgccgcg ggagcggatc atccgcgagc tcgagcgaca ccgtcgcgcg
     2701 gccgccggcg tatcggagcc cgcgggcggc tggcgggcgg cgctcgccgc cttcgtggcc
     2761 gagcacgcgc ggaatgccgg cccgacgctg ttccggctct cgttccattc gggggccgtc
     2821 attccgggcg agaccatccg gcggaccagt cgcacggtgg cggacgtgcg cgccgatccg
     2881 gaaggctggc tggaggaggg cccggcgatc ctcgtgttgc ggtgacatcg ctgtgtcact
     2941 ctgagcgcag cgaaggggac catgcttgat atggtcccct tcacttcgtt cagggtgaca
     3001 aaggacggct cggactcgcc accgccctcg atcgcctgac cttccttctc ggtagctttc
     3061 tggatggcct tgtcctccgc cgaccgcttc acggcgtcct tgagtcgctt gccgaactgg
     3121 gcctccccgg tggacggaag gccgccgagg gcgagcgtgg ccaggaggag tgcggggatc
     3181 actgacaggc ggggacgcat ggacatagaa tcctcggacg gggaacgacc gcctgcgggg
     3241 cggagggtct ggtgatgaag cgattcgggg ggtggagtgc gacggcgcgg gccgaagatg
     3301 ccggcccgcc cacccccgcg cgagcgtacc agggtaagac gttcgaaggg gccggtggac
     3361 tctcgctttt ccggcaggcc tggcggcccg acgggccttc tcgggccgtc ctggtcaaca
     3421 tccacggcct cggcgaccac tccggcctgt accccacgct ggtcgagcac tgcaccggcc
     3481 gggcgatcac cgtgcacgcc atggatctgc ggggcaacgg ccgctcggat gggcagcggg
     3541 cgtacgtcga gcgctgggag gaataccggg aggacctgcg ccgcttcatc gggctggtcc
     3601 gggaggaaga gggcgaccgg ccggtcttcc tgctggggaa cagcctgggc ggcctgatcg
     3661 tcctggatta cgcgctgcac caccccgagg gtctgcgggg cgtcatcgcg gcctcgccgc
     3721 cgctgggacg cctcgccgtg cccgctcccc tgctggccct gggtcgggtg ttctcccggg
     3781 tgtggccccg cttctcgctg cgcaccggca tggacctgtc ggggctcgcg cgagacccgg
     3841 tggtggtgca gaccgtcctg gccgacccgc tcttccaccg ggtgggcacc gcgaggctct
     3901 cgaccgaggt ggtcgccgcg atcgcgcggg tacgggccgc cgccccccgc ttttccctgc
     3961 cgctgctcgt gctccacggg tcggcggatc ggatggtccc gcccgaaggg agccgcgaat
     4021 tcgtggcgcg cgtcggccat cccgaccggc agctgcggga gtacgcgggc gcgtttcacg
     4081 ttctcttcgc ggacctcgac cacgagcggg tgctggcgga cctcgagcga tggatcgagg
     4141 cgcacctctg accctgctct cgcgggccct tcggctccgc tgtccccact gcgggggcgg
     4201 gccgatcttc gtcgcctggt cgcggctggt gcccaactgt cc
//
LOCUS       DASUYN010000029         2456 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_671355, whole genome shotgun sequence.
ACCESSION   DASUYN010000029 DASUYN010000000
VERSION     DASUYN010000029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2456)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2456)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2456
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_671355"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            290..1369
                     /locus_tag="VF061_00595"
     CDS             290..1369
                     /locus_tag="VF061_00595"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF021535.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HEX6668020.1"
                     /translation="MIFLIVVATIFAGYGTAYLASDDVRYVTRAGFEEIRILQNREPI
                     AELVSDRTTDPAVRHALRLVLESRDYAADLGLEAKETYTTYSDVGRDTLLLVLQAAPR
                     DCICPYTWKYPIVGRIPYKGFFDFGAARREADRLAARGYDVYLRPSAAFSTLGWFNDP
                     LLSTALTRDSVELAATVFHEIAHNTLYVKSATPFNESFAQFVGYRSAESFFAGRSDTA
                     NARQAANRLHDEMVLGEFYAELIARLDTLYATKPDSAALESGRAEAGAWARAQLQGPV
                     GARLRSYRLGNLPERPINNARLIGATLYRTRLDLFDRWFDRHGRDVRGSVQGLEGLIR
                     GVEGDTAYARLERAVAGMGDSTMSP"
     gene            complement(1436..1840)
                     /locus_tag="VF061_00600"
     CDS             complement(1436..1840)
                     /locus_tag="VF061_00600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668021.1"
                     /translation="MQQLPGKRVLALVAALAVATAGSAFAQDTTDTGQARFDTTEAGA
                     GAIDTTALDTASDTTGIDRAVTDTSDVPDTSAVGDTSDTSGVQNPPGYRGMERETTIF
                     PAEGAPPAGHDTTHQSGAGVGDTTAQTPDSVQ"
     gene            2036..>2456
                     /locus_tag="VF061_00605"
     CDS             2036..>2456
                     /locus_tag="VF061_00605"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX6668022.1"
                     /translation="MDSAFVDREQPRLLQELTDFLSIPSVSTLSANDADTRRAADWLR
                     TELTRLGCPVVDLIEGAGHPVVWAEGPAVPGRPTLLIYGHYDVQPPDPLEEWESPPFV
                     PTVREGKLYARGAADDKGQVYCLLKAYEAVLGEDGRPP"
BASE COUNT          342 a          873 c          848 g          393 t
ORIGIN      
        1 ggccaccatg aggacgtccc cggaccgctg ctcctgggcg accaccggca ccagcccatc
       61 gggaccgaac cgcaccgccg acagccagtt gttctcggac acgaggagaa gctaccggca
      121 gggtgggcga ttgtcaaaac cccttgtcgt ttcttatctt gtccacctct tgcccttccg
      181 gatcccaccg cctcggagcc cgtccggtga cccgttccgc ccccggtttc ccgccccccg
      241 cgccccccgc cggcgccctc gggccgtccc ctcgttcccg gtgaagggca tgatctttct
      301 cattgtggtc gccaccatct tcgcgggcta cggcaccgcg tatctggcca gcgacgacgt
      361 ccggtacgtc acccgcgcgg gattcgagga gatccggatc ctgcagaatc gcgagccgat
      421 cgccgagctg gtgagcgacc ggaccaccga cccggcggtg cggcacgccc tgcggctggt
      481 gctggagagc cgtgactacg cggcggacct ggggctcgag gcgaaggaga cctacaccac
      541 ctactcggac gtgggacgcg acacgctgct cctggtgctt caggccgcgc ccagggactg
      601 tatctgcccc tacacctgga agtaccccat cgtcggccgg attccctaca aggggttctt
      661 cgacttcggg gcggcgcggc gcgaggccga tcggctcgcg gcccggggct acgacgtcta
      721 cctccgcccc tcggcggcgt tctccaccct gggctggttc aacgacccgc tgctctcgac
      781 cgccctcacc cgggactcgg tggagctggc cgcgaccgtc ttccacgaga tcgcgcacaa
      841 cacgctctac gtgaagagcg ccacgccgtt caacgagagc ttcgcgcagt tcgtcggcta
      901 ccgctcggcc gagtcgttct tcgccggccg ctcggacacg gcgaacgcgc ggcaggcggc
      961 gaaccggctg cacgacgaga tggtgctggg tgagttctac gccgagctga tcgcccggct
     1021 cgacacgctg tacgcgacga agcccgactc cgcggcactg gagtccggcc gggccgaggc
     1081 gggcgcgtgg gctcgggcgc agctccaggg cccggtgggc gcccggctgc ggagctatcg
     1141 cctggggaat ctgcccgagc gcccgatcaa caacgcgcgg ctcatcggcg ccactctcta
     1201 ccgcacgagg ctggacctgt tcgaccgctg gttcgaccgg cacgggaggg atgtgcgggg
     1261 aagcgtgcag ggcctggagg gcctgatccg cggggtcgaa ggggatacgg cgtacgcgcg
     1321 gctggagcga gccgtggctg ggatggggga cagcaccatg tcaccctgag cgcagcgaag
     1381 gggaccatat cgagcctggt cccctttcac tgcgctcagc gtgatggggg ggaacctact
     1441 gcacgctgtc cggcgtctgt gcggtcgtgt cccccacccc cgcaccggat tgatgggtgg
     1501 tgtcgtggcc cgcgggaggc gccccctcgg cgggaaatat ggtggtctcc cgctccatcc
     1561 cccggtagcc cggcggattc tgcaccccgg acgtgtcgct ggtgtccccc accgccgagg
     1621 tatcgggcac gtccgacgtg tcggtcacgg ccctgtcgat cccggtcgtg tccgaggccg
     1681 tgtccaatgc ggtcgtgtcg atcgcgccgg cgcccgcctc ggtcgtgtcg aaccgcgcct
     1741 ggccggtatc ggtggtgtcc tgcgcgaagg ctgagcccgc ggtcgcgacc gcgagggcgg
     1801 cgacgagggc caggacacgc ttgcctggaa gctgctgcat cgttcctcca ctgctctgag
     1861 tacacgcgcc gcgctcggcg ctggttccgg gggaccaaga gtagtccgag gctagggccg
     1921 cgggccatga tgtcgccgtg agttggctca cgcccgccct cgcgccggac gccccgcgac
     1981 gtatactttt ctgccgtcgt gccactgctg gggaccgcaa cctggatgcg tcaccatgga
     2041 ttccgccttc gtcgatcgcg agcagccgag gctgctccag gagctcaccg acttcctctc
     2101 cattccgagc gtgagcacac tgtcggccaa tgacgccgac acccgtcgcg cggcggactg
     2161 gctgcgcacg gagctgaccc gcctcggctg ccccgtggtg gacctgatcg agggggcggg
     2221 gcaccccgtg gtgtgggccg aagggcccgc cgtgccgggg cgacccacgc tgctgatcta
     2281 tggtcactat gacgtgcagc cccccgatcc gctggaggag tgggagtcac cgccgttcgt
     2341 ccccaccgtg cgggagggca agctgtacgc gcggggcgcg gcggacgaca aggggcaggt
     2401 gtactgcctg ctcaaggcct acgaggcggt gctgggcgag gacggacgtc ccccgc
//
LOCUS       DASUYN010000030         2190 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1332595, whole genome shotgun sequence.
ACCESSION   DASUYN010000030 DASUYN010000000
VERSION     DASUYN010000030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2190)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2190)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2190
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1332595"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(119..1144)
                     /locus_tag="VF061_00610"
     CDS             complement(119..1144)
                     /locus_tag="VF061_00610"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEX6668023.1"
                     /translation="MRVLVTGGTGFTGTALVRRLVGAGHQVVALDYKDGLECDALRAL
                     GAEVILGSVTDRAAVQRSMQGVEFVFHLAAAFRELNVPNSFYDDVNVNGSRIVMEEAI
                     RAGVWKFVYCSTCGVHGNVDHPPANEDAPIQPADYYQRTKYEAEPLMKQLAAGKMEVV
                     ILRPAAIYGPGDPERFFMIFKRVARGTFPMFGSGRTLYHPLYIDNLVDAFMLCLARGV
                     GNGREYLIADEHYYPIEEIVKAVGRALDVQVRIPHYPVWPVVAVGHVVEKACKPFGIT
                     PPIFPRRVDWYRQNRAFDISRAKRELGYAPRIALDEGLRRTGRWYRERGYLRMEEAGD
                     LAEVSPA"
     gene            complement(1526..>2190)
                     /locus_tag="VF061_00615"
     CDS             complement(1526..>2190)
                     /locus_tag="VF061_00615"
                     /inference="COORDINATES: protein motif:HMM:NF021759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SprT-like domain-containing protein"
                     /protein_id="HEX6668024.1"
                     /translation="ARLYLLGLHGVSRVVTHTNRTVMVSIGKRRVLRIHAGYAHASDS
                     VLRAIIHFLDPRLPRAVRRAAELELLAFPVEQYASSGPPRYRQERPRPGDLLALHRLS
                     RAFDRFNREHFGGQLSTIPIRLSGRMRTRLGELSVDLRTGQPIEIAISRRHIARHRWE
                     EVEHTLLHEMVHQWQAESRLPVDHGPLFREKARQVGVVPGAKRAPVMSGGAGRRSPPS
                     AS"
BASE COUNT          323 a          761 c          759 g          347 t
ORIGIN      
        1 gccggctcac ccgctgccgg ccgtccgccg gctctcctcg cagggcgccg ccgcctgaac
       61 gacgcagggc cgcgctgcca tgcagcgcgg cccttttgga gtttcgtcgc agggctggtt
      121 atgccgggga aacctcggcc aggtcgcccg cctcctccat ccggagatag ccccgctcgc
      181 ggtaccaccg gccggtgcgc cgcagaccct cgtccagcgc gatgcgcgga gcgtagccca
      241 gctcccgctt ggcgcggctg atgtcgaacg cgcggttctg ccggtaccag tccaccctcc
      301 gggggaagat cggcggagtg atgccgaacg gcttgcaggc tttctccacg acgtgcccca
      361 cggccacgac cggccagacc gggtagtgcg ggatgcgcac ctggacgtcg agggcgcggc
      421 ccaccgcctt cacgatttcc tcgatcgggt agtagtgctc gtcggcgatg agatactcgc
      481 ggccgttacc cactcccctc gccaggcaga gcatgaaggc gtccaccagg ttgtcgatgt
      541 agagcggatg gtagagcgtc cggccgctgc cgaacatcgg gaacgtgccg cgcgcgaccc
      601 gcttgaagat catgaagaaa cgctcggggt cgcccggacc gtagatcgcc gcgggacgca
      661 ggatcacgac ttccatcttg cccgccgcca gctgcttcat cagcggctcg gcctcgtact
      721 tggtgcgctg gtagtagtcg gccggctgaa tcggcgcgtc ctcgttggcc ggcgggtggt
      781 ccacgttgcc gtgcaccccg caggtgctgc agtagacgaa cttccacacg ccggcgcgga
      841 tcgcctcctc catcacgatc cggctgccgt tcacgttgac gtcgtcatag aaggagttgg
      901 ggacgttgag ctcgcggaag gcggcggcga ggtggaacac gaattccacc ccctgcatgc
      961 tgcgctgcac cgcggcacgg tcggtgacgg accccaggat cacctcggcg cccaacgcgc
     1021 gcagggcgtc gcactccagg ccgtccttgt agtccagcgc cacgacctgg tgacccgcgc
     1081 cgacgaggcg gcggaccagc gccgtaccgg tgaaccctgt cccgcccgtg acgaggaccc
     1141 gcatgctcac tccttgattg ttgtcgaaca cctggacgcc gcccggcgcc ggtgatcttc
     1201 aggtgaggcc gatcctagcc tgtggcgtgc cccagggtgg tgatcgaagc agggcctcct
     1261 cctacaaaaa ccatgcccct gaggcacttc cgcaccgcgc tggcgccaca tggagttgcc
     1321 ggcggacgtc aggctgccgg acgtgcagac tgtcgcagtg gcgcgtcagg ctgcttccgc
     1381 cgcgctgcgt acacaaatga gacggttctc tgctggggcg ttgggccccg ggcgttttgg
     1441 taggccgtca ggatacgtct ttaccggtcc caacaccagg gggatgacta cgactggggt
     1501 tcaagggctc gaggacccgc ggagactagc tcgcgctcgg cgggctcctc cggccggccc
     1561 caccgctcat cacgggcgcc cgcttcgcgc ccggcaccac gcccacctgc cgcgccttct
     1621 cccggaagag cggcccgtgg tccaccggca ggcggctctc cgcctgccac tggtgcacca
     1681 tctcatgcag cagcgtgtgc tccacctctt cccaccggtg gcgcgcgatg tggcggcggc
     1741 tgatggcgat ctcgatcggc tggccggtgc ggaggtccac gctcagctcg ccgagccggg
     1801 tgcgcatccg gccggagagt cggatcggga tggtggacag ttggccgccg aaatgctcgc
     1861 ggttgaagcg atcgaaggcc cggctgagcc gatgcagcgc caggaggtcc ccgggccggg
     1921 gacgctcctg acggtaccgg ggaggtccgc tcgaggcgta ttgctcgacc gggaaggcga
     1981 gcagctcgag ctccgcagcc cgccggacgg cgcgggggag cctcgggtcg aggaagtgga
     2041 tgatggcccg gagcacgctg tccgaggcgt gcgcgtagcc tgcgtggatc cggagcaccc
     2101 gccgcttgcc gatgctcacc atcacggtgc ggttggtgtg ggtgacgacc cgcgagacgc
     2161 cgtgcaggcc gagcaggtag aggcgcgccg
//
LOCUS       DASUYN010000031         2165 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1773548, whole genome shotgun sequence.
ACCESSION   DASUYN010000031 DASUYN010000000
VERSION     DASUYN010000031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2165)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2165)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2165
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1773548"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(122..>2165)
                     /locus_tag="VF061_00620"
     CDS             complement(122..>2165)
                     /locus_tag="VF061_00620"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX6668025.1"
                     /translation="LPGRPTVVLLSDGLWRRRFGADPRVVGRTLILDDLPTTVIGVMP
                     PGFQLPAHYVGAGMEAWTLLQLDPAADRSERGWHWLSVVARLRPGVDRTSAGQEVAGI
                     MAGMLQEHPTEYDEAFSGSLTPAAEQLVGDIRPVLLVLLGAVALLLLIAASNVASLFL
                     ARAEERHREIAVRAALGARAGRIVRQLLTESAVLAVAGGVAGLILAAYGTRALVAAAP
                     PTLPRLDAIRLDIPVLLFTALVSIATGLLFGLAPAWYAARPDLSRALTDGGRSGSAGA
                     RRQRFRRGLVVTQIALALVLVVAAGLLIRSFERMRGVDPGFAPEGLLTAQVELSPVRY
                     ESNESIRAFYERLVARAEAIPGVRSAAIVKALPMTQLELGDWSFLREGRFSLPPQQED
                     WNLAYWQAVGPGYFETMRMPVLQGRGIGAGDRAGAPGVAVVNRTLARQAWPGEDAMGQ
                     RLLMGGGATDSVWRTVVGIVGDVRHRGLDAEPRPEIYLPHAQFPAGTGTPLRTMRVVL
                     RARGDPDALAAPLRAALAELDPDIPLTAVQTMEDALGVWAAERRLTMLVVAGFALLAL
                     ALGAVGVYGVMAHLVTQRTREIGIRIALGAVPREILGLVLSQGVRLALLGVAAGLLVA
                     LGVSRLLTRLLFEIEPTDMPTFVATALGLALVAVAASLIPAVRAVRTDPVDALRSE"
BASE COUNT          316 a          813 c          812 g          224 t
ORIGIN      
        1 gtgaagatcg tggtcgtcgc gccgatgccc agcgcgagcg cggagacggc ggcgaaggtg
       61 aagccggggg tgcggcggag ggcccgcagg gcgtaccgca agtcgtggcc gagagtgctc
      121 atcattcgct ccggagggcg tccaccggat cggtccgcac cgcgcggacc gccggaatca
      181 gcgaggccgc caccgccacg agggccagcc ccagtgcggt ggccacgaag gtgggcatgt
      241 cggtgggctc gatctcgaac agcagccggg tgagcaggcg gctgacgccc agcgcgacca
      301 gcagcccggc cgcgacgccg agcagcgcca gccggacgcc ctgcgagagc accagaccca
      361 ggatctcgcg cggcaccgcg ccgagtgcga tgcggatccc gatctcgcgg gtgcgctggg
      421 tgacgaggtg ggccatgacc ccgtacaccc cgaccgcgcc gagcgcgagt gccagcaggg
      481 cgaagcccgc gaccacgagc atcgtgagtc ggcgctccgc ggcccacacg ccgagcgcgt
      541 cctccatggt ctgcaccgcc gtgagcggga tatcggggtc cagctccgcc agggcggcgc
      601 ggaggggcgc ggcgagcgcg tcggggtcac cccgggcgcg caggaccacc cgcatggtgc
      661 gcaggggcgt gccggtgccg gcggggaact gcgcgtgcgg caggtagatc tccgggcgcg
      721 gctcggcgtc gagtccccgg tgccgcacgt cgcccacgat ccccacgacc gtgcgccaga
      781 ccgagtcggt ggcgccgccg cccatgagga gccgctgccc catcgcgtcc tcgccgggcc
      841 aggcctgccg cgcgagcgtc cggttgacca ccgcgacgcc gggcgcgccg gcgcgatctc
      901 ccgccccgat gccccgcccc tggagcaccg gcatccgcat ggtctcgaaa taccccggcc
      961 ccaccgcctg ccagtaggcc aggttccagt cctcctgctg gggcggcagg gagaaccgcc
     1021 cctcccgcag aaacgaccag tcgcccagct cgagctgcgt catcggcagc gccttcacga
     1081 tggccgcgga gcgcacgccg gggatggcct ccgcccgggc caccagccgc tcgtagaagg
     1141 cgcggatcga ctcgttgctc tcgtaccgga ccggcgacag ctccacctgg gcggtgagca
     1201 gaccctccgg cgcgaagccg ggatccaccc cccgcatccg ctcgaagctc cggatcagga
     1261 gccccgccgc gaccaccagc acgagcgcca gagcgatctg ggtgacgacc agccctcggc
     1321 ggaaccgctg acgcctcgcg cccgcgctcc cgctccggcc gccgtcggtc agcgcccggg
     1381 agagatcggg cctggcggcg taccacgccg gcgcgaggcc gaacaggagg ccggtggcga
     1441 tgctgacgag ggcggtgaag agcagcaccg ggatgtcgag ccggatggcg tccagccgcg
     1501 gcagcgtcgg cggcgccgcc gccaccagcg cccgggtgcc gtaggccgcg aggatgaggc
     1561 ctgcgacgcc gcccgcgacc gcgaggaccg cgctctcggt cagcagctgg cgcacgatcc
     1621 ggccggcgcg ggcgccgagg gcggcgcgca ccgcgatctc ccggtggcgc tcctcggccc
     1681 gggccagaaa gagcgaggcc acgttggagg cggcgatcag cagcagcagg gcgacggcgc
     1741 cgaggagcac cagcaggacc gggcggatgt cgcccaccag ctgctccgcg gccggggtga
     1801 gcgagccgct gaaggcctcg tcgtactcgg tgggatgttc ctgaagcatg ccggccatga
     1861 tgccggcgac ctcctgcccg gcgctggtcc ggtccacgcc gggccgcagc cgggccacga
     1921 cggagagcca gtgccagccc cgctcgctcc ggtccgcggc gggatcgagc tggagcagcg
     1981 tccaggcctc catcccggcg ccgacgtagt gggcggggag ctggaaaccc ggcggcatga
     2041 cgccgatcac cgtggtcggg aggtcgtcca ggatcagggt gcgtcccacg acccgcggat
     2101 cggcgccgaa gcgccgccgc cacagtccgt cgctcagcag cacgaccgtc ggccgcccgg
     2161 gcagg
//
LOCUS       DASUYN010000032         6297 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_451704, whole genome shotgun sequence.
ACCESSION   DASUYN010000032 DASUYN010000000
VERSION     DASUYN010000032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6297)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6297)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6297
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_451704"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(55..528)
                     /locus_tag="VF061_00625"
     CDS             complement(55..528)
                     /locus_tag="VF061_00625"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEX6668026.1"
                     /translation="MAENRNVSAGLLLFRRPAGGLELFLAHPGGPFWRGRDLGAWTIP
                     KGLVAPGEELLAAARREFEEETGIVSREPYLPLGSVRQKAGKVIHAWAWQGDADPAAI
                     VSNTTRYEWPRGSGRWLTYPEVDRCAWFAPDAARERLNPAQAELIDRLEAALASG"
     gene            complement(593..769)
                     /locus_tag="VF061_00630"
     CDS             complement(593..769)
                     /locus_tag="VF061_00630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668027.1"
                     /translation="MTKREDQRIAALARKNAAKVKPPRQDQASDFDPTLRKRAPEQDA
                     ETKRLFKEMKRREF"
     gene            complement(766..1995)
                     /locus_tag="VF061_00635"
     CDS             complement(766..1995)
                     /locus_tag="VF061_00635"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX6668028.1"
                     /translation="MPEVAAAELPVRLQPVLPLAEALGGGNGRLERPFPLDQPRLLLT
                     FSGTAALHQAFRSLNLPRGSTVLCPSYNCGHEIEPLVRQGLRVRCYRVGRDLQADLDD
                     VERRVDASVRALMVTHYFGFAQPLPELRALCDRHGIRLIEDCAHALLSDDSYGTMGRV
                     GDVSVYSMRKTLPLPHGGAVLFNDPALAAPVRLAPPPALSTWLKALALARKAAVDRAR
                     TRRSGLDLLALAAMAPLVAGSQLLERVYPGSATACYDPDDDDFGFDSAVLGWGMAPYC
                     EGLLDRLDWRPLAERRRHHYRVLADGLREIAGCELPLPEAESHTCPLFLPVLVDRRTE
                     VFHHLIRERVYAAVWWDQRHPAVDWSEFPEAVDLKERVLALPVHQDMDDEQLARVLAV
                     LRGCPALRPSTPLVETR"
     gene            complement(1988..3703)
                     /locus_tag="VF061_00640"
     CDS             complement(1988..3703)
                     /locus_tag="VF061_00640"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX6668029.1"
                     /translation="MIHVRELQPDDAPAIAAIESRYHQVLADGAEGHRRYLTGALAAG
                     VNLSFGLFDDDRLVGYVLCYGFGPTIFPGETGEALYVEDIAVLPRYRRQVARLIRRLF
                     GDARRHFPGSALEAHSVESVFRVWRDHPAIFAASGYAITRDADSGEMLKGEIRYLIRW
                     QPIPDWDPPVPTARELIARRGHPVEVDGLRYEVRVVKDEREWEALAEPWDRLLLAVPG
                     HTVFQTYEYQRLWWRHFGGDAELFIVVLSREGEIHGIAPLQIETVKEYGRWLRRLGFI
                     GSRWEVDRPRLLFPAGEGPLTRALVAFLAARRDRWDFCDFHEQPTGSEGLAALESAFR
                     AAGYLVGRTRDSDCAYLVLEGTWDGFLAKKSQTFRKNIKAAGRRLRAAGELEYRVYDA
                     LPDVVEQLEVYRAIEARSWKSGEGVGISRDGDYFEFYREMAERFAKRRGFVIRILSVG
                     GRPVAGTFGLSHEGVFYSLQIAHDAEFSRSSPGTYLEALEMEQCFRGGLREYEFLGGF
                     LNNKSRWTSTFRFTTQLHVFRRTPFFLALHAVVFGLKPRIKALVRPYMRSWRKPVTGG
                     GADDA"
     gene            complement(3700..5211)
                     /locus_tag="VF061_00645"
     CDS             complement(3700..5211)
                     /locus_tag="VF061_00645"
                     /inference="COORDINATES: protein motif:HMM:NF024832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HEX6668030.1"
                     /translation="MSTLRALTRNISWNYVQAGTSLIVAFLLTPIVLEHLGEVGFGVW
                     VLLKALLFYLAFLDLGFYNALVKYVAEDAERNDWRALNGLLRTVTSVLALAGLGALAL
                     SLVIAWLVVPHAFDIPAGHLGELRVATVLLGVDLLIAFPTSVLAAVLEGRQRFDILSG
                     VTVVATVLLAAATVVGLRLGYGILALVGIEILGTLLTTLSYALLLRRLYPEIRPGFGP
                     LAGEHLRRIRGYSTWTSLNEILAEGSTEVEKLLIPVLLSVSLLTPYALICTVAAAIFL
                     AVEPITDTFFPLSSAYDAKDDRVRLRALLIRGTKLVMAISLPIAVVAAAYGEPFILAW
                     IGPERGAVPGGVMPLVVASFTVTAFIMTGTTILLALARVREVFWMGIAELALAVALVL
                     LTVPRYRLVGLAGSLLAANLLVTFLWIVPAVSRLLGQPVSDFLFQSLLRPLAAAVPMA
                     VFIAWMECRLPGLALWEIASKAGFAGCVYLAAFYLVSLTPEERALCSASLRNR"
     gene            5546..5866
                     /locus_tag="VF061_00650"
     CDS             5546..5866
                     /locus_tag="VF061_00650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668031.1"
                     /translation="MSEPAPEQHSSRRSPSTAATVGIPPGHLPPPGKCRVWMPGEPPG
                     HQAKSRSCSNIERTAPAGSWIVERPGRDKKVVHVRVVDERRPGVVVRLRVYELRDGKL
                     VRQG"
     gene            6054..>6297
                     /locus_tag="VF061_00655"
     CDS             6054..>6297
                     /locus_tag="VF061_00655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668032.1"
                     /translation="MTVALHAACGGGGGGGLTEPTTGSLAVVTNTTGTELDTDGYMLT
                     VDGVENGVIGPAAARTVAELEPGPHQIGLAGLAANCG"
BASE COUNT          978 a         2227 c         2271 g          821 t
ORIGIN      
        1 ctcctggcgt tcggccggcc aagccggccg tcccatcgca ggatagccgc aacgtcagcc
       61 cgacgcgagc gccgcctcga gccgatcgat cagctcggcc tgggcggggt tgagtcgctc
      121 gcgcgcggcg tccggggcga accaggcgca gcggtccacc tcggggtagg tgagccagcg
      181 ccccgagccg cggggccact cgtagcgggt ggtgttgctg acgatggcgg ccggatcggc
      241 gtcgccctgc caggcccagg cgtggatcac cttgcccgcc ttctgccgca ccgagccgag
      301 ggggaggtac ggctcgcgcg acacgatgcc ggtctcctcc tcgaactccc gccgcgccgc
      361 ggcgagcagc tcctcgcccg gagccacgag acccttgggg atggtccacg caccgaggtc
      421 gcgcccccgc cagaagggcc cgcccggatg cgcgaggaac agctcgaggc cgccggcggg
      481 ccgtcgaaag agcaggagac cggcgctgac gttgcgattc tccgccatca gcgatctgct
      541 tctcctccat cgtccgatga gatggggtgc gggcctggcc ggccgtgagg gatcaaaact
      601 cccggcgctt catctccttg aacagccgct tggtctcggc atcctgctcg ggcgcccgct
      661 tccgcagggt gggatcgaag tccgacgcct ggtcctgccg cggcggcttc accttggcgg
      721 cgttcttcct ggccagagcg gcgatccgct ggtcctcacg tttggtcatc tggtctccac
      781 gagcggggtt gacggccgta gtgccgggca gccgcgcagg accgcgagaa cccgcgccag
      841 ctgctcgtcg tccatatcct ggtgcaccgg cagggccagc acgcgttcct tgaggtccac
      901 cgcctccggg aactcgctcc agtccaccgc cgggtggcgc tggtcccacc acaccgccgc
      961 gtagacccgc tcgcggatca ggtggtggaa gacctccgtc cgacgatcca ccagcaccgg
     1021 gaggaagagc ggacaggtgt ggctctccgc ctcgggcagc ggcagctcgc agccggcgat
     1081 ctcccggagc ccatcggcga gcacccggta gtggtgtcgc cggcgctcgg cgagcgggcg
     1141 ccagtcgagc cgatcgagca gtccctcgca gtagggagcc atgccccagc ccaggaccgc
     1201 cgagtcgaag ccgaaatcgt cgtcgtcagg atcgtaacac gccgtcgccg atccgggata
     1261 gacccgctcc aggagctggc tcccggcgac caggggagcc atcgccgcca gggcgaggag
     1321 gtccagcccc gagcggcgcg tccgcgcccg gtccaccgcc gccttccggg cgagcgccag
     1381 cgccttgagc cacgtggaga gcgccggcgg cggcgcgagc cggacggggg cggcgagggc
     1441 cggatcgttg aacagcaccg cgccgccgtg gggaaggggc agcgtcttcc gcatgctgta
     1501 gaccgatacg tcgccgaccc ggcccatcgt accgtagctg tcgtcgctca ggagcgcgtg
     1561 ggcgcagtcc tcgatcagcc ggatgccgtg ccggtcgcag agcgcgcgga gctccggcag
     1621 cggctgggcg aagccgaagt agtgggtgac catcagcgcg cgtaccgagg cgtccacccg
     1681 gcgctccacg tcatccaggt ccgcctggag atcgcggccc acccggtagc agcgcacccg
     1741 caggccctgc cgcaccaggg gctcgatctc gtgaccgcag ttgtagctgg gacacagcac
     1801 cgtcgagccg cggggcagat tcaggctgcg gaacgcctgg tgcagggcgg cggtgccgga
     1861 gaaggtgagc aggaggcgcg gctggtcgag cgggaagggc cgctccagcc gtccgtttcc
     1921 cccgccgagc gcctcggcga gcggcagcac cggttggagg cgcaccggca gctccgcggc
     1981 cgccacctca ggcatcgtcg gcccctcccc cggtcaccgg cttgcgccac gagcgcatgt
     2041 aggggcgcac cagcgccttg atccggggct tgagcccgaa gaccaccgcg tgcagcgcca
     2101 ggaagaacgg cgtgcgccgg aacacgtgga gctgggtggt gaagcggaag gtggaggtcc
     2161 agcgcgactt gttgttgaga aagccgccca ggaactcgta ctcccggagg ccgccgcgga
     2221 agcactgctc catctccagc gcctccaggt aggtgcccgg cgagctccgg ctgaattccg
     2281 cgtcatgggc gatctgcagc gagtagaaca cgccctcgtg ggacagcccg aaggtgccgg
     2341 cgaccggcct gccgccgacg gacaggatcc ggatgacgaa cccccgccgc ttcgcgaacc
     2401 gctcggccat ctcgcggtag aactcgaagt agtcgccgtc ccgggagatg cccaccccct
     2461 ccccgctctt ccagctgcgg gcctcgatgg cccgatagac ctcgagctgc tccacgacgt
     2521 cgggcagcgc atcgtacacc cggtactcga gctcgcccgc cgcacgcagc ctgcgtcccg
     2581 ccgccttgat gttcttgcgg aaggtctggc tcttcttcgc caggaacccg tcccaggtgc
     2641 cttcgagcac gaggtacgca cagtcggagt cgcgggtgcg gcccacgaga tagccggcgg
     2701 cgcggaacgc gctctccagc gcggcgagcc cttcggagcc ggtgggctgc tcgtggaagt
     2761 cgcagaagtc ccaccggtcc cgccgcgcgg ccaggaaggc gaccagcgcg cgggtgagcg
     2821 gaccttcccc ggccgggaag aggagccggg ggcgatccac ttcccagcgc gagccgatga
     2881 acccgagccg cctgagccag cggccgtatt ccttcaccgt ctcgatctgc aggggcgcga
     2941 tgccgtggat ctcgccctcg cggctcagga ccacgatgaa cagctcggcg tcgccgccga
     3001 agtggcgcca ccagagccgc tggtactcgt aggtctggaa cacggtgtga cccggcaccg
     3061 cgagcaggag ccggtcccac ggctcggcca gcgcctccca ctcccgctcg tccttcacca
     3121 cccggacttc gtagcggagt ccgtccacct cgaccgggtg gccccgccgg gcgatcagct
     3181 cccgcgccgt gggcaccggc gggtcccagt cgggaatggg ctgccagcga atgaggtacc
     3241 ggatctcgcc cttcagcatc tcgccgctgt cggcgtcacg ggtgatggcg tagccggagg
     3301 ccgcgaagat cgccgggtga tcccgccaga cccggaagac gctctcgacc gagtgcgcct
     3361 ccagcgccga gccggggaag tgacgccgcg cgtcgccgaa cagccgccgg atgagccgcg
     3421 cgacctggcg gcgataccgc ggaaggacgg cgatgtcctc gacgtagagc gcctcgcccg
     3481 tctcgccggg gaagatggtc gggccgaagc cgtagcagag cacgtagccc accaggcgat
     3541 cgtcgtcgaa gagtccgaag ctgaggttca cgccggcggc cagcgcgccg gtgagatagc
     3601 ggcggtggcc ctccgcaccg tcggccagca cctggtggta tcgcgactcg atggcggcga
     3661 tcgcgggggc gtcgtcgggc tgaagctcgc ggacgtggat catcggttgc gcaggctcgc
     3721 ggagcagagc gcgcgctcct cgggtgtgag cgagacgagg tagaaggcgg ccaggtagac
     3781 gcagccggcg aatccggcct tgctcgcgat ctcccacagc gccaggccgg gcaggcggca
     3841 ttccatccag gcgatgaaca ccgccatggg caccgccgcc gccagcgggc gcagcaggct
     3901 ctggaagagg aagtcggaca ccggctgccc cagcagccgg ctcacggcag gcacgatcca
     3961 caggaaggtg accagcaggt tggcggcgag caggctgccg gcgagaccca ccagccggta
     4021 gcggggaacc gtcagcagca ccagggcgac ggcgagcgcc agctcggcga tgcccatcca
     4081 gaagacctcc cgcacccggg cgagcgcgag caggatcgtc gtcccggtca tgatgaaggc
     4141 ggtgaccgtg aagctcgcca ccaccagcgg catcactccc ccgggcaccg cgccgcgctc
     4201 cggcccgatc caggcgagga tgaacggctc cccgtaagcg gccgccacca ccgcgatggg
     4261 caggctgatc gccatcacca gcttggtgcc gcggatgagg agcgcccgga gccggacccg
     4321 gtcgtccttc gcgtcgtagg ccgaggagag cggaaagaag gtgtcggtga tcggctcgac
     4381 cgccaggaag atcgcggcgg ccacggtgca gatcagggcg tacggggtca gcagggagac
     4441 cgagagcagg accggaatca ggagcttctc cacctccgtg ctcccctccg cgaggatctc
     4501 gttgagcgag gtccaggtgc tgtagccgcg aatccgccgc aggtgctcgc ccgcgagcgg
     4561 accgaagccg ggtcggattt ccgggtagag gcgccggagc agcagggcgt acgacagggt
     4621 ggtgagcagg gtcccgagga tctcgatgcc gaccagggcg agaatcccgt agcccagccg
     4681 gaggcccacg acggtggcgg cggcgagcag cacggtcgcg acgaccgtga ccccgctgag
     4741 gatgtcgaag cgttgccggc cctcgagcac cgcggcgagc accgaggtcg ggaaggcgat
     4801 cagcaggtcc acgccgagga gcaccgtggc gacgcggagc tccccgaggt gcccggcagg
     4861 gatgtcgaag gcgtggggta ccaccagcca ggcgatcacg aggctgagcg cgagggcgcc
     4921 gagacccgcg agggccagca cgctggtcac ggtccgcagc agtccgttca gcgcccgcca
     4981 gtcgttccgc tcggcatcct cggcgacgta cttcaccagg gcgttgtaga agccgaggtc
     5041 gaggaaggcg agatagaaca gcagggcctt gagcaggacc cacacgccga agccgacctc
     5101 gcccaggtgc tcgaggacga tcggcgtgag caggaaggcc acgatcaggc tggtgccggc
     5161 ctgaacgtag ttccaggaga tgtttcgggt cagcgctcgc agggtgctca cggccgcgcg
     5221 tgctgcaagt gcggacgccc gcgtgcgcgg cgcccggcgg cgcgatgcgg gttagggcgg
     5281 atcgggcgtg cgtgtgtcac gtgcttgcgc gataagaggt tgggtcgtgg ccgtccgacg
     5341 gcgggcgccg cgtcgggcgg gctcctgagc cggggcgggg ggcaagaagg acgccagcca
     5401 gagcccgccc gcccgaccgg gagggcacgc tccctgcctc actcctccca ggtcggtcct
     5461 tttccccgga ggagtcatgc gtttagccac gatggcggcc gcggccatgg catttatcgc
     5521 tgcagcggct tgcaagccga tccccgtgtc ggagccggcg cccgagcagc attcgtcccg
     5581 gcggagcccg agcacggccg cgaccgtcgg gattcccccg gggcacctgc cgcccccggg
     5641 caagtgccgc gtctggatgc cgggcgagcc ccccgggcac caggccaagt cccggagctg
     5701 ctcgaacatc gagcgaaccg ccccggcggg gagctggatc gtggagcgtc ccggccggga
     5761 caagaaggtg gtgcacgtgc gggtggtgga cgagcgccgg cccggcgtgg tcgtccgcct
     5821 gcgcgtgtac gagctccgcg acggcaagct ggtccgccag ggctgaacac ccgccgctcg
     5881 ccttgactac ccaggcatgc ctgggtagtc tgccctacct tcagtgcgcc tgaccggggt
     5941 cgtcgtcccc cacgacggcc cccactgcgt gccgcggccc acccgccgcc ctcaatccgc
     6001 cgatgctacc actccgtggg tcccgccgtt ccgggcgcag gctcttgctt gcggtgaccg
     6061 tcgcgctcca tgcggcctgt ggtggcggcg gtggcggcgg cctcaccgag cccacgaccg
     6121 gatccctcgc ggtcgtcacc aacaccaccg ggaccgagct cgacaccgac ggctacatgc
     6181 tgacggtgga cggggtggag aacggcgtca tcggccccgc ggccgcgcgg accgtcgccg
     6241 agctggagcc cggaccgcac cagatcggtc tcgcgggcct ggcggccaac tgcggag
//
LOCUS       DASUYN010000033         4123 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_892313, whole genome shotgun sequence.
ACCESSION   DASUYN010000033 DASUYN010000000
VERSION     DASUYN010000033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4123
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_892313"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..473)
                     /gene="mreD"
                     /locus_tag="VF061_00660"
     CDS             complement(<1..473)
                     /gene="mreD"
                     /locus_tag="VF061_00660"
                     /inference="COORDINATES: protein motif:HMM:TIGR03426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HEX6668033.1"
                     /translation="MSVSRANRVQLVLVMALLVLLHFYLRPRIWSARVSPDFLLIALV
                     FFAMRAGPGAGALAGFAVGVVNDALTPAAFGAGALAHTVVGYLAAWGRAVFFADNLLV
                     NAGFVAAGLWLRDLVLLLASGTDRGRLLVELTLYAPLQALTTALAALIVLAAFRE"
     gene            complement(470..1558)
                     /gene="mreC"
                     /locus_tag="VF061_00665"
     CDS             complement(470..1558)
                     /gene="mreC"
                     /locus_tag="VF061_00665"
                     /inference="COORDINATES: protein motif:HMM:NF016011.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005618 - cell wall [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HEX6668034.1"
                     /translation="MASASERSFTRRDTVTFLACLGLSLAALFSPEQWGHGISDALRN
                     SVLAPLVWLQARAEEGRTSRARLKAITVQRDSSAYLAQGIPSLMAENERLRQLLALSR
                     RLSTPYVAGEVLHQAQATDGRTLLVDVGRTDLVSEFDPVVAPEGLIGMVLTAGQHSSV
                     VMTWAHPEFRVAAYTVGGNASGVVAPSLSGRTGEGALEFRGVPYRDSVPAGTLVLSSG
                     LGGVYPKGIPVGTVTGVVREQAGWERVYRLLPAANPGAVAHVLVLVSSPGASMERAFP
                     SDSALLAERLDSIARVRQADSIAAAKAEAAQLAAAAKAAAAAKAAAARAAAAKTAPRP
                     APAAPTQAPTQAPTPAPPPAPAAGESVR"
     gene            complement(1562..2599)
                     /locus_tag="VF061_00670"
     CDS             complement(1562..2599)
                     /locus_tag="VF061_00670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018250722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000902 - cell morphogenesis [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HEX6668035.1"
                     /translation="MKLPPLNFTSWLPANEIAVDLGTANTLVYVKGEGIVLNEPSVVA
                     IEKATGKIKGIGLEAKRMLGRTPDGILAVRPLKDGVIADFDVTEKMLRYFLKTIIDKH
                     VFRVKPKVIVCVPSGITEVERRAVRDSAQTAGAKQVLMVAEPMAAAIGVGLPVETPTG
                     NMVIDIGGGTTEIAVIALSGIVSDTSIRTGGDELDQAIVQFMRKNYNLLVGEPTAEAI
                     KIKIGSAAPTGDEREMEVKGRDLVSGIPKTVRVHSTEIREAVQEPIQQIVDAVRRALE
                     ITPPELASDIVDRGIVMTGGGALIRGLDILLAQETGLPIHVDEDPLTCVVRGTGRILD
                     DYEKYRSVLSA"
     gene            complement(2673..3224)
                     /gene="dut"
                     /locus_tag="VF061_00675"
     CDS             complement(2673..3224)
                     /gene="dut"
                     /locus_tag="VF061_00675"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: protein motif:HMM:NF001862.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004170 - dUTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006226 - dUMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0046081 - dUTP catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HEX6668036.1"
                     /translation="MQSRSGIAAGAERGGGQGGLSRRGRGVPPSPGRRRFSPLIPVLL
                     TRLAHGEGLPLPSLGTPGSAGYDVASAEDGVLAPLERRAFATGFSMALPDDYECQIRT
                     RSGLALKHGVIVANTPATIDSDYRGEVKVILVNLGTEPFTVTRGMRIAQLVFARVERI
                     EFRQVAELPASTRGAGGFGSTGH"
     gene            complement(3107..>4123)
                     /gene="ald"
                     /locus_tag="VF061_00680"
     CDS             complement(3107..>4123)
                     /gene="ald"
                     /locus_tag="VF061_00680"
                     /EC_number="1.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000286 - alanine dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006522 - alanine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine dehydrogenase"
                     /protein_id="HEX6668037.1"
                     /translation="VFIEQGAGLGSGFPDAAYTAVGAKILPTAEEVWTQAEMIMKVKE
                     PIAPEWPRMRTGQVIYTYFHFAAADDLTRAVIDSGAIAVAYETVQLPSGELPLLTPMS
                     EVAGRMSVQEGAKYLEKVFGGSGILLGGVPGVAPGEVVIIGGGVVGINAAKMAAGLGA
                     HVTILDISLDRLRYLDDVLPANVDTAYSNRHNILDAIRRADLVIGAVLLPGAKAPHLV
                     KRADLKVMKPGSVIVDVAVDQGGCVETIKPTTHENPTYFVDGILHYAVANMPGGVPRT
                     STLALTNATLPYGLKLAKQGWRAACKADPALRLGLNVVEGRVVYPGVAEAFHLPLADV
                     GSLL"
BASE COUNT          636 a         1434 c         1464 g          589 t
ORIGIN      
        1 cactcgcgga aggcggcgag cacgatcagc gccgccagcg ccgtggtgag cgcctggagc
       61 ggggcgtaga gggtgagctc gaccagcagc cggccccggt ccgtgccgct cgccaggagc
      121 agcaccaggt cccgcagcca gagacccgcc gcgacgaagc cggcgttgac cagcaggttg
      181 tcggcgaaga agacggcgcg gccccaggcc gccaggtagc cgaccacggt gtgggccagc
      241 gcgccggcgc cgaacgcggc cggcgtgagc gcgtcgttca ccacgccgac cgcgaagccc
      301 gccagcgcgc ccgcgcccgg gcccgcgcgc atggcgaaga acaccagcgc gatgaggagg
      361 aagtcggggc tcacccgcgc ggaccagatc cgcgggcgga ggtagaagtg gagcaacacc
      421 aggagggcca tcaccagcac cagctggacc cggttggcgc gggagacgct catcgcacgg
      481 actctccggc cgcgggggcc ggcggtggcg ccggtgtcgg tgcctgggtc ggtgcctggg
      541 tcggcgcggc gggtgccggc cggggcgcgg tcttcgccgc ggccgccctc gccgcggccg
      601 ccttggccgc tgccgccgct ttcgcggccg ccgccagctg ggcggcctcg gccttcgcgg
      661 cggcgatgga gtccgcctgg cgcacccgcg cgatggaatc cagccgctcg gcgagcaggg
      721 ccgaatcgct ggggaacgcg cgctccatgc tggcgcctgg ggaggagacc agcacgagca
      781 cgtgcgcgac cgcgcccggg ttggccgccg gcaacagccg gtacacccgc tcccagcccg
      841 cctgttcccg caccaccccg gtcaccgtgc ccaccgggat ccccttgggg tagaccccac
      901 ccaggccgga cgagagtacg agggtgccgg cgggcaccga atcgcgatag ggcacgccgc
      961 ggaactccag cgcgccttca cccgtgcgac ccgagagcga gggggccacc accccgctcg
     1021 cgttgccgcc gacggtgtag gccgcgaccc ggaactccgg gtgggcccag gtcatgacca
     1081 cgctggagtg ctgcccggcg gtgagcacca tgccgatcag gccctcgggc gccacgaccg
     1141 ggtcgaactc ggagaccaga tcggtgcggc cgacatcgac cagcagggtg cgtccgtcgg
     1201 tggcctgcgc ctggtgcagc acttcgccgg ccacgtaggg cgtggagagc cggcggctca
     1261 gcgcgagcag ctggcggagc cgctcgttct cggccatgag cgaggggatg ccctgggcga
     1321 gataggcgga ggagtcgcgc tggacggtga tggccttcag gcgggcgcgg ctggtgcgac
     1381 cctcctcggc gcgagcctgg agccagacca ggggcgcgag gaccgagttg cgcagcgcgt
     1441 cggagatccc gtgcccccac tgctcgggag agaagagggc cgccagggac agccccagac
     1501 acgcgaggaa ggtgaccgtg tcccggcgcg tgaacgagcg ttccgacgca ctggccatgg
     1561 atcaggcgga caggacgctg cggtatttct cgtagtcgtc gagaatgcgt cccgtgccgc
     1621 ggacgacgca ggtcagcgga tcctcgtcca cgtggatggg gaggccggtc tcctgcgcca
     1681 ggaggatgtc gagcccgcgg atcagcgctc cgccgccggt catcacgatg ccgcggtcca
     1741 cgatgtcgct ggcgagctcg ggtggcgtga tctcgagcgc acgccgcacc gcgtccacga
     1801 tctgctggat cggctcctgc accgcctcgc ggatctcggt cgagtgcacc cgcacggtct
     1861 tgggaatgcc ggagacgagg tcgcggccct tcacctccat ctcgcgctcg tcgccggtgg
     1921 gtgccgcgga tccgatcttg atcttgatcg cctccgcggt cggctcaccg accagcaggt
     1981 tgtagttctt ccgcatgaac tgcacgatcg cctggtcgag ctcgtcgccg ccggtccgga
     2041 tcgaggtgtc ggagacgatg ccggagagcg cgatgaccgc gatctcggtg gtgccgccgc
     2101 cgatgtcgat caccatgttg ccggtggggg tctcgaccgg gagccccacg ccgatcgccg
     2161 cggccatcgg ctcggccacc atgaggacct gcttggcgcc ggcggtctgg gccgagtcgc
     2221 gcacggcgcg gcgctccacc tcggtgatgc cggacgggac gcagacgatg accttgggtt
     2281 tgacgcggaa gacgtgcttg tcgatgatgg tcttgaggaa atagcgcagc atcttctcgg
     2341 tgacgtcgaa gtcggcgatg acgccgtcct tcaggggccg caccgcgagg atgccgtcgg
     2401 gcgtgcggcc gagcatccgt ttggcctcca gcccgatgcc cttgatcttc ccggtggcct
     2461 tctcgatcgc gaccaccgac ggctcgttga ggacgatgcc ttcgcccttg acgtagacca
     2521 gcgtgttggc ggtgccgagg tccaccgcga tctcgttcgc agggagccac gacgtgaaat
     2581 tcagaggagg aagcttcatc gagaagatgt cggaagcatg gctgacaagg taacgaatgg
     2641 ccgtctccgc attcaaggga gtgaacgccc cgctaatgcc ccgtgctgcc gaaccctccc
     2701 gcgccgcggg tcgaggcggg caactccgcc acctggcgga actcgatccg ctcgacccgc
     2761 gcgaacacca gctgtgcgat ccgcatgccc cgggtcaccg tgaacggctc ggtgcccaga
     2821 ttcaccagga tgactttcac ctcaccccgg tagtcgctgt cgatcgtggc cggcgtgttg
     2881 gccacgatca cgccgtgctt cagagccagc ccggagcggg tccggatctg gcactcgtag
     2941 tcgtccggca acgccatcga gaagccggtg gcgaacgccc ggcgctccag tggcgccagc
     3001 accccgtcct cggcgctggc cacgtcgtaa ccggccgagc cgggggtgcc cagactgggc
     3061 aggggcagcc cctcgccgtg cgccaggcgg gtgagcagga cggggatcag aggagagaac
     3121 cgacgtcggc caggggaagg tggaacgcct cggccacgcc gggatagacc accctgccct
     3181 ccaccacgtt cagccccagc cgcaatgccg gatcggcttt gcaggcggca cgccaaccct
     3241 gcttggccag cttaagtcca tatgggagcg tggcattggt cagggcgagg gtggacgtcc
     3301 ggggtacgcc acccggcata ttcgccacgg catagtgcag gatgccatcc acgaagtagg
     3361 tcgggttctc gtgggtggtt ggcttgatcg tctcgacgca gccaccctgg tcaaccgcga
     3421 cgtccacgat gaccgagccc ggcttcatga ccttgaggtc cgcccgcttc accagatggg
     3481 gggccttggc ccccgggaga agcaccgccc cgatcaccag gtcggcccgg cggatggcgt
     3541 cgaggatgtt gtgccggttg gagtaagcgg tgtccacgtt ggccggaaga acgtcgtcga
     3601 gatagcggag ccgatcgagc gagatgtcga ggatggtgac gtgggcgccc agacccgccg
     3661 ccatcttggc cgcgttgatg ccgaccacgc cgccgccgat gatcaccacc tcgccagggg
     3721 ccacccccgg cacgccgccc agcagaatgc cgctcccgcc gaagaccttt tccaggtact
     3781 tcgccccctc ctgcaccgac atccggcccg ccacttcgga catcggcgtg agcagcggca
     3841 gctcgccgct ggggagctgc accgtctcgt acgccaccgc gatcgccccc gagtcgatga
     3901 cggcccgggt gagatcgtcg gcggccgcga agtggaagta ggtgtagatc acctggcccg
     3961 tgcgcatccg gggccactcc ggcgcgatcg gctccttcac cttcatgatc atctcggcct
     4021 gcgtccagac ctcctccgcc gtgggcagga tcttcgctcc gaccgcggtg taggccgcgt
     4081 cgggaaagcc gctgccgaga ccggcgccct gctcgatgaa cac
//
LOCUS       DASUYN010000034         4184 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1553561, whole genome shotgun sequence.
ACCESSION   DASUYN010000034 DASUYN010000000
VERSION     DASUYN010000034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4184)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4184)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4184
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1553561"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1356)
                     /locus_tag="VF061_00685"
     CDS             complement(<1..1356)
                     /locus_tag="VF061_00685"
                     /inference="COORDINATES: protein motif:HMM:TIGR00813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:solute symporter family protein"
                     /protein_id="HEX6668038.1"
                     /translation="MPQIQLGGIDYAILIVYFVFVLGIGWALRRFVRSSEDFFLSGRS
                     IPTWIAGLAFLSANLGAQEVIGMAASGAKYGMMTSHFYWIGAIPAMVFVGLFMMPFYY
                     GSRARSVPEYLRLRFDEKTRGFNAITFAGMTVFSSGISMYALAKLLELVLGWNFHASV
                     LVSAAIVLGYIFLGGLTSAIYNEVLQFFLIVLGFLPLVLLGLKDLGGWSGLSRQLEPV
                     ATSAGYQAGAWSESWRHLGSADANPMGVEWFGLAMGLGFVLSFGYWCTDFLVVQRAMA
                     AESMTAARRTPLLAAVPKMIFPLLVIVPGMIAIALHHHRGGLLPLGADGTPNYNLAVP
                     VLLAHYLPSGLLGLGLTALMASFMSGMAGNVTAFNTVWTYDIYQSYIKPGQSDRHYLR
                     MGHAATVFGILLSVAAAYAATRFNNIMDMLQLVFAFVNAPLFATFLSGMFWKRATGHG
                     AF"
     gene            1531..3573
                     /locus_tag="VF061_00690"
     CDS             1531..3573
                     /locus_tag="VF061_00690"
                     /inference="COORDINATES: protein motif:HMM:NF022039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 97 protein"
                     /protein_id="HEX6668039.1"
                     /translation="MPSLPSAAVPLTAALVLMASPLGSQVRVTSPDGRNEVSVEIREG
                     RLGYGMSRDRRPLLLPSLLGFELRGAPALRDGLRITDTTRGAHDEWWTQPWGEVARVR
                     DHYNELAVAVEETTAPGRKFIVRIRAFDDGIGFRYELPEQPGLGAFEISDELTEFNLA
                     DNGRAWWIPSNWPRMDRSEMLYSSGPVSVLDSVQTPLTLELQDGHTAMVIHEANLVDY
                     ARMFLKGERTESRVLRAALAPLAGGVKVRGRTPFETPWRTIQVADRVTDLAPSLLGLK
                     LNPPSRIANTDWIRPLKYVGIWWGMHIGTMTWGSGPKHGATTENTRRYIDFAAGNGLG
                     GVLVEGWNVGWDGDWIQNRNAFSFTQAYPDYDLAALAAYAKEKGVRLIVHNETSGGIQ
                     NYERQMDSAFALYRSLGLDAIKSGYVTDNTSEGHSHYSQFMVRHYRKVIEKAAEHGIM
                     LNVHEPMHDTGERRTWPNMVSREGSRGQEYNAWSADGGNPPEHETILFFTRMLSGPMD
                     FTPGIFDLLYQRSTGQARRPDEPRVRTTLAKQLALYVVLYSPVQMAADLPENYEGRPE
                     FQFIRDVAVDWDTTRVIDARIGDYVAVARRERGGRSWFLGAITDEHGRTLEIPLSFLT
                     PGRRYVAEIYADGPKAHWLDNPLPVTISSRPVTSATRLRVALAPGGGQAIRIRPAR"
     gene            3590..>4184
                     /locus_tag="VF061_00695"
     CDS             3590..>4184
                     /locus_tag="VF061_00695"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX6668040.1"
                     /translation="MTARTAPVAGTKPRLSFWDIWNMSFGFLGIQFGFGLQNANVSRI
                     FETLGARVEDIPILWIAAPVTGLLVQPVVGYFSDRTWNRLGRRRPYFLGGAILASLAL
                     VAMPNSPSLWVAAGVLWIMDASINITMEPFRAFVGDNLPSEQRATGFAMQSFLIGTGA
                     VLASLLPWLLTRQFGVSNEAAQGMVPESVRWSFYVGAA"
BASE COUNT          710 a         1463 c         1394 g          617 t
ORIGIN      
        1 gaaggcgccg tggccggtgg cccgcttcca gaacatgccc gacaggaacg tggcgaacag
       61 cggggcgttc acgaaggcga acaccagctg cagcatgtcc atgatgttgt tgaaccgggt
      121 cgccgcgtag gccgccgcca cgctgaggag gatgccgaac accgtggccg cgtgccccat
      181 ccgcaggtag tgccggtccg actggccggg cttgatgtac gactggtaga tgtcgtacgt
      241 ccacaccgtg ttgaacgccg tgacgttgcc ggccatcccc gacatgaacg aggccatcag
      301 cgccgtcagc ccgagcccga gcaggcccga cggcaggtag tgggccagca gcacgggcac
      361 cgccaggttg tagttcggcg tgccgtccgc tcccagcggc agcagcccgc cgcggtgatg
      421 gtgcagcgcg atcgcgatca tgccgggcac gatcaccagc agcgggaaga tcatcttcgg
      481 caccgccgcg agcagcgggg tccggcgggc ggcggtcatg gactcggccg ccatcgcccg
      541 ctgcaccacc aggaagtcgg tgcaccagta gccgaacgag agcacgaacc cgagtcccat
      601 ggccaggccg aaccactcga cccccatggg gttggcgtcg gccgagccga ggtggcgcca
      661 ggactccgac cacgcgcccg cctggtagcc cgcgctggtg gccaccggct ccagctgccg
      721 cgagagcccc gaccatccgc cgagatcctt caggccgagc agcaccagcg gcaggaagcc
      781 cagcacgatc aggaagaact gcagcacctc gttgtagatc gcggacgtga gtccacccag
      841 gaagatgtag cccagcacga tcgcggctga taccagcacg ctggcgtgga aattccagcc
      901 cagcaccagc tccagcagct tcgcgagcgc gtacatcgag atgccggagg agaacaccgt
      961 catccccgcg aaggtgatgg cgttgaagcc gcgggtcttc tcgtcgaagc ggaggcggag
     1021 gtactccggc accgagcgcg cccgggagcc gtagtagaag ggcatcatga acagacccac
     1081 gaacaccatc gccggaatcg cgccgatcca gtagaagtgg ctcgtcatca tcccgtactt
     1141 cgcgcccgag gccgccatgc cgatcacttc ctgggcgccc aggttggccg agaggaaggc
     1201 gagcccggcg atccaggtgg ggatcgaacg gcccgacagg aagaagtcct cgctgctccg
     1261 cacgaatcgg cgcagcgccc agccgatgcc gagcacgaag acgaagtaga cgatcaggat
     1321 ggcgtagtcg atcccgccga gctggatctg gggcacggtc ggtgttccgg agggtgggca
     1381 ggaaaaggtt gaggacgccc aaatgcctgc ctatgttcgg cgctccggcc cctggacgca
     1441 aggtccgctg gctgacggcc atcggccgcc ttagcttgac ccgggcgggc tctcgagcgc
     1501 cgccctcaca ccgaatccag gtaccgccgc atgccatcgt tgccctccgc cgccgtcccc
     1561 ctcaccgccg ccctcgtgct catggcctcg cccctcggca gccaggtgcg cgtcacgtcc
     1621 cccgacggcc ggaacgaagt ctccgtcgag atccgcgagg gccggctcgg ctacggcatg
     1681 tcccgcgacc gccggccgct gctgctgccg tcgctgctcg gcttcgagct ccggggcgcg
     1741 ccggccctcc gcgatggact tcgcatcacg gataccaccc ggggggcgca tgacgagtgg
     1801 tggacccagc cctggggcga ggtggcccgg gtgcgcgacc actacaacga gctggccgtc
     1861 gcggtcgagg agaccaccgc tcccggtcgg aagttcatcg tccggatccg cgcgttcgac
     1921 gacggtatcg ggttccgcta cgagctgccc gagcagcccg gtctcggggc cttcgagatc
     1981 agcgacgagc tgaccgagtt caacctcgcc gacaacggcc gggcctggtg gatcccgtcc
     2041 aactggcccc ggatggaccg ctcggagatg ctgtactcct ccggtccggt gagcgtgctc
     2101 gacagcgtcc agacgccgct cacgctggag ctgcaggacg gccacaccgc catggtgatc
     2161 cacgaggcca acctggtgga ctacgcccgg atgttcctca agggcgagcg caccgagagc
     2221 cgggtgctcc gcgcggccct ggcccccctg gcgggcgggg tgaaggtgcg aggccgcacg
     2281 ccgttcgaga cgccctggcg aaccatccag gtggccgacc gcgtcaccga cctcgcccct
     2341 tcgctgctcg gactcaagct caatccccca agccgcatcg cgaacaccga ctggatccgt
     2401 cccctgaagt acgtcggcat ctggtggggc atgcacatcg gcaccatgac ctggggctcc
     2461 ggacccaagc acggcgccac cacggagaac accaggcggt acatcgattt cgcggccggc
     2521 aacggccttg gcggcgtgct ggtggaaggc tggaacgtcg gctgggacgg cgactggatt
     2581 cagaaccgga atgcgttctc cttcacccag gcctatccgg attacgacct cgccgccctg
     2641 gccgcgtatg ccaaggagaa gggggtacgt ctcatcgtgc acaacgagac gtcgggcggc
     2701 attcagaact acgagcggca gatggacagc gccttcgcgc tgtaccggtc gctcgggctc
     2761 gacgccatca agtccgggta cgtcaccgac aacaccagcg agggccactc gcattattcg
     2821 cagttcatgg tgcggcacta tcgcaaggtg atcgagaagg cggcggagca cggcatcatg
     2881 ctcaacgtgc acgagccgat gcacgacacc ggcgagcgcc gcacctggcc caacatggtg
     2941 agccgcgagg gctcgcgggg ccaggagtac aacgcctgga gcgccgacgg agggaatccc
     3001 cccgagcacg agaccatcct gttcttcacc cgcatgctct ccgggccgat ggacttcacc
     3061 ccggggatct tcgacctgct gtaccagcgc agtaccgggc aagcccggcg gcccgacgag
     3121 ccccgggtgc gcaccacgct ggccaagcag ctcgcactct acgtggtgct gtactcgccg
     3181 gttcagatgg ccgcagacct gccggagaac tacgagggca ggcccgagtt ccagttcatc
     3241 cgtgatgtgg cggtggactg ggacaccacc cgggtgattg acgcgaggat cggtgactac
     3301 gtggcggtcg cgcggcggga gcgaggcggt cggagctggt tcctgggggc catcaccgac
     3361 gagcacggcc gaacgctgga gatacccttg tcgttcctga cgcccggccg ccggtacgtg
     3421 gccgagatct acgccgacgg ccccaaggcc cactggctcg acaacccgct ccccgtgacg
     3481 atctccagcc ggccggtgac ctccgccacc cgcctgcgtg tcgcgctcgc gcccggaggt
     3541 ggtcaggcga tccgcatccg cccggccaga tgagccggtc atcccggtca tgacagcccg
     3601 taccgccccg gtcgccggta cgaagcccag gctctcgttc tgggatatct ggaacatgag
     3661 cttcggattc cttggcatcc agttcgggtt cgggctccag aacgccaacg tgagccggat
     3721 cttcgagacc ctcggcgccc gggtcgagga catcccgatc ctctggatcg cggcgccggt
     3781 gaccgggctc ctggtgcagc cggtcgtggg ctacttcagt gaccggacct ggaaccggct
     3841 cggccggcgc cgaccctact tcctgggcgg ggccatcctc gcatcgctcg ccctcgtggc
     3901 gatgccgaac tcgccctcac tctgggtggc ggccggggtg ctctggatca tggacgcgtc
     3961 gatcaacatc acgatggagc cgttccgtgc cttcgtgggc gacaacctcc cctcggagca
     4021 gcgcgcgacg ggcttcgcga tgcagagctt cctgatcggc accggcgcgg tgctcgcctc
     4081 gctcctcccg tggctgctga cgcggcagtt cggcgtgagc aacgaagcgg cccagggcat
     4141 ggtccccgag tccgtccggt ggtccttcta tgtcggcgcg gccg
//
LOCUS       DASUYN010000035         2025 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_231592, whole genome shotgun sequence.
ACCESSION   DASUYN010000035 DASUYN010000000
VERSION     DASUYN010000035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2025
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_231592"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            230..910
                     /locus_tag="VF061_00700"
     CDS             230..910
                     /locus_tag="VF061_00700"
                     /inference="COORDINATES: protein motif:HMM:NF036807.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HEX6668041.1"
                     /translation="MIGGTQMKLIGVGFGRTGTMSLKGALEELGVPCFHMIDLIMGEN
                     RDRDLPYWIQIANGEPVDWDEVFEPWEATVDWPACSRWEELIEAFPDVPVLLNVRDFD
                     GWYTSVENTILAVKEAAMAGELAQDANRDGPSPELWGVIEKLIWQGDFQGNFKDRDWT
                     RKMYFDRIETIKRTVPADRLIVWELGVDGWEPICEALGVDVPDKPFPRLHDTNEFRTE
                     FGLQPLPA"
     gene            complement(907..>2025)
                     /locus_tag="VF061_00705"
     CDS             complement(907..>2025)
                     /locus_tag="VF061_00705"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhN family protein"
                     /protein_id="HEX6668042.1"
                     /translation="TSRPPSRRRSPLRWHRRRPTPLPHSFPGMTPGALARRGLLLAVT
                     GVSLYLLAPALLEVFGAFDELDDVNPLWFAAMVALQAGSYGCIWGLQRIAVRSHHWGP
                     VITSQLASNAFGRLVPGGVAAAAAMQYSMLVRGGVPAVAVASGLTASSLLVFGTLLAL
                     PLLTVPAVITGVAVDPVLARAAVAGAVVFVALFALGVACAVWDRPLELMGRAAQAVRN
                     RVLRRREPLTGLPAELIRERDVVITALGESWWEALLLAAGRWVLDYMTLLSALYAVGS
                     NPRASLVLLAFCAAQLLGTMPLTPGGLGFVEAGLTGTLALAGVGAAAAVVATLAYRLA
                     SFWLPIPAGGAAALIHRRRYGPADVEEVAAPPAGGRPD"
BASE COUNT          336 a          704 c          762 g          223 t
ORIGIN      
        1 gtgaacgagc tcacgaactg gcgccgccag ctcgccgaga accgcaccac agccctggtg
       61 ggtgcagcgg tggccggctt cgtgatcggc ggcggcgtgg ccgcgacggt gtcgatcctc
      121 actcgccgaa gccgccgctg aggcgaggaa cggcgcaaaa caggcgccct cgcgatgcgc
      181 cagctagagt gccgcccgca aacttggcgc cccgccacgg ggcgctcgga tgatcggggg
      241 aacgcagatg aagctgatcg gggtgggttt tggccgcacc ggaacgatgt cgctcaaggg
      301 cgcactcgag gagctcggcg tgccgtgctt ccacatgatc gacctgatca tgggggagaa
      361 ccgggaccgc gacctgccgt actggatcca gatagccaac ggcgagccgg tcgactggga
      421 cgaggtcttc gagccgtggg aggccacggt cgactggccc gcgtgctcgc gctgggaaga
      481 gctgatcgag gccttcccgg atgttccggt gcttctcaac gtccgcgatt tcgacggctg
      541 gtacacgagc gtcgagaaca ccatcctggc cgtgaaggag gccgcgatgg cgggcgagct
      601 ggcgcaggac gccaaccgcg acggcccctc gccggagctc tggggcgtga tcgagaagct
      661 gatctggcag ggtgacttcc agggcaactt caaggaccgc gactggacgc ggaagatgta
      721 tttcgaccgc atcgagacca tcaagcgcac ggtgccggcc gaccggctga tcgtgtggga
      781 gctcggcgtg gacggctggg agccgatctg cgaggcactc ggcgtggacg tgccggacaa
      841 gccgttcccg cggctgcacg acacgaacga gttccggacc gagttcgggc tccagccgct
      901 gccggcctag tccggccgcc ccccggcggg cggggccgcg acctcctcca cgtcggccgg
      961 cccgtagcgc cggcggtgga tcagcgcagc cgccccgccc gccgggatgg gcagccagaa
     1021 cgacgccagc cggtacgcaa gggtggccac caccgccgcg gcggcgccaa cgccggccag
     1081 cgcgagcgtt cccgtgaggc ccgcctcgac gaagccgagg ccgcccggcg tgagcggcat
     1141 cgtgccgagc agctgcgcgg cgcagaacgc cagcagcacc agcgaggccc gcgggttcga
     1201 gccgaccgcg tacagcgcgg agagcagggt catgtagtcg agcacccagc ggccggccgc
     1261 gaggagcagc gcctcccacc agctctcgcc gagcgcggtg atcaccacgt cacgctcgcg
     1321 gatcagctcg gcgggcagcc cggtgagcgg ctcgcgccgc ctgagcacgc ggttgcgcac
     1381 cgcctgggcg gcgcggccca tcagctccag cgggcggtcc cagacggcgc aggcgacgcc
     1441 cagggcgaac agtgccacga acaccacggc gccggccacc gccgcccggg ccaggacggg
     1501 gtcgaccgcc acgccggtga tcaccgcggg cacagtgagg agcgggaggg ccagcagcgt
     1561 gccgaacacg agcagcgagg aggccgtgag gccggaggcc actgcgaccg ctgggacccc
     1621 gccgcgcacg agcatcgaat actgcatggc cgccgcggcc gccacgccgc cgggaaccaa
     1681 gcgcccgaac gcgttcgacg cgagctggga ggtgatcacg ggaccccagt ggtgggagcg
     1741 cacggcgatc cgctgcagcc cccagatgca gccgtagctg cccgcctgga gcgccaccat
     1801 cgcggcgaac cacagcgggt tgacgtcgtc gagctcgtcg aacgcaccga acacctcgag
     1861 cagcgcgggg gcgagcaggt agagcgagac ccccgtgacc gcgagcagca ggccacggcg
     1921 ggcgagcgcg ccgggcgtca tgcccggaaa gctatgcggg agcggggtcg ggcgacggcg
     1981 gtgccatcgg agggggctcc ggcggcggct cggcgggcgg ctcgt
//
LOCUS       DASUYN010000036         2177 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_452422, whole genome shotgun sequence.
ACCESSION   DASUYN010000036 DASUYN010000000
VERSION     DASUYN010000036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2177)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2177)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2177
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_452422"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..307
                     /locus_tag="VF061_00710"
     CDS             <1..307
                     /locus_tag="VF061_00710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cell division protein FtsH"
                     /protein_id="HEX6668043.1"
                     /translation="ERTAQMVDDEVKRLIDEAYARASSILSEHRDLLDRIAQALLDRE
                     TIDREDLDRLAKNQPLPPRTLPPVEPSAAAAGPVAKAGAAPSRAPILGAPPAEPAGA"
     gene            427..1476
                     /gene="folP"
                     /locus_tag="VF061_00715"
     CDS             427..1476
                     /gene="folP"
                     /locus_tag="VF061_00715"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR01496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004156 - dihydropteroate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HEX6668044.1"
                     /translation="MTGLDQGALEALVPFAGGLGLEVLTGNGWAILAGSRSRLSALGR
                     PWTVPEPLAQIAAGVGIALPPAAPTAWRTARGSVFFDRPILLGILNVTPDSFSDGGRY
                     TGVDAALDQAEKLLAAGADIFDIGGESTRPGRTEDVPAAEELRRVIPVIQALARSYPE
                     LVISIDTVKAPVARAAIDAGAAVVNDVSALRLDPAMAGTVAAAGAGVILMHSRGSILE
                     VASYQHADYGGDVVSGVIAELRDALAQAAGAGISPDATVIDPGFGFSKTAEQNLLLFD
                     QLPALQTLGRPVLVGPSRKRFLGAMTGLPVEDRDRVTATACAMAYDRGARLFRVHDVA
                     GTREALSLARAVNGG"
     gene            1473..>2177
                     /locus_tag="VF061_00720"
     CDS             1473..>2177
                     /locus_tag="VF061_00720"
                     /inference="COORDINATES: protein motif:HMM:NF022481.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2723 domain-containing protein"
                     /protein_id="HEX6668045.1"
                     /translation="MSADSRADRPPYRTAAGVAAAVLIVYILTLAPTVTFWDAGEFIA
                     AAKTLGIPHPPGTPLFVLIAHVWAMLVPVGEYALRTNLLSAVLSAAAAGFFFLVVHET
                     TRKFAAGQDGAGGRLLALGGAAAAAMLGAFTFTNWQNSNETEVYTVATCTIAAMSWLA
                     HVWRRERGTDRGPRVLLLIVYLAGISIGNHLLALLAGPAVVMFMVATLLHDPAADPVR
                     RQTEWSQVAVVAGVWSL"
BASE COUNT          322 a          748 c          736 g          371 t
ORIGIN      
        1 ggagcgcacc gcccaaatgg tggacgatga ggtcaagcgt ctgatcgacg aggcctacgc
       61 tcgcgccagc agtattctga gcgagcaccg tgacctgctg gatcggatcg cccaggcgct
      121 gctcgatcgc gaaaccatcg atcgggaaga cctcgaccgg ctggcgaaga accagccgct
      181 tccgccccgc acccttccgc cggtcgagcc gagcgccgcg gctgcgggcc cagtggccaa
      241 agcaggcgcg gctccgtctc gcgccccgat cttaggagcg cctccggccg aaccagccgg
      301 cgcgtgaatg tcacgccgct agcgcttcac tcgccgcggg cggtgcgtga cgcgctccgc
      361 tcccacggat gggaggaaac gctagcggac accgccgccg agggcatttg cacctcggcg
      421 gttcatttga ccggactgga ccagggcgca ctcgaggctc tggtcccgtt cgctggtgga
      481 ctaggcctgg aggtcctcac cggcaacggc tgggcaattc tggctgggag ccggtcgcgg
      541 ttgagcgccc tcgggcggcc ctggaccgtc cccgaaccgc tcgcccaaat agctgccgga
      601 gtcggcatcg ccttgcctcc ggccgcaccc accgcctggc ggactgcccg gggctccgtc
      661 tttttcgacc gcccgattct gctaggaatt ctcaacgtca cacccgacag cttcagcgat
      721 ggcggccgat acaccggcgt cgatgcggcg ctcgaccagg ccgagaagtt gcttgccgcc
      781 ggagccgaca tcttcgacat cggtggcgag tccacccggc cgggccgcac cgaggacgtg
      841 cctgcggcgg aagagctgcg ccgggtgata cccgtaatcc aggcgctcgc gcggagctat
      901 ccggagctgg tcatctccat cgacaccgtg aaggccccgg tggcgcgcgc tgcgattgac
      961 gccggcgcag cggtggtgaa cgatgtctcg gccctccggc tcgatccggc catggccggc
     1021 accgtcgccg ccgcgggagc gggggtcatc ctgatgcact ctcgcggttc catcctcgag
     1081 gtggcctcat accagcacgc ggactacggc ggagacgtgg tgagtggggt gatcgccgag
     1141 ctccgtgacg cccttgcgca agcggcaggg gcggggatca gcccggatgc aaccgtaatc
     1201 gatccgggtt tcggattctc caagaccgcg gagcagaatc ttctcctgtt cgatcagctc
     1261 ccggccctcc agacactcgg gcgtcccgtt ctggttgggc cttcgcgtaa acgattcctc
     1321 ggcgccatga ccgggctccc ggtggaagac cgcgatcgcg tcacggccac cgcgtgtgcc
     1381 atggcctacg accggggagc ccggcttttc cgagtgcacg acgtcgccgg aactcgtgag
     1441 gcgctttcgc tcgcccgtgc cgtcaacggc ggatgagcgc cgattcgcgg gcggataggc
     1501 cgccgtatcg caccgcggcc ggcgtggcgg ccgcggtact gatcgtctac atcctgacgc
     1561 tcgcccccac ggtcactttt tgggatgccg gtgagttcat cgcggccgcc aaaacgctgg
     1621 ggatcccgca cccgccgggt actccgctct tcgtgctgat cgcccacgtg tgggcgatgc
     1681 tggttccggt tggggaatac gcgctccgaa ccaacctgct cagcgcggtg ctgagtgccg
     1741 cggccgctgg ctttttcttt ctcgtcgtcc acgagacgac gcgcaaattt gccgccggcc
     1801 aggatggggc cgggggccga ttgctggcgc tgggcggcgc ggcggcggcc gcgatgctcg
     1861 gggcctttac cttcaccaac tggcagaact cgaacgagac cgaggtgtac acggtcgcca
     1921 cgtgtactat cgccgcgatg agctggctgg cacatgtatg gcggcgcgag cgaggcaccg
     1981 accgcgggcc tcgagtgctg ctgctgatcg tgtacctggc cggaatatcg atcggcaacc
     2041 acctcctggc cctcctcgcg ggccccgcgg tggtgatgtt catggtcgct acgctgctgc
     2101 acgatccagc ggcggatccg gtccgacgcc aaacggaatg gtcacaggtt gccgttgttg
     2161 ccggcgtgtg gtcgctg
//
LOCUS       DASUYN010000037         3432 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_11422, whole genome shotgun sequence.
ACCESSION   DASUYN010000037 DASUYN010000000
VERSION     DASUYN010000037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3432)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3432)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3432
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11422"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..931)
                     /locus_tag="VF061_00725"
     CDS             complement(<1..931)
                     /locus_tag="VF061_00725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HEX6668046.1"
                     /translation="MTQTTAAPREILTLVEHGLFPIRIHANLTPAALIEHAVARGEGV
                     LTERGAFCAITTPHTGRSPKDKFVIEEPGGSERIWWEKNPRLDPAAFERLHEDVRGYL
                     DARDVFVQDLFAGSDMAYRVPVRFVTPNAWHALFVRNMFIRAMPAELAQFRPGFTVLH
                     APDFQADPSRHGTRTGTFVVIHFGKKLVLIGGTRYAGEMKKSIFTALNYLLPAQGVMP
                     MHCSANVGPSGDTAIFFGLSGTGKTTLSADPTRQLIGDDEHGWSDRGVFNFEGGCYAK
                     VIRLRAESEPEIYSATQMFGTVLENVMIDPTSRT"
     gene            complement(1073..1738)
                     /locus_tag="VF061_00730"
     CDS             complement(1073..1738)
                     /locus_tag="VF061_00730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668047.1"
                     /translation="MRRTAGGLAAGAALAVVACGDIGAPVRGDLYEWRLEAPAVPGPG
                     LDTLSFHWSRDELPVRVWVEDASGLPAHMERAIDVWESAFLYGEFEATLVSDSSTADV
                     IVRGGTPEDKLRRLRLHSALAPECAGATDLDIDVASRELRLPIRVFVDPRSLPDDPGI
                     EPCLALTSIHELGHALGIFAHSEDPEDLMYVDPEVDLPSDRDRRTAEAAYHTPPNLQA
                     IRP"
     gene            complement(1735..2334)
                     /locus_tag="VF061_00735"
     CDS             complement(1735..2334)
                     /locus_tag="VF061_00735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668048.1"
                     /translation="MLKPILLPALLLAAGPGALHAQTDYYARAGAMWASTLVRDVLVT
                     EVTVQQSIAPMVAVGASMPISPGYRAAIEGTLASGGYSAEQDGDEADLGTLRTASVLL
                     GLEGPVWRMVRWRVGLGGLFYWPSEDRGIFLEGGPVRFLAGAGADWRSPVLPSWDLLV
                     SARYDIHRFTTDELERRGFSQAQGVSRVSLSVGLARGIR"
     gene            complement(2366..3238)
                     /locus_tag="VF061_00740"
     CDS             complement(2366..3238)
                     /locus_tag="VF061_00740"
                     /EC_number="3.1.21.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016888 - endodeoxyribonuclease activity,
                     producing 5'-phosphomonoesters [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease IV"
                     /protein_id="HEX6668049.1"
                     /translation="MHQRRVADLLGAHVSAQGGVPNALARGKAIGATAIQVFTKTPNQ
                     WREPALTDETRTAFRRERDRSEIAQIVAHDSYLINLATPDPVLAARSLESFTSELRRC
                     ELLGIPAVVSHPGNFIDDREAGLRRNAAAVTRSLQAVPGDVMVLLETTAGSGTSLGAT
                     FEELAALRAAVDESVRHRVAFCADTCHLYSAGYDLRTDYDGVWRRWKQIIGLGLLRCI
                     HLNDSKTPFGSRRDRHELIGEGSLGPEPFRRIMRDRRFTRVMKVIETPKGDDEVTLDR
                     RMLRRLRAYARGPR"
BASE COUNT          514 a         1150 c         1264 g          504 t
ORIGIN      
        1 cggtgcggga ggtgggatcg atcatcacgt tctcgagcac cgtcccgaac atctgggtgg
       61 ccgaatagat ctcgggctcg gactccgccc ggagccggat caccttcgcg taacacccgc
      121 cctcgaagtt gaacaccccg cggtcgctcc agccgtgctc gtcgtcgccg atgagctgcc
      181 gggtcgggtc ggcggacaag gtcgtcttgc cggtgcccga gagcccgaag aagatcgcgg
      241 tgtcgcctga cggaccgacg ttggccgagc agtgcatcgg catgacgccc tgggccggca
      301 gcaggtagtt gagcgcggtg aagatggact tcttcatctc gccggcgtac cgggtgccgc
      361 cgatcagcac cagcttcttg ccgaagtgga tgacgacgaa ggtgccggtc cgggtgccgt
      421 ggcgcgacgg gtcggcctga aaatcgggcg cgtgcaggac ggtgaacccg gggcggaact
      481 gcgccagctc ggccggcatg gcccggatga acatgttccg cacgaagagc gcgtgccacg
      541 cgttcggggt gacgaagcgt accggcaccc ggtaggccat gtccgagccg gcgaacaggt
      601 cctggacgaa gacgtcgcgc gcgtcgagat agccgcgcac gtcctcgtgc agccgctcga
      661 acgcggcggg atccagccgc gggttcttct cccaccagat ccgctcggag ccgccgggct
      721 cctcgatcac gaacttgtcc ttgggggagc gtccggtgtg gggcgtggtg atggcgcaga
      781 aggcgccgcg ctcggtcagc actccctccc cgcgggcgac ggcgtgctcg atcagcgcgg
      841 ccggggtaag attggcgtgg atccggatgg ggaagaggcc gtgctccacc agcgtgagga
      901 tctcacgcgg ggctgcggtg gtctgcgtca tacactcccg tgcgcccggc ggcgcggaag
      961 aagggctcgg cggctaccct gccgccacct gcggagcgga aagatcggca tgccgcgtgc
     1021 cgggggcaac gtccgctcgc gcccgtagct taacctgatg tcccctaatg gtctacgggc
     1081 ggatggcctg gagattgggc ggggtgtggt aggccgcttc cgccgtgcgc ctgtcgcggt
     1141 cgctcggcag gtccacttcg ggatcgacgt acatcaggtc ctccggatcc tccgagtggg
     1201 cgaagatgcc cagggcgtgc cccagctcgt ggatgctggt gagggccagg cagggctcga
     1261 tgccgggatc gtcggggagg gagcgggggt ccacgaatac ccggatcggg agccgcagct
     1321 cccgggaagc cacgtcgatg tcgaggtcgg tggccccggc gcactcgggg gcgagcgcgc
     1381 tgtgcagccg gagccgccgc agcttgtcct ccggggtccc gccccgcacg atcacgtccg
     1441 cggtggagga gtcgctcacc agggtcgcct cgaactcccc gtagaggaag gccgattccc
     1501 acacgtcgat ggcgcgctcc atgtgggccg gcaggccgct cgcatcctcc acccagacgc
     1561 ggaccggcag ctcgtcccgg ctccagtgaa agctcagcgt gtcgaggccg gggccgggta
     1621 ccgcgggcgc ctccagcctc cactcgtaga gatctccccg caccggggcg ccgatatcgc
     1681 cgcaggccac tacggccagg gccgccccgg cggcgaggcc gccagcggtg cgcctcatcg
     1741 gatcccccgg gcgagtccca ccgagagcga cacccggctc acgccttggg cctgggagaa
     1801 tccccggcgc tcgagctcgt cggtggtgaa gcggtggatg tcatagcgcg ccgagaccag
     1861 aaggtcccag ctcggcagga ccggactgcg ccagtcggcc cccgcgccgg ccaggaaccg
     1921 gaccggtccg ccttcgagga agatgccgcg atcctcggag ggccagtaga agagtccgcc
     1981 cagccccacg cgccagcgca ccattcgcca caccggtccc tcgagcccca ggagcaccga
     2041 ggcggtgcgc agggtgccca ggtcggcctc gtcgccgtcc tgctcggccg agtagccgcc
     2101 ggaggcgagc gttccctcga tggcggcgcg atagccgggc gagatcggca tactggcgcc
     2161 gaccgcgacc atcggcgcga tggactgctg gaccgtgacc tcggtgacca gcacgtcgcg
     2221 caccagggtg ctggcccaca ttgcgcccgc gcgggcgtag tagtccgtct gggcgtggag
     2281 cgccccgggg ccggccgcga gcagcagggc cgggagcagg atcggcttga gcatcggtgg
     2341 aagatggacg tcgcccggga gagggtcaac gtggaccgcg cgcgtaggca cgcagccgtc
     2401 tcagcatgcg acggtcgagg gtgacctcgt cgtcgccctt gggcgtctcg atcaccttca
     2461 tcacccgggt gaagcgccgg tcgcgcatga tccgccggaa gggctccggg ccgagcgatc
     2521 cctcgccgat cagctcgtgg cggtcgcggc gcgagccgaa cggcgtcttg gaatcgttga
     2581 ggtggatgca gcgcagcagg cccaggccga tgatctgctt ccagcggcgc cacacaccat
     2641 cgtagtcggt ccgcaggtcg tacccggccg agtagaggtg gcaggtgtcg gcgcagaagg
     2701 cgacccggtg gcggacgctc tcgtccaccg ccgcgcgcag ggcggccagc tcctcgaagg
     2761 tggcacccag ggaggtaccc gagccggccg tggtctcgag cagcaccatc acgtccccgg
     2821 gcaccgcctg aagggagcgg gtgacggcgg cggcgttgcg gcgcagcccc gcctcccggt
     2881 cgtcgatgaa gttgccgggg tgggagacca cggcgggaat gccgagcagc tcgcagcgtc
     2941 ggagctcgct ggtgaaggac tcgagggagc gggcggcgag gaccgggtcc ggggtggcga
     3001 ggttgataag gtaggagtca tgcgccacta tttgtgcaat ctcacttcga tcacgctcgc
     3061 gccggaacgc cgtcctggtc tcgtccgtga gcgcaggctc tcgccactgg ttgggggtct
     3121 tcgtgaacac ctggatcgcc gtggcaccga tggccttccc gcgtgcgagc gcgttgggca
     3181 cgcctccctg ggccgacacg tgggcgccga gcaggtcggc gactctccgc tgatgcattc
     3241 gacgctctcc gtcgcgtgac gaccggcagc cgtgtgctgc tcgcgggcga tgccgcggcc
     3301 cggcccgcgg ggctggagcg catcagcgcg ccgcggacgt ggctctcccg atcggaatcg
     3361 catagtagat cacggagtgt gggctcgtcg ggtgatagtc cgccccataa atttcgagat
     3421 ccgccgcgta ag
//
LOCUS       DASUYN010000038         2493 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1554570, whole genome shotgun sequence.
ACCESSION   DASUYN010000038 DASUYN010000000
VERSION     DASUYN010000038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2493)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2493)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2493
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1554570"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..275
                     /locus_tag="VF061_00745"
     CDS             <1..275
                     /locus_tag="VF061_00745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA carboxylase subunit beta"
                     /protein_id="HEX6668050.1"
                     /translation="MAVHGPEIERAQREKREVAPEVQRSMESMRADYEAQLDARHAAA
                     RGQVDAIVTPEDTRELLAFALRVCANYAGPHLGPFVLPPLDAVQPR"
     gene            279..>2493
                     /locus_tag="VF061_00750"
     CDS             279..>2493
                     /locus_tag="VF061_00750"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HEX6668051.1"
                     /translation="MRRTGWLAALLVLACAPAPREPASGSPAPDVAPPTPVAAPERAL
                     PPEEPVRRLAPPEVAHAHGWMPVASTGADRFLREHPSYDGRGVLIAILDTGVDPGVPG
                     LLATSTGQPKIVDVRDFSGEGRVPLAPVRPQGDTVTVAGRELGGFGRVVALHTGGAYY
                     GGILPEPALGALPPSDLNGDGDAVDSLPLIVAKGTDGWVLFADTDGDGSLGSERPVRD
                     YAAGRETFGWAPRGRTARVNLAANLTEEGGVPALDLNLALDAHGTHVAGIAAANDLYG
                     VSGFDGVAPGAQLLALKISNRANGSVSGRGSIHAAMGHAIRFAAARRRPLVINLSFGV
                     GNEREGDARIDRLIDSVLAEHPEVPLVVSAGNDGPGLSTIGFPGSAPRAISVGGTVPA
                     AFLPPTPNPAAEIVADFSARGGEVAKPDVVAPGVAYSSVPRWNAGDEVKQGTSMAAPH
                     VAGLVALLLSAMAQERRAVHASSIRQALMVTARPARSSGYLDEGRGLPDLDAAYRWLR
                     DGGAAPAIEARVAGSRTTGAWVVAGPAGARSGVVRFELTRPADASPATYTLHSDSPWL
                     TAPPSITLSGERTAVELRYVAGELAAPGAYTALVSGWPADTSAGPAFRLVSTVVVPAT
                     AADTALVLRREVAVGPGEVLRSFFRAELARPFQVRVASVAGQQGLVHLHEPGGAPFRE
                     VGGRPVGSGDEAALYRVDARDVVPGEYQAAVVAVPGGRVAATATVLHAPMTVTTRA"
BASE COUNT          304 a          908 c          951 g          330 t
ORIGIN      
        1 tgatggcggt gcacgggccc gagatcgaac gcgcgcagcg ggagaagcgc gaggtggcgc
       61 cggaagtgca acgctcgatg gagtccatgc gggccgacta cgaggcccag ctcgacgcgc
      121 gacacgccgc cgcacggggt caggtcgatg cgatcgtgac gccggaggac acccgggagc
      181 tgctcgcgtt cgccctgagg gtgtgcgcca actatgccgg cccgcacctc ggtcccttcg
      241 tgctgccccc gctggacgcg gtccagcccc gctagccgat gcgccgcacc ggctggctgg
      301 ccgcgctcct ggtgctggcc tgcgccccgg ctccccgcga gccggcttcc ggctctcccg
      361 ctcccgacgt ggctcccccg acaccggtcg ccgcgcccga gcgggcgctg cctcccgagg
      421 aaccagtcag gcgcctggcc ccgcccgagg tggcccacgc gcacggctgg atgccggtcg
      481 ccagtaccgg tgcggaccgc ttcctgcgcg agcatcccag ctacgacggc cgcggcgtgc
      541 tgatcgccat cctcgacacc ggagtggacc cgggagtgcc gggcctcctc gccacctcca
      601 ccggccaacc caagatcgtg gacgtgaggg acttctccgg cgaggggcgg gtgccgctcg
      661 ccccggtcag gccgcagggc gacaccgtca ccgtcgccgg gcgcgagctc ggcgggttcg
      721 gcagggtggt ggcgctccac accgggggcg cgtactacgg cggcatcctg ccggagcccg
      781 cgctgggcgc cctgccgccc tccgacctga acggcgacgg cgatgccgtg gattcgctcc
      841 cgctgatcgt ggcgaagggc accgacgggt gggtgctgtt cgccgacacc gacggtgacg
      901 gatcactcgg ctctgagcgg ccggtgcggg actacgccgc cggccgggag acgttcgggt
      961 gggctccccg tggccggacg gcgcgggtga acctggcggc gaacctcacc gaggaggggg
     1021 gcgtgccggc gctcgacctc aacctcgcgc tcgacgcaca cggcacccac gtggccggga
     1081 tcgccgccgc gaacgatctc tacggcgtga gtgggttcga cggagtggcc cccggcgccc
     1141 agctgctcgc gctcaagatc tccaaccgcg ccaatggcag cgtgtccggc cgcgggtcca
     1201 tccacgcggc gatggggcac gccatccggt tcgcggccgc tcggcgtcgg ccgctggtga
     1261 tcaacctgag cttcggcgtc ggcaacgagc gcgagggcga cgcccgcatc gaccggctga
     1321 tcgactccgt gctcgccgag catcccgagg ttccgctggt ggtgagcgcg ggcaacgacg
     1381 ggccggggct gtcgaccatc ggtttccccg gctcggcacc gcgcgccatc tcggtcggcg
     1441 gcaccgtacc ggcggcattt ctcccgccca cgcccaaccc cgcggcggaa atcgtggccg
     1501 acttcagtgc gcgcgggggc gaggtggcga agccggacgt cgtcgctccc ggggtggcct
     1561 acagcagcgt gccgcggtgg aatgcgggcg acgaggtgaa gcagggaacc agcatggccg
     1621 ctccccatgt cgcaggactg gtggcgcttc tcctctcggc catggcgcag gagcggcggg
     1681 cggttcacgc gagcagcatc cggcaggcgc tcatggtgac ggccaggccg gcgcggtcga
     1741 gcggatatct ggacgagggg cgaggcctcc cggacctcga cgcggcctat cgctggctga
     1801 gagacggggg ggccgcgccg gcgatcgagg cgcgcgtggc aggctcccgg acgacggggg
     1861 cctgggtcgt ggcgggcccg gccggtgcga ggagcggcgt cgtgcgattc gagctgaccc
     1921 gcccggccga cgcctccccg gcgacgtaca cgctccacag cgactccccg tggctgacgg
     1981 cgccgcccag catcacgctc tccggcgagc ggaccgcggt cgagcttcgc tatgtggccg
     2041 gggagctggc cgcgcccggc gcctataccg ctctggtctc cggctggccc gccgatacca
     2101 gcgccgggcc cgccttccgg ctggtgagca ccgtggtggt gcccgcgacc gcggcggaca
     2161 cggcgctggt ccttcgacgc gaggtcgcgg tcggccccgg cgaggtgctc cggtccttct
     2221 tccgcgccga gctcgcgagg ccgttccagg tcagggtcgc gagcgtggcc ggccagcagg
     2281 gtctcgtgca tctgcacgag ccgggtggcg cgccgttccg tgaggtcggc ggccggccgg
     2341 tcggctcggg cgacgaggcc gccctctatc gggtggatgc ccgggacgtg gtgccggggg
     2401 agtaccaggc ggccgtcgtg gcggtgccgg gtggacgagt ggccgcaacc gcgaccgtgc
     2461 tgcatgcgcc gatgacggtg accacgcgcg cgg
//
LOCUS       DASUYN010000039         2487 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1334532, whole genome shotgun sequence.
ACCESSION   DASUYN010000039 DASUYN010000000
VERSION     DASUYN010000039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2487)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2487)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2487
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1334532"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1000)
                     /locus_tag="VF061_00755"
     CDS             complement(<1..1000)
                     /locus_tag="VF061_00755"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEX6668052.1"
                     /translation="MIPDERSALALAGTVAELIGAADDAETTLAAVTDALRTGLGAER
                     VRLWVRAAGAASFGAVSSPAAPVSPARVASLDAVPPEPGAARVLLEHAGIDVGLLEAR
                     VAVGERERETLRLLCHILAPYLASLELSEDLAGEVVAQAREIEEHRRFTSLIIDSLPL
                     GLYVIDRDYRIQIWNRKRETGTQGLRRDQVVGRPVFEVLTRQPPEQLKEEFDRVFRTG
                     ELQQSEQEVTFGHEVHYFRMSKIPMRLDRDAITHVITIGEDVTDSRAVQGRIMQSEKL
                     AAIGQLAAGIMHEINNPLATIGACVAAIQGKLEDGHVTPEALGEYLDIIDREVERCS"
     gene            complement(997..1491)
                     /locus_tag="VF061_00760"
     CDS             complement(997..1491)
                     /locus_tag="VF061_00760"
                     /inference="COORDINATES: protein motif:HMM:NF024966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX6668053.1"
                     /translation="MRRLLLAAACLGAAAGCRIEDRTPEGTRRDEVAVQDVLARYTRG
                     LDRRDWDQVRSLFWRNGTYSGPLIPRSAGNPVSIDSAVQVFAGTLEGQEPSTFQVRSL
                     RTDLRQESDVAAAWVTLRRRTPLAGAGMVERDWVEHVVLRRIGSSWRILSVAGSSVPR
                     GSPR"
     gene            complement(1517..1969)
                     /locus_tag="VF061_00765"
     CDS             complement(1517..1969)
                     /locus_tag="VF061_00765"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HEX6668054.1"
                     /translation="MPAVGSVAPDFTLPSTSGSDVTLSGLRGKNVLLAFFPLAFTRVC
                     TTELCSFSAELGAFRDANTEVLPISVDSIPTLREFKAKERISVDLLSDFKREVSRRYG
                     TLLEERFHSNRAYILIDGDGIVRWTFAEEATGHRRENAELLEQIRALG"
     gene            complement(1993..>2487)
                     /locus_tag="VF061_00770"
     CDS             complement(1993..>2487)
                     /locus_tag="VF061_00770"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HEX6668055.1"
                     /translation="ALEPHPQLQGKSVEELLASLDTLPEAIRTPVRNNGGGHANHTAF
                     WEMMAPGGAKEPGGALAAAIDKAFGGFDKFKEQFAKACAGRFGSGWAWLIADPSGGLT
                     IDSTPNQDTPVMQKKQPILGCDVWEHAYYLKYQNRRPDYVTAWWNVVNWTDIGRRYDK
                     AVKK"
BASE COUNT          350 a          897 c          859 g          381 t
ORIGIN      
        1 cgctgcagcg ctccacctcg cgatcgatga tgtcgaggta ttccccgagc gcctccgggg
       61 tgacgtgccc gtcctccagc ttgccctgga tcgccgccac gcaggcgccg atggtggcga
      121 ggggattgtt gatctcgtgc atgatgccgg cggccagctg cccgatggcg gccagcttct
      181 ccgactgcat gattcgcccc tgcaccgcgc gcgagtcggt gacgtcctcc ccgatggtga
      241 tgacgtgggt gatggcgtcg cggtccagcc gcatcgggat cttgctcatg cggaagtagt
      301 ggacctcgtg cccgaaggtg acctcctgct cgctctgctg gagctcgccg gtgcggaaga
      361 cgcggtcgaa ttcctccttg agctgttccg ggggctgccg cgtcagcacc tcgaacaccg
      421 gtcgcccgac cacctgatcg cgccgcaggc cctgggtccc ggtctcccgc ttgcggttcc
      481 agatctggat ccggtagtcg cggtcgatca cgtagagtcc cagcggcagg ctgtcgatga
      541 tgaggctggt gaagcgccga tgctcctcga tctcgcgggc ctgcgccacc acctcgccgg
      601 ccaggtcctc ggagagctcc agcgaggcca ggtagggggc gagaatgtgg cagaggaggc
      661 gcagggtctc ccgctcccgc tcgcccaccg cgacccgcgc ttccagcagc cccacgtcga
      721 tcccggcgtg ctcgaggagg acgcgcgccg ccccgggctc cggcgggacg gcatcgagcg
      781 aggcgacccg cgccggggac accggcgccg ccggcgacga caccgcgccg aacgaggccg
      841 cgccggcggc ccggacccag aggcggaccc gctcggcccc gaggccggtc cgcagcgcgt
      901 cggtcaccgc cgccagcgtg gtctccgcgt cgtcggccgc accgatcagc tcggcgaccg
      961 tacccgcgag cgcgagcgcc gatcgctcat ccggaatcac cggggacttc ctcgcggcac
     1021 cgacgagccg gcgacgctga ggatccgcca gctcgacccg atccgccgca gcacgacgtg
     1081 ctccacccag tcccgctcca ccatgcccgc acccgccagt ggcgtgcgcc gccggagggt
     1141 cacccaggcg gccgcgacgt cgctctcctg ccggaggtcg gtccgcagcg agcgcacctg
     1201 aaacgtactc ggctcctgac cctcgagggt gccggcgaag acctgaaccg ccgagtcgat
     1261 ggagacggga ttgccggccg agcgggggat cagcgggccg gaataggtgc cgttgcgcca
     1321 gaagagcgag cggacctggt cccagtcccg tcgatccagt ccgcgggtgt agcgggcgag
     1381 cacgtcctgg accgcgactt cgtcccggcg ggtgccctcc ggcgtgcgat cctcgatccg
     1441 gcaccccgcg gccgcgccga ggcaggcggc cgcgagcagg agacggcgca tcgagctccc
     1501 tggtgtggta aggccgctat ccgagcgcgc ggatctgctc gagcagctcg gcgttctccc
     1561 ggcggtgacc ggtggcctcc tccgcgaagg tccagcggac gatgccgtcc ccatcgatga
     1621 ggatgtaggc ccggttggag tggaaccgct cctccagcag tgtgccgtac cgccggctca
     1681 cctcgcgctt gaagtcgctc agcaggtcca ccgagatccg ctccttggcc ttgaactccc
     1741 gcagcgtggg gatcgagtcc acgctgatcg gcagcacctc ggtgttcgcg tcgcggaagg
     1801 cgccgagctc ggcgctgaag gagcagagct cggtggtgca gacccgggtg aacgcgaggg
     1861 ggaagaacgc caggagcacg ttcttccccc gcagtccgga gagcgtcacg tcgctccccg
     1921 aggtggaagg cagggtgaag tcgggggcga cggagccgac cgccggcatg ggggcggcag
     1981 tcgccgccgc cttcacttct tcaccgcctt gtcgtagcgc cggccgatgt cggtccagtt
     2041 gaccacgttc caccaggcgg tcacatagtc cggacggcgg ttctgatact tgagatagta
     2101 ggcgtgctcc cacacgtcgc acccgaggat cggctgcttc ttctgcatca ccggggtgtc
     2161 ctggttgggc gtgctgtcga tggtgagccc gccgctcggg tccgcgatca accaggccca
     2221 cccgctgccg aaccgcccgg cgcaggcctt ggcgaactgc tccttgaact tgtcgaaccc
     2281 gccgaaagcc ttgtcgatcg ccgccgcgag cgcgccgccc ggctccttgg ccccgcccgg
     2341 cgccatcatc tcccagaacg ccgtgtggtt cgcatggccg ccgccgttgt ttcgcaccgg
     2401 cgtgcggatg gcttcgggca gggtatcgag actcgccagc aactcctcga ccgacttgcc
     2461 ctggagctgc gggtgcggct ccagcgc
//
LOCUS       DASUYN010000040         3051 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1334604, whole genome shotgun sequence.
ACCESSION   DASUYN010000040 DASUYN010000000
VERSION     DASUYN010000040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3051
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1334604"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..238
                     /locus_tag="VF061_00775"
     CDS             <1..238
                     /locus_tag="VF061_00775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668056.1"
                     /translation="TTLQGRGTDANDVAKVAGGTAAGAVVGRVLGGSSKGAIIGGIIG
                     GAVGTQRAIETQDRDVVVPAGSRVELTLQSGLTI"
     gene            360..647
                     /locus_tag="VF061_00780"
     CDS             360..647
                     /locus_tag="VF061_00780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668057.1"
                     /translation="MSRAFVNEDAGAAPERYPLPPRDDPGYPLAAARALLRGADVGDT
                     PGAEAATGYYFGDPTLKPEVERILAEAQEDGNERLEQLAERFLRRVGRGRA"
     gene            complement(619..2367)
                     /gene="aceK"
                     /locus_tag="VF061_00785"
     CDS             complement(619..2367)
                     /gene="aceK"
                     /locus_tag="VF061_00785"
                     /EC_number="2.7.11.5"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF002804.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008772 - [isocitrate dehydrogenase
                     (NADP+)] kinase activity [Evidence IEA];
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA];
                     GO_process: GO:0006006 - glucose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional isocitrate dehydrogenase
                     kinase/phosphatase"
                     /protein_id="HEX6668058.1"
                     /translation="MNLTGTPALSKGAAAAAAAIHTAYERWVLGFEEITRRARERFER
                     RDWRGAQADATARLALYRIHLDGAVADVSDILMDGVLERTRWAAVKSRHQEGLAGRTD
                     AELARTFFNSVTRRIFSTVGADPAIEYLDPAPDTGAAPEDRLVSTHVAPELDAALVRA
                     ILDSYHWSVAYAQPDRDAADVAAIMRERLDESGPGGPVTVEMLRPVFYRNKGAYLVGR
                     VRHGELMLPLVLPLIHAERGIVVDAVLMTENEASVVFGFSWSYFRVEASRPRAMIEFL
                     RTIMPLKRVDELYTAIGFNKHGKTELYRSLMAELERPEARFAFAEGDEGMVMAVFTLP
                     SFSAVFKIIKDTFGAPKNTTRQAVMDRYHFVFVRDRVGRLADAQEFEHLEFPRRCFPE
                     DLLQYLLTVAAATVRVEDEQVVVRQLYTERRVTPLNLFLRDADEAAACEAVLDYGNAI
                     KDLAAADIFTGDMLLKNFGVTRHGRVICYDYDELCLLSECRFRRLPQPTSIEEEFAAE
                     PWFHVGEMDVFPEEFRAFLVPPGPVRDAFLAAHGDLLDVEFWQGMQRRLAAGEVFDVF
                     PYRRAARLRRGRGRPA"
     gene            2437..>3051
                     /locus_tag="VF061_00790"
     CDS             2437..>3051
                     /locus_tag="VF061_00790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012536130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /protein_id="HEX6668059.1"
                     /translation="MPATAPTSPTPQAPADGQPITMKDGRLLVPAVPIIPFIEGDGTG
                     PDIWRASKRVFDAAVERAYGGKRRIAWMEVLAGEKAKDRLNSWLPDETLAAIERHLVA
                     IKGPLTTPVGGGFRSLNVALRQKLDLYACVRPVRWFEGVPSPVKAPQDVDMVIFRENT
                     EDIYAGIEYKAGTDEARRVVEFLQGQMGAQSIRFPATSAIGIKPV"
BASE COUNT          483 a         1068 c         1077 g          423 t
ORIGIN      
        1 gaccacgctg cagggcaggg gcacggatgc gaacgacgtg gccaaggtgg cgggcggcac
       61 cgcggccggc gccgtggtgg gccgcgtgct cggtggcagc agcaagggag ccatcatcgg
      121 cggcatcatc ggcggcgccg tcggcacgca gcgggcgatc gagacccagg atcgggacgt
      181 ggtggtgccg gcgggctcgc gagtcgagct gacgttgcag agcgggctca cgatctaagc
      241 cgggttgcag tgacgcgcct gtcaccctga gcgcagcgaa gggggccatg ccgaacatgg
      301 cccccttcgc tgcgctcagg gtgacatccc gcctccgcgc acatcgctat actcccctca
      361 tgtcccgagc cttcgtcaac gaagacgccg gcgccgcccc cgagcgctac ccgctccccc
      421 cacgcgacga tcctgggtat ccgctcgccg ccgcccgggc gctgctgcgc ggggcggacg
      481 tgggcgacac gcccggggcc gaggcggcga ccggctacta cttcggcgac ccgaccctga
      541 agccggaagt ggagcggatc ctggccgagg cgcaggaaga cgggaacgag cggctggagc
      601 agctggccga gcggttcctc aggcgggtcg gccgcggccg cgcctgagcc gcgcggcgcg
      661 gcggtaggga aagacgtcga acacctcgcc cgccgcgaga cgccgctgca tcccctgcca
      721 gaactccacg tccagcagat cgccgtgcgc cgcgaggaag gcgtcccgga ccggtcccgg
      781 cggcaccagg aaggcgcgga actcctcggg aaacacgtcc atctcaccca cgtggaacca
      841 cggctccgcc gcgaactctt cctcgatcga ggtgggctgg ggcagcctgc ggaagcgaca
      901 ctcggagagc aggcacagct cgtcgtagtc gtaacagatc accctcccgt gccgggtcac
      961 gccgaagttc ttgagcagca tgtccccggt gaaaatgtcc gccgccgcca ggtccttgat
     1021 ggcgttcccg tagtcgagca ccgcctcgca ggcggcggcc tcgtccgcgt cgcggagaaa
     1081 gaggttgagc ggggtgacac ggcgctcggt gtaaagctgg cggacgacca cctgctcgtc
     1141 ctccacccgc accgtcgcgg cggcgacggt gaggaggtac tgcagcaggt cctcgggaaa
     1201 gcagcggcgg gggaactcga ggtgctcgaa ctcctgcgca tcggccaacc ggcccacgcg
     1261 gtcgcgcacg aacacgaagt ggtagcggtc catcaccgcc tgacgggtgg tgttcttggg
     1321 cgcgccgaag gtgtccttga tgatcttgaa taccgcgctg aaggacggga gggtaaagac
     1381 cgccatcacc atgccctcgt cgccttcggc gaacgcgaaa cgtgcctccg gccgctcgag
     1441 ctcggccatc aggctccggt agagctcggt cttcccatgc ttgttgaagc cgatggcggt
     1501 gtacagctcg tccacccgct tgagcggcat gatggtgcgc aggaactcga tcatcgcgcg
     1561 gggccgggac gcctccaccc ggaagtagga ccagctgaac ccgaagacga cgctggcctc
     1621 gttctcggtc atcagcaccg cgtccaccac gatcccccgc tcggcatgga tcagcggcag
     1681 caccagcggc agcatcagct cgccgtggcg cacccgcccg accaggtagg cgcccttgtt
     1741 ccggtagaag accggccgca gcatctcgac cgtgaccggc ccccccggtc cgctctcgtc
     1801 gagtcgctcg cgcatgatcg ccgccacgtc ggcggcatcc cggtcgggct gggcgtaggc
     1861 gaccgaccag tgatagctgt cgaggatcgc tcgcaccagc gccgcgtcca gctccggggc
     1921 gacgtgagtg gagacgagcc ggtcctccgg tgcggcgccg gtgtccggag cgggatcgag
     1981 gtactcgatg gcgggatcgg cccccacggt gctgaagatc cggcgggtca ccgaattgaa
     2041 gaacgtgcgg gccagctccg cgtcggtcct gccggccagg ccctcctggt ggcggctctt
     2101 caccgcagcc cagcgggtgc gctccagcac cccatccatc aggatatcgc tcacgtcggc
     2161 gacggcgccg tcgagatgga tgcggtagag cgcgagccgc gccgtggcgt ccgcctgggc
     2221 gccgcgccag tccctccgct cgaagcgctc gcgggcccgg cgcgtgatct cctcgaagcc
     2281 gaggacccag cgctcgtagg cggtgtggat ggccgcggcg gccgcggcgg cccccttgga
     2341 aagggcgggc gtcccggtca gattcaacgt cgtctctcgt tcgggtcgca tcatcgatga
     2401 ggtgatcccg agcgaagcga aggaggatcg cctgccatgc ccgccaccgc gccgacgtca
     2461 ccgaccccgc aggctcccgc cgatgggcag cccatcacca tgaaggatgg gcggctgctg
     2521 gtcccggccg taccgatcat ccccttcatc gagggcgacg gcaccggccc cgacatctgg
     2581 cgcgcctcga agcgggtgtt cgatgcggcg gtggagcggg cgtatggcgg caagcggcgc
     2641 atcgcctgga tggaggtgct cgcgggggag aaggcgaagg accggctcaa cagctggctc
     2701 ccggacgaga ccctcgcggc gatcgagcgc cacctggtgg cgatcaaggg gcccctcacc
     2761 acgccggtcg gcggcgggtt ccgctcgctc aacgtcgccc tgcggcagaa gctcgacctg
     2821 tacgcctgcg tgcggccggt gcgctggttc gagggcgtgc cctccccggt caaggcgccg
     2881 caggacgtgg acatggtcat cttccgcgag aacacggagg acatctacgc ggggatcgag
     2941 tacaaggccg gcaccgacga ggcccgccgg gtcgtcgagt tcctccaggg ccagatgggc
     3001 gcccagtcca tccgcttccc ggccaccagc gcgatcggga tcaagcccgt g
//
LOCUS       DASUYN010000041         2751 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1776219, whole genome shotgun sequence.
ACCESSION   DASUYN010000041 DASUYN010000000
VERSION     DASUYN010000041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2751)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2751)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2751
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1776219"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..505
                     /locus_tag="VF061_00795"
     CDS             <1..505
                     /locus_tag="VF061_00795"
                     /inference="COORDINATES: protein motif:HMM:NF042672.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF6624 domain-containing protein"
                     /protein_id="HEX6668060.1"
                     /translation="GYHPRMRAVHEAHAARLGTILDQRGWPTEPRVGRDGAEAAWLIA
                     QHAIGRPALQRAALAALSQAAARGAVPALQPAMLEDRIRTLEGRPQRYGTQFDWDESG
                     ELSPLPVEDPDGLTERRRAVGLGPLDEAVQAQRDAAVREGERPPDDRHARRRRMEEWL
                     REVGWRR"
     gene            complement(509..1177)
                     /locus_tag="VF061_00800"
     CDS             complement(509..1177)
                     /locus_tag="VF061_00800"
                     /inference="COORDINATES: protein motif:HMM:NF014841.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEX6668061.1"
                     /translation="MRIGIIGAGNIGGALTRGLTALGHQVAVANSRGPHTLGALAKET
                     GASAVTVEEAARAGEVVVVSIPEKSVRELPRGLLADVPDSVVVVDTGNYYPRNRDGLI
                     EEIENGRTESRWVSDQLGRLVVKAFNNIYARSLAEGGKPKGARGRIALPIAGDDPGGK
                     AIVMRLVDELGFDPVDAGGLDESWRQQPGTPVYTKDFDADGVRRALAAASPERPAAFR
                     AGTK"
     gene            complement(1201..2241)
                     /locus_tag="VF061_00805"
     CDS             complement(1201..2241)
                     /locus_tag="VF061_00805"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX6668062.1"
                     /translation="MGSAAPGSPPRLYNRMDSILPTRRLGTQGLQVSALGLGCMGMSQ
                     SYGVPDDRESVATLHRALELGVTLFDTAEAYGPFTNEELLGRALAGRRDQVILATKFG
                     FRLEGNQLTGTDSRPRHIREVVAASLRRLRTDYIDLLYQHRVDPAVPIEDVVGTMGDL
                     VREGKVRFLGLSEAGEATIRRAHAVHPISALQSEYSLWERNLEGDILPLLRQLGIGLV
                     AFSPLGRGFLTGAARRAEEYAEGDYRRGDPRFQGANFDANMRAASVVQELARRRGAMP
                     SQVALAWLLHKGEGIVPIPGTKRRRYLEENLAAAFLALAPDEIGELDRTLAPETVAGP
                     RYNEKMMAFIDR"
     gene            complement(2201..>2751)
                     /locus_tag="VF061_00810"
     CDS             complement(2201..>2751)
                     /locus_tag="VF061_00810"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HEX6668063.1"
                     /translation="SPPVRVLGAGLLFLGLMLDTVDGAVARKRSETSLMGSVLDIAAD
                     RTYELALWVAFAQLGLIPAIIPLVVLGRTALTDALRSVGVAEGTAPFDQHRSRLSRFL
                     VASTWMRTGYSVTKVAAFCALALAQAFLEFPVGSAAHAVAPGLTLLGTAAAWVAVLFC
                     LSRGLPVIVDGLRGARVTSSII"
BASE COUNT          409 a          982 c          980 g          380 t
ORIGIN      
        1 cggataccac ccgcgcatgc gcgcggtgca cgaggctcac gccgcccgcc tgggcaccat
       61 tctcgatcag cggggctggc ccacggagcc gcgggtggga cgggatggcg cggaggcggc
      121 ctggctgatc gcgcagcacg cgatcggccg gccggccttg cagcgcgcgg cgctcgcggc
      181 gctgagtcag gcggcggcgc gcggggcggt gcccgcgctt cagccggcca tgctcgaaga
      241 ccgcatccgc acgctcgagg gcaggccgca gcgctacggg acccagttcg actgggacga
      301 atcgggcgag ctcagcccgc tgccggtcga ggaccccgac gggctcaccg agcggcggcg
      361 tgcggtaggt ctgggccctc tggatgaggc ggtgcaggcc cagcgggacg ccgcggtccg
      421 ggagggagag cggccgcccg acgaccggca cgcccggcgc cgccggatgg aggaatggct
      481 ccgggaagtg ggctggcgcc ggtgacactc acttcgtgcc ggcgcggaac gccgccggac
      541 gctcggggct ggccgccgcc agagcgcgcc gcacgccgtc cgcgtcgaag tctttggtgt
      601 acaccggcgt tccgggctgc tgccgccacg attcgtcgag cccgccggcg tcgaccgggt
      661 cgaagcccag ctcgtcaacc agccgcatga cgatcgcctt gccgccgggg tcgtcgccgg
      721 caatgggcaa ggcgatccgc ccgcgcgccc ccttcggctt gccaccctcc gccaggctgc
      781 gcgcgtagat gttgttgaag gccttcacca ccaggcgccc gagctggtcc gagacccatc
      841 ggctctcggt cctgccgttc tcgatctcct cgatcaaccc gtcgcggttg cgcggatagt
      901 agttcccggt atccaccacg accacgctgt cgggcacatc ggccaggagc ccccggggca
      961 gctcgcggac gctcttctcc ggaatgctca cgaccaccac ctcgccggcg cgggccgcct
     1021 cctcgaccgt caccgcgctg gccccggtct ccttcgccag ggccccgagg gtgtgggggc
     1081 ctcgcgaatt ggcgacggca acctggtgtc ccagcgcggt gaggccgcgg gtcagggccc
     1141 cgccgatgtt gcccgcgccg atgatgccga ttctcatcac tcctccagcc ctggtggagc
     1201 ctaccggtcg atgaatgcca tcattttctc gttgtatcgc ggacccgcca ccgtctccgg
     1261 tgccagggta cggtccagct caccgatctc gtcgggcgcg agggcgagga atgcggcggc
     1321 gagattctcc tcgaggtagc ggcgccgctt ggtacccggg ataggcacga tgccttcacc
     1381 cttgtgcagc agccaggcga gcgccacctg cgagggcatg gccccgcgcc ggcgggccag
     1441 ctcctggacc accgatgccg cgcgcatgtt ggcatcgaag ttggcgccct gaaaccgcgg
     1501 gtccccgcgc cggtagtcac cctccgcata ctcctccgcc cgccgggcgg ccccggtcag
     1561 gaagccgcgg cccaacgggc tgaaggccac caagccgatg ccgagctggc gcagcagcgg
     1621 caggatgtcg ccctccaggt tgcgctccca caacgagtac tcgctctgca gcgcagagat
     1681 cgggtggacg gcgtgggccc gccgaatcgt cgcctcgccc gcctccgaga ggccgagaaa
     1741 gcgcactttg ccctcgcgca ccaggtcgcc catcgtgccg accacgtcct cgatcggcac
     1801 ggccggatcc acccgatgct ggtacaggag atcgatgtag tcggttcgga gccggcggag
     1861 cgacgctgcg accacctcgc ggatgtgcct gggacggctg tcggtgccgg tcagctgatt
     1921 cccttcgagc cggaagccga acttcgtggc gaggatcacc tggtcgcgcc ggcccgccag
     1981 tgcgcggccc agcagctcct cgttggtgaa gggcccgtac gcctcggcgg tatcgaagag
     2041 cgtcaccccg agctccagcg cgcggtgaag cgtggcgacg gactcgcgat cgtcggggac
     2101 gccgtaggac tggctcattc ccatgcagcc aagtcccagg gccgagacct ggagtccctg
     2161 cgtgccgagc cgtctggtcg ggagtatcga atccatcctg ttatataatc gaggaggtga
     2221 cccgggcgcc gcggagccca tccacgatca ccggcagacc cctcgacaga cagaacagca
     2281 cggccaccca cgcggcggcg gtcccgagaa gggtgagccc gggtgccacc gcgtgtgccg
     2341 cggacccgac cgggaactcc aggaaggcct gcgcgagggc gagggcgcag aaggcggcga
     2401 ctttggtcac ggagtagccg gtccgcatcc aggtcgaggc gacgaggaag cgggagaggc
     2461 gactccgatg ctggtcgaag ggtgccgtgc cctccgcgac gccgacgctg cggagcgcgt
     2521 cggtcagggc ggttcggccc aagaccacga gcgggatgat cgccgggatc aggccgagct
     2581 gcgcgaaggc gacccagagt gccagctcgt aggttcgatc ggcggcgatg tcgagcacgc
     2641 tgcccatcag gctggtctcc gaccgcttcc tggcgacggc gccgtccacg gtgtcgagca
     2701 tgagcccgag aaacaggagc ccggcgccga ggacgcggac cggcggcgat c
//
LOCUS       DASUYN010000042         2354 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1114988, whole genome shotgun sequence.
ACCESSION   DASUYN010000042 DASUYN010000000
VERSION     DASUYN010000042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2354)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2354)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2354
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1114988"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..526
                     /locus_tag="VF061_00815"
     CDS             <1..526
                     /locus_tag="VF061_00815"
                     /inference="COORDINATES: protein motif:HMM:NF012945.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668064.1"
                     /translation="GYVLTEVGERVLFSRAVRAAMRLGYTEPDPREDLSGMDVGRKAL
                     ILARLLGYRGELSRAAVESLVPKWAAALPLPQFLERLHELDAGWKRRVDAARAQGNAL
                     RYVATVTPRNIAVGLRAVPLSSPLASLKGSDNQLVFTTARYKANPLVIRGPGAGAEVT
                     AAGVLNDILRLAGA"
     gene            523..1473
                     /locus_tag="VF061_00820"
     CDS             523..1473
                     /locus_tag="VF061_00820"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: protein motif:HMM:TIGR00191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004413 - homoserine kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006566 - threonine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HEX6668065.1"
                     /translation="MSGAVTAFAPGSIGNVGPGLDILGLAVAGDGDAVRAEWLDRPGL
                     RILDPGHPELPLEADRHAAGLAASAVLKRVGDAAAGGRGIGLTVRKGLPLSGGQGGSA
                     ASAVAGAVSVNALLGRPLDHVQLIEACLDAEEAVAGRHADNIAPSLLGGLVLIRSMDP
                     LDVVQLPVPADLHVVLAKPEQRMRTAEARAVLPREVPRAVALHQAAQVAAMVAAFALE
                     DYELLARSVDDRIAEPVRAGLLPGFAEAKAAALAAGALGSSISGSGPTAFALARGRES
                     AERIATAMAGAYRGRGTGCVVRVGPVDRSGATVTREGTAR"
     gene            1470..>2354
                     /gene="thrC"
                     /locus_tag="VF061_00825"
     CDS             1470..>2354
                     /gene="thrC"
                     /locus_tag="VF061_00825"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HEX6668066.1"
                     /translation="MKLHTDRPLSWQVCLSCGNELTETDPHSRCPRCGGLLEIAHRPP
                     DLTAPELMLRFTERRGRRAGVTPSGVWRFREVVLPSAEAVISHPEGNTPLLQRAALDR
                     WTGAEGLLLKHEGHNPTGSFKDRGMTVGVTQAVRIGARAVACASTGNTSASLAAYAAQ
                     AGLPALVLVPAGNVATGKLAQSLAYGARTLLVRGDFDDCLRLAREGAERLGLYLANSV
                     NPWRLEGQKTIVLELLQQLGWQPPDWIVLPAGNLGNTAAFGAALREARAAGLIDRLPR
                     LAAVQAAGAAPFAASFRGG"
BASE COUNT          274 a          873 c          897 g          310 t
ORIGIN      
        1 gggctacgtc ctcaccgaag tgggcgagcg ggtcctgttc tcccgcgcgg tccgcgccgc
       61 catgcggctc gggtacaccg agccggaccc gcgggaggat ctctcgggca tggacgtggg
      121 gcgcaaggcg ctcatcctcg cccgcctgct cggctatcgt ggagagctga gccgtgccgc
      181 ggtcgagtcg ctggtgccca aatgggccgc cgcgctcccg ttgccgcagt tcctcgagcg
      241 gctgcacgag ctggacgcgg ggtggaagcg acgagtggac gcggcccgcg cccagggcaa
      301 cgcactccgg tacgtagcca ccgtgacgcc gcggaacatc gccgtcggcc tccgggcggt
      361 gccgctctcc agtccgctgg cgtccctcaa gggctcggac aaccagctgg ttttcaccac
      421 cgcgcgctac aaggccaacc cgctggtgat ccgcgggccc ggcgccggcg ccgaggtgac
      481 ggcggccggt gtgctcaacg acatcctccg gctggcgggc gcgtgagcgg cgcggtcacc
      541 gcgttcgcgc ccgggagcat cgggaatgtc ggccccgggc tcgacatcct cggcctcgcc
      601 gtcgccgggg acggcgacgc cgtgcgcgcc gaatggctcg accggccggg cctgcggatc
      661 ctcgaccccg gtcatcccga gctcccgctg gaggcggacc ggcacgccgc cgggctcgcc
      721 gcgtccgccg tgctgaagcg ggtgggcgat gcggccgccg ggggccgggg catcggtctg
      781 acggtccgga aggggctgcc gctctcgggc ggccaggggg gcagcgccgc ctcggcggtc
      841 gccggcgcgg tgtcggtcaa cgcgctcctg ggccgacccc tggatcacgt gcagctgatc
      901 gaggcctgcc tcgacgccga ggaggcggtc gccgggcgac atgccgacaa catcgcccct
      961 tcgctcctcg gtgggctggt gctgatccgg tcgatggatc cgctcgacgt ggtccagctc
     1021 ccggtgccgg cggatctgca cgtcgtgctg gcgaagccgg agcagcggat gcgcaccgcc
     1081 gaagcacgcg cggtgctccc gcgcgaggtg cctcgggcgg tggcgctgca ccaggcggcc
     1141 caggtcgccg ccatggtggc cgcgttcgcc ctggaggact acgagctcct cgcccgctcg
     1201 gtggacgacc gcatcgcgga gccggtgcgc gcgggcctcc tcccgggttt cgccgaggcc
     1261 aaggccgccg cactcgcggc cggggcgctg ggaagctcca tctccggaag cgggcccacc
     1321 gccttcgcgc tggcgcgcgg gcgggagagc gccgagcgga tcgccaccgc gatggccggg
     1381 gcgtaccggg ggcgagggac cggttgcgtc gtccgggtgg ggccggtgga ccggagcggc
     1441 gccaccgtga cgcgcgaggg gacggcacgg tgaagctgca caccgaccgc cccttgagct
     1501 ggcaggtctg cctctcgtgc ggcaacgagc tcaccgagac cgatccccac tcgcgctgtc
     1561 cccgctgcgg ggggttgctc gagatcgccc accgaccgcc ggacctgacc gcacccgagc
     1621 tgatgctgcg gttcaccgag cgccgggggc ggcgtgccgg cgtgacgccc tcgggcgtgt
     1681 ggcggttccg cgaagtcgtc ctgccctcgg ccgaggcggt gatctcccat ccggagggga
     1741 acacgccgct gctgcagcgg gccgcgctcg atcggtggac cggcgccgag ggcctgctgc
     1801 tcaagcacga gggacacaac cccaccggct cgttcaagga ccggggcatg acggtcggcg
     1861 tcacccaggc ggtccgcatc ggcgcccggg cggtggcctg cgcctcgacc ggcaacacct
     1921 cggcgtcgct ggcggcctat gcggcgcagg cggggctgcc cgcgctggtg ctggtacccg
     1981 cgggcaacgt ggcgaccgga aagctcgcgc agtcgctcgc ctacggcgcg cgcaccctgc
     2041 tcgtgcgcgg cgacttcgac gactgcctgc gcctggcgcg cgagggtgcc gagcggctcg
     2101 gcctctacct ggccaactcg gtcaacccgt ggcggctcga ggggcagaag accatcgtcc
     2161 tcgagctgct gcagcagctc ggctggcagc cccccgactg gatcgtgctc ccggccggca
     2221 acctcgggaa cacggccgcc ttcggcgccg cgctgcgcga ggcgcgcgcg gcgggactca
     2281 tcgaccggtt gccgcgcctg gccgccgtgc aggccgccgg cgccgctccc ttcgcggcga
     2341 gctttcgcgg cggc
//
LOCUS       DASUYN010000043         2280 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_12822, whole genome shotgun sequence.
ACCESSION   DASUYN010000043 DASUYN010000000
VERSION     DASUYN010000043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2280)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2280)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2280
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12822"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..764)
                     /locus_tag="VF061_00830"
     CDS             complement(<1..764)
                     /locus_tag="VF061_00830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="neutral zinc metallopeptidase"
                     /protein_id="HEX6668067.1"
                     /translation="MRWSPGHRSANVEDRRGGGGRFIRGAGGMGAGTLIVLLVLSLIF
                     KRDFFSLVGGGGVPPTAETGAAPPAATTPEEERLASFVSFVLDDAQNTWRQLSSGAGG
                     QYRDAKLVLFRDAVQSACGFAESATGPFYCPADEKVYIDLGFYEELQQRFGAPGDFAQ
                     AYVLAHEIGHHVQNLLGTEAQVREARTRRADLANELSVRLELQADCYAGVWGASTSQR
                     NLLDPGDVEEGLAAAAAVGDDRLQGQMGGGVNPESFT"
     gene            924..1181
                     /locus_tag="VF061_00835"
     CDS             924..1181
                     /locus_tag="VF061_00835"
                     /inference="COORDINATES: protein motif:HMM:NF013630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEX6668068.1"
                     /translation="MPDPKEPLPDFSSVQSGGSSTAPSAPPQQGGDETYTVKKGDSLS
                     KIAKRVYGDAQQWRRIHEANRDIIDNPDLIHPGQVLKLPGA"
     gene            1207..1680
                     /locus_tag="VF061_00840"
     CDS             1207..1680
                     /locus_tag="VF061_00840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668069.1"
                     /translation="MTHVARALTAVALLAAVACKGRDTATPGTTNETGATGTAAAPDT
                     AVSKELTVAGVMIGKRLGENNLVIEPTFQFAPGDTIYVSVNTQGAPERAELSAIWRFQ
                     TGQTVDSSTQTIQPQGEENTEFHISNPKGWPVGTYNVTIYADGDSVDSKNFAVKK"
     gene            1706..2113
                     /locus_tag="VF061_00845"
     CDS             1706..2113
                     /locus_tag="VF061_00845"
                     /inference="COORDINATES: protein motif:HMM:NF013995.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EVE domain-containing protein"
                     /protein_id="HEX6668070.1"
                     /translation="MARHWVLKTEPSEYGFGDLVRDRRTRWEGVSNPVALKHLRSMLE
                     GDEALIYHTGNEKAVVGLARIASAPYPDPAEPKLVVVDVESGKPLPRAVPLAEIRAEP
                     AFAELGLVRVPRLSVVPLEPAQWKRLLAMGGLP"
BASE COUNT          381 a          801 c          779 g          319 t
ORIGIN      
        1 gtgaaggact ccggattgac gccgccgccc atctggccct gcaggcgatc gtcgccgacc
       61 gcggccgccg cggcgaggcc ttcctccacg tcgcccgggt cgagcaggtt gcgctggctc
      121 gtcgaggcgc cccacacgcc ggcgtagcag tcggcctgga gctccagcct caccgacagc
      181 tcgttcgcca ggtcggcccg ccgggtgcgc gcctcccgga cctgggcctc ggtcccgagc
      241 aggttctgca cgtggtgccc gatctcgtgc gccagcacgt aggcctgcgc gaagtcgccc
      301 ggggcgccga agcgctgctg cagctcctcg tagaacccga gatcgatgta caccttctcg
      361 tccgccgggc agtagaaggg gccggtggcg gactcggcga agccgcaggc cgactgcacc
      421 gcgtcgcgga acagcaccag cttggcgtcg cggtactgcc cacccgcgcc ggacgagagc
      481 tgccgccagg tattctgggc gtcgtccagc acgaaggaga cgaatgacgc cagccgctcc
      541 tcctccgggg tcgtggccgc cggcggcgca gcgcccgtct ccgccgtggg cggaacaccg
      601 ccgccgccga ccagggagaa gaaatcccgc ttgaagatca ggctgaggac cagcaggacg
      661 atgagcgtgc cggcacccat ccccccggcg ccgcggatga aacgcccgcc tcctccccga
      721 cgatcctcga cgttggcact gcgatgaccg ggcgaccagc gcatgagacg ctcctggcgg
      781 aatgagaagt cgggtccata atacggagcg ggaagccggc ccgcgagtcg ccggatgggg
      841 tcgttcgggt gacagctgtc acggtcccgg cgttcggatg ggagtatggt gggagtttcg
      901 catccttttc tccggaggct gtgatgcctg acccgaaaga gccacttccc gatttctcca
      961 gcgtccagag cggcggttcg tccaccgctc cctcggcgcc cccgcagcag ggcggcgacg
     1021 agacctacac ggtcaagaag ggcgacagcc tctcgaagat cgccaagcgg gtctatggag
     1081 acgcccagca gtggcgccgg atccacgagg cgaatcggga catcatcgac aaccccgatc
     1141 tcatccatcc cggccaggta ctgaagctgc ccggggcctg agcccaccca ctcggaggaa
     1201 gccaacatga cgcacgttgc acgggccctt accgcggtgg ccctgctggc cgcggtcgcc
     1261 tgcaagggac gggataccgc gactcccggg acgacgaacg agaccggcgc gaccgggacg
     1321 gcggccgccc ccgacaccgc ggtatcgaag gagctcacgg tggcgggcgt gatgatcggc
     1381 aagcgcctcg gcgagaacaa cctggtcatc gagccgacct tccagttcgc cccgggggac
     1441 acgatctacg tgtcggtgaa cacccagggg gcgccggagc gcgccgagct gtcggccatc
     1501 tggcggttcc agacgggaca gaccgtcgat tcctcgaccc agaccattca gccgcagggc
     1561 gaggagaaca ccgagttcca catctcgaac cccaagggct ggccggtggg cacctacaac
     1621 gtgaccatct atgccgatgg tgactcggtg gactccaaga acttcgcggt gaagaagtag
     1681 tccccggcga gccgacccgt cacccatggc ccgtcactgg gtgttgaaga ccgagccctc
     1741 cgagtacggg ttcggcgatc tggtacgcga tcggcggacc cgctgggagg gcgtcagcaa
     1801 tccggtcgcc ctcaagcacc tgcgctcgat gctcgagggc gacgaggccc tgatctatca
     1861 caccgggaac gagaaggccg tggtgggact ggcgcggatc gcgagcgccc cgtatccgga
     1921 tccggcggag ccgaagctgg tcgtggtgga tgtggagtcc ggcaagccgc tcccgcgggc
     1981 ggtcccattg gcggagatcc gtgccgagcc ggcgttcgcc gagctcggcc tggtgcgggt
     2041 cccgcggctc tcggtcgttc cgctcgagcc cgcgcagtgg aagcgcctgc tcgcgatggg
     2101 aggcctgccc tgacgtagga ttcgcctagc tggagaaccc gatgcccagg cggtcgagca
     2161 gccgcagcat ggcgctcggc cgtttccctt cgtccacccg ccggagcgca cccgtcaccc
     2221 gcgccaccgc ccacgaccgc agcggctcgg gcggaaacgg aaagggcttc cgccgcacca
//
LOCUS       DASUYN010000044         2248 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1556072, whole genome shotgun sequence.
ACCESSION   DASUYN010000044 DASUYN010000000
VERSION     DASUYN010000044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2248)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2248)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2248
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1556072"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..919)
                     /locus_tag="VF061_00850"
     CDS             complement(<1..919)
                     /locus_tag="VF061_00850"
                     /inference="COORDINATES: protein motif:HMM:NF013567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX6668071.1"
                     /translation="MTGSRSGGERLKVGIIGGGAITQVAHLPVLKKLKAIEVPAICDT
                     DLPKARALADRFGVKDAFDDIEDLLRFETLDAVVICSPNHLHESHILAALSAGLHVLV
                     EKPLAMSAASAQRIVRAAEKRGRMVMVGMNHRYRPDVQIVRSFVQGGELGSIESVRGS
                     WHVFRPSRAQLGWRQRRDQAGGGAMLDLGLSILDLGLWLGGNPAPVRVSASLDIGKDR
                     SVEQSGSAFVVCEKGMSLFVDVTWHHLGEGERFGVGVRGSKGTAAINPLTVWKELHGV
                     PVDVSPTGSGSRENAFTASYRAEWAHFVAA"
     gene            complement(929..>2248)
                     /locus_tag="VF061_00855"
     CDS             complement(929..>2248)
                     /locus_tag="VF061_00855"
                     /inference="COORDINATES: protein motif:HMM:TIGR02669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SpoIID/LytB domain-containing protein"
                     /protein_id="HEX6668072.1"
                     /translation="EAKRRLLLGAVLVIGAGLTAVASCAPEAPPEQPAPERPWPEPPL
                     PVGEPRAEHPPESAEPRLRIGLAVGAASATIGGDDELVITDPSGTRLAVIPAGEQWRV
                     VPSDGAIELQPPGRIGPPRSEMLTVLAAGPAAPVRVNGRTYRGVVEIVRDTGGITVVN
                     RLLLEAYLLGVVSAEMGRRSQAEFEALKAQAIVSRTYALRNLRRRASLGFDLHASVAD
                     QVYAGSGSETPEGREAVGMTRGQVLTYGGAPVDAFYYSTCGGQTADGTEAFRAASRPY
                     LRSAADVDEHGQAYCRISPRYRWREEWSGDALRATLRRTLPGAAGVRADRATEVRDVW
                     VAQRTPSGRVGRLGITLRADHVMVDGPAVRQVLRPASGDLLRSAAFTLTAARAGGEIT
                     RLVADGSGAGHGVGLCQWGAVGRSRAGQHYQRILEAYYPGATLQRLY"
BASE COUNT          310 a          866 c          774 g          298 t
ORIGIN      
        1 cggccgcgac gaaatgggcc cactccgcac ggtaggatgc ggtgaaggcg ttttcccggc
       61 tgcccgatcc ggtgggcgac acgtccaccg gcaccccgtg cagctccttc cacacggtga
      121 gcggattgat ggcggcggtg cccttgcttc cccggacgcc gaccccgaag cgctcgcctt
      181 cgcccaggtg atgccaggtc acgtccacga acagcgacat gcccttctcg cacaccacga
      241 aggcgctgcc ggattgctcc accgaccggt ccttcccgat gtcgaggctc gcgctcaccc
      301 gcacgggggc gggattcccg cccagccaga gccccaggtc gaggatggag agtccgaggt
      361 cgagcatcgc cccgccgccc gcctggtcgc gccgctgccg ccagccgagc tgcgcgcgac
      421 tgggccggaa gacgtgccag ctgccgcgta cgctctcgat gctgccgagc tcgcccccct
      481 gcacgaagct gcggacgatc tgcacatccg gccggtaccg gtgattcatc cccaccatga
      541 ccatccgccc gcgcttctcg gccgcgcgga cgatgcgctg cgcgctcgca gccgacatcg
      601 ccagcggctt ctcgaccagc acgtggagtc cggcggagag ggcggcgagg atgtgggact
      661 cgtggaggtg gttgggagag cagatcacga cggcgtcgag ggtctcgaag cggagcaggt
      721 cctcgatgtc gtcgaaggcg tccttcacgc cgaagcggtc agccagcgcc cgggccttgg
      781 gcaggtcggt atcgcagatc gccggtacct cgattgcctt cagcttcttg agcaccggca
      841 gatgggcgac ctgggtgatg gcgccgccac cgatgatccc gaccttcagt cgctcaccgc
      901 ccgaccggct gcccgtcatg ccacccccct agtagaggcg ctgcagtgtc gcgcccggat
      961 agtacgcctc gaggatgcgc tggtagtgct gaccggctcg cgagcgcccg accgctcccc
     1021 actggcagag cccgaccccg tgccccgctc cactgccatc cgccaccagc cgcgtgatct
     1081 ccccgccggc gcgcgcggcg gtgagggtga aggccgcgga ccgcaggaga tccccggagg
     1141 cggggcgaag cacctgtcgc accgccggcc catcgaccat cacatggtcc gcgcggagcg
     1201 tgatgccgag ccgccccacg cgacccgagg gggtgcgctg cgccacccag acgtcgcgta
     1261 cctcggtcgc ccggtccgcc cgcacaccgg ccgcccccgg cagcgtccgg cgcagggtcg
     1321 cccgcagcgc gtcgccgctc cactcctcgc gccagcgata cctgggggag atccggcagt
     1381 acgcctggcc gtgctcgtcc acgtccgccg ccgagcggag gtagggccgc gaggcggcac
     1441 ggaaggcctc ggtgccgtcg gccgtctggc cgccgcaggt ggagtagtag aatgcgtcga
     1501 ccggggcacc gccgtacgtc agcacctgtc cccgcgtcat ccccacggcc tcgcgccctt
     1561 cgggcgtctc cgagccgctg ccggcgtaga cctggtcggc cacactggcg tgcaggtcga
     1621 agcccagcga cgcccgccgg cgcaggttcc gcagcgcgta cgtgcgggag acgatcgcct
     1681 gcgccttgag cgcctcgaac tcggcctggc tgcgccggcc catctcggcg gacaccacgc
     1741 ccagcaggta ggcctccagc aacagccggt tcaccaccgt gatcccgccc gtgtcccgca
     1801 cgatctccac gacgccgcgg taggtccggc cgttcacccg taccggcgcc gcaggccccg
     1861 cggccaggac cgtaagcatc tcggagcgcg ggggcccgat ccggccgggc ggctggagct
     1921 cgatggctcc gtctgagggg acgacccgcc actgctcgcc ggcgggtatc accgccagcc
     1981 tggtgccgct cgggtcggtg atcacgagct cgtcatcgcc accgatggtc gcggaggcgg
     2041 ccccgaccgc gaggccgatc cgcagccggg gctcggccga ttccggggga tgctcggccc
     2101 gcggctcacc caccgggagc ggcggctcgg gccaaggccg ctccggagcg ggctgctccg
     2161 gcggcgcctc cggcgcgcag ctcgcgaccg ccgtcaggcc ggcgccgatc acgaggacgg
     2221 cgccgaggag caggcgccgc ttagcctc
//
LOCUS       DASUYN010000045         3472 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_895353, whole genome shotgun sequence.
ACCESSION   DASUYN010000045 DASUYN010000000
VERSION     DASUYN010000045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3472)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3472)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3472
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_895353"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..739
                     /locus_tag="VF061_00860"
     CDS             <1..739
                     /locus_tag="VF061_00860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD/SigA"
                     /protein_id="HEX6668073.1"
                     /translation="AQLGDEEAIQELARANLRFVISVAKKYQNRGVSLTDLIQEGNVG
                     LVTAARKFDPEQGVKFISYAVWWIRQSILASLARQGRTVRVPLNRTADLSRIIRTAET
                     LRQELRREPTPEEIGAATGLSLEVVQSLAALNTADVRLDAPLDPEGERSLIDRFVADE
                     QGDAEAQAMDKFLSEEIDRALTTLPPRDAKVLRLYFGLDGGREHTLEEIGGMLGVTRE
                     RVRQLRDRALKRLKDGDVGRALASFAA"
     gene            complement(752..1540)
                     /locus_tag="VF061_00865"
     CDS             complement(752..1540)
                     /locus_tag="VF061_00865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668074.1"
                     /translation="MTSLLAITALGFFLGMRHATDPDHVIAVTTILSRYRSATTAAVI
                     GALWGVGHTLTIMVVGAGIVLLGWVIPPRVGLSLELSVGVMLIVLGLMNLSGVLQRVT
                     ETVTPLHVHPHAHGDYVHSHAHGHQPETHPHRPEQTPLARLDRLLGRLGLYQVLRPLI
                     VGVIHGLAGSAAVALLVLTTIGNSGWAVVYLLVFGVGTIAGMMLITAGLAWPLAGATA
                     RFSGLPHRLRLASGVISLIAGLAIAYQIAAVDGLFGANPTWTPH"
     gene            complement(1537..2226)
                     /gene="hypB"
                     /locus_tag="VF061_00870"
     CDS             complement(1537..2226)
                     /gene="hypB"
                     /locus_tag="VF061_00870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016530 - metallochaperone activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase nickel incorporation protein HypB"
                     /protein_id="HEX6668075.1"
                     /translation="MTHEPRLVEVRRNILKQNDLVARQLRRRFHDAGVFAVSLVSSPG
                     AGKTMLLERTLTLLRERYRVAALVGDLATENDAARLARSRVPVRQITTGTVCHLEAAM
                     VQQALEGWALEELDFLFVENVGNLVCPASYDLGESLRLVIVSVTEGEDKPLKYPTIFN
                     TADVAVVSKTDLAEAVGFDWSAALRSIESVRPGMRAIGVSAKTGAGMADYLALLETGL
                     LASRGAATSAP"
     gene            complement(2223..2567)
                     /locus_tag="VF061_00875"
     CDS             complement(2223..2567)
                     /locus_tag="VF061_00875"
                     /inference="COORDINATES: protein motif:HMM:NF013334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation nickel metallochaperone
                     HypA"
                     /protein_id="HEX6668076.1"
                     /translation="MHELSIALSVVDAVREEADRHGGRVCAVHLRIGALAGVVPEALL
                     ASYEMACAETPLAGSRLVIEEVPVVVFCDVCDAERSLGGVQSFCCPECGTPTPRIERG
                     RELELIALEIEP"
     gene            complement(2543..>3472)
                     /locus_tag="VF061_00880"
     CDS             complement(2543..>3472)
                     /locus_tag="VF061_00880"
                     /inference="COORDINATES: protein motif:HMM:NF036810.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668077.1"
                     /translation="RTEELLVVCDAHPQYRSTALASAFPESEHVQVQHHRAHIASVLA
                     ERGEWDRRVIGLALDGTGYGDDGAIWGGELFVGSVRDGFDRVAHLRDAALVGGDAAAR
                     HPVQAAVGFLDQLEELPELADAPFDFPPAYLRSRRLLERRMRVFPTSSAGRLFDTAAA
                     LAGFIRPVSFEGQAAVWVEWLAHQAPEVEPYPCPLDGDAVDWRRLLDAMIADRRRRRD
                     VREIARAFHEGLAIGLAGMVTSLCRSRGIGTAVASGGVLQNRLLLDRLRSGLDREGVT
                     LWINHLVPPNDGGISLGQAALGALGPCTSSRSH"
BASE COUNT          538 a         1264 c         1223 g          447 t
ORIGIN      
        1 ggcgcagctc ggcgacgagg aggctatcca ggagctcgcg cgcgcgaacc tgcgcttcgt
       61 catcagcgtc gccaagaagt accagaaccg cggcgtgtcc ctcacggacc tgatccagga
      121 ggggaacgtc gggctggtca cggcggcgcg gaagttcgac cccgagcagg gggtgaagtt
      181 catctcctac gcggtctggt ggatccgcca gtcgatcctc gcctcgctgg cgcggcaggg
      241 ccgcaccgtc cgggtccccc tcaaccgcac cgccgacctc tcccggatca ttcgcaccgc
      301 cgagacgctg cgccaggagc tccggcgaga gcccaccccg gaggagatcg gcgcggccac
      361 cgggctgtcg ctcgaggtgg tccagtccct cgccgcgctc aacacggcgg acgtgcggct
      421 cgacgcgccg ctcgaccccg agggggaacg ctcgctcatc gaccgcttcg tggcggacga
      481 gcagggcgac gccgaggccc aggcgatgga caagtttctc tcggaagaga tcgaccgcgc
      541 gctgacgacg ctgccgccgc gcgacgcgaa ggtgctgcgg ctctacttcg gcctcgacgg
      601 tgggcgggag cacaccctgg aggagatcgg cgggatgctg ggggtcaccc gggagcgagt
      661 ccgccagctt cgcgatcgtg cgctcaagcg gctcaaggat ggcgacgtgg gacgcgccct
      721 cgcgagcttc gcggcctgag cccggcccgc gctagtgcgg ggtccaggtg ggattggccc
      781 cgaagagtcc gtccaccgcg gcgatctgat aggcgatcgc cagccccgcg atcagactga
      841 tcacccccga ggccagccgc agccggtggg gcagcccgga gaaccgagcc gtggccccgg
      901 ccaacggcca cgccagcccg gccgtgatga gcatcatccc cgcgatggtc ccgaccccga
      961 acaccagcag gtagacgacg gcccagccac tgttgccgat ggtggtgagc accaggagcg
     1021 ccacggcggc ggagcccgcc agcccgtgga tcaccccgac gatcagcggt cgcagcacct
     1081 gatagagtcc cagccggccg agcagccgat ccagccgggc gagtggcgtc tgctccggcc
     1141 ggtgggggtg ggtctcgggc tggtgcccgt gggcgtggga gtgcacatag tcgccgtgcg
     1201 cgtgggggtg gacgtgcagc ggtgtcaccg tttcggtcac ccgctggagc acgccgctca
     1261 ggttcatgag gccgagcacg atcagcatta cgccgaccga gagctcgagc gagagaccga
     1321 cccgtggcgg gatgacccac ccgagcagca cgatgccggc gcccaccacc atgatggtca
     1381 gcgtgtgccc cacgccccag agcgcgccga ttacggccgc cgtcgtcgcg ctgcggtagc
     1441 gggagaggat ggtggtcacc gcgatcacgt ggtcggggtc ggtggcgtgg cgcatgccga
     1501 ggaagaatcc cagggcggtg atggcgagga ggctggtcat ggcgcgctcg tggcggcccc
     1561 gcggctcgcc agcagccccg tttccagcag cgccaggtag tcggccatgc cggccccggt
     1621 cttcgcggag acgccaatcg cgcgcatgcc cggccgcacc gactcgatgc tgcgaagcgc
     1681 cgcgctccag tcgaacccga ccgcctccgc cagatcggtc ttggagacca cggccacgtc
     1741 cgcggtattg aagatggtgg gatacttgag cggcttgtcc tcgccctcgg tcacggagac
     1801 gatcaccagg cgcaggctct cccccagatc gtaggaggcg gggcacacga ggttgccgac
     1861 gttctccacg aagaggaaat ccagctcctc gagcgcccag ccctccagcg cctgctggac
     1921 catcgcggcc tccaggtgac acaccgtccc ggtcgtgatc tgccgcaccg gaacccggct
     1981 tcgtgccagc cgggccgcgt cgttctcggt cgccaggtcg cccaccagcg cggcgacgcg
     2041 atagcgctcc cggagcagcg tgagcgtgcg ctccagcagc atggtcttgc cggcgcccgg
     2101 gctggacacg agcgagaccg cgaacacccc ggcgtcgtgg aaccgccgcc ggagctgccg
     2161 cgccaccagg tcgttctgct tgaggatgtt ccggcggact tcgaccagtc tcggctcgtg
     2221 ggtcatggct cgatctccag ggcgatcagc tccagctccc ggccgcgctc gatgcgcggc
     2281 gtcggcgtgc cgcactccgg acagcagaac gactgcacgc ctcccagcga gcgctccgcg
     2341 tcgcagacgt cgcagaagac caccaccggc acctcctcga tcaccaggcg ggagcccgcc
     2401 agcggcgtct cggcgcaggc catctcgtag gaagcgagca gggcctcggg caccaccccc
     2461 gcgagggcac cgattctcag gtgcacggcg cacaccctgc cgccgtgccg gtcggcctcc
     2521 tcccggacgg cgtccaccac gctcagtgcg atcgagagct cgtgcatggc cccagcgcgc
     2581 cgagcgcggc ctgtcccagg ctgatgccgc cgtcgttggg cggaaccagg tgattgatcc
     2641 acagcgtgac gccctcccgg tccagcccgg accgcaggcg gtcgagcagc agccggttct
     2701 ggaggacgcc ccccgacgcg accgccgtgc cgatcccgcg ggaccggcag agcgacgtca
     2761 ccatgcccgc cagcccgatc gccaggcctt cgtgaaaggc gcgggcgatc tcccggacat
     2821 cccgccgtcg gcgccggtcc gcgatcatcg cgtcgagcag ccggcgccag tccaccgcgt
     2881 ccccgtccag cggacacgga tacggctcca cctccggcgc ctggtgggcc agccactcga
     2941 cccacacggc cgcctggccc tcaaagctga ccggtcggat gaagcccgcg agcgcggccg
     3001 cggtgtcaaa caggcggccg gcggaggagg tgggaaacac gcgcatccgt cgctcgagca
     3061 gacgccgaga cctgaggtac gccggcggaa agtcgaacgg ggcatcggcc agttcgggca
     3121 gctcctcgag ctgatccagg aacccgacgg cggcctggac cggatgccgc gcggccgcgt
     3181 cgccgccgac cagcgcggcg tcgcgcagat gggcgacgcg gtcgaagccg tcgcggacgc
     3241 tgcccacgaa gagctcgccg ccccagatgg cgccgtcgtc accgtacccg gtgccgtcga
     3301 gcgccaggcc gatcacccgt ctgtcccact cgccccgctc ggccaggacc gaggcgatgt
     3361 gggcgcggtg gtgctggacc tggacgtgtt cggactcggg gaaggccgag gcgagcgcgg
     3421 tcgagcggta ctgggggtgg gcgtcgcaca ccaccagcag ctcctcggtg cg
//
LOCUS       DASUYN010000046         2313 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_13292, whole genome shotgun sequence.
ACCESSION   DASUYN010000046 DASUYN010000000
VERSION     DASUYN010000046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2313)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2313)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2313
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13292"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..509)
                     /locus_tag="VF061_00885"
     CDS             complement(<1..509)
                     /locus_tag="VF061_00885"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEX6668078.1"
                     /translation="MTSRSDVPPSIETDDGSILTPDVDARALDPEPAPSGEPPSVTKL
                     ASLLGEGADARHVALVGLFLLAIFYTLHLAQALFLPIVLAILLDFLLSPLVRALRKLG
                     LPEPAGAGIVMLGLVATLFLGLYYLSGPAARYISLAPQSIERVREKMESMRGSVEQVT
                     EAAEQVERVA"
     gene            631..1377
                     /locus_tag="VF061_00890"
     CDS             631..1377
                     /locus_tag="VF061_00890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEX6668079.1"
                     /translation="MALLWVSLVSLWTWLVLVVCVLLWLPLMLVVRLATLGDPGRYWV
                     GYLFRQIGVATARLTPYWKFSCRGVMPAEPRNPYVVVSNHESFTDILLISHLPWEMKW
                     LSKAELFRIPVMGWLMHLAGDVPVKRGFGPSAIEAMAKCREILARKVSVMIFPEGTRS
                     PTSELLPFKDGAFRLAIDAGVPILPLALHGTRTALRKHDWRIGRSTAVVEVLAPVETA
                     GLTPDDLPALKQQVRGTIVAARDRLARELG"
     gene            1374..1760
                     /locus_tag="VF061_00895"
     CDS             1374..1760
                     /locus_tag="VF061_00895"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEX6668080.1"
                     /translation="MSRSRPRGSAVPLLWLLAACEPRPATVAGFDPGPVPAELAEGAR
                     RYDRNCRLCHGPLGTGSEAGPPLVHKIYEPSHHADAAFQLAITRGVRAHHWRFGDMPP
                     MPEMDPAEIAAVTAYVRWLQRKAGIQ"
     gene            complement(1767..>2313)
                     /locus_tag="VF061_00900"
     CDS             complement(1767..>2313)
                     /locus_tag="VF061_00900"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX6668081.1"
                     /translation="PTLAPSPVPLLSALPVVGPGLFAQPAPTYIALLAVPVVWWFLFR
                     TRAGLAVRATGEAAAVARANGVRTRLVRGAATVVSGGFAGLAGATLVLAQVGTFAERM
                     TAGRGYVAIAIVVLGRWQPVAVAIASLVFGGAMALQFLFQTLGLGVPYQIFLMLPYGL
                     ALLALAGVVGRVRAPADLGRA"
BASE COUNT          344 a          856 c          794 g          319 t
ORIGIN      
        1 gccacgcgct ccacctgctc cgcggcctcg gtcacctgct ccaccgaccc gcgcatgctc
       61 tccatctttt cccgcacccg ctcgatgctc tggggcgcca gcgagatgta ccgcgcggcg
      121 gggcccgaca ggtagtagag ccccaggaac agcgtggcca cgaggcccag catcacgatt
      181 cccgcaccgg ccggctccgg caggcccagc ttgcgcaggg cccgcaccag cggactcagg
      241 aggaagtcga gcaggatcgc caggacgatc ggcaggaaca gcgcctgggc gagatggagg
      301 gtgtagaaga tggcgagtag gaagagaccg accagggcga cgtgtcgtgc gtccgctccc
      361 tcgcccagca ggctggccag cttggtgacg ctgggcggct cgcccgaggg tgcgggctcg
      421 gggtcgagcg cccgcgcgtc gacgtcgggc gtgaggatgg agccgtcgtc ggtctcgatc
      481 gacggcggca cgtcggaacg gctcgtcatg ggtctctcgt gaaggtggcg gccccttgtc
      541 ccgccccgcg agcccgggct aaggttagcc cgccccgcgc cggcggtctg tgcgccagca
      601 cacgggcatc cctctcaacc gcttccgggc atggcgcttc tctgggtctc gctggtctcg
      661 ctctggacat ggctcgtcct cgtggtctgc gtgctgctct ggctgccgct gatgctggtc
      721 gtgcgcctgg ccaccctggg cgacccgggc cgctactggg tgggctatct ctttcgccag
      781 atcggcgtgg ccaccgcccg gctcacgccc tactggaagt tcagctgccg cggcgtcatg
      841 ccggcggagc cgcgaaaccc ctacgtggtg gtgtccaacc acgagtcgtt caccgacatc
      901 ctcctcatca gccacctgcc ctgggagatg aagtggctct ccaaggccga gctgttccgc
      961 atcccggtca tggggtggct catgcatctc gcaggcgacg tgccggtgaa gcgcggcttc
     1021 ggaccgagcg cgatcgaagc gatggcgaag tgccgggaga tcctggcgcg gaaggtgtcg
     1081 gtgatgatct tccccgaggg cacgcgatcg ccgaccagcg agctgctgcc gttcaaggac
     1141 ggcgccttcc ggctcgcgat cgacgccggc gtgccgatcc ttccgctcgc cctgcacggc
     1201 acccgcaccg cgctccgcaa gcacgactgg cgaatcgggc gctccaccgc ggtcgtggag
     1261 gtgctggcgc cggtggagac cgccggtctg acgccggacg acctgcccgc gctgaagcag
     1321 caggtgcgcg gtacgatcgt ggcggcacgc gatcgcctcg cccgggagct cgggtgagcc
     1381 gctcgcgccc ccgcgggtcg gccgtcccgc tcctgtggct gctggcggcc tgcgagccca
     1441 ggccggcgac ggtcgcgggg ttcgatcccg ggccggtccc cgccgagctc gccgaggggg
     1501 cgcgacggta cgaccgcaac tgccggctct gccacggccc tctgggcacc ggctccgaag
     1561 ccggcccgcc tctggtccac aagatctacg agccgagcca ccacgccgat gccgcgttcc
     1621 agctcgcgat cacgaggggc gtgcgcgccc atcattggcg cttcggcgac atgcccccga
     1681 tgccggagat ggatccggcc gagatcgctg cggtgacggc ctacgtccgc tggctgcagc
     1741 gaaaagccgg cattcagtag catcggtcac gcccttccca gatccgccgg cgcccgcacc
     1801 cttccgacca ccccggcgag cgccagcagc gccagcccgt agggcagcat caggaagatc
     1861 tgatagggga cgccgagccc cagcgtctgg aacaggaact ggagcgccat cgcgcccccg
     1921 aacaccagcg aggcgatcgc tacggctacc ggctgccagc ggcccagcac cacgatcgcg
     1981 attgccacgt atccccggcc cgccgtcatc cgctccgcaa aggttcccac ctgggccaac
     2041 accagcgtcg cgccggccag gcccgcgaaa ccgccgctca ccaccgtagc cgcgccacgc
     2101 accagtcggg tacgcacgcc gttcgcacgg gcgacggcgg cggcttcacc cgtggcccgg
     2161 accgcgagac ccgccctggt gcggaagaga aaccaccaca ccaccggcac cgcgagcaac
     2221 gcgatgtacg tcggcgccgg ctgagcgaag agaccggggc cgaccaccgg cagggccgag
     2281 agcagcggga ccggactcgg ggcgagcgtc ggc
//
LOCUS       DASUYN010000047         2237 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_455278, whole genome shotgun sequence.
ACCESSION   DASUYN010000047 DASUYN010000000
VERSION     DASUYN010000047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2237)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2237)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2237
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_455278"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..613
                     /locus_tag="VF061_00905"
     CDS             <1..613
                     /locus_tag="VF061_00905"
                     /inference="COORDINATES: protein motif:HMM:NF015344.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015232 - heme transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="heme exporter protein CcmB"
                     /protein_id="HEX6668082.1"
                     /translation="TALLSAVVFAALVLVIFNFARDPTAVAAVDLAPSVLWVTFALAA
                     MVALNRAFMVERENAALDGLLLAPVPRGAVFLGKLVANLAFVGTVEGVALPLFVLFFN
                     VDLGHALPGLVGVTLLATIGFVAVGTIFSAMAVRTRFAELLLPVLLLPFMVPPLIGAV
                     QVTARLLAGRPLSEMLGWLRLLALYDVVFVTLCTMAFASVVDE"
     gene            610..1305
                     /gene="ccsA"
                     /locus_tag="VF061_00910"
     CDS             610..1305
                     /gene="ccsA"
                     /locus_tag="VF061_00910"
                     /inference="COORDINATES: protein motif:HMM:NF013725.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HEX6668083.1"
                     /translation="MSATAARAYVRAGTAITLVAFLALAGVYVLALEFTPVELRQGPA
                     QKIFYLHVPAAWNALIAFSVVGLCGGLFLWLNDRRLDRLAESSAEVGVALGVVMLTTG
                     PIWAKPIWGTWWTWDARLTLTLFLFFLFVGYLALRASLHDPGERARFSAVVGVLGLLL
                     VPFIHLSVYLFRTLHPQPVVLKPSAPSMPPEMLRTLLVSALVFLVLYIGLVTIRYGLA
                     LAEEAREGEPDAP"
     gene            1295..1444
                     /locus_tag="VF061_00915"
     CDS             1295..1444
                     /locus_tag="VF061_00915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668084.1"
                     /translation="MPPENSGYMVAAYVVTAVVLVGYAVLLVRRARRALGRAGREAAR
                     DGREQ"
     gene            complement(1480..2166)
                     /locus_tag="VF061_00920"
     CDS             complement(1480..2166)
                     /locus_tag="VF061_00920"
                     /inference="COORDINATES: protein motif:HMM:NF012455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin"
                     /protein_id="HEX6668085.1"
                     /translation="MPSLFRRSLAELLGTFALVFIGAGSVASKYFPEATYGIFGVAVA
                     HGLVLAVMVTAMMGISGGHLNPAVTLGLVAVRRTDLRSGLAYIVAQLLGGVLAALLIK
                     VVYPIGVVRPISLGTPTIANTVQFHQAMILEGVMAFFLVSAVFGTCINPAAPRLGGLG
                     VGLALIFDILVGGPLTGAAVNPARAFGPALVSGQWVGHLVYWVGPIVGGVLAALLWEY
                     VLLKDVRRES"
BASE COUNT          309 a          769 c          785 g          374 t
ORIGIN      
        1 cacggcgctc ctctcggccg tggtcttcgc cgcgctggtg ctggtgatct tcaacttcgc
       61 gcgggacccc accgcggtgg ccgcggtgga cctcgcaccc agcgttctgt gggtgacctt
      121 cgccctcgcg gcgatggtgg cgctcaaccg ggcgttcatg gtcgagcggg agaacgcggc
      181 gctcgacggc ctgctgctcg cccccgtgcc ccggggcgcg gtgttcctgg gaaagctggt
      241 cgccaacctc gcgttcgtcg gcaccgtcga gggggtcgcg ctgccgctct tcgtcctctt
      301 cttcaacgtg gacctggggc acgcgctgcc cggcctggtg ggcgtgaccc tgctcgcgac
      361 cataggattc gtcgcggtcg ggaccatctt cagcgcgatg gccgtgcgca cccgcttcgc
      421 cgagctgctg ctgccggtgc tgctgctgcc cttcatggtc cccccgctca tcggggcggt
      481 ccaggtgacg gcccggctgc tcgccgggcg tccgttgagc gagatgctgg ggtggcttag
      541 gttactcgcc ctctacgacg tggtgttcgt gaccctctgc acgatggcct tcgcttcggt
      601 ggtggacgaa tgagcgcaac agccgcccgc gcctacgtgc gcgcggggac cgcgatcacg
      661 ctggtcgcgt tcctggcgct cgcgggcgtg tacgtgctcg cgctggagtt caccccggtc
      721 gagctgcgcc aggggccggc gcagaagatc ttctatctcc acgttccggc cgcatggaac
      781 gccctgatcg cgttctcggt cgtagggctc tgcggcgggc tctttctctg gctcaacgat
      841 cgccggctcg atcgcctggc ggagtcgtcg gcggaggtcg gcgtcgcgct cggcgtggtg
      901 atgctcacca ccggaccgat ctgggccaag cccatctggg gcacctggtg gacctgggac
      961 gcccggctca ccctgaccct gttcctgttc ttcctcttcg tcggctacct agcgctccgc
     1021 gcctcgctgc acgacccggg cgagcgggcg cgattcagcg ccgtggtggg tgtcctcggg
     1081 ctgctgctgg tgcccttcat ccacctcagc gtctacctgt tccgcacgct gcatccgcag
     1141 cccgtggtcc tgaagccgag cgcgccctcg atgccgcccg agatgctgcg gacgctgctg
     1201 gtctccgcgc tggtcttcct ggtgctctat atcggactgg tcaccatccg gtatggcctg
     1261 gcgctggcgg aagaggcgcg ggagggagag cccgatgccc cctgagaaca gcggatacat
     1321 ggtggccgcg tacgtcgtga ccgcggtcgt gctggtcggg tatgccgtcc tgctggtgcg
     1381 gcgggcgagg cgggccctgg gaagggcggg aagagaggca gcgcgggacg ggcgggaaca
     1441 gtgaaaaggg cgttcacgcc gttgacgccc tggtcgtact cagctctccc gccgcacgtc
     1501 cttcagcagc acgtactccc acagcagcgc cgccagcacg ccgccaacga tcggtcccac
     1561 ccaatagacc aggtgcccga cccactgtcc cgagaccagg gcggggccga aggcgcgcgc
     1621 ggggttcacg gccgcgccgg tgagggggcc gccgaccagg atgtcgaaga tcagtgccag
     1681 accgacgccc agcccgccga ggcgcggcgc ggcggggttg atgcaggtgc cgaagacggc
     1741 ggagaccagg aagaaggcca tgacgccttc caggatcatc gcctggtgga actgcaccgt
     1801 gttggcgatg gtcggcgtgc cgagcgagat ggggcgcacc acgccgatcg gatagaccac
     1861 cttgatcagc agcgccgcca gcaccccgcc cagcagctgc gccacgatgt aggccagtcc
     1921 gctccggagg tcggtccgcc ggacggccac caggccgagc gtcacggcgg ggttgagatg
     1981 tcctcccgag atgcccatca tcgcggtgac catgacggcc agcaccaggc cgtgcgccac
     2041 ggccacaccg aagatgccgt aggtggcctc ggggaagtac ttgctggcca ccgagccggc
     2101 gccgatgaag accagcgcga aggtgcccag cagctcggcg agcgagcggc gaaacaggga
     2161 aggcattccg ttactccgta ggtgaggtcg cgaatcgggc gcgactctag acgtcagcct
     2221 tccgaaacac cagcgcc
//
LOCUS       DASUYN010000048         7845 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_234879, whole genome shotgun sequence.
ACCESSION   DASUYN010000048 DASUYN010000000
VERSION     DASUYN010000048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7845)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7845)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7845
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234879"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..479
                     /locus_tag="VF061_00925"
     CDS             <1..479
                     /locus_tag="VF061_00925"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: protein motif:HMM:NF039343.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004725 - protein tyrosine phosphatase
                     activity [Evidence IEA];
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_process: GO:0045227 - capsule polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CpsB/CapC family capsule biosynthesis tyrosine
                     phosphatase"
                     /protein_id="HEX6668086.1"
                     /translation="TIGGTRYILVEFPRMVAFDVVTTALGRVVDTGLLPLLAHPERYT
                     CCSPEAVARWREIGACMQVDATTLLSTQSRGQRARTLVSAGLADIIAADNHGDDRSIG
                     TGRQFLESQDGAEQADLLTRVNPRAILDDAALTPVPPLEIRRSWMQKIRQLLEGGQ"
     gene            476..1051
                     /locus_tag="VF061_00930"
     CDS             476..1051
                     /locus_tag="VF061_00930"
                     /inference="COORDINATES: protein motif:HMM:NF024969.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA];
                     GO_process: GO:1901135 - carbohydrate derivative metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HEX6668087.1"
                     /translation="MTAAAVRAGLEALARSVLDSAALADRVAGAARRYADTLRSGATL
                     FFCGNGGSAADAQHVATEYVVRYSAMRRPLAAVALTTDSSLLTAAANDLGFEQVFARQ
                     VEALCRKGDLLVLHSTSGESPNLLAAAQAARERAVATIAFLGRGGGALAPLVDDAIVV
                     PSDDPGRIQVIHLALEHLIVELVEAELTRGA"
     gene            1048..1800
                     /locus_tag="VF061_00935"
     CDS             1048..1800
                     /locus_tag="VF061_00935"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX6668088.1"
                     /translation="MIALDGRTALVTGGSRGIGAAVVGLLARAGADVAIGYRSRTGEA
                     EAVAAQVRKLGRRALTVAGDLAEPAASERLAAEVREAFGRLDIFVANAGIWPPEDAPL
                     ARLSADRWHETIAANLDAVYHSTRAALGLMGPGGRIVLVSSTAGQRGEAGHADYAATK
                     GALIALTKSLAIECAPDILVNCVAPGWVDTEMAAPAYGGGEKARIAAGIPLRRIPTAE
                     QIAGPIVFLCSDLASHVTGEILNVNGGSVLCG"
     gene            1805..2755
                     /locus_tag="VF061_00940"
     CDS             1805..2755
                     /locus_tag="VF061_00940"
                     /inference="COORDINATES: protein motif:HMM:NF012913.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HEX6668089.1"
                     /translation="MIHILFTGGTISMQRDAAAGGNVPAHGGEALMRLAPGIERIAPV
                     RIEDWARLPACHFDQARLWALRERVRQVAESGEATGVVITHGTDILEETAYLLDRTLH
                     PRIPVAITGAMRTSSDDGWDGPRNLRDAVTVAASPASAGRGTMVVFAGQVFPGRTAVK
                     SHATGVEAFAAPHGGPIGRVADGGATFTAPPPRDGAPILPPSLHARVAHVPAVVGDQG
                     AMLDLARGEHDGVVVEAFGSGNMPPGAVPAVRRWIEAGKSVVLATRCWWGQVTPLYAF
                     EGGGARTTAMGAIPAGPRTPSQARMELVIALSAGVPYGSP"
     gene            2752..3936
                     /locus_tag="VF061_00945"
     CDS             2752..3936
                     /locus_tag="VF061_00945"
                     /inference="COORDINATES: protein motif:HMM:NF013871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CCA tRNA nucleotidyltransferase"
                     /protein_id="HEX6668090.1"
                     /translation="MSFPPSVPVPEEVLEIARVLERSGHEAWCVGGALRDTLLGDPHS
                     DFDLATTAPPVEVQRLFRRTAPIGVEHGTVGVIDRNRVLHEVTTFRRDVRTDGRHAVV
                     EYGVSLDEDLARRDFTINAIAYHPLRHEWRDPHGGERDLEAGVVRAVGDPAARFREDY
                     LRILRALRFAARFGFSIERGTWEAAKAASDGLGRLSAERVRDEWFKGIRTARDLGTLV
                     RLWREAGAAAVWLPELRSAAEDLPSPQLSPPPRDPVLVTALLASDPAGLLRRLRASNA
                     EIARAEALASGPQQPAGGDEVAVRRWLAAVGAAADDLVEVYRLRQGAAAPWLAIMRAI
                     RERGDPLTRGSLAVGGHELEAIGIRGREVGETLALLLDRVLEDPAANTRERLLQLARE
                     RQ"
     gene            3933..4649
                     /locus_tag="VF061_00950"
     CDS             3933..4649
                     /locus_tag="VF061_00950"
                     /inference="COORDINATES: protein motif:HMM:NF014582.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ZIP family metal transporter"
                     /protein_id="HEX6668091.1"
                     /translation="MTPLWFALAAALGNLAGAFAVVRSLRRELRVIDACLAFGAGFML
                     AVAVLGVLPEVLRDGEGGALYVLGGYLAVHLAQHVFTPHFHFGEETHRVSPSAGVSAL
                     LGLMLHTFFDGVAIASGFLVSGELGLLLFLAVLLHKLPEGVTIASVMVAGGQSRNRAL
                     GAAAVLGLATVLGVVLTEVVAPLARHGLAISAGVTIYVAASNLVPEFQAKRGWLSALA
                     FFGGAVGFFLTERLLGMWMR"
     gene            4667..6022
                     /locus_tag="VF061_00955"
     CDS             4667..6022
                     /locus_tag="VF061_00955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HEX6668092.1"
                     /translation="MARKRGAEQGESLFSATREGQPLAARMRPRTLDEFVGQEHLLAP
                     GKPLREAIERGVPGSMIYWGPPGSGKTTLAHLVASSTARVFVPFSAVSEGVPRIREIV
                     GQARARLESGGSQTILFVDEIHRLNKAQQDSLLPPSEDGTITLIGATTENPSFEINGA
                     LLSRTRVFVLQPLTAGHVAELLRRALEDGERGLGAMELAVEPVAVESIAVEADGDARR
                     ALTVLEAAAAHVGPGGTITTEVAREAMQKRFARYDKAGEEHYNLLSAYHTSLRGSDPQ
                     GALYWMARMIDGGEDPMTLFRRAIAMAAEDIGLADPNALVMAVAARDAFHMLGPPEGY
                     LPLAEMTIYLATAPKSNSAKVALGEAMAAAQETPAAPVPMHIRNAPTGLMKELGYGKG
                     YQYAHDSPDAYLPQEYLPDELRGKAFYTPGGFGYEKRVAERMAWWERRKAEGEGEGEP
                     G"
     gene            6138..6626
                     /locus_tag="VF061_00960"
     CDS             6138..6626
                     /locus_tag="VF061_00960"
                     /inference="COORDINATES: protein motif:HMM:NF015147.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LEA type 2 family protein"
                     /protein_id="HEX6668093.1"
                     /translation="MRLGAGAGAVLLAAVLAGCAGLGNALRDPEIELERVRVRDVGVR
                     GGELELQLGFENPNPFDLRGTEIVLGFDVEGSHVGDVRYADDFSLERGGRTSLALPLR
                     FEWAGVGSALRTALSSGEIPYQMKGQLTIQTPWGAQSVPFTRDGRVPLSRAATLPAAT
                     SR"
     gene            6735..>7845
                     /gene="hflX"
                     /locus_tag="VF061_00965"
     CDS             6735..>7845
                     /gene="hflX"
                     /locus_tag="VF061_00965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HEX6668094.1"
                     /translation="MTDHLEELTSLVDTAGAEVVGRISQQITAPNPATLIGEGKVEEV
                     ARAVTESGASLVIFDEELSPVQGANLERALQVRVMDRPEVILDIFSTRARSHEAKLQV
                     ELAQLEYLLPRLTRMWTHLSRIRGGIGLRGPGETQLETDRRIIRRRIQGLKAKLQSVE
                     RHRENLRAGRDPMLGVALVGYTNAGKSSILRALSGQHEIFVEDRLFATLDTLTREVDL
                     GEGQRARVTDTVGFIRKLPHHLVASFRATLEEARGADLLLHVVDASHHDWEGQMRVVE
                     RVLADLELNDRPLLPVFNKMDLVADPAGFANRVRELYPGALTVSTMRTSGLAPLKAVL
                     RERERAGRQVVRVRLAVSDGARLAALYREGEVLSRQ"
BASE COUNT         1053 a         2755 c         2969 g         1068 t
ORIGIN      
        1 acaccatcgg cgggacgcgt tacatcctgg tcgagtttcc ccggatggtt gccttcgacg
       61 tcgtgaccac cgcgctgggc cgcgtggtgg acaccggcct gctgccgctg ctggcgcacc
      121 ccgagcgcta tacctgctgc agcccggagg cggtggcccg ctggcgcgag atcggcgcgt
      181 gcatgcaggt ggacgcgacc acccttctct cgacccagtc gcggggccag cgcgcgcgga
      241 ccctggtcag cgcgggtctc gccgacatca tcgcggccga caaccacggc gacgatcgga
      301 gcatcggcac cgggcggcag ttcctcgagt cgcaggacgg cgcggagcag gccgacctgc
      361 tcacgcgggt gaacccgcgc gcgatcctgg acgacgcggc gctgacgccc gtgcccccgc
      421 tggagatccg gcggagctgg atgcagaaga tccgccagct gctggagggc gggcagtgac
      481 cgccgccgcg gtccgcgcgg gcctcgaggc gctggcgcgc tcggtgctcg acagcgcggc
      541 gctggccgac cgcgtggccg gggcggcccg gcggtacgcc gacacgctgc gctcgggcgc
      601 caccctcttc ttctgcggca acggcggcag cgcggccgac gcgcagcacg tcgccaccga
      661 gtacgtagtg cgctactcgg ccatgcggcg gccgctcgcc gcggtcgccc tcacgaccga
      721 ttcctcgctc ctcaccgccg cggccaacga cctcggcttc gagcaagtgt tcgcccggca
      781 ggtggaggcc ctctgccgga agggcgacct cctggtgctg cacagcacca gcggcgagag
      841 cccgaacctg ctggcggctg cccaggccgc ccgcgagcgc gcggtggcga ccatcgcctt
      901 cctcggacgc ggcggcggcg cgctggcgcc gctggtggac gacgccatcg tggtgccctc
      961 ggacgacccg gggcggatcc aggtgattca cctggcgctc gagcacctga tcgtggagct
     1021 ggtggaggcc gagctgaccc gcggcgcatg atcgccctgg acggaaggac ggcgctggtc
     1081 accggcggca gccgcgggat cggagcggcc gtcgtcggcc tgctcgcgcg cgcgggggcc
     1141 gacgtggcga tcgggtaccg cagccgtacc ggggaggcgg aggcggtggc ggcgcaggtg
     1201 aggaaactcg gccggcgggc cctcacggtg gccggcgacc tcgccgagcc cgccgcgtcg
     1261 gagcgcctgg ccgccgaggt ccgggaagcc ttcggccggc tggacatctt cgtcgccaac
     1321 gccggcatct ggccgccgga ggatgccccg ctggccaggc tgtcggccga ccggtggcac
     1381 gagaccatcg ccgccaacct cgacgcggtc tatcactcca cccgtgccgc cctcggcctg
     1441 atgggccccg gtgggcggat cgtgctggtc tccagcaccg ccggccagcg gggcgaggcg
     1501 ggccacgccg actatgccgc caccaagggc gcgctgatcg cgctcaccaa gtcgctcgcg
     1561 atcgagtgcg cgccggacat cctggtcaac tgtgtggcgc ccggctgggt ggacaccgag
     1621 atggcggcgc cggcgtacgg cggcggggag aaggcgcgca tcgccgccgg cattccactg
     1681 cggcgcattc ccaccgccga gcagatcgcg gggccgatcg tcttcctctg cagcgacctg
     1741 gcgagtcacg tcacgggcga gatcctgaac gtgaacggcg gcagcgtcct gtgcggatga
     1801 gcccatgatc cacatcctct tcaccggcgg gacgatctcg atgcagcgtg atgccgcggc
     1861 cggcggcaac gtgccggcgc acgggggcga agcgctcatg cggctggccc ccggcatcga
     1921 gcggatcgcg ccggtccgga tcgaggactg ggcccgtctg ccggcgtgcc acttcgacca
     1981 ggcgcggctc tgggcgctgc gcgagcgggt gcgccaggtg gccgagtcgg gtgaggccac
     2041 cggcgtcgtc atcacccacg gcaccgacat cctggaggag accgcgtatc tgctcgatcg
     2101 cacgctgcac ccccgcatcc cggtcgccat taccggcgcg atgcgcacgt ccagcgacga
     2161 cgggtgggac gggccgcgca atctccggga tgccgtgacc gtcgccgcga gccccgccag
     2221 cgcggggcgc gggaccatgg tggtgttcgc gggccaggtg ttccccggcc gcacggcggt
     2281 gaagagccac gcgaccggcg tcgaggcgtt cgccgcgccg catggcggtc cgatcgggcg
     2341 ggtagcggac ggcggggcca cgttcaccgc gccgccgccg agggacggcg ccccgatcct
     2401 gcccccgtcg ctgcacgccc gcgtcgccca cgttcccgcg gtggtgggcg accagggagc
     2461 gatgctcgac ctcgcccgcg gggagcacga cggcgtggtg gtggaggcct tcggcagcgg
     2521 caacatgccg cccggggcgg tccccgccgt gcgccgctgg atcgaggcgg gcaagtcggt
     2581 ggtgctggcc acgcgctgct ggtgggggca ggtgaccccg ctctacgcct tcgagggtgg
     2641 cggagcgcgc actaccgcga tgggtgccat ccccgcggga cctcgaacgc cgtcgcaggc
     2701 gcggatggag ctggtcatcg cgctgtcggc cggcgtgccg tacggctccc catgagcttt
     2761 ccgccgtccg tgccggtgcc cgaggaggtc ctggagatcg cccgcgtgct ggagcgctcc
     2821 ggccacgagg cctggtgcgt gggtggtgcc ctccgggata cgctgctggg cgacccccat
     2881 tccgacttcg acctcgccac caccgccccg ccggtggagg tgcagcgcct cttccggcgc
     2941 actgcgccga tcggcgtgga gcatggcacc gtcggagtga tcgaccggaa ccgggtgctg
     3001 cacgaggtca ccacctttcg acgggacgtc cgcaccgacg gccggcacgc ggtggtggag
     3061 tacggtgtct cgctggacga ggacctcgcc cgtcgcgact tcaccatcaa cgcgatcgcc
     3121 taccatccgc tccggcacga gtggcgcgat ccccacggcg gggagcgcga tctggaggcg
     3181 ggtgtagtgc gggccgtggg cgaccccgcc gcgcgcttcc gggaggacta cctcaggatc
     3241 ctgcgggcgc ttcgcttcgc ggcgaggttc gggttcagca tcgagcgagg gacctgggag
     3301 gccgcgaagg cagcatcgga cggcctcggg cggctgtccg cggagcgggt ccgggacgag
     3361 tggttcaagg gaatccggac ggcccgggac ctggggacgc tggtgcgact gtggcgcgag
     3421 gcgggcgcgg cggcggtgtg gttgccggag ctgcgctcag cggccgagga cctgccctcg
     3481 cctcagctgt cgccgccacc gcgggacccg gtgctcgtca ccgcgctgct cgcgagcgat
     3541 ccggccgggc tgctccgccg gctccgggcc tccaacgccg agatcgcgcg ggcggaggcg
     3601 ctggcctccg gtccacagca gcccgccggc ggcgacgagg tggcggtgcg gcgctggctc
     3661 gcggccgtcg gcgccgcggc ggacgacctg gtcgaggtct accggttgcg acagggcgcg
     3721 gcggcgccct ggctcgccat catgcgggcg attcgcgagc gaggcgaccc actgacccgc
     3781 ggaagcctgg cggtgggcgg tcacgagctc gaggcgatcg gcatccgtgg ccgggaggtc
     3841 ggcgagacgc tcgcgctcct gctcgaccgg gtgctggaag atccggcggc gaacacccgc
     3901 gagcgcctgc tccagctggc gcgggaacga cagtgacgcc actctggttc gcgctcgccg
     3961 cggcgctggg caacctggcg ggcgcgttcg ccgtggtccg aagtctccgg cgggagctcc
     4021 gcgtcatcga cgcctgtctc gccttcggcg ccgggttcat gctcgccgtc gcggtcctcg
     4081 gcgtgctgcc ggaggtgctg cgcgacggtg aaggcggcgc cctgtacgtg ctcgggggct
     4141 acctcgcggt tcatctggca cagcacgtct tcaccccgca cttccatttc ggtgaagaga
     4201 cccatcgggt gagcccgagc gccggcgtgt cggcgctgct gggtctcatg ctgcacacct
     4261 tcttcgacgg cgtggcgatc gccagcggat tcctggtgtc gggcgagctg ggtctgctcc
     4321 tcttcctcgc cgtcctgctg cacaagctgc cggagggggt caccatcgcg agcgtgatgg
     4381 tggccggtgg tcagagccgg aaccgggcgc tgggcgcggc cgcggtcctc gggctggcga
     4441 cggtcctggg ggtcgtgctc accgaggtgg tggcgccgct cgcccgccac ggcctggcga
     4501 tctccgccgg cgtcaccatc tatgtggcgg cctcgaacct ggtccccgag ttccaggcca
     4561 agcggggctg gctcagcgcc ctggcgttct tcgggggcgc cgtgggattc ttcctgacgg
     4621 agcggctgct cggcatgtgg atgcggtgag ccgcccggga ggagccatgg cgaggaagcg
     4681 gggtgcggag cagggcgagt cactcttcag cgcgacgcgg gaaggccaac cgctcgccgc
     4741 ccgcatgcgg ccgaggacgc tggacgagtt cgtcgggcag gagcacctgc tcgcgccggg
     4801 gaagccgctg cgggaggcca tcgagcgcgg ggtgccgggc tccatgatct actggggccc
     4861 gccgggcagc gggaagacca cgctcgctca cctggtcgcc agctcgaccg cgcgtgtgtt
     4921 cgtccccttc agcgcggtgt ccgagggcgt gccgcggatc cgggagatcg tggggcaggc
     4981 gcgggcccgg ctggagtccg ggggctccca gaccattctc ttcgtggacg agatccaccg
     5041 gctgaacaag gcgcagcagg acagcctgct gccgccgtcc gaggacggca ccatcacgct
     5101 gatcggggcg acgaccgaga atcccagctt cgagatcaac ggcgcgctgc tgtcgcggac
     5161 ccgggtgttc gtgctccagc cgctcaccgc cgggcacgtg gccgagctgc tccgccgggc
     5221 gctggaggac ggggagcgcg gtctcggggc gatggagttg gccgtcgagc cggtggcggt
     5281 cgagtccatc gcggtggagg cggacggcga cgcgcgccgg gcgctcaccg tgctcgaggc
     5341 ggccgcggcg catgtggggc cgggcgggac catcacgacc gaagtggccc gggaggcgat
     5401 gcagaagcgc ttcgcccgct acgacaaggc gggcgaggag cactacaacc tgctctctgc
     5461 ctatcacacg tcgctccgcg gcagcgatcc ccagggcgcc ctgtactgga tggcgcggat
     5521 gatcgacggg ggcgaggacc cgatgacgct gttccggcgc gccatcgcga tggcggccga
     5581 ggacatcggg ctggcggacc cgaacgccct ggtgatggcg gtggcggcgc gcgacgcctt
     5641 tcacatgctg gggccgccgg agggctatct gccgctggcg gagatgacga tctacctcgc
     5701 caccgccccc aagtcgaaca gcgccaaggt ggcgctgggt gaagcgatgg ccgcggcgca
     5761 ggagacgccg gcggcgccgg tgccgatgca catccgcaac gcgccgacgg ggctgatgaa
     5821 ggagctcggc tacggcaagg gctaccaata cgcccacgac tcgccggacg cgtacctgcc
     5881 gcaggagtac ctgccggacg agctgcgggg aaaggcgttc tacacgcccg ggggattcgg
     5941 gtacgagaag cgggtggcgg agcgcatggc ctggtgggag cggaggaagg cggaagggga
     6001 gggggaaggc gagccgggat gaccgccggt gtgagcctcc gcaccgccac ccgcccccat
     6061 cgcggggcat catcgtctcg ggcggctccg gcgcctcgcc ggcacactat ctttccggga
     6121 gcccaaggag ggcgcggatg agactcgggg ctggtgcggg agcggtgctg ctggcggccg
     6181 tgctggccgg ctgcgccgga ttgggaaacg cactgcgaga tcccgagatc gagctggagc
     6241 gggtgcgggt gcgcgacgtc ggcgtccggg gcggggagct ggagctccag ctgggcttcg
     6301 agaaccccaa ccccttcgat ctccgcggca ccgagatcgt gctcggcttc gacgtcgagg
     6361 ggtcccacgt cggcgatgtg cgctacgccg acgacttcag cctcgagcgg ggcggccgaa
     6421 cgagtctcgc gctgcctctc aggttcgagt gggcgggcgt cggaagcgcg ctgcgcaccg
     6481 cgctgagctc gggcgagatc ccgtaccaga tgaaggggca actcacgatc cagacaccgt
     6541 ggggcgcgca gagcgtcccg ttcaccaggg atggccgcgt gccgctcagc cgagcggcca
     6601 cgttgccggc cgccaccagc cgctgacggc ggggaccaga gaccatcagt agaacaccca
     6661 tcgaagtccg cgacccgatc gagcgtgccg ttctggtcgc cgccccacgg aaggggtcgg
     6721 gcgacgcgcg gcacgtgacc gatcacctcg aagagctcac cagcctcgtc gataccgccg
     6781 gcgccgaagt cgtgggccgg atctcgcagc agatcaccgc ccccaacccc gcgaccctga
     6841 tcggcgaagg caaggtggag gaagtggcgc gcgcggtgac ggagtcgggc gcctcgctgg
     6901 tcatcttcga cgaggagctg agcccggtgc agggcgccaa cctggagcgc gcgcttcagg
     6961 tccgggtgat ggatcggccc gaggtcatcc tcgacatctt ctccacccgc gcccggagcc
     7021 acgaggccaa gctccaggtg gagctggcgc agctggagta cctcctgccc cggctcaccc
     7081 ggatgtggac ccacctctcc cgtatccgcg gcggcatcgg ccttcggggc ccgggcgaaa
     7141 cccagctcga gacggaccgc cggatcattc ggcgccggat ccaggggctc aaggccaagc
     7201 tccagagcgt ggagcgccac cgggagaacc tccgcgccgg ccgcgacccc atgctgggcg
     7261 tggcgctggt gggctacacc aacgcgggca agtcgagcat cctccgcgcg ctctccgggc
     7321 agcacgagat cttcgtcgag gaccggctgt tcgcgacgct cgacacgctc acccgcgagg
     7381 tggacctggg cgagggccag cgtgcccggg tcaccgacac cgtcggcttc atccgcaagc
     7441 tcccccacca cctggtggcg agcttccggg ccaccctgga ggaagcgcgc ggcgccgacc
     7501 tcctgctcca cgtcgtggat gcgagccatc acgattggga gggccagatg cgggtggtcg
     7561 agcgggtcct cgccgacctg gagctgaacg accgtccctt gctcccggtc ttcaacaaga
     7621 tggacctggt cgccgatccg gccggcttcg ccaaccgggt gcgggagctc taccccgggg
     7681 ccctcacggt cagcaccatg cgcaccagcg gcctcgcgcc gctgaaggcg gtgctgcggg
     7741 agagggagcg cgccggccgc caggtcgtcc gcgtgcgcct cgcggtctcc gacggggccc
     7801 gcctcgccgc gctctaccgg gagggcgagg tgctctcccg ccaag
//
LOCUS       DASUYN010000049         2244 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_13960, whole genome shotgun sequence.
ACCESSION   DASUYN010000049 DASUYN010000000
VERSION     DASUYN010000049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2244)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2244)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2244
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13960"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..624
                     /locus_tag="VF061_00970"
     CDS             <1..624
                     /locus_tag="VF061_00970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668095.1"
                     /translation="TTRADGDRAVADVTNVSARAIALGVELRLRGAQRVDTVRARGSA
                     IREVPFTIPAWATGLEVDVRMNPEQWGRFTDFGVTVLDSLGGQLAQEPLQYAFGRLST
                     LLPAGHGGTRATLSLYPGLADGGDERDWGVVTSIRLYADSAVAVAPEEGAGELRLQPR
                     GRGAARFRLPASPWPLPAGFSPLGVVLVRDGEQVWTREGGFGGGNDG"
     gene            617..1993
                     /locus_tag="VF061_00975"
     CDS             617..1993
                     /locus_tag="VF061_00975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyclic terpene utilization AtuA family protein"
                     /protein_id="HEX6668096.1"
                     /translation="MGERVVRIAAGQGFWGDWLEAPVRQVRGGPIDYLMMDYLAEVTM
                     SIMQKQKSRDPRAGYARDFVPLMERILPDVVKRGIGVTSNAGGVNPRGCAEAVLEVAR
                     RLGLAGKVRVGLVTGDDILDRLDDLIGRGHPLADMETGRPLVEIRDRVLSANAYLGMA
                     PIVEALRGNANVVVTGRVTDTGLTLGPIFHEFGWSPEDWDKVAAGTVAGHIIECGAQA
                     SGGNLLKGWRSVKGLADPGFPIVEASPDGSFVVTKHPGTGGVVSVASVTEQLVYEMGD
                     PRSYITPDGVADFTTIHLRQAGRDRVRVSGIRGGPRTPMLKVSIAYFYGYKAVGTLVY
                     AWPEAYDKARAADRILRQRLADLGLEFEQILTEFVGVDATHGRLSGEPDPEAPEVQLR
                     VGVRARDKAPVERFTRELAPLVLTGPPSVTGFAGGRPAVEEVVAYWPALIARREIERG
                     VRVEILEA"
     gene            2007..>2244
                     /locus_tag="VF061_00980"
     CDS             2007..>2244
                     /locus_tag="VF061_00980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668097.1"
                     /translation="MATSRSRKTTRRATPKGRMVQLRWLAHARSGDKGNTANVGLIAL
                     EAELYPILVREVTAARVARHFRGMVSGVERFELPN"
BASE COUNT          317 a          741 c          868 g          318 t
ORIGIN      
        1 accacgcgcg cggacggaga tcgggccgtt gccgacgtga ccaacgtgag cgcgcgagcg
       61 atcgcactcg gggtcgagct gcgcctgcgt ggggcgcagc gcgtggacac ggtgcgcgcc
      121 cggggctcgg cgatccggga ggtgcccttc accattcccg cgtgggcgac cggactggag
      181 gttgacgtcc ggatgaatcc cgagcagtgg gggcggttca ccgacttcgg agtgacggtg
      241 ctcgattccc tgggcggcca gctggcccag gagccgttgc agtacgcctt cgggcgtctc
      301 agcaccctgc tgccggcagg gcatggcggc acccgtgcca ccctgtcgct ctaccccggc
      361 ctcgcggacg ggggcgacga gcgcgactgg ggcgtcgtca ccagcatccg gctctacgcc
      421 gactccgccg tcgccgtcgc ccccgaggaa ggcgccggcg agcttcggct gcagccccgc
      481 gggcgaggcg cggcccgctt tcggctgccg gcctcgccct ggccgctccc ggcgggattc
      541 tcgcccctcg gtgtggtcct ggtgcgcgat ggcgagcagg tgtggaccag ggaaggcggc
      601 tttggaggag ggaacgatgg gtgagcgcgt ggtgcggatc gcggccgggc agggattctg
      661 gggcgactgg ctggaggcgc cggtacggca ggttcgcggc gggccgatcg actacctcat
      721 gatggactat ctcgccgaag tcaccatgag catcatgcag aagcagaagt ctcgcgaccc
      781 acgcgcgggc tacgcccggg acttcgtgcc gctgatggag cggatccttc cggatgtggt
      841 gaaacgaggc atcggggtga cgtcgaacgc cggcggggtc aacccccggg gctgcgcgga
      901 ggcggtgctg gaggtggcgc gcaggctggg gctcgcgggc aaggtgcgcg tcggtctcgt
      961 caccggcgac gacatcctgg accggctgga cgatctcatc ggccgcggcc acccgctggc
     1021 ggacatggag accgggcggc cgctggtcga gatccgcgac cgggtgctgt ccgccaacgc
     1081 gtacctcggc atggcgccga tcgtcgaggc cctgcggggg aacgcgaacg tggtggtgac
     1141 cgggcgggtg accgacaccg ggctcacgct gggacccatc ttccacgaat tcggctggtc
     1201 gccggaggac tgggacaagg tggccgcggg cacggtggcg gggcacatca tcgagtgcgg
     1261 cgcccaggca tcgggcggca acctcctgaa gggctggcgg tcggtgaagg ggctggccga
     1321 ccccggcttc ccgatcgtcg aggcatcgcc cgacggcagc ttcgtggtga ccaagcaccc
     1381 cggcaccggc ggcgtggtgt cggtggcctc ggtgaccgag cagctggtgt acgagatggg
     1441 cgatccccgg tcctacatca ccccggacgg tgtggccgat ttcaccacca tccacctgcg
     1501 ccaggcgggc cgcgaccggg tacgggtctc gggcatccgc ggcggaccgc gcaccccgat
     1561 gctcaaggtc tccatcgcct acttctatgg ctacaaggcg gtgggcacac tggtctatgc
     1621 ctggcccgag gcctacgaca aggcgcgggc cgccgaccgg atcctgcggc agcggctggc
     1681 ggacctcggg ctggaattcg agcagatcct gaccgagttt gtaggcgtcg acgccaccca
     1741 tggacgcctg agcggcgagc ccgaccccga ggcgcccgag gtgcagctcc gggtgggggt
     1801 acgggcccgg gacaaggcgc cggtggagcg gttcacccgc gagctggcac cgctggtcct
     1861 gaccggcccg ccgagcgtga cggggttcgc gggtggccgg ccggcggtcg aggaggtggt
     1921 ggcgtactgg ccggcgctga tcgcccggcg ggagatcgag cgaggcgtgc gggtggagat
     1981 cctggaggcc tgaccggagc attcccatgg ccacatcgcg ttcccggaag accaccagac
     2041 gcgccacacc caagggccgc atggtccagc tccgctggct ggcgcacgcg cgctcagggg
     2101 acaagggcaa caccgccaac gtcggcctga tcgcgctcga ggccgagctg tatccgatcc
     2161 tggtccggga ggtcacggcc gcgcgggtgg cccggcattt caggggcatg gtgagcgggg
     2221 tggagcgctt cgagctgccc aacc
//
LOCUS       DASUYN010000050         3489 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1336799, whole genome shotgun sequence.
ACCESSION   DASUYN010000050 DASUYN010000000
VERSION     DASUYN010000050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3489)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3489)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3489
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1336799"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..486)
                     /locus_tag="VF061_00985"
     CDS             complement(<1..486)
                     /locus_tag="VF061_00985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEX6668098.1"
                     /translation="MAGHSKWKQIKRKKAVTDARRASSWTKVIREITVAAKSGGGDPA
                     GNPRLRTAIDAAKAVNMPNDNIERAIKKGTGELEGSTYEELTYEGYGPGGAAIFIEAT
                     TDNANRTVAEIRHAFSRNGGNLGASNSVAWMFDRKGQIYLDATRHGEDATLEAALEAG
                     AD"
     gene            632..1009
                     /locus_tag="VF061_00990"
     CDS             632..1009
                     /locus_tag="VF061_00990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668099.1"
                     /translation="MLLALVACKDETLEMAKLSDVFPNLPVPPEASVVSREGSPDALM
                     LTFMSNAKPAEVEAYYREVLTRNGWRLVGDTRDAEGAVVFLAEQDGPPLWVRIQSTSD
                     SVATMVELAGAVASRKKELKPAS"
     gene            complement(1089..1487)
                     /locus_tag="VF061_00995"
     CDS             complement(1089..1487)
                     /locus_tag="VF061_00995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668100.1"
                     /translation="MSGWDPAASALLQLLPQTGRGPRREGIFALWLTVRVAQDLVREP
                     PAERAHRRRLQALEHRLSSLTLPPPLRRALGTAISQLRDARSETAVQVLSQLVAPARE
                     SGGTEAGDAVAQAARAARSHFRSCSAGGVR"
     gene            complement(1484..2503)
                     /gene="waaF"
                     /locus_tag="VF061_01000"
     CDS             complement(1484..2503)
                     /gene="waaF"
                     /locus_tag="VF061_01000"
                     /inference="COORDINATES: protein motif:HMM:TIGR02195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008920 - lipopolysaccharide
                     heptosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HEX6668101.1"
                     /translation="MSETNSPDVLVVRFSAIGDILLLTPLLRAIRARHPGARVAVLTK
                     ERYAPLLSHNPHVSEVLGVTPDEGIMAIAERVRSVRYTHLLDLHGNLRSHALRRLAPG
                     PWRSYAQRGLERAVLITTKRDRYRDHVPVAERYFEAAKELEIEPDGGPPDFFIAEEAD
                     CRAAERLVALGLGRDRPVVAIAPGAAHATKRWPVEYWVELIGRITPTGADVAVLGGPD
                     DAEAGDEIARRAGDHAGSLAGALGLQETGALIRRAEVLISGDTGVMHMATGVGTPVVA
                     LFGPTVRQFGFFPYRSPAQVVELDLPCRPCSAHGNRRCPLGHHHCMRRMLPDLVYAAL
                     ARALA"
     gene            complement(2552..2923)
                     /locus_tag="VF061_01005"
     CDS             complement(2552..2923)
                     /locus_tag="VF061_01005"
                     /inference="COORDINATES: protein motif:HMM:TIGR02436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HEX6668102.1"
                     /translation="MAPYERFVAWQMAHRMALSIYSATDSWPPGERFGLTIQVRRAAL
                     SVPTNIAEGAAKRGPREFRRFLDIALGSLAELTYLLRFSRDRELLTPQSWLELEDLRD
                     QSGKLTWQLYRSLSPGAPPTT"
     gene            complement(3047..>3489)
                     /locus_tag="VF061_01010"
     CDS             complement(3047..>3489)
                     /locus_tag="VF061_01010"
                     /inference="COORDINATES: protein motif:HMM:NF012676.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668103.1"
                     /translation="KMAIDDALEAAELGVDVIWPEFNNVELDQPREFAEGVRKHYPNQ
                     MLGFNLSPSLYFGKAKKAGTLITNQQLADLGFTLQFSTLFNFRTAGMALEKGLRKFLA
                     SGLDALADLQIEEDAQEQAPLTKMHQKFAGMNRWLVLEQVLSGK"
BASE COUNT          516 a         1192 c         1226 g          555 t
ORIGIN      
        1 gtcggcgccg gcctcgagcg cggcctcgag ggtggcatcc tcgccgtggc gggtggcgtc
       61 cagatagatc tggcccttgc gatcgaacat ccaggccacc gaattggacg cgccgaggtt
      121 gccgccgttg cggctgaagg cgtgacggat ctcggcgacg gtgcggttgg cgttgtcggt
      181 ggtggcctcg atgaagatcg ccgccccgcc ggggccgtag ccctcgtagg tcagctcctc
      241 gtaggtgctg ccctcgagct cgccggtgcc cttcttgatg gcgcgctcga tgttgtcgtt
      301 gggcatgttg acggccttcg ccgcgtcgat cgccgtccgc aggcggggat tgcccgccgg
      361 gtcgcccccg ccgctcttgg cggcgacggt gatctcacgg atgaccttgg tccaggagga
      421 ggcgcggcgg gcgtcggtga cggccttctt gcgcttgatc tgcttccact tgctgtggcc
      481 ggccatggcc cgagctccta gtagcgacgc ggaaacataa gcgtgacagc cgtttgcggc
      541 aatcgctcgg ggctcgcggc cccttgaccg ggcccggccc ggcggctagt ctccccgctc
      601 tatgatcccc accagactcc gagtcggact cgtgctgctg gcgctcgtcg cgtgcaagga
      661 cgagacactc gagatggcca agctgtccga tgtctttccc aacctgcctg ttcctccgga
      721 ggccagcgtc gtctcccgcg aaggcagccc ggacgcgctc atgctcacct tcatgtcgaa
      781 cgccaagccg gccgaggtcg aggcgtacta tcgcgaggtc ctaacccgga acggctggcg
      841 gctggtggga gacacacggg acgccgaagg cgccgtggtg ttcctggcgg agcaggacgg
      901 tcccccgctc tgggtccgga tccagagcac cagcgatagc gtggcgacga tggtggagct
      961 ggccggcgcg gtggcgtctc gaaagaagga gttgaagccg gcttcgtgag cgcgggccag
     1021 ctgcacggct gcagcaggtc ctcgaagcgc agccaccggg atcgaggtat ccactcccaa
     1081 gcctcgcact atcgcacccc tccggcactg caggaccgga agtgcgatcg cgcggctcgc
     1141 gccgcctgcg ccaccgcgtc accggcttcg gtcccaccgc tctcgcgcgc gggcgcgacc
     1201 agctgactca gcacctgcac cgccgtctcc gatctcgcgt cgcgcagctg gctgatcgcg
     1261 gtccccagcg cgcgacggag gggaggcggc agcgtgagac tggagagccg gtgctccagg
     1321 gcctgcagtc ggcggcggtg cgcccgctcg gccggcggct cacgcaccag atcctgggcc
     1381 acccggaccg tcagccagag cgcgaagatg ccctcgcggc gcgggccgcg gccggtctgc
     1441 ggcagcagct ggagcaaggc gctggccgcg gggtcccagc cgctcatgcg agggcccggg
     1501 ccagcgcggc gtacaccaga tccgggagca tccgtcgcat gcagtggtgg tggccgaggg
     1561 gacagcgccg gttgccgtgg gcgctgcagg ggcggcaagg gaggtccagc tcgacaacct
     1621 gggcgggcga ccggtagggg aagaacccga actgccgcac cgtcggcccg aacagcgcga
     1681 cgaccggcgt gccgacaccg gtggccatgt gcatcacgcc ggtgtcgccc gagatcagca
     1741 cctccgcgcg gcggatgagg gctccggtct cctggagacc gagcgcaccg gcgaggctgc
     1801 cggcatgatc gcccgctcgg cgcgcgatct cgtctccagc ctcggcatcg tcgggtccac
     1861 cgaggacggc gacgtcggcg ccggtcgggg tgatgcggcc gatcagctcc acccagtatt
     1921 cgaccggcca gcgcttggtg gcgtgggccg cccccggggc gatggcgacg accggccggt
     1981 cgcggcccag cccgagcgcg accagccgct cggcggcacg gcagtccgcc tcctcggcga
     2041 tgaagaagtc gggcggccca ccgtcgggct cgatctccag ctccttcgcc gcctcgaagt
     2101 agcgctcggc caccgggaca tggtcgcggt agcggtcccg cttggtggtg atcagcaccg
     2161 cgcgctccag cccgcgctgg gcgtaggatc gccagggccc cggggcgagt cttcggagcg
     2221 cgtggctccg gaggttgccg tgcagatcga ggagatgggt gtaccgcacg ctgcggaccc
     2281 gctcggcgat ggccatgatc ccttcgtccg gcgtcacccc cagcacctca ctcacgtgag
     2341 ggttgtgact gagcaggggc gcataccgct ccttggtcag cacggcgact cgcgccccgg
     2401 gatgacgggc gcggatggcg cgaaggagcg gcgtgaggag aagaatgtcc ccgatggcgc
     2461 tgaagcgtac gacgaggacg tcggggctgt tggtctcgga cacggggaga atgtaggcgg
     2521 taaggcggta aggcggtaag gcggtaggtg gtcaggtggt gggcggcgct cctggggaaa
     2581 gcgagcggta cagttgccac gtgagcttgc ctgactggtc cctgaggtct tcgagctcga
     2641 gccaggactg aggcgtaagc aactcccgat cccgactgaa tcggaggagg taggtcagct
     2701 ctgctagcga accgagcgcg atatcgagga accgtctgaa ttcccgaggg ccgcgcttcg
     2761 cggcaccctc cgcgatgttc gtgggcaccg acagtgcggc gcgccggacc tggatcgtga
     2821 gcccgaatcg ctcgcccgga ggccatgaat cggtggccga gtagatggac agggccatcc
     2881 ggtgagccat ctgccaggcc acgaaccgct catagggcgc catccccaat ccttcgtgcc
     2941 cgcttgcgcc ccgaactaac ccgcacgacg cgccccggac cgccttaccg ccttaccgcc
     3001 ttaccgcctt accgccttac cgccttaccg ccttaccgcc ttaccgtcac ttcccgctca
     3061 gcacctgctc cagcaccagc caccggttca tcccggcgaa cttctggtgc atcttggtga
     3121 gcggcgcctg ctcctgggcg tcttcctcga tctgaagatc ggccagcgca tccagtccgc
     3181 tcgccaggaa cttgcggagc cccttttcca gcgccatgcc ggccgtgcgg aagttgaaga
     3241 gggtcgagaa ctggagcgtg aagcccaggt cggcgagctg ctggttggtg atcagcgtgc
     3301 cggccttctt cgccttcccg aagtagagcg acggcgacag gttgaagccc agcatctggt
     3361 tggggtaatg cttgcggacg ccctcggcga actcccgcgg ctggtccagc tccacgttgt
     3421 tgaactcggg ccagatcacg tcgaccccga gctccgccgc ctccagggcg tcgtcgatcg
     3481 ccatcttca
//
LOCUS       DASUYN010000051         6083 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_236428, whole genome shotgun sequence.
ACCESSION   DASUYN010000051 DASUYN010000000
VERSION     DASUYN010000051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6083)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6083)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6083
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_236428"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1554
                     /gene="murJ"
                     /locus_tag="VF061_01015"
     CDS             <1..1554
                     /gene="murJ"
                     /locus_tag="VF061_01015"
                     /inference="COORDINATES: protein motif:HMM:TIGR01695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0034204 - lipid translocation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HEX6668104.1"
                     /translation="GGRAPRPALMVAAGILLSRLIGLVRNRLFAHYFGTSDAADAFNA
                     AFRIPNFLQNLFGEGVLSASLIPVYAQLRAGGRTREAAAVATAVAALLGFTVSVLVLA
                     GVLLAPWLIDLIAPGFEGEKRELTVRLVQILFPGAGLLALSAWCLGVLNSHRRFFLPY
                     VAPVLWNLAIIVALVVFGGRLGQSDLAVIAAWGSVAGSLLQLLIQVPTVLRLLDGLRP
                     GPLLGAGSRSVLRNFGPVFVGRGVVQISAYVDTLLASLLPTGAVAAVSYAQVLYTLPV
                     SLFGMSVSAAELPEMSSVTGTGEERSAHLRGRLQAGLRQIAFLVVPSVVGFVALGDVV
                     TGALYQSGEFTAEMTRYVWAILAAASVGLLPSTLGRLYSSAFYAMHDTRTPLRIALVR
                     VSLGVALGYVLALHLPAALGLGAAWGAAGITLASALAAAVEYVLLRRALGRRIGRTAL
                     AKGLVLRLWLAAFVAAAAGWAVRAALPPIHPIPEAVAVLGAFGLAYFGAGAAMGLPEA
                     RRVLWPARR"
     gene            1586..3406
                     /gene="uvrC"
                     /locus_tag="VF061_01020"
     CDS             1586..3406
                     /gene="uvrC"
                     /locus_tag="VF061_01020"
                     /inference="COORDINATES: protein motif:HMM:NF001824.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HEX6668105.1"
                     /translation="MSAPSLPDQLQRKLDTLPEGPGVYLWRDAAGDVLYVGKAKRLRS
                     RVRSYFATDFPTSARNQLLQRLIADVETIVVPSEAQSLILENNLIKEYRPRFNVRLKD
                     DKSYPSIAVTLNEAFPRVLVTRRRNIPGARYFGPYTDVGQLRRTLAIIRRLYTVRSCH
                     DALPEERRERPCLDYHIGRCRGPCMGWQAEADYRRMVEDVVQFLEGRTGDLRARVREA
                     MLAASDAESYERARDLRDALRWLEKLEEPVAVEVIGTGDADAIGFARDGDDAVGVLMR
                     VREGRVVGREHRFLEGVEEEQDPAILSAFLVRYYVPAEDRARRIVLPFPPDDWDALRE
                     LLPGSEWLVPQRGTAYRWLELADHNARHLLESLRIESFETEERAEDPVYALGRDLGLS
                     SVPRSMVCIDISHNQGKDTVGSLVWFEAGRPRKSEYRKFRIQGLGQQDDFAAIQEVLT
                     RYLTRRRDERLPVPELFLIDGGKGQLNAAVDAAERLGFGGLQFASLAKREEEVFLPGR
                     SEPLRLSRRSPSLRLLQRIRDEAHRFGLAYNRKRRTQRTITSELLNIPGVGPRRRRLL
                     LERFGSLAGVKSASVSELATVPGFSTRLAERVLEHLQTRA"
     gene            3409..4305
                     /locus_tag="VF061_01025"
     CDS             3409..4305
                     /locus_tag="VF061_01025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-formamidopyrimidine glycosylase family
                     protein"
                     /protein_id="HEX6668106.1"
                     /translation="MPELPDVIVYLEALERRILGRRLAGMRLLSPFVLRTVEPPVATL
                     FGRRVLHLRRMGKRIVLGFDGDLFLVIHLMIAGRLRWGPPGAKAPGRIGLAAFDFDDG
                     TLLLTEAGSKRRASLHVVGGGTLAEFERGGLEPLEASADAFAARLRLESHTLKRALTD
                     PRLFSGIGNAYSDEILHRARLSPLKLTGRLDDREVARLYHATRAVLGEWTERLRRQTG
                     DGFPEKVTAFRDGMAVHGRFRQPCPECGTPVQRIRYAENETNYCPLCQTEGRLLADRG
                     LSRLLKADWPRSLEELDERLKS"
     gene            4377..5666
                     /gene="larC"
                     /locus_tag="VF061_01030"
     CDS             4377..5666
                     /gene="larC"
                     /locus_tag="VF061_01030"
                     /EC_number="4.99.1.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel pincer cofactor biosynthesis protein
                     LarC"
                     /protein_id="HEX6668107.1"
                     /translation="MSDGRFAILDPAAGISGDMLLGALVAAGAPTDWLLGVPGRLGLP
                     DVRIAIEQVDRCGLRATKVNVLLADGSHEAPSQLIHEPHAHPHSHDHHHAPHRHVGEL
                     IEILGRAPLSDWVRSRAVRAFRLLGEAEGRIHGVPAEEVALHEVGAMDALVDVVAGIE
                     GFERLGIERIHHRPVALGSGWVRAAHGAIPVPAPATAVLLEGLEVVTGGPVVGEATTP
                     TGAALLRVLTSGPPPAHWRVIGAGAWGAGGRDPEGYPNALRLILAEPAREAGDVVILS
                     TDIDDLSPEYLEPLRAALVEAGALDVQMWATQMKKGRIGFRVETVVPPAEADRVAEAL
                     VRHSTTAGVRRQTVERHTLARREVELEADAGINVRVKVLDAPDGPRVKPEFDDVEAVA
                     RRTGRPAHEVARDLHQRALRLVSSDGATQVVTPNKES"
     gene            5694..>6083
                     /locus_tag="VF061_01035"
     CDS             5694..>6083
                     /locus_tag="VF061_01035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668108.1"
                     /translation="MLLLPLAATAAEAQQRVMSDRVAKAMPAAYRAPDCGLKSGHFKV
                     SSGATYLKTSIETDVPENKERALENAEKVLLESMRQNNQASNPAAWYYLGRVYLQRGD
                     LVGADTALTRAEKMAPDCAKEIDGYRQN"
BASE COUNT          819 a         2118 c         2208 g          938 t
ORIGIN      
        1 ggaggccgcg cgccccggcc cgccctgatg gtcgcggcgg ggatcctgct cagccgcctc
       61 atcggcctcg tccgcaatcg gctcttcgcg cactacttcg gcacatccga cgccgccgac
      121 gcattcaacg cggcgttccg cattcccaac ttcctccaga acctgttcgg cgagggtgtg
      181 ctctcggcct cgctgatccc ggtgtacgcc cagctccgtg ccggtggacg cacccgcgag
      241 gccgccgcgg tggcgaccgc cgtggcggcg ctgcttggct tcacggtctc ggtgctggtg
      301 ctggcaggtg tgctgctggc gccctggctg atcgacctga tcgcgccggg tttcgaaggc
      361 gagaagcgtg agctgaccgt ccggttggtg cagatcctct tccccggcgc cggccttctg
      421 gcgctgtccg cgtggtgcct gggggtgctc aacagccacc ggcgcttctt cctgccctat
      481 gtggcgccgg tgctgtggaa cctcgcgatc attgtcgcgc tggtggtttt cggcggccgc
      541 ctggggcagt ccgacctcgc ggtgatcgcc gcctggggct cggtcgcggg gagcctgctg
      601 cagctcctca tccaggtgcc gaccgtgctc cgattgctcg atgggctccg tcccgggccc
      661 ctcctcggcg ccggctcgcg atcggtgttg cgcaacttcg gcccggtgtt cgtgggccgc
      721 ggggtggtgc agatcagcgc ctacgtggac acgctgctcg cgagcctgct gccgaccggc
      781 gcggtggcgg cggtgtccta cgcccaggtg ctctataccc tgccggtgag cctgttcggc
      841 atgtcggtct cggcggcgga gctgccggag atgtcgagcg tgacgggcac gggcgaagag
      901 cggtccgcgc acctgcgagg ccggctccag gcgggcttgc ggcagatcgc gttcctggtc
      961 gtgccgtcgg tggtgggatt cgtggcgctg ggggatgtcg tgaccggcgc actgtaccag
     1021 tcgggcgagt tcaccgcgga gatgacccgc tatgtctggg cgatcctcgc ggccgcctcg
     1081 gtcggcctgc tgccctccac tctgggccgg ctctactcct ccgccttcta tgccatgcac
     1141 gacacccgca cgccgctccg gatcgcgctg gtgcgggtgt cgctcggcgt cgccctcggg
     1201 tacgtcctcg cgctccacct gccggccgcc ctcggcctcg gcgccgcctg gggggcggcg
     1261 gggatcaccc tggcgtccgc gctcgcagcg gcagtggagt acgtcctgct gcgccgggcg
     1321 ctgggccggc gcatcggtcg caccgctctg gcgaagggac tggtgctgcg actctggctc
     1381 gcggccttcg tcgcggccgc ggcagggtgg gcggtgcggg ccgcgctccc gccgatccat
     1441 cccatccccg aagcggtggc ggtactgggt gcgttcgggc tcgcgtactt cggggccggg
     1501 gcggccatgg ggctgccgga ggccaggcgg gtgctgtggc ccgcgcgccg ctgaggcccc
     1561 ccgatcccgc taagtttccc tccgtatgtc cgctccgagc ctccccgacc agctccagcg
     1621 caagctcgac actctgcccg agggacccgg cgtctacctc tggagggatg ccgcaggtga
     1681 cgtgctgtac gtcgggaagg cgaagcggct tcgcagccgg gtgcgcagct acttcgccac
     1741 cgattttccc accagcgcca ggaaccagct gctgcagcgc ctgatcgcgg acgtggagac
     1801 gatcgtggta ccgagcgagg cgcagtcgct catcctggag aacaacctca tcaaggagta
     1861 tcggccgcgg ttcaacgtgc ggctcaagga cgacaagagc tatccctcca tcgcggtgac
     1921 cctgaacgag gccttccccc gcgtgctggt cacccgccgg cggaacattc ccggcgcccg
     1981 ctacttcggg ccctacaccg acgtggggca gttgcgccgc acgctcgcca tcattcgccg
     2041 gctgtacacc gtccgaagct gccacgacgc gctacccgag gagcggcgcg agcgtccctg
     2101 cctcgactac cacatcgggc gctgccgggg cccgtgtatg gggtggcagg cggaggccga
     2161 ctaccggagg atggtggagg acgtggtcca gttcctcgag ggcaggacgg gggacctgcg
     2221 ggcacgggtc cgcgaggcga tgctcgccgc gagcgacgcc gagagctacg agcgggccag
     2281 agacctgcgc gacgcgctcc gctggctgga gaagctggag gagccggtcg cggtcgaggt
     2341 catcggcacc ggggacgccg acgccatcgg cttcgcccgc gacggcgacg acgcggtggg
     2401 ggtgctgatg cgggtgcgcg aggggcgagt cgtgggccgg gagcaccgct tcctcgaggg
     2461 ggtggaggag gagcaggacc ccgccatcct cagcgccttc ctggtgcgct actacgtgcc
     2521 cgccgaggat cgcgcccgcc gcatcgtcct gccgttcccg cccgacgact gggacgcgct
     2581 ccgcgagctg ctgcccgggt cggagtggct ggtcccgcag cgaggcacgg cataccggtg
     2641 gctggagctc gccgaccaca acgcgcgcca tctgctggag agcctccgga tcgaatcgtt
     2701 cgagaccgag gagcgggccg aggacccggt gtatgcgctc gggcgcgacc tcggcctcag
     2761 ctcggtgccg cggagcatgg tgtgcatcga catctcccac aaccagggca aggacaccgt
     2821 gggatccctg gtgtggttcg aggccggccg cccccgcaag agcgagtacc gcaagttcag
     2881 gattcagggt ctgggacagc aggatgattt cgccgccatc caggaggtgc tcacccggta
     2941 cctcacccgg cggcgcgacg agcggctccc ggtgcccgag ctgttcctga tcgatggcgg
     3001 caagggccag ctcaacgcag cggtcgacgc cgcggagcgg ctgggcttcg gcgggctgca
     3061 gttcgcgagc ctcgcgaagc gggaagagga ggtcttcctg cccgggcggt ccgagccgct
     3121 gcgcctcagc cggcgaagcc cgtcgctcag actcctccag cggatccggg acgaggccca
     3181 ccgcttcgga ctggcctaca accgcaagcg tcgcacccag cgcacgatca cgtcggagct
     3241 gctcaatatc cccggggtgg ggccgcggcg gcgccggctg ctgctggagc gcttcggcag
     3301 cctcgcggga gtgaagtcgg cctcggtctc cgagctggcc accgtgcccg gattctctac
     3361 ccgcctcgcc gagcgcgtcc tcgagcacct ccagacgcgg gcctgagctt gcccgagctt
     3421 cccgacgtca tcgtctacct cgaggcgctg gagcggcgca tcctcggccg ccgtctcgcc
     3481 gggatgcgcc tcctcagtcc gttcgtgctt cggacggtgg agcccccggt cgcgacgctc
     3541 ttcggccgcc gggtgcttca ccttcgccgg atgggcaagc ggatcgtgct cggcttcgac
     3601 ggcgacctgt ttctcgtgat ccatctcatg atcgccgggc ggctgcggtg gggaccgccg
     3661 ggcgccaaag cgccgggcag gatcgggctt gcggcgttcg acttcgacga cggcactctg
     3721 ctgctgacgg aggcgggaag caagcgacgc gcgtcgctcc acgtggtcgg cgggggcacg
     3781 ctggccgagt tcgagcgcgg cgggctggag ccgctggagg cgagcgccga cgcattcgcc
     3841 gctcggctgc ggctcgagag tcacacgctc aagcgggccc tcaccgatcc gcgactcttc
     3901 agcggcatcg gcaacgcgta ctccgacgag atcctgcacc gggcccggct ctcgccgctc
     3961 aagctgaccg gccggctcga cgaccgggag gtcgcccggc tgtaccacgc tactcgggcg
     4021 gtcctcggtg agtggaccga gcgcctgcgg cgccagaccg gggacggctt tcccgaaaag
     4081 gtcaccgcct tccgcgacgg gatggcggtg cacggccgtt tccgtcagcc ctgtcccgag
     4141 tgcgggaccc ccgtgcagcg gatccggtat gccgagaacg agaccaacta ctgccctctc
     4201 tgccagaccg agggacgcct gctcgccgac cgcgggctgt cccgtctgct gaaggcggac
     4261 tggccccgca gcctcgagga gctggacgag cggctcaagt cctgacccgg cgcgcggttc
     4321 gggcgacggc cccgggaatt gccgcggggc gcctccccgg ccatatttat aagtctatgt
     4381 cagatggacg ctttgccatt ctggacccgg ccgcgggaat cagcggcgac atgctgctcg
     4441 gagcgctggt cgcggcgggc gcgccgacgg actggctgct cggcgtaccc gggcgactcg
     4501 ggctgcccga tgtccgcatc gcgatcgagc aggtggatcg ctgcgggctt cgggccacga
     4561 aagtcaacgt cctcctcgcc gacggcagtc acgaagcacc cagccagctg atccacgagc
     4621 cgcacgccca tccgcattcc cacgatcacc accacgcccc tcatcgtcac gtcggcgaac
     4681 tgatcgagat tctgggacgt gcccccctct cggactgggt gcgctcccgg gcggtgcggg
     4741 ccttccgcct gctgggcgag gccgagggcc gaatccacgg tgtgccggcg gaggaggtgg
     4801 cgctccacga ggtcggggcg atggacgcgc tggtagacgt cgtcgccggc atcgagggct
     4861 tcgagcggct cggcatcgag cgcatccatc accggccggt ggcccttggg agcggctggg
     4921 tgcgggccgc ccacggggcc atcccggtgc ccgcgccggc gacggccgtg ctgctcgaag
     4981 gcctcgaagt ggtcaccggc gggccggtgg tcggcgaggc cacgacgccg acgggcgcgg
     5041 cactgcttcg cgtgctcacc tccgggcccc cgccggcgca ctggcgggtc atcggcgcgg
     5101 gcgcgtgggg cgccggaggc cgcgaccccg agggctaccc caacgcgctc cggctcatcc
     5161 tggcggagcc ggcgcgcgaa gccggcgatg ttgtgatcct gtccaccgac atcgacgacc
     5221 tgagccctga atatctggag ccgctccgcg ccgcgctggt ggaggccggt gcgctggacg
     5281 tgcagatgtg ggccacgcag atgaagaagg gccggatcgg tttccgggtg gagaccgtgg
     5341 tgccccctgc ggaggccgat cgggtcgccg aggccctggt ccggcacagc acgaccgcgg
     5401 gcgtccggcg tcagacggtg gagcgtcaca cgctggcccg gcgggaggtc gaattggagg
     5461 cggacgcggg gatcaacgtg cgggtcaagg tcttggacgc tcccgacggg ccccgggtaa
     5521 agcccgaatt cgatgatgtg gaggcggttg cgcggcgcac cggccggccc gcccatgagg
     5581 tggcaaggga cttgcaccag cgcgcgcttc gcctggtgag ttccgatgga gccacacagg
     5641 ttgtgacccc gaacaaggag tcgtgacgag tgagagccat gatcgcgtcg gccgtgctgc
     5701 tgctgccgct cgccgccacc gccgccgagg cccagcagcg ggtgatgagt gaccgggtgg
     5761 cgaaggccat gcccgcggcg taccgcgcgc ccgactgcgg cttgaagtcg ggccacttca
     5821 aagtgagcag tggcgcgacc tacctgaaga ccagcatcga gaccgacgtt cccgagaaca
     5881 aggagcgggc gctcgagaac gccgagaagg tgctgctgga atccatgcgg cagaacaacc
     5941 aggcgagcaa tccggccgcg tggtactacc tgggccgggt ctatctgcag cgcggtgacc
     6001 tcgtcggcgc ggatacggcg ctgacccggg ccgagaagat ggcaccggac tgcgccaagg
     6061 agatcgacgg ctatcgccag aac
//
LOCUS       DASUYN010000052         3040 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_677238, whole genome shotgun sequence.
ACCESSION   DASUYN010000052 DASUYN010000000
VERSION     DASUYN010000052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3040
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_677238"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..401)
                     /locus_tag="VF061_01040"
     CDS             complement(<1..401)
                     /locus_tag="VF061_01040"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX6668109.1"
                     /translation="MTASTPSRTVKNALYPQLARIGKAVSSPQRLELLHLLSHGEKSV
                     EALAGQTQLTIKNASAHLRVLREARLVEPRKSGQHVYYRLAEAGVATFFLALRELAER
                     RLAEVREVSQHYFGGRRQMTPVDRRQLLSRI"
     gene            565..1245
                     /locus_tag="VF061_01045"
     CDS             565..1245
                     /locus_tag="VF061_01045"
                     /inference="COORDINATES: protein motif:HMM:NF040152.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Pycsar system effector family protein"
                     /protein_id="HEX6668110.1"
                     /translation="MNSEQNGAAIDGCPAWAPASSAAARDIEAQHGRKRKARMERDAV
                     RPPDSWERFRALLEVVDQERNVVEIADHKARYGLVILGVINTILFVLLARGGGFRSLP
                     QWLEPWLSGLVGLYLVLTFLFVLYAIQCLRPRELAGDDSVHRAGILGIMFWEGIIQHD
                     LAKYRREWNEARMDQLTTEAATVAYRIAHLIEAKYRALQRLYTGLVILVGLCTLLLGA
                     YAAWGSVP"
     gene            complement(1251..2705)
                     /locus_tag="VF061_01050"
     CDS             complement(1251..2705)
                     /locus_tag="VF061_01050"
                     /inference="COORDINATES: protein motif:HMM:NF017085.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAD domain-containing protein"
                     /protein_id="HEX6668111.1"
                     /translation="MRLPDVLLELPAEEAARLIALQLLDAARSAHARFGTADPEALHD
                     FRVALRRLRTTLRTYRRQLQDSLRKGQTRRLGRMARATRESRDLEVHLEWTRAQTAGL
                     TAPERAGVDWLVDRMEQRRGKADARLGRTLEREFGPATDRLERRLSRYRATIAAEPVR
                     RSRPAAAEIGERIQRLAHRLQADLGKVQGLSDEEPAHLARISAKRLRYVLEPIAGLVA
                     GVEPFIASLRTLQDQLGDLHDSHVFVAELARAVEDASLIEARRTTDALRSWEGDPAAA
                     GAGLADPREGLLALGRRLRERGEQAFAAVSSGWLGGAADGFFLEVVELASRLAAGQHG
                     REIERKFLLRGLPPAAHAAPPVEIQQGYLPGTRLVERLREVRRNGDARWWRTVKSGTG
                     VSRLELEEETSREVFERVWPLTAGRRVVKRRYCVPSGNLTWEVDEFLDRELVLAEVEL
                     PAADSPVEPPEWLAPYIDREVTDEVEYTNLRLAR"
     gene            2743..>3040
                     /locus_tag="VF061_01055"
     CDS             2743..>3040
                     /locus_tag="VF061_01055"
                     /inference="COORDINATES: protein motif:HMM:NF015608.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family protein"
                     /protein_id="HEX6668112.1"
                     /translation="MAYLWLKAFHIIGVVAWFAGLFYLVRLFVYHVEAAERPEPERAV
                     LQPQFALMERRLYLIITQPAMLVTMLTAVGLLVLQPGWLRDWWLWAKVALVAGLL"
BASE COUNT          419 a         1085 c         1060 g          476 t
ORIGIN      
        1 ctgatccgcg agagcagctg tcgccggtcc accggagtca tctgcctgcg gccgccgaag
       61 tagtgctgcg acacttcgcg cacctcggcg agccgccgct ccgccagctc gcggagcgcc
      121 aggaagaagg tggccacacc tgcctcggcc aggcggtagt acacgtgctg gccggacttg
      181 cgcggctcga ccaaccgcgc ctcccggagc acgcggagat gggcgctggc gttcttgatc
      241 gtgagctggg tctgcccggc gagggcctcg accgacttct ccccatgcga cagcaggtga
      301 agcagctcga gccgctgcgg gctcgagacg gccttgccga tgcgggcgag ctgcgggtag
      361 agcgcgttct tgacggtgcg cgacggggtg gaggcggtca cgggtgctcc tttgactgta
      421 ttctaacgat caatagaata ctggtctacc gcagggcgcg caagccggcg agatactcga
      481 agcgcgacgt gaagcggtct tcatccctcc ctcacgcccc cttcgcggtc gcgaagccat
      541 cgttggatcc ggagcggagg gtgtatgaac tcagagcaga atggtgcggc gatcgacgga
      601 tgccccgcgt gggcgccggc gtcctccgcc gcggcccggg atatcgaggc ccagcacggc
      661 cgcaagcgga aggcccggat ggagcgggat gccgttcgtc caccggacag ctgggagcgg
      721 tttcgcgcgc tgctcgaggt ggtggaccag gagcgaaacg tggtggagat cgccgaccac
      781 aaggccaggt acggcctggt gatcctgggc gtgatcaaca ccatcctctt cgtgctcctc
      841 gcccgcggcg ggggcttccg gtccctgccc cagtggctgg aaccctggct cagcggtctg
      901 gtcggcctct acctggtgct gaccttcctt ttcgtcctgt acgccatcca gtgcctgcga
      961 cctcgcgagc tggccggcga cgattcggtc caccgggccg ggatcctggg catcatgttc
     1021 tgggaaggga tcatccagca cgacctcgcc aagtatcgca gagaatggaa cgaggcgcgc
     1081 atggaccagc tcacgaccga agcggccacg gtcgcgtacc gcatcgccca tctgatcgag
     1141 gccaagtacc gggcgctcca gcggctctac accggcctgg tgattctcgt gggcctctgc
     1201 accctgctcc tgggggccta tgcggcctgg ggctcggtgc cctgaacctg ctagcgggcg
     1261 agccgcaggt tggtgtactc cacctcgtcg gtgacctccc ggtcgatata gggcgccagc
     1321 cattcgggcg gctccaccgg tgagtccgcc gcgggcagct ccacttcggc gaggacgagc
     1381 tcgcggtcga ggaactcgtc gacctcccag gtcagattcc ccgagggcac gcaatagcgg
     1441 cgcttcacca cccgccggcc ggccgtgagc ggccagacgc gctcgaatac ctcccgggag
     1501 gtttcctctt cgagctcgag acgggagacg cccgtccccg acttgacggt gcgccaccag
     1561 cgcgcatcgc cgttccgccg cacctcgcgc aggcgctcca ccagccgggt gcccgggagg
     1621 tagccttgct ggatctccac ggggggagcc gcgtgcgcgg cgggtggcag cccgcgcaac
     1681 aggaacttcc gctcgatctc gcggccatgc tgcccggccg ccagccggct cgccagctcc
     1741 accacctcca ggaagaagcc atccgcggcc ccgccgagcc agccggaaga gacggccgcg
     1801 aaggcctgct cgccgcgctc gcgcagccgt cggcccagcg cgaggagtcc ctctctcgga
     1861 tccgccagcc cggcgccggc ggctgccgga tctccctccc aagagcggag cgcgtcggtc
     1921 gtgcgccggg cctcgatcag cgaggcgtcc tcgaccgctc gggccagctc ggcgacgaag
     1981 acgtgactat cgtggagatc gccaagttgg tcctggagcg tgcgcaggct cgcgatgaac
     2041 ggctcgacgc cggcgaccag gccggcgatg ggctcgagca cgtagcgcag ccgcttggcg
     2101 gagattctgg cgaggtgcgc cggctcctcg tcgctcaggc cctgtacctt gcccaggtcg
     2161 gcctgcagcc ggtgggcgag ccgctggatc cgctcgccga tctccgcggc cgccggccgg
     2221 gagcgccgga cgggctcggc cgctatcgtg gcacggtagc gggacaggcg ccgctccagc
     2281 cggtcggtgg cgggcccgaa ctcgcgctcg agcgtcctgc cgagccgggc gtcggctttc
     2341 ccgcgccgct gctccatccg gtccaccagc cagtcgaccc cggcccgctc gggcgcggtc
     2401 aggccggcgg tctgggcccg ggtccactcc aggtggacct cgaggtcgcg gctctcgcgg
     2461 gtggcgcgag ccatccggcc cagccggcgg gtctgcccct tccgcaggct gtcctgcagt
     2521 tgccgccggt aggtgcgcag cgtcgtgcgc agcctccgga gcgccaccct gaagtcgtgc
     2581 aacgcctcgg gatcggccgt gccgaaccgg gcgtgcgccg accgcgcggc gtcgagcagc
     2641 tgcagggcga tgagccgggc cgcctcctcc gcgggcagct cgaggaggac atcaggaagt
     2701 cgcatggcgg agctcctcca ctctcaggtc tcggagggct gcatggcgta tctctggctc
     2761 aaggccttcc acatcatcgg cgtggtcgct tggttcgccg gcctcttcta tctggtgcgc
     2821 ctcttcgtct atcacgtcga ggcggcggaa cggcccgagc ccgagcgcgc ggtgctccag
     2881 ccgcagttcg cgctcatgga gcgccggctc tacctcatca tcacccagcc ggccatgctc
     2941 gtcaccatgc tcaccgccgt cggcctcctg gtgctgcagc ccggatggct ccgcgactgg
     3001 tggctctggg ccaaggtggc gctggtggcc gggctcctgg
//
LOCUS       DASUYN010000053         2028 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1118020, whole genome shotgun sequence.
ACCESSION   DASUYN010000053 DASUYN010000000
VERSION     DASUYN010000053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2028)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2028)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2028
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1118020"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            75..674
                     /locus_tag="VF061_01060"
     CDS             75..674
                     /locus_tag="VF061_01060"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF023880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016407 - acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar O-acetyltransferase"
                     /protein_id="HEX6668113.1"
                     /translation="MPTEREKMLAGELYDPLDPELVAGRARARDLCPDLNATREADTD
                     GRRRILQALFGTGGETVWMQPPFFCDYGTTIELGERVFFNFNCVVLDVCRVRIGDFTL
                     FGPAVQIYTPMHPMDAGLRRRQEFGKPVEIGSDVWVGGGAVILPGVTVGSRTVIGAGS
                     VVTRSVPEGVFAAGNPCRVIRGLTESPDDPPRPPAPARA"
     gene            complement(676..1611)
                     /locus_tag="VF061_01065"
     CDS             complement(676..1611)
                     /locus_tag="VF061_01065"
                     /inference="COORDINATES: protein motif:HMM:NF039315.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5996 family protein"
                     /protein_id="HEX6668114.1"
                     /translation="MPAPTTDFPRTAAWPPLPLEAWRDTYATLHMWLQVVGKTRLALA
                     PMENHWWQVALYVTPRGLTSSAMPTGTRTLAADFDFLDHQLYLRLSDGATRAIPLAPR
                     SVADFYAAYRDALHSLGVEARIRPVPVEVERAIPFPEDREHDAYDPGAAARCWQILVQ
                     VDRVLKRFRGRFLGKASPVHFFWGSFDMAATRFSGRTAPLHPGGAPNCPDYVMHEAYS
                     HECSSCGFWPGGGAIAAPAFYAYAYPEPPGYADHPVRPDGAYYSREAREFILPYEAVR
                     TAAAPDDAILDFYQSTYEIAADLGHWDRAALDRPA"
     gene            complement(1640..1712)
                     /locus_tag="VF061_01070"
     tRNA            complement(1640..1712)
                     /locus_tag="VF061_01070"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1677..1679),aa:Lys,seq:ttt)
BASE COUNT          304 a          675 c          750 g          299 t
ORIGIN      
        1 gggctacccc gcgctctcgc gctggaagca gcacgagaag gcgatgcggg aggcggggct
       61 ctcctccgga tcggatgccg acggagcgtg agaagatgct cgcgggcgag ctgtacgatc
      121 cgctcgaccc ggagctggtc gccggccggg cccgcgcccg cgacctgtgc ccggacttga
      181 acgcgacccg cgaggccgac accgacgggc ggcggcggat cctccaggcg ctgttcggca
      241 cgggcggcga gaccgtctgg atgcagccgc ccttcttctg tgactacggg accaccatcg
      301 agctgggtga gcgggtcttc ttcaatttca actgcgtggt gctggacgtg tgccgggtgc
      361 ggatcggcga cttcacactc ttcgggccgg cggtgcagat ctacaccccg atgcacccga
      421 tggatgccgg cctgagacgg cggcaggagt tcggcaagcc cgtcgagatc ggatccgacg
      481 tgtgggtcgg cggcggagcg gtcatccttc cgggcgtgac ggtcggctcg cggacggtga
      541 tcggggcggg cagcgtggtg acgcggagcg tgccggaagg cgtgttcgcg gccgggaatc
      601 cctgccgggt gattcgcggt ctcaccgagt cgcccgacga tccgccgcgg ccgcccgctc
      661 ctgcgcgagc atgacctatg ccggccggtc gagcgcggcg cggtcccagt ggccgaggtc
      721 ggcggcgatc tcgtaggtcg actgatagaa gtcgagaatc gcgtcgtccg gcgcggcggc
      781 ggtgcggacc gcctcgtagg gcaggatgaa ctcgcgggcc tcgcgactgt agtacgcgcc
      841 gtcaggacgc accgggtgat cggcgtagcc cggtggctcc gggtaggcgt acgcgtagaa
      901 cgcgggcgcg gcgatcgccc cgccgccggg ccagaaaccg cagctgctgc actcgtgcga
      961 gtaggcctcg tgcatcacgt aatccggaca gttgggtgcg ccaccggggt gcaggggtgc
     1021 ggtgcgaccg gagaaccgtg tcgcggccat gtcgaagctc ccccagaaga agtgcaccgg
     1081 gctcgccttg cccaggaacc ggccgcggaa ccgcttcagc acgcgatcca cctgaaccag
     1141 gatctgccag caccgagccg ccgcgccggg atcgtaggcg tcgtgttcgc ggtcctccgg
     1201 gaatggaatg gcccgctcga cctcgacggg taccggtcgt atccgcgcct cgacgccgag
     1261 ggaatgcagc gcgtcccggt aggcggcgta gaagtccgcc acggaccggg gagccagcgg
     1321 gatggcacgg gtggccccgt cgctgagccg caggtacagc tggtggtcga ggaagtcgaa
     1381 gtccgccgcc agcgtgcggg tgccggtggg catcgccgag ctggtcaggc cgcgcggcgt
     1441 cacatagagc gcgacctgcc accagtggtt ctccatcggc gcgagcgcca ggcgggtctt
     1501 gcccacgacc tgcagccaca tgtggagcgt cgcataggtg tcgcgccagg cctccagcgg
     1561 gagtggaggc caggctgcgg tccgcgggaa gtcggtggtg ggggcgggca tctcgcgctt
     1621 ccggacgagg ggaaaccagt gcgccgggtg ggactcgaac ccacgaccta cgggttaaaa
     1681 gcccgctgct ctaccagctg agctaccggc gcgcaaatcg atcagactcc gaaacctaca
     1741 aactttctgc ccgccctggc actgtaacga gggccggcgg gggtgacccg tgtcaccgac
     1801 gccctccggc tcgaggcgat accaatcggc agcgccccgt cctcatcccc aggccacgat
     1861 ggacaaggac ccagccacgc ccgacctccc cctcattcgc tcggtgctcg tcgtggacga
     1921 cgcgcgggtg gtgcgccggc tcgccttcag ggtgctctcc gagtcgggct accgcgtctt
     1981 cgaggcggcc ggcgccgtgg aggcgatcga ggtgctcgcc atgcttcg
//
LOCUS       DASUYN010000054         2150 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_897528, whole genome shotgun sequence.
ACCESSION   DASUYN010000054 DASUYN010000000
VERSION     DASUYN010000054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2150)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2150)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2150
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_897528"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1449)
                     /locus_tag="VF061_01075"
     CDS             complement(<1..1449)
                     /locus_tag="VF061_01075"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX6668115.1"
                     /translation="MPRTADEAWAAVLTAFDEVVELEDAARQARLGAIGAADPEVHRG
                     VEELLAADSLADAILTPLETVLGERAQDRDPLRLVGRTVSHFRVVGPLAHGGMGVVYR
                     AEDLRLGRPVALKFPLAARYFDPSARQRFRHEARVAAALDHPNLCPVYETGETPEGDL
                     FYSMPLYEGETLRARLARERVLPMEQSLQVAMQLAHGLGAAHQAGIVHRDLKPANVML
                     LPDGGVKILDFGLAKVRDLSLTGSWARLGTIAYMAPEQVRGHGVDARADLWALGVVLH
                     EMVTGDRPFGGGHEIGVAHAILHEEPPPASASREEVPPELDDAIHTLLRKEPSRRYQS
                     AEAVAAALAAIRLGRRGGPLRKLRRNSRRTAVIAAVTLLVTAGGALLARRAATPATSE
                     PISLAVLPFDRIGDSAGTHHLAVGLSDAIGTDLGRLRGVVTPSYVTTSIYRGSPKPLK
                     QIATELQVSAVLRGRVERAGERVRVDARLLAVE"
     gene            complement(1449..1742)
                     /locus_tag="VF061_01080"
     CDS             complement(1449..1742)
                     /locus_tag="VF061_01080"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX6668116.1"
                     /translation="MRARKAAKRGLGTAPMPIEDVTWLADEAVETVAELDVALQRLEA
                     IDERRTRILEQRYFGGLTLEETAETLGISLATVKRELRSARAWLARELQRELP"
BASE COUNT          286 a          802 c          767 g          295 t
ORIGIN      
        1 ctccaccgcg agaagccggg cgtccactcg cacccgctcg cccgcccgtt ccacccgtcc
       61 gcggagcacg gcggagacct gcagctcggt cgcgatctgc ttcagcggct tggggcttcc
      121 gcggtagatc gaggtggtga cgtagctcgg ggtcacgacc ccccggagcc gtcccaggtc
      181 cgtcccgatc gcgtcgctca gccccaccgc caggtggtgg gtgccggcgc tgtcgccgat
      241 gcgatcgaac ggcagtacgg cgagcgagat cggctccgac gtcgccggcg tcgcggcccg
      301 gcgcgccagc agcgcgcctc ccgcggtcac gaggagcgtc acggccgcga tcacggcggt
      361 ccgccgcgag ttgcgccgca acttccgcag cggtccgccg cggcggccga gccggatcgc
      421 cgccaacgcc gccgccaccg cctcggcgga ctggtaacgc ctcgacggct ccttgcggag
      481 cagggtgtgg atggcgtcgt ccagctcggg cggaacctcc tcccgcgacg ccgaggccgg
      541 aggcggctcc tcgtgcagga tcgcgtgggc caccccgatc tcgtggcccc caccgaacgg
      601 ccggtctccg gtcaccatct cgtgcagcac cacgccgagc gcccacaggt cggcgcgcgc
      661 gtccacgccg tgcccacgca cctgctccgg cgccatgtag gcgatcgtcc ccagccgggc
      721 ccaggagccg gtgaggctga ggtcgcgcac cttggccagg ccgaaatcca ggatcttcac
      781 cccgccgtcc ggcagcagca tcacgttggc cggcttgaga tcgcggtgca cgatgcccgc
      841 ctggtgcgcg gcgccgagcc cgtgggcgag ctgcatggcc acctgcagtg actgctccat
      901 cgggaggacg cgctcgcgcg cgagccgcgc cctgagggtc tcgccctcgt agagcggcat
      961 gctgtagaag agatcgccct cgggggtctc gcctgtctcg tagaccgggc acaggttggg
     1021 gtgatcgagg gcggcggcca ctcgcgcctc gtgtcggaag cgctgcctgg cggaggggtc
     1081 gaagtagcgg gcggcgagtg ggaacttgag ggcgacgggg cggccgagtc ggaggtcttc
     1141 ggcccggtag accacgccca tgccgccatg ggcgaggggc ccgacgaccc ggaagtgcga
     1201 gacggtgcgt cccaccagcc gcaggggatc gcggtcctgc gcccgctccc cgaggacggt
     1261 ttcgagcggc gtcaggatcg catcggccag cgagtcggcc gcaaggagct cttcgactcc
     1321 acggtgcacc tccggatcgg cggcgccgat cgcaccgagg cgcgcctgcc gcgccgcgtc
     1381 ctccagctcg accacctcgt cgaacgcggt caggaccgcc gcccacgcct cgtccgcggt
     1441 ccgcggcatc acggcagctc gcgttgcagc tcgcgggcga gccaggcccg cgccgaccgg
     1501 agctcgcgct tgaccgtcgc cagcgagatc ccgagcgtct ccgccgtctc ctccagggtc
     1561 agcccgccga agtagcgctg ctccaggatc cgggttcggc gctcgtcgat ggcctccagc
     1621 cgctggagcg ccacgtccag ctcggccacc gtctcgaccg cctcgtcggc gagccaggtc
     1681 acgtcctcga tcggcatcgg ggccgtgccg agcccgcgct tggcggcctt ccgcgcgcgc
     1741 atgatccacc aggaggtgcc gcatgatgcg cgaggccagg ccgaggaagt ggccgcggtc
     1801 ccggacgctc acccggggcg agtccaccag cttcaggtag gcctcgtgca ccagcgcggt
     1861 ggtgttcagg gagccgtcgg gctcgttcct gagccgctga tgcgcgagct gccgcatccg
     1921 gtcgtacatg agagggaaga gctggtcgag ggcctcggca tcgccctccc cccagcggcg
     1981 gagaaggtcc gtgatgtccg tcgggagcac caaccggtct ccgttgggga gggcatcgac
     2041 ccagccggct cgaaaggaga atcccagtcg attctaaggc tggcctcccc cccgtcaagc
     2101 actcggcggt gcggctcccc cggccgtggg cggcgccggc cctatcgggt
//
LOCUS       DASUYN010000055         3284 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_237480, whole genome shotgun sequence.
ACCESSION   DASUYN010000055 DASUYN010000000
VERSION     DASUYN010000055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3284)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3284)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3284
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_237480"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1644
                     /locus_tag="VF061_01085"
     CDS             <1..1644
                     /locus_tag="VF061_01085"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX6668117.1"
                     /translation="LLVEAGSALGYAAQRGIVHRDIKPDNIMFDEFGQCLLTDFGIAK
                     AASGQRLTGTGMSIGTPHYMSPEQARAQGIDGRSDIYSLGVVAYQALTGTVPYDGEDS
                     FSIGYKHITEPVPTPQLITADERRLFEVIKRMLMKDPADRFQSCEELVASLQGQPIAA
                     AGSVRASVATAGVGAAAGGPTVPSPALGGPALIVSQPTTPLDSPLVNRRATPRERRDL
                     PRRVADRSVAMRRATSSGLGWLWLALAIAGGVGGAVYYYSQRGFAPFAAAAAVGDSAS
                     VPRAGAAGDSAAVPPASATPAADSSPAAAPGVAPGSAATPPPVAAADSAPRAPSASPV
                     RPPSTSRRTPRASAPTPAASPSDSGSVRLVGLPRGSTVLINERPVVDPVTSLPAGPHV
                     LAVSAPRFNFFTDTIVIVAGDTLDLTPELQPVGAPVPAASEPAAQPARERQTVDRCSP
                     GRAYNAAACFDERPKPVEPPFVPLPDGLAGTPRPSQLWVKVSAEGRTVDIERLRPSDD
                     STFERAARDFAWSVTWHPALKDGAPVEAWTQMLFPPQPQ"
     gene            1608..2159
                     /locus_tag="VF061_01090"
     CDS             1608..2159
                     /locus_tag="VF061_01090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HEX6668118.1"
                     /translation="MDPDALPPAAAVATLPDIHPTAWIAPSAAVMGDVTMGAESSVWY
                     GAVLRGDMAPIVIGAQTNLQDGTLVHVDEDVPCRIGSRVGVGHRVILHGCTVDDECLI
                     GMGAVLLNHVRVASGSVVAAGAVLPEGMQVPPRSVVMGVPARIVRPVDDRLARRITET
                     WMHYVKQAQAHHAGHFPLLQPGD"
     gene            2551..>3284
                     /locus_tag="VF061_01095"
     CDS             2551..>3284
                     /locus_tag="VF061_01095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide reductase N-terminal alpha
                     domain-containing protein"
                     /protein_id="HEX6668119.1"
                     /translation="MKTSTPRDAVQLSPNAVTVLEKRYLVKDDGGRPVETPSDLFWRV
                     ARTVAEADRKYGAGDRQVEQSALEFYDIMATRRFMPNSPTLMNAGRPLGQLSACFVLP
                     VDDALSNGKSGIYDTLRAMALVHQSGGGTGFSFSRLRPKNDIVRSTMGVASGPVSFMS
                     LFDASTDVVKQGGTRRGANMGILRVDHPDIMEFVTCKDDTTKITNFNISVAVTDKFME
                     AVDKDEEYDLIHPKTGKVTGQLKARDV"
BASE COUNT          477 a         1175 c         1164 g          468 t
ORIGIN      
        1 ctcctggtcg aggccggcag cgcgctcggc tacgcggccc agcgcgggat cgtgcaccgc
       61 gatatcaagc ccgacaacat catgttcgac gagttcgggc agtgcctgct cacggacttc
      121 ggcatcgcca aggcggcgtc gggccagcgg ctcaccggga ccgggatgtc catcggcacg
      181 ccgcactaca tgagcccgga gcaggcccgg gcccagggca tcgacggccg cagcgacatc
      241 tacagcctgg gcgtggtggc gtaccaggcg ctcaccggca ccgtgcccta cgacggcgag
      301 gacagcttct ccatcggcta caagcacatc accgagcctg tgcccacgcc tcagctcatc
      361 acggcggacg agcggcggct gttcgaggtg atcaagcgga tgctgatgaa ggatcccgcc
      421 gaccgcttcc agagctgcga ggagctggtg gcctcgctcc agggccagcc gatcgcggcg
      481 gccggaagcg tgcgcgcgtc ggtggcgacg gccggcgtcg gcgccgccgc gggtggaccc
      541 acggtgccga gcccggcgct gggcggcccc gccctgatcg tgagccagcc gaccacgccg
      601 ctcgattcac ccctggtgaa ccgccgggcg accccgcgcg agcggcgcga tctgccgcgg
      661 cgcgtggccg atcgctcggt ggcgatgcgg cgggcgacga gctccgggct gggctggctc
      721 tggctggcgc tcgccatcgc gggcggcgtg ggtggggcgg tgtactacta cagccagcgc
      781 ggcttcgccc cgttcgccgc ggcggcggcg gtcggcgact ccgcctcggt tccacgggca
      841 ggtgccgcgg gcgacagcgc ggcggtcccg ccggcgagcg ccacgccggc cgcggactcg
      901 tcgccggcgg ccgcgcccgg ggtcgctccc ggttccgccg caacgccgcc gccggtcgcc
      961 gcggccgatt cggccccgcg ggcgccgtcc gcgtcgccgg tgcgcccgcc ctcgacctcg
     1021 cgccgcacgc cgcgcgcctc cgcgcccacg cccgcggcgt cgccgtccga cagcgggagc
     1081 gtgcgcctgg tgggtctgcc gcggggctcg accgtgctga tcaacgagcg gcccgtggtg
     1141 gaccccgtca ccagtctccc cgccggtccg cacgtgctcg ccgtctcggc gccgaggttc
     1201 aacttcttca ccgatacgat cgtcatcgtc gcgggcgata cgctggacct gacgccggag
     1261 ctccagcccg tgggcgcgcc cgtgccggcc gcctccgagc cggcagccca gcccgcgcgg
     1321 gagcggcaga cggtggatcg ctgctcgccg ggacgggcct acaatgcggc ggcgtgcttc
     1381 gacgagcgtc ccaagccggt ggagccgccc ttcgttccgc tgccggacgg tctcgccggc
     1441 acgccgcggc cctcgcagct gtgggtgaag gtgtcggcgg aggggcgcac ggtggacatc
     1501 gagcggcttc ggccgtcgga cgactccacc ttcgagcgcg ccgcgcgcga cttcgcctgg
     1561 agcgtgacct ggcacccggc gctcaaggac ggcgcgccgg tcgaggcgtg gacccagatg
     1621 ctcttccccc cgcagccgca gtagccaccc tgcccgacat ccatcccacc gcgtggatcg
     1681 cgccgagcgc cgccgtcatg ggagacgtga cgatgggggc ggagtcgagc gtgtggtacg
     1741 gcgccgtgct gcgcggcgac atggctccca tcgtgatcgg ggcgcagacc aacctccagg
     1801 acggcaccct ggtgcacgtg gacgaggacg tgccctgccg catcgggtcg cgcgtcgggg
     1861 tggggcaccg ggtgatcctc cacggctgca cggtggacga cgagtgcctg atcgggatgg
     1921 gggccgtgct gctcaaccac gtccgggtcg cgagcggcag cgtggtcgcc gcgggcgccg
     1981 tgctgccgga ggggatgcag gtgccgccgc ggtcggtggt gatgggggtg cccgcgcgga
     2041 tcgtccggcc ggtggacgac cgcctggcgc ggcggatcac cgagacctgg atgcactacg
     2101 tgaagcaggc ccaggcgcat cacgccggtc acttcccgct gcttcagccc ggggactaga
     2161 gcaggacgtg taggaccact gacagggggg ctccctccta agcgctggca gcatgaggca
     2221 catctgtcac accaaactgc catagcgcct gctttcgccc cctcgctccg cccagggtga
     2281 caagggccta aacacctggg caacatccac atcggtgcac cttttccaca ccacacacaa
     2341 tccccggaag tgtgattatt tttgtgatgt gggaagcgag atcgcgcgca acggcgcggc
     2401 ttttcggcac tattgtgccc ctccagcggc cgtcctactt tgcccatccg ctgttcgcgg
     2461 aactgtaggt acggacatta tgtcggacga catcgccggg gtcgtcgcgc cactctcgcc
     2521 tcactcattt ctctgcaagc ggggagcact atgaaaacgt ccaccccacg ggacgcggtt
     2581 cagctatcgc ccaacgccgt cacggtactg gagaagcggt acctggtgaa ggacgacggc
     2641 ggacggccgg tggagacacc gagcgacctg ttctggcggg tggcgcgcac ggttgcggag
     2701 gcggaccgga agtacggcgc gggcgaccgg caggtggagc agtcggccct ggagttctac
     2761 gacatcatgg cgacccggcg gttcatgccg aactcgccca ccctgatgaa cgccggccgg
     2821 cccctcggcc agctctccgc ctgcttcgtg ctgccggtgg acgacgcgct ctccaacggc
     2881 aagagcggga tctacgacac cctgcgggcg atggccctgg tgcaccagtc gggcggcggc
     2941 accgggttca gcttctcccg cctccggccc aagaacgaca tcgtgcgctc caccatgggc
     3001 gtggcctcgg gcccggtgtc gttcatgagc ctgttcgacg cctcgaccga cgtggtgaag
     3061 cagggcggca cccgccgcgg ggccaacatg ggcatcctgc gggtggacca ccccgacatc
     3121 atggagttcg tcacctgcaa ggacgacacg accaagatca ccaacttcaa catctcggtc
     3181 gcggtgacgg acaagttcat ggaggcggtg gacaaggacg aggagtacga cctgatccac
     3241 cccaagaccg gcaaggtcac cggccagctg aaggcgcgcg acgt
//
LOCUS       DASUYN010000056         2929 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_16411, whole genome shotgun sequence.
ACCESSION   DASUYN010000056 DASUYN010000000
VERSION     DASUYN010000056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2929)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2929)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2929
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16411"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..598)
                     /locus_tag="VF061_01100"
     CDS             complement(<1..598)
                     /locus_tag="VF061_01100"
                     /inference="COORDINATES: protein motif:HMM:NF015649.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BTAD domain-containing putative transcriptional
                     regulator"
                     /protein_id="HEX6668120.1"
                     /translation="MLQLQILGSPAVSGSGGRRGGAAAQRKAIALLAVVAGAGRRGVS
                     RDKVLAMLWPETPADRAAHRLTQLLYSLRRDLLVPDLFLGTSELRLNPDVLAVDLAEF
                     TAALEAGDFARAAAVYGGAFLDGFYLSDSPEFEHWVEEERTRLAQRHSAALEALARAA
                     GAEGDPVVAVGWWRRLAGAEPLNARVIVCCMEALAAAGD"
     gene            737..1285
                     /locus_tag="VF061_01105"
     CDS             737..1285
                     /locus_tag="VF061_01105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668121.1"
                     /translation="MPRLRIAYVLAAIGAPVLTAAALSTAPQSDRIAVSGVFSMKVGQ
                     QQALPVGDQAGPVLLLTQSAGTNRNTGKSDYMDGAEVINREIADLTQGNGSHQGYLTE
                     IKGADTSLARWHGKVATTLGPDQKPVTSFEGTWSKVGGTGKYAGVSGTGRYQGRMLSP
                     TDYTVEWSGEIVTQRTALRRTP"
     gene            1282..>2929
                     /locus_tag="VF061_01110"
     CDS             1282..>2929
                     /locus_tag="VF061_01110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668122.1"
                     /translation="MTPQAALAEDRPAVAAVRPTDQRRLDETVARLREAAPGFARIGI
                     PERIALARSMQAGYLRVAEQMVRAGCAAKGLLPGSPSEAEEWATGPWPVVRHLRLVAE
                     ALASLQRTGNTPIGKIHRTADDRLSVRVFPASAIDGVLFGGITVDVRMEARIGEAELH
                     GSRAPFYRGQRHDGRTVLILGAGNLAGIPAMDLVTKLFNEGKVCLLKMNPVNAYLGPL
                     MEDAFAEAIRRNFVAVVYGGAEEGGYLAQHSGIDEIHLTGSDATYETLMWGAAGPERD
                     ARKARGATLLSKPVTAELGNVTPVLIVPGPYTERELAFQAEGIAGAVAHNASFNCNAP
                     KMLVTPGAWPRRPDLLAAIERVLAGVPARRAYYPGAEERWRRLTEGREVVRTVGAAGP
                     GALPWTLLPGLDATNPREPAFTTEPFCSILSETEVGSDDPVEFLERGVDFANNRLWGT
                     LSAELVVHPSSLKDPAIAQAVERAIARLRYGVVTVNAWSGFAFVYGTPPWGAYPGSTP
                     ANIRSGTGWVHNTPMLEGIEKAVMRHPLTIMPKPPTFPSHR"
BASE COUNT          453 a         1054 c         1036 g          386 t
ORIGIN      
        1 gatcgccggc ggcggcgagc gcctccatgc agcatacgat cacccgggcg ttcaggggct
       61 ccgccccggc gagccgtcgc caccagccca ccgccaccac gggatcgcct tcggcgccgg
      121 cggcccgggc cagcgcctcc aatgccgcgg aatgccgttg cgccagccgg gtccgctcct
      181 cctccaccca atgctcgaac tcgggggagt cgctcaggta gaacccgtcc aggaaggcgc
      241 ccccgtagac cgcggcggcg cgagcgaagt ctcccgcctc gagcgcggcg gtgaactcgg
      301 ccagatcgac cgcgagcacg tcgggattga gccggagctc cgaggtcccg aggaacagat
      361 cgggcaccag gagatcccgg cggaggctgt agaggagctg ggtgaggcgg tgggcggccc
      421 gatccgcggg agtctcgggc cagagcatgg ccaggacctt gtcccggctg actccgcggc
      481 gtccggcacc ggccacgacc gccagcaggg cgatcgcctt gcgctgtgcc gccgcgccgc
      541 cgcgtcgccc accgctcccg ctcaccgcgg ggctgccgag aatctgaagc tgcagcatgc
      601 cgagaccgcc cgggaaagag ccccggccga gccatatgag ttctgtctga ggtccgtggg
      661 ctattgtagg tcccgtgcgc accgggtgca agcgacggcc cggccgccat cggcccccat
      721 cacggaggat atactcatgc cgagactcag gatcgcctac gtgctggccg cgatcggcgc
      781 gccggtgctg acggcagccg cactgtccac ggcgccccag tcggatcgga tcgcggtgtc
      841 cggcgtgttc tcgatgaagg tcggccagca gcaggctctg ccggtgggcg accaggcggg
      901 gccggtcctg ctcctcaccc agtcggccgg gaccaaccgc aacaccggca agtccgacta
      961 catggacggc gccgaggtga tcaaccgcga gatcgcggac ctgacgcagg gcaacgggtc
     1021 gcaccagggc tacctcacgg agatcaaggg cgccgacacc tcgctggccc gctggcacgg
     1081 caaggtggcg actaccctcg gcccggacca gaagccggtc accagcttcg agggcacctg
     1141 gtcgaaggtc ggcggcaccg gcaagtacgc gggcgtctcg ggcacgggcc gataccaggg
     1201 acggatgctc tccccgaccg attacacggt cgaatggagc ggcgagatcg tcacccagcg
     1261 caccgccttg cggaggacac catgacaccc caggccgcac tcgccgagga caggcccgcc
     1321 gtcgccgccg tccgcccgac ggaccagcgc cggctggacg agaccgtggc gcggctccgg
     1381 gaggccgcac ccggcttcgc ccggatcggg ataccggagc ggatcgccct cgcccgctcc
     1441 atgcaggccg gctatctccg ggtcgccgag cagatggtcc gagccggctg cgccgcgaaa
     1501 gggctgctcc cgggcagccc ctcggaggcg gaggagtggg cgacgggccc atggcccgtg
     1561 gtccgccacc tccggctcgt cgcggaggcg ctcgcgtcgc tccagcgcac cggcaacacg
     1621 ccgatcggca agatccaccg gaccgcggac gaccggctca gcgtgcgggt gtttcccgcc
     1681 agcgcgatcg acggcgtgct ctttggcggc atcacggtgg acgtccggat ggaggcccgg
     1741 atcggcgaag cggagctgca cgggtctcgc gccccgttct atcggggcca gcgtcacgac
     1801 ggccgcaccg tcctgatcct gggggcgggc aatctcgccg ggatccccgc catggatctc
     1861 gtcaccaagc tgttcaacga ggggaaggtc tgcctgctca agatgaaccc ggtcaatgcc
     1921 tacctcggcc cactcatgga ggacgccttc gccgaggcca ttcgaaggaa cttcgtggcg
     1981 gtggtgtacg gcggtgccga ggagggcggg tacctggctc agcactccgg catcgacgag
     2041 atccacctca ccggctcgga cgcgacctac gaaacgctga tgtggggcgc ggccgggccc
     2101 gagcgcgacg cgcgcaaggc ccgtggcgca acgctcctct ccaagccggt gacggcggag
     2161 cttggcaatg tcacgccggt gctcatcgtg cccggcccct ataccgagcg ggagctggcg
     2221 ttccaggccg agggcatcgc cggagcggtg gcccacaacg cctcgttcaa ctgcaacgcg
     2281 ccgaagatgc tggtcacgcc gggggcctgg ccgcggcgcc cggacctgct ggcggccatc
     2341 gagcgggtgc tggccggcgt cccggcgcgc cgggcgtatt accccggggc cgaagagcgc
     2401 tggcggcggc tcaccgaggg acgcgaggtg gtgaggacgg tgggcgcggc cggccccgga
     2461 gcgctcccgt ggaccctgct tcccgggctc gatgccacga atcctcggga gccggcattc
     2521 acgaccgagc cgttctgctc gatcctctcg gagacggagg tcggcagcga cgatccggtc
     2581 gagttcctcg agcgcggcgt ggacttcgcc aacaaccgtc tctggggcac cctgtcggcg
     2641 gagctggtcg tgcatccgtc gtcgctcaag gaccccgcca tcgcccaggc ggtcgagcgc
     2701 gccatcgcgc ggctccgcta cggcgtggtg accgtgaacg cctggagcgg cttcgccttc
     2761 gtgtacggga cgccgccgtg gggtgcgtac cccggctcca cgccggcgaa cattcggagc
     2821 ggcaccggat gggtacacaa cacgccgatg ctggagggga tcgaaaaggc cgtgatgcgg
     2881 cacccgctca ccatcatgcc caagccacct acgtttccga gtcaccgca
//
LOCUS       DASUYN010000057        10290 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1559708, whole genome shotgun sequence.
ACCESSION   DASUYN010000057 DASUYN010000000
VERSION     DASUYN010000057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10290)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10290)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10290
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1559708"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1017)
                     /locus_tag="VF061_01115"
     CDS             complement(<1..1017)
                     /locus_tag="VF061_01115"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase family protein"
                     /protein_id="HEX6668123.1"
                     /translation="MTRPPVYLDHAATTPVRPEVLEAMLPYLTNQAFGNPSSAHRFGR
                     AARAGIEQARREVAQAVGAEPNQVIFTSGGTEADNLGIIGAALAARERGGPVCVVVSA
                     IEHKAVLAAAHAVCHLGGREIVLPVDRLGRVSLEALERALAERPAVVSIMWVNNEVGV
                     VQPVAEIARRCSEAGVVFHTDAVQAFGKLPVSMADLPCTLLTLSGHKIGAPKGIGALV
                     VRDRKAVEAIIHGGGQQHGIRPGTENVAGAVALGRATLLAAREQAEEAPRLRALRERL
                     AERLRDGVSDLSVNGEGAETAPHVLNVSVAGADSEALLMHLDLAGVAASSGSACSTGS
                     VEPSH"
     gene            complement(1063..1779)
                     /gene="bshB1"
                     /locus_tag="VF061_01120"
     CDS             complement(1063..1779)
                     /gene="bshB1"
                     /locus_tag="VF061_01120"
                     /inference="COORDINATES: protein motif:HMM:TIGR04001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019213 - deacetylase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacillithiol biosynthesis deacetylase BshB1"
                     /protein_id="HEX6668124.1"
                     /translation="MPVDILAIAAHRDDVELTCAGTLLKAVDAGHRAGILDLTAGETA
                     SRGSAQLRAEEARLAAEILGVSERRNAGLPDAHLQNSEEMRQVVVAEIRHFAPRVVIL
                     PFPVGRHPDHRVASELGRDACFLAGLARYDAPGAPHRPHKILYALSYREDPLKPTFVV
                     DISLQFERKLAAIRCYASQFEGAKAAGEIFPTGQDLYSLVETQSAHYGSLIRTRYGEP
                     FYTHETLAVDDVLALGVQSM"
     gene            complement(1919..2821)
                     /locus_tag="VF061_01125"
     CDS             complement(1919..2821)
                     /locus_tag="VF061_01125"
                     /inference="COORDINATES: protein motif:HMM:NF025616.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4349 domain-containing protein"
                     /protein_id="HEX6668125.1"
                     /translation="MRIRTMVLVLLQVGLLAACEGAARSDESVINTGAAANAPGSAKQ
                     SADAIAIGAVGERTEAPGAAEPAAEEQWFRPTTTDPMDRLIVRTGQASIEVDSLEAAM
                     VRLRQVAQRAGGFVADASVQSGRNQVRHATLELKVPAARFDELTEGLQPIGRLEFVNV
                     SADDVSEEFVDLTARAANGRRLEERLVELLRTRTGKLQDVLSVERELARVREEIERIE
                     GRLRYLKASAQLSTLSVSLHEPMPIVATQGRGPIMEAFRAAWRNFVGVLTAAIASLGY
                     LVPVLGLGWAVVVAGRRWRKPAAA"
     gene            complement(2900..4138)
                     /locus_tag="VF061_01130"
     CDS             complement(2900..4138)
                     /locus_tag="VF061_01130"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX6668126.1"
                     /translation="MLLRSVGEGAAIALDSIRANKLRSALTILGVVIGVTTVMAVASL
                     VQGIRRQIFNAIEVAGPTTFYVIRYFSQTPLNPDRLPYEVRIRPVLQRGDAEAIRRLP
                     EVRYAGIWVQVFQKIEYQGVRTQQVIVFGADDRYMDIQGGTLLRGRFFSRAELAGEPV
                     IVLESAAADRLFGRLDPMGKQVRVGGVSFRVIGIFEKPSNIFEPPGQATGGVVPFATA
                     RENFQYDETNALFIAVKPRSGIEVGPAMDAVTVALRRTRNLRPGDPNSFDLITQDQIL
                     DVVGNFTSYFFLAMVALSSVALLVGGIGVMAIMMVSVSDRTKEIGLRKALGATRREVL
                     WQFLVEAATLTLVGGALGIAFGLLAGMALKALMSLESAVPLWSIVLACGVSIAIGLVF
                     GLLPANRAARMDPVEALRHE"
     gene            complement(4142..5386)
                     /locus_tag="VF061_01135"
     CDS             complement(4142..5386)
                     /locus_tag="VF061_01135"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX6668127.1"
                     /translation="MPLSEALRLAVQAIWTSKLRSFFTLLGILVSVAFLIVVVAIIQG
                     MNAYVSGTLTASMIGTNTFQVRRGPISVSLMDDDQVREIAKRPLVTVADAEAVAAAVP
                     EAVAVALQSGWPSPVGEMRYRDRTVANVGVLGVTAPYQAVQDYVYLAGAPLTDQDVSG
                     RRPVVALGHEIADKLFDDPLTAVGKRVRLDGRELTVKGVIAPKGRLLGQSFDAFVLLP
                     FSTFEAAYGARKTTVVSVKMPDAESIEAGMARAEEAMRIAHRLRPGEDNDFTVDKADA
                     LIAFWKQLTSLLFTAIPAVVAIGIVVGGIVIMNIMLMTVNERTREIGLRKSLGATRAD
                     IRRQFLVEALVLTSTGGALGVLSGWVLAFGVSTFTPLPARITLWSVLLALLVGTAAGT
                     IFGVYPATRASRLDPITALRME"
     gene            complement(5591..6853)
                     /locus_tag="VF061_01140"
     CDS             complement(5591..6853)
                     /locus_tag="VF061_01140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX6668128.1"
                     /translation="MSAPKAVTLLFRMVEGAGIALDSLRSNKVRAALTVLGVAIGVMV
                     VIAMGSAITGINRSITGILESAGPKTFVVVRYFSGGLEISDGSDELSPWRRMPEVTVE
                     EADLIRSLPAVRDVNLGEYTEGPVNGGGTDLSDVKIAGFSWTWPQVNGGDILAGRNFT
                     AIEYAAGSRVAVINDKLAESLFPGLDPIGKQIKIYGVPFEVVGMHAEAASLFTNADEP
                     RLAIPHTTFRKVTEYWPGWMEVAVIPTEAATVAEAQDQVTAALRSRRGLRPAEENNFA
                     LVTSDRVLDAFNKITAGFFVAMIALSSVGLMVGGVGVVAIMMISVTERTREIGVRKAL
                     GATRGEIMFQFLVEAATLTLVGCLIGMALGAGVAWGVRSFTPVPASVPLISVIAAVVA
                     SILTGVLFGLYPANKASKLDPVEALRYE"
     gene            complement(6850..8091)
                     /locus_tag="VF061_01145"
     CDS             complement(6850..8091)
                     /locus_tag="VF061_01145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX6668129.1"
                     /translation="MPVFEAIRLALRTIRSQKLKSFFSLVGVLIGVTFLIAVVSIVQG
                     MNRYMVDRFANTLVGANTFELRQRPSINMGHTTREMWMEWLRRPRVSYDDADFVRDRI
                     GIPATFAKFCQDRVSVHYDGKVAKDVDLIGTEESYFGIRNYEVVAGRAFTAQEVRAAL
                     PVLVIGDEVARRLLPGVDPIGKEVRIGGLPYRIIGVVAPQGTLFGLSLDKFAVMPFNA
                     PGRRLICPINILDALIVQTDDPVQMQLAMGQAEAAMRSRRQLKPDQDNNFHFQTAEGA
                     LGTWDRISRILFLALPGLVAISLVVGGIVIMNIMLMAVSERTREIGIRKALGARRRDI
                     LAQFVVESATLSAAGAVMGIGLGLLLAFVVKALTPLPAAVAPWSVALGVVLGVTVGIV
                     AGVYPASRASRLDPIVALRAE"
     gene            complement(8127..8825)
                     /locus_tag="VF061_01150"
     CDS             complement(8127..8825)
                     /locus_tag="VF061_01150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX6668130.1"
                     /translation="MTAIIRIRDLAREYRMGSERILALRGVTLEIHRNEYVAIMGPSG
                     SGKSTMMNVLGCLDTPSAGEYWLNGEEVSRLTDDALARVRNREIGFVFQTFNLLPRAT
                     ALHNVELPLVYAGVRARERRQRAAAALHRVGLGERMDHRPNELSGGQRQRVAIARALV
                     NEPSILLADEPTGNLDSVTSDEIMEVFAALHAAGQTVIMVTHEPDIAARSERRIILRD
                     GRVESDHVSREAAA"
     gene            complement(8822..10114)
                     /locus_tag="VF061_01155"
     CDS             complement(8822..10114)
                     /locus_tag="VF061_01155"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX6668131.1"
                     /translation="MSRGMKVGLIIGVLALAGGGGIAYSLNKKKNAGTEVRMEQVARR
                     DLVSAVTASGKIEPQTSVDISADITGRIIDIAVEEGDRVRKGQFLLQIDPAQYQAAVS
                     RAEGVVSSTQATLLQVRANRDQAERAWKRADQLSRLGPNLIAPAQAEEARTALDVAEA
                     TYQATRAQLDQSRASLQEAKDNLAKTRLMSPIAGRVVRLAVEEGEVAVPGTFSRETGL
                     LLTIADLSVILAKVQVDETDVVRLSHNDSVEVTIDAYPDSAFMGRVIRVSQSAKLTNT
                     QTASGSNDRAVDFDVEIRLDTPPGDIRPDLSCTARIITDTREGALSIPIIALTVRDHE
                     RVPNENNPALDTVSRRRPGEREEEGVFLVQNGVATFRPVKVGIAGDEYFEVLDGLRGG
                     ETIVAGTYQAIRDLKDGDKVRVAEDTTEAPADRQQAAT"
BASE COUNT         1554 a         3707 c         3503 g         1526 t
ORIGIN      
        1 gtgcgagggc tcgaccgagc cggtggagca ggccgagccg ctggaggcgg cgacgccggc
       61 gaggtccagg tgcatcagga gagcctcgct gtccgccccc gccacggaga cgttgagcac
      121 gtggggcgcc gtctccgccc cctcgccgtt cacgctcagg tcggagacgc cgtcgcgaag
      181 ccgctccgcc agccgctccc gcagcgcgcg aagcctcggc gcttcctcgg cctgctcccg
      241 tgccgcgagg agagtcgccc ggccgagcgc cacggcgccg gccacgttct cggtcccggg
      301 ccggatgccg tgctgctggc cgccgccgtg gatgatggcc tcgaccgcct tgcggtcgcg
      361 cacgacgagc gctccgatgc ccttgggcgc cccgatcttg tggccggaga gggtgaggag
      421 ggtgcagggc aggtcggcca tggagacggg gagcttgccg aaggcctgca ccgcatcggt
      481 gtgaaagacc acgccggctt cgctgcaccg gcgggcgatc tccgccaccg gctgcaccac
      541 cccgacctcg ttgttcaccc acatgatgga caccaccgcc ggccgctccg ccagggcgcg
      601 ctccagcgcc tcgaggctca cccggccgag ccggtccacc ggaagcacga tctcgcggcc
      661 gcccagatga cagaccgcgt gtgccgcggc gagcaccgcc ttgtgctcga tggcgctcac
      721 caccacgcac accgggccgc cgcgctcccg agccgccagg gccgccccga tgatgccgag
      781 gttgtcggcc tcggtgccgc cggaggtgaa gatcacctgg ttgggctccg cccccaccgc
      841 ctgggccact tcccgccggg cctgctcgat gcccgcgcgc gcggcccggc cgaaccggtg
      901 tgcgctggac gggttgccga acgcctggtt ggtgagatag ggcagcatcg cctccagcac
      961 ctcggggcga accggggtgg tggcggcgtg atcgaggtag accgggggcc gggtcatggc
     1021 gcctgaaaaa tacccgtccc gggggacggg tccaagcagg cgctacatgc tctgcacgcc
     1081 gagcgcgagg acatcgtcca cggccagggt ctcgtgggtg tagaacggct cgccataacg
     1141 ggttcggatg agggagccgt agtgggcgct ctgggtctcg accagggagt acaggtcctg
     1201 cccggtgggg aagatctccc ccgccgcctt ggcgccctcg aactggctcg catagcagcg
     1261 gatggcggcg agcttgcgct cgaactgaag gctgatgtcc accacgaagg tgggcttcag
     1321 ggggtcctcc cggtacgaga gcgcatagag gatcttgtgc ggccggtggg gggcgcccgg
     1381 cgcgtcgtag cgtgccaggc ccgcgaggaa gcaggcatcc cgtcccagct cggaggcgac
     1441 ccgatggtcg gggtgacggc cgacgggaaa ggggaggatc acgacccgcg gcgcgaagtg
     1501 ccggatctcc gcgaccacca cctgccgcat ctcctcgctg ttctgcaggt gcgcgtcggg
     1561 caggcccgca ttgcgtcgct cgctcacgcc gaggatctcc gccgccagcc tcgcctcctc
     1621 ggcccgcagc tgggcgctgc cgcggctggc ggtctctccg gcggtcaggt ccaggatgcc
     1681 cgcccggtgc ccggcatcca ccgccttgag cagcgtgccg gcgcaggtga gctcgacgtc
     1741 gtcgcggtgc gcggcgatgg ccaggatgtc cacgggcatg ggaaggggct gggttgagac
     1801 aagggaacag tacagcggga ccgctgaaaa gtgaaaagtg aagcggaagg cgtccggccc
     1861 tccgcttcac attccacgct tcagccttca ggcctgccgt cgtgcggcct gcccgtgctc
     1921 acgccgccgc gggcttcctc caccgccggc cggccacgac tacggcccag ccgagcccca
     1981 gcaccggcac caggtacccg agggacgcga tcgcggcggt gagcacgccc acgaagttcc
     2041 gccacgccgc ccggaatgcc tccatgatgg ggccccggcc ctgggtggcg acgatgggca
     2101 tcggctcgtg caggctcacg gagagcgtgc tcaactgcgc gctcgccttg aggtagcgca
     2161 gccgaccctc gatccgctcg atctcctccc gcacccgcgc cagctcgcgc tccaccgaca
     2221 gcacgtcctg cagcttgccg gtgcgggtac ggagcagctc caccagccgc tcctccagcc
     2281 ggcgcccgtt ggcggcgcgg gcggtcaggt ccacgaactc ctcgctcaca tcgtccgcgc
     2341 tcacgttgac gaactccagc cgtccgatcg gctgcaggcc ctcggtcagc tcgtcgaacc
     2401 gtgccgcggg caccttcagc tccagcgtcg catgccggac ctgattgcgc ccgctttgca
     2461 ccgaggcgtc ggccacgaag ccgccggccc gctgggcgac ctgccgcagc cgcaccatgg
     2521 cggcttcgag cgagtcgacc tcgatgctcg cctggccggt cctgacgatg aggcggtcca
     2581 tgggatcggt cgtggtgggc cggaaccact gctcctcggc ggccggctcc gccgcgcccg
     2641 gggcttccgt gcgctcgccg acggcgccga tcgcgatggc atcggcggac tgcttcgcgc
     2701 tgcccggggc gttcgcggcg gcgccggtgt tgatgaccga ctcatcggat ctcgcggcgc
     2761 cctcgcacgc ggcgagcaga ccgacctgca gcagaaccag caccatcgtc cggattcgca
     2821 catcgcacct cggctcgggg agcacaggag atgcgagggg cggggaagct tgcacagtgc
     2881 agccgatggc agcggggggc tactcgtgcc gcagggcctc caccggatcc atcctggccg
     2941 cgcggttggc gggcaggagc ccgaacacca gcccgatcgc gatgctgacg ccgcacgcga
     3001 gcacgatgct ccagagggga accgccgact ccaggctcat cagcgccttc agggccatcc
     3061 ccgcgaggag gccgaaggcg ataccgagcg ctccgccgac gagcgtcagg gtcgccgcct
     3121 ccaccaggaa ctgccagagc acctcccggc gggtcgcgcc gagcgccttc ctgaggccga
     3181 tctccttggt ccggtcgctc accgagacca tcatgatcgc catcacgccg atgccgccca
     3241 ccagcagcgc cacgctggag agggccacca tcgccaggaa gaaatacgag gtgaagttcc
     3301 cgaccacgtc caggatctgg tcctgggtga tcaggtcgaa cgagttggga tcgcccggcc
     3361 gcaggtttcg cgtccggcgg agcgcgaccg tcaccgcgtc catcgccggc cccacctcga
     3421 tcccgctcct cggcttcacc gcgatgaaga gggcattggt ctcgtcgtac tggaagttct
     3481 cccgtgcggt ggcgaacggt accacccctc cggtcgcctg tccggggggc tcgaagatgt
     3541 tggagggctt ctcgaagatc ccgatgaccc ggaaggagac gccgcccacc ctgacctgct
     3601 tgcccatcgg atcgagccgg ccgaagagtc ggtccgcggc cgcgctctcc aggacgatca
     3661 ccggctcgcc ggccagctcc gcccggctga agaagcggcc gcgcagcagt gttcccccct
     3721 ggatgtccat gtaccggtcg tccgccccga agacgatcac ctgctgggtg cgcaccccct
     3781 ggtactcgat cttctggaac acctgcaccc agatcccggc gtagcgcacc tcgggcagcc
     3841 gccggatcgc ctccgcgtcg ccacgttgca gcaccggccg gatccggacc tcgtacggca
     3901 ggcggtcggg attgagcggc gtctgggaga agtagcggat gacgtagaag gtggtcgggc
     3961 ccgccacctc gatggcgttg aagatctgcc ggcggatccc ctggaccagc gaggcgacgg
     4021 ccatcaccgt cgtcacgccg atcacgacgc cgagaatggt gagcgcggac cgcagcttgt
     4081 tggcgcggat cgagtccagc gcgatcgccg cgccctcacc gacgcttcgg aggagcacgg
     4141 ctcactccat cctgagcgcg gtgatgggat cgagccgcga ggcccgggta gcgggataaa
     4201 cgccgaagat cgtgccggcc gcggttccca ccagcagcgc gagcaggacc gaccagagcg
     4261 tgatccgcgc cgggagcggc gtgaaggtgg agacgccgaa ggccagcacc cagccgctga
     4321 gcaccccgag cgcgcccccg gtactcgtca gcaccagcgc ctccaccagg aactgccgcc
     4381 ggatgtcggc gcgggtggca cccagggact tgcggaggcc gatctcgcgg gtgcgctcgt
     4441 tcaccgtcat cagcatgatg ttcatgatga cgatcccgcc gaccacgata ccgatcgcca
     4501 ccaccgccgg tatcgcggtg aagagcaggc tggtgagctg cttccagaac gcgatcaggg
     4561 cgtcggcctt gtccaccgtg aagtcgttgt cctcccccgg ccgcagccgg tgcgcaatac
     4621 gcatcgcctc ctccgccctc gccatcccgg cctcgatcga ctccgcgtcc ggcatcttga
     4681 ccgacaccac ggtcgtcttc cgcgcgccgt aggcggcctc gaacgtgctg aagggcagga
     4741 ggacgaaggc atcgaacgac tggccgagga gccgtccctt cggcgcgatg acgcccttga
     4801 ccgtgagctc gcggccgtcg agccgcaccc gcttgccgac cgcggtgagc gggtcgtcga
     4861 acagcttgtc ggcgatctcg tgtccgaggg cgacgaccgg ccggcggccg ctcacgtcct
     4921 ggtcggtcag gggagcgccc gccagataga cgtagtcctg caccgcctgg tagggcgccg
     4981 tcacgcccag gacgccgacg ttggccaccg tgcggtcccg gtatctcatc tcgcccaccg
     5041 gcgacggcca gcccgactgg agcgcgaccg ccacggcctc cggcaccgcc gccgcgaccg
     5101 cctccgcgtc cgccacggtc accagcggcc gcttcgcgat ctcccgcacc tggtcgtcgt
     5161 ccatcaggct gaccgagatg ggtccccgcc gcacctggaa ggtgttggtc ccgatcatgg
     5221 acgccgtcag tgtgccgctc acgtaggcgt tcatcccctg gatgatggcg acgacgacga
     5281 tcaggaaggc gacggagacg aggatgccga gcagggtgaa gaacgaccgc agcttgctgg
     5341 tccagatcgc ctggacggcc aggcggaggg cctcggagag gggcatggcc gggaaaactg
     5401 ggcggaaggg ggagaaggcg gtagggcggt gggcggtaag gcggtaaggg ggtaaggcgg
     5461 taaggaagtg tgtcaccctg agcggagcga agggagccat gccagcatgg gccccttcgc
     5521 tccgctcagg gtgacaatcc cgcctaccgc cttcccgcct accgccttcc cgccttaccg
     5581 ccttcccgcc ttattcgtac ctcagcgcct ccaccgggtc cagcttcgac gccttgttcg
     5641 cgggatagag tccgaagagc accccggtca ggatcgaggc gaccaccgcc gcgatcaccg
     5701 agatgagcgg caccgaggcg ggcaccggag tgaacgagcg caccccccag gccactcccg
     5761 cccctaaggc catgccgatc aggcacccca cgagcgtgag ggtcgccgcc tccaccagga
     5821 actggaacat gatctcgccc cgggtggcgc ccagcgcctt gcggacgccg atctcgcggg
     5881 tgcgctcggt caccgagatc atcatgatcg ccaccactcc cacgccgccc accatgagcc
     5941 ccacactgga gagcgcgatc atggcgacga agaaccctgc cgtgatcttg ttgaacgcat
     6001 ccagcacgcg gtcggaggtg accagcgcga agttgttctc ctccgccggc cggagccccc
     6061 gccggctccg gagcgccgcc gtcacctggt cctgcgcctc cgccacggtg gcggcctcgg
     6121 tcgggatcac ggccacctcc atccagccgg gccagtactc ggtcaccttc cggaaggtgg
     6181 tgtgcgggat cgcgagacgg ggctcgtccg cgttggtgaa cagcgacgcc gcctcggcgt
     6241 gcatgcccac cacctcgaac ggcacaccgt agatcttgat ctgcttgccg atggggtcga
     6301 gcccggggaa cagagactcg gcgagcttgt cgttgatcac cgcgaccctg gaaccggcgg
     6361 cgtactcgat ggcggtgaag ttgcgcccgg cgagaatgtc gcccccgttc acctgcggcc
     6421 aggtccagct gaagccggcg atcttgacgt cgctcaggtc ggtgccgccg ccgttcaccg
     6481 gaccctcggt gtactcgccc aggttcacgt cccgcaccgc ggggagggac cggatcaggt
     6541 cggcctcttc caccgtgacc tcgggcatcc ggcgccacgg cgagagctcg tccgagccgt
     6601 ccgagatctc caggcccccg gagaagtagc gcaccaccac gaacgtcttc gggccggccg
     6661 actcgaggat gccggtgatg ctccggttga tcccggtgat cgcggaaccc atggcgatca
     6721 ccaccatgac gccgatggcc acgcccagca ccgtgagcgc cgcccgaacc ttgttcgagc
     6781 ggagggagtc gagcgcgatc ccggcgccct ccaccatccg gaacagcagg gtgaccgctt
     6841 tgggggcgct cattccgccc tcagagcgac gatggggtcc agccgcgagg cccggctggc
     6901 cggatagacg cccgccacga tcccgacggt cacccccagc accacgccga gcgcgaccga
     6961 ccacggggcc accgcggcgg gcaggggcgt gagcgccttc accacgaacg cgagcaggag
     7021 ccccaggccg atccccatca ccgctccggc cgcggacagg gtggccgact ccaccacgaa
     7081 ctgggccagg atgtcacgcc gccgtgcgcc gagcgccttc cgaatgccga tctcccgggt
     7141 gcgctcgctc accgccatga gcatgatgtt catgatcacg atgccgccga ccacgaggga
     7201 gatcgcgacc aggcctggca gggcgaggaa caggatccgg gagatccggt cccaggtccc
     7261 cagcgcgccc tccgcggtct ggaagtggaa gttgttatcc tggtccggct tcagctgtcg
     7321 ccggctgcgc atcgccgcct ccgcctgacc catggcgagc tgcatctgga ccgggtcgtc
     7381 cgtctgcacg atcagcgcgt ccaggatgtt gatgggacag atcaggcgcc ggcccggcgc
     7441 gttgaacggc atcaccgcga acttgtccag cgagaggccg aatagggtgc cctggggcgc
     7501 caccacgccg atgatccggt aggggagccc gccgatccgc acctccttgc cgatcgggtc
     7561 cacgccgggc aggagccgcc gggccacctc atcgccgatc accagcaccg gcagggccgc
     7621 gcggacctcc tgggcggtga aggcccggcc cgccaccacc tcgtagttcc ggatcccgaa
     7681 gtagctctcc tcggtgccga tgaggtccac gtccttggcc accttgccgt cgtagtgcac
     7741 cgacacccgg tcctggcaga acttggcgaa agtggccggg atgccgatgc gatcccgcac
     7801 gaagtcggcg tcgtcgtagc tcacccgtgg gcggcggagc cactccatcc acatctcgcg
     7861 ggtggtgtgg cccatgttga tgctgggccg ctgccggagc tcgaaggtgt tcgcgccgac
     7921 cagggtgttg gcgaaccggt ccaccatgta gcggttcatc ccctggacga tcgagaccac
     7981 cgcgatgagg aaggtgacgc cgatgagcac gccgaccagc gagaagaagc tcttgagctt
     8041 ctggctgcgg atggtgcgga gcgccaggcg gatggcttcg aagacgggca tgagcttgga
     8101 ttccccgtgt caggccgacg cccggatcac gcggcggctt cccggctgac atgatccgac
     8161 tcgacccgcc cgtcccgcag gatgatgcga cgctccgacc gtgcggcgat gtccggctcg
     8221 tgggtcacca tgatcacggt ctgtcccgcc gcatgaagcg ccgcgaacac ctccatgatc
     8281 tcgtcgctgg tgacgctgtc gagattgccg gtgggctcgt cggcgagcag aatgctgggc
     8341 tcgttcacca gcgccctggc gatcgcaacc cgctgccgct gtccgccgga gagctcgttg
     8401 ggccggtggt ccatccgctc ccccaggccc acgcggtgca gcgccgcggc cgcgcgctgg
     8461 cgccgctcgc gcgcgcgcac tcccgcatac accagcggca gctcgacgtt gtgcagcgcg
     8521 gtcgcccgcg ggagcaggtt gaaggtctgg aacacgaatc cgatctcgcg attgcggacc
     8581 cgggcgaggg cgtcgtcggt caggcgggag acctcctcgc cgttgagcca gtactccccc
     8641 gcgctcggag tgtcgaggca gccgagcacg ttcatcatgg tggacttgcc cgagcccgag
     8701 gggcccatga tggcgacgta ctcgttccgg tggatctcga gcgtcacccc gcgcaaggcg
     8761 aggatccgct ccgaccccat gcggtactcc cgcgccagat cgcgaatccg gatgatcgcg
     8821 gtcacgtggc cgcctgctgc cggtcggccg gcgcctcggt ggtgtcctct gccacccgaa
     8881 ccttgtcgcc gtccttgagg tcgcggatgg cctgataggt cccggccacg atggtctcgc
     8941 cgccgcggag gccgtcgagc acctcgaaat actcgtcgcc cgcgatgccc accttcaccg
     9001 ggcggaaggt cgccacgccg ttctgcacca ggaacacgcc ctcctcctcg cgctcccccg
     9061 gccgccggcg ggacacggtg tccagcgccg ggttgttctc gttgggcacc cgctcgtggt
     9121 cccgcacggt cagcgcgatg atcggaatgc tgagggcgcc ctcccgggtg tcggtgatga
     9181 tgcgggcggt gcagctcagg tccggccgga tgtccccggg cggggtgtcc agccggatct
     9241 ccacgtcgaa gtccacggcg cggtcgttgg agccggacgc ggtctgggtg ttggtcagct
     9301 tggcgctctg gctcacccgg atcacccggc ccatgaaggc ggaatcgggg taggcgtcga
     9361 tggtcacctc gaccgagtcg ttgtgcgaca ggcggacgac gtcggtctcg tccacctgca
     9421 ccttggccag gatgaccgag aggtccgcga tggtgagcag caggccggtc tcccgggaga
     9481 aggtgcccgg cactgccacc tcgccctcct ccaccgcgag gcgtaccacc cgccccgcga
     9541 tgggcgacat caggcgggtc ttggccaggt tgtccttcgc ctcctgaagg ctcgcccggg
     9601 actggtccag ctgcgcccgc gtggcctgat aggtggcttc ggcgacatcg agcgcggtgc
     9661 gggcctcctc cgcctgagcg ggggcgatga ggttggggcc caggcggctg agctggtcgg
     9721 cgcgcttcca ggcacgctcc gcctgatccc ggttggcccg gacctggagc agggtggcct
     9781 gggtcgagga gaccacccct tccgcccggg acaccgccgc ctggtactgg gccggatcga
     9841 tctggagcag gaactggccc ttgcgcaccc gatcgccctc ctccacggcg atgtcgatga
     9901 tgcggcccgt gatatcggcg gagatgtcca ccgaggtctg cggctcgatc ttgccgctcg
     9961 cggtgacggc actgaccagg tcgcggcggg cgacctgctc catgcggacc tcggttccgg
    10021 cgttcttctt cttgttcagg ctgtaggcga tcccgccgcc gcccgccagc gccagcaccc
    10081 cgatgatcag ccccaccttc atcccacgcg acatgtgcgt tcctcgttag cgaaggggtc
    10141 gcccgacggc cgcttccagc gcggcgacgg ccttgtggta atcgtagacc gcgttcacgt
    10201 agtcgccctc ggcccgctgc accgcgttct gggcgtcgga gacctccaac gacgtgcccg
    10261 cgcccaggcg gtagcgatcc tgcgccagcc
//
LOCUS       DASUYN010000058         2914 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1119238, whole genome shotgun sequence.
ACCESSION   DASUYN010000058 DASUYN010000000
VERSION     DASUYN010000058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2914)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2914)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2914
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1119238"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..666
                     /locus_tag="VF061_01160"
     CDS             <1..666
                     /locus_tag="VF061_01160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668132.1"
                     /translation="MHVLDDLLEVQPNDVYGTLFRGSSRVLQGAKRAAGAADLDRAIT
                     LASASPDVRFIIADAYTYGYLPDAQRAFDEATFALAGGLDTPRIRAILAGAYLAFDDT
                     AAAAEQIGLHLDAVTTELVAAAPLGTGSSTSLGVVPGRTYEIPLPAAAGQPISIATSS
                     KDFWDTILLLLAPDGTRILGSDDFKGYLAGFAWVAPTAGTYRLRVTSFEAVSTGDLVV
                     ARK"
     gene            704..1231
                     /locus_tag="VF061_01165"
     CDS             704..1231
                     /locus_tag="VF061_01165"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEX6668133.1"
                     /translation="MRLIDPLIAELEQEAETTRRVLERIPEASLSWRPHPKSMSLGQL
                     ALHIATTPGGVAQVAAQDSMERPRFDRPEPKSRREVLEALEQSLATAVEFLRGLDDVR
                     ATQTWAMTLAGKPIFSLPRIGLIRTIMLNHWYHHRGEMQVYLRLLDVPVPPVYGPTAD
                     EDPFVASGSEILQTT"
     gene            complement(1279..1824)
                     /locus_tag="VF061_01170"
     CDS             complement(1279..1824)
                     /locus_tag="VF061_01170"
                     /inference="COORDINATES: protein motif:HMM:NF025432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4256 domain-containing protein"
                     /protein_id="HEX6668134.1"
                     /translation="MTAKQREELLRALKARFEKNMNRHAGLEWARVEAKLEAIPDKLR
                     SLHEMEETGGEPDVVAHERGTGEYTFYDCSVESPKGRRSICYDGEAQRSRKEHPPKNN
                     AIEMAAAMGIELLTEQQYRELQKLGAFDTKTSSWVKTPSDIRRLGGALFCDRRYDTVF
                     VYHNGAESYYAARGFRGLLRV"
     gene            complement(1828..2040)
                     /locus_tag="VF061_01175"
     CDS             complement(1828..2040)
                     /locus_tag="VF061_01175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668135.1"
                     /translation="MAEINDCVPGRQARVLRAGVARVVGRTGTIVEVSRIRRPPSGPL
                     QDRVTVDVPGHGEISVNPGDVELVQE"
     gene            complement(2100..2801)
                     /locus_tag="VF061_01180"
     CDS             complement(2100..2801)
                     /locus_tag="VF061_01180"
                     /inference="COORDINATES: protein motif:HMM:NF014068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019172 - glyoxalase III activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase
                     domain-containing protein"
                     /protein_id="HEX6668136.1"
                     /translation="MPRILMVLTSHDRLGDTGRKTGFWLEEFAAPYYVLRDAGAEITL
                     ASPKGGQPPVDPKSDEPGAETAAMKRFRSDADAQRALANTVKLSTVSADDFDAVFYPG
                     GHGPLWDLAEDRSSIGLIERFYGTGKPVGAVCHGPAVLRRAKAPDGTPLVKGKRVTGF
                     ANSEEEAVGLTNVVPFLVEDELKAAGGRYSKGADWASHTAVDGNLVTGQNPASSEATA
                     KALLEALAAKAGGVA"
BASE COUNT          446 a         1030 c          927 g          511 t
ORIGIN      
        1 atgcacgtgc tcgacgatct gctcgaggtg caaccgaacg acgtctacgg caccctcttc
       61 cgcggctcga gccgggtgct ccagggcgcc aagcgcgcgg cgggcgcggc cgacctcgac
      121 cgcgcgatca cgctggcctc cgcgagcccc gacgtccggt tcatcatcgc cgacgcgtac
      181 acctacggct atcttccgga tgcccagcgc gccttcgacg aggcgacctt tgcgctcgcg
      241 gggggactcg ataccccgcg gatccgggcg atcctcgcgg gcgcgtacct ggccttcgac
      301 gatacggccg cggcggccga gcagatcggg cttcacctcg acgccgtgac caccgagctc
      361 gtcgccgccg cgccgctcgg gaccggcagc tcgaccagcc tcggggtcgt gcccggtcgc
      421 acctacgaga ttccgctccc ggccgccgcc ggccagccca tctcgatcgc gacgagcagc
      481 aaggacttct gggacacgat cctgctcctg ctcgcgcccg acggcacccg gatcctgggc
      541 agcgacgact tcaagggcta cctggccggg ttcgcatggg tcgcgccgac agccgggacg
      601 tatcgcctgc gggtcacgtc gttcgaggca gtgagcactg gggacctggt ggtggcgcgc
      661 aagtgagccg cgcctcctgt caccctctca tcgagagaca acgatgcgcc tgatagatcc
      721 cctcatcgcg gagctggagc aggaggccga gaccacgcgg cgggtgctgg agcggattcc
      781 cgaagccagc ctgagctggc gtccgcaccc caagtccatg tcgctggggc aactcgccct
      841 gcacatcgcc accacaccgg gtggcgtggc ccaggtcgct gcgcaggact cgatggaaag
      901 accccggttc gaccgacccg agccgaagag caggcgggag gtcctcgaag ctctggagca
      961 gtcgttggcc acggcggtgg aattcctccg cgggctggac gacgtccggg ctacccagac
     1021 ctgggccatg accctggcgg gcaagccgat cttttcgctg ccgcggatcg gcctgatccg
     1081 gaccatcatg ctcaaccact ggtaccacca ccggggcgag atgcaggtgt atctccggct
     1141 gctggatgtg ccggtaccgc cggtgtacgg gcctaccgcg gacgaggacc cgttcgtcgc
     1201 gtcgggatcg gagatactcc agacaacctg agtcccggac ctcgctccgg cgaccacagc
     1261 catcctggcg cggtgaccct agacccttag caagccccgg aacccccggg cggcatagta
     1321 ggactctgca ccattgtgat acacgaagac cgtgtcgtag cggcgatcac agaagagggc
     1381 gccgccgagt cttctgatat ccgacggtgt cttcacccag ctcgacgttt tcgtatcgaa
     1441 cgctcccagc ttctgcagct cccggtattg ctgctccgtc aggagctcga tgcccatggc
     1501 agccgccatc tcgatggcgt tgttcttcgg cggatgctcc ttcctcgacc gctgggcttc
     1561 accatcgtag cagatgctcc tgcgaccttt ggggctttcc accgaacagt cgtaaaaggt
     1621 gtattcgccc gtccctctct catgagcgac gacatccggc tccccgccgg tttcttccat
     1681 ttcgtggagc gatcgcagtt tgtcgggaat ggcttcgagc ttcgcctcta ctcgagccca
     1741 ttccaggccc gcatggcggt tcatgttctt ctcgaagcga gccttcagcg ccctgaggag
     1801 ctcttcacgc tgcttggctg tcatgttcta ctcctgcacc agctcgacgt cgcccgggtt
     1861 gacgctgatc tctccgtggc caggtacgtc caccgtgacc cgatcctgga gcggcccgct
     1921 gggcgggcgg cgaatccggg aaacctccac aatggtgccc gtcctgccca cgacccgggc
     1981 gacgcccgcc cgcaacactc gggcttggcg cccgggcacg cagtcattga tttcggccat
     2041 tggaagctcc tttgctccag ccactgtacg gacggcgatc gatcgccacg gtgctccgcc
     2101 tatgcgaccc caccagcctt ggcggccagc gcctcgagca gggctttcgc ggtcgcttcg
     2161 gaggatgccg ggttctgccc ggtcacgagg tttccgtcca cggccgtgtg gctggcccaa
     2221 tccgcgccct tcgagtaccg gccccctgcg gccttgagct catcctcgac caggaacggc
     2281 accacgttgg tgaggccgac ggcttcctcc tcgctgttcg cgaacccggt cacgcgtttg
     2341 cccttcacca gcggcgttcc gtcgggcgcc ttggcgcggc gaagcaccgc ggggccgtga
     2401 cagaccgcgc cgaccggctt ccccgtcccg tagaaccgct cgatcagccc gatggagctc
     2461 cggtcctcgg ccagatccca gagcggcccg tggcccccgg ggtagaagac cgcatcgaag
     2521 tcgtcggccg acacggtgga aagcttcacg gtattggcga gcgcccgctg cgcgtcggca
     2581 tcgctccgga accgcttcat cgcggcggtc tcggcaccgg gctcatcgct cttgggatcg
     2641 acgggaggct ggccgccctt cggcgaggcc agcgtgatct cggccccggc gtcgcgcagc
     2701 acgtagtatg gcgcggcgaa ttcctccagc cagaagccgg tcttccggcc ggtgtcgccg
     2761 aggcggtcgt gggaggtgag aaccatcagg atcctgggca ttgctcgact ccgctgcaaa
     2821 gggtttagga ggtccgcgga gccgacggct gtgcgacaag ctcgcgcacc ttctccagaa
     2881 gttgatcggg tgtaaacggc tctcgtaaag gtgg
//
LOCUS       DASUYN010000059         3010 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_899318, whole genome shotgun sequence.
ACCESSION   DASUYN010000059 DASUYN010000000
VERSION     DASUYN010000059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3010)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3010)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3010
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_899318"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(58..612)
                     /locus_tag="VF061_01185"
     CDS             complement(58..612)
                     /locus_tag="VF061_01185"
                     /inference="COORDINATES: protein motif:HMM:NF018213.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative glycolipid-binding domain-containing
                     protein"
                     /protein_id="HEX6668137.1"
                     /translation="MSGVHTAIWRRLDRPGHEAARLVHHAPFWQLGGTAVFLLDQPCR
                     LEYQIVCDAAWRTLHGRVSGWYGAEQVKVELYTDTARRWTINGHAATSVAGCVDLDLA
                     FSPATNLIPVRRLALNQGERAEVRSAWLAFPEMTLEPLVQTYARTGESTYHYESSAGA
                     FVTDLEVDAAGFIVRYPPLWEAVR"
     gene            773..997
                     /locus_tag="VF061_01190"
     CDS             773..997
                     /locus_tag="VF061_01190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668138.1"
                     /translation="MTSLLQACWAAAVTLALYAFYCYWEAGRADLAHGFRHLASGQPG
                     PGAGAGYRARAWWAAAGALLLALGCLASAL"
     gene            complement(1009..1530)
                     /locus_tag="VF061_01195"
     CDS             complement(1009..1530)
                     /locus_tag="VF061_01195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668139.1"
                     /translation="MTLVRWIGVAVAVPLIHGCTSAPGVAEGGAARRAAAASDSGFAA
                     VQDRGRRAMGVDQYTSSHRFQPLPDGGRIELQRDEADSGGRAQILSHMALIADAFAAG
                     DFRLPGFVQARAVPGTQVMTARRGEISYVVESLPRGGALRLRTADSSAVRAIHQFLAF
                     QRTDHRAGLHHGD"
     gene            complement(1527..1769)
                     /locus_tag="VF061_01200"
     CDS             complement(1527..1769)
                     /locus_tag="VF061_01200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668140.1"
                     /translation="MSDAMRCERCGDREAEVFLSHRREDGLHSVALCGVCARRDQGLV
                     LGALIQAQTPGALPLTEEQEEAVRRAIDRVGGEPSA"
     gene            complement(1766..2254)
                     /locus_tag="VF061_01205"
     CDS             complement(1766..2254)
                     /locus_tag="VF061_01205"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEX6668141.1"
                     /translation="MTSAAVALLAEAIQPRSGRRAWHGGPTPLGALRGVTAEQAAWRP
                     GPKRKSVWALALHVAYWDYAVRRLLDGSARGGFPRAPSNWPAPPVRPDPRVWSSDVAL
                     LRGEHDRLVEAVLRVDPGRLDRRPPGSKQWTYGELLVGIAMHDAYHTGQIQLLKRLWQ
                     DR"
     gene            2337..2744
                     /locus_tag="VF061_01210"
     CDS             2337..2744
                     /locus_tag="VF061_01210"
                     /inference="COORDINATES: protein motif:HMM:NF017935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF983 domain-containing protein"
                     /protein_id="HEX6668142.1"
                     /translation="MWRFLRRTGLLFRRALGLRCPNCGGGPILEGWLRMRTHCPRCGL
                     PMERGEHGYQVGSYMFAIIAAELIFAAIFLGTVLLTWPDPPWDLLLYGGMALMLVVPF
                     LFFPFSKTLFLAFDLTFRPARPEELAPGRPPGA"
     gene            complement(2741..>3010)
                     /locus_tag="VF061_01215"
     CDS             complement(2741..>3010)
                     /locus_tag="VF061_01215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668143.1"
                     /translation="AAVADESGRSYTASDGRTWTFHRRPEVRQAELGTHVTLLVESLG
                     EVRVVSCRHADWESAEPDLRALLARSVPLGGSRGVGGDGSRAGEA"
BASE COUNT          403 a         1128 c         1027 g          452 t
ORIGIN      
        1 gggcgctaca gcgtgatcgc cgacaccatc cgtttccacg acgacgatgg cgacgactta
       61 ccgcaccgcc tcccacagcg gggggtaccg cacgatgaag cccgcggcgt ccacctccag
      121 gtcggtgacg aaggcgccgg ccgaggactc gtaatggtag gtggactccc ccgtgcgtgc
      181 gtaggtctgc accaggggct cgagcgtcat ctcgggaaag gcgagccacg ccgagcggac
      241 ttccgcgcgc tccccctggt tcagggcgag gcggcggacc gggatcaggt tggtggcggg
      301 ggagaacgcg aggtcgagat ccacgcagcc cgcgaccgag gtcgcggcgt gcccgttgat
      361 ggtccagcgc cgggcggtgt cggtgtacag ctccaccttc acctgctcgg cgccgtacca
      421 gccggacacc ctgccatgga gagttcgcca ggccgcgtcg cagacgatct ggtattcgag
      481 ccggcagggc tgatccagga ggaacaccgc ggtgcccccc agctgccaga acggggcgtg
      541 atgcaccagg cgggcggcct cgtgccccgg ccggtcgagc cggcgccaga tggccgtatg
      601 aacgccgctc accgttccat gctccctggt tgcggtctgg cccgtgtcat gcaggaaatg
      661 accgactcgc ccgattccgg cccggaaggg gcgtcccggt gtggcggttt gcactgcttc
      721 cgcccacgat gcgtcctccc ggcatgacca cgcgatcgaa acggatggtc agatgacctc
      781 gctcctgcaa gcctgttggg ccgctgccgt caccttggct ctctacgcct tctactgcta
      841 ctgggaggcg ggccgggccg acctcgccca cgggttccgg cacctcgcct ccgggcaacc
      901 gggtcccggg gcgggcgccg gctatcgcgc ccgggcctgg tgggccgccg cgggcgccct
      961 gctgctcgca ctcggctgtc tcgcctcggc gctctgaggg cgcgcgagtc agtcaccgtg
     1021 gtgcaggccc gcccggtgat ccgtccgctg gaaggccagg aactggtgga tcgcccgcac
     1081 ggctgagctg tccgccgtcc gcaaccggag cgctcctcct ctcggtaggc tctccaccac
     1141 atagctgatc tcgccccgcc tggccgtcat cacctgcgtc cccggtaccg cccgggcctg
     1201 cacgaaaccg ggaagccgga agtcacccgc ggcaaaggcg tccgcgatca gggccatgtg
     1261 cgacaggatc tgcgcccgcc ctccgctgtc ggcctcgtcc cgctggagct cgatcctgcc
     1321 gccgtcgggc agcggctgga accggtggct ggaggtgtac tgatccacgc ccattgcgcg
     1381 acggccgcga tcctgcaccg ccgcgaaccc gctgtcggag gcggcggcgg cgcggcgagc
     1441 tgccccaccc tccgccaccc cgggcgccga ggtgcagccg tggatcagcg gcacggccac
     1501 cgccacaccg atccaacgga cgagagtcat gccgacggtt ccccgcccac gcgatcgatc
     1561 gcccggcgca cggcctcctc ctgctcctcg gtcagcggga gagcgccggg cgtctgcgcc
     1621 tggatgagcg cgcccagcac cagcccctgg tctcggcgcg cgcagactcc gcagagcgcc
     1681 accgaatgca gcccgtcctc gcgccggtgg ctgaggaaca cctccgcctc gcggtccccg
     1741 cagcgctcgc agcgcatcgc gtcgctcacc gatcctgcca gaggcgcttg agcagctgga
     1801 tctgtcccgt gtgataggca tcgtgcatgg cgatgccgac caggagctcg ccgtaggtcc
     1861 attgctttga gccgggtggt ctccggtcga gccggccggg atccactcgg agcacggcct
     1921 ccaccagccg gtcgtgttcg ccccgcagca gcgccacatc ggaggaccag acccgcgggt
     1981 cgggacgtac cgggggcgcc ggccagttgg acggggcccg ggggaagcca cccctggcgc
     2041 tgccgtcgag caggcggcgc acggcataat cccagtaggc cacgtgcagc gcgagggccc
     2101 agacgctctt gcgcttcggc cccgggcgcc aggcggcctg ttccgccgtc accccacgca
     2161 gcgcgcccag cggcgtgggc ccaccgtgcc acgcccgccg ccccgatctc ggctggatcg
     2221 cctccgcgag cagcgcaacc gccgcactgg tcaacccggg ttcctccgat tctgcgcccg
     2281 gtagagcata cgccgggacg ccgaaaggcg gaatgccacc ggctatctta cgtcgcatgt
     2341 ggcgctttct gcggaggacg ggactgctgt tccggcgtgc gctcgggctg cggtgcccga
     2401 attgcggtgg gggaccgatc ttggaggggt ggttgcggat gcggacccac tgcccccggt
     2461 gcggcctccc catggagcgt ggggagcatg gctaccaggt cggctcctac atgttcgcga
     2521 tcatcgcggc ggagctgatc ttcgccgcca tcttcctcgg caccgtcctg ctcacctggc
     2581 ccgatccgcc gtgggacctg ctcctgtacg ggggcatggc gctgatgctc gtggtgccgt
     2641 tcctgttctt ccccttctcg aagaccctgt tcctggcctt cgacctgacc ttccggcccg
     2701 ccaggccgga ggagcttgcc cccgggcgac ctcccggcgc ctaggcctcc ccggcccggc
     2761 ttccatcgcc acccacgccg cgggatccgc caagcgggac cgagcgcgcg agcagggcgc
     2821 ggagatccgg ctccgcgctt tcccagtccg cgtggcggca ggagacgacc cgcacctcgc
     2881 cgagactctc caccagcagg gtgacgtggg tccccagctc cgcctgacgc acttcgggcc
     2941 ggcggtggaa ggtccaggtt cgcccgtcgg aggcggtgta ggaccgcccg ctctcgtcgg
     3001 ccaccgccgc
//
LOCUS       DASUYN010000060         8402 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_17514, whole genome shotgun sequence.
ACCESSION   DASUYN010000060 DASUYN010000000
VERSION     DASUYN010000060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8402)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8402)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8402
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17514"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..628)
                     /locus_tag="VF061_01220"
     CDS             complement(<1..628)
                     /locus_tag="VF061_01220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668144.1"
                     /translation="MRAIRIVPVALGLGVLALASSCSRMSAPTDTSRPAGAELASVEG
                     DPVVVAVGDIVCGTGTSTSAPCVHAQTAALTGAVAPAAVLLLGDNQYESGTLSDFRSF
                     YDPTWGTHKAITWPSAGNHEYQTAGAAGYFDYFNGQGAPTGRAGDRTKGYYSFDLGSW
                     HLIALNSNCAAVGGCGAGSPQEQWLRTDLAANPRTCTLAYWHHPRFSSG"
     gene            772..1254
                     /locus_tag="VF061_01225"
     CDS             772..1254
                     /locus_tag="VF061_01225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668145.1"
                     /translation="MLRLPRLSGVVATCLTLSLPSPAGGQTSGFPDISARQYTGGEIL
                     VSVTGSATIEQEIPLNVPASISDGEVTWLQFGASGSPEPHALITYGQTKEIGISVGRG
                     KWITTGGIIPGEKSECSGKVQVTATEITGEYTCAGVVSHDPEDGMGKVDITVRFTAKS
                     "
     gene            1367..2143
                     /locus_tag="VF061_01230"
     CDS             1367..2143
                     /locus_tag="VF061_01230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668146.1"
                     /translation="MIPVIPWYITAIILAVNVTIAGALWRIVATAARRSDLPPAAERK
                     VRSGSAIFLFGWLGAALLLAPAPASLAGGDPFYLTPLIPLFALGATAVVLAAIRLSPA
                     LRRTLGAVSLPAVHGVQFYRVIGATFLVLLALGQVPAHFALPAGWGDVAMGLTAPLVA
                     LALVRRAAGSRALAAGWNVFGLLDLVVAVGMGTGYLAPVLAPQLGAHVPPAAAMGVFP
                     LILVPTFAVPVSVMLHLLGLIRLAGEARTRVSWQPVLRDS"
     gene            complement(2130..3290)
                     /locus_tag="VF061_01235"
     CDS             complement(2130..3290)
                     /locus_tag="VF061_01235"
                     /inference="COORDINATES: protein motif:HMM:NF019403.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heparan-alpha-glucosaminide N-acetyltransferase
                     domain-containing protein"
                     /protein_id="HEX6668147.1"
                     /translation="MPASPRVRGLDLMRGVVIVLMVIDHARWFLSSARFDPTDPAQTT
                     VALFFTRWVTHFCAPVFMLLAGAGAYLSLGRGRTRSALSWFLLTRGLWLLLLEVTVAR
                     FGWQFNLDYGYTSALVFWALGWSMIALAALVRLPLPWIAGLGLLMIAGHNLLDGVEAG
                     DGGSLSWLWIILHQPGTLTLGTDVEFFVLYPLLPWIGVMAAGYAFGRLSTLEPVQRDR
                     IYLGLGAALTAGFVLLRLGNWYGDPSPWTSQQTWWRTALSFLGTTKYPASLLFLLMTL
                     GPAIAALPWLERMRGPVAEMLLTIGRVPLFFWLLHVPLIHLVAVGLSLARYGQVVPWL
                     YRNPPTPLPEGYGHGLAVVYAVTFAVVAVLYPLCRWFAGVKRRRRDPWLSYL"
     gene            3289..4329
                     /locus_tag="VF061_01240"
     CDS             3289..4329
                     /locus_tag="VF061_01240"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEX6668148.1"
                     /translation="MAMSDKMRTAPGARFQNRAPGPTFRPMFTGEAVAVYDWHCPGCD
                     APGHGEEYNDSYEVVVVRRGAFVREVNESPAFISAGTLMFASAGEVHRISHPVPGGDA
                     CSVFRGSLPTLREIMDLLEPGAWDRQEPRFPLRQAAIGGREYLLHRLAMRAAAAGTDA
                     VEQEESALWFLHAALAFAWGRRHGGTAPAPGLGRAARRRALEYAAGAEDVVRRGYAAR
                     LTLVEIGRAVGCSPFHLSRMVRAVTGLSIHRILLRYRLRHALELILDSRAGLSAVAFA
                     TGFSSHAHLTDAFRREFGCSPDRVRRRSPAQIRALLHATREVHEEGRHAGAHHPHSDA
                     RGEGRRQGSALL"
     gene            4259..4639
                     /locus_tag="VF061_01245"
     CDS             4259..4639
                     /locus_tag="VF061_01245"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX6668149.1"
                     /translation="MLEHITPIPMLAVKDVARARRFYKDTLGLHEDRDGMEGILQFRA
                     GDTAFVVYPSEYAGTNQATALTWVVGDRLEKVIEALKAKGVAFERYELPDTVRKGEIH
                     ESGPVRNAWFKDPDGNIHALSSVG"
     gene            complement(4656..6068)
                     /locus_tag="VF061_01250"
     CDS             complement(4656..6068)
                     /locus_tag="VF061_01250"
                     /inference="COORDINATES: protein motif:HMM:NF022664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3011 domain-containing protein"
                     /protein_id="HEX6668150.1"
                     /translation="MKALLLMVSASLWLPALPLAAQATPSRVIECGTDSRQRVLCAAG
                     GEVASARLVQDLSSNRCGAAGSWGWTGNTVWVDNSCRGRFEVRYRGAADTAATRRITC
                     GTLTTRRDQCSTLGVADSVRLVKQTMFARCTEGTNWGYSDSLLWAGNGCRAEFEVVYR
                     RAAVTPPSPAKPVTRTITCGKTSGELHTCTTDGPVDTVRLVRDLSTTACRQKFNWDYA
                     RGFVWAKSGCRGMFEVTYEDTTSAGPSPETRRIICGSYSGTQVTCRTDGYATDVRLVQ
                     DLTSTRCREGSNWGHTDSSIWASKGCRGEFEVTYRGATATPTTPTGTRRVTCGSGSAI
                     QVRCGTGGTAARVRLVRNLGTKACREGDNWRYNSTTIMAGNGCRAEFEVTFGRDTTQQ
                     MKPVAPATPARTITCGNTSGSAMSCNAFGTVATIRLQRDRSGGRCAQSSSWGLNDQSI
                     WVAKGCYGDFELTYATGTLK"
     gene            6175..6441
                     /locus_tag="VF061_01255"
     CDS             6175..6441
                     /locus_tag="VF061_01255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668151.1"
                     /translation="MLDERTNWPGLYASAVLLGAGFGLFLSLGMLPSAPDWPSEWGVE
                     PTNRMLTIVVPVVGGALVGLVLAAAAHIGVRYQLRRRSSRGLRA"
     gene            6438..7127
                     /locus_tag="VF061_01260"
     CDS             6438..7127
                     /locus_tag="VF061_01260"
                     /inference="COORDINATES: protein motif:HMM:NF025691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4389 domain-containing protein"
                     /protein_id="HEX6668152.1"
                     /translation="MTTADGRPAGGYPAALEIDYPDRELNRLTTFFRPIVFIPIGILL
                     ALLSGPTSLGGPPREPGSSDPVVMLTLGAGGILSLPTALMLVFRRKYPRWWFDWNLEL
                     SGFTTRCLVYLALLRDEYPSTEEEQSVHLDLWYPDAATELNRWLPLVKWFLAIPHYIV
                     LAFLWVAAALCVLVAWVAILFTGRYPRGLFDFVTGVFRWTLRVWAYAFLLTTDRYPPF
                     SLAAEPLVGPS"
     gene            7124..>8402
                     /locus_tag="VF061_01265"
     CDS             7124..>8402
                     /locus_tag="VF061_01265"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase"
                     /protein_id="HEX6668153.1"
                     /translation="MTRFLLALALGAPPALPAQVAPAARPNIVVFVGDDLGWRDTGPY
                     GNAAVRTPSIDRLARSGLLVRYAFGTSPQCSPSRISILSGRYPHATRTEDLHMPLPPG
                     ERLLPSYLQAQGYFTGHMAKTHYGPLAERQFQWYAEETAAALPDFLDAAGGRPFFLWV
                     GFHEPHRPWDSVPPPGAHRPERAAVPPHLADTPETRTDIARYYDAIARMDRAVGEMAG
                     ELERRGLRDSTLIVFLSDNGAPFPREKGTLYDSGIRTPLIFSWPAAVRAGAVYDLGPV
                     STIDLVPTLLELAGGQVPETVQGRSFGELLTAPESYVPREYVFSERNWHDCDEHQRSV
                     RTERYKLIRTDAYTGVPLCTAADVGGSPSYLELRARARAGRLTPAQRRLFEAPRARLE
                     LYDLERDPWELTNLADHPAHAARVRELAAVLQAW"
BASE COUNT         1163 a         3028 c         2959 g         1252 t
ORIGIN      
        1 cgccggagct gaagcgcggg tggtgccagt acgccagggt gcaggtccgg gggttcgccg
       61 ccagatcggt ccgcagccac tgttcctgcg gcgaccccgc gccgcagccg ccgaccgcgg
      121 cgcagttgct gttgagggcg atcaggtgcc aggagccgag gtcgaagctg tagtagccct
      181 tggtccgatc gcccgcccgc ccggtcgggg cgccctgacc gttgaagtag tcgaagtacc
      241 ccgccgctcc cgccgtctga tactcgtgat tcccggccga gggccaggtg atcgccttgt
      301 gcgtacccca ggtcggatcg tagaaggacc tgaagtcgga cagggtcccg ctctcgtact
      361 ggttgtcgcc gagcaggagc accgcggcgg gcgcgacggc gccggtcagc gccgcggtct
      421 gcgcgtgcac gcagggcgcg ctggtcgagg tgccggtccc gcagacgatg tcgcccacgg
      481 ccacgaccac cggatccccc tccaccgacg ccagctcggc gccggccggc ctgctggtgt
      541 ccgtgggagc actcattctg gagcagctcg aggccagcgc cagcacaccg agcccgaggg
      601 cgacggggac gatccggatc gcgcgcatat gcattcgact ctggagggga gacggcaatc
      661 atatggtccg gtacgccggt ctgccagggt ggactcgatc ggctgctggc gcgcgccagt
      721 ctcgaatcgt acgttcgcag tcgcgattcc ccccctcaac ggagcattcc catgctgcgc
      781 ctgccgcgcc tctccggtgt ggtcgctacc tgtctgaccc tctcgctgcc gtcgcccgcg
      841 ggcgggcaga cgagtggatt ccccgacatc agcgcccgcc agtacaccgg cggcgaaata
      901 ctggtgtcgg tcaccggctc cgccacgatc gaacaggaga ttccgctgaa cgtgccggcg
      961 agcatcagcg acggtgaggt gacctggctg cagttcggcg cttcggggag ccccgagccg
     1021 cacgcgctca tcacctacgg ccagacgaag gagatcggga tctcggtggg caggggcaag
     1081 tggatcacca ccggcgggat catcccgggc gagaagtcgg agtgctcggg caaggtccag
     1141 gtgaccgcga ccgagatcac cggagagtac acctgcgccg gcgtggtgtc ccacgacccg
     1201 gaggacggca tgggcaaggt ggacatcacg gtgcgcttca ccgcgaagtc ctagggcggt
     1261 cgttcctgac agccttgcgc atgccgggat aaaggtgtat atacacctta tgcgccctgc
     1321 cggttgcgcc actcggcggg agcctgtcca cggaaggagc cgactcatga ttcccgtcat
     1381 tccctggtac atcaccgcca tcatcctcgc cgtcaacgtc accatcgccg gcgccctctg
     1441 gcgcatcgtg gccaccgcgg cccgccgaag cgacctgccg ccggcggccg agcggaaggt
     1501 ccgcagcggg agcgcgatct tcctcttcgg ctggctgggg gcggccctgc tgctcgcgcc
     1561 ggctcccgcc tcgctcgccg gcggcgatcc gttctatctc acgccgctga tcccgctgtt
     1621 cgcgctgggc gccaccgccg tcgtgctcgc ggccatccgg ctctcgccgg cgctgcgccg
     1681 cacgctcggc gcggtgtcgc tcccggcggt tcacggggtc cagttctatc gggtgatcgg
     1741 cgccaccttc ctcgtgctcc tggccctggg gcaggtcccg gcgcacttcg ccctgccggc
     1801 gggttgggga gatgtcgcca tgggcctcac ggcgccgctg gtcgcgctgg cgctggtgcg
     1861 ccgagccgcg ggctcgcgcg cgctcgcggc cgggtggaac gtcttcggcc tgctcgacct
     1921 ggtcgtcgcg gtggggatgg gaaccggcta tctcgccccg gtgctggcgc cgcagctcgg
     1981 tgcgcacgtg ccgccggccg ccgccatggg cgtgttcccc ctgatcctgg tgccgacgtt
     2041 cgcggtgccg gtctcggtca tgctccacct gctcgggctc atccggctgg cgggagaagc
     2101 gagaacccgg gtgtcgtggc agccggtcct cagagatagc tgagccaggg gtcccgcctc
     2161 cgccgcttca cccccgcgaa ccagcggcag agcgggtaga gcaccgccac caccgcgaag
     2221 gtgaccgcgt agaccacggc gagaccgtgg ccgtatcctt cgggcagcgg cgtcggcggg
     2281 ttccggtaga gccagggaac cacctggccg tagcgcgcca gcgaaagacc gaccgccacc
     2341 aggtggatca gggggacgtg cagcagccag aagaagagcg gcacccggcc gatcgtcagc
     2401 agcatctccg ccaccggccc gcgcatccgc tccagccacg gcagcgccgc gatcgccgga
     2461 cccagcgtca tcagcaggaa cagcagcgag gcggggtact tggtcgtgcc gaggaacgag
     2521 agcgcggtcc gccaccaggt ctgctgggag gtccagggtg acggatcgcc gtaccagttg
     2581 cccagccgaa gcagcacgaa cccggcggtc agcgccgcac cgaggccgag gtagatccgg
     2641 tcccgctgca ccggctccag ggtggagagc cggccgaagg cgtagccggc ggccatgacg
     2701 ccgatccagg gcagtagggg gtacaggacg aagaactcca cgtccgtgcc gagcgtgagc
     2761 gtcccgggct ggtggaggat gatccagagc caggagagcg atcccccgtc cccggcctcg
     2821 acgccgtcga gcaggttgtg gcccgcgatc atgagcaggc cgagccccgc gatccagggg
     2881 agcggcagcc ggaccagcgc cgcgagcgcg atcatggacc agcccagcgc ccagaaaacc
     2941 agcgcactgg tgtacccgta gtccagattg aactgccacc cgaaccgggc cacggtgacc
     3001 tccagcagca gcagccagag gcctcgggtc agcaggaacc aggacagcgc cgagcgggtg
     3061 cggccccggc cgagcgacag atacgccccc gccccggcga gcagcatgaa caccggggcg
     3121 cagaagtggg tcacccagcg ggtgaagaag agggcgacgg tggtctgcgc cggatcggtc
     3181 gggtcgaacc gcgcgctgga caggaaccag cgcgcgtggt cgatcaccat cagcacgatg
     3241 accacgccgc gcatcaggtc gagcccccgc acccgaggag aagctggcat ggccatgtcg
     3301 gacaagatgc ggacggcccc gggggcccgc ttccagaatc gtgcgccggg gcccaccttt
     3361 cgccccatgt tcacgggcga ggccgtcgcc gtgtacgact ggcactgtcc ggggtgcgac
     3421 gcgccggggc acggggagga atacaacgac tcgtacgagg tggtcgtggt ccgtcggggg
     3481 gcgttcgtcc gggaggtgaa cgagtccccc gcgttcatca gcgcgggcac actgatgttc
     3541 gcctccgccg gcgaggttca ccggatcagt catccggtgc cgggtggaga cgcctgctcg
     3601 gtgttccggg gatcgctccc gacgttgcgg gagatcatgg acctgctgga gccgggtgcg
     3661 tgggaccggc aggagccgcg gttccctctg cgccaggcgg cgatcggcgg gcgggagtac
     3721 ctgctgcacc ggctggcgat gcgggccgcg gcggcgggga ccgacgcggt cgagcaggag
     3781 gagtccgccc tgtggttcct ccatgccgcg ctcgccttcg cctggggccg gcgccacggc
     3841 ggcactgctc ccgctcccgg cctcgggcgc gcggcccggc gcagggcgct cgagtacgcc
     3901 gccggggcgg aggatgtagt ccggcggggc tacgccgcca ggctcacgct ggtggagatc
     3961 gggcgggcgg tgggatgctc accctttcat ctgagccgga tggtgcgcgc ggtcaccggc
     4021 ctgtccatcc accggatcct gctgcggtac cgtctgcgcc acgcgctgga gctgatcctg
     4081 gactcgcgag cgggtctgtc cgcggtcgcc ttcgcgaccg gcttcagctc gcacgcccat
     4141 ctcaccgatg cctttcgccg ggaattcggc tgcagcccgg accgggtccg gcgccgttca
     4201 ccggcacaga ttcgcgcgct gctgcacgcg acgcgcgagg ttcacgagga gggacgacat
     4261 gctggagcac atcaccccca ttccgatgct cgcggtgaag gacgtcgcca gggctcggcg
     4321 cttctataag gacacgctgg gtctgcacga ggaccgggac ggcatggagg gcatcctgca
     4381 gttccgcgcc ggcgacacgg cgttcgtggt ctacccgtcg gagtatgccg gcaccaacca
     4441 ggcgaccgcg ctcacctggg tggtgggcga ccggctggag aaggtcatcg aagcgctcaa
     4501 ggcgaagggc gtcgccttcg agcgctacga gctgcccgac acggtccgga agggcgagat
     4561 ccacgagtcc gggccggtgc ggaacgcttg gttcaaggac ccggacggga acatccacgc
     4621 gctcagcagc gtggggtgac aggtgggtga agcggtcact tcagtgtgcc ggtggcatat
     4681 gtcagctcga agtcgccgta gcaccccttc gccacccaga tggactggtc gttgagcccc
     4741 cagctcgagg actgtgcgca ccggcccccg ctccggtcgc gctggagccg gatcgtcgcc
     4801 accgtgccga aggcgttgca cgacatcgcc gacccgcttg tgttcccgca ggtgatggtc
     4861 cgggccggtg tggccggcgc caccggcttc atctgctgcg tggtgtcgcg cccgaaggtc
     4921 acctcgaact cggcccggca gccattcccc gccatgatcg tcgtgctgtt gtacctccag
     4981 ttgtctccct cgcggcacgc cttggtgccc aggttccgca ccagcctgac ccgcgccgcc
     5041 gtcccccccg tgccgcagcg cacctggatc gcggaaccgc tcccgcaggt gacgcgccgg
     5101 gtgccggtcg gcgtggtcgg ggtcgccgtg gcgccccggt aggtgacctc gaactcgccg
     5161 cgacacccct tgctggccca gatggacgag tcggtgtggc cccagttcga gccctcccgg
     5221 cagcgggtgc tggtgaggtc ctgcaccagc cgcacgtcgg tcgcgtaccc gtcggtcctg
     5281 caggtgacct gggttcccga gtagctgccg cagatgatcc ggcgggtctc cggtgagggg
     5341 cctgcggagg tcgtgtcctc gtaggtgacc tcgaacatgc cccggcagcc gctcttggcc
     5401 cagacgaagc cccgggcata gtcccagttg aacttctggc ggcaggccgt ggtgctcagg
     5461 tcgcgcacca ggcggacggt gtcgaccggc ccatcggtgg tgcaggtgtg cagctcgccg
     5521 ctggtcttgc cgcaggtgat ggtgcgggtg accggcttcg cgggactcgg cggcgtcacg
     5581 gcggcccgcc ggtagaccac ctcgaattcg gcccggcagc cgttgcccgc ccacaggagg
     5641 gagtcgctgt acccccagtt ggtgccctcg gtgcagcggg cgaacatggt ctgcttcacc
     5701 agccgcacgc tgtccgccac ccccagggtg ctgcactggt cccgccgggt ggtcagcgtg
     5761 ccgcaggtga tgcggcgcgt ggcggcggtg tccgcggcgc cccggtagcg gacttcgaac
     5821 cggccccggc agctgttgtc gacccagacg gtattgccgg tccaccccca gctcccggcc
     5881 gcgccgcacc ggttggagct caggtcctgc accagcctgg cggacgcgac ctcgccgccc
     5941 gccgcgcaga gcacgcgctg ccgggagtcg gtgccgcatt cgatgactcg cgacggagtg
     6001 gcttgggccg cgagcgggag ggccgggagc cagagcgagg ccgagaccat cagaaggagc
     6061 gccttcacgg aacctccagc gcgagcaggg gacctggggg gctcgatcaa gctaggttcc
     6121 gtcgcgggcg cgaacaagct accgccccgg cgcccggcac catagactag ctgtatgctg
     6181 gacgagcgga ccaactggcc cggcctctac gcctccgcgg tgctcctcgg cgccgggttc
     6241 ggactctttc tcagcctcgg catgctgccc tccgcgcccg actggccctc ggagtggggc
     6301 gtggagccca cgaatcgcat gctcaccatc gtcgtgccgg tcgtgggtgg tgcgctggtg
     6361 ggactggtgc tcgccgcggc ggcccacatc ggggtccgct accagctgcg ccgccgctcc
     6421 tcccgcggcc tcagggcatg acgacggccg atggccggcc ggccggcggg taccccgcgg
     6481 ccctggagat cgactacccc gaccgcgagc tcaaccggct caccaccttc ttccgcccca
     6541 tcgtcttcat cccgatcggc atcctgctcg cgctcctcag cggccccacc agcctcggcg
     6601 ggccaccccg ggagccggga agctccgacc cggtcgtcat gctgacgctc ggggccggcg
     6661 gcatcctgtc gctgcccacc gccctcatgc tggtcttccg ccggaagtac cctcgctggt
     6721 ggttcgactg gaacctcgag ctgagcgggt tcacgacccg ctgcctggtc tatctggcgc
     6781 tgctgcggga cgagtacccc tccaccgagg aggagcagtc ggtccatctg gatctctggt
     6841 accccgacgc ggccacggag ctgaatcgct ggctgccgct ggtgaaatgg tttctcgcca
     6901 tcccgcacta catcgtgctg gcgttcctct gggtcgcggc cgcgctgtgc gtgctcgtgg
     6961 cctgggtcgc catcctcttc accgggcgct acccccgcgg gctgttcgac ttcgtcaccg
     7021 gcgtgttccg ctggacgctg cgggtctggg cctacgcgtt cctgctcacg accgaccgct
     7081 atcccccgtt cagcctcgcc gcggagccgc tagtcgggcc gtcgtgaccc ggttcctgct
     7141 ggccctcgcg ctcggcgcgc cgccggcgct cccggcgcag gtcgcgccgg cggcccgccc
     7201 caacatcgtc gtgttcgtcg gcgacgacct cggttggcgc gacaccgggc cctacggcaa
     7261 cgccgcggtg cggacgccga gcatcgatcg gctggcgcgc tcgggcctgc tggttcgcta
     7321 cgccttcggc acctcgccgc agtgcagtcc ctcccgcatc agcattctgt cgggccggta
     7381 cccgcacgcg accaggaccg aggacctgca catgccgctc ccgcccggcg agcgcctgct
     7441 gccgtcgtac ctccaggcgc agggctactt caccggccac atggccaaga cccactatgg
     7501 ccctctcgcc gagcgccagt tccagtggta cgcggaggag acggccgcgg cgctgccgga
     7561 cttcctcgac gccgccggcg gccggccgtt cttcctctgg gtgggcttcc acgagcccca
     7621 ccggccctgg gactcggtgc ccccgcccgg cgcccaccgg cccgagcgcg cggccgtccc
     7681 gccgcacctg gccgacaccc cggagacgcg gaccgacatc gcccgctact acgacgccat
     7741 cgcgagaatg gaccgggccg tcggcgagat ggcgggggag ctcgagcgcc ggggactccg
     7801 tgacagcacg ctcatcgtct tcctcagcga caacggcgcc cccttccccc gcgagaaggg
     7861 caccctctac gactcgggca tccgcactcc gctgatcttc tcctggcccg cggccgtccg
     7921 cgccggcgcg gtgtacgacc tcggcccggt gagcacgatc gacctcgtgc cgaccctgct
     7981 ggagctggcg gggggccagg tgccggagac ggtgcagggc aggagcttcg gcgagctgct
     8041 gaccgcgccc gagtcgtacg tcccccgcga gtacgtcttc agcgagcgga actggcacga
     8101 ctgcgacgag caccagcgct cggtgcgcac cgagcgctac aagctgatcc gcaccgacgc
     8161 ctacaccggg gtgccgctct gcaccgcggc ggacgtcggt ggcagcccct cgtacctcga
     8221 gctgcgggcc cgggcccggg cggggcggct cacgccggcg cagcgccggc tgttcgaggc
     8281 gccgcgggcc cggctggagc tctacgacct ggagcgggac ccctgggagc tcaccaacct
     8341 ggcggaccac ccggcgcatg cggcgcgggt gcgggagctg gcggcggtgc tgcaggcgtg
     8401 ga
//
LOCUS       DASUYN010000061         2951 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1340272, whole genome shotgun sequence.
ACCESSION   DASUYN010000061 DASUYN010000000
VERSION     DASUYN010000061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2951)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2951)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2951
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1340272"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..410
                     /locus_tag="VF061_01270"
     CDS             <1..410
                     /locus_tag="VF061_01270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668154.1"
                     /translation="SVLATIAVFKYIDLKHRALSASATADLQAVRLAAYSAWYEQGTW
                     PNEAGAGATPPGLAPYLPVGFTFSKPEYTLDWENFVPPGGGTTGSMQLGVVVSSGNGR
                     LMKTLQDNLGSKAPFFVVGGNLTFVIIGPDGRI"
     gene            complement(407..1195)
                     /locus_tag="VF061_01275"
     CDS             complement(407..1195)
                     /locus_tag="VF061_01275"
                     /inference="COORDINATES: protein motif:HMM:TIGR03709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0016776 - phosphotransferase activity,
                     phosphate group as acceptor [Evidence IEA];
                     GO_process: GO:0006797 - polyphosphate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PPK2 family polyphosphate kinase"
                     /protein_id="HEX6668155.1"
                     /translation="MPALTDAEARLAKEAVPDKDELRQELAALTERLDRLQRQLYADG
                     GRALLVVLQGRDASGKDGTLRWVFGPLDPLGVTATSFKVPTEEELRRDFLWRIHRAVP
                     ARGTIGVFNRSHYEDVLVVRVRRLVPESVWRPRYEQINLFERHLVENGTVILKFLLHI
                     SREEQGERLLERLHDPEKYWKFNAGDLAERELWDEYTAAYREMLQRTSTAAAPWYVVP
                     ADSKRVRDVLIARTVVETLERVDPQWPGPPPELEALRGALDPGR"
     gene            complement(1237..>2951)
                     /locus_tag="VF061_01280"
     CDS             complement(1237..>2951)
                     /locus_tag="VF061_01280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668156.1"
                     /translation="KILSHGEHLRAEWPVAGTTGYDFLNQAEALFLDPAGYEAIEEDY
                     RRVIRQPLEFPAIARQGKRLVLETGLSAGVRRLADRLLMLAAPAHPLSALRRQDLLRA
                     IVETIVALPVYRTYIDGRSPTPGPEDRRLLEDALAEARTRGRSSPAALDLLERALLTH
                     LRFAERYQQISGPATAKGVEDTAFYAYAPLLSRNEVGGGPEARLDHAVADFHAANTER
                     AARWPGGMLAVSTHDTKRTADVRARLDVLSEIPAEWAKRLQLWRRLNLPHKMTIGGRR
                     VPDPGTVHHLLQAMVGVWPLEPLAVGDLDLLRERLTGYMEKAAREAKLRTTWTDPDTE
                     FEAALRADIEALLDPARSPRFLDDLERLVGRIARPGLWNALARTVLHLASPGVPDLYQ
                     GDELWSFALVDPDNRRPVDFERRRRLLDEVERGISGAPADRESFLRRLVASPEDGRLK
                     LHVIRSALAARRARPDAFRSRAYQPLAATGRAAARIVAFGRGDGAERLVAVVPRWLAR
                     LEGEPTERSLWEGTGLPLPQGWPARWACALSGRALTAGAGSLDVAELFAVLPVALLLA
                     EPAP"
BASE COUNT          409 a         1084 c         1053 g          405 t
ORIGIN      
        1 tctccgtcct cgcgaccatc gccgtgttca agtacatcga cctgaagcac cgcgcgctgt
       61 ccgccagtgc gaccgccgac ctgcaggcgg tccgcctcgc cgcgtacagc gcctggtacg
      121 agcagggcac ctggcccaac gaggccggcg cgggagccac cccgccgggt ctcgctccct
      181 atcttcccgt cgggttcacc ttctcgaagc cggagtacac gctcgactgg gagaacttcg
      241 tgcccccggg cggcgggacg accggatcca tgcagctcgg cgtggtcgtg agcagcggca
      301 acgggcggct gatgaagacg ctgcaggaca acctgggcag caaggcgccc ttcttcgtgg
      361 tgggcgggaa tctcaccttc gtgatcatcg ggcccgacgg ccggatctag cgtccgggat
      421 cgagcgctcc gcgcagcgcc tcgagctcgg gcggcggccc gggccactgc gggtccaccc
      481 gctccagggt ctccaccacc gtccgcgcga tgagcacgtc gcgcacgcgc ttgctgtcag
      541 cggggacgac gtaccagggc gcggccgccg tgctggtacg ctgcagcatc tcccggtacg
      601 cggccgtgta ctcgtcccac aactcccgct ccgccagatc ccccgcgttg aacttccagt
      661 acttctccgg gtcgtgcagg cgctccagca gccgctcgcc ctgttcctcg cgcgagatgt
      721 gcagcaggaa cttgaggatc acggtgccgt tctccaccag gtgccgctcg aacaggttga
      781 tctgctcgta gcggggtctc cagaccgact cgggcacgag gcgccgcacc cggacgacca
      841 ggacgtcctc gtagtgcgac cggttgaaga ccccgatcgt cccccgcgcg ggcacggcgc
      901 ggtggatccg ccagaggaag tcacggcgaa gctcctcctc cgtcggcacc ttgaagctcg
      961 tcgccgtcac gccgagcggg tcgagggggc cgaagaccca gcgcagcgtg ccgtccttgc
     1021 ccgaagcgtc cctgccctgc agcaccacca ggagcgcgcg accgccgtcg gcgtagagct
     1081 gccgctggag ccggtcgagc cgctcggtga gcgccgccag ctcctgccga agctcgtcct
     1141 tgtccggcac cgcctccttg gcgaggcggg cctcggcgtc ggtcagggcc ggcaccgctc
     1201 ctggcggaag cggagacagc ctgatggcgg acccgctcat ggggcgggct cggcgagcag
     1261 gagggcgacc gggaggacgg cgaacagctc ggcgacgtcg agtgagccgg ctccagccgt
     1321 cagcgcccgg ccgctgaggg cgcaggccca acgcgcgggc catccctggg gcagcggcag
     1381 cccggtcccc tcccagaggc tccgctccgt cggctcgccc tcgagccgcg ccagccatct
     1441 cggcactacc gcgaccagcc gctcggcgcc gtccccgcgc ccgaacgcca cgatgcgggc
     1501 ggcggcacgc ccggtggccg ccagcggctg gtaggcacgt gaccgaaacg catcgggtct
     1561 cgcccgacgc gcggccagcg ccgagcggat gacgtgcagc ttgagccggc cgtcctccgg
     1621 gctcgcgacc aaccggcgca ggaaggactc acggtccgcc ggcgcgcccg agatcccccg
     1681 ttccacctcg tccagcagcc gccggcgtcg ctcgaagtcc acggggcgcc ggttgtccgg
     1741 gtccaccagg gcgaagctcc acaactcgtc gccctggtac aggtccggca cccccggcga
     1801 ggcgaggtgg agcaccgtgc gggccagggc gttccacagg ccaggccgcg cgatccggcc
     1861 aaccagccgc tcgagatcgt cgaggaagcg cggcgagcgg gcaggatcga gcagggcctc
     1921 gatgtccgcc cgaagggcgg cctcgaactc cgtgtcggga tcggtccagg tggtgcgcag
     1981 cttcgcctcc ctcgccgcct tctccatgta gccggtgagc cgctcgcgca gcaggtcgag
     2041 gtcgccgacg gccagcggct ccagcggcca tacgcccacc atggcctgga ggagatggtg
     2101 gaccgtgccg ggatccggca cgcggcggcc gccgatggtc atcttgtgcg gcaggttgag
     2161 ccggcgccag agctggagcc gcttcgccca ctcggccggg atctcgctca gcacgtccag
     2221 ccgggcgcgt acgtcggcgg tgcgcttggt gtcgtgggtg ctgaccgcca gcatgccgcc
     2281 gggccatcgc gccgcccgct cggtgttggc ggcgtgaaag tcggccaccg cgtgatcgag
     2341 ccgcgcctcg ggaccgccgc cgacctcgtt gcgggacagc agcggcgcgt aggcgtaaaa
     2401 ggcggtgtcc tcgactccct tggcggtggc cgggccgctg atctgctggt accgctccgc
     2461 aaatcggagg tgggtgagga gggcgcgctc cagcaggtcg agcgccgcgg ggctgctccg
     2521 gccgcgggtc cgcgcctcgg ccagcgcgtc ctccagcagc cgccggtcct cgggcccggg
     2581 cgtcggggag cgaccgtcga tgtaggtgcg gtacaccggg agggcgacga tcgtctcgac
     2641 gatggcgcgc agcaggtcct gccgccgcag ggcggagagc ggatgggcag gggcggcgag
     2701 catgagcagc cgatccgcca gccggcgcac gccggcggag agcccggtct cgagcaccag
     2761 ccgcttgccc tgccgcgcga tcgccgggaa ctccagcggc tgccggatca cccgacggta
     2821 gtcttcctcg atggcttcat acccggccgg atcgaggaac agcgcctccg cctggttcag
     2881 gaaatcgtac ccggtggtac cggcgacggg ccattcggcc ctgaggtgct cgccgtggct
     2941 gaggatcttc t
//
LOCUS       DASUYN010000062         5221 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1120152, whole genome shotgun sequence.
ACCESSION   DASUYN010000062 DASUYN010000000
VERSION     DASUYN010000062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5221
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1120152"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..381
                     /locus_tag="VF061_01285"
     CDS             <1..381
                     /locus_tag="VF061_01285"
                     /inference="COORDINATES: protein motif:HMM:NF014218.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytosine permease"
                     /protein_id="HEX6668157.1"
                     /translation="WKLYSDAAAYIFTWLVGYSSLMGALGGILIADYWVLRRQRLLLD
                     DLYRERGAYTYRGGVNWRAVAALVVAVLPVVPGFIRAATTPGGAVMDPDIFDRLYAYA
                     WFVTFAISFVAYLALMRRLHPDEA"
     gene            complement(386..2971)
                     /locus_tag="VF061_01290"
     CDS             complement(386..2971)
                     /locus_tag="VF061_01290"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX6668158.1"
                     /translation="MLADRYRIERELGQGGMATVYLARDLRHERQVAIKVLRPDLAAV
                     IGAERFLREIKTIAHLQHPHILGLIDSGEVAGTAYYVMPFVEGESLRDRLRREKQLPV
                     ADAVRIATEIAAALGYAHRHGVIHRDIKPENVLLHDGAALVTDFGIALAISTAGGTRM
                     TETGMSLGTPHYMSPEQAMGEREITARSDVYALGVVTYEMLVGEPPFTGPTAQAVIAK
                     VLTDEPRPPTGQRKTVPPAIEAAVLTALAKLPADRFGSAGEFAAALAAQAPPPKPSRV
                     FAAPSRAALAAVALGALVVGMGIGALAAGRRGDMRPSFGAAFKVTYEPSMEIHPALSP
                     DGRFLAYAGGNPLRTRVYVRQVSGGRPTLLTDDSAAVEVSPSWSPDGTRILFANQHGL
                     FSVSASGGAPRQEAPARAAGPIIWSQWSPDGQTAAYVVADSIFVKPTGAATRLLTTST
                     SVTGCRWSPDGTRLVCAAGNAYFTMVGALFGNLAPSWIEQVDVRSGGRTVMTDSAGIN
                     HSPVWSPDGRFIYFVSDRAGPADIYRIPAEGGRAAPERLTVGLGVQSLSLSADGRRLA
                     YNVYRTVGNIWSVPFGPRPMSLRDATQITRGNQSVENITVSADGKLVYYDSDLSGTSQ
                     IYRVPVGGGEQERLTTENHQDFAPAPSPDGRTLAFHSTRTGSRDVFLMSLDDGSLTQL
                     TRTPDPEVLPRWSPDGRMLAWGLLGVTGGIRLVRRVPGGSFGTPTERLEWGLSPSFSP
                     DGRWIAFGDAPVGTRRLFVMPVDSGAPRSPVDSGGAPPPDVTFPKFSLDGREIMFLGT
                     DRTGMPGIWSVPWPAGGRPELVLRFDDPVRQPYRPYWALSRDRLFVLLQESESDVWVV
                     ETEGM"
     gene            3141..4010
                     /locus_tag="VF061_01295"
     CDS             3141..4010
                     /locus_tag="VF061_01295"
                     /inference="COORDINATES: protein motif:HMM:NF012993.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HEX6668159.1"
                     /translation="MPRTVKCGLIQASHACSTAEELATIREANLAKHMELIDRAGREG
                     VQILCMQEIFTGPYFCAEQSPRWYDAVEAIPDGPTTRLMQEVARKYQMAIVVPLYEED
                     GAGIYYNTAAVIDADGSYLGKYRKNHIPHCAPGFWEKFYFRPGNLGYPVFKTRYADVG
                     VYICYDRHFPEGARELGLNGAEIVFNPSATVAGLSEYLWRLEQPAHAVANAFFVGAIN
                     RVGYEDPWRIGEFYGQSYFCNPRGQMVAEAARDRDELVTAELDLDQIREVRNVWQFYR
                     DRRPETYGGIARL"
     gene            complement(4080..>5221)
                     /locus_tag="VF061_01300"
     CDS             complement(4080..>5221)
                     /locus_tag="VF061_01300"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX6668160.1"
                     /translation="TLRQAVTFYEQAVALDSTFVGAWAALSEAASLAYGVGAPSPGLA
                     ERSRAAADRAIALDGEHPDGYRALGDYHRRIAGSAARAVEFYAKGLALAPDDADLLRG
                     LGLAEQSSGKWEQAVEHLRQSQSLDPRSAPTAEALGNVLLWLRRYDDALQALDHGLAL
                     EPSSLQTIEDKAMVFLARGDLEGARKILSEAPPGVDLPTFVAYMATYWDLYWVLSAEQ
                     RDLVTRLRPSAFDGDAGSWGLALAGVYEVEGDMRRAAAYGDSARIAIEQQLIAAPENA
                     QTNVLLGVALAYAGRKAEAIQRGLKATELVPPGADGLTGAYFQHQLARIYILVGDAEK
                     ALDTLEPLLKVPYYLSPAWLRIDPTFDPIREHPRFQRLAGNGLSP"
BASE COUNT          786 a         1747 c         1920 g          768 t
ORIGIN      
        1 tggaagctct actccgacgc ggcggcgtac atcttcacct ggctggtggg gtactcgagc
       61 ctgatgggag cgctcggcgg gatcctgatc gcggactact gggtgctgcg gcggcagcgg
      121 ctgctgctcg atgatctcta ccgggagcgg ggggcgtaca cctaccgggg cggggtgaac
      181 tggagagcgg tcgcggcgct cgtggtcgcc gtgctgccgg tggtgccggg gttcatccgg
      241 gcggcgacga cgccgggcgg ggcggtgatg gatcccgaca tcttcgatcg gctgtacgcc
      301 tacgcgtggt tcgtcacctt cgcgatcagc ttcgtggcgt atctcgcgct catgcggcga
      361 cttcatcccg acgaagcgta gcgggctaca tcccctccgt ttccaccacc cacacgtcgc
      421 tctccgattc ctgcagcagc acgaacaggc ggtcccggct gagtgcccag taaggccggt
      481 acggctgccg caccggatca tcgaaccgca ggaccagctc gggccgcccg ccggcgggcc
      541 agggcacaga ccagatgccc ggcatcccgg tccggtccgt gcccaggaac atgatctccc
      601 ggccgtcgag ggagaacttg gggaaggtca cgtcgggtgg cggcgcgccg cccgagtcga
      661 ccggtgatcg gggcgcccca gagtccaccg gcatgacgaa caggcgtcgg gttccgaccg
      721 gagcgtcgcc gaaggcgatc caccgtccgt caggcgaaaa actgggcgag aggccccact
      781 cgagccgctc ggtcggtgtg ccgaaggagc cacccggcac tcgcctcacc agccggatgc
      841 cgccggtgac gccaagaagg ccccacgcca gcatccgccc gtccggcgac cagcgcggaa
      901 gcacttccgg gtccggcgtc ctggtgagct gcgtcaggga gccgtcgtcg agcgacatga
      961 ggaagacatc gcgtgagccg gtgcgggtcg aatggaaggc cagcgtgcgc ccatcgggcg
     1021 agggcgcagg ggcgaaatcc tggtggttct cggtcgtgag ccgttcctgt tcgccgccgc
     1081 cgacgggtac ccggtagatc tgcgacgtgc cgctcaagtc actgtcgtag tacacgagct
     1141 tcccgtcggc cgacacggtg atgttctcca cgctctggtt gccgcgcgtg atctgggtcg
     1201 cgtcgcgcag actcatcggc cgaggtccga acggcacgga ccagatgttc cccactgtac
     1261 ggtagacgtt gtacgcgaga cgtcggccgt cggcggagag cgagaggctc tggacgccga
     1321 ggccgacggt gaggcgctcg ggtgccgcgc gcccgccctc ggccgggatc cgatagatat
     1381 cggccgggcc cgcgcgatcg gagacgaagt agatgaaccg gccgtccggc gaccagacgg
     1441 gcgaatgatt gatgccggcg ctatcggtca tcacggtcct gccgccgctc cgcacgtcca
     1501 cctgctcgat ccagctcggc gccagattcc cgaacagcgc gccgaccatg gtgaagtacg
     1561 cattgccggc ggcgcacacg agtcgcgtgc cgtcgggtga ccatcggcag cccgtcacgc
     1621 tcgtgctggt ggtgaggagc cgggtcgccg cgccggtcgg cttcacgaag atggaatccg
     1681 ccaccacgta cgcggcggtc tgcccgtcgg gcgaccactg cgaccagatg atgggcccgg
     1741 ccgcgcgcgc gggcgcctcc tgccgaggcg cgccgccgga ggccgagacg gagaacaggc
     1801 cgtgctgatt ggcgaacagg atccgggtcc cgtccggcga ccagctcggc gagacctcga
     1861 ccgccgcgga gtcgtcggtg aggagtgtcg gccgaccgcc gctcacctgg cgcacgtata
     1921 ccctggtgcg aaggggattg ccgccggcgt aggccaggaa ccggccgtcg ggggagagcg
     1981 cggggtggat ctccatggac ggctcgtagg tcaccttgaa tgcggcgccg aaggaaggcc
     2041 gcatgtcccc gcggcgcccc gcggcgagcg cgccgattcc cattccgacc acgagcgccc
     2101 ccagcgccac ggccgcgagc gcggcgcgag agggcgcagc gaagacgcgc gacggcttcg
     2161 gcggcggagc ctgcgcggcg agcgccgccg cgaactcccc ggcgctgccg aaccggtcgg
     2221 ccgggagctt ggcgagcgcg gtgagcacgg cggcttcgat ggccggcggc acggtcttgc
     2281 gctgcccggt gggcggccgc ggctcgtcgg tcagcacctt ggcgatgacg gcctgtgccg
     2341 tggggccggt gaacggcggc tcacccacca gcatctcgta ggtcacgacg ccgagggcgt
     2401 agacgtcgga gcgggcggtg atctcgcgct cgcccatcgc ctgctcgggc gacatgtagt
     2461 gcggcgtgcc gagcgacatg ccggtctcgg tcatgcgggt gccgcccgcg gtggagatcg
     2521 cgagggcgat gccgaagtcg gtgaccaggg cggcgccgtc gtggagcagg acgttctcgg
     2581 gcttgatgtc ccggtggatg accccgtgac gatgggcgta tcccagcgcg gcggcgatct
     2641 cggtcgcgat gcgcacggcg tcggcgaccg gcagctgttt ctcgcgcctc agccggtcac
     2701 gaagcgattc gccttcgacg aacggcatca cgtagtacgc ggtgccggcg acctcgccgg
     2761 agtcgatgag gccaaggatg tggggatgct gcaggtgggc gatcgtcttg atctcccgga
     2821 ggaaccgctc ggcgccgatc acggccgcga ggtccgggcg cagcaccttg atggcgacct
     2881 ggcgctcgtg gcggaggtcg cgcgcgagat agacggtggc catcccgccc tggccgagct
     2941 cacgctcgat gcggtagcgg tcggcgagca ccaggcggag gcgctggacg gcgtcggtca
     3001 ggctgagctc tcggcgaggg atgggcgagc gatgggagcg ctctgcctga agttaggccc
     3061 tgcgttcggg gtgggctagg cacgccggga agcgtccgac gtccttctcc ctggccctgc
     3121 ttcgatgaca tattgcccgc atgccccgaa ccgtgaagtg cggcctgatc caggcctctc
     3181 acgcctgctc caccgcggag gagctcgcca ccatccgcga ggccaacctg gccaagcaca
     3241 tggagctgat cgaccgggcc gggcgggagg gggtgcagat cctctgcatg caggagatct
     3301 tcaccggccc ctacttctgc gccgagcaga gcccgcggtg gtacgacgcg gtcgaggcga
     3361 tcccggacgg gccgacgacc cggctgatgc aggaggtcgc ccgcaagtat cagatggcga
     3421 tcgtggtgcc cctctacgag gaggacggcg ccgggatcta ctacaacacc gccgccgtga
     3481 tcgacgcgga cgggtcctac ctcggcaagt accggaagaa tcacatcccc cactgcgcgc
     3541 cgggattctg ggagaagttc tacttccggc ccggcaacct gggctacccg gtgttcaaga
     3601 cccgctacgc cgacgtcggg gtctacatct gctacgaccg ccacttcccc gagggtgcgc
     3661 gggagctggg cctcaacggc gcggagatcg tcttcaaccc ttcggccacg gtggctgggc
     3721 tgtcggagta tctctggcgg ctggagcagc cggcgcacgc ggtggccaac gcgttcttcg
     3781 tcggggcgat caaccgggtg gggtacgagg atccctggcg gatcggcgag ttctacgggc
     3841 agagctactt ctgcaacccg cgcgggcaga tggtggcgga ggcggcgcgc gaccgggacg
     3901 agctggtgac ggcggagctg gatctggacc agatccggga ggtgcggaac gtgtggcagt
     3961 tctaccggga tcgtcggccg gagacgtacg gggggatcgc caggctgtag gggcaccccc
     4021 ccgtgtcacc ctgagcgaag cgaagggggc catgctcgaa atggtcccct tcgctgcgct
     4081 cagggtgaca agccgttccc cgccagccgc tggaaccggg gatgctcccg gatcggatcg
     4141 aaggtcgggt cgatgcggag ccacgccggg gagaggtagt agggcacctt caggagcggc
     4201 tccagcgtgt cgagcgcctt ctccgcgtcg cccacgagga tgtagatccg ggccagctgg
     4261 tgctggaaat acgcgccggt cagcccgtcc gcccccggcg gcacgagctc cgtggccttc
     4321 agcccccgct ggatcgcttc cgccttgcgc cctgcgtatg ccagcgccac gccgagcagc
     4381 acgttggtct gggcgttttc cggtgcggcg atgagctgct gctcgatcgc gatccgggcg
     4441 gagtccccgt acgccgcggc tcgccgcatg tcaccctcca cctcgtagac gccggcgagg
     4501 gccagtcccc aggagccggc gtcgccatcg aaggccgagg gccgcaggcg cgtgacgaga
     4561 tcgcgctgct cggcgctgag cacccagtag aggtcccagt aggtcgccat gtaggcgacg
     4621 aaggtgggca ggtcgacgcc cggcggggct tcactcagga tcttccgggc gccctccaga
     4681 tcgccacgag cgaggaatac catcgccttg tcctcgatcg tctggagcga ggacggctcc
     4741 agcgcgagcc catggtccag ggcctggagc gcatcgtcgt agcgccggag ccagaggagc
     4801 acattgccaa gcgcctcggc cgtgggggcg gacctgggat ccaggctctg gctctgccgg
     4861 aggtgctcca cggcctgctc ccacttgccc gacgactgct cggcgagccc gagcccccgg
     4921 agcaggtccg cgtcatcggg agcgagggcg aggcccttgg cgtagaactc gacggcacgg
     4981 gcagcgctgc cggcgatgcg gcggtggtag tcgcccagcg cgcggtatcc gtccgggtgt
     5041 tccccgtcga gggcgatggc ccggtcggcc gcggcgcgag accgctcggc gagccccggt
     5101 gacggcgctc cgacgccgta cgccagcgac gcggcttccg acaaagccgc ccaggcgccg
     5161 acgaacgtgg agtcgagcgc caccgcctgc tcgtagaagg tgacggcctg gcgcaaggtg
     5221 a
//
LOCUS       DASUYN010000063         5020 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1340799, whole genome shotgun sequence.
ACCESSION   DASUYN010000063 DASUYN010000000
VERSION     DASUYN010000063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5020
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1340799"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1760
                     /locus_tag="VF061_01305"
     CDS             <1..1760
                     /locus_tag="VF061_01305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668161.1"
                     /translation="KLDGAGAVRAVDPRALLHFLSRSGLSPADAAGPHGGRTVAAHFD
                     ADHYLLGSVVEAAGRLQATASLYQRDGEQETSARAAAESESELFELVDELVRQLLASR
                     KLAHGTRLGRIAALTTASLDALRAYLQGERELRAGRYFDALERFQAAVEADPSFALAY
                     YRSAAAAAGCALPDLARDLAQHAHEHRARLSPHDQLVLSAQRGWLDGAIGEAESLYTT
                     TTGTYPDDVEVWFHLGDLLFHCNPLRGRSAVEARTPFERVLSLEPDHLQAMIHLARIA
                     ALEGHRDEMLALIGRALRAGPDADQALAMRSLRAYAVRDASGIEALAGELRSARAVTV
                     ASAFADIALYAGDLEGAESLARQFLAVARAPELRALCHIQLAHLALAQGRGHLAAEEL
                     RQAETLDRAWGLETRALLALLPFAPAPEAELEALRADLRAWDAAGVPPSSFPILAMHN
                     GLHAPIREYLLGLAAARLGDRAAATSHSAELARQNPRDGHLIDCLATELDATLARDDG
                     RPGEALSLLERTRPRLWYQLTVASPVFCLASRRYLQAELLREAGRVEEAAGWYTSLVQ
                     RSPYELVYRRAAGGKAVRR"
     gene            complement(1914..2837)
                     /locus_tag="VF061_01310"
     CDS             complement(1914..2837)
                     /locus_tag="VF061_01310"
                     /inference="COORDINATES: protein motif:HMM:NF015587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HEX6668162.1"
                     /translation="MTVRDLGWIFKRALAGWWNDNVPRLGASLAYYTLFALAPILIVA
                     ITIAGLVFGAETVQRQVTGEISGLVGEEGGRAVRAMLEGASQRGSDGLATAVGLVTFF
                     LGSTGAFLELQTALNAIWRVKPKPDAGLKDMLLQRLLSFGLVVGVGFVLLVSLLVSAA
                     LSALNSYLGSLVPEIAVIWQGVNTLVSLGVVTLLFAMIYQFLPDADLKLRHVWLGALV
                     TAGLFNIGKYLIGLYLGTSGVASAYGAAGSVVVLLVWVYYSAQIVLLGAEFTRAYVER
                     FGDRPTPSLHATKDPKPEATGGKGNGGAVGR"
     gene            complement(2834..3865)
                     /locus_tag="VF061_01315"
     CDS             complement(2834..3865)
                     /locus_tag="VF061_01315"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX6668163.1"
                     /translation="MSLPRRIRLTIGCVLLAACAPSSSPGGESPIAPDEVRAIVGVLA
                     ADSLEGRRTGTPGAARAARFLAERMRAYGLEPGGDSSYFQRVTYEISQGPEGEMLRLA
                     HPDSAAAAERVVDYNLIGLVRGTDPALRSQAIVLGAHFDHVGIGKPVEGDSIYNGADD
                     DASGVATVLAAARALAQAPPRRTVVILLTGGEEFGVLGTQWYLERPAIPLAETVADLQ
                     VEMVGRPDTLVGAGKLWLTGFERSTMGATLTRAGLPVVADPRPELRFFERSDNIVFAH
                     QGIPAHTLSSFGLHPDYHQPSDEVERIDFDHLTRAAELVAQAARVLADGPRPVWNPGG
                     RPAPRYPEP"
     gene            complement(3891..>5020)
                     /locus_tag="VF061_01320"
     CDS             complement(3891..>5020)
                     /locus_tag="VF061_01320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668164.1"
                     /translation="IAKSTLARELARPIEGPVPAPDPRPDVYLIVLDEYANGDVLLER
                     FGYDNRLFEDSLRALGFHVPRTVRSNYLHTLLSIPSLLNAAHLTALEQDVGKRADHPR
                     LPNHLLEHSRVVRYLQERGYEYVFFSSDWWHATSGSPQANVVFHAFRGFDIMRAMGGG
                     ELQRLVRGITLLSYFGRSHRWEAEQVHRTLAGLAGLAGTGTHPRFAFAHILKPHDPYV
                     FGPDCEVLSRQKQDDDVGPYLEQLECLNGLLLDTVGRILAESKVPPVIILQGDHGTKL
                     LHATGYDDPGEVPPPAARERFGAFGAYYLPDGGAEVFGDTVTIVNVMGNVLRHYFGAD
                     LPRTGDELYISPADHPYDFRKVDAEWLARGGTLGRKAGAGR"
BASE COUNT          723 a         1840 c         1759 g          698 t
ORIGIN      
        1 ccaagctgga cggcgccggc gccgtgcggg cggtggatcc cagggcgctg ctccacttcc
       61 tgtcgcggag cgggttgagc cccgccgacg cggcgggacc acacggggga cgcacggtcg
      121 cggcgcactt cgacgccgac cactacctgc tcggctccgt ggtcgaggcg gccggcaggc
      181 tccaggcgac agcttcgctc taccagcgcg atggggagca ggagacctcg gcccgcgccg
      241 cggcggagag cgagtccgag ctgttcgagc tggtggatga gctggtccga cagctcctcg
      301 cctcccgcaa gctcgcccac ggcacccggc tcggccggat cgcggcgctc acgaccgcct
      361 ccctcgacgc gttgcgcgcg tacctccagg gcgagcgcga gctgcgggct ggacgatact
      421 tcgacgcgct ggagcggttc caggcggcgg tggaggccga cccctccttc gcgctggcct
      481 actaccgctc ggccgcggcc gcggcgggct gcgcgctgcc ggacctcgcc cgcgacctcg
      541 cccagcacgc gcacgaacac cgcgcccggc tctcgcccca cgaccagctg gtgctgagcg
      601 cccagcgcgg ctggctcgac ggcgcgatcg gggaggcgga gtcgctctac accaccacca
      661 ccggcaccta ccccgacgac gtcgaggtct ggttccacct cggcgacctg ctcttccact
      721 gcaatccgct ccgcggccgc tccgcggtgg aggcgcggac ccccttcgag cgagtgctct
      781 cgctggagcc ggaccatctg caggcgatga tccatctcgc ccgcatcgcc gccctcgagg
      841 ggcaccgcga cgagatgctg gccctgatcg gccgcgcgct ccgtgccggt cccgacgccg
      901 accaggcgct cgccatgcgg tcgctgcggg cttacgccgt acgggatgcc tcgggcatcg
      961 aggccctggc cggggagctg cgctccgcac gcgccgtcac ggtcgccagc gccttcgccg
     1021 acatcgcgct ctatgccgga gacctcgagg gagccgagtc gctcgcccgg cagttcctcg
     1081 cggtggcgcg cgcgccggag ctgcgcgcgc tgtgtcacat ccagctggcg cacctcgcgc
     1141 tggcccaggg cagaggtcac ctggccgcgg aagagctgcg gcaggcggag acgctggacc
     1201 gggcgtgggg actggagacc cgcgcgctgc tggcgctgct gcccttcgcg cccgcgcccg
     1261 aggccgagct cgaggcgctg cgcgcggacc tccgcgcctg ggacgcagcc ggcgtcccgc
     1321 cgagcagctt cccgatcctc gcgatgcaca acggcctgca cgccccgatc cgggagtacc
     1381 tcctgggcct ggccgctgcg aggctgggcg accgcgccgc ggccacgtcg cactcggccg
     1441 agctcgcgcg ccagaacccg cgcgatggcc acctgatcga ctgcctggcc accgagctgg
     1501 acgccaccct ggcgcgcgac gacggccgtc cgggcgaggc gctgtcgctg ctggagcgca
     1561 cccgcccccg cctctggtac cagctcacgg tggcctcccc cgtcttctgc ctcgcctcgc
     1621 gccggtacct ccaggccgag ctcctgcggg aggccgggcg cgtcgaggag gcggccggct
     1681 ggtacacctc tctggtgcag cggtcgccgt atgagctggt gtatcggagg gcggcgggcg
     1741 gtaaggcggt aaggcggtag ggcggtaggg cggtagggcg gtacggcggt aaggcggtaa
     1801 ggcggtagtc ggtgggtgtc atcctgagcg cagcgaagga ggccatgtgc gggcatggcc
     1861 tccttcgctg cgctcaggat gacacccaca gaacacctac ggcccttacc gccttaccgc
     1921 cccaccgccc ccccgtttcc cttccccccc gtcgcctcgg gcttcgggtc cttcgtcgca
     1981 tgcagcgacg gcgtcggccg gtctccgaag cgctccacgt aggcccgggt gaactcggcg
     2041 cccaggagca cgatttgcgc ggagtagtac acccacacca gcagcaccac caccgaaccg
     2101 gccgcgccgt aggcggaggc cactccgctg gtgccgagat agaggccgat caggtacttg
     2161 ccgatgttga acagccccgc cgtcaccagc gctcccagcc acacgtgccg cagcttgagg
     2221 tccgcgtcgg gcaggaactg gtagatcatc gcgaacagca gcgtcaccac ccccagcgag
     2281 accagggtgt tgaccccctg ccagatcacc gcgatctcgg ggaccaggct gccgagatag
     2341 ctgttcagcg cgctgagggc ggcgctcacc agcagcgaca ccaggagcac gaacccgact
     2401 ccgaccacca ggccgaacga cagcagccgc tggagcagca tgtccttgag cccggcgtcg
     2461 ggcttgggct ttactcgcca gatcgcgttc agcgcggtct gcagctcgag aaacgcgccg
     2521 gtcgagccca ggaagaaggt caccagaccc accgccgtgg cgaggccgtc gctgccccgc
     2581 tgtgacgcgc cctccagcat cgcccgcact gccctgccac cctcctcccc caccagcccg
     2641 ctgatctcgc cggtcacctg ccgctgcacc gtctccgcgc cgaacaccag gcccgcgatg
     2701 gtgatggcca cgatcaggat aggtgcgaga gcgaacagcg tgtagtacgc cagcgaggcg
     2761 ccgaggcgcg ggacgttgtc gttccaccat cccgccaggg cgcgcttgaa gatccaaccg
     2821 agatcgcgga cggtcatggc tcagggtagc ggggtgcggg tcggcccccc gggttccaca
     2881 ccggccgggg gccgtcggcc aggacgcggg ccgcctgcgc caccagctcg gccgccctgg
     2941 tgaggtggtc gaagtcgatc cgctcgacct cgtccgaggg ctggtgatag tcggggtgca
     3001 gaccgaacga cgacagcgtg tgcgccggaa tgccctggtg ggcgaacacg atgttgtcgc
     3061 tccgctcgaa gaacctgagc tccggcctgg ggtccgccac cacgggcagt ccggcgcggg
     3121 tgagcgtcgc gcccatggtg gaccgctcga agccggtgag ccagagcttc cccgcaccca
     3181 ccagcgtgtc gggccgcccg accatctcga cctggagatc ggccaccgtc tccgcgaggg
     3241 ggatcgcggg tcgctccagg taccactggg tgcccagcac gccgaactcc tcgccgccgg
     3301 tgaggaggat gaccaccgtg cgcctgggcg gggcctgggc gagcgcgcgc gccgccgcga
     3361 gcaccgtcgc cacgccggag gcgtcgtcgt cggccccgtt gtagatcgag tcgccctcga
     3421 ccggcttgcc gatacccaca tgatcgaagt gcgcgccgag gacgatcgcc tggctccgca
     3481 gggcgggatc ggtgccgcgc accaggccga tgaggttgta gtccaccacc cgttcggccg
     3541 cggcggccga gtcgggatgg gccagccgca gcatctcccc ctcggggccc tgggagatct
     3601 cgtacgtcac ccgctggaag tagctgctgt cgccgcccgg ctccaatccg tatgcgcgca
     3661 tccgctccgc caggaaccgc gccgcccgcg cggcacccgg cgtgcccgtg cgccgtccct
     3721 ccagcgagtc ggccgcgagc acgccgacga tcgctcggac ctcgtcgggc gcgatcgggg
     3781 actcgccgcc gggcgaggac gagggcgcgc aggccgcgag caggacgcat ccgatcgtga
     3841 gccggatccg gcggggaagc gacatcgggt ctcctcgagt cgagcgtgtc tcagcggccg
     3901 gcaccggcct tccggcccag cgtgccgccg cgggccagcc actcggcgtc caccttgcgg
     3961 aaatcgtagg gatgatccgc cggagagata tacagctcgt cgcccgtccg gggcaggtcg
     4021 gccccgaagt aatggcgcag gacgttgccc atgacgttca cgatcgtgac cgtgtcgccg
     4081 aagacctccg cgccgccgtc gggcaggtag tacgcgccga aagcgccgaa gcgctcccgg
     4141 gcggcgggtg ggggaacctc tccgggatcg tcgtaccccg tggcgtgcag cagcttggtg
     4201 ccgtgatccc cctgaaggat gatgacggga ggtaccttcg actccgccag gattcgcccg
     4261 acggtgtcga gcagcaggcc gttcaggcat tccagctgtt cgaggtacgg ccccacatcg
     4321 tcgtcttgct tctgcctcga cagcacctcg cagtcggggc cgaacacgta ggggtcgtgt
     4381 ggcttgagga tgtgcgcgaa ggcgaagcgc ggatgggtgc cggtccccgc caggccggcc
     4441 aggcccgcga gcgtgcggtg cacctgctcg gcctcccacc ggtggctccg gccgaaatag
     4501 ctcaggaggg tgatgccccg caccaggcgc tgcagctcgc ccccgcccat cgcccgcatg
     4561 atgtcgaagc cgcggaacgc atggaacacg acgttcgcct gggggctccc gctggtggcg
     4621 tgccaccagt cggaggagaa gaacacgtat tcgtagccgc gctcctggag gtagcggacc
     4681 acccggctgt gctccagcag atgattcggc agccgcggat ggtccgcccg cttcccgacg
     4741 tcctgctcca gcgccgtcag gtgggcggca ttgagcagcg aggggatcga gagcagcgtg
     4801 tggaggtagt tgctccgcac cgtccgcggc acgtggaagc ccagcgcgcg caggctgtcc
     4861 tcgaagagtc ggttgtcgta gccgaaacgc tccaacagca cgtcgccgtt ggcgtactcg
     4921 tcgagcacga tgaggtagac gtcgggccgc gggtcgggag cgggaacggg accttcgatc
     4981 gggcgtgcca gctcccgcgc cagcgtgctc ttcgcgatca
//
LOCUS       DASUYN010000064         3729 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_900335, whole genome shotgun sequence.
ACCESSION   DASUYN010000064 DASUYN010000000
VERSION     DASUYN010000064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3729)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3729)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3729
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_900335"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..205
                     /locus_tag="VF061_01325"
     CDS             <1..205
                     /locus_tag="VF061_01325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668165.1"
                     /translation="QSIRGSWDEILLQMKAADREWANGSLNDFMTSLARRGHAETGVI
                     IPTTDAEAFIRGSAEAGVLRIVQ"
     gene            212..2353
                     /locus_tag="VF061_01330"
     CDS             212..2353
                     /locus_tag="VF061_01330"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HEX6668166.1"
                     /translation="MKASDTSRRSYWTSGVRKDVLGNGLTLLVQADHSAPVVAVVTHV
                     KAGFFDEPDRWTGISHVLEHMFFKGTPRRGVGAIARETKGAGGYLNASTTYDHTSYFT
                     VLPASGLETALDIQSDALRNSVIDAGELARELQVIIQEAKRKLDTPSAVAYETMHAVM
                     FDRHRIRRWRIGHEDQLARLTRDDLWAYYRSRYVPERTIVAIVGAVDPDQALALARRT
                     YGGWPGAPGVVDPSPDEPERREVRARTLRGDVSQAELVLGWRVVPPLHPDAPVLDLAA
                     AVLGSGRGSWLYRSLREPGIVTWAAAHNYAPTELGVFSLSAELRPERLEAAVAGAAEA
                     IARLALVGPSDDDLERARTLVRARWARRLESMEGRASALAAAEALEDVGLLDREYARL
                     AEIGPAEVRQSAARYLAPDAVAGVAYLPTGAGKDLTADTLARAFAVSELRPASNRGLP
                     HARSRPPGSARPSAEHGVSVTRLPGADLLVYRKTGVPLVTLGLYVPRLRFDPPHHAGL
                     GSLLVRAAVRGAGDFDAAGYSRTFMKVFGGAEGAAIWHRVGAVLIIISAVYHLFYLTF
                     LAAKKRLPFSMLPVPKDAIDMKDNILFMLGVKKERPRFDRYMYLEKFDYWAVFWGIVM
                     MVGTGFIFWFPAWFSAWAPSWLITAALIIHGEEATLAILFLFTVHFYNVHLKPSIFPM
                     NWAWLNGRISVEMLKHEHPVEYDRMKGKLEE"
     gene            2472..3377
                     /locus_tag="VF061_01335"
     CDS             2472..3377
                     /locus_tag="VF061_01335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HEX6668167.1"
                     /translation="MALSRNAKTLLVGLGVAASLAVVFGFLRFKRFVDEDPRLCATCH
                     RASPEFALWLGGTHKSVACQRCHHATARDGVSMLGAFVAGKKPAGEHAEVEVGSCASC
                     HFSHDPRWPQVGGSRGHRIHHEEHGIACIRCHAASMHGFEPVAAKCAECHPGHAVNLE
                     KMHELHCFACHEFLTNEPGLRPTRHDCMRCHTAQGIHAPMNEHGAMEMSCAACHRPHA
                     SDRQTLAACAECHAPALMAKGGLHAKAGHQRCLDCHTPHLWKPEPDGCLRCHAGAPAH
                     AQGKACLACHEFSGAPLPPLPVSAW"
     gene            3393..>3729
                     /locus_tag="VF061_01340"
     CDS             3393..>3729
                     /locus_tag="VF061_01340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668168.1"
                     /translation="MTLRLKLFVLIAGVIIFAMSGVTAVALWRELVRGQELLAREGAA
                     LASTASSAAAQWVRADGPVPGADQALPAVLDLLVEAHPLDRAWIVDRTGAVLACLSRT
                     GEACPEGIAP"
BASE COUNT          504 a         1400 c         1292 g          533 t
ORIGIN      
        1 ccagagcatc cgggggagct gggacgagat cctgctccag atgaaggcgg ccgaccgcga
       61 atgggccaac ggcagcctga acgacttcat gaccagcctc gcccgccgcg gccacgccga
      121 aaccggcgtc atcatcccca ccacggatgc cgaagcgttc atcaggggca gtgcggaggc
      181 tggagtgctc cggatcgtgc agtagggagg cgtgaaagct tccgacactt cacgccgctc
      241 ctactggact tccggtgtac ggaaggacgt cctggggaac ggcctgaccc tcctggtgca
      301 ggcggaccac tccgcgccgg tggtcgcggt ggtcacccac gtcaaggcgg gcttcttcga
      361 cgagcccgat cgctggaccg gcatctccca cgtcctcgag cacatgttct tcaagggcac
      421 cccgcgccgg ggcgtcgggg ccatcgcccg ggagaccaag ggcgccggcg gctacctcaa
      481 cgccagcacg acctacgatc atacctccta cttcaccgtg ctccccgcct ccggcctgga
      541 gacggcgctc gacatccagt ccgacgccct ccgcaactcg gtcatcgacg ccggcgagct
      601 ggcccgcgag cttcaggtca tcatccagga ggccaagcgc aagctggaca cacccagcgc
      661 ggtcgcgtac gagacgatgc acgcggtgat gttcgaccgc caccgcatcc gtcgctggcg
      721 gatcggccac gaggaccagc tcgcccggct cacccgagac gacctgtggg cgtactatcg
      781 ctcccggtac gtgccggagc gcacgatcgt cgcgatcgtc ggcgcggtgg acccggacca
      841 ggcgctggcg ctcgcacgcc ggacctacgg cgggtggccc ggggccccag gtgtcgtgga
      901 cccctcgccc gacgagccgg agcgccgcga ggtccgcgcc cgcactctcc ggggcgacgt
      961 gagccaggcc gagctggtgc tcggctggcg ggtcgtgcct cccctgcatc cggacgcccc
     1021 ggtcctggac cttgcggccg cggtgctcgg ctcgggacgg ggaagctggc tctaccgctc
     1081 gctccgcgag ccgggaatcg tgacctgggc cgcggcccac aactatgccc cgacggagct
     1141 gggggtgttc agcctcagcg ccgagctgcg cccggagcgc ctcgaggcgg cggtggccgg
     1201 cgcggcggaa gcgatcgcgc ggctcgcact ggtggggccg agcgacgacg acctcgagcg
     1261 cgcccgcacg ctggtgcgcg cccgctgggc ccgccggctg gagtccatgg agggccgcgc
     1321 cagcgcgctg gccgccgccg aggcgctgga agacgtcggc ctgctcgacc gggagtacgc
     1381 gcggctggcg gagatcggcc cggccgaggt gcgccagtcg gcggcgcgct acctggcgcc
     1441 ggacgcggtc gccggggtgg cgtatctccc cacgggtgcc ggcaaggacc tcacggcgga
     1501 caccctcgcc cgggccttcg ccgtcagcga gcttcgcccc gcctcgaacc gcgggttgcc
     1561 gcacgcccgc tcccggcccc cgggctccgc gcgcccgtcc gcggagcacg gcgtcagcgt
     1621 tacccggctg ccgggcgccg acctgctggt gtatcggaag accggcgtgc cgctggtcac
     1681 gctggggctt tacgtccccc gcctccggtt cgacccaccg caccatgcgg ggttgggatc
     1741 cttgctggtg cgcgcggcgg tgcgcggcgc gggcgacttc gacgccgccg gctactcgcg
     1801 cacgttcatg aaggtcttcg gcggcgccga aggggcggcg atctggcacc gcgtcggcgc
     1861 ggtcctcatc atcatctcgg ccgtctacca cctcttctac ctgacgttcc tcgcggcgaa
     1921 gaagcggctg ccgttctcga tgctgccggt gccgaaggac gccatcgaca tgaaggacaa
     1981 catcctcttc atgctcgggg tgaagaagga gcggcccagg ttcgaccggt acatgtacct
     2041 ggagaagttc gactactggg cggtgttctg gggcatcgtg atgatggtcg gcaccgggtt
     2101 catcttctgg ttcccggcgt ggttctcggc ctgggcgccc tcgtggctca tcaccgccgc
     2161 gctcatcatc cacggcgagg aggcgacgct cgcgatcctc ttcctcttca ccgtgcactt
     2221 ctacaacgtg cacctgaagc cctcgatctt cccgatgaac tgggcgtggc tgaacggccg
     2281 gatctcggtg gagatgctga agcacgagca ccccgtggag tacgaccgga tgaagggcaa
     2341 gctcgaggag tagagagcgc tgaaggccag gccctcgagg ggggccgtgc gggcgaccgc
     2401 gcggcccccc ttaccttttc ccgccgcgcc tttcgtcccg gcccgcgcga gcggatacaa
     2461 tcgcgcggcc gatggcgctc tcccgcaacg cgaagacact cctcgtcggg ctcggcgtgg
     2521 ccgcctcgct cgcggtcgtc ttcggcttcc tgcgcttcaa gcgcttcgtg gacgaggacc
     2581 cgcgcctgtg cgccacctgc caccgcgcgt cgccggagtt cgcgctgtgg ctcggcggga
     2641 cgcacaagag cgtcgcctgc cagcgctgcc accacgcgac cgcgcgcgac ggcgtgtcga
     2701 tgctcggcgc gttcgtcgcc ggaaagaagc ccgcgggcga gcacgccgag gtcgaggtcg
     2761 gctcctgcgc gtcctgccac ttctcccacg atccgcgctg gccgcaggtc ggcggctcgc
     2821 gcggccaccg gatccaccac gaggagcacg ggatcgcctg catccgctgc cacgcggcga
     2881 gcatgcacgg cttcgagccg gtggcggcga agtgcgccga gtgccacccc ggccacgcgg
     2941 tgaacctcga gaagatgcac gagctccact gcttcgcgtg ccacgagttc ctcacgaacg
     3001 agccggggct ccgcccgacc cggcacgact gcatgcgctg ccacaccgcg cagggcatcc
     3061 acgcccccat gaacgagcac ggcgcgatgg agatgtcctg cgccgcctgc caccggccgc
     3121 acgcgagcga ccggcagacc ctcgccgcct gcgccgagtg ccacgccccc gcgctcatgg
     3181 ccaagggcgg gctgcacgcg aaggccggcc accagcgctg cctcgactgc cacacgccgc
     3241 acctgtggaa gcccgagccg gacggctgcc tgcgctgcca cgccggcgcc cccgcccacg
     3301 cgcagggaaa ggcctgcctc gcgtgccacg agttctccgg cgcgccgctc cctcccctcc
     3361 ccgtctccgc ctggtgaccc cgtgatggcg ccatgacgct gcggctcaag ctcttcgtcc
     3421 tcatcgcggg ggtgatcatc ttcgcgatgt cgggcgtcac cgcggtggcg ctctggcgcg
     3481 agctcgtgcg cgggcaggag ctcctcgccc gcgagggggc ggcgctcgcc tccaccgcgt
     3541 cgagcgccgc ggcccagtgg gtgcgggccg acgggccggt ccccggcgcc gatcaggccc
     3601 tcccggccgt gctcgacctg ctcgtcgagg cccacccgct cgaccgcgcc tggatcgtgg
     3661 accggaccgg cgcggtgctc gcctgcctgt cgcggaccgg cgaggcgtgc ccggagggga
     3721 tcgcgccgt
//
LOCUS       DASUYN010000065         2523 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1782419, whole genome shotgun sequence.
ACCESSION   DASUYN010000065 DASUYN010000000
VERSION     DASUYN010000065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2523)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2523)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2523
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1782419"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1227)
                     /locus_tag="VF061_01345"
     CDS             complement(<1..1227)
                     /locus_tag="VF061_01345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668169.1"
                     /translation="MTLGRPLFLTGVVLALVAGPTEAQRAPVLRQVRTPHPYYFREML
                     IPQVTTGPGAPAWSPDGRELIYSMGGSLWRQRPEEDEARQVTDGPGYDYQPDWSPDGR
                     RVVYASYRDDAIELRVLDLATGASAPLVSNGAVNIEPRWSPDGSRVAYTSSAHEGLWH
                     VFIVPVSPDGPAGDPVRLTADRDGGLPRYYYHRKDQYFSPTWSPDGRELILLSNRGRI
                     WGSGGFWRVEATRAGGEREIHYEETTWKARPDWSRDGRRVVYSSYLGRQWNQLWLMTS
                     GGGDPLQLTYGEFDATAPRWSPASDRIAYVSNERGNTSLWVLELPAGARREVRIARRR
                     HLAPVGTLRIAVTGAGGAVLPARVSVRGEDGRSHAPADAWHHADDAFDRAERRLEYGY
                     FHSGGSATLRLPAGRYA"
     gene            complement(1224..>2523)
                     /locus_tag="VF061_01350"
     CDS             complement(1224..>2523)
                     /locus_tag="VF061_01350"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HEX6668170.1"
                     /translation="TAAAAGPSSISFWVLAALFFFVPQGLAVSHLSSRYPNEGGIYFW
                     TKRQFGEGHGFLCGWCYWVNNILYYPNLLMSTAVVGTYAFGRGGTGLEGDWSYVLPAT
                     LGALWIAVGLNIVGLRTGRWLQNLGAFGTYLPGFIIVALGVYAMLTRPPATPMTPAAI
                     LPDLGDWSSLNLWASIAFAFAGLELCAVLGDEVKDPKRNLPRSIFIAAPFIAFLYIAG
                     TLSVLWLVPTGEVNIVSGFLQALAAGAADAGIALAWLAPAAAALYVVGNIGGVGAWLT
                     GPARVAFVIGLDRYFPPAFGKVHPRWRTPYVAILTQAVLASLFLVLSVLGRGTTVERA
                     YLVILDTMLLVYFVPYIYLFLCYLADRLRGSAAVASLPGRLKATVIGLSGLALTLFAM
                     FIATVPPGGTEDPWLFRLKVIGGAAGCVLLGGVLFFRARR"
BASE COUNT          418 a          882 c          909 g          314 t
ORIGIN      
        1 ggcgtaacgt cccgccggca gccgcagtgt tgcggagccg ccactgtgga agtacccgta
       61 ctcgaggcgg cgctcggcgc ggtcgaaggc gtcgtcggcg tggtgccagg cgtccgcggg
      121 tgcgtggctg cggccgtcct ccccccgcac cgagacccgc gccggcaaca cggcgcctcc
      181 ggcgccggtc acggcaattc gcagcgtgcc gacgggagcc agatgtcggc gacgcgcgat
      241 ccgcacctcc cgtctcgccc ccgccggcag ctccagcacc cacagcgagg tgttgccgcg
      301 ctcgttgctc acgtacgcga tgcggtcgct ggccggcgac cagcgcggcg cggtggcgtc
      361 gaactccccg tacgtcagct ggaggggatc gccgcccccg gaggtcatca accagagctg
      421 gttccactgg cgaccgagat aggaggagta gaccacccgc cggccgtcgc ggctccagtc
      481 gggacgggcc ttccaggtcg tctcctcgta atggatctcg cgctctcccc cggcccgtgt
      541 ggcctcgacc cgccagaacc ctcccgaccc ccagatcctg ccccggttgg agaggaggat
      601 gagctcacgc ccgtcgggcg accaggtggg cgagaagtac tggtccttgc ggtggtagta
      661 gtagcgcggc agcccgccgt cgcggtcggc tgtgagccgc accggatcac ccgcggggcc
      721 gtccgggctc accggcacga tgaagacgtg ccacaggccc tcgtgcgccg aggaggtgta
      781 cgccacccgg ctcccgtccg gagaccagcg tggctcgatg ttcacggcgc cgttggacac
      841 cagcggggcg gaggcgccgg tcgcaagatc cagcacccgg agctcgatcg cgtcgtcgcg
      901 gtaggaggcg tacaccaccc gtcgcccgtc gggcgaccag tcgggctggt agtcgtaccc
      961 cggtccgtcg gtgacctggc gggcttcgtc ctcctccggc cgctggcgcc agagcgagcc
     1021 gcccatggag tagatcagct cccggccgtc gggcgaccac gccggcgcgc ccgggcccgt
     1081 cgtcacctgc gggatcagca tttcccggaa gtagtaggga tgcggcgtcc ggacctgccg
     1141 cagcaccggc gcccgttgcg cctccgtggg tccggccacg agcgcgagga cgacgcccgt
     1201 caggaacagc ggtcgcccga gagtcaacgc ctggctcgga agaagagcac gccgcccaac
     1261 agcacgcatc ccgccgctcc gccgatgacc ttgagccgga acagccaggg gtcctcggtg
     1321 ccgcccggag gcaccgtggc gatgaacatg gcgaagagcg tcagcgcgag gccgctgagc
     1381 ccgatgaccg tcgccttcag ccgccccgga agcgaggcga cggctgccga tccccgcagc
     1441 cggtcggcga ggtagcacag gaagaggtag atgtagggca cgaagtagac cagcagcatc
     1501 gtgtccagga tcacgaggta ggcccgctcc accgtggtgc cccggccgag cacggagagc
     1561 acgaggaaga gcgacgccag caccgcctgg gtcaggatgg cgacgtaggg cgtgcgccag
     1621 cgcgggtgca ccttgccgaa cgcgggtgga aagtagcgat ccaggccgat gacgaacgcc
     1681 acccgtgccg gcccggtgag ccaggcgccc accccaccga tgttgccgac cacgtagagc
     1741 gcggccgcgg ccggcgcgag ccaggcgagc gcgatgccgg cgtcggcggc cccggcggcg
     1801 agcgcctgga ggaatccgga gacgatgttc acctcgccgg tcggcaccag ccagagcacc
     1861 gacagggtgc cggcgatgta gaggaatgcg atgaacggcg ccgcgatgaa gatcgagcgc
     1921 ggcaggttcc gcttcgggtc cttcacctcg tcgcccagga cggcgcacag ctccaggccc
     1981 gcgaaggcga aggcgatgga agcccagaga ttgagcgacg accagtcgcc caggtcgggc
     2041 aggatggccg cgggtgtcat cggggtggcg ggcggccggg tgagcatcgc gtacactccg
     2101 agcgcgacga tgatgaatcc cggcaggtag gttccgaagg cgcccaggtt ctgcagccac
     2161 cgccccgtgc gcaggcccac gatgttgagc cccaccgcga tccagagcgc gccgagggtc
     2221 gcgggcagca cgtagctcca gtcaccctcc agtccggtgc cgccgcggcc gaacgcgtag
     2281 gtgccgacca cggcggtgga catgaggagg ttcgggtagt acaggatgtt gttgacccag
     2341 taacaccacc cgcagagaaa gccgtgcccc tcgccgaact gccgcttggt ccagaagtag
     2401 atcccgccct cgttggggta ccgggaagac aggtggctca ccgcgagacc ctgagggacg
     2461 aagaagaaga gcgccgcgag cacccagaac gagatcgagc tgggccccgc ggcggcggcg
     2521 gtg
//
LOCUS       DASUYN010000066         3774 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_239829, whole genome shotgun sequence.
ACCESSION   DASUYN010000066 DASUYN010000000
VERSION     DASUYN010000066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3774)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3774)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3774
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_239829"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(28..1233)
                     /locus_tag="VF061_01355"
     CDS             complement(28..1233)
                     /locus_tag="VF061_01355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668171.1"
                     /translation="MKLPRASTVVPMLFYAASGGAFAVANLLLARRLTERDYALLTLV
                     LAMMALGPSLAAAGLDGVAVRGGLRFVAPVALRVWLAAGVVALGLGAAAASYDIGFAG
                     VALIVVAGVTGGATAVAAAEFQRRQRFALSLLLLHAPNYTLLLAALVVTGMGGTKGWL
                     PLLFMAFGFVAAAVYAWRLVLRDPGDSPADPGVPWGEAISLASTNASGSIMTQLDRLI
                     IPYLLPLGNLATYGVLSSVAGSLFRVVQRGVGYGLLPRLRVAGSVAERRRLVADEARL
                     VLVVALAGSALIWVGMPAVEHWLLADKYRFSGALVLATLIAGCAKLLQAFSRAAVTAL
                     ADARELGLVNVSGWVSLAISVIAAAVGAQWGLAGVIYGVGLGWLFRAAFALAVMSRHL
                     RPAEQPVGD"
     gene            complement(1268..3622)
                     /locus_tag="VF061_01360"
     CDS             complement(1268..3622)
                     /locus_tag="VF061_01360"
                     /inference="COORDINATES: protein motif:HMM:NF022481.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2723 domain-containing protein"
                     /protein_id="HEX6668172.1"
                     /translation="MSDLETHRPPYAAGVAVVALVLVIYVLTLAPTVTFWDAGEFIAA
                     ARTLGIPHPPGTPLFVLIAHAWGMLVPIGEFAYRTNLLSALFSASAAGLLFLVVHQSI
                     RGVVEGLPDGRARALRVGGAAAAAFLRAFTFTNWQNSNETEVYTVATFTTAAMAWSAM
                     LWRRRRHTERGQRFLLLIVYLAGISIGNHLLALLAMPGVLLFLVATLRHHPAADAARR
                     RMEWGQVAVVGGVWALLVGTGLGSIGLIAVGAVCFLVAAAYAAAGGAGTFAAAALGLA
                     AVGVTPYLFLYIRSGQNPVINEAAPSTLDALLAVIRRAQYPPRTPFDDPTELHGPDNP
                     GRTLALVGWQLANYFQYFDWQWGRALGDGLRQVLTVLFLTLGLRGLWEQRRSDRATWW
                     LLLGVFLVTGLGLVAYMNFRPGFSLAFHIWPEAEDHEVRERDYFFVVSFIVWGLWAGI
                     GATAFAADLARRTTGRALAPALLLIALVPLFLNWGKASRRHGPDARLAADFAYDLLNS
                     APPYGVLFTYGDNDTFPLWWAQEVAGIRQDVTVVCLALANTDWYMRQLRDNPVRPVDP
                     AQVPALWRDSIPAPPTWPLHGMTDSMIASALNGYLVNDSTEVRLGPVVRALPKGTVLY
                     PNDIVSMSIVQHNAGKRPLVWSVTAGTGFAGLRNYVVQRGLGFELRTTPPDTTDPNLD
                     LRRLAGAPLHLPDTEALVYGTYRYAGLLERGAVGLDPTSASAAASLALPAVQLVYAYE
                     TRGDAERMKRAIASASKLTPNAQLRDALVGLPVPQASDSLDPRE"
BASE COUNT          666 a         1320 c         1378 g          410 t
ORIGIN      
        1 agcggaccag agcgggctcc cgcgagctca gtcgccgacc ggctgctccg ccgggcgcag
       61 atgacgagac atcaccgcga gcgcaaaggc tgcccggaaa agccagccga ggccgacgcc
      121 gtagatcacg ccggccagtc cccactgggc gccgacggcg gcggcgatca ccgagatcgc
      181 gagcgagacc cagcccgaga cgttcaccag cccgagctcg cgcgcgtcgg ccagcgcggt
      241 gaccgcggcc cggctgaagg cctggaggag cttggcgcag cccgcgatga gcgtggcgag
      301 gacgagcgcg ccggagaagc ggtacttgtc cgccagcagc cagtgctcca cggccggcat
      361 ccccacccag atgagggccg agccggcgag cgccacgacc agcaccagcc gcgcctcgtc
      421 cgccacgagc cgcctgcgct ccgccacgct cccggccact cgaagtcgag gcaacaggcc
      481 gtacccgaca ccccgctgca ccacccggaa gagcgacccg gccaccgacg agagcacgcc
      541 gtaggtggcc agattcccca gcggaagcag gtaaggaatg atgagccgat cgagctgggt
      601 catgatggag cccgaagcgt tggtggaggc cagcgagatc gcctcccccc acggcacgcc
      661 ggggtcggcc ggcgagtcgc cggggtcgcg gagcaccagc cgccaggcgt agacggcggc
      721 ggccacgaag ccgaacgcca tgaagagcag cggcagccag cctttcgtcc ctcccatgcc
      781 cgtcaccacc agcgccgcca acaggagagt gtagttcggg gcgtgcagca gcaacaggga
      841 gagcgcgaac cgctgccggc gctggaactc ggcggccgcg accgcggtgg ccccgccggt
      901 gacaccggcc accacgatca gcgccactcc ggcgaagccg atgtcgtagc tcgccgccgc
      961 ggccccgagc cccagggcga cgaccccggc ggcgagccag acccggaggg ccaccggggc
     1021 cacgaagcgc aggcccccgc gcaccgccac gccgtcgagg cccgcagcag ccagcgaagg
     1081 gcccagcgcc atcatcgcga gcaccagggt gagcagcgca tagtcgcgct cagtcagccg
     1141 gcgcgccagc agcaggttcg ccacggcgaa cgcccccccg gacgccgcgt agaacagcat
     1201 cggcaccacg gtcgaggcgc gcggcagctt cacggcgaag atggtggcgg gaccggccgg
     1261 agggggacta ttcccgcggg tcgagactgt cgctcgcctg cggaaccggc aagccgacca
     1321 gcgcatctcg gagctgggcg ttgggcgtca gcttcgaggc ggaggcgatc gcccgcttca
     1381 tgcgctcggc gtcaccccgg gtctcatagg catagaccag ctggaccgcg gggagcgcga
     1441 gactcgctgc ggcactggcg gacgtgggat cgagcccgac cgcgccgcgc tcgagcagcc
     1501 ccgcgtagcg ataggtgccg tagaccaggg cttcggtgtc gggcaggtgc agcggcgcgc
     1561 ccgccagccg gcgaaggtcg aggttcggat cggtggtatc gggaggggtg gtccggagct
     1621 cgaatccgag accccgctgg accacatagt tgcgcagccc ggcgaagccg gtgcccgccg
     1681 tgaccgacca gaccagcggc cgcttgcccg cgttgtgctg gacgatgctc atcgacacga
     1741 tgtcgttggg atagagcacc gtccccttcg gcagggcacg gaccaccggg ccgagccgca
     1801 cctcggttga atcgttcacc aggtatccgt tgagcgccga cgcgatcatc gaatcggtca
     1861 tcccgtgcag cggccaggtg ggcggcgccg gaatggagtc gcgccagagg gccgggacct
     1921 gggccggatc caccggacgc accggattat cgcgcagctg gcgcatgtac cagtcggtat
     1981 tggccagtgc gaggcagacc acggtgacgt cctggcgaat gcccgccacc tcctgcgccc
     2041 accagagcgg gaaggtgtcg ttgtcgccgt aggtgaagag caccccgtag ggcggcgcgc
     2101 tgttgaggag gtcgtaggcg aagtcggccg ccagccgggc gtccggaccg tggcggcgcg
     2161 aggccttgcc ccagttcagg aacaggggga ccagggcgat cagcaggagg gccggcgcga
     2221 gcgcacgtcc cgttgttctc cgcgcgaggt cggcggcgaa ggcggtggca ccgatgccgg
     2281 cccacagccc ccacacgatg aagctgacca cgaagaagta gtcccgctcc cgcacctcgt
     2341 ggtcctcggc ctccggccag atgtggaagg ccaggctgaa cccgggccgg aagttcatgt
     2401 acgccaccag gccgagcccg gtcaccagaa acacgcccag gagcagccac caggtggcgc
     2461 ggtcggagcg gcgctgttcc cagagacccc gaagacccag ggtcaggaag aggacggtga
     2521 gcacctgccg aagcccgtca cccagggccc ggccccactg ccagtcgaag tactggaagt
     2581 aattggccag ctgccaaccc accagcgcga gggtccggcc gggattgtcg ggaccgtgca
     2641 gctcggtggg atcgtcgaac ggggtgcgcg gcgggtactg cgcccggcgg atcaccgcga
     2701 gcagcgcgtc gagcgtggac ggcgcggcct cgttgatgac cgggttctgc cccgaccgga
     2761 tgtaaaggaa gaggtagggc gtgaccccga ccgcggcgag gcccagcgcc gccgcggcaa
     2821 aggtccccgc cccgcccgcg gcggcgtagg ccgccgcgac caggaagcag accgccccca
     2881 cggcgatgag cccgatgctg ccgagaccgg tgcccacgag cagcgcccag acgcccccaa
     2941 ccaccgccac ctgaccccac tccatccgcc gccgcgcggc gtcggcggcg ggatggtgcc
     3001 ggagggtggc caccagaaac agcagcaccc cgggcatggc gagcagcgcg agcaggtgat
     3061 tcccgatcga gatgcccgcg agatagacga tcaggaggag aaaacgctgg cctcgctcgg
     3121 tatggcggcg ccggcgccag agcatcgccg accacgccat cgcggccgtg gtgaacgtgg
     3181 cgacggtgta gacctcggtc tcgttcgagt tctgccagtt ggtgaaggtg aacgcgcgga
     3241 gaaaggcggc cgccgcggcg ccgccgaccc ggagggcacg ggcacggccg tccggcagac
     3301 cttcgaccac gccgcggatg gattggtgca ccacgaggaa gaggagtccg gcggccgagg
     3361 cgctgaacaa ggcgctgagc agattggtgc gataggcgaa ctcgccgatg ggcaccagca
     3421 tgccccaggc gtgcgcgatc aggacgaaca gcggcgtgcc cggcggatga ggaatgccca
     3481 gcgtccgggc cgcggcgatg aactcgccgg catcccagaa cgtgaccgtg ggcgcgagcg
     3541 tcaggacgta gatgacgagc accagcgcca ccacggccac gccggcggcg tagggtggac
     3601 gatgtgtctc gaggtcgctc acgcggcggg tcggcgtttc atggggtcgg aatgtaggga
     3661 gacagagccg tcggttgaag ctgggggttc accgagggcc gccgcgagca gcgacgcggg
     3721 ggcccctact gcccgacgac ggccgccgcg accgcgagcg cgtcccgcgc cgcc
//
LOCUS       DASUYN010000067         3444 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1121545, whole genome shotgun sequence.
ACCESSION   DASUYN010000067 DASUYN010000000
VERSION     DASUYN010000067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3444)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3444)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3444
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1121545"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..706
                     /locus_tag="VF061_01365"
     CDS             <1..706
                     /locus_tag="VF061_01365"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX6668173.1"
                     /translation="WVLQDVSFAVEPGRSLAVVGPTGSGKSTLVDMIVRAHDPSRGVV
                     RLDGVDIRRLDLAELRQAVGFVPQETFLFGETLRENVLLGAPDDGRLERVAEVSQLAE
                     ALPSLPNGFDTLLGERGINLSGGQKQRTAIARALAQDPPVFVLDDALSAVDAQTEARI
                     LSALRGALSGRTSIIVSHRLAAVRDADWILVLDDGRIVEQGVHPDLIARGGRYWELLR
                     RQQLEEELEEESVGGG"
     gene            696..1328
                     /locus_tag="VF061_01370"
     CDS             696..1328
                     /locus_tag="VF061_01370"
                     /inference="COORDINATES: protein motif:HMM:NF012415.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HEX6668174.1"
                     /translation="MAGSTLLFWLCAGVMGLGTEAPYHPAWDRLALDIHHETNLVRRH
                     PAAYARHLEALLPRFEGKVLQRPGRPMLRTEEGPAAVREAIAALRGQKPLPALGWSKG
                     LAGAAADHVRDQGPIGGLEHRGTDGSDPARRAERRGRWVAAMAENIAYGENPARQVVM
                     QLLVDDGVPDRGHRHNILDPRWQVEGVACGPHRDYRQICVMDYAVRYEER"
     gene            complement(1420..2148)
                     /locus_tag="VF061_01375"
     CDS             complement(1420..2148)
                     /locus_tag="VF061_01375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcdA"
                     /protein_id="HEX6668175.1"
                     /translation="MSEPAALGIAVAFAAGLLSFLSPCVLPLVPSYVGFLTGMTLGEM
                     EGRRRVALLHALLFVAGFSLVFILLGASATALGRALNYYQVWLQRIGGLLIIAFGLVC
                     LGLFTPGWLVQERRLHLEQKPVGFLGSALVGMAFGAGWTPCIGPVLGAILGLAATSAD
                     LSRGMLLLAVYSAGLAVPFLIAAVAVERFLEWFQRFRKYLPWVMRVSGALLVVVGVLL
                     VSGEFTRLAGWLQTLTPEVLRGRL"
     gene            complement(2145..2630)
                     /locus_tag="VF061_01380"
     CDS             complement(2145..2630)
                     /locus_tag="VF061_01380"
                     /inference="COORDINATES: protein motif:HMM:NF013629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HEX6668176.1"
                     /translation="MSPLARAEGAALLERFRRYLRDHHQPVTRQRDLVAQIVFLSDDH
                     PSVDAILRRLRERGEAVGTATVYRTLEVLVESGLVRAHDFGEGFKRYEPMPAQTHHEH
                     LICERCGNVVEFQNERLERMLPIIADEHAFQHSQHRVEIYGVCRDCRRRELVVTGVEA
                     R"
     gene            complement(2614..3000)
                     /locus_tag="VF061_01385"
     CDS             complement(2614..3000)
                     /locus_tag="VF061_01385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668177.1"
                     /translation="MTAAPDSGWFRLAGAVAEVVPPAEVDGVWIFSPLRREGREWGTA
                     VLSRVDGDRRRIYTARYMLAVKGKERGKFEASVEEVGSGPLTALAQLLQDTRKRIDDE
                     QPPTPVAPETWFPETKPAEAGDVPAR"
     gene            complement(2997..>3444)
                     /locus_tag="VF061_01390"
     CDS             complement(2997..>3444)
                     /locus_tag="VF061_01390"
                     /inference="COORDINATES: protein motif:HMM:NF044507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668178.1"
                     /translation="INKVRAAGSIEGAVGAGLIKTGIMHALVTHGVPYVLAGSIRDDG
                     PLPGVYSDTLQAQDAMREHTVKATGAVFVATALHAIAVGNMLPAFYLCDGAPSPLMTI
                     CVDQTEFVVNKLKDRGTHQAYGVVTNAQDFMHVLRFYTERWEQTSP"
BASE COUNT          548 a         1216 c         1218 g          462 t
ORIGIN      
        1 ctgggtgctc caggatgtga gcttcgccgt cgagcccgga cgctccctcg ccgtcgttgg
       61 ccccaccggg tccggcaagt ccacgctggt ggacatgatc gtccgcgccc acgacccgag
      121 ccggggcgtg gtgcggctcg acggcgtgga catccgccga ctcgacctgg cggagctgcg
      181 tcaggcggtc ggcttcgtgc cccaggagac cttcctcttc ggggaaaccc tgagggagaa
      241 cgtcctgctg ggcgcgcccg acgacggcag gctggagcgg gtggcggagg tgagccagct
      301 cgcggaagcg ctgccttccc ttccgaacgg tttcgacacg ctgttgggag agcgcgggat
      361 caatctctcg ggcgggcaga agcagcgcac ggcgatcgcc cgcgcactgg cgcaggaccc
      421 accggtgttc gtgctcgacg acgcgctcag cgcggtggac gcccagaccg aggcccgaat
      481 tctctccgcc ctgcgggggg ccctgagcgg ccgcaccagc atcatcgtct cccaccggct
      541 cgccgcggtt cgggacgcag actggatcct ggtgctggac gacggccgga tcgtggagca
      601 gggcgtgcac cccgatctca tcgcccgcgg tggccgctac tgggagctgc tccggcggca
      661 gcagctggag gaggagctgg aggaggagag cgtgggtggc gggtagcact ctgctgttct
      721 ggttatgcgc aggggtgatg gggctgggca ccgaagcccc atatcatcca gcctgggacc
      781 ggctcgccct ggacatccac cacgagacca acctggtccg ccgccacccg gcggcgtacg
      841 cgcgccacct cgaggctctg cttccccgct tcgagggcaa ggtgctgcag cgcccggggc
      901 gcccaatgct ccgcaccgag gaaggccccg ccgcggtacg cgaagcgatc gccgccctcc
      961 gggggcagaa gccgctgccc gcgctcggct ggtcgaaagg cctggcggga gcggcggcgg
     1021 accacgtgag ggaccagggg ccgatcggag ggctggagca tcgcggcacc gacgggagcg
     1081 accccgcgcg ccgcgccgag cgccggggcc ggtgggtcgc cgcgatggcg gagaacatcg
     1141 cctacggcga gaaccccgcc cggcaggtgg tgatgcagct gctggtggac gacggcgtgc
     1201 cggaccgcgg gcatcgccac aacattctgg acccgcggtg gcaagtcgaa ggcgtggcct
     1261 gcggaccgca ccgggactac cggcagatct gcgtgatgga ttacgcggtc aggtatgagg
     1321 agcgatgaga tcggaagtgt cgaatgtcac cctgaacgaa gtgaagggga ccattcgtgc
     1381 atgggcccct tcgctgcgct cagggtgaca caacgtgggc tacagccttc ccctcaggac
     1441 ctccggcgtc agcgtctgca gccatcccgc cagccgggtg aactcgccgg agaccagcag
     1501 cacgcccacc acgacgagca gcgcgccgct cacccgcatg acccagggca agtacttccg
     1561 gaaccgctga aaccactcga ggaaccgctc gaccgccacg gccgcgatga ggaacggcac
     1621 ggccaggccc gcggaataga ccgcgagcag gagcatgccg cggctgaggt ccgccgaggt
     1681 ggccgccagg ccgaggatgg cgccgaggac gggaccgatg cagggcgtcc accccgcccc
     1741 gaatgccatg ccgaccaggg cggagccgag aaaacccacc ggcttctgct ccaggtgcag
     1801 ccgccgctcc tgcaccagcc agccgggcgt gaagaggccg aggcagacga gcccgaaggc
     1861 gatgatgagc aggccgccga tgcgctggag ccagacctgg tagtagttga gcgcccgtcc
     1921 cagcgccgtc gcgctggcgc cgagcaggat gaagaccagc gagaagcccg ccacgaacag
     1981 cagcgcgtgc agcagcgcga cccgtcgccg gccctccatc tcccccagcg tcatcccggt
     2041 caggaagccg acgtacgagg gcaccagcgg cagcacgcag ggcgagagga agctcagcag
     2101 ccccgccgcg aacgccaccg cgatccccag cgccgcgggc tcgctcatcg ggcctccacg
     2161 ccggtcacca ccagctcccg ccgacggcag tcccggcaga cgccgtagat ctccacccgg
     2221 tgctgggagt gctggaaggc gtgttcgtcg gcgatgatcg ggagcatccg ctccagccgc
     2281 tcgttctgga actcgaccac gttgccgcac cgctcgcaga tcaggtgctc gtggtgggtc
     2341 tgggccggca tcggctcgta gcgcttgaag ccctcgccga agtcgtgggc ccgcaccagc
     2401 ccgctctcca ccagcacctc gagggtgcgg tagaccgtgg cggtacccac cgcctcgccc
     2461 cgctctcgca ggcgtctgag gatggcgtcc accgacgggt ggtcgtccga gaggaagacg
     2521 atctgggcca cgagatcgcg ctggcgcgtg accggctggt ggtggtcgcg gaggtaccgg
     2581 cggaaccgtt cgaggagcgc ggccccctcc gccctagcga gcggggacat cgccggcctc
     2641 ggcgggtttc gtctcgggga accacgtctc gggggccacc ggcgtgggag gctgctcgtc
     2701 gtcgatgcgc ttgcgagtgt cctggagcaa ctgcgccagc gcggtgaggg gaccgctgcc
     2761 gacctcctcc accgacgcct cgaacttccc gcgctccttg cccttgacgg cgagcatgta
     2821 gcgcgccgtg tagatccgcc gacgatcgcc gtccacccgg gagaggaccg ccgtgcccca
     2881 ctccctgccc tcccgccgca acgggctgaa gatccagacc ccgtccacct ccgcgggcgg
     2941 caccacctcg gcgaccgcgc cggcgagccg gaaccaaccg gagtcgggcg cggcggtcat
     3001 ggggaggtct gctcccagcg ctcggtatag aaccggagca cgtgcatgaa gtcctgcgcg
     3061 ttggtcacca cgccataggc ctggtgggtg ccgcgatcct tcagcttgtt caccacgaac
     3121 tcggtctggt ctacgcagat cgtcatgagc ggggacggcg cgccgtcgca gagatagaac
     3181 gccggcagca tgttgcccac cgcgatggcg tgcagcgcgg tggccacgaa cacggcaccc
     3241 gtcgccttga cggtatgctc ccgcatggcg tcctgggcct ggagcgtgtc gctgtagacg
     3301 ccgggcagcg gcccgtcgtc ccggatcgag ccggcgagca cgtacggcac cccgtgggtg
     3361 accagcgcat gcatgatgcc ggtcttgatc agcccggccc cgaccgcgcc ctcgatggat
     3421 cccgccgcgc gcaccttgtt gatg
//
LOCUS       DASUYN010000068         3459 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1341803, whole genome shotgun sequence.
ACCESSION   DASUYN010000068 DASUYN010000000
VERSION     DASUYN010000068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3459)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3459)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3459
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1341803"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..936
                     /locus_tag="VF061_01395"
     CDS             <1..936
                     /locus_tag="VF061_01395"
                     /inference="COORDINATES: protein motif:HMM:NF022588.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2911 domain-containing protein"
                     /protein_id="HEX6668179.1"
                     /translation="MELQVIPLLEGPGAPRVSRGVLHFRGDTAEVLLTIDDSTRSLKV
                     LARPGSMPLAAFSHALVEQAILRASRLGLDSVAFDWVGMGAPVAYPAYVLRRGDGAIA
                     VGFFDAPAVARVDSNGRMLSLDGRATTAKVEVQRVNAPDLERFARTFAAAEKAHGPVG
                     QLSPRDTMWARLGSARVMVDYGRPSRRGRVVFGQVVPWNRVWRTGANAATQFSTDAPI
                     TIGGRPIPAGRYSLWSVPRRDGATLIVNARTDQWGTHYDPSLDVARVEMTREALPQPV
                     EQFTIGIDPAGDGGVLRLTWDRTSYLVNVSDSDQP"
     gene            933..1859
                     /locus_tag="VF061_01400"
     CDS             933..1859
                     /locus_tag="VF061_01400"
                     /inference="COORDINATES: protein motif:HMM:TIGR00654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhzF family phenazine biosynthesis protein"
                     /protein_id="HEX6668180.1"
                     /translation="MTTGMRFFTADVFTDRMFGGNQLAVFPEASGLDAAVMQAIAREL
                     NLSETVFVFPTTDPSRSRRLRIFTPGSELPFAGHPTIGTAFVLASIGDIPVGPSGAAI
                     VFEEGVGPVPVAIRVENGRPGYCELTAARLPEEGPPPPPLEEIASALALRPEELRSDG
                     LSPRGVTCGVPYLFVPLRDEAALARARIDHVAWERSIAQWWAPAVFLFVETAGRGGVD
                     FRARMFAPGVGIPEDPATGSAAAAMAGYLASRDGPEAGTLRWVIEQGVEMGRPSRLHV
                     SCDRSAGRVSAVRVGGSSVMVAEGHLAVPTQR"
     gene            complement(1943..>3459)
                     /locus_tag="VF061_01405"
     CDS             complement(1943..>3459)
                     /locus_tag="VF061_01405"
                     /inference="COORDINATES: protein motif:HMM:TIGR00368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HEX6668181.1"
                     /translation="AVLGIDAFPVEVEVDISNGMPSFSTVGLPNGAVKEGRERVSAAL
                     ANAGFEFPLRRITVNLAPADIRKDGSALDLPIALGLLVASGQLPEANLKDTMVLGEVG
                     LEGDLRPIRGALSVALAARTAGCSGLLLPADNLSEAGVVQDLEVRGASSLVEVCAHLT
                     GARPIAAIRASVNSLMSARVPDQVDFADVRGQAAAKRALEVAAAGGHNILLIGPPGAG
                     KTMLARRFPTILPSLTLGEALETTRIHSVAGLLGAGQALCTVRPFRAPHHTVSDAGLI
                     GGGSSPRPGEVSLAHGGVLFLDELPEFRRNVLEVLRQPLEDGAVTLSRAALSLSFPAR
                     FMLVAAMNPCPCGYQGDPVHPCRCAPPEVERYRSRISGPLLDRIDIHLEVPAVPYHDL
                     TAARAEDSSAAIRCRVERAREAQRHRFSDRPGVHANAQMAARDLRRHCPLSGPVETLL
                     REAVTRLGLSARAYHRVLKIARTIADLDRSDDVGPTHVSEAIQYRSLDRRRAAA"
BASE COUNT          498 a         1170 c         1276 g          515 t
ORIGIN      
        1 atggagctgc aggtgatccc gctgctggaa gggccggggg cgcctcgggt gagccggggc
       61 gtcctgcact tccggggcga caccgcggag gtcctgctca ccatcgacga cagtacccgg
      121 agcctcaagg tgctggcccg gcccgggtcg atgccgctcg ccgccttctc ccacgcgctc
      181 gtcgaacagg cgatcctgcg cgcgtcgcgg ctggggctcg acagcgtcgc cttcgactgg
      241 gtaggaatgg gagcgccggt agcgtatccg gcctacgtgc tccggcgggg tgacggtgcc
      301 atcgccgtcg gcttcttcga cgcgcccgcc gtggccaggg tggactccaa cggtcggatg
      361 ctctcgctcg acgggcgggc gaccacagcg aaggtggaag tccagcgggt gaacgcgccc
      421 gatctcgagc gcttcgcccg caccttcgct gcggcggaga aggcgcacgg gccggtggga
      481 cagctctcgc cccgggatac gatgtgggcc cggctcggct cggcgcgagt gatggtggac
      541 tacggccggc cgagtcgccg tggccgggtg gtgttcgggc aggtggtgcc ctggaaccgg
      601 gtgtggcgca ccggtgccaa tgccgctact cagttcagta ccgacgcgcc gatcacgatc
      661 ggcgggcgcc cgatccccgc cggccgatac agtctctggt ccgtgccccg gcgggacggc
      721 gccaccctga tcgtgaacgc ccgaacggat cagtggggca cgcactacga tccgtccctc
      781 gacgtggccc gcgtggagat gacccgcgag gcgctgccgc agccggtgga gcagttcacc
      841 atcggcatcg atccggccgg ggacggtggc gtgctgcggc tgacctggga ccggaccagc
      901 tacctcgtga acgtctccga cagcgatcag ccatgactac tggcatgcgg ttcttcaccg
      961 ccgacgtctt caccgaccgg atgttcggag gcaaccagct cgccgtcttt cccgaggcga
     1021 gcgggctgga cgctgccgtg atgcaggcga tcgcgcgaga gctcaacctc tcggagacgg
     1081 tgttcgtctt ccccaccacg gatccctccc gtagccgacg gctccgcatc ttcacccccg
     1141 gctccgagct gccgttcgcc ggccatccga cgatcggcac cgccttcgtg ctggcgagca
     1201 tcggcgacat cccggtcggc ccctcgggcg ccgcgatcgt tttcgaggag ggagtcggcc
     1261 cggtgccggt ggcgatccgg gtcgagaatg gccggccggg gtactgcgag ctcacggcgg
     1321 cgcggctgcc cgaggaggga ccgcccccgc caccgctgga ggagatcgcc tccgcgcttg
     1381 cgctccggcc ggaggagctg aggtccgacg gcctgtcgcc ccggggcgtg acgtgcggcg
     1441 tcccctacct cttcgtgccg ctgcgtgacg aggcggccct ggctcgggcg cgcatcgatc
     1501 atgtggcctg ggagcggtcg attgcgcagt ggtgggcgcc cgccgtcttc ctcttcgtgg
     1561 agacggccgg cagaggcggg gtcgacttcc gtgcccggat gttcgcgccc ggcgtgggca
     1621 ttccggagga tccggcgacc ggctccgccg ccgccgcgat ggcgggctac ctggcctcac
     1681 gggatggccc ggaggccgga acccttcgct gggtgatcga gcagggcgtg gagatgggcc
     1741 ggccgagccg cctccacgtg agctgcgatc ggtcggctgg gcgtgtctcg gcggttcgag
     1801 tcgggggctc gtccgtgatg gtggcggagg gccacctggc ggtcccgaca cagcgctgac
     1861 acgtccggcg agacggttgt gcccgacggc ccgatgatgc agattcctgc agttgcgtcc
     1921 ccctcgcatc cataactgct cgctacgccg ccgcccttcg ccgatccagg cttcgatact
     1981 ggatggcttc gctgacgtga gtcggcccga cgtcgtccga tcggtcgagg tcggcgatcg
     2041 tgcgcgcgat cttgagcacg cggtggtagg cgcgggcgga gaggcccagc cgggtgacgg
     2101 cctcgcggag gagggtctcg accggaccgc tcaaggggca atggcgccgc agatcgcgcg
     2161 cagccatctg agcattggca tggacgcccg gtcgatcgga gaagcggtgc cgctgggcct
     2221 cgcgggcccg ctccacccgg caccggatcg cggcgcttga atcctcggcg cgggcggccg
     2281 tgaggtcatg atagggaacc gcgggcacct cgaggtgaat gtcgatccgg tccagcagcg
     2341 ggccggagat gcgtgaccgg tagcgctcga cctccggcgg cgcgcagcgg cacgggtgga
     2401 ccgggtcgcc ctggtagccg cagggacagg ggttcatggc ggcgaccagc atgaatcgag
     2461 cggggaagga aaggctgagc gccgcgcggc tcaaggtgac ggcgccgtcc tccaagggtt
     2521 gtcgcagcac ctcgagcacg ttccgccgga actccggcag ctcgtcgagg aaaaggactc
     2581 ccccgtgcgc gagactgacc tcgcccggcc gcggagacga gccgccgccg atcagcccgg
     2641 catcactgac ggtgtgatgt ggcgcccgga atggccggac cgtgcagagg gcctggccgg
     2701 cgcccagcaa ccccgcaacg ctgtggatgc gggtggtttc cagagcctcg cccagcgtca
     2761 gcgaaggcag gatggtgggg aaccggcggg cgagcatggt cttgcccgcc ccgggcggac
     2821 cgatcaggag gatgttgtgt cccccggccg cggccacctc gagagcacgc tttgccgcgg
     2881 cctggccgcg gacatcggcg aagtccacct ggtccggaac ccgggcggac atgagggaat
     2941 tcacactggc gcggatcgca gcgatgggac gggcacccgt gaggtgggcg cagacctcca
     3001 ccagactgct agcgccccgg acttccaggt cctgaacgac accggcctcg gacaggttgt
     3061 ccgcagggag gagcaatccg ctgcatcctg cggtacgggc agcgagggcg acggagaggg
     3121 caccccggat ggggcgcagg tccccctcca ggcccacttc tcccaagacc atggtatcct
     3181 taaggttagc ctcgggaagc tggccgctgg ccaccagcag gcccagcgcg atcggcagat
     3241 ccagcgcgga accatccttg cgtatatccg cgggagccag gttcacagtg atgcgccgca
     3301 gggggaactc gaagccggca ttggcgaggg cggcggagac tcgctcccgg ccctccttga
     3361 cggccccgtt cggcaggccg acggtcgaga aggacggcat gccgttgctg atgtccactt
     3421 cgacttcgac cgggaacgcg tcgataccga ggacggcgg
//
LOCUS       DASUYN010000069         3447 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1783014, whole genome shotgun sequence.
ACCESSION   DASUYN010000069 DASUYN010000000
VERSION     DASUYN010000069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3447)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3447)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3447
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1783014"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..368)
                     /locus_tag="VF061_01410"
     CDS             complement(<1..368)
                     /locus_tag="VF061_01410"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEX6668182.1"
                     /translation="MSRLATALLAAALAAAIGIAALSATQQSASMFRGGAAHTGVYPS
                     APLRRFGGLQWRVQTGGMVQSSAALQEGVLYIGSGDGLLYALDATTGAQRWRFRTGRA
                     VSSTPAVAGGLVFVGSRDNT"
     gene            544..1551
                     /locus_tag="VF061_01415"
     CDS             544..1551
                     /locus_tag="VF061_01415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HEX6668183.1"
                     /translation="MTSIPERSPGHPLPSAEIEEHARVTDELMEELGRVIVGQRTMLE
                     RLLIGLLADGHVLLEGVPGLAKTLAVRTLASTIAAGFHRIQFTPDLLPADLIGTMIYN
                     QRTGDFSVQQGPIFTNLLLADEINRAPAKVQSALLEAMQEKQVTIGGRTFPLPELFLV
                     LATQNPIEHEGTYPLPEAQVDRFMFKLVVTYPERREEREVLDRMTTGDEPTARRVLDP
                     ERILRSRRLVHGIYADDRIKEYVLDLVAATRRPADAGLAALAPLIEFGASPRAAIFLL
                     RAAKAHAFLQGRPYVTPDDIKALGLDVLRHRVILTYRADAEGMGADEVLHRILEAVPV
                     P"
     gene            1548..2429
                     /locus_tag="VF061_01420"
     CDS             1548..2429
                     /locus_tag="VF061_01420"
                     /inference="COORDINATES: protein motif:HMM:NF024909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HEX6668184.1"
                     /translation="MSPEEVTREVRRLEITTRHLVRDIMAGEYSSAFRGRGVEFAEVR
                     EYQPGDDIRTIDWNVTARLGSAYVKRYLEERELTVLFVADQSASARFGSVRRTKGDLT
                     TEVCAVLALAAARNNDRVGAVFATDRVEHYVAPRKGRRQALRVISDLLAFEPERGGTD
                     LGAALAYLEPMLRRRAVIFLLSDFLGSGYEAPLGRLARRHDLIGIQVVDPRERDLPDV
                     GLVTLWDAESGAWRVVDTADHRLRERFRRRAAEFDERLERTLLESGADLLRLETGSSY
                     AEPLLAFFRRRESRLWR"
     gene            2426..3382
                     /locus_tag="VF061_01425"
     CDS             2426..3382
                     /locus_tag="VF061_01425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668185.1"
                     /translation="MTTVRCLLFAGLLQASPAQAQLDHGRFFTATAEPAKVAVGDSVT
                     IRFRLIINERDLLTDTVPRPVGELPPGVRLLSAERLVRGADRAFTGSAVLAFYRPGKR
                     EIPRFGLPWVQVVTGHRGVVSHDPTEIEVTSVLPGGNPSLRDIREPAAPPSLAPLRIL
                     LGAGGVAAIGWLVTRRRRRRPVPAPVPAAPPPPAPPDPYARTVARLNAIEAERWATRG
                     DVERHYEAVAEALREYLEAAEGIPAPERTTTELLWSLPPRLAEGGLRRRVLEVLGEAD
                     LVKFARQRPAAAEATGYTAAARDLLDRWHRAARTAEELDAVR"
BASE COUNT          452 a         1263 c         1256 g          476 t
ORIGIN      
        1 aaggtgttgt cgcggctgcc gacgaacacg aggccgccgg ccaccgcggg ggtggaggac
       61 accgcgcggc cggtgcggaa ccgccaccgt tgcgccccgg tggtcgcgtc gagtgcgtag
      121 agcaggccgt ccccgctccc gatgtacagc acgccctcct gcagcgcggc ggaggactgg
      181 accatgccgc cggtctgaac ccgccactgg aggccgccga accggcggag cggcgcggat
      241 gggtagaccc cggtgtgggc cgcgcccccg cggaacatgg aggcgctctg ctgggtggcg
      301 gacagcgcgg cgatgccgat ggcggccgcg agcgcagcgg cgaggagcgc ggtggcgagc
      361 ctggacatgg ttcctcggaa cgggtgggac cgttctcccg acgcggaggt ggggtggccg
      421 gtgtcggcgc tcgccgtgcg gttggtccgc tgagctgatg gccggcgaca gacttgaccc
      481 ctgccatact gcaccctcct cccgccttac cgccttaccg ccttaccgcc ttagagtccc
      541 ccgatgacct ccattcccga acgctctccg gggcatccgc tgcccagcgc ggagatcgag
      601 gagcacgccc gggtgaccga cgagctgatg gaagagctcg gccgggtcat cgtcggccag
      661 cggacgatgc tggagcggct gctgatcggc ctcctggccg acggccacgt gctgctcgag
      721 ggcgtgcccg gcctggccaa gacgctggcc gtgcgcaccc tcgcctcgac catcgccgcc
      781 ggcttccacc ggatccagtt cacgccggac ctgctcccgg ccgacctgat cggcaccatg
      841 atctacaacc agcgcaccgg ggacttctcg gtgcagcagg ggccgatctt caccaacctg
      901 ctgctcgccg acgagatcaa ccgcgcgccg gccaaggtcc agagcgcact gctcgaggcg
      961 atgcaggaga agcaggtcac catcggcggg cggaccttcc cgctgccgga gctcttcctg
     1021 gtgctggcga cccagaaccc gatcgagcac gagggcacct atccgctgcc cgaggcgcag
     1081 gtggaccggt tcatgttcaa gctggtcgtc acctaccccg agcggcgcga ggagcgggaa
     1141 gtactggacc ggatgaccac cggggacgag ccgaccgccc gccgagtgct cgatcccgag
     1201 cggatcctcc gatcccggcg tctggtgcac gggatctacg ccgacgaccg gatcaaggag
     1261 tacgtgctcg acctggtggc cgcgacccgc cggccggcgg acgccgggct cgccgccctc
     1321 gcgccgctga tcgagttcgg cgcctcgccc cgggccgcca tcttcctcct ccgggccgcg
     1381 aaggcccacg ccttcctgca gggccgtccc tacgtcacgc cggacgacat caaggcgctc
     1441 ggcctggacg tgctgcgcca ccgggtgatc ctcacctacc gcgccgacgc cgagggcatg
     1501 ggcgcggacg aggtgctgca ccggattctc gaggcggtac cggtgccatg agtccggagg
     1561 aggtcacgcg cgaggtgcgg cgcctggaga tcaccacccg ccacctcgtg cgcgacatca
     1621 tggccgggga gtactccagc gccttccgcg gccggggggt ggagttcgcc gaggtgcgcg
     1681 aataccagcc cggcgacgac atccgcacca tcgactggaa cgtcaccgcg cggctcggct
     1741 cggcctacgt caagcgctac ctcgaggagc gcgagctcac cgtgctcttc gtggccgacc
     1801 agagcgcctc cgcccgcttc ggcagcgtcc gccggaccaa gggcgacctc accacggagg
     1861 tgtgcgccgt gctcgcgctc gcggccgcac gcaacaacga ccgggtgggc gcggtgttcg
     1921 ccaccgaccg ggtggagcac tacgtcgcgc cccgcaaggg tcgccggcag gcgctccggg
     1981 tcatcagcga cctcctcgcc ttcgagccgg agcggggcgg caccgacctc ggcgcggcgc
     2041 tcgcgtacct ggagccgatg ctccgccgcc gcgccgtcat cttcctcctg tcggacttcc
     2101 tgggctcggg ttacgaggcg ccgctgggcc ggctggcccg gcgacacgac ctgatcggta
     2161 tccaggtggt ggatccgagg gagcgggacc tgccggacgt cgggctggtg acgctgtggg
     2221 acgcggagag cggcgcctgg cgggtggtgg atacggcgga ccaccggttg cgggagcggt
     2281 ttcgccgccg cgcggcggag ttcgacgagc ggctggagcg gaccctgctg gagtcgggag
     2341 cggacctgct gcgcctcgag acgggctcct cctatgccga gcccctgctg gcgttcttcc
     2401 gccgcaggga gagccggctg tggaggtgac gacggtgcgg tgcctgctct tcgccggctt
     2461 gctccaggcc tccccggccc aggcccagct cgaccacggg cgcttcttca ccgcgaccgc
     2521 ggagcccgcg aaggtcgcgg tcggcgactc ggtcaccatt cgcttccgcc ttatcatcaa
     2581 cgagcgcgac ctgctgaccg acaccgtccc ccggccggtg ggcgagctgc cgccgggggt
     2641 gcggctgctc tccgccgagc ggctggtgcg gggagccgac cgggcgttca ccggcagcgc
     2701 ggtgctcgcg ttctaccgcc ccggcaagcg ggagatcccc aggttcgggc tgccgtgggt
     2761 gcaggtggtg accggccatc gcggcgtggt gtcccacgat ccgaccgaga tcgaggtcac
     2821 ctccgtgctc cccggcggca atccgtcgtt gcgcgacatc cgggagcccg ccgcgccgcc
     2881 gagcctggca ccgctcagga tcctgctcgg cgcgggcggc gtggcggcga tcgggtggct
     2941 ggtgacgcgg cgcaggcgtc ggcggccggt gcccgccccg gtgccggccg cgccgcctcc
     3001 gccagcgccg cccgacccct acgcccggac cgtggcccgg ctgaacgcga tcgaggccga
     3061 gcgctgggcc acgcgcggcg acgtcgagcg gcactacgag gcggtggcgg aggcgctccg
     3121 ggagtacctc gaggccgcgg aggggattcc cgcgcccgag cggaccacga ccgagctgct
     3181 ctggtcgctc ccgccgcgcc tggcggaggg agggctccgc cggcgggtgc tggaagtact
     3241 gggcgaagcc gacctggtga agttcgcccg gcaacgacct gcggcggcgg aggcgaccgg
     3301 ctacaccgcc gcggcgcgcg acctgctcga ccgctggcat cgtgcagcgc ggaccgcgga
     3361 ggagctggat gcggttcgct gacccctggc tcctcctcct gctcgcaatt ccggcggccc
     3421 tcgcgctccg cctggtcctt cgtcggc
//
LOCUS       DASUYN010000070         2166 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1562856, whole genome shotgun sequence.
ACCESSION   DASUYN010000070 DASUYN010000000
VERSION     DASUYN010000070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2166)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2166)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2166
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1562856"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..586
                     /locus_tag="VF061_01430"
     CDS             <1..586
                     /locus_tag="VF061_01430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668186.1"
                     /translation="VNLLALAIALKDQLPAESEQERAAHDKLNTFTTDGFGYFLEQTT
                     RPQTIGYSLLDSPLGLAAWLLDHDTDAYYKISKAFVDGEPVGNLTRDTILDNITLYWL
                     TGSGASAARWYWEFGRFLAVAMASGQPPPPVQVPVGFTTFPGEIWAAPRSWVEAVYPG
                     LAYFNEVDRGGHFAAWEEPELFSAEVRAAFRSLR"
     gene            complement(701..1102)
                     /locus_tag="VF061_01435"
     CDS             complement(701..1102)
                     /locus_tag="VF061_01435"
                     /inference="COORDINATES: protein motif:HMM:NF014376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX6668187.1"
                     /translation="MPFTLRNLREDLDDVGSNFDGSPDLEFRLASKALELERSGLGYQ
                     RIPPGYRFPYGHVHKEQEELYVVVGGSGRMKLDDEIVEVKKWDAVRVPPGTWRGYEAG
                     TEGLELLVFGAPNLGEDPRGDVEGERDWWAG"
     gene            complement(1119..1418)
                     /locus_tag="VF061_01440"
     CDS             complement(1119..1418)
                     /locus_tag="VF061_01440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668188.1"
                     /translation="MAKTKLDKKLYGRMRKSGLRKKVARRLAELPAHVSGGKQAPKPL
                     REAVNQLEAGVSELREHVGRGDRRASARKAARTRAAKARKRSASARKGGRGRAKA"
BASE COUNT          303 a          805 c          708 g          350 t
ORIGIN      
        1 cgtcaacttg ctcgccctgg cgatcgctct caaggaccaa ctgccggcgg agtccgagca
       61 ggaacgcgcg gcgcacgaca agctcaacac gttcacgacc gacggcttcg gctacttcct
      121 ggagcagacc acccggccgc agacgatcgg ctactccctg ctggactccc cgctcggcct
      181 cgcggcctgg ctgctcgacc acgacacgga cgcctactac aagatctcca aggcgttcgt
      241 ggacggtgag cccgtgggca acctcacccg cgacaccatc ctcgacaaca tcacgctgta
      301 ctggctgacg ggcagcggcg cctcggccgc ccgctggtac tgggagttcg gacggttcct
      361 ggccgtggcc atggcgtccg gccagccccc gccgccggtc caggtgccgg tcggcttcac
      421 cacgttcccc ggcgagatct gggccgcgcc gcgcagctgg gtcgaggcgg tctaccccgg
      481 cctcgcgtac ttcaacgagg tcgaccgggg cggccacttc gccgcgtggg aggagccgga
      541 gctcttctcc gccgaggtgc gggccgcgtt caggtcactg cgctagccgc gcacggtcat
      601 cggtccgtcc gaccgtaggg tgcgcctttc ccaacgaaag gacggaccga tggccgcctc
      661 acccaacgtc gtccgcatgc ggctggcctt ctagcgggcg ctagccggcc caccagtcgc
      721 gctcaccctc cacgtctccg cggggatcct cgccgagatt gggcgcgccg aagacgagga
      781 gctcgagacc ctccgtcccg gcctcgtagc ctcgccacgt tccgggcgga acccgcaccg
      841 cgtcccattt cttgacctcg acgatctcgt cgtcgagctt catccgcccg ctcccgccca
      901 cgaccacgta cagctcctcc tgctccttgt gcacgtggcc gtacggaaag cgatagccgg
      961 gcgggatgcg ctggtagccg aggccggacc gctcgagctc gagcgccttg ctcgcgaggc
     1021 ggaactccag gtccggcgag ccgtcgaagt tggagccgac gtcatccagg tcctccctga
     1081 ggttcctgag cgtgaacggc acgggtcgcg atcctacgtc aggctttcgc gcgcccgcga
     1141 ccgccctttc gcgccgacgc gctgcgcttc cgcgccttgg cagcccgggt ccgggcggcc
     1201 ttgcgcgcgg acgcccttcg gtcaccgcgt ccgacgtgct cacgcagctc cgacaccccc
     1261 gcctccagct ggttcacggc ttcgcgtagc ggcttggggg cctgcttgcc gccgctcacg
     1321 tgcgctggga gctcggcgag ccgccgtgcc accttcttgc gcaggccgct cttgcgcatt
     1381 ctgccgtaca gcttcttgtc caacttggtc ttggccatga ggctccttcc gagggctacc
     1441 ggttcgaatt catcacgatt cgcgctccgc gagcgtctcg cgagcggcga tcgtcacgcc
     1501 gtggacggtc gctgagacgg ccctcacgtc cgggcggagc ggtccggagg aaccgcaggc
     1561 ctcacagccg aactgcgcga cgcgctccag gtgcggtccg gtcgccgcgg tgtagtgggt
     1621 tgtctcgcag gcggggcatc gaagggcggt catcgggacc ccgctaccca ggctccagtc
     1681 cgccgaacgt cggccggatg tcgttcagcg aagctcctcg accagcccga tgatgatgcc
     1741 gtcggggccg cggatgtagc cgtatcggta gatgtcctcg tactgcgcca ccgcgcccac
     1801 gagttcggcg ccgtggggcg caggcggtcg acgacggcgt cgacgacgtc gacgacgaac
     1861 gtgaggcgag ggatgcccgg ggtgttcaca ggcgcccgcg gggcggcgct ggtggccgcc
     1921 ggggtttgga aggtagacac ctcgacccgg ccgctgccgt ccggagtccg caggaaggcc
     1981 atgtccgctc ggacgcccct cagtccgacc agctggtcca cccattcacc ctcgaccgtt
     2041 gtctccccct cgagctccag gcccaattcg acgaagaacg cgatcgcggc cgcgagatcc
     2101 tcgaccacga cgcccgtgtg atccagccgg atggtcatcg ccgcgcagag tacggctcgg
     2161 cggccc
//
LOCUS       DASUYN010000071         2291 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_462260, whole genome shotgun sequence.
ACCESSION   DASUYN010000071 DASUYN010000000
VERSION     DASUYN010000071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2291)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2291)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2291
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_462260"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..439
                     /locus_tag="VF061_01445"
     CDS             <1..439
                     /locus_tag="VF061_01445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668189.1"
                     /translation="TLRYRGAPELADPGAWSQALDEAKASDCARGASTVGPHRDDLRL
                     EIADRPIREFGSTGQQRSAAVALKLLELATLREARETEPALLLDDVFAELDDERRQRL
                     AARLVGPDDRQVFLTAPRPEELPRGLHLEVWSVRDGRVQGAGA"
     gene            436..759
                     /locus_tag="VF061_01450"
     CDS             436..759
                     /locus_tag="VF061_01450"
                     /inference="COORDINATES: protein motif:HMM:NF017103.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF721 domain-containing protein"
                     /protein_id="HEX6668190.1"
                     /translation="MNEQPRRPSSLADALASYLRRSGFAKRIQQAGVIEAWAELVGPQ
                     IAAVTAPESVTQDGVLRVRVATAAWANELSLMTPRILARLNDGRQGRVKEIRWVPGPL
                     DRSRT"
     gene            796..>2291
                     /locus_tag="VF061_01455"
     CDS             796..>2291
                     /locus_tag="VF061_01455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit B"
                     /protein_id="HEX6668191.1"
                     /translation="MAKREAALLEGTPEYKAESIQVLKGLEAVRKRPGMYIGSTSENG
                     LHHLVYEVVDNSIDEALAGHCDTINVTIHPDNSVTVQDNGRGIPVDVHPTEKLPAVEV
                     ALTVLHAGGKFDKNTYKVSGGLHGVGVSVVNALSERLEVVVDRDGNRHRMAFVRGKTV
                     KKLEVLGKARGTGTMIRFKPDPEIFTVLEFHYSTLADRLRQLAFLNKGISITIKDERE
                     DQKKQETFFAKGGLVEFVQWLNRNKKALHAKPISFSAVKDDVDVDLALQYEDGYNENT
                     FTFVNNINTHEGGTHLTGFKSALTRTINDVAKRRDFLKKEGFTLSGEDIREGLTCVLH
                     VKVKEPQFEGQTKTKLGNSEVEGIVKAVVNEHLGNYLEEHPPVARNIIEKAVSAARAR
                     EAARKARDLVRKKSGLENAVLPGKLADCSYDDPALCELYRVEGDSAGGSAKQARKREF
                     QAILPLRGKILNVEKARIDKILSNEEIRAMITAIGTGVREDFKLEDAR"
BASE COUNT          422 a          743 c          821 g          305 t
ORIGIN      
        1 gaccctgcgc tatcgcggcg cgccggagct cgccgacccc ggcgcctgga gtcaggcgct
       61 cgacgaggcc aaggcatcgg attgcgcccg gggcgcttcc accgtggggc cgcaccgcga
      121 cgacctccgg ctggagatcg ccgaccggcc gatccgggag ttcggctcca ccggccagca
      181 acggagcgcc gcggtggcgc tgaagctgct ggagctcgcc acgctccggg aggcgcggga
      241 gaccgagccc gcgctcctgc tggacgacgt cttcgccgag ctggacgacg agcgccggca
      301 gcggctcgcg gcgcggctgg tcggtccgga cgaccggcag gtgtttctga cggcgccccg
      361 gccggaggag ctgccccggg gcctgcacct ggaggtgtgg agcgtgagag acggacgcgt
      421 gcagggcgcc ggggcatgaa cgagcagccg cgccgcccct cctcgctcgc cgacgcgctg
      481 gcgagctacc tgcgccggtc cggtttcgcc aagcggatcc agcaggcggg tgtgatcgag
      541 gcgtgggccg agctggtggg gccgcagatc gcggcggtga ccgcgcccga gtccgtgacc
      601 caggacggcg tgctgcgcgt ccgtgtcgcc accgcggcct gggccaacga gctcagcctc
      661 atgacgcccc ggatcctcgc ccgactcaat gacgggcgac agggtcgggt gaaggagatt
      721 cgctgggtgc cggggccact cgaccggtct cggacctagc ggttcacgac gcagcatcac
      781 cagacgacgg agcctatggc caagagagaa gcagccctcc tcgagggcac gcccgagtac
      841 aaagccgagt ccatccaggt cctcaagggg ctggaggcgg tgcgcaagcg tcccgggatg
      901 tacatcgggt ccaccagcga gaacgggttg caccacctgg tctacgaggt ggtggacaac
      961 tcgatcgacg aggcgctggc ggggcactgc gacaccatca atgtcaccat ccaccccgac
     1021 aactcggtca ccgttcagga caacggccgg ggcatcccgg tggacgtgca ccccaccgag
     1081 aagttgccgg ccgtcgaggt cgccctgacg gtcctgcacg cgggcggcaa gttcgacaag
     1141 aacacctaca aggtgtcggg ggggctccac ggggtgggcg tgtcggtggt caacgcgctg
     1201 tcggagcggc tggaggtcgt ggtggaccgg gacgggaacc ggcaccgcat ggccttcgtc
     1261 cgcggcaaga cggtgaagaa gctcgaggtg ctcggcaagg cgcggggcac ggggacgatg
     1321 atccgtttca agcccgaccc cgagatcttc accgtgctcg agttccacta cagcacgctg
     1381 gccgaccggc tccggcagct cgcgttcctg aacaagggca tctcgatcac catcaaggac
     1441 gagcgcgagg accagaagaa gcaggagacc tttttcgcca aggggggcct ggtcgagttc
     1501 gtccagtggc tcaatcgtaa caagaaagcg ttgcacgcca agccgatctc gttcagcgcg
     1561 gtgaaggacg acgtggacgt ggacctcgcg ctccagtacg aggacgggta caacgagaac
     1621 acgttcacct tcgtgaacaa catcaacacc cacgagggtg ggacccatct caccggcttc
     1681 aaatccgcgc tcacccggac catcaacgac gtcgccaagc ggcgcgactt cctgaagaag
     1741 gaggggttca ccctctccgg ggaggatatc cgggaggggc tcacctgcgt gctgcacgtg
     1801 aaggtgaagg agccgcagtt cgaggggcag accaagacca agctggggaa ctccgaggtc
     1861 gaaggcatcg tcaaggcggt ggtgaacgag cacctgggca attacctcga ggagcacccg
     1921 ccggtcgccc ggaacatcat cgagaaggcg gtcagcgcgg cccgggcgcg cgaggcggcc
     1981 cgcaaggctc gtgacctggt gcggaagaag tcggggctgg agaacgcggt gctcccgggc
     2041 aagctggccg actgctccta tgacgacccg gccctgtgcg agctctaccg ggtcgagggc
     2101 gattccgccg gcggcagcgc caagcaggcc cgcaagcgcg agttccaggc gatcctgccg
     2161 ctccggggca agatcctgaa cgtggagaag gcccggatcg acaagatcct cagcaacgag
     2221 gagatccggg ccatgatcac ggcgatcggc accggcgtgc gggaggactt caagctggag
     2281 gacgctcgct a
//
LOCUS       DASUYN010000072         2590 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1564050, whole genome shotgun sequence.
ACCESSION   DASUYN010000072 DASUYN010000000
VERSION     DASUYN010000072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2590)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2590)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2590
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1564050"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1248)
                     /locus_tag="VF061_01460"
     CDS             complement(<1..1248)
                     /locus_tag="VF061_01460"
                     /EC_number="2.7.7.27"
                     /inference="COORDINATES: protein motif:HMM:NF002772.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008878 - glucose-1-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0005978 - glycogen biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate adenylyltransferase"
                     /protein_id="HEX6668192.1"
                     /translation="MSPWSALSPKDVISVILGGGAGTRLFPLTKDRAKPAVPLGGKYR
                     IVDIPISNCLNADLRRIFLLTQFNSSSLHRHIQESYRFDSFAHGFVEILAAQQRTASE
                     SWYQGTADAVRQNLIHLGDYPHRLVLILSGDQLYRMNFRLLLERHAASGAQVTVATTP
                     VRPEAAHAFGIMGMDPDGRVVRFVEKPSDPAVQRSLRVDWSRVEGLESPVDPEALPAS
                     MGIYVFDRAILAEALEGTENDFGKHVIPRIIATHRVHAFQYQGYWEDIGTIRSFYEAN
                     LDLCEPLPKFNFYDATAPIFTHARYLPGTKIIKSRIERSVIADGCIINDALIEHSLVG
                     VRARIEAGATIRDSLVMGADYYETPDRATPEGAPPIGIGQGAWIERAIIDKNARIGDS
                     VRITPDGKPPDVDGPNFHVRDGIV"
     gene            complement(1252..1992)
                     /locus_tag="VF061_01465"
     CDS             complement(1252..1992)
                     /locus_tag="VF061_01465"
                     /inference="COORDINATES: protein motif:HMM:NF024183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HEX6668193.1"
                     /translation="MTEVERFFRRLVSTLAATAPARLQGPLPLDDITGSILPYRAHRR
                     ALELDTVEDYEAVLLRLCAGEGDLVWTEPEEARKRFVEESRSANPDLTALYAFEYVHL
                     TFRPEPLLWALAPDPRADFRPPPEPMVHVPVADFEPEIDESEPPEPVLVLGTAQFEGP
                     PDTAEGGAAPDEAAALEEAGPEGESTAESVAPTCPYCGGSLPTGRTVNFCPHCGQSQT
                     QILCPECRSEVEPGWRHCVNCGAAVGEA"
     gene            complement(2050..>2590)
                     /locus_tag="VF061_01470"
     CDS             complement(2050..>2590)
                     /locus_tag="VF061_01470"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: protein motif:HMM:NF012304.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ribonuclease H"
                     /protein_id="HEX6668194.1"
                     /translation="IRAGGGRLQRRDFYLSEPATTNNRMALKGAAAALEILAGKGARL
                     SVLMVSDSQYLVRGMREWVPGWRNRQWTRKGGPIENLELWKRLDAVRRKHDVQWAWLR
                     GHAGHPKNTYADHLAVRAAREQRSSEGAVASDFDRWLEAEQEKGRYPGYDPDGAFAAL
                     EARVAEGEGFPLVLTEQPG"
BASE COUNT          357 a          897 c          932 g          404 t
ORIGIN      
        1 cacgatgccg tcgcgcacgt ggaagttggg gccgtcgacg tcgggcggct tgccgtcagg
       61 agtgatgcgc accgagtcgc cgatccgggc gttcttgtcg atgatcgccc gctcgatcca
      121 ggcgccctgc ccgatcccga tcggcggcgc gccctcgggc gtggcccggt cgggcgtctc
      181 gtagtagtcc gctcccatga cgagcgagtc ccggatcgtc gcgccggcct cgatccgggc
      241 gcgcacgccc accagcgagt gctcgatcag cgcgtcgttg atgatgcagc cgtcggcgat
      301 caccgagcgc tcgatccggc tcttgatgat cttggtgccg gggaggtacc gcgcgtgggt
      361 gaagatcggc gcggtggcgt cgtagaagtt gaacttgggc agcggctcgc agaggtcgag
      421 gttggcctcg tagaaggagc ggatcgtccc gatgtcctcc cagtagccct ggtactggaa
      481 ggcgtgcacc cgatgggtcg cgatgatccg cgggatgacg tgcttgccga agtcgttttc
      541 ggtgccctcc agtgcctcgg ccaggatggc gcggtcgaag acgtagatgc ccatggacgc
      601 ggggagcgcc tcggggtcta ccgggctctc cagcccctcg acccgggacc agtccacccg
      661 cagcgagcgc tggaccgcgg gatcggacgg cttctccacg aagcgcacca ctcggccgtc
      721 cgggtccatg cccatgatgc cgaaggcgtg ggcggcctcg ggccggacgg gggtcgtggc
      781 gaccgtcact tgcgccccgc tcgccgcgtg ccgctcgagc aggagcctga agttcatccg
      841 gtagagctgg tcaccggaga ggatcagcac cagccggtgg gggtagtccc ccaggtggat
      901 caggttctgc cgcacggcgt ccgcggtgcc ctggtaccag ctctcgctcg cggtccgctg
      961 ctgggcggcg aggatctcca cgaatccgtg ggcgaagctg tcgaagcgat agctctcctg
     1021 gatgtggcga tgcagggagc tgctgttgaa ctgggtgagg agaaagatgc gacggagatc
     1081 ggcgttgagg cagttgctga tggggatgtc cacgatccgg tacttgccgc cgagaggcac
     1141 cgcgggcttg gcccggtcct tggtcagcgg gaagagccgg gtgccggcgc cgcccccgag
     1201 aatgacggag atcacgtcct tcgggctgag cgcgctccac gggctcaccg gctacgcctc
     1261 gcccaccgcg gcgccgcagt tgacgcaatg ccgccagccc ggctcgacct cgctgcggca
     1321 ctcgggacag aggatctgcg tctgactctg cccgcagtga ggacagaagt tgacggtgcg
     1381 gccggtcggg agcgagccgc cgcagtacgg gcaggtcggc gcgaccgact cggcggtact
     1441 ctcgccctcg gggcccgcct cttcgagcgc ggccgcctcg tcgggcgcgg cgccgccctc
     1501 ggccgtgtcg gggggcccct cgaactgcgc cgtgccgagc acgaggacgg gctccggcgg
     1561 ctcggactcg tcgatctccg gctcgaagtc ggcgaccggc acgtggacca tcggttccgg
     1621 gggcgggcgg aagtcggccc gcggatcggg tgccagcgcc cacaggagcg gctcggggcg
     1681 gaaggtcagg tgcacgtact cgaaggcgta gagcgcggtc agatcgggat tggcgctccg
     1741 gctctcctcc acgaaccgct tgcgcgcctc ctccggctcg gtccagacca gatcgccctc
     1801 acccgcgcac aggcggagga gcaccgcctc gtagtcctcc acggtgtcga gctccagcgc
     1861 gcggcggtgg gcccggtagg gcaggatcga gccggtgatg tcgtcgagcg ggagcgggcc
     1921 ctggagccgg gcgggagcgg tggcggccag ggtgctgacc aggcggcgga agaacctctc
     1981 gacctcggtc actggcgccc tcgcgaaagc gtcacggtaa cgcaggttag ggaaggtccc
     2041 ccggcagtgt caaccgggct gctccgtcag caccaacgga aacccctcgc cctccgcgac
     2101 ccgagcctcc agcgcggcga acgccccgtc cgggtcgtag cccggatagc gtcccttctc
     2161 ctgctccgcc tcgagccagc ggtcgaagtc cgaggccacc gccccctcgc tgctccgctg
     2221 ttcgcgggcc gcccgcacgg cgaggtggtc ggcgtaggtg ttcttcgggt gccccgcgtg
     2281 cccccgaagc catgcccact gtacgtcgtg cttccgccgc acggcgtcga gccgcttcca
     2341 gagctccagg ttctcgatcg ggccgccctt tcgggtccac tgacgattcc gccagcccgg
     2401 gacccactcc cgcatccccc gcaccaggta ctgggaatcc gagaccatca gcacgctgag
     2461 ccgtgccccc ttgccggcga ggatctccag ggcggcggcc gcgcctttca gggccatccg
     2521 gttgttcgtc gtggccggct cgctgaggta gaaatcccgc cgctggagcc ggcccccgcc
     2581 ggctcggatc
//
LOCUS       DASUYN010000073         4415 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_682990, whole genome shotgun sequence.
ACCESSION   DASUYN010000073 DASUYN010000000
VERSION     DASUYN010000073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4415)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4415)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4415
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_682990"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..950)
                     /locus_tag="VF061_01475"
     CDS             complement(<1..950)
                     /locus_tag="VF061_01475"
                     /inference="COORDINATES: protein motif:HMM:NF014386.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HEX6668195.1"
                     /translation="MPEPTLADLMAVLLALSLNAYVLLGGADFGGGVWDMLARGPRRA
                     QQREVIAHAIGPIWEANHVWLILAIVLAFTCFSPAFARVMTVLHIPLSLMLVGIVLRG
                     SAFTFRTYDDEHDAAQRRWGRIFSSASVLTPLLLGVCIGAVASGRVVAPTRGTFAERF
                     VEPWLTPFALGVGVLTLALFAFLAAVFLTLETRDRDLVEDFRRNALGAGVAVFLAAGL
                     VLLLSYRDAPLMTAGLVGSRFALPLHIATGLSAVAVFAALWRRRFGAARLLAGLQVSC
                     IFWGWAASQYPYLVPPDLSIGNSAAPSITLEITLWALAGGT"
     gene            complement(943..2286)
                     /locus_tag="VF061_01480"
     CDS             complement(943..2286)
                     /locus_tag="VF061_01480"
                     /inference="COORDINATES: protein motif:HMM:NF013791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0070069 - cytochrome complex [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0019646 - aerobic electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HEX6668196.1"
                     /translation="MSDLLAARSQMAMSLAFHIIFAVVGIGMPVLMVIAERRWQKTGD
                     PICLELARRWSKGTAILFAVGAVSGTVLSFELGLLWPRFMEAAGPIIGMPFSLEGFAF
                     FTEAIFLGVYLYGWDRISPRAHLWSGILVAVSGAASGVFVVIANAWMNAPTGFDLVDG
                     RITNIDPVAGMLNPMAFQQTLHMTLAAYAATGFAVAGIHAFLLLLDRENSFHRRALAI
                     ALMVGAPAALLQPISGDMSAKAVARLQPAKLAAMEAHFETRTRAPLLIGGWPDMERGE
                     VDYAIRIPGGLSFLAFGDPDAEVKGLEEFPRDQWPPVPIVHVAFQIMVALGTYMALLS
                     LWIAFAAWRRHDIGSDRRLLAAVALATPMGFIAIEAGWTVTEVGRQPWIVYGVMRTAD
                     AVTPMPGLVYPFLVFTVLYCFLGVIVGWLLYRQILRSPRGEEWSRIYAPPQRADA"
     gene            complement(2369..3025)
                     /gene="pdeM"
                     /locus_tag="VF061_01485"
     CDS             complement(2369..3025)
                     /gene="pdeM"
                     /locus_tag="VF061_01485"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR04123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ligase-associated DNA damage response
                     endonuclease PdeM"
                     /protein_id="HEX6668197.1"
                     /translation="MSDVMLTIAGEDVRLLPERALFWPRACTLVVADVHWGKAATFRA
                     AGIPIPGGTTSEDLARLDRAVHRTGARRLVVLGDLFHAKAGRIATRTLATLRDWRERT
                     SRLEIQLVRGNHDRHAGDPPDDLRINCVNAPAFLPPFVLRHQPEPSPEGYTLAGHIHP
                     ALVVSGPALQRERLPCFLVRPRVTLLPAFGSFTGSAPVHPEPCDRAFVVADGEVLPIG
                     "
     gene            complement(3022..>4415)
                     /locus_tag="VF061_01490"
     CDS             complement(3022..>4415)
                     /locus_tag="VF061_01490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA ligase-associated DEXH box helicase"
                     /protein_id="HEX6668198.1"
                     /translation="LELVDVAAARAALEAREIEARRPVERPLDLLAQHAVTISIGGGF
                     RSRELLDEVRTTWAYRDLRDDEWSWVLDFITRGGSALQSYPEYSKVVEREGRYVVAGR
                     MAALRHRLSIGTIVSESAMKVQLLRGRTIGTVEENFIARLRPGDVFTFAGRVLEFVRV
                     RGMVAHVRRSTAKSNSVPHWSGARMPISPQLAAWIRIKLDEARRGLYQGPEMAAVRNI
                     LELQGAWSCLPAVDELLIERVETREGHHLFFYPVEGRLVHEGLAALFAYRIAQLGPIS
                     FTLAANDYGLELLSPERAPLEEAIEAGLLSPEHLLHDIPASLNAAELARRQFREIARI
                     AGLVFQGYPGAAKAVKQVQASSELLYDVFARYEPENLLLFQAHREVLERQLEQSRLAR
                     ALARIASGRVSVVDVERPTPLAFPLLVDRAREQVTSEKLGDRIRRMAAPLERAAEKTR
                     FARGGHRGFRSGG"
BASE COUNT          735 a         1527 c         1610 g          543 t
ORIGIN      
        1 gttccgccgg ccagcgccca cagggtgatc tcaagcgtga tggacggcgc ggccgaattc
       61 ccgatgctga gatccggcgg gaccaggtac gggtactgtg acgcggccca accccagaag
      121 atgcaggaaa cctggaggcc cgccaggagc ctcgcggccc cgaaccgccg gcgccagagc
      181 gcggcgaata cggcgaccgc cgagaggccg gtcgcgatgt ggagcggcag cgcgaacctg
      241 gagcccacga ggcccgccgt catgagcggg gcgtcgcggt aggagagcag caggaccagc
      301 ccggcggcga ggaacacggc gacgccggcg ccgagcgcgt tgcggcgaaa gtcctcgacc
      361 aggtcgcggt cgcgcgtctc cagggtgagg aacacggccg ccaggaaggc gaagagcgcg
      421 agggtgagca ccccgacgcc gagcgcgaac ggcgtgagcc acggctcgac gaaccgctcg
      481 gcgaacgtgc cgcgggtggg tgccactacc cggccgctgg ccacggctcc gatgcatacg
      541 ccgagcagca ggggggtgag cacgctggcg ctggagaaga tccggcccca ccggcgctgg
      601 gcggcgtcgt gctcgtcgtc gtaggtgcgg aaggtgaagg ccgagccccg gagcacgatc
      661 ccgaccagca tcagggagag cggaatgtgc agcaccgtca tgacccgggc gaacgccggc
      721 gagaagcagg tgaacgcgag cacgatcgcg aggatcagcc agacgtggtt cgcctcccag
      781 atcggcccga tggcgtgcgc gatcacctcg cgctgctggg cccgccgggg tccgcgggcc
      841 agcatgtccc acacgccgcc cccgaagtcg gccccgccca gcagcacgta cgcgttgagg
      901 gagagggcca ggaggacggc catgagatcg gccagggtcg gttcaggcat cggccctctg
      961 gggcggggcg tagatccggc tccactcctc gccgcgaggg ctccggagga tctggcggta
     1021 gagcagccag ccgacgatca cgccgagaaa gcagtacagc acggtgaaca cgaggaaggg
     1081 gtacaccagg ccgggcatcg gcgtcaccgc gtcggcggtg cgcatgacgc cgtacacgat
     1141 ccacggctgc cgcccgacct cggtcacggt ccacccggcc tcgatggcga tgaatcccat
     1201 gggggtcgcc agcgcaacgg cggcaagcag ccgccgatcg gagccgatgt cgtgacggcg
     1261 ccaggctgcg aatgctatcc acagggagag cagggccatg tacgtcccca gcgccaccat
     1321 gatctggaag gcgacgtgga cgatggggac ggggggccac tggtcgcgag gaaactcctc
     1381 gagtcccttg acctcggcgt ccgggtcgcc gaaggcgaga aaggagagcc caccggggat
     1441 gcggatggca tagtccacct ccccgcgctc catgtcgggc caccccccga tgagcagcgg
     1501 ggcccgggtc ctggtctcga agtgggcctc catcgccgcc agcttcgccg gctgcagccg
     1561 ggcgacggcc ttcgcgctca tgtcgccgga gatcggctgc agcagggcgg caggggcgcc
     1621 gaccatcagc gcgatcgcga gcgcgcgccg gtgaaaggag ttctcccggt ccagcagcag
     1681 caggaaagcg tggatgccgg cgaccgcgaa gccggtcgcg gcgtacgcgg cgagcgtcat
     1741 gtgcagggtc tgctggaacg ccatcgggtt cagcatgccg gccacgggat cgatgttggt
     1801 gatgcgtccg tccaccaggt cgaaccccgt gggcgcgttc atccaggcgt tggcgatcac
     1861 cacgaagacg cccgacgccg cgccgctcac cgccaccagg atgcccgacc agaggtgcgc
     1921 cctgggcgag atccggtccc agccgtagag atagaccccg aggaagatcg cctcggtgaa
     1981 gaaggcgaag ccctcgagcg agaagggcat cccgatgatg ggtcccgccg cctccatgaa
     2041 ccggggccac aggaggccga gctcgaagga gagcaccgtc cccgagaccg cgcccacggc
     2101 gaagagtatc gcggtgccct tggaccagcg ccgggcgagc tcgaggcaga tgggatcacc
     2161 ggtcttctgc caccgccgct ccgcgatcac catgagcacc ggcatgccga tcccgaccac
     2221 ggcgaagatg atgtggaagg ccagggacat cgccatctgg gagcgggccg cgagcagatc
     2281 ggacatcggg attccggggt gatgggcttg gttcgggagc cgccgctaga tataccgggt
     2341 gactgctgcc gagcgcgacc cccactacct acccgatcgg cagcacctca ccgtcggcca
     2401 cgacgaacgc ccggtcgcac ggctccggat ggaccggcgc gctgccggtg aagctgccga
     2461 aggccggcag cagggtcacc cgaggccgca ccaggaagca gggcaggcgc tcccgctgga
     2521 gcgcggggcc gctcaccacg agggccgggt ggatgtgacc cgccagggtg tagccctcgg
     2581 gtgagggctc cggctggtgg cgcagcacga acggtgggag aaacgccggc gcattgacgc
     2641 agttgatccg caggtcgtcg ggagggtcgc cggcgtggcg atcgtgattc ccgcgcacca
     2701 gctggatctc gagccggctg gtccgctcgc gccagtcccg cagggtcgcc agcgtgcggg
     2761 tggcgatgcg ccccgccttc gcgtggaaca ggtcgcccag caccaccagg cgccgcgcgc
     2821 cggtgcggtg gaccgcgcgg tcgagccggg cgagatcctc gctggtggtg cccccgggaa
     2881 tggggatgcc ggccgcccgg aaggtcgccg ccttccccca gtggacgtcg gccaccacga
     2941 gggtgcacgc gcgaggccag aagagcgcgc gctcgggcag gagccgcacg tcctcgcccg
     3001 cgatggtgag catcacgtcg ctcatccgcc gctccggaag ccgcggtggc cgccccgcgc
     3061 gaagcgggtc ttctcggccg cgcgctcgag cggcgccgcc atgcggcgga tccggtcgcc
     3121 cagcttctcc gaggtcacct gctcgcgggc gcgatccacc agcaggggga aggccagcgg
     3181 tgtgggccgc tccacatcga ccacgctcac ccggccggac gcgatccgcg ccaatgcccg
     3241 agccagccgg ctctgctcca gctgccgctc cagcacctcg cggtgcgcct ggaagagcag
     3301 aaggttctcc ggctcgtagc gggcgaagac gtcgtagagc agctcgctcg aggcctggac
     3361 ctgcttcacc gccttcgcgg cgccgggata gccctggaac accagccccg cgatgcgggc
     3421 gatctcccgg aactgccggc gggccagttc cgccgcgttg aggctcgccg ggatgtcgtg
     3481 cagcaagtgc tcgggcgaga ggaggccggc ctcgatggcc tcctcgagcg gggcccgctc
     3541 cggggagagc agctccaggc cgtagtcgtt ggcggccagg gtgaaggaga tggggccgag
     3601 ctgggcgatt cggtaggcga agagggcggc aagaccctcg tggaccaggc gtccctcgac
     3661 cggatagaag aagagatggt gtccctcgcg ggtctccacc cgctcgatca gcagctcgtc
     3721 caccgccggg aggcacgacc aggccccctg gagctcgagg atgttgcgca cggccgccat
     3781 ttcgggcccc tggtagaggc cgcggcgcgc ctcgtcgagc ttgatccgga tccacgcggc
     3841 gagctgggga gagatcggca tccgcgcccc ggaccagtgc ggcacgctgt tgctcttggc
     3901 ggtggaacga cgcacgtgcg ccaccatccc gcgaacccgc acgaactcga gtacgcgacc
     3961 ggcgaaggtg aagacatccc ccggccggag ccgcgcgatg aagttctcct ccaccgtgcc
     4021 gatcgtccgg ccgcggagca actgcacctt catggcggat tcgctcacga tggtgccgat
     4081 ggagagccgg tgccgcaggg cggccatcct gcccgcgact acgtagcgtc cttcccgctc
     4141 cacgaccttg ctgtactccg gataggactg cagggcgctg cccccgcgag tgatgaagtc
     4201 gagcacccag ctccactcgt cgtcgcgcag atcgcggtag gcccaggtgg tccgcacctc
     4261 gtcgagcagc tcccgggagc ggaagccgcc gccgatcgag atcgtcaccg cgtgctgcgc
     4321 caggaggtcg agcggccgct cgaccgggcg gcgagcctcg atctcgcgcg cctccagcgc
     4381 ggcgcgcgcg gccgcgacgt ccaccagctc caacg
//
LOCUS       DASUYN010000074         2492 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_21314, whole genome shotgun sequence.
ACCESSION   DASUYN010000074 DASUYN010000000
VERSION     DASUYN010000074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2492)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2492)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2492
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21314"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..363
                     /locus_tag="VF061_01495"
     CDS             <1..363
                     /locus_tag="VF061_01495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668199.1"
                     /translation="FAALYPLTQLYQLEEDTRRGDRTLAIMLGIRRSLNVALCAAGAA
                     FVLFAGAALRSSWAPGVASAWRWSVLGLALVAWAAVLLPWRRSAERLGPAEHQRRMYL
                     ALGAWAITDAAVLLAWGV"
     gene            431..1057
                     /locus_tag="VF061_01500"
     CDS             431..1057
                     /locus_tag="VF061_01500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668200.1"
                     /translation="MDAAAELHGDHDVTDVPSIVRGSVLLGLCEAVIVLLLSLASRLL
                     AGPLETVVLAVLLLLGLAPVTLLPGIWTRARTIEGIAGAAGIGLGATFVFLLVDVVLL
                     QHIGTYTNRWWQIGGSNWWYHPIWWMVGTFLPWLGAWILANQVERNGRISAPAAFGTA
                     VGFALAAGVVAVLIGFPGARWNLPTFGVAFLPGLALATALSALGGRRA"
     gene            1062..1370
                     /locus_tag="VF061_01505"
     CDS             1062..1370
                     /locus_tag="VF061_01505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668201.1"
                     /translation="MRWIRLLFRIFGWLLTPFLAWAASFFGAVAGALLAMRLEDPVKG
                     LALTALFGALTGFAALIAWLGYLRRSPEVREVLAVTEDGTPDTTEILIPPPDAEAQPR
                     "
     gene            1367..1756
                     /locus_tag="VF061_01510"
     CDS             1367..1756
                     /locus_tag="VF061_01510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668202.1"
                     /translation="MIRRCALLGMLTAPAGGCGPREETGAAATDSAAAEPAPPADSLA
                     ATAPGGVEIWFTLAREGKAADGSTCIDRTLEIRREGTRVPVPLLYTGSAPEIVNDTTM
                     RARLSDRCIPGDAYLVNLRTGRPVRER"
     gene            1756..>2492
                     /locus_tag="VF061_01515"
     CDS             1756..>2492
                     /locus_tag="VF061_01515"
                     /inference="COORDINATES: protein motif:HMM:NF013073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NlpC/P60 family protein"
                     /protein_id="HEX6668203.1"
                     /translation="MRRTDVGGALVFLVVAALGPTPLAAQGIEGQVGRFYDDGGWDVY
                     RLGMSRQLTGPLGLGVHGNYLQRAGGGEGAFAGLALDVTAFKRDGEGPYLVAGVGAGM
                     GSPLSDEFSDTWGSWSVGAGYQVLPVSFLSFGAETRWRQMSLDARKGIEVTAGLSIRF
                     GGRGSRPARPAETPGSAVPAVAEGPPGAPVAPLPPAGDREPRRLREAVVATAREAMGR
                     PYEWGGTGDNGGGFDCSGLIQHAYARHG"
BASE COUNT          289 a          886 c          897 g          420 t
ORIGIN      
        1 ttcgccgcgc tctacccgct cacccagctc taccagctcg aggaggacac ccgccgcggc
       61 gaccggacgc tcgcgatcat gctgggcatt cgccgcagcc tgaacgtggc cctctgcgcg
      121 gcgggcgccg cattcgtgct cttcgccggg gcggcgctcc gctcttcctg ggcgccgggc
      181 gtcgcatcgg catggcgctg gagcgtcctg gggttggctc ttgtcgcctg ggccgcggtg
      241 ttgctgccct ggcggcgaag cgcggagcgc cttgggccgg cggaacatca gcgcaggatg
      301 tacctcgcgc tgggagcctg ggccatcacc gatgccgccg tcctcctggc gtggggagtc
      361 tgatccgggt cttggcccgt ccccgcgaca cccggtatac ttcgcccgac cactctcaac
      421 cggagaccgg atggatgccg cagccgagct gcacggcgat cacgacgtga ccgacgtccc
      481 ttccatcgtg cgcggatcgg tgctcctggg gctctgcgag gccgtcatcg tcctgctgct
      541 ctcgctggca tcgcggctcc tggcagggcc cctggaaacg gtcgtcctgg cggtgctgct
      601 gctcctgggt ctcgcgccgg tcaccctcct gcccggcatc tggacccggg cccgcacgat
      661 cgagggcatc gccggtgcgg cgggcatcgg actcggcgcc acgttcgtct tcctcctggt
      721 ggacgtcgtc ctgctccagc acatcggcac ctacaccaac cggtggtggc agatcggcgg
      781 cagcaactgg tggtatcacc cgatctggtg gatggtcgga accttcctgc cgtggctcgg
      841 cgcctggatc ctggccaatc aggtggagcg aaacggccgc atctcggctc ccgccgcctt
      901 cggcaccgcc gtgggtttcg cgctcgcggc cggcgtggtg gccgtcctca tcggcttccc
      961 tggcgcacgc tggaacctgc ccactttcgg cgtcgctttc ctccccggcc tggcgctcgc
     1021 caccgctctc tcggcgctgg gcggtcgccg cgcctgacgg catgcgctgg atccgcctgc
     1081 tcttccgcat cttcggctgg ctgctcacgc ctttcctggc ctgggcagct tcgtttttcg
     1141 gcgcggtggc tggcgcgctc cttgccatgc ggctggagga tccggtgaag ggactggcgc
     1201 tcacggccct cttcggggcc ctcacggggt tcgccgcgct gatcgcgtgg ctcggctacc
     1261 tccggcgctc gcccgaggtg cgcgaggtgc tggcggtgac ggaggacggt acgcccgata
     1321 cgacggagat cctgattccc ccacccgacg cggaggccca accgcgatga tccgtcgctg
     1381 cgccctcctc ggcatgctca cggcccccgc cggtggttgc ggtccgcgag aggagactgg
     1441 cgccgcggcg acggattccg cggctgccga gccggcgccg ccggccgatt cactcgcggc
     1501 caccgcgccc ggcggcgtgg agatctggtt tactctcgcg cgcgagggca aggccgccga
     1561 cgggagcacc tgcatcgacc gcacgctcga gatcaggcgc gagggcaccc gagtgccggt
     1621 gccgctcctc tacaccggct cggccccgga gatcgtgaac gacaccacca tgcgcgcacg
     1681 actctcggat cgctgcatcc cgggtgatgc ctacctggtg aacctgcgga ccggccgtcc
     1741 ggtccgggag cgctgatgcg gagaacggat gtcggaggcg cgctcgtgtt cctggtggtg
     1801 gcggccctcg ggcccacacc actggcggcg cagggcatcg aaggtcaggt gggccgcttc
     1861 tacgatgacg gtggctggga cgtgtaccgt cttggcatga gtcggcagct cacgggacca
     1921 ctcggcctcg gcgtgcacgg gaattacctc cagcgggccg gtggcggcga gggagcgttc
     1981 gccggactcg cgctcgatgt gaccgcgttc aagcgggacg gggaaggacc ctacctggtg
     2041 gccggagtcg gtgccgggat ggggtcgccg ctgagcgacg agttctccga cacctggggc
     2101 tcctggtcgg taggggcagg ttatcaggta ctgcccgtct cgttcctgtc cttcggcgcg
     2161 gagacccgct ggaggcagat gtcgctggac gcgcggaagg ggatcgaggt gaccgccggg
     2221 ctctccatcc ggttcggtgg ccggggcagt cggcccgcgc ggcccgcgga aacgcccggc
     2281 tccgcggtgc cagcggtggc cgaggggccg ccgggcgctc ccgtggcccc cctgccgccg
     2341 gccggcgacc gcgagccccg ccggctgcgg gaggccgtgg tggccacggc gcgagaggcg
     2401 atgggtcgtc cctacgagtg gggcggcacc ggtgataatg gtggaggctt cgactgctcc
     2461 ggcctgatcc agcacgccta tgctcgccac gg
//
LOCUS       DASUYN010000075         2015 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_904247, whole genome shotgun sequence.
ACCESSION   DASUYN010000075 DASUYN010000000
VERSION     DASUYN010000075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2015
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_904247"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            199..975
                     /locus_tag="VF061_01520"
     CDS             199..975
                     /locus_tag="VF061_01520"
                     /inference="COORDINATES: protein motif:HMM:NF024183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HEX6668204.1"
                     /translation="MTAPSPSAACPACGASASGKFCSACGASLQPGSCARCRASLGAH
                     ARFCHRCGHPVGAEAHASGSERSAWIFAGTLSAVLVGLIVYNVVSREPAPQIPNMANA
                     GAAAGDTTARAGAAPDISQLTPRERFDRLFNRIMQAAEQGDTAQVQRFTPMALGAYAQ
                     LDTVDVDARYHAAVIRLQTGDVAGAHALADTILAQSPDHLFGYLVRGTAATLAADPGA
                     RTQAEREFLRRYDREMAAGRPEYRDHAPVIEEFRKGAGGR"
     gene            1016..1870
                     /locus_tag="VF061_01525"
     CDS             1016..1870
                     /locus_tag="VF061_01525"
                     /inference="COORDINATES: protein motif:HMM:NF014658.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MqnA/MqnD/SBP family protein"
                     /protein_id="HEX6668205.1"
                     /translation="MPRTIHVAHSPDSDDAFMFYALATDKLDTGDLRYVHELSDIESL
                     NQRARRGELEVTAVSIHAYAHIWRQYALLGSGSSMGDGYGPRLVSARPRPADPRAALR
                     GVRVAVPGLLTTAYLALKLYQPHVDHVVVPFDRIEEAVHAGEVDVGLLIHEGQLTFGD
                     SGLHLWTDLGAWWMEETGLPLPLGGNAVRRDLGDAVIGQIARDLRASIVYALEHRAPA
                     LAHASRYNRGIGDARTDAFVGMYVNQWTVDYGPRGRRAVQQLLDRGHEAGLIPERVPV
                     DFVDPSSD"
BASE COUNT          288 a          761 c          684 g          282 t
ORIGIN      
        1 ccagactcgg tcggtcgccg ttgcccgacg acctggattt ggcaggcgtc atatgggatc
       61 gtaccccgcg acgggagagt gggacggcag gcgagcgccc gccggacaag ggtaaagggt
      121 aaccgtcccg gcggaagggc cgccaccgac ggcccgacct accgagccgc tgcggccggg
      181 attacgcttc ctccccacat gaccgctccg tccccttccg ccgcctgtcc cgcctgcggc
      241 gcgtccgcct ccgggaagtt ctgcagtgcc tgtggtgcga gcctccaacc cgggagctgc
      301 gcccggtgcc gcgcctccct gggcgcgcac gcgcgcttct gccaccgctg cggccatccg
      361 gtcggggccg aggcccatgc ctcgggctcg gagcgctcgg cgtggatctt cgcgggcacg
      421 ttgtccgcgg tgctggtggg gctcatcgtc tacaacgtcg tgtcccggga gcccgccccc
      481 cagattccca acatggccaa cgcgggcgcc gccgcgggag acaccaccgc ccgggccggc
      541 gccgcgcccg acatcagcca gctcacgccc cgggagcgct tcgaccggct cttcaaccgg
      601 atcatgcagg cggccgaaca gggcgacacc gcgcaggtgc agcgcttcac ccccatggcg
      661 ctcggcgcct acgctcagct cgacacggtg gacgtggacg cccgctatca cgccgcggtc
      721 atccggctgc agaccggcga cgtcgccggc gcccacgcgt tggccgacac catcctggcg
      781 cagtcgcccg accatctgtt cggctacctg gtgcgcggca ccgccgccac gctcgccgcc
      841 gatcccggcg cgcgcaccca ggccgagcgc gagttcctcc ggcgctacga ccgtgagatg
      901 gccgccggac gcccggagta ccgggaccac gcgccggtga tcgaggagtt caggaaaggg
      961 gcgggagggc ggtagcggca tccctccccc cgtccgccat cccaggcgag gacccatgcc
     1021 ccgcaccatc cacgtcgccc acagccccga ctccgacgac gcgttcatgt tctacgccct
     1081 ggcgaccgac aagctcgaca cgggcgacct gcgctacgtg cacgagctgt cggacatcga
     1141 gtcgctgaat cagcgcgcca ggcggggtga gctcgaggtg accgcggtct ccatccacgc
     1201 gtacgcccac atctggcggc agtacgcgct gctcggctcc gggtcgtcca tgggcgacgg
     1261 gtacggtccg cgactggtga gcgcccgtcc ccggcccgcc gaccctcgcg ccgcgctgcg
     1321 cggagttcga gtggcggtgc ccggcctcct caccaccgcg tatctggcgc tcaagctgta
     1381 tcagccgcac gtagaccacg tggtggtgcc gttcgatcgg atcgaggagg cggtccatgc
     1441 cggcgaggtg gacgtcggcc tgctcatcca cgagggtcag ctcaccttcg gcgacagcgg
     1501 tctccacctc tggaccgatc tcggtgcctg gtggatggag gagaccgggc tcccgcttcc
     1561 cctcggcggc aacgccgtgc ggcgcgacct gggcgacgcc gtgatcgggc agatcgcgcg
     1621 cgacctgcgg gcgagcatcg tgtacgccct agagcaccgg gcacccgcgc tggcgcacgc
     1681 cagccgctac aaccgcggca tcggcgatgc gcgcaccgat gcgttcgtgg gcatgtacgt
     1741 gaaccaatgg accgtggact acggaccgcg cggccgtcga gcggtgcagc agttgctcga
     1801 ccgcggacac gaagccggac tcatccccga gcgcgtgccg gtggacttcg tggatccctc
     1861 gagcgattga cgctgccccc ggtacgtcct agcttctcgg aaccccctgg agcaagccct
     1921 cacttgcccg cgtcggcgcc gacaggcgcg gccgccggca gaggagcgcg cggtgaacga
     1981 cggaccagtg accctcctgg tcgttgacga tgagg
//
LOCUS       DASUYN010000076         2896 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_243200, whole genome shotgun sequence.
ACCESSION   DASUYN010000076 DASUYN010000000
VERSION     DASUYN010000076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2896)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2896)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2896
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_243200"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..726)
                     /locus_tag="VF061_01530"
     CDS             complement(<1..726)
                     /locus_tag="VF061_01530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis/export family
                     protein"
                     /protein_id="HEX6668206.1"
                     /translation="MRALRRLCRPFPRPALLLSVLLAAIPAPAVAQVPVQVRPGQQLP
                     SPDQARDMLQNQPDLVRQLRDRLQQSGLTDDQIRARLRAAGYPENFLDQYLSGADTSL
                     AVRPGPRTLDAVTALGILSPQEMDSLQLADSAFAISDSLRQVLDSLRYLHLDSLRADS
                     LADSLDAIRPGGLALFGVQTFRRLSTQFEPMDAGPVDENYRLGPGDALVLILTGDIEQ
                     AHMLEVTREGFIVIPQAGQLYVAN"
     gene            complement(767..1879)
                     /locus_tag="VF061_01535"
     CDS             complement(767..1879)
                     /locus_tag="VF061_01535"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX6668207.1"
                     /translation="MRAVVVSRVYADPATRGKLKALAGLGVTVAAAVPDRWSPLGLGA
                     EQQTGFGEDAGVRTVPIPVRGSTAPGSDPSWTRGPLRRLLTDFRPELIQIEEEPWTHA
                     AATSAALARRLHVPYTVLTRESLRASHGAMGRFRRSRVLSGARGIVAANELAAKVVGR
                     NHPSLPLRVISQVGVSLPLQTSRPERVGLTIGFLGRLLPEKGLDLVFRACVKLIGRWS
                     ITVVGTGPAQEELEGLAERLGIAGRVTWLGALPRQRVDDVWPRLDCVVLPSRTAPNWI
                     EGMPRAAIEAMANGVPVVTSTAGALPETVGQAGIVVPEEDVDAIAGALQRLHDDPTER
                     QRLAAEGRRRVMGEYTDAAIAEKTLSFWRDTIAATA"
     gene            2057..>2896
                     /locus_tag="VF061_01540"
     CDS             2057..>2896
                     /locus_tag="VF061_01540"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX6668208.1"
                     /translation="MRILHLAKYYWPRSGGMERVVQSLAEGAASLGHQVEVVAVETLG
                     RAGGSPRQRSSVTRAFSLAALGHQEIAPGYIAAAWKRADIIHVHHPHPLADVACLLRA
                     RRTPVVVTQHADSRRSVYRPAARLVLRRAAAVVVPSRAHLALSTELTGFESKVEVIPF
                     GIDNTRWEMVPPPPPGAAPRAIFIGRLVSYKGLDILLRAMERVPELRLDIVGSGPEGP
                     RLRTLAQALAITDRVRWYGEYPDEDLPRRMADADFLVLPSVTVEEMFGLVVLEAMAAG
                     RPVI"
BASE COUNT          396 a          991 c         1109 g          400 t
ORIGIN      
        1 gttggcgacg tacagctgcc ccgcctgcgg gatcacgatg aacccctcgc gggtcacctc
       61 cagcatgtgg gcctgctcga tgtcgccggt caggatcagg accagggcgt cgcccgggcc
      121 gaggcgatag ttctcgtcca ccggtcccgc gtccatcggc tcgaactggg tggacaggcg
      181 gcggaaggtc tggacgccga agagcgcgag gccgccgggc cggatcgcgt ccagcgagtc
      241 ggccagcgag tcggcccgga gcgaatcgag atggaggtag cgcagcgagt cgagcacctg
      301 ccggagcgaa tccgatatgg cgaaggcgga gtcggccagc tggagggagt ccatctcctg
      361 gggcgagaga atgccgagcg cggtcacggc gtcgagcgtg cgtgggccgg gacgcaccgc
      421 gagcgaggta tccgctcccg agagatactg gtcgaggaaa ttctccgggt atccggccgc
      481 cctgagccgg gcacggatct ggtcgtcggt gagccccgat tgctggagcc ggtcgcggag
      541 ctggcgcacc aggtcgggct ggttctgcag catgtccctc gcctggtcgg gcgacgggag
      601 ctgctggccc ggccggacct ggaccggcac ctgggcgacg gcgggggccg gaatcgctgc
      661 gaggagaacg gacaggagca gcgccggccg cgggaacgga cggcagaggc gtcgcagggc
      721 tctcatgggc atggggcctt gaagttcacc cgtaagttac aggatgtcaa gcggttgcag
      781 cgatggtgtc gcgccagaag ctgagggtct tctcggcgat cgcggcgtcg gtgtactcgc
      841 ccatgacgcg ccgccgcccc tcggccgcga gccgctgccg ctccgtgggg tcgtcgtgca
      901 ggcgctgcag cgctccggcg atcgcatcca cgtcttcctc cggcacgacg atgccggcct
      961 ggccgacggt ctcgggcaag gcgccggcgg tgctggtgac gacgggcaca ccgttggcca
     1021 tcgcctcgat cgcggcgcgg ggcattccct cgatccagtt gggcgcggtg cgggaaggga
     1081 gcaccacgca gtcgagccgc ggccagacgt cgtccacccg ctgccgcggg agtgcgccga
     1141 gccaggtgac ccgtcccgcg atgcccagcc gctcggcgag cccctcgagc tcctcctgcg
     1201 cgggaccggt gccgaccacg gtgatgctcc agcggccgat cagcttgacg caggcccgga
     1261 acaccaggtc gagccccttc tccggcagca ggcgtcccag gaatccgatg gtgaggccga
     1321 cccgctcggg acgcgaggtc tggagcggca gggacacgcc gacctgggag atcacccgga
     1381 gggggagcga cggatggttc cggccgacca ccttcgccgc cagctcgttc gcggcgacga
     1441 tcccccgggc cccgctcagc acccgtgacc ggcggaatcg gcccatcgcg ccgtggctcg
     1501 cgcggagact ctcgcgggtg aggacggtgt agggaacatg cagacggcgg gccagcgcgg
     1561 ccgaggttgc cgccgcgtgg gtccagggct cctcctcgat ctggatcagc tcgggacgga
     1621 agtcggtgag gagccgccgg agggggccgc gggtccagct ggggtcgctg cccggcgcgg
     1681 tgctgccgcg gacggggatg gggacggtgc gcacgccggc gtcctcgccg aagccggtct
     1741 gctgctccgc gcccagcccg agcggcgacc agcggtccgg caccgcggcc gcgaccgtga
     1801 ctcccaggcc ggcgagcgcc ttgagcttgc ccctggtcgc cggatcggcg tagacccgcg
     1861 acaccacgac ggcgcgcacg tcagcgcgcc aggagctcga gagcgatcgg gatgcgcggc
     1921 atgggaaccg gggaagaggt gggcgcgcgt ggacgtccgt gacgttcggc gccgtaatct
     1981 ggcgcggtga gtcctcccca ccaaggggcg gcgttgacac cggtcgccgt ccgtggtgag
     2041 acttggcgag tcgtccatgc gcattctcca tctggcgaag tactactggc cgcgctccgg
     2101 gggcatggag cgcgtggtgc agagtctggc cgagggggcc gcgagcctgg ggcaccaggt
     2161 cgaggtcgtc gcggtggaga ccctgggccg tgccggcggc tcgccacggc aacgctcgtc
     2221 ggtcacccgg gccttctcgc tcgccgcgct gggccaccag gagatcgccc cgggctatat
     2281 cgccgccgcc tggaagcggg cggacatcat ccacgtccat catccccatc ccctggcgga
     2341 cgtcgcctgc ctgctccgcg cccggcgcac gccggtggtc gtgacccagc acgccgactc
     2401 gcggcgctcg gtgtaccggc ccgccgcccg cctggtgctc cgccgcgcgg ccgcggtggt
     2461 ggtgccgagc cgggcccatc tcgcgctgtc caccgagctc accggcttcg agtcgaaggt
     2521 cgaagtgatt cccttcggca tcgacaacac ccgctgggag atggtgccgc cgccgccacc
     2581 gggcgcggcg ccgcgggcga tcttcatcgg ccggctggtg agctacaagg gcctcgacat
     2641 cctgctccgc gccatggagc gggtgccgga gctgcggctc gacatcgtgg gctcgggacc
     2701 ggagggcccg cggctccgga cgctggccca ggcgctcgcg atcaccgacc gggtgcgctg
     2761 gtacggcgag tacccggacg aagacctgcc gcgccgcatg gccgacgcgg acttcctggt
     2821 gctgccgtcg gtgacggtgg aggagatgtt cgggctggtg gtgctggagg cgatggccgc
     2881 ggggcggccg gtgatc
//
LOCUS       DASUYN010000077         2786 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1344994, whole genome shotgun sequence.
ACCESSION   DASUYN010000077 DASUYN010000000
VERSION     DASUYN010000077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2786)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2786)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2786
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1344994"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..633)
                     /locus_tag="VF061_01545"
     CDS             complement(<1..633)
                     /locus_tag="VF061_01545"
                     /inference="COORDINATES: protein motif:HMM:NF020892.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HEX6668209.1"
                     /translation="MPKFYLTTAIDYSNGDPHLGHALEKVGADCIARYRRLRGDDVHF
                     LMGMDEHSQAVVQAAEQNGRSPQEWVDLMAERFADFWARLQVSNDDWIRTTEARHREA
                     VTELLRRIESRNPEDLYVGDYEGLYCTGCEEFKQPAQIVNGRCIEHPTLELVPTRERN
                     HFFRLSRYRDPLLALIGSGEFAVEPAIRRNEVLRLLEAGLQDISISRQRMP"
     gene            complement(668..1684)
                     /gene="ricT"
                     /locus_tag="VF061_01550"
     CDS             complement(668..1684)
                     /gene="ricT"
                     /locus_tag="VF061_01550"
                     /inference="COORDINATES: protein motif:HMM:NF041131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="regulatory iron-sulfur-containing complex
                     subunit RicT"
                     /protein_id="HEX6668210.1"
                     /translation="MSQTVEVRFKGTRKAYFLWAGEEPLRVGEAVIVEAERGRDLGHV
                     TAAGELAEKKCGGCTGCSTTPVAEEPAPLKPVLARAAPEDVRSYEEVRRSEEDARRKV
                     MQRVRAHELAMKVSDTEWQWDRNKLTIYFTAEKRVDFRALVRDLASTFRTRIELRQIG
                     VRDEAARLSGVGRCGREYCCSSWLKELSPVNLGLAKDQHLSLNPTQISGGCGRLLCCL
                     KYEHDFYVAARKRFPKEGKTIRTALGPERVIAVDIFRERVFLRSEEHGSRIIPLLQLK
                     DEVERLGDVLVTAEYRARLAAETAAAAGGVPEGGGDGDGGGPARPERRRRRRSGGSGG
                     TPSP"
     gene            complement(1686..2648)
                     /locus_tag="VF061_01555"
     CDS             complement(1686..2648)
                     /locus_tag="VF061_01555"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HEX6668211.1"
                     /translation="MASAYTLEFEKPLLELERQIDDLKRIGSERQIDIEGELQGLQGK
                     LESLRAEIYRNLTPIQRVMVARHPRRPYTLDYLSTIFTDFIEMHGDRLYLDDPAIVGG
                     WARLGGNSVMVVGHQKGRDTKENLKRNFGMPHPEGYRKALRLMKLAAKFSAPVITLID
                     TPGAYPGLGAEERGQSEALARNILEMSLLPTPTIAVVIGEGGSGGALALGVADRILML
                     ENSVYSVISPEGCAAILWKDASQRERAAEALKITADDLLRLQLIDEIVKEPVGGAHLD
                     PDATGEALRDALIRHVTELKKLRTEKLVRRRAEKYAAMGVYSEA"
BASE COUNT          377 a          988 c          970 g          451 t
ORIGIN      
        1 cggcatgcgc tggcgtgaga tggagatgtc ctgcagtccg gcctcgagca gccgcaggac
       61 ttcgttgcgg cggatggccg gctccacggc gaactccccc gagccgatca gcgcgaggag
      121 cggatcgcgg tagcggctca gccggaagaa gtggttccgc tcccgggtgg gcaccagctc
      181 cagcgtcgga tgctcgatgc agcggccgtt cacgatctgg gccggctgct tgaattcctc
      241 gcagccggtg cagtagagcc cctcgtagtc gccgacgtag aggtcctcag ggttgcggct
      301 ctcgatccgc cggagcagct cggtgaccgc ctcgcggtgc cgcgcttcgg tggtccggat
      361 ccagtcgtcg ttgctcacct gcagccgggc ccagaagtcc gcgaagcgct ccgccatcag
      421 gtccacccac tcctggggcg agcggccgtt ctgctccgcc gcctgcacca ccgcctggga
      481 gtgctcgtcc atgcccatga ggaagtggac gtcgtctccc cggagacggc gatagcgcgc
      541 gatgcagtcg gcgccgacct tttccagcgc gtggccgaga tgggggtcgc cgttggagta
      601 atcgatggcg gtggtgaggt agaacttggg catgcgggaa agtaatgggg gaaggggcgt
      661 cgctcgctca gggtgacggc gtgccgccac tgcccccgct gcgccgccgc ctgcggcgct
      721 ccgggcgggc cggccccccg ccgtccccgt ccccgccccc ctccggcacg ccgcccgcgg
      781 ccgcggcggt ttccgcggcc agccgggcgc ggtactcggc ggtcaccagc acgtcgccca
      841 gccgctccac ctcgtccttc agctggagca gcggaatgat gcgcgatccg tgctcctcgc
      901 tccggaggaa cacccgctcg cggaagatgt ccaccgcgat cacccgctcg gggccgagcg
      961 cggtgcggat ggtcttccct tccttgggga atcgcttccg cgccgcgacg tagaagtcgt
     1021 gctcgtactt gaggcagcag agcaggcgcc cacagccgcc gctgatctgg gtgggattga
     1081 gcgagaggtg ctggtccttg gcgagaccga ggttgacggg cgagagctcc ttgagccagg
     1141 aggagcagca gtactcccga ccgcaacggc ccacgccgga gagccgggcc gcctcgtccc
     1201 gcacgccgat ctgccgcagc tcgatccggg tccggaaggt ggacgcgagg tcgcgcacca
     1261 gagcgcggaa gtcgacccgc ttctcggccg tgaagtagat ggtgagcttg ttgcgatccc
     1321 actgccactc ggtgtcgctc accttcatcg cgagctcgtg cgcccgcacc cgctgcatga
     1381 ccttccggcg ggcatcttcc tccgagcggc ggacctcctc gtacgacctg acgtcctccg
     1441 gcgccgcgcg cgcgagcacc ggcttgagcg gcgccggctc ctccgccacc ggggtcgtgg
     1501 agcaccccgt gcacccgccg cacttcttct cggccagctc cccggccgcg gtgacgtggc
     1561 cgagatcgcg gccgcgctcg gcctcgacga tgacggcctc gcccacccgc agcggctcct
     1621 ccccggccca caggaagtac gccttccggg tgcccttgaa gcgcacctcc actgtctggc
     1681 tcacctcagg cctcggagta gacgcccatc gcggcgtact tctcggcgcg acggcggacc
     1741 agcttctcgg tgcgcagctt cttgagctcg gtcacgtgac ggatgagggc gtcgcgcagc
     1801 gcctcgcccg tggcgtccgg gtccaggtgc gcgccgccga ctggctcctt gacgatctcg
     1861 tcgatgagct ggagccggag caggtcgtcc gccgtgatct tgagcgcctc cgccgcgcgc
     1921 tcccgctggc tcgcgtcttt ccagaggatg gcggcgcagc cctcgggcga gatcaccgag
     1981 tagaccgagt tctccagcat caggatccgg tcggctacgc ccagcgccag ggccccgccc
     2041 gagcccccct cgccgatcac gacggcgatc gtcggcgtcg ggagcagcga catctccagg
     2101 atgttgcggg ccagcgcctc ggactggccg cgttcctcgg cgccgaggcc ggggtaggcg
     2161 cccggagtgt cgatcagcgt gatgacgggg gccgagaact tggcggcgag cttcatcagg
     2221 cggagggcct tgcggtagcc ctcgggatgc ggcatcccga agttgcgctt caggttctcc
     2281 ttggtgtccc ggcccttctg gtggccgacc accatcaccg agttgccgcc gagccgggcc
     2341 cagcccccca cgatcgccgg atcgtccagg tacagccgat cgccgtgcat ctcgatgaag
     2401 tcggtgaaga tggtgctgag gtagtcgagg gtgtaggggc ggcgggggtg gcgggcgacc
     2461 atgacgcgct ggatcggcgt cagatttcgg tagatctcgg cccggaggga ctccagcttg
     2521 ccctggaggc cctgcagctc cccctcgatg tcgatctggc gctcgctgcc gatgcgcttg
     2581 aggtcgtcga tctggcgctc cagctcgagg agcggcttct cgaactccag cgtgtaggct
     2641 gaggccatcg aggtcatccc gccttgacgt agtggacgga atcggcgccc aggagatcgc
     2701 gcagggcgcg cacgaggtcc tcctccgccg cgacccggag gcggcgggac cggagtcgga
     2761 cggcctcacc gttgccgtcg ctccac
//
LOCUS       DASUYN010000078         2029 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_904639, whole genome shotgun sequence.
ACCESSION   DASUYN010000078 DASUYN010000000
VERSION     DASUYN010000078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2029
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_904639"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1132)
                     /locus_tag="VF061_01560"
     CDS             complement(<1..1132)
                     /locus_tag="VF061_01560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668212.1"
                     /translation="MHRCRPAIAGVFVALIGGLALPTSAPAQYFGRNQVQDESFDFEV
                     LQTEHFDVHYYPRERGAAEAAARMAERWYRRLSTVLRHELTGRQPLILYATAPEFQQN
                     NVVGGIGEGTGGVTEALRRRIVMPIGGTLRDLDHVLGHELVHAFQYDITGSGSPNTYG
                     ALPGASALPLWFVEGMAEYLSLGADAPLTAMWMRGGLEDTLPSYRDLLDPRFFPYRYG
                     QALLAYVAGRWGDQIMGDLLRAAGRSRNIDLGIQAVLVMTPDQLVSEWHAATYAAYGG
                     LRSVTQAADSAGVRIIAPDGGDDVGYNLAPSVSPDGERLMFLSDRDLFSIDLFLADAR
                     TGEVQRRITSTAIDAHLQSLQFIQSAGSWRADGRQFVFAGLAG"
     gene            complement(1310..1720)
                     /locus_tag="VF061_01565"
     CDS             complement(1310..1720)
                     /locus_tag="VF061_01565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668213.1"
                     /translation="MYTSATVRSLLAGLVLTAAAAPVQGQRVEAGVVVHSGPVAARVI
                     VRDGYSTYRRPVTRRVVVVERPRLVVVERIHRHRPARHWSRRGYRPITVYYWDGRYYD
                     RWIGHRPGVREVVVWERDGRYYDDGCDSDRHWDH"
     gene            complement(1784..>2029)
                     /locus_tag="VF061_01570"
     CDS             complement(1784..>2029)
                     /locus_tag="VF061_01570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668214.1"
                     /translation="FHSFLRRLRAGGRSNMYGAVPYLMRRFDLDRDTAFRVVCDWVDA
                     QDAAELIGAVTQETAPRLSPRTAAPASSARKRSRSRT"
BASE COUNT          323 a          681 c          735 g          290 t
ORIGIN      
        1 cgcccgcgag tccggcgaag acgaactgcc tcccgtccgc ccgccagctg ccagccgact
       61 gaatgaactg gaggctctgg aggtgggcgt cgatcgcggt ggaggtgatc cgccgctgaa
      121 cctcgccggt gcgggcatcg gccaggaaga gatcgatgga gaagagatcg cggtccgaga
      181 ggaacatcag ccgctcgccg tccgggctga cggagggtgc caggttgtag cccacgtcgt
      241 cgccgccgtc cggcgcgatg atgcggacgc cagcgctgtc ggcggcctgg gtgacgctcc
      301 gcaggccgcc gtacgcggca taggtggcgg cgtgccactc ggagaccagc tggtccggcg
      361 tcatgacgag caccgcctgg atccccagat cgatgttccg gctgcgtccc gccgcccgga
      421 gcaggtcgcc catgatctgg tctccccacc gcccggcgac ataggccagc agcgcctggc
      481 cgtagcgata ggggaagaag cgcgggtcca ggagatcccg gtacgagggc agcgtatcct
      541 ccaggcctcc gcgcatccac atcgcggtga gcggcgcgtc cgcaccgagc gagaggtact
      601 ccgccatgcc ctcgacgaac cagagcggga gggccgaggc gcccggcagc gcaccgtagg
      661 tgttggggct cccactgccg gtgatgtcat actggaacgc gtgcaccagc tcgtggccca
      721 ggacgtggtc gaggtcccgg agggtgccgc cgatcggcat cacgattcgc cggcggagcg
      781 cctcggtcac gccgccggtg ccctctccga tcccccccac gacgttgttc tgctgaaact
      841 ccggggcggt ggcatagagg atcagcggct gccggccggt gagctcgtgc cggagcacgg
      901 tgctgagccg gcggtaccag cgctcggcca tccgggcggc cgcctcggcg gcgccccgtt
      961 cccgggggta gtagtggaca tcgaagtgct ccgtctgcag cacttcgaag tcgaacgatt
     1021 cgtcttggac ctgattgcga ccgaagtact gggctggcgc ggacgtcggg agggcgagcc
     1081 ccccgatgag cgcgacgaag actccggcga tcgccgggcg gcagcggtgc attgatccga
     1141 cctcccacct gaacgatgca tagtccggcc cgggccgccg gtctgcggtg agccagttca
     1201 catggaccgc ggggaagccg ggaaaatgaa aatcccggcg ggtgccggga tttccattcc
     1261 tgggtctgcc tggatcgggg agatcgcgcg ccggaaggcg ccggacaggt cagtggtccc
     1321 agtgtcgatc ggagtcgcag ccgtcgtcgt agtagcggcc gtcgcgctcc catactacga
     1381 cctcgcggac gcccggccgg tgaccgatcc agcggtcgta gtagcggccg tcccagtagt
     1441 acacggtgat cgggcggtag ccccgccggc tccagtgcct cgccgggcga tggcggtgga
     1501 tccgctcgac caccaccagc cgcggccgct cgaccaccac gacgcggcgg gtgacgggtc
     1561 ggcggtaggt ggagtacccg tcgcgcacga tgacgcgcgc ggcgaccggc ccgctgtgca
     1621 ccaccacacc cgcctccaca cgctgcccct ggaccggagc agcggcggcg gtgagcacga
     1681 gaccggcgag caacgaccga acggtggcgc tggtgtacat atgaccctcg agttgggaac
     1741 gggtgaactg cggttcccca aaatgcgagg gccatgccac tcgctaagtt cttgagcggc
     1801 ttcgcttgcg cgcggagctc gcgggggccg ccgtcctcgg ggacagacgc ggcgcggtct
     1861 cctgggtgac ggcgccgatc aactctgcag catcttgcgc gtcgacccag tcgcacacca
     1921 cccgaaaggc ggtgtcgcga tcgagatcga agcggcgcat gaggtagggc accgcgccgt
     1981 acatgttgct gcggccgccg gcccggaggc ggcggaggaa gctgtggaa
//
LOCUS       DASUYN010000079         2630 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1565528, whole genome shotgun sequence.
ACCESSION   DASUYN010000079 DASUYN010000000
VERSION     DASUYN010000079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2630)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2630)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2630
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1565528"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..753)
                     /locus_tag="VF061_01575"
     CDS             complement(<1..753)
                     /locus_tag="VF061_01575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668215.1"
                     /translation="MRRLRIGVLDLVTKAPNRSLYARLMHANLASIMPQVISVWCEQE
                     GHDVRLVCYTGLEDLIQELPPDLDVLFIGAFTQSAQLAYALSSMFRRNGAVTVLGGPH
                     ARCYPEDARKYFDYVLGFTDRQVVSEVLRDAGPHRPLGRTVAAPRQPTDLPPLRERWK
                     FVAPTLAKAPTIKIVPMIGSLGCPYTCSFCIDSTVDYQPLSFPQLRDDLAFLLTKMKD
                     PIVGWHDPNFGVRFDDYMEAVEQAVPRGAMRPI"
     gene            complement(928..1614)
                     /locus_tag="VF061_01580"
     CDS             complement(928..1614)
                     /locus_tag="VF061_01580"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HEX6668216.1"
                     /translation="MTSPPEPHLAEPGSAPLIGATLAAGLMASALALALFVWLGIQIR
                     ADVPTFDLAGRANLRALEHPTLTTIMWGASVYGAPVRLSPLGLVAAAVFLSRGWRRGA
                     LLVVVTLAGAWAIDIALKLIFARARPEAFFGYYPAPESYSFPSGHALFAVCFFGGLAV
                     LLTHRLERRAAQVAVWLVAVGLILLIGVSRVYLGVHYPTDVVGGFAVGLVWVTAVAFG
                     DRLAEHHRRA"
     gene            complement(1799..>2630)
                     /locus_tag="VF061_01585"
     CDS             complement(1799..>2630)
                     /locus_tag="VF061_01585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668217.1"
                     /translation="KSSEGYLRVGVQAQVRRDDFLPQGSGLTFPRSVTGAFGPYLSWN
                     RARFLVTQGVAGFAREEDVDLGTTVRAGFNLAPKALGYERDGIAPSVSARAGAEIPGG
                     FGYVEALAGGLYTSAGLDSGVVQLAATAVTKPLPGHVAIVHAEAGWLESPLPGAEFDL
                     GLGSGPRAFRSHAFTGDRTVFATAEYRVTVVDDFLGLMGLGIAGFVDHGGAWYAGSPR
                     RLGWDAGLGLRVGASRASDTEALRFDLARRFANDAETGGWVVTVGKGFVFSSVGKRSL
                     "
BASE COUNT          426 a          937 c          929 g          338 t
ORIGIN      
        1 gatgggtcgc atcgcgcccc tcggcaccgc ctgctccacc gcctccatgt agtcgtcgaa
       61 gcgcaccccg aagttgggat cgtgccagcc gacgatcggg tccttcatct tggtcagcag
      121 gaaggccagg tcgtcccgca gctgcgggaa gctcagcggc tggtagtcca ccgtcgagtc
      181 gatgcagaag ctgcaggtgt aggggcagcc caggctcccg atcatcggca cgatcttgat
      241 cgtgggcgcc ttggcaaggg tgggcgccac gaacttccag cgttcgcgga gcggcgggag
      301 atccgtcggc tggcgcggtg ccgcgaccgt gcggccgagg ggacggtgcg gacccgcgtc
      361 acgcagaacc tcggagacga cctgccggtc ggtgaaaccg agcacgtagt cgaagtactt
      421 cctggcgtcc tcgggatagc accgcgcgtg gggtccgccc agcaccgtga cggcgccgtt
      481 ccgccggaac atgctgctca gcgcatacgc cagttgcgcc gactgcgtga acgcgccgat
      541 gaacagcacg tccagatcgg gcggcagctc ctggatcagg tcctcgagtc cggtgtagca
      601 gaccagccgg acgtcgtgcc cctcctgctc gcaccagacg ctgatgacct gcggcatgat
      661 gctggccagg ttggcatgca tcaggcgggc gtagagagag cggttcggag ccttggtgac
      721 cagatccagc acgcctatcc ggagtcggcg cattcggggt tcctcgtcga ggtgatgcca
      781 actcggcgtt gaggcgacgg atgtcgctag tggaaacggc tccggggtct ggtagggcga
      841 gcatcggccg cggtgcgcgg gccgccaggg tcgggaggcg ggtctaacaa tgctccgcgg
      901 cagcgcctaa ggcaaggcgg gatgtcctca ggcccgccgg tggtgctccg ccaggcggtc
      961 gccgaaggcc accgccgtca cccacaccag tccgacggcg aacccgccga cgacgtcggt
     1021 cggatagtgg acgccgagat agacgcggga gaccccgatg agcaggatga ggcccacggc
     1081 gacgagccag accgccacct gggcggcccg gcgctccagc ctgtgggtga gcagcaccgc
     1141 caggccgccg aagaagcaca ccgcgaagag ggcgtggccg ctgggaaagc tgtaggactc
     1201 gggcgcgggg tagtagccga agaaggcctc cggccgggcg cgcgcgaaaa tcagcttgag
     1261 ggcgatgtcg atcgcccacg ctccggccag cgtcaccacc acgagcaggg cgccgcggcg
     1321 ccagccccgg gagagaaaga ccgccgcggc caccagcccc aggggggaga ggcggacggg
     1381 cgcgccgtac acacttgccc cccacatgat cgtggtgagg gtgggatgct ccagcgcgcg
     1441 caggttcgcc cgcccggcca ggtcgaaggt ggggacgtcc gcgcgaatct gaatccccag
     1501 ccacacgaac agcgccagcg ccagcgccga ggccatcaac ccggccgcga gggtagcgcc
     1561 gatgagcggc gcgctccctg gctccgccag gtgtggctcg gggggcgacg tcatgtgcat
     1621 ggaatgcaat cacgccgccc cggtggcttc cggcaagccg agcggatacg ttgggggcat
     1681 gagccgattc cttctcccgc cgggcggccg gcgcggcatc acggtgctcg cgctggccct
     1741 cttgatcatc ggggtcgtcg tcctggtggt gctgctcagc cgctacgtcg cggtgtagtc
     1801 agagcgagcg cttcccgacc gaggagaaga cgaagccctt ccccacggtc accacccagc
     1861 ccccggtctc ggcgtcgttc gcgaagcggc gcgcgaggtc gaaccgcagg gcctcggtgt
     1921 ccgacgcgcg actcgcgccc acccggaggc ccagcccggc gtcccacccc agccggcgcg
     1981 gcgaccccgc gtaccatgcc ccaccgtggt ccacgaaccc cgcgatgccc agccccatca
     2041 ggccgaggaa gtcgtccacc accgtcaccc ggtactcggc cgtggcgaag accgtccggt
     2101 caccggtgaa ggcgtggctc cggaaggcac gggggccgga gccgagcccg aggtcgaact
     2161 ccgcgccggg gagcgggctc tccagccagc cggcctccgc gtgcacgatc gccacgtggc
     2221 cgggcaacgg cttggtcacc gccgtcgccg cgagctggac cacgcccgag tcgagtcccg
     2281 cggaggtgta cagcccaccg gccagcgcct cgacgtagcc gaagccgccc gggatctcgg
     2341 cgcccgcgcg cgccgacacc gacggggcga tcccatcgcg ctcgtagccc agcgccttgg
     2401 gcgccaggtt gaagcccgcc cgcaccgtgg tgccgagatc cacgtcctcc tcccgcgcga
     2461 accccgccac tccctgggtc accaggaacc tcgcccggtt ccacgagagg tacggaccga
     2521 acgcgccggt gaccgaccgg gggaaggtca ggcccgaccc ctggggcagg aagtcgtccc
     2581 gccgcacctg agcctggacg ccgacccgca ggtacccttc ggacgacttc
//
LOCUS       DASUYN010000080         2046 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_905140, whole genome shotgun sequence.
ACCESSION   DASUYN010000080 DASUYN010000000
VERSION     DASUYN010000080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2046
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_905140"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..888
                     /locus_tag="VF061_01590"
     CDS             <1..888
                     /locus_tag="VF061_01590"
                     /inference="COORDINATES: protein motif:HMM:NF020926.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-binding domain-containing protein"
                     /protein_id="HEX6668218.1"
                     /translation="GDRYLTRTGDFVAGRIALRSASADSVAVIDATSGEMLGNVEAER
                     AFSTVHPGAIYLHLGRSYEAAELDIGQRRAIVRPFEGDYYTQVKKETEVYVEQLQTQR
                     RVLGVELSFGAVSVSEQVIAYQRKRLGDNKVIDIISLDLPEQDFVTQALWYVIGDRMA
                     AALPSEVLLGALHASEHGQIAVLPLISMCDRWDIGGLSTNIHHQTGSPTIFIYDGHPG
                     GVGITRRGYEEFERLVGDADRLIRECPCDDGCPSCVQSPKCGNLNEHLHKGGALELMG
                     RMLREGVGSAAAADAKRRV"
     gene            896..1444
                     /locus_tag="VF061_01595"
     CDS             896..1444
                     /locus_tag="VF061_01595"
                     /inference="COORDINATES: protein motif:HMM:NF037785.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00725 family protein"
                     /protein_id="HEX6668219.1"
                     /translation="MTQRVQISVIGSSEGDERVLRDAEAVGRGIAEAGAVLVCGGLTG
                     VMEAASRGAAEAGGTVLAVLPTLDPADANPHVTLAIATGTGHARNLAVVASGAAVIAV
                     GGEWGTLSEIAYARKLGRPVVAIQSWTLRNRLGTDLGIVEAQTADEAVRAALSAAVVG
                     QSSKDRTEAADESLDRPEAGRS"
     gene            1544..1616
                     /locus_tag="VF061_01600"
     tRNA            1544..1616
                     /locus_tag="VF061_01600"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1577..1579,aa:Phe,seq:gaa)
BASE COUNT          362 a          686 c          712 g          286 t
ORIGIN      
        1 ggggatcgct acctgacccg aaccggggac ttcgtcgccg ggcggatcgc actgcgctcg
       61 gcctcggcgg acagcgtcgc ggtgatcgac gcaacatcag gggagatgct cgggaacgtc
      121 gaggccgagc gggccttctc gaccgtgcac cccggagcga tctacctcca cctcggccgc
      181 tcctacgagg ccgcggagct cgacatcggt caacgccggg cgatcgtgag gccgttcgag
      241 ggcgactact acacccaggt gaagaaggag accgaggtgt acgtcgagca gctccagacc
      301 cagcggcgcg tgcttggggt ggagctcagc ttcggcgccg tctcggtctc cgagcaggtg
      361 atcgcgtacc agcgaaagcg gctcggggac aacaaggtga tcgacatcat ctccctcgac
      421 ctccccgagc aggacttcgt cacccaggcc ctctggtacg tgatcggaga ccgaatggcc
      481 gcggcgctgc cgagcgaggt cctgctcggc gccctccacg cgtccgagca cggccagatc
      541 gccgtcctgc cgctgatctc gatgtgcgac cgctgggaca tcggcgggct ctccaccaac
      601 atccaccacc agaccggctc gccgacgatc ttcatctacg acggccaccc gggcggggtc
      661 ggaatcaccc gccgcggcta cgaggagttc gagcggctgg tcggcgacgc cgaccggctg
      721 atcagggagt gcccctgcga cgacggctgt ccctcctgcg tgcagagccc gaagtgcggc
      781 aacctgaacg agcacctgca caagggcggt gcgctcgaac tgatggggcg gatgctccgg
      841 gagggcgtcg gatccgccgc cgccgccgac gcgaagcgtc gggtatgaac ccaggatgac
      901 gcagcgggtc cagatctcgg tgattgggtc ctcggaggga gacgagcggg tcctccgcga
      961 tgccgaggcc gtaggccgag ggatcgcaga ggccggcgcg gtgctggtct gcggcgggct
     1021 caccggagtg atggaggccg cgtcgagggg cgccgccgag gcgggcggca cggttctagc
     1081 cgtcctccct acgctcgacc ccgccgacgc caacccgcat gtcaccctgg cgatcgccac
     1141 gggcaccggc catgcccgga acctcgcggt ggtcgcgtcg ggcgcggcgg tgatcgcggt
     1201 cggcggcgag tgggggacac tgtccgagat cgcctacgcg cgcaagctcg ggcggcctgt
     1261 cgtagcgatc cagagctgga cgctgcgcaa ccggctgggg accgacctcg gaatcgtcga
     1321 ggcccagacc gcggacgaag ccgtcagagc ggcgctgtcc gcggcggtgg tggggcagag
     1381 ctcgaaggac cgaacagagg cggccgatga gtccctcgac cggccggagg ccggccgaag
     1441 ctaggaggcc gggtagcggg tgcgcagcgc gaggaccgcg aacggctgcg accagccgag
     1501 cacgctccga accacggctc ggacgctagc ctttgcgcct ccgggcgagg tagctcagtt
     1561 ggtagagcac acgactgaaa atcgtggtgt cgccagttcg attctggccc tcgccataaa
     1621 tagctgcaaa tcagaagttt tctgaccact cctccgcagc aaacgcacca cgagtgggaa
     1681 tcctggtctt tccgtgcccc gactccctga ggcgagaggg ccgggtgcgg acaatccctc
     1741 gaactgggtg atgacaaatc acccaaccga cccggacgct gtgggcctca aatggcgcac
     1801 aaaggagggc aaaatagcca cgagagctct acggagactg gagattctgg tatggccact
     1861 gggtcgaggg caaggtccaa agccgctgac gagggcagtc ccgagaggcc ggagccgccg
     1921 ccgcgcgcac aatcgcagcg gaagccacaa tccgctgcag ctccgtcgcc gttccctccg
     1981 atcgccgatt acgcgttcct ctcgaactgc cataccggag cgctcgtagc acccgacggc
     2041 gccgtc
//
LOCUS       DASUYN010000081         3064 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_244004, whole genome shotgun sequence.
ACCESSION   DASUYN010000081 DASUYN010000000
VERSION     DASUYN010000081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3064
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_244004"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..992
                     /locus_tag="VF061_01605"
     CDS             <1..992
                     /locus_tag="VF061_01605"
                     /inference="COORDINATES: protein motif:HMM:NF024598.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="putative glycoside hydrolase"
                     /protein_id="HEX6668220.1"
                     /translation="KRFHELVRLADRTEINTFVVDVKDDTGYLTYRSEVPTAIAIGAN
                     QQLRARDVRDRLRIMRERGIFPVARIVVAKDPLLAAKRPQWSVQHVNGGLWRDRLDFA
                     WVDAFNDSVWIYAAELAAEAVRLGFAEVQYDYVRFPDEPESRLASALFPGRRPGETKR
                     QGVTRNLRLLRERTRDLDVPFTIDVFGLTTSARSDMGIGQYWEDLVTTADVVLPMVYP
                     SHYMRGVYNLKHPNSEPYQVIRRAMQDALRRSAPLGETAEIRPYLQAFTLGQPRYTPE
                     LVREQIRAAEELGLESWVLWNPRSAYDPGIFRPEVSSLSVGPEPAESPGPRTN"
     gene            1225..1611
                     /locus_tag="VF061_01610"
     CDS             1225..1611
                     /locus_tag="VF061_01610"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX6668221.1"
                     /translation="MHYRTRLGVLVAALALVSAGSAVAQEPAAAPAGVTPAAIAKGDT
                     IFHKSGLCYACHGANAEGTVGPSLVDAEWLHGDGSYDMLVATITAGIPAEKAKKGIPM
                     PPKGGSSITDEEVKAVAAYVYSLSHK"
     gene            1721..>3064
                     /locus_tag="VF061_01615"
     CDS             1721..>3064
                     /locus_tag="VF061_01615"
                     /inference="COORDINATES: protein motif:HMM:NF015168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HEX6668222.1"
                     /translation="MTSNRLAGAASAYLQSAAHQPIHWYPWGEDAFAAAQAQDRPVLL
                     DIGAVWCHWCHVMDGESYENPAIAQYLNEHFVCIKVDRDERPDVDARYQRAVQAFTRQ
                     GGWPLTAFLTPEGDVFYGGTYFPPDAKYGQPGFRTVLASVLDAYRSRRGQVQAQAQAI
                     RKVLETHLDESASGEASPALLKEAEERIAQMFDPVNGGFGSQPKFPHPGAVTFLLHRW
                     HEQRDERIREIIDRTLQGMARGGMHDQLGGGFHRYSVDAKWIVPHFEKMAYDNSELLK
                     AYLDAYAAFGTEEYAEVARGIVRWVRDVASEPEAGYAASQDADVGLEDDGDYFTWTRE
                     EAADVLAGDELDVATAYYDIGTAGEMHHNPGKNVLFVAAPLGTVARIAGLTEDATRLL
                     LASARKKLLEARNLRPAPFVDRTRYANWNAMMASAMLRAGAVLGDPWARHHALATL"
BASE COUNT          474 a         1105 c         1050 g          435 t
ORIGIN      
        1 ggaagcgctt ccacgagctg gtgcgactcg ccgaccggac cgagatcaac accttcgtgg
       61 tggacgtgaa ggacgacacg gggtacctga cgtaccgttc cgaggtcccc accgcgatcg
      121 cgatcggcgc caaccagcag ctccgcgcgc gtgacgtccg cgaccggctc cgcatcatgc
      181 gcgagcgggg catcttcccc gtcgcgcgca tcgtggtggc caaggatccg ctcctcgccg
      241 cgaagcggcc ccagtggtcg gtgcagcacg tgaacggcgg gctctggcgc gaccggctgg
      301 acttcgcctg ggtggacgcc ttcaacgact cggtgtggat ctacgcggcg gaactggccg
      361 cggaggccgt gcggctcggc ttcgccgagg tgcagtacga ctacgtgcgg ttccccgacg
      421 agccggagag ccggctcgcg agcgccctct tccccggccg gcggccgggc gagaccaagc
      481 gccagggcgt cacccgcaac cttcggctcc tgcgcgagcg cacccgggat ctcgacgtgc
      541 cgttcacgat tgacgtcttc gggctcacca ccagcgcgcg cagcgacatg ggcatcggcc
      601 agtattggga ggatctcgtc accacggcgg acgtggtgct ccccatggtg taccccagcc
      661 actacatgcg cggggtgtac aacctgaagc acccgaacag cgagccctat caggtgatcc
      721 gccgggcgat gcaggatgcc ctgcggcgct cggcccctct gggtgagacg gccgagatca
      781 ggccgtacct ccaggcgttc accctgggcc agccgcgcta caccccggag ctggtccggg
      841 agcagatccg cgccgcggag gagctgggcc tcgagagttg ggtgctgtgg aacccgcgga
      901 gcgcctacga tcccgggatc ttccgccccg aggtctcctc gctgagcgtg gggccggagc
      961 cggccgagag tcccggtccg aggacgaact gatccgaccc ggcgccatct ccggacaccc
     1021 ccatcgcccg gctcgccacc tatgtggcag ccgggccatc gcttagcagg taaagcctcc
     1081 ccggcccgcc gcttgcctcc caccgcttga ccggcttccg gccgggctta ttctcaatcg
     1141 attcgacttg tggattcagt caggggtgcc cctcccgccg tccggccggc agcggcgcgc
     1201 tcccattcgc cataggagca catgatgcac taccgcactc gcctcggcgt gctggtcgcc
     1261 gcgctcgcgc tggtgagcgc cgggtcggcc gtcgcgcagg agccggccgc cgcgccggcg
     1321 ggcgtcaccc cggccgccat cgccaagggc gacacgatct ttcacaagag cgggctgtgc
     1381 tatgcctgcc acggcgccaa cgccgaaggc acggtgggcc ccagcctggt agacgccgag
     1441 tggctccacg gcgacgggtc ctacgacatg ctcgtggcga cgatcacggc cggcatcccc
     1501 gcggagaagg cgaagaaggg cattccgatg cctcccaagg ggggcagctc gatcaccgac
     1561 gaggaggtga aggccgtcgc cgcctacgtg tactcgctga gccacaagta gcacggctcg
     1621 cttccgcagg gtcccgatcg gagggcgcgc cgcggtgcgc cctccgctgt ttcgggccgc
     1681 agatcaccga cgctcgtggg ccccgcggta actttcgcgc atgacctcca accgcctcgc
     1741 cggggccgcc tccgcctacc tgcagtccgc cgcacaccag ccgatccact ggtatccctg
     1801 gggcgaggac gcgttcgccg ccgcccaggc ccaggatcgc cccgtgctgc tcgacatcgg
     1861 agccgtgtgg tgccactggt gccacgtgat ggacggcgaa tcgtacgaga atcccgcgat
     1921 cgcccagtac ctcaacgagc acttcgtctg catcaaggtg gaccgcgatg agcggcccga
     1981 tgtggacgct cgctaccagc gcgcggtgca ggccttcacc cggcagggag gctggccgct
     2041 caccgccttc ctcacgcccg aaggcgacgt gttctacggc gggacctact ttccgcccga
     2101 cgcgaagtac gggcagcccg gcttccggac cgtgctcgcg agcgtgctcg acgcctaccg
     2161 ttcccggcgg ggtcaggttc aggcgcaggc gcaggcgatc cggaaggtcc tggagaccca
     2221 cctcgacgag agcgcatccg gggaggcttc ccccgccctg ctgaaggagg cggaggagcg
     2281 catcgcacag atgttcgatc cggtgaacgg cggattcggc agccagccga agttcccgca
     2341 cccgggcgcg gtcactttcc tgctccaccg ctggcacgag cagcgggacg agcgcatccg
     2401 cgagatcatc gaccggaccc tccagggcat ggcgcggggc gggatgcacg accagctcgg
     2461 cggcggcttc caccgctaca gcgtggacgc gaagtggatc gtgccccact tcgagaagat
     2521 ggcgtacgac aactcggagc tgctgaaggc gtacctcgac gcctacgccg ccttcggcac
     2581 cgaggagtac gccgaggtgg cgcgaggcat cgtgcgctgg gtgcgggacg tcgcctcgga
     2641 gccggaggcc ggctacgcgg cgagccagga cgccgacgtg ggactcgagg acgacgggga
     2701 ctacttcacc tggacccgcg aggaagccgc cgacgtgctc gccggcgacg agctggacgt
     2761 cgccaccgcc tattacgaca tcggcaccgc gggcgagatg caccacaatc cggggaagaa
     2821 cgtgctgttc gtggcggcgc cgctggggac ggtggcccgg atcgccgggc tcaccgagga
     2881 cgccacccgg ctgctcctcg cctccgcgcg aaagaagctg ctggaggccc ggaacctccg
     2941 ccccgcgccc ttcgtggacc gcacccggta cgcgaactgg aatgcgatga tggcctcggc
     3001 gatgctgcgg gccggcgcgg tgctgggcga cccctgggcc cggcaccatg ccctggccac
     3061 gctg
//
LOCUS       DASUYN010000082         3139 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1125921, whole genome shotgun sequence.
ACCESSION   DASUYN010000082 DASUYN010000000
VERSION     DASUYN010000082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3139)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3139)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3139
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1125921"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1267)
                     /locus_tag="VF061_01620"
     CDS             complement(<1..1267)
                     /locus_tag="VF061_01620"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX6668223.1"
                     /translation="MPRDLRFALRRLARAPGFAAAAILCLALGIGANTAIFSVINAVL
                     LRPLQHQEPERLVGLWESSQFRDTDRNSVSPANYQDWRSAGTSFSGMAAVYDGSASLT
                     GGGQPEEVSVQGATANLFEVLGISAEIGRSFIAADDAPGAAEVALLSHGLWRRRFSGD
                     PSIVGATIQLDGKPVTVVGVMPPWTESIGREPRPALWVPMRLDPARDYRETSGRYLQA
                     VGRLAPGVTVERAQADLATIAARLEAEYPDFNSGWSVNVIPLTEQIVGSVRRPLALLG
                     GVVLLVLLIACGNVANLMLAQATVRRRELAVHAALGASALALGRRLLVESLVIALAGG
                     VLGVLVAWWCTDALVALASGLPRTHEIGVDGAALAFTLAVSLAAGVGFGLVPAMHVAR
                     GDLHGDLKEGGRSSGGRGSRTRSLLVAAQV"
     gene            complement(1277..1975)
                     /locus_tag="VF061_01625"
     CDS             complement(1277..1975)
                     /locus_tag="VF061_01625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX6668224.1"
                     /translation="MADPLIRLEGIKKVFYTDEVETHALSDIHLEIKHGEYVAIAGPS
                     GCGKTTLLSILGLLDTPTEGTYTLDNQPVARLSASERARVRNRQIGFIFQAFNLIGDL
                     TVYENVELPLTYRGMASDERRKRVQSALERVGMSHRMKHFPAQLSGGQQQRVAVARAV
                     AGDPAILLADEPTGNLDSTNGEAVMELLRELHQGGATICMVTHDPRYARHADRSVHLF
                     DGKVVEERQLSAVS"
     gene            complement(2095..>3139)
                     /locus_tag="VF061_01630"
     CDS             complement(2095..>3139)
                     /locus_tag="VF061_01630"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HEX6668225.1"
                     /translation="PERIRYISAVTAGRVERRLAEPGQEVQPETVLLELSNPDVQLEA
                     LESERQLTVSQADRVNLQTDLKTQRLNQEAAVAAAKAAYQDAKRNAEAAQELVAKELI
                     STMEASRALDRVEELETRYRVEEERLAVMVGAADSQLALQRAQVGRLNAVAEFQRGRV
                     RSMKVLAGAHGILQELPLEVGQWAQSGATLARLVEPGKLKAVLRIPETQAKDIAIGQP
                     AKIDTRNGIVTGKVYRIDPAVQNGTVTVDVSLEGELPRGARPDLSVDGTIEVERLNDV
                     LHAGRPAYGQANSAVGLFRLTPDGSEATRVTVRLGRTSVNTVEILGGLEQGDKVIISD
                     MSRWDGHDRVRVD"
BASE COUNT          436 a         1136 c         1099 g          468 t
ORIGIN      
        1 ccacctgggc ggcgaccagc aagctccggg tccggctgcc gcggccgccc gacgaccggc
       61 cgccttcctt caggtctccg tgcaggtcgc cccgggcgac gtgcatcgcg ggcaccagcc
      121 cgaaaccgac cccggcggcg agggagacgg ccagcgtgaa ggcgagtgcc gccccgtcca
      181 cgccgatctc gtgggtgcgc gggaggcccg aggcgagcgc gaccagcgcg tcggtgcacc
      241 accaggccac cagcacgccg agtactccgc ccgcgagcgc gatcaccagg ctctccacca
      301 gcagtcgccg gcccagcgcg agggcgctcg cgccgagcgc cgcgtgcacc gccagctccc
      361 ggcggcgtac ggtcgcctgc gccagcatga ggttggccac gttgccacac gcgatcagca
      421 gcaccaggag caccaccccg ccgagcagcg ccagcggccg ccgcaccgag ccgacgatct
      481 gctccgtcag cgggatcacg ttcaccgacc agccgctgtt gaagtccgga tactccgctt
      541 ccagccgggc cgcgatcgtg gcgaggtcgg cctgggcccg ctccaccgtg acgccgggcg
      601 ccagccgacc caccgcctgc aggtagcgcc cgctggtctc ccggtaatcc cgcgccggat
      661 cgaggcgcat cggcacccag agagccggcc ggggctcccg cccgatggat tcggtccagg
      721 gcggcatgac gccgacgacg gtgaccggct tcccgtccag ctggatggtc gcgccgacga
      781 tcgagggatc gccggagaac cgccgccgcc agagcccgtg gctgaggagc gccacctccg
      841 ccgcccccgg cgcgtcgtcg gctgcgatga acgagcgccc gatctcggcg gagatgccga
      901 gcacctcgaa caggttcgcg gtcgccccct ggaccgatac ctcctccggc tgaccgccgc
      961 cggtcaggct ggcgctgccg tcgtacaccg cggccatgcc gctgaacgag gtgccagccg
     1021 accgccagtc ctggtagttg gcgggggaga cgctgttgcg gtcggtgtcg cggaactggc
     1081 tcgactccca gaggccgacg agccgctcgg gctcctggtg ctgcagcggc cgcaggagca
     1141 ccgcgttgat gacgctgaag atcgccgtgt tggccccgat cccgagggcg aggcagagga
     1201 tcgccgcggc ggcgaagccc ggtgcgcggg ccagccgccg cagcgcgaag cgcagatcgc
     1261 gtggcacgag agatcctcag ctgacggcgg agagctgccg ctcctcgacc accttgccgt
     1321 cgaagaggtg caccgagcgg tcggcgtgac gggcgtagcg cggatcgtgg gtcaccatgc
     1381 agatcgtggc tccgccctgg tgcagctccc tgagcagctc catcaccgct tcgccgttgg
     1441 tggaatcgag gttgccggtg ggctcgtccg cgagcaggat cgcgggatcg ccggccacgg
     1501 cgcgcgccac cgcgacgcgc tgctgctggc cgcccgagag ctgggccgga aagtgcttca
     1561 tccggtgcga catcccgacc cgctccaggg ccgactggac ccgcttgcgc cgctcgtccg
     1621 aggccatccc gcgataggtg agcggcagct cgacgttctc gtacaccgtg agatcgccga
     1681 tcaggttgaa ggcctggaag atgaagccga tctgccgatt ccggactcgc gcccgctcgg
     1741 aggccgagag ccgcgccacc ggctggttgt cgagggtgta ggtgccctcg gtgggcgtgt
     1801 cgagcagacc gagaatggag agcagcgtcg tcttgccgca gcccgacggt ccggcgatcg
     1861 cgacgtattc gccgtgcttg atctcgaggt ggatgtccga cagggcgtgg gtctcgactt
     1921 cgtcggtgta gaacaccttc ttgatgcctt ccagtcggat caggggatcg gccatgggcg
     1981 gtctcgggtt gagtgagggg ctgcgagcca cgaacaacgg gtcaaagcgt tcctacgagt
     2041 ggtcacgtcc gtgagtttga gcgcgcctgg agcccgctgc gcgtggcccg cagctcaatc
     2101 cactctcacg cggtcgtggc cgtcccagcg cgacatgtcg gagatgatga ccttgtcgcc
     2161 ctgctccagc ccgccgagga tctccaccgt gttgaccgac gtgcggccga ggcggacggt
     2221 gacgcgggtc gcctccgagc cgtcgggggt gagccggaac aggcccaccg cgctgttggc
     2281 ctggccgtac gcggggcgcc ccgcgtggag cacgtcgttc agccgctcca cttcgatcgt
     2341 gccgtccacc gagaggtcgg gccgggcgcc gcgcggcaac tcgccttcca gcgacacgtc
     2401 caccgtcacg gtgccgttct ggaccgcggg atcgatgcga tagaccttgc cggtcacgat
     2461 cccgttccgg gtgtcgatct tggccggctg gccgatggcg atgtccttcg cctgggtttc
     2521 ggggattcgg agcaccgcct tgagctttcc gggctccacc aggcgggcga gggtggcgcc
     2581 cgattgggcc cactgcccca cctcgagcgg aagctcctgg aggatgccgt gggcgcccgc
     2641 cagcaccttc atggagcgca cccggccgcg ctggaactcg gccacggcgt tcagtcgccc
     2701 cacctgcgcg cgttggagcg cgagctgcga atccgccgcg ccgaccatga cggcgagccg
     2761 ctcttcctcc acccggtagc gggtctccag ctcctccacc cggtcgagcg cgcggctcgc
     2821 ttccatggtg gagatgagct ccttcgccac cagctcctgc gccgcctcgg cgttgcgctt
     2881 ggcgtcctga tacgccgcct tggccgcggc gaccgcggcc tcctgattga ggcgctgggt
     2941 cttgagatcc gtctgcaggt tcacccggtc ggcctgggac acggtgagct gccgttccga
     3001 ctccagcgcc tcgagctgca cgtccgggtt gctcagctcg agcaggacgg tctcgggctg
     3061 gacctcctgc cccggttccg ccagacgccg ttcgacccga ccggccgtca ccgcggagat
     3121 gtagcggatg cgctccggc
//
LOCUS       DASUYN010000083         2023 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1125925, whole genome shotgun sequence.
ACCESSION   DASUYN010000083 DASUYN010000000
VERSION     DASUYN010000083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2023)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2023)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2023
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1125925"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..778)
                     /locus_tag="VF061_01635"
     CDS             complement(<1..778)
                     /locus_tag="VF061_01635"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX6668226.1"
                     /translation="MTVPTHERLAVALQERYRIERRPDGSLALLGRGGTATVYLAQDL
                     RHDRPVALKVVHPELAASVGTERFLREIRFVARLSHPHILPLFDSGEAGGLLYYVMPY
                     VPGESLRQRLERDGRVPVSSAVRIACQVGLALDYAHRHGVVHRDVKPENILLDGDQAI
                     VADFGIATAREAAADDRLTEAGLAVGTPAYMSPEQAGGAPQVDGRSDIYSLGCVLYEM
                     LAGLPPFTGPTPQAVMAQQVLATLSPVRGKRADVPEAVEGV"
     gene            complement(830..1345)
                     /locus_tag="VF061_01640"
     CDS             complement(830..1345)
                     /locus_tag="VF061_01640"
                     /inference="COORDINATES: protein motif:HMM:NF016213.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF456 domain-containing protein"
                     /protein_id="HEX6668227.1"
                     /translation="MPALDATTAFLLVLLTGLVGLALIPLGLPGLWVILLGILGFGWL
                     TDFRTLGTGLVVTVLGLALLGEAVEAYVGFRFAQRYGGSRRAGWGALVGGIIGAIVGV
                     PVPVIGSVIGGFLGAFAGAALFEYSKARRSEGAIWAGWGAVLGRALAAGVKMGVGIVM
                     LVIGLWAAVRA"
     gene            1455..>2023
                     /locus_tag="VF061_01645"
     CDS             1455..>2023
                     /locus_tag="VF061_01645"
                     /inference="COORDINATES: protein motif:HMM:NF013507.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668228.1"
                     /translation="MTRTRSKLRGAGDASTAALALLLVACGASPVADGTVAARWERRA
                     SAPEARTEVSVATDDSLIYLIGGFGPGEGRRPSAPRAMYAYDPAADRWSAAGEIPEGL
                     NHAGFAAAGGKLYIVGGFRGTTFAPTGAVRVYDPVERSWRDGTPMPTPRGALAVAVLD
                     GRIHAIGGNAATALGLQPHDHGTPERDRSV"
BASE COUNT          320 a          736 c          724 g          243 t
ORIGIN      
        1 ggaccccctc gaccgcctcg ggcacatccg cccgcttccc ccggacgggc gacagcgtcg
       61 cgagtacctg ctgggccatg accgcctgtg gcgtcggacc ggtgaagggc ggcaggccgg
      121 ccagcatctc gtagagcacg cagccgagac tgtagatgtc gctgcgcccg tccacctggg
      181 gcgcccctcc agcctgctcg gggctcatgt acgcaggcgt gcccacggcg agcccggcct
      241 cggtgaggcg gtcgtccgcg gcggcttcgc gggcggtggc gataccgaag tccgccacga
      301 tcgcctggtc gccatcgagc aggatgttct cgggcttgac gtcgcggtgg accacgccgt
      361 ggcggtgcgc gtagtccagc gcgagcccga cctggcaggc gatgcgcacc gcggacgaca
      421 ccggcacccg cccgtcgcgc tccagccgct ggcgcaggga ctcgcccggc acgtacggca
      481 tcacgtagta gagcaggccc ccggcctcgc cggagtcgaa gagcgggagg atgtgcgggt
      541 gcgagaggcg ggcgacgaag cggatctccc ggaggaaccg ctcggtcccc accgacgcgg
      601 ccagctccgg gtggaccacc ttgagcgcca ccgggcggtc gtgccgcaga tcctgggcga
      661 ggtagaccgt cgcggtgccg ccacggccca ggagcgcaag gctcccgtca ggccgccgct
      721 cgatccggta acgctcctgg agcgccaccg ctagacgctc gtgcgtgggc acggtcattg
      781 gacgtaccga aaactacacc gccgatcgcc ggttgtgcgt ggagacggcc taggcccgca
      841 ccgccgccca gaggccgatc accagcatca cgatccccac ccccatcttc accccggcag
      901 ccagcgcccg gccgagcacc gcgccccagc cggcccagat ggcgccctcg gagcgccgcg
      961 ccttggagta ctcgaagagc gcggcgccgg cgaacgcgcc gaggaacccg ccgatcaccg
     1021 acccgatgac cggcaccggc acccccacga tggcgccgat gatccccccc accaacgccc
     1081 cccaccccgc cctgcgggag ccgccgtagc gctgcgcgaa ccggaagccg acgtaggcct
     1141 cgaccgcctc gcccaggagc gcgagcccga ggacggtcac gacgagtccg gtgccgagcg
     1201 ttcggaagtc ggtcagccag ccgaagccga gaatgccgag caggatgacc cagagaccgg
     1261 ggaggccaag cgggatgagc gccagcccga ccagtccggt gaggaggacg aggagaaagg
     1321 cggtggtggc gtcgagggcg ggcatcaacg ggtgaagcga tggctgttgc gagaaacctg
     1381 ctccggaatc aacgtcatgc tgagcgagtg cctcctaggt gggtaaccct catccgcgga
     1441 gccggagaca gatgatgacc cggacgaggt ccaagctacg aggcgccggc gacgcgtcaa
     1501 ccgcggcatt ggcgcttctc ctcgtcgcct gcggcgcctc gcccgtggcc gacggcacgg
     1561 tggcggcgcg gtgggagcgc cgtgcatcgg ctccggaggc gcgcaccgaa gtgagcgtgg
     1621 cgaccgacga ctccctgatc tatctgatcg gcggcttcgg tcccggggag ggccgcagac
     1681 cctcggctcc gcgcgcgatg tacgcgtacg atcctgcggc cgaccgttgg agcgccgctg
     1741 gggagattcc cgaaggcctc aaccacgcag ggttcgccgc ggccgggggc aagctctaca
     1801 tcgtcggcgg atttcggggc acgaccttcg cacccacggg cgcggtgcgc gtctacgatc
     1861 cggtcgagcg cagctggcgc gacggcactc cgatgcccac cccgcgcggt gccctggcgg
     1921 ttgccgtgct ggatgggagg atccacgcga tcggcgggaa tgcggcgacc gcgctgggcc
     1981 tgcagcccca cgaccacggc accccggagc gggaccgctc ggt
//
LOCUS       DASUYN010000084         3843 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_685675, whole genome shotgun sequence.
ACCESSION   DASUYN010000084 DASUYN010000000
VERSION     DASUYN010000084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3843)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3843)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3843
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_685675"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(64..558)
                     /locus_tag="VF061_01650"
     CDS             complement(64..558)
                     /locus_tag="VF061_01650"
                     /inference="COORDINATES: protein motif:HMM:NF019499.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin K epoxide reductase family protein"
                     /protein_id="HEX6668229.1"
                     /translation="MSNPLRYRMAIAVLALVAALVALYLHLWKLGLVGSIACTANRGC
                     EVAMTSRWGWFLEVDVALIGVVGYAAILGVALWGAQPSRAWSPTPSLALLGLIVPAVL
                     FTIRLKWAEWVVLKTFCPWCFESTVTIVVCLLLALLDLRRVRRGEAGPSISPPPASVP
                     RTAR"
     gene            734..1186
                     /locus_tag="VF061_01655"
     CDS             734..1186
                     /locus_tag="VF061_01655"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HEX6668230.1"
                     /translation="MTLMTTRRPFENFQTLRRLNTVLDEAFSNWPFQQENGSITSSWY
                     PACDVFEDKEAVKIVAEVPGVKPEDVKLSLENNLLTIRGEKKQEAEERSERVHRYERS
                     YGAFERAFMLPSTVDGDKISAEYQNGILTILVPKAERARPREIPVKTA"
     gene            1286..2497
                     /gene="hemA"
                     /locus_tag="VF061_01660"
     CDS             1286..2497
                     /gene="hemA"
                     /locus_tag="VF061_01660"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: protein motif:HMM:TIGR01035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008883 - glutamyl-tRNA reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HEX6668231.1"
                     /translation="MLRDLPFHVVGLNHHTAGIQVREQVAFGQSEVAAWLQGQAAAGS
                     TALLLSTCNRCEIYWTGGPDLEAWFRDFAMTHGVAVGNALLRLDGEAAIRHLFDVTAG
                     LDSQILGETEVLGQVRRAYQAARAAGTSNRLIDTIVSAALVAGRRVRRETLLGRHPAS
                     VGSAAVDVAATFAPLAQTRALVIGAGEVAEGVLKALHGRTAGTALVNRRLERAAPLAS
                     AFGAVTGEWEVLDAMLAAADAIFVGTSAGTPVLDASQLAEAVGSSGRTIALFDLSVPR
                     NVDPGARDVPGVRLYDLDDLQRLRCPVEGFTSPTIAHARRVLEEELQRLNSELRARAA
                     APRLAELHRIAARLAEEEVDLALARLGPLSERDRQVVKQMAERLVRRVLYPVSRTVRA
                     GGGAPEVPAGS"
     gene            complement(2498..3613)
                     /gene="hemH"
                     /locus_tag="VF061_01665"
     CDS             complement(2498..3613)
                     /gene="hemH"
                     /locus_tag="VF061_01665"
                     /inference="COORDINATES: protein motif:HMM:TIGR00109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004325 - ferrochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HEX6668232.1"
                     /translation="MSKVKTGIVMMNLGGPATLDEVEPFLLELFADREIIQLPFQSWL
                     GPFIARRRTPRVKGLYATIGGGSPILRYTRAQGQGMVERLDRLSPDTAPHQFYVAFRY
                     VKPKSDDALRAMHADGVERAVAFTQYPQFSCSTTGSSLNELWRAASRTGLRDAFRWSI
                     IDRWPVHPGFIEAMTDAVREGLEGFDAAERDHAVLLFSAHSLPLSVIDRGDAYPQEVG
                     ATVQRVVERLGVTNPYVLAYQSEVGPVRWLGPSTEQVIRRLGARGEKRVLVIPIAFTS
                     DHIETLSELDREYGEVAHKVGITHYRRAPALNERPRFMDALADIVREHLVSGEVFSSQ
                     YPMRCPGCTNPQCRNVLNPAARATRRARGEKLRPVAG"
     gene            complement(3631..>3843)
                     /locus_tag="VF061_01670"
     CDS             complement(3631..>3843)
                     /locus_tag="VF061_01670"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HEX6668233.1"
                     /translation="AAGALAQLTARERQVLIGVAQGHTNREIAQQLGISHRTVESHRE
                     SLMKKLGVRTVAGLTRLALEAGLVRD"
BASE COUNT          589 a         1327 c         1344 g          583 t
ORIGIN      
        1 cgggctcacc tgctgacctc aagccggagg agagccgccc ggccatcgct caggtggagc
       61 ggctcatcgg gctgtacgag gaacggatgc gggcggcggc gaaatagacg gaccggcctc
      121 cccccgccgg acccggcgaa ggtccagcag tgcgagcagc aggcagacca cgatcgtcac
      181 cgtgctttcg aagcaccagg gacagaaggt cttcagcacc acccactcgg cccacttgag
      241 ccggatggtg aacaggacgg ccggcacgat gagcccgagc agcgccaggc tcggtgtcgg
      301 cgaccaggcc cgggacggtt gggctcccca gagggccacc cccagtatcg ccgcgtaccc
      361 caccaccccg atcagcgcga cgtccacctc gaggaaccat ccccagcggc tggtcatggc
      421 cacctcgcac ccgcggttgg cggtgcatgc aatcgatccc accagcccga gcttccagag
      481 atggaggtag agcgccacca gggcggcgac gagggcaagg acggcgatgg ccatccggta
      541 gcggagcggg ttcgacatgg cagaaatctc cccggccggc ggccgaagcg gcaaccctcc
      601 cgccggaggg tcggtcattt tggcaagcgc cagggcccta agtccggcac gcaggctgct
      661 ttaggaacgg gcgtgagccg ctgagcgagg cggctcgata ccccgcagac cttctgccac
      721 ttggaggcga acgatgacgc tgatgacgac ccgccggccc tttgaaaact tccagacctt
      781 gcgccggctc aacaccgtgc tggacgaggc cttctccaac tggcccttcc agcaggaaaa
      841 cggctcgatc acctcgtcct ggtacccggc ctgtgacgtg ttcgaggaca aggaggcggt
      901 gaagatcgtc gccgaagtgc ccggggtgaa gcccgaggac gtgaagctgt ccctcgagaa
      961 caacctgctc accattcgtg gtgagaagaa gcaggaggcc gaggagcgca gcgagcgggt
     1021 gcaccgctat gagcgtagct acggggcgtt cgagcgggcc ttcatgctcc ccagcaccgt
     1081 ggacggtgac aagatctccg cggagtacca gaacgggatc ctcaccatcc tcgtgcccaa
     1141 ggcggagcgg gctcgtcctc gggagatccc ggtcaagacg gcctgatcgc agtccccagc
     1201 cgggctccgt actccgtact cgtacggagc ccgttccggg gcatgtccgg attgccgtcc
     1261 ctccgggtcg gagtaacctt tggacatgct ccgcgacctg cctttccatg tcgttggtct
     1321 gaaccatcat acggcgggaa ttcaggtccg ggagcaagtg gccttcggcc agagcgaagt
     1381 cgcggcgtgg ctccagggcc aggccgcagc cggcagtacc gccctcctgc tttccacctg
     1441 caaccgctgt gagatctact ggaccggagg ccccgacctc gaggcctggt tccgcgactt
     1501 tgcgatgacc cacggtgtcg cggtgggtaa cgcgctgctg cgcctggatg gggaggcggc
     1561 gatccgtcac ctcttcgacg tcaccgccgg gctcgactcc cagatcctgg gagagactga
     1621 ggttctgggg caggtgcgcc gcgcctacca ggccgcccgc gccgcgggaa ccagcaaccg
     1681 gctgatcgat acgatcgtgt ccgccgctct cgtcgccggg cgccgggtcc ggcgggagac
     1741 gctgctgggc aggcaccccg cgtccgtcgg atcggcggcg gtcgacgtgg cggccacgtt
     1801 cgcaccgctg gcccagaccc gggcgctggt gatcggggcg ggggaagtgg ccgaaggggt
     1861 gctcaaggcg ctccatggcc ggacggcggg caccgcgctg gtgaatcgcc gcctggagcg
     1921 cgcggctcct ctcgcctccg ccttcggcgc ggtcacgggg gaatgggagg tgctcgacgc
     1981 gatgctcgcg gcggcggatg cgatcttcgt cggcacttcc gcgggcacgc cggtgctcga
     2041 tgcctcccag ctggccgagg ccgtcggcag cagcggccgg acgatcgctc tcttcgacct
     2101 gtcggtgccg cgcaacgtgg acccgggcgc tcgcgacgtc cccggggttc ggctctacga
     2161 cctcgacgat ctccagcggc tccgctgccc ggtcgagggc ttcacctccc ccaccatcgc
     2221 ccacgcgcgc cgcgtgctgg aggaggagtt gcagcgactg aactctgagc tccgggcccg
     2281 ggcggccgcc ccccgactgg cggagctgca ccgcatcgcg gctcgcctcg ccgaggagga
     2341 agtggacctc gccctggctc ggctggggcc gctgagcgag cgcgatcgtc aggtcgtcaa
     2401 gcagatggcc gagcggttgg tgcggcgggt gctgtatccc gtgagccgaa cggttcgtgc
     2461 aggaggcggg gcgccggagg tgcccgccgg ctcgtaatca ccccgcgacc ggtctgagct
     2521 tctcgccccg cgcgcgccgg gtggcccggg ccgcggggtt cagcacgttg cggcattgcg
     2581 ggttggtgca gccggggcaa cgcatcgggt actggctgct gaagacctcg ccggagacga
     2641 ggtgctcccg cacgatgtcg gcgagcgcgt ccatgaagcg gggccgctcg ttgagcgccg
     2701 gcgcgcgccg gtagtgcgtg atccccacct tgtgcgccac ttcgccgtac tcccgatcca
     2761 gttccgacaa cgtctcgatg tgatcgctgg tgaaggcgat cgggatgacc agcacccgct
     2821 tctcgccccg cgcccccagg cggcggatga cctgctcggt gctcggcccg agccagcgca
     2881 ccgggccgac ctccgactgg tacgcgagga cgtacggatt ggtcaccccc aggcgctcga
     2941 ccactcgctg taccgtggcg ccgacctcct gggggtaggc gtcgccccgg tcgatcacgc
     3001 tcaggggaag cgagtgcgcg ctgaagagca gcaccgcgtg gtcgcgctcc gccgcatcga
     3061 acccctccag gccttcccgc acggcgtccg tcatcgcctc gatgaacccc ggatgcaccg
     3121 gccaccggtc gatgatgctc caccggaacg cgtcccgcag ccccgtgcgg ctcgccgccc
     3181 gccagagctc gttcaggctg gagccggttg tgctgcagga gaactgggga tactgcgtga
     3241 aggcgacggc gcgctcgacg ccgtcggcat gcatcgcccg gagggcgtca tcgctcttcg
     3301 gcttgacgta ccggaaggcg acgtagaact ggtggggagc cgtgtcgggc gagagacggt
     3361 cgagccgctc gaccatgccc tgtccctggg ctcgggtgta gcgaaggatc ggcgagccgc
     3421 cgccgatggt ggcgtagagt cccttgaccc gcggggtgcg gcgccgcgcg atgaacgggc
     3481 cgagccagct ctggaacgga agctggatga tctcgcggtc ggcgaacagc tcgagcagga
     3541 acggctccac ctcgtcgagg gtggccggcc cgccgaggtt catcatcacg attccggtct
     3601 ttaccttgct catcgcgtca atataacggg ctagtcacgg accagtcccg cctccagcgc
     3661 gagccgggtg aggccggcga ccgtccgcac gccgagcttc ttcatcaggc tctcgcgatg
     3721 gctctccacc gtgcggtggc tgatgccgag ctgctgggcg atctcccggt tggtgtgtcc
     3781 ctgggccacg ccgatcaaca cctggcgctc ccgggccgtg agctgcgcga gggctccggc
     3841 ggc
//
LOCUS       DASUYN010000085         2468 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_686172, whole genome shotgun sequence.
ACCESSION   DASUYN010000085 DASUYN010000000
VERSION     DASUYN010000085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2468)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2468)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2468
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_686172"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..783
                     /locus_tag="VF061_01675"
     CDS             <1..783
                     /locus_tag="VF061_01675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668234.1"
                     /translation="AGHRVSTTCIGFGAQYNEDLLEAMARAGGGNYWYVEQHDQMAEI
                     FAGEIEGLVALAAQNVAVEVRLTDPRVAGVSFLQSYGVENTSEGGWRVRLHDLYATSP
                     KALGLVLHVEEVRELGKVQLGEVRVEADVVTETGIEHRTTVMPVLANLDGEDHVEPAV
                     EHTFLHFRAAKAREDAVRLADRGEFDRAASGLEAAAAALAPVAHDAGAVEEVEDLQRE
                     AGRLRARLYEAGDRKYQAARAMAARDLKADYAARVSRRPRNR"
     gene            complement(819..>2468)
                     /locus_tag="VF061_01680"
     CDS             complement(819..>2468)
                     /locus_tag="VF061_01680"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX6668235.1"
                     /translation="GQPPFTGPSAGAVLARQVLDPVPPITTLRPAVPGGVRQAVERAL
                     AKTPADRFGSVLEFLAALEAAEAPAAAPKQAIVVLPFANLSPDPDDAYFADGLMEEVI
                     ADLSRVRALTVISRTSSAKLKGTDWDLGRIGRELNVRYALEGSVRRAGSTLRITAQLI
                     DIERDAHLWADKYSGTVDDVFDLQERLSRQIVEALRITLSPPEDRELAERPIADIRAF
                     EYYQRARQEYYRYSSEGMAAARALAEHGLAVVGPHEALYGMPGTVHAWSATVLGGDEE
                     TTLREAEACARRAFELNPGSAQGLSIMGQVAYRRGQPGEAVRLLSQACAADPNNPDAM
                     HQLAGAYLLGGRIGPMREVLTRLVELDPLTASNHCLLGLSYSFGGDPVGALPSHRRAV
                     ELDPRSTICRVCEAVALVASGRETEASAQFAWLERQPPGDHLAAVGVRFRRGLTGIRA
                     AVLSPPSAAERAMAESDEYWSYLMASAYALVGETDQALGWLEHAVRVRGWVDYVYFTR
                     HDRFLERVRATPRFQELMAFARERHQRFTDDGAPVQTRLSP"
BASE COUNT          346 a          901 c          905 g          316 t
ORIGIN      
        1 gcggggcacc gcgtgagcac cacctgcatc ggcttcggcg cccagtacaa cgaggacctg
       61 ctcgaggcga tggcccgtgc cggcggcggc aactactggt acgtggagca gcacgaccag
      121 atggcggaga tcttcgcggg cgagatcgag ggcctcgtcg ccctggccgc ccagaacgtc
      181 gcggtcgagg tgcgcctcac tgatccgagg gtggccggcg tcagcttcct ccagtcctac
      241 ggggtggaga acacgtccga gggcggctgg cgcgtccggc tccacgatct ctacgccacc
      301 tcgccgaagg ccctcggcct cgtgctccac gtcgaggagg tgcgcgagct ggggaaggtg
      361 cagctcggcg aggtgcgggt cgaggccgac gtggtgaccg agacaggcat cgagcaccgc
      421 acgacggtca tgccggtact ggccaacctc gacggcgagg accacgtgga gccggcggtg
      481 gagcacacct tcctccactt ccgggccgcg aaggcccgcg aggacgcggt gcgcctggcg
      541 gaccggggcg agttcgaccg ggcggcctcg ggcctggagg cggctgcggc cgcgctggcg
      601 ccggtggcgc acgatgccgg ggcggtcgag gaggtcgagg acctgcagcg ggaggccggc
      661 cgcctgcggg cccggctcta cgaggccggc gaccggaagt accaggcggc ccgcgcgatg
      721 gccgcgcgag acctgaaggc cgattacgcg gccagggtga gccggcgacc gcggaaccgc
      781 tgagtccgga cgcgcgacac ctggtgcgag gggagtgctt agggtgacag gcgcgtttgg
      841 acgggagctc cgtcgtcggt gaagcgctgg tgccgctcgc gagcgaacgc catcagctcc
      901 tggaacctcg gcgtcgcccg cacccgctcg aggaaccggt cgtgccgggt gaagtacacg
      961 tagtccaccc acccgcgcac ccgcaccgcg tgctccagcc agcccagggc ctgatcggtc
     1021 tctcccacca gcgcgtacgc cgacgccatc aggtacgacc agtattcgtc cgactccgcc
     1081 atcgcgcgct ccgccgcgct cggcggcgac agcaccgccg cccggatgcc ggtgagcccc
     1141 cggcggaagc gtacgccgac cgccgccagg tggtcccccg gcggctggcg ctccagccac
     1201 gcgaactgtg cgctcgcctc cgtctcccgc cccgaggcca ccagcgccac cgcctcgcag
     1261 acgcggcaga tggtgctccg cggatccagc tcgaccgcgc gccggtgcga gggcaacgcc
     1321 ccgaccggat cgccgccgaa cgagtagctc agtcccagaa ggcagtggtt gctggccgtg
     1381 agcgggtcca gttccaccag gcgggtcagc acctcccgca tcggcccgat ccgcccgccc
     1441 agcaggtacg ccccggcgag ctggtgcatc gcgtcgggat tgttggggtc ggcggcgcag
     1501 gcctggctca gcagccggac ggcctccccc ggctgccctc ggcgataggc gacctgcccc
     1561 atgatcgaga ggccctgggc cgagcccggg ttcagctcga aggcgcggcg ggcacaggcc
     1621 tccgcctccc gcagggtggt ctcctcgtcg ccccccagca cggtcgccga ccacgcgtgc
     1681 accgtgcccg gcatcccata cagcgcctcg tggggcccca ccaccgccag cccgtgctcc
     1741 gcgagcgctc gtgccgccgc catcccttcc gaggagtagc ggtagtactc ctgccgcgcg
     1801 cgctggtagt actcgaacgc gcggatgtcg gcgatgggcc gctccgccag ctcgcggtct
     1861 tcgggtggtg acagggtgat gcgcagcgcc tcgacgatct ggcgcgacag ccgctcctgc
     1921 aggtcgaaca cgtcgtccac cgtccccgaa tacttgtcgg cccagaggtg ggcatcgcgc
     1981 tcgatgtcga tcagctgggc cgtgatccgg agggtggagc cggcccggcg gacgctgccc
     2041 tccagcgcgt agcggacgtt gagctcgcgg ccgatgcgcc cgaggtccca gtcggtgccc
     2101 ttcagcttgg ccgacgaggt ccgggagatc acggtgagcg cgcggacccg ggagaggtcg
     2161 gcgatcacct cctccatcag gccgtcggcg aagtacgcgt cgtcgggatc ggggctcagg
     2221 ttggcgaacg gcagcaccac gatggcctgc ttcggcgcgg cggcgggcgc ctcggccgcc
     2281 tcgagcgcgg ccaggaactc gagcaccgat ccgaaccggt cggccggcgt cttcgccagg
     2341 gcccgctcca ccgcctgccg caccccgccg ggcaccgctg gccggagcgt ggtgatgggc
     2401 ggcaccggat cgaggacctg gcgggccagc acggcgccgg cggaagggcc ggtgaagggc
     2461 ggctgacc
//
LOCUS       DASUYN010000086         2376 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1567962, whole genome shotgun sequence.
ACCESSION   DASUYN010000086 DASUYN010000000
VERSION     DASUYN010000086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2376)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2376)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2376
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1567962"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..315)
                     /locus_tag="VF061_01685"
     CDS             complement(<1..315)
                     /locus_tag="VF061_01685"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX6668236.1"
                     /translation="MARILVVEDSPDNMKLFRTLLTLKGHEVTGLPGGEQLLDTLAGS
                     EPDLVLMDIQLPGKDGFALLGEIRRSPHAALRVLALTAHAMSGDRERALQAGFDGYIT
                     KPI"
     gene            602..1450
                     /locus_tag="VF061_01690"
     CDS             602..1450
                     /locus_tag="VF061_01690"
                     /inference="COORDINATES: protein motif:HMM:NF014234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HEX6668237.1"
                     /translation="MRPSSLAVIGLGAIGGSLAWQARLAGIGRVVGYSPSRAEGVAAL
                     RASAVTEVADSPARAVRGAELVVLAVPPGATLDLIGRLADALEPGATLTDVCSVKAAV
                     MARAADCGLADRFAGGHPLAGTHDSGFSAARPDRLSGCVVYVCESDSADGARTARGVM
                     RFWEDVLEAHPVLIRAEAHDRQLAWTSHLPQAVAYALAKALADRQLGGVSYGAGARDT
                     TRLAASSPDMWRDILLQNRDPLAEALASIESRLGDLRRLIEAGDRDGLEQYLESAREF
                     RRGLDR"
     gene            1447..>2376
                     /locus_tag="VF061_01695"
     CDS             1447..>2376
                     /locus_tag="VF061_01695"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: protein motif:HMM:NF012497.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003866 - 3-phosphoshikimate
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HEX6668238.1"
                     /translation="MRVAGTVRAPGDKSITHRALLLGALAPGASHIGGALTSLDARSS
                     ARVLRQLGAEISPLRERDVVRIRGRRRFRAPDATLHCGNSGTTTRLLLGLLAGHRFRA
                     TLTGDASLRRRPMRRVTLPLGRMGARFEERGGDGLPLTVRGGALRSLRYELPVSSAQI
                     KSALLLAGVIGDVAVDLREPSGRSRDHTERMLQAFGYAVEEREGWIEFRPGGRIEPFD
                     IQIPGDPSSAAFLIGAAVLAEAGELCVAGVGVNPTRTGFLRVLRRMGATIRQEAADTS
                     FGEPVADLVAAPAALRSAEVLASEIPGLIDEIPM"
BASE COUNT          301 a          863 c          859 g          353 t
ORIGIN      
        1 gatcggcttg gtgatgtagc cgtcgaaccc ggcttgcagc gcccgctccc ggtcgccgct
       61 catggcgtgc gcggtgagcg ccagcacccg cagggcggcg tgcggcgacc gccggatctc
      121 gcccaagagg gcgaagccgt ccttgcccgg cagctggata tccatgagca ccaggtccgg
      181 ctcgctcccg gcgagggtgt ccagcagctg ctccccgccg ggcaacccgg tcacctcgtg
      241 acccttcaag gtcagcaggg tccggaacaa cttcatgttg tccgggctgt cttcgaccac
      301 caggattctc gccacgattc gcgctgtggg ggcaagatcc aagccaaccc ggcgccgggg
      361 tgagaaactt ccccaggctc acgagcttat gcgccgcctc cgcgcccggg cccgcgtccc
      421 cggcgaaaag gtcggcaccg gctttcgcag ggagtcgtgc gccccgagat ccaccgcgtt
      481 gagaatcgct cggcatatcg atacgttgcg ggcctattct cgatccatcg aacggcggcc
      541 gcagccgcct catcggggcg ggcggatgcg ccgggtttcg aactccaggg gtgcctgacc
      601 agtgcgccca tcctcgctgg ctgtgatcgg cctgggcgcg atcggtggct cgctcgcttg
      661 gcaggcccga ctggcgggga tcgggcgcgt ggtgggatac tcgccctccc gcgccgaagg
      721 ggttgccgcg ctcagggctt ccgccgtcac cgaggtcgct gattctcctg cccgggccgt
      781 gcgcggtgcg gagctcgtcg tcctggcggt gccgccaggt gcaacgctcg acctcatcgg
      841 ccgtctggcc gacgccctcg agcccggggc gaccctgacc gacgtctgca gcgtcaaggc
      901 ggcagtcatg gcccgcgcgg ccgactgcgg tctcgccgac cggttcgccg gcgggcaccc
      961 gctcgccggt acccacgact ccgggttctc cgcggctcgc cccgatcgcc tctccggctg
     1021 cgtggtctac gtctgcgaga gtgactccgc cgacggtgcc cggacggcgc ggggcgtgat
     1081 gcggttctgg gaggacgtgc tggaggccca tcccgtcctg atccgggcgg aggcgcacga
     1141 ccggcaactg gcgtggacca gtcaccttcc ccaggcggtg gcctacgccc tggccaaggc
     1201 gctcgccgac cggcagctgg gaggagtgtc gtacggcgcc ggggcccggg acacgacccg
     1261 actcgcggcg agcagtcccg acatgtggcg ggacatcctg ctgcagaaca gggatccgct
     1321 cgcggaggcg ctcgccagca tcgagagccg gctgggggat ctgcggcggc tgatcgaagc
     1381 cggggatcgg gacgggctcg agcagtacct cgagagcgct cgcgagttcc gccgcggcct
     1441 cgaccgatga gggtcgccgg caccgttcgc gcccccggcg acaagagcat cacccaccgg
     1501 gcgctgctgc tgggcgcgct cgcgccgggc gcgagtcata tcggcggcgc gctcacgtcc
     1561 ctcgatgccc gctcgagcgc ccgggtgctg cggcagctcg gcgccgagat ctcgccgctg
     1621 cgcgagcgcg acgtggtccg gatcaggggc cggcgccgct tccgcgctcc ggacgcgacg
     1681 ctccactgcg ggaactccgg gaccaccacc cgcctcctcc tcgggctcct cgccggccac
     1741 cgcttccgcg ccaccctcac cggcgatgcc tcgcttcgcc ggcgtcccat gcggcgggtc
     1801 accctgccgc tgggccggat gggggcacgg ttcgaggagc gcggcggcga cggcctgcca
     1861 ctcaccgtcc gcgggggagc cctccgttcc ctccgctacg agctgccggt ctccagcgcc
     1921 cagatcaaga gcgcgctcct cctcgcgggt gtgatcggcg acgtggccgt ggacctgcgg
     1981 gagccctcgg ggcgctcgcg cgatcacacc gagcgcatgc tgcaggcatt cggctacgcg
     2041 gtggaggagc gggagggatg gatcgagttc cgtcccggcg gccggatcga gccgttcgac
     2101 atccagattc ccggcgaccc ttcatcggcg gcgttcctga tcggcgccgc ggtcctggcg
     2161 gaggcgggag agctttgcgt cgcgggcgtc ggggtgaatc ccacccgcac gggattcctc
     2221 cgggtcctcc ggcggatggg tgcgacgatt cggcaggagg cggccgacac gagcttcgga
     2281 gagccggtgg cggacctggt ggcggccccc gcggcgctcc ggagcgccga ggtgctcgcg
     2341 agcgagatac ccgggctgat cgacgagatc cccatg
//
LOCUS       DASUYN010000087         3492 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_907133, whole genome shotgun sequence.
ACCESSION   DASUYN010000087 DASUYN010000000
VERSION     DASUYN010000087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3492)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3492)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3492
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_907133"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(171..1190)
                     /locus_tag="VF061_01700"
     CDS             complement(171..1190)
                     /locus_tag="VF061_01700"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008716 - D-alanine-D-alanine ligase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HEX6668239.1"
                     /translation="MRITVLTGGTSSERDVAIASAVQIVAALRSKGHEVAVVDTARGF
                     VPLADESRMLSASVGITPPSNDELLGLERGLLLSGLGNLAVVREADVLFLALHGGRGE
                     DGTIQTILDMVGVPYTGSGPLGSAVAMDKDVSKRLFRQAGVPTADWAMAPLPLADAEA
                     GFGWPLVVKPSKQGSTVGLTVVKEPGEYEPAVELARRYDDEVMVERFVPGRELTVGIL
                     EGRPLAVGEIIPRHEIFDYECKYTPGMSEEIFPADLPVPVARECQRLGLLAHEALKLG
                     GYSRVDFRLTPAGEALCLEVNTLPGMTATSLLPQSARAVGIEFPDLCERICRTARLGR
                     LQEPS"
     gene            complement(1326..2720)
                     /locus_tag="VF061_01705"
     CDS             complement(1326..2720)
                     /locus_tag="VF061_01705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HEX6668240.1"
                     /translation="MSATPPHRTPYDSVLETIGWTPLIRLGRIGAGIRTPIYGKAEYA
                     NPGGSVKDRIAMAIIEGAEQRGDLKPGGTIVEGTSGNTGVGLAIAASLKGYHCIFTMP
                     DKMSQEKVRLLKAYGAEVVITPTAVPPDHPDHYVMKAKQIVHETPGAVLADQFYNAAN
                     PEAHYRTTGPEIWAQTEGKVTHFVCGAGTGGTVSGAGKYLKEQNPKVRVIAGDPIGSL
                     YTHYHRTRTMGEGHPYKVEGIGGDKIPTTLWFDSIDEFRQVPDRTAFTMARRLAREEG
                     ILAGGSAGLAVWLALEIARELDSLDALIVTILADTGERYLSKLFNDEWMQENQMLEAP
                     RVTVEQLLERRPATAPALVSVAPSAAVRQALNLMSTYGVSQIPVVENGECVGGLIEGT
                     LMTRALAQPALLDRPVREVMEQPFPEVTADAPADRVGAMLSRESPATLVRKDGKLIGI
                     VSRYDVLQQLIGTR"
     gene            complement(2717..3133)
                     /locus_tag="VF061_01710"
     CDS             complement(2717..3133)
                     /locus_tag="VF061_01710"
                     /inference="COORDINATES: protein motif:HMM:NF015506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0031992 - energy transducer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HEX6668241.1"
                     /translation="MRRVLLAGTLAAAGLPGCGDRSVGTVALGDHQPAAAGSPADQPP
                     VAINPVTPMVYPPALLEQGIEGRVLLRLFADAQGKLIPDSIRVAESSGYPALDSAALT
                     GARELRFSPALRNGRPVSAPFLQPVHFRHPRSQGDP"
     gene            complement(3130..>3492)
                     /locus_tag="VF061_01715"
     CDS             complement(3130..>3492)
                     /locus_tag="VF061_01715"
                     /inference="COORDINATES: protein motif:HMM:NF012700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668242.1"
                     /translation="HARNYNVAVRESGDTVVFLHRLEPGGTDRSYGIHVAQLAGLPSD
                     VVARAREILGTLETEHRMVPGAPPPLERDEGQLPLFADAPPDPVVTDLKALDLDSLTP
                     LEALNRLAELQRRAQGKR"
BASE COUNT          505 a         1213 c         1221 g          553 t
ORIGIN      
        1 ccggcggggg agaaggccag cgcggaagcc agcgccggcg agatgaagat ggtccgcatc
       61 aacagcagca ccaccgcgtt cgcgatgatg agccgaagga cccagggagt gatacggctg
      121 gagggtgcga agttcatggg accgcctcta actctgagac tccaatacgg ttacgacggc
      181 tcctgcaggc ggcccagccg ggcggttcga cagatccgtt cgcacagatc ggggaactct
      241 atgcccaccg cccgggccga ttgggggagg aggctcgtgg ccgtcatccc gggcagcgta
      301 ttcacttcta aacagagggc ttctccggcc ggtgtcaagc gaaaatcgac tcgtgagtag
      361 ccgcccagct tcagtgcctc gtgggccagc agccccaggc gctggcactc cctcgcgacc
      421 ggcaccggca ggtcggccgg gaagatctct tccgacatgc cgggtgtgta cttgcactcg
      481 taatcgaaaa tttcgtgcct ggggatgatc tccccaacgg ccaggggccg accctccagg
      541 atgccgacgg tcagctcccg tcccgggacg aaccgctcga ccatcacctc gtcgtcgtag
      601 cgccgggcca gctccacggc gggctcgtat tccccgggct ccttcaccac cgtcaaccct
      661 acggtagacc cctgcttgga gggtttcacc accaggggcc atccgaagcc ggcctcggca
      721 tccgccagtg gcaggggcgc catcgcccag tcggccgtgg ggacgccggc ctgccgaaag
      781 agccgcttgg acacgtcctt gtccatggcc accgcgctgc ccagggggcc gctcccggtg
      841 tagggaacac ccaccatatc gaggatggtc tggatagtcc cgtcctcccc gcggccgcca
      901 tggagtgcaa gaaacagcac gtcggcctcc cgaaccaccg ccagatttcc cagccccgag
      961 agcaggagcc cccgctccag gccgagcagc tcgtcgttcg aggggggtgt tatccctacg
     1021 ctcgccgaga gcatccggct ctcgtccgcc agggggacga acccgcgggc ggtatcgacg
     1081 acggccacct cgtggccctt ggaccgcagc gcggcgacga tctggaccgc ggaggcgatg
     1141 gcgacgtcgc gctcggagga ggtgccgccg gtcaggacgg tgattcgcat gggcgtcgga
     1201 ggtgaccgtg gaatgtggtg ggagtcgggt ttcctggttg tcgcgctgag cgtagcgaag
     1261 gggccgaaag gcagccatgg tccccttcgc ttcgctcagg gtgacatctc ttttctcaac
     1321 gggacttacc gggtcccgat cagctgctgc agcacgtcgt accggctcac gatcccgatc
     1381 agcttcccgt ccttccgcac cagggtggcc gggctctcgc ggctcagcat cgcgcccacc
     1441 cggtcggctg gggcgtcggc cgtgacctcg gggaagggct gctccatcac ctcacgaacg
     1501 gggcggtcga gcagggcggg ctgggccagc gccctggtca tcagcgtgcc ttcgatcagc
     1561 ccgccgacgc actcgccgtt ctcgaccacc gggatctggc tcacgccata ggtgctcatc
     1621 aggttcagcg cctgccgcac cgcggccgac ggggcgacgc tcaccagggc cggtgcggtc
     1681 gccgggcgcc gctcgagcag ctgctcgacc gtgacccggg gtgcctccag catctggttc
     1741 tcctgcatcc actcgtcgtt gaacagcttg gagaggtacc gctcgccggt gtcggccagg
     1801 atggttacga tcagggcgtc gaggctgtcg agctcccgcg cgatctcgag ggccagccac
     1861 acggcgaggc ccgccgagcc gcccgccagg ataccctcct cccgcgccag ccgccgggcc
     1921 atggtgaagg cggtccggtc gggcacctgg cggaactcgt cgatggagtc gaaccacagc
     1981 gtcgtgggga tcttgtcgcc gccgatcccc tcgaccttgt aggggtggcc ctcgcccatc
     2041 gtcctggtcc gatggtagtg ggtgtagagc gagccgatcg gatcgccggc gatcacccgg
     2101 accttcggat tctgctcctt gaggtacttg cccgcgccgc tcaccgtccc gccggtgccg
     2161 gccccgcaga cgaagtgggt gaccttgccc tcggtctgcg cccagatctc gggcccggtc
     2221 gtccgatagt gcgcctcggg gttggcggcg ttgtagaact ggtccgcgag caccgcgccc
     2281 ggcgtctcgt gcacgatctg cttggccttc atcacgtaat ggtcgggatg gtcgggcggc
     2341 accgcggtcg gcgtgatcac gacctcggcg ccgtaggcct tgagcaggcg caccttctcc
     2401 tgcgacatct tgtcgggcat ggtgaagatg cagtggtagc ccttcaggct cgccgcgatc
     2461 gccagcccca cgccggtatt gccgctggtg ccctcaacga tggtcccgcc cggcttcagg
     2521 tcgccccgct gctccgcgcc ctcgatgatc gccatggcga tgcggtcctt caccgagccg
     2581 cccggattgg cgtactccgc cttgccgtag atcggcgtcc ggatgcccgc gccgatccgc
     2641 cccagccgga tcagcggggt ccacccgatc gtctcgagca ccgagtcgta cggcgtgcga
     2701 tggggagggg tggcgctcat gggtcgccct gggaccgggg atggcggaag tgcaccggct
     2761 ggaggaaggg cgccgagacc gggcggccgt tccgcagcgc cggcgagaag cgcagctcgc
     2821 gcgcgccggt gagcgccgcc gagtccaggg cggggtagcc actcgattcc gcgacgcgga
     2881 tggaatcggg gatcagcttg ccctgcgcgt ccgcgaagag acggaggagg acgcggccct
     2941 cgatgccctg ctccagcaac gccggcgggt agaccatcgg ggtgaccgga ttgatcgcca
     3001 ccggcggctg gtcggcgggg ctgccggcgg cggccggctg atggtcgccc agcgccacgg
     3061 tccccacgct ccggtccccg cagcctggga gcccggccgc ggcgagcgtt cccgccagca
     3121 ggacgcgtct catcgctttc cctgggccct gcgctggagc tcggcgaggc ggttgagcgc
     3181 ctccagcggc gtgaggctgt cgaggtccag cgccttgagg tcggtgacga ccggatcggg
     3241 aggcgcgtcg gcgaacagcg ggagctgacc ctcgtcgcgc tccagcggcg gcggcgcgcc
     3301 ggggaccatg cggtgctcgg tctccagcgt gccgaggatc tcgcgcgccc gcgccaccac
     3361 atcgctcggc aggccggcga gctgggccac gtggatgccg tacgagcggt cggtgccgcc
     3421 gggctcgagg cgatggagga agacgaccgt gtcgccgctc tcccggaccg ccacgttgta
     3481 gttccgggcg tg
//
LOCUS       DASUYN010000088         3401 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_686707, whole genome shotgun sequence.
ACCESSION   DASUYN010000088 DASUYN010000000
VERSION     DASUYN010000088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3401)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3401)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3401
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_686707"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(147..1763)
                     /locus_tag="VF061_01720"
     CDS             complement(147..1763)
                     /locus_tag="VF061_01720"
                     /inference="COORDINATES: protein motif:HMM:NF025690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4388 domain-containing protein"
                     /protein_id="HEX6668243.1"
                     /translation="MAIKGSLKEASLPDVIQLLFLGRRTGCLALADRHNFGTIYFDEG
                     HIVYAAIVNRRDRLGDLLVRSGRITAEQLQHAVDRQGGEREQKLGEILVQQGAISRDE
                     VQRYVRVQIEEAVYYLFTWNSGTFNFEAGVRPEREDFLVRINPEYLLLEGARRVDEWS
                     LIEKKIPSFDLIFAVDGGHIGESAPELSAEQRALVPLLDGTRDVTQVMEASGLVEFEV
                     GKALFGLITAGFARRVGTSAASAPRVNDSRVDEHRNLGIAFYKAAMLDEGLREFRRVA
                     ELRPADAGASFFLGLIALRQARWEEAAGSFRQALEKGGPRAPALHNLGVALERMGRLD
                     EAETAYADAAGRAREDARIMLGWAVTALRRGEYQVAQGRLGRARELFGAKPAPALWYW
                     AATLADIGQDDAEAARRTAEEGAATYPTSAVLGNNLAVLRELDGDAAGAEALLRAALA
                     EDASLPQISKNLADILYRHGRYDEAREAYERAAKLAPELGDDLYFKLGNIAYRRRDHE
                     RARESWRRATELNPGHELARANLEMLGVGS"
     gene            complement(1763..>3401)
                     /locus_tag="VF061_01725"
     CDS             complement(1763..>3401)
                     /locus_tag="VF061_01725"
                     /inference="COORDINATES: protein motif:HMM:NF012529.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DnaA/Hda family protein"
                     /protein_id="HEX6668244.1"
                     /translation="DRPPSEIEALDERLIRRFAGGLIIDVAAPDYETRVAILRRKAEE
                     RRASFAEGVLEAVAGLGIDNVRELLGALNRLVAHQAVSDRPLDPEQARALIGGAMAAA
                     AAAAATNGAVGPDPAEGGPAAAGAAGAAPAGLLADSGAPRPDEFSDFLSEVSATVAQQ
                     VDAWRAQIGAAVMRWEGEGYRTGRLQKLLEQDSVPDVAQALLEFERDVQRLRTMEAQT
                     AELAADLVGSPAFRDPGDLPAAESLLARAREGAVPPAAPSPLWRLADWVEGPAGRVAL
                     EASRAVVQEPGTRYNPLVVIGAAGVGKTHLLHALGNALAERGGGPVACLSAPEYSGEL
                     IAAIDRDAVGIWRSRYRRVSAFLLDDVHLIADTDRTQDELFLLYNVLLESGRQMIFTS
                     GVTLAELPGLEPRLRTRLEAGLVVELPVPDRELREQVARRELAAKGAVPDPALVEFFA
                     ARPADSVRVLLAQVHRVLNASEARNVAPTVALAREVLDGVTAGPPAEEPPAAQPRRSG
                     AHRTSGVVAATAGGARSREKMVWEWPDLADRLIEDWR"
BASE COUNT          439 a         1309 c         1191 g          462 t
ORIGIN      
        1 gtccgcatag gtgtgcacgc cgcacgcgcg catgcgcacc gcgatgcgcc ggcggacgca
       61 cttgtccttg taggcttgca gcgtgaagcc cgcgccctgg gagatcctgc gggccagggc
      121 ttcgaacccg gtgtcgtccg cggcgctcac gaccccaccc ccagcatctc cagattggcc
      181 cgggccagct cgtgccccgg attgagctcg gtggcgcggc gccagctctc gcgggcgcgc
      241 tcgtggtcgc gccgccgata ggcgatgttg ccgagcttga agtacaggtc gtcgcccagc
      301 tcgggggcga gcttcgcggc ccgctcgtag gcttcccgcg cctcgtcgta gcggccatgg
      361 cggtagagga tgtcggccag attcttggag atctggggca gcgacgcgtc ctccgcgagc
      421 gcggcgcgca gcagggcctc cgccccggcc gcgtcgccgt cgagctcccg aagcacggcg
      481 aggttgttgc ccagcacggc gctggtcggg tacgtcgcgg ccccctcctc tgccgtgcgg
      541 cgcgccgcct cggcgtcgtc ctggccgatg tcggccaggg tggccgccca gtaccacagg
      601 gccggggccg gcttggcgcc gaagagctcc cgggcgcggc ccaggcggcc ctgcgccacc
      661 tggtactcgc cccgccgcag cgccgtcacc gcccatccca gcatgatccg cgcgtcctcg
      721 cgggcccggc ccgcggcgtc ggcgtaggcc gtctcggctt cgtccagccg gcccatccgc
      781 tccagggcga cgcccaggtt gtgaagtgcc ggcgcccggg ggccgccctt ctccagcgcc
      841 tggcggaacg acccggctgc ttcctcccag cgcgcctgcc gcagggcgat gaggccgagg
      901 aagaacgacg cgccggcgtc ggcgggccgg agctccgcca cgcggcggaa ctcccggagg
      961 ccctcgtcca gcatcgccgc cttgtagaag gcgatcccca gatttcggtg ttcgtccacc
     1021 cggctgtcgt tcactctcgg cgcgctggcg gcggacgtgc ccacccgccg ggcgaacccc
     1081 gcggtgatca gaccgaagag ggccttcccc acctcgaact cgaccagccc gctcgcctcc
     1141 atcacctggg tcacgtcgcg ggttccgtcc agcagcggca ccagcgcccg ctgctccgcc
     1201 gagagttcgg gcgccgactc gccgatgtgg ccgccgtcca cggcgaagat gaggtcgaac
     1261 gaaggaatct tcttctcgat caggctccac tcgtccaccc ggcgcgcgcc ctcgaggagg
     1321 aggtattccg ggttgatccg caccaggaag tcctcgcgct ccggccgcac gccggcctcg
     1381 aagttgaagg tccccgagtt ccaggtgaac aggtagtaga ccgcctcctc gatctgcacg
     1441 cggacgtagc gctggacctc gtcccgggag atcgcgcctt gctggaccag gatctccccc
     1501 agcttctgct cccgctcccc gccctgccgg tccaccgcgt gctgcagctg ctcggccgta
     1561 atccgcccgc tccgcaccag gagatcgccc aggcggtcgc ggcggttcac gattgcggca
     1621 tagacgatgt ggccttcgtc gaagtagatc gtgccgaagt tgtgccggtc cgcgagggcc
     1681 aggcacccgg tgcgacgccc caggaagagc agctggatga cgtccgggag gctcgcctcc
     1741 ttcaggcttc ccttgatcgc catcagcgcc agtcctcgat cagccggtcg gcgaggtcgg
     1801 gccactccca gaccatcttc tcccggctcc gagccccgcc ggcggtggcg gcgacgaccc
     1861 cgctggtccg atgtgctccc gagcgccgag gctgcgcggc cggcggttcc tccgcgggtg
     1921 gtcccgcggt gacgccgtcg agcacctcgc gggcgagcgc caccgtggga gcaacgttgc
     1981 gggcctccga ggcattgagc acccggtgga cctgtgccag gagcacccgc accgaatccg
     2041 ccggccgggc ggcgaagaac tccaccagcg cggggtcggg caccgctcct ttcgccgcga
     2101 gctcccgccg ggcgacctgc tcgcgaagct cgcggtccgg caccggcagc tcgaccacga
     2161 gcccggcctc gagccgggtg cggagcctcg gctcgaggcc cggaagctcg gcgagcgtca
     2221 cgccggacgt gaagatcatc tgccgcccgg actcgagcag gacgttgtag agcaggaaca
     2281 gctcgtcctg ggtgcggtcg gtgtcggcaa tcaggtggac gtcgtcgagc aggaaggcgg
     2341 agacccggcg gtagcgggag cgccagatac cgaccgcatc acggtcgatg gcggcgatca
     2401 gctcaccgct gtactcgggc gcgctgagac aggccaccgg cccgcccccg cgctccgcga
     2461 gggcgttgcc gagggcgtgc agcaggtggg tcttgcccac gccggcggcg ccgatgacga
     2521 ccagcgggtt gtaccgcgtg cccggctcct ggaccaccgc gcgcgacgcc tcgagggcca
     2581 ctctcccggc cgggccttcc acccagtcgg ccagacgcca gaggggagac ggcgccgccg
     2641 gcggaaccgc gccttcccgc gcccgcgcga gcagcgattc cgccgcgggc agatcccccg
     2701 ggtcgcggaa cgcgggcgat cccaccaggt cggcggccag ctcggcggtc tgcgcctcca
     2761 tggtccggag ccgctgaacg tcgcgctcga actcgagcag cgcctgcgcg acgtccggca
     2821 ccgagtcctg ctccagcagc ttctgcagcc gtccggtgcg gtacccctca ccctcccagc
     2881 gcatgaccgc ggcgccgatc tgggcgcgcc acgcgtccac ctgctgggcc accgtggccg
     2941 agacctcgga aaggaaatcg gagaactcgt ccggccgcgg agccccggag tcggcgagga
     3001 gccctgccgg ggcggcccca gcggcgcccg ccgccgccgg acccccctcc gccgggtccg
     3061 ggcccaccgc gccgttggtg gcggccgccg ccgcggccgc cgccatcgcg ccgccgatca
     3121 gtgcccgggc ctgctccgga tccagcggcc gatcgctcac ggcctggtgg gcgaccaggc
     3181 ggttcagggc gccgaggagc tcgcgcacgt tgtcgatccc caggccggcg acggcctcga
     3241 gcacgccctc ggcgaacgag gcccgccgct cctccgcctt ccggcggagg atggcgacgc
     3301 gggtctcgta gtcgggcgcg gcgacgtcga tgatcagccc ccccgcgaac cgccggatca
     3361 gccgctcgtc gagcgcctcg atctccgagg gcgggcggtc g
//
LOCUS       DASUYN010000089         2380 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1789341, whole genome shotgun sequence.
ACCESSION   DASUYN010000089 DASUYN010000000
VERSION     DASUYN010000089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2380)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2380)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2380
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1789341"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            290..1294
                     /locus_tag="VF061_01730"
     CDS             290..1294
                     /locus_tag="VF061_01730"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M35 family metallo-endopeptidase"
                     /protein_id="HEX6668245.1"
                     /translation="MMPGALGRAQQYVSSTIAALGATPLAESTRTRLQWYFGSDSAST
                     AAAVASRLTCIGTAIQDTLTNSRFGCHPKDSSLAYVCVRGQAGSTAGSWQCADEQATI
                     CITRTFPRGDRARAEVLIHEHSHRIGLSAGSHPDIYAFRPRFPYMSTEQSLMNSDSIA
                     LFAGAMTEGIRVSRPSVIALSGGTAKGSDDEKTWLARLYLGTEFRHPVLAIFNPTLGI
                     GLTLIGDPRPAAPGVIPTPSLLASLVVGVRIEPRGPGRAPTPYLSLFGGPLVGLGAEG
                     VGVGHEVGAAAGFRWRSVDLSVGVGRTYDPVRAAGLDPNLFTAGVTLSFIPTIAGGRY
                     "
     gene            complement(1328..>2380)
                     /locus_tag="VF061_01735"
     CDS             complement(1328..>2380)
                     /locus_tag="VF061_01735"
                     /inference="COORDINATES: protein motif:HMM:NF044750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668246.1"
                     /translation="ADPAMRERLCSTWTVTLHHQTLASLAAALRRLGRPDAATLLDVA
                     AAQVRADFAQRLLVDGELAGFAYFHPDGRVDHLLHPRDRDTGIHHRLLPMIHAIVADL
                     LSPEQAAVHLALIRDHLLGVDGARLFDRPPAYQGGRQRHFQRAESSTFFGREIGLMYT
                     HAHLRYAEALARHGDADAFFEALRRAIPIGIQTVVAAAAPRQANCYYSSSDAAVADRY
                     EAAARYADVRAGRVPLEGGWRVYSSGAGIAVRLIHHCFLGLRRGRMTLGIDPVIPRAL
                     DGLCAEVGLSGHTVRVRYRVTAKGCGPIGLTLNGHALPMTREDNPYRTAGVTVPLARV
                     DEHLCAGVNDLLVTIE"
BASE COUNT          343 a          853 c          835 g          349 t
ORIGIN      
        1 gatactggat ccgtcatggg gagcgcgggg cctgtccccg gtgactcccg ctccgctgcc
       61 tgacaacgtc tccccttcgg cagtcgcgcc cccgcggtca ggaggccacg acttcggccg
      121 ggtacgggtt cactcgcctg ctcgggccgg ggcgatccag catgggcaag cggcgcccgg
      181 ggcccccccg gcgccgcccg ctcccgccca gccggcctgg ggccaggcct gttcgggagg
      241 agccaccgat ccttgccagc agactcgttg cacgccggcc gagacggcga tgatgccggg
      301 cgccctgggt cgggctcagc agtacgtcag cagcaccatc gccgcgctcg gcgccacccc
      361 gctcgcggag tccacgcgga ccaggctcca gtggtacttc ggctccgact ctgcgtcgac
      421 cgcggccgca gtggccagcc ggctgacctg tattgggacc gccatccagg acaccctcac
      481 caacagccgg ttcggctgcc atccgaagga cagcagcctg gcgtacgtct gcgtccgcgg
      541 ccaggcgggg tccacggcgg ggagctggca gtgcgccgac gagcaggcga cgatctgcat
      601 cacccggaca ttcccacgcg gtgaccgcgc ccgtgccgag gtcctgatcc acgagcattc
      661 ccaccggatc gggctgtccg ccggcagtca tcccgacatc tacgcgttcc ggccacgctt
      721 tccatacatg tcgaccgagc agtcgctcat gaacagcgat tccatcgcgc tgttcgccgg
      781 cgcgatgacg gaggggatcc gcgtctcgcg gcccagtgtg atcgccctgt cgggggggac
      841 cgcgaagggg tctgacgacg agaagacgtg gctggcccgc ctctatctcg gaaccgagtt
      901 ccggcacccg gtactggcga tcttcaaccc gactctcggc atcgggttga ccctcatcgg
      961 cgatccccga cctgccgccc ccggggtgat ccccaccccg agcctgctcg cctcgctggt
     1021 cgtcggggtg cgcatcgagc cacgtggccc cggcagggcg ccgactccat acctctccct
     1081 cttcggcggg ccgctggtgg ggcttggcgc cgagggggtt ggcgtggggc acgaggtcgg
     1141 cgcggcggcc ggcttccgct ggcgcagcgt cgatctctcg gtcggcgtcg gacgcaccta
     1201 cgatcccgtg cgcgccgccg gactggatcc caacctcttc accgccggcg tcaccctctc
     1261 cttcattcca acgatcgccg gtggccgcta ctgaaacccg ggatatcgag gcggaacccg
     1321 ctgcacctca ctcgatcgtg accaggagat cattcacccc ggcgcacagg tgctcgtcca
     1381 ccctggccag cgggacagtg acgcccgcgg tccggtatgg attgtcttcg cgcgtcatcg
     1441 gcaaggcgtg accgttcaac gtgagcccga tcggcccgca tcccttcgcg gtgacgcgat
     1501 agcgcactcg cacggtgtgg ccgctcagcc ctacctcggc acacaaaccg tccagggccc
     1561 tggggatcac cggatcgatg cccagcgtca tgcggccgcg gcggaggccg agaaagcagt
     1621 gatggatgag acggacggcg atgccggcgc cgctcgagta gacgcgccat ccgccttcga
     1681 gcggaacgcg gccggcccgc acgtccgcgt atcgcgcagc ggcctcgtag cggtccgcga
     1741 cggcggcgtc ggagctggag tagtaacagt tcgcctggcg tggcgcggcc gcggcgacga
     1801 cggtctggat gccgatcggg atggcgcggc gcagggcctc gaagaaggcg tccgcatcgc
     1861 cgtggcgggc cagggcctcc gcgtagcgca ggtgcgcgtg ggtatacatg aggccgatct
     1921 cgcggccgaa gaaggtactg ctctcggcgc gctggaagtg ccgctgccgc ccgccctggt
     1981 aggccggcgg ccggtcgaac aggcgcgcgc cgtcgacacc gagcaggtgg tcgcggatga
     2041 gtgccaggtg caccgccgcc tgctcgggcg agagcaggtc ggcgacgatg gcatggatca
     2101 tgggcagcag ccggtggtgg atgccggtgt ctcggtcccg cgggtgcagc aagtgatcga
     2161 cgcgcccgtc ggggtggaaa taggcgaaac cggcaagctc gccatcgacc agcagccgct
     2221 gcgcgaagtc ggcacggacc tgcgcggccg ccacgtccag cagcgttgcc gcatccggcc
     2281 tgccgaggcg tcgcaacgcc gcggcaagcg aggccagcgt ctggtggtgc agggtgacgg
     2341 tccaggtgct gcacagccgc tcgcgcatcg ccgggtcggc
//
LOCUS       DASUYN010000090         2475 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_467554, whole genome shotgun sequence.
ACCESSION   DASUYN010000090 DASUYN010000000
VERSION     DASUYN010000090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2475)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2475)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2475
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_467554"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..667)
                     /locus_tag="VF061_01740"
     CDS             complement(<1..667)
                     /locus_tag="VF061_01740"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX6668247.1"
                     /translation="MTAARKYDAIVVGAGQAGGPLSTALATAGRRTLLVEREHVGGTC
                     INEGCTPTKTMVASARVAYLARRGADYGVETGEVRVNLARVRERKRNIVESFRSGSQR
                     RLEDTRGLDLVFGEARFTAPRTVAVNGRSFEADLVFVNTGCRPAAPDVEGLAAIAPLD
                     STSIMELDRLPEHLIVLGGGYIGLEFGQMFRRFGSRVTVVQRGPQLLPLEDEDVAGAV
                     LGVL"
     gene            complement(761..2353)
                     /gene="cimA"
                     /locus_tag="VF061_01745"
     CDS             complement(761..2353)
                     /gene="cimA"
                     /locus_tag="VF061_01745"
                     /inference="COORDINATES: protein motif:HMM:TIGR00977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043714 - (R)-citramalate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citramalate synthase"
                     /protein_id="HEX6668248.1"
                     /translation="MPATDVSPIRLYDTPLRDGTQREGLSLSVEDKVKIARALDRLGV
                     HYIEGGWPGSNPKDAEFFRRMREEPPARARIAAFGSTRRAGARCEEDGNIAALEQAGT
                     PVVTLVGKTSTLHVDRVLETTWAENLRMIGESVAWFKRLGREVVYDAEHFFDGWRLDP
                     GYALATLHAAEESGADVVVLCDTNGGELPEIVAERVLELRERMGAALGIHPHDDAGLA
                     VANALAAVRAGCVQVQGTVNGYGERCGNLDLVPLIANLQLKLGHRLLADETLARLSEV
                     SHYVADVANQHPDPHAPYVGRSAFAHKGGIHVAAIAKVPESYQHVAPERVGNTCRVVV
                     SEVAGRRNVRLRARELGLAAGGEEGAVLQRIKELEHRGFQFEAAEGSFEMLLRRKDPG
                     YRAPFVVDDFTVIVEKRGGDGIRSQATVKLRVGDEVVHTAAEGDGPVNALDRAVRKAL
                     LPHYPALAEVHLVDYKVRIVDQHLGTAARPRVIIESARGAERWSTVGCSENIIEASWL
                     ALCDALELALLRSPAEAAVGSR"
BASE COUNT          341 a          901 c          886 g          347 t
ORIGIN      
        1 ggagcacgcc gagcaccgcg cccgccacgt cctcgtcctc cagtgggagg agctgggggc
       61 cgcgttgcac gaccgtgacc cggctgccga agcggcggaa catctggccg aactcgagac
      121 cgatgtagcc cccgccgagc acgatgaggt gctcggggag gcggtcgagc tccatgatgg
      181 aggtggagtc cagcggagcg atggcggcga ggccttccac gtccggcgcc gccgggcggc
      241 agccggtgtt cacgaacacc aggtccgcct cgaagctgcg gccgttcacc gccaccgttc
      301 gtggcgcggt gaagcgggcc tcgccgaaga ccaggtcgag ccccctggtg tcctcgagcc
      361 ggcgctggct gccgctccgg aagctctcga cgatgttgcg cttgcgctca cgcacccggg
      421 cgaggttcac ccggacctcg ccggtctcga ccccgtaatc cgcgccccgg cgcgcgaggt
      481 acgcgacccg ggcactggcc accatggtct tggtcggggt acaaccctcg ttgatgcagg
      541 tgccgccgac gtgctcgcgc tcgaccagca gcgtccgacg cccggcggtg gcgagggcgg
      601 tggacagggg tccgcccgcc tgaccggcac cgacgacgat ggcatcgtac ttccgggcag
      661 cggtcatcga accagtctgg tcgtgggagt tgtccgggcg ataccagagg ggaacgtcgc
      721 cgcccccggg aaggttccgc ccgcccggcc gggcgcggcc tcaccgggag ccgacggcgg
      781 cctcggccgg agaccggagc agggccagct ccagcgcatc gcagagcgcg agccagctgg
      841 cctcgatgat gttctccgag catcccacgg tgctccaccg ctccgccccg cgggccgact
      901 cgatgatcac ccggggacgg gccgcggtgc ccaggtgctg gtccacgatg cggaccttgt
      961 agtccaccag gtgcacctcg gccagcgcgg ggtaatgcgg cagcagcgcc ttccgcaccg
     1021 cccggtccag cgcgttgacc ggcccgtctc cctcggcggc ggtatgcacc acctcgtcgc
     1081 ccacccgcag cttgacggtg gcctgcgagc ggatcccgtc gccgccgcgc ttctccacga
     1141 tgacggtgaa atcgtccacc acgaacgggg cccggtagcc gggatccttc cgccggagga
     1201 gcatctcgaa cgacccctcc gccgcctcga actggaagcc gcggtgctcg agctccttga
     1261 tgcgctggag gacggcgcct tcctccccgc ccgcggcgag gccgagctcg cgggcgcgga
     1321 gccgcacgtt gcggcgaccg gccacctcgc tcaccaccac gcggcaggtg ttgccgaccc
     1381 gctccggggc cacgtgctga tagctctccg gcaccttggc gatcgcggcg acgtggatcc
     1441 cccccttatg ggcgaaggcg ctccgcccca cgtacggggc atgggggtcg ggatgctggt
     1501 tggcgacgtc cgccacgtag tgcgacacct cgctcaaccg ggcgagcgtc tcgtcggcca
     1561 ggaggcggtg gccgagcttg agctgcaggt tggcgatcag ggggacgagg tcgagattgc
     1621 cgcagcgctc cccgtacccg ttgacggtcc cctgcacctg cacgcagccg gcgcgcaccg
     1681 cggcgagggc gttggccacg gccagccccg cgtcgtcgtg agggtggata ccgagtgccg
     1741 cacccatccg ctcgcgcagc tcgagcacgc gctcggccac gatctcgggc agctcgccgc
     1801 cgttggtgtc gcagaggacc acgacgtcgg cgccggactc ctccgcggcg tggagggtgg
     1861 cgagggcgta gcccggatcg agtctccagc cgtcgaagaa gtgctccgcg tcgtacacca
     1921 cctcgcggcc gagccgcttg aaccaggcga cgctctcgcc gatcatgcgg aggttctccg
     1981 cccacgtcgt ctccagcacc cggtccacgt gcagggtgga ggtcttgccc accagggtga
     2041 cgaccggcgt gccggcctgc tccagcgccg cgatgttgcc gtcctcctcg cagcgggcgc
     2101 cggcccggcg ggtgctgccg aaggccgcga tcctggcgcg ggccggcggc tcctcccgca
     2161 tccgccgaaa gaactcggcg tccttgggat tcgagccggg ccagccgccc tcgatgtagt
     2221 gtaccccgag ccggtcgagg gcccgggcga tcttcacctt gtcctccacc gagagcgaga
     2281 ggccctcgcg ctgggtgccg tcgcgcaagg gggtgtcgta gagccggatg ggcgagacgt
     2341 ccgtggcggg catggggtcc ccggaaaagg aagcggcctc tcggggatcg agaggccgcg
     2401 ggtcggtgcc gatcgggtgg tcagctaccc gcaagctcgc gcgccgcctc tccaggagag
     2461 tcggagcccg agaat
//
LOCUS       DASUYN010000091         6056 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1128124, whole genome shotgun sequence.
ACCESSION   DASUYN010000091 DASUYN010000000
VERSION     DASUYN010000091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6056
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1128124"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            118..1578
                     /locus_tag="VF061_01750"
     CDS             118..1578
                     /locus_tag="VF061_01750"
                     /inference="COORDINATES: protein motif:HMM:NF012503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-dependent decarboxylase"
                     /protein_id="HEX6668249.1"
                     /translation="MIPPPEESLDPADWNELRALGHRMVDDMMDYLQGVRERPVWRPV
                     PAGTRAALDEPAPRGPTDPAEVYRQFREHILPYPNGNIHPRFWGWVMGTGTPLAMLAD
                     MLASGMNPHLAGYDQSPTLVERQVIRWMADLLGCPPESSGLLVSGGSVANLVGLAVAR
                     NTGAGFDVRAEGLQRADTPRLLVYGSSETHSWSRKACELLGLGDRALRRIPVDAEYRM
                     EIPALRAAIAEDRAAGHRPFCVIGNAGTVNTGATDDLRAIAALCREQALWFHVDGAFG
                     AFAALSPSLRGSVAGLEQADSIAVDLHKWGWLPFEVGLALVRHPEAHRATFATSSRYL
                     DATPRGIVAGGFPFADLGVQLSRGFRALKVWMSLKAHGADLWGRLVEQNVAQARHLRD
                     RILAEPRLELLAPAPLNVVCFRYRAPRLDGAALDAVNEEILLRVQERGIAVPSSTVLG
                     GRFALRVAITNHRSRREDFDLFADAVLAIGAELTAD"
     gene            1583..2710
                     /locus_tag="VF061_01755"
     CDS             1583..2710
                     /locus_tag="VF061_01755"
                     /inference="COORDINATES: protein motif:HMM:NF013237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX6668250.1"
                     /translation="MRLETLLVHAGRVPDPATGAVSPPIHLSTNFAREPDGSLPHGFL
                     YARSENPTRASLERALAPLEGGAVALVFASGMAATTALFQSLQAGDHVVAPTDAYYGT
                     AKVLREVFGRWGLATSFVTMTDAAAVERALTPRTRLLWIETPSNPALAVTDIAAVCAV
                     ARAAGALVVCDNTWATPLLQRPLELGADVVMHATTKYLAGHGDVTGGALVLREDGDLA
                     ARLRVVQTVGGAVPSPFDCWLVHRGMRTLAYRMRGHCDNAERVAAFLRDHRSVEIVHY
                     PGLADDPGHAVAARQMRRYGGMVSVRIRGGAAPARAVVSGVRLFTRATSLGGPESLIE
                     HRASSEGPGSTTPPGLLRMSIGLEHPDDLIEDLDQALAAAT"
     gene            complement(2722..3141)
                     /locus_tag="VF061_01760"
     CDS             complement(2722..3141)
                     /locus_tag="VF061_01760"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HEX6668251.1"
                     /translation="MFPRALGALSLILALSAGSASAQDTTAGGKEPVSSGRPLSEWVA
                     ELQAAAPSVRNAAAYEIASMGPAAAAAVPALIQALDDPNPTVRFPVTVALGEIGAGAK
                     AAVPRLQQMMLEEINDEIAAGARRAIRRIEPSALAGQ"
     gene            3298..4680
                     /locus_tag="VF061_01765"
     CDS             3298..4680
                     /locus_tag="VF061_01765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX6668252.1"
                     /translation="MTLRRLPSAFAAALVLLGPGPLPAQETGLATTYRAAADSLIRAA
                     TRDSAAYERIARLVDGFGHRQAGSRGLEAAIDWILAEMKKDGLQNVRGEPVQVTHWVR
                     GAESAVLVKPRLDTLHMLGLGGSVGTPKGGITAPVLVVTSFEELERRTAEARGRIVLF
                     DVPFTNYGDTRRYRSEGPSAAARAGAVACLIRSVASFSIRSPHTGRTVYDSLAPRIPA
                     AALSVEDAMMLHRMQQRGEPVVMTLTMGARQLPRARSRNVVAELVGRERPDEVVVLGG
                     HIDSWDVGQGAMDDAGGSVAAWEAVRLMKELGLVPRRTVRVVLWTNEENGVEGGRAYR
                     DAHRAELGRHVMAMESDAGTFEPTGFAFAGSDSAAALVRGAASLLGAVGATAVEHVPD
                     SPDADIAPLVEEGVPGIGLQVDDTRYFWYHHTDGDTLDKLDPAEVARCVAALAVMAYV
                     IADLPGGLPR"
     gene            4756..>6056
                     /locus_tag="VF061_01770"
     CDS             4756..>6056
                     /locus_tag="VF061_01770"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HEX6668253.1"
                     /translation="MLRHLALVLPALIDPPQVYHGRAGNLDVRLPRLEAEIEVDGQLG
                     EGVWRQAAVLTGFSQFSPSDGVPAADSTDVLVWYSPTAIHFGIRAWEAHGAVHATLAD
                     RDRIGADDHVQILLSTFNDGRQATVFAVNPYGVQSDGALVETGSTSGNGFNNAVVRRE
                     NADLSPDYIYQSKGRLTGQGYEIEVRIPFKSLRYQSAAEQSWGIHVTRQVQHSGYEDS
                     WAPARRASASFLAQSGRLVGLTDLRRGLVLDLNPSLTSHTTGRRNGTGWDYSGGSPEL
                     GGTARWGITNNLSLTGTANPDFSQVESDAGQLLFDPRDERFFQEKRPFFLDGIEQFTT
                     PNGLVYSRRVVQPVAAVKLTGKGLGTDIALLSAVDDPDVSPTRDHPFYNILRLQRDVG
                     ANSRVGMVYTDRIEGSDYNRVLGADARVVFGRIHTLQLQVAG"
BASE COUNT          811 a         2226 c         2163 g          856 t
ORIGIN      
        1 ggttggcgat cgacgggaaa agcgtgaacg gtgaagagtg aaaggtgaaa cggggggttc
       61 gacccccttt tcacttttca cctttcaccg ttcacgcttt tcccacagta ttctcccatg
      121 atcccacctc ccgaagaatc cctcgacccc gccgactgga acgagcttcg cgccctcggc
      181 caccgcatgg tggacgacat gatggactac ctccagggcg tgcgcgagcg gccggtgtgg
      241 cggccggtgc ccgccgggac ccgggcggcg ctggacgagc cggcgccgcg agggcccacc
      301 gaccccgcgg aggtgtaccg gcagttccgc gagcacatcc ttccctatcc caacggcaac
      361 attcacccgc gcttctgggg ctgggtgatg gggaccggaa cgccgctcgc gatgctcgcg
      421 gacatgctcg cctcggggat gaacccgcac ctcgccgggt acgaccagtc gcccacgctg
      481 gtggagcgtc aggtgatccg gtggatggcg gacctgctcg ggtgtccccc tgaatcgagc
      541 ggcctgctgg tcagcggcgg cagcgtcgcc aacctggtgg gtctcgcggt ggcacggaac
      601 acgggcgcgg ggttcgacgt gcgcgcggaa gggctgcagc gggcggacac gccgcggctc
      661 ctggtctacg gctccagcga gacccacagc tggtcgagga aggcgtgcga gctgctcggt
      721 ctgggcgacc gcgccctccg acgcattccg gtggacgccg agtaccggat ggagatcccg
      781 gccctgcggg cggcgatcgc cgaggaccgc gccgcggggc accggccgtt ctgcgtcatc
      841 gggaacgcgg ggacggtgaa caccggcgcc accgacgatc tgcgggccat cgccgcgctc
      901 tgccgcgagc aggcactctg gttccacgtg gacggcgcgt tcggcgcctt cgccgcgctg
      961 tccccctcgc tgcgcgggag tgtggcgggc ctggagcagg cggactcgat cgcggtggat
     1021 ctccacaagt ggggctggct gccgttcgag gtcggcctgg cgctggtgcg ccaccccgag
     1081 gctcaccggg ccaccttcgc cacctcgtcc cgctatctcg acgccacgcc gcgcggcatc
     1141 gtggcgggcg gatttccctt cgccgatctc ggcgtgcagc tttcccgggg attcagggcg
     1201 ctcaaggtgt ggatgtcgct caaggcgcac ggagccgacc tctggggccg gctggtcgag
     1261 cagaacgtcg cgcaggcgcg tcacctgcgg gaccggatcc tggcggagcc gaggctcgag
     1321 ctcctcgccc ccgcgccgct caacgtggtc tgcttccgct accgggcgcc ccggctggac
     1381 ggcgcggcgc tggacgcggt gaacgaggag atcctgctgc gggtgcagga gcgggggatc
     1441 gcggtcccct ccagtacggt gctcggcggg cggttcgcgc tccgagtcgc catcaccaat
     1501 caccggagcc ggcgggagga tttcgacctg ttcgcggacg cggtgctcgc gatcggggcg
     1561 gagctgacgg ccgactgacg ccatgcgcct cgagactctg ctcgtccacg ccggccgggt
     1621 gcccgatccc gccaccgggg ccgtgagccc gccgatccac ctctccacca atttcgcgcg
     1681 cgagcccgac ggctcgctgc cccacggctt cctctacgcc cggagcgaga atcccacccg
     1741 ggcgtcgctg gagcgcgcgc tcgccccgct ggagggcggt gcggtggcgc tcgtgttcgc
     1801 ctccggcatg gccgccacca ccgcgctgtt ccagtcgctg caggcgggcg accacgtggt
     1861 cgcgccgacc gacgcctact acggcaccgc gaaggtgctg cgcgaggtct tcgggcgctg
     1921 ggggctcgcg accagcttcg tgaccatgac cgatgccgcg gcggtggagc gcgccctcac
     1981 cccgcggacc cgcctgctct ggatcgagac gccctccaat cccgcgctcg cggtcaccga
     2041 catcgccgcg gtctgcgcgg tggcgcgggc cgcgggggcg ctcgtggtct gcgacaacac
     2101 ctgggccacg ccgctgctgc agcgcccgct cgagctcggc gccgacgtgg tgatgcacgc
     2161 caccaccaag tacctcgccg gccacggcga cgtcaccggg ggagccctgg tgctgcggga
     2221 ggacggcgac ctcgccgccc gactccgggt ggtgcagacg gtcggcggcg cggtaccctc
     2281 ccccttcgac tgctggctgg tccaccgggg catgcgtacg ctggcgtacc ggatgcgggg
     2341 gcactgcgac aacgccgaac gggtggcggc cttcctgcgg gaccatcggt cggtggagat
     2401 cgtacactat cccgggctgg cggacgaccc ggggcacgcg gtggcggcgc ggcagatgcg
     2461 ccgctacggc gggatggtgt cggtgcggat ccgcggcggg gctgctcccg ccagggcagt
     2521 ggtgtccggg gtccggctct tcacccgggc cacgagcctg ggcggccccg agagcctgat
     2581 cgagcaccgg gcgtccagcg aaggtcctgg cagcacgacg ccgcccggac tcctgcgcat
     2641 gtcgatcggc ctggagcacc cggacgacct gatcgaggac ctggaccagg cgctcgcggc
     2701 cgccacctga gccgcgccgc gctactgccc cgcgagcgcc gacggctcga tgcgtcggat
     2761 cgcgcgccgg gcgccggcgg cgatctcgtc gttgatctcc tcgagcatca tctgctggag
     2821 ccggggcacc gcggctttcg cgccggcgcc gatctcgccg agggccaccg tgaccgggaa
     2881 ccgcacggtc gggttcgggt cgtccagcgc ctggatcagc gccggcaccg cggccgcggc
     2941 cgccggtccc atgctggcga tctcgtacgc ggcggcgttg cggacggagg gggcggccgc
     3001 ctggagctcg gccacccact cgctgagggg gcgcccgctc gagacgggct ccttgccgcc
     3061 cgccgtggtg tcctgcgccg aggcgctgcc cgccgagaga gcgagaatga ggctgagggc
     3121 gccgagggcg cgaggaaaca tggagtcctc cagaggtcgt cgtcggtgat ccatccgcaa
     3181 tatagacccc tcggaacctc ggccgtttcc ggccgcggac tggcgcggcg cccggcatcc
     3241 gccgaagctt ccctgccgtt ggccggttcc ccgacccatc tccgtccgga ctcctccatg
     3301 accctgcgtc gtctgccgtc cgccttcgcc gccgcgctcg tcctcctcgg tcccggcccc
     3361 ctccccgccc aggagaccgg cctggccacc acctaccggg cggcggccga cagcctgatc
     3421 cgcgccgcca cccgggacag cgccgcttac gagcgcatcg cccgcctggt ggacgggttc
     3481 gggcaccgcc aggccggctc gcgcggcctg gaggcggcga tcgactggat cctggcggag
     3541 atgaagaagg acggcctgca gaacgtccgc ggcgagccgg tgcaggtgac ccactgggtc
     3601 cggggcgcag agtccgccgt cctggtgaag ccccggctcg acaccctcca catgctgggg
     3661 ctcggtggca gcgtgggcac gccgaagggc gggatcacgg ccccggtgct ggtggtcacc
     3721 agcttcgagg agctggagcg gcgcacggcg gaggcgcggg gccggatcgt gctcttcgac
     3781 gtgccgttca ccaactacgg cgacacccgc cgctaccgct ccgagggccc ttccgccgcc
     3841 gcccgcgcgg gcgcggtggc ctgcctgatc cgatcggtgg cctcgttctc catccggagt
     3901 ccccacaccg ggcggaccgt gtacgactcc ctcgcgcccc ggatccccgc cgccgccctg
     3961 agcgtggagg acgcgatgat gcttcaccgg atgcagcagc ggggcgagcc ggtcgtaatg
     4021 acgctgacga tgggggcccg ccagctcccg cgggcccggt cgcgcaacgt cgtggcggag
     4081 ctggtcggcc gggagcggcc ggacgaggtc gtggtgctcg gcgggcacat cgactcgtgg
     4141 gacgtgggac agggggcgat ggacgacgcc ggcgggtcgg tggccgcctg ggaggccgtg
     4201 cggctgatga aggagctggg tctcgtgccc cggcgcacgg tgcgcgtggt gctctggacc
     4261 aacgaggaga acggggtcga aggcgggcgg gcttaccgtg acgcgcaccg ggccgagctc
     4321 ggccgccatg tcatggcgat ggaatcggac gccggcacct tcgagcccac cggcttcgcc
     4381 ttcgcgggat ccgactccgc cgcggcgctg gtccgcgggg ccgcctcgct cctcggcgcc
     4441 gtcggcgcga ccgcggtgga gcacgtgccc gacagccccg acgccgacat cgcgccgctg
     4501 gtcgaggaag gcgtgcccgg catcggcctc caggtggacg acacgcggta cttctggtac
     4561 caccacaccg atggcgacac gctggacaag ctggacccgg cggaagtcgc ccggtgcgtc
     4621 gcggcgctgg cggtcatggc gtacgtgatc gcggatctgc cgggaggcct gccccgataa
     4681 tagaggagcg gggcagggcc gaaaccactc tcccgacgcc cccgtagacc tctatacccc
     4741 cgcgcgagag ctgcgatgct gcgccacctg gcgttggtcc tgcctgccct catcgatccg
     4801 ccccaggtct accacggccg cgccggaaac ctcgacgtcc ggctcccgag gctcgaggcg
     4861 gagatcgagg tggacgggca gctcggcgag ggggtctggc gccaggccgc cgtgctcacc
     4921 gggttctccc agttctcgcc gtccgacggg gtgcccgccg ccgattccac cgacgtgctg
     4981 gtgtggtact cccccaccgc catccacttc ggcatccgcg cctgggaggc gcacggcgcg
     5041 gtgcacgcca cgctcgccga ccgcgaccgg atcggcgccg acgatcacgt ccagatcctc
     5101 ctcagcacct tcaacgacgg ccgccaggcc accgtcttcg ccgtgaaccc gtacggcgtg
     5161 caatccgacg gcgccctggt ggagaccggc tccacctcgg gcaacgggtt caacaatgcc
     5221 gtggtgcggc gcgagaacgc ggacctcagc cccgactaca tctatcagtc caagggccgg
     5281 ctcaccgggc agggctacga gatcgaggtt cggatcccgt tcaagagcct gcgctaccaa
     5341 tcggcggcgg agcagagctg ggggatccac gtcacccgcc aggtgcagca ctccggctac
     5401 gaggactcct gggcgccggc gcggcgcgcg agcgcgtcgt tcctggccca gtcgggccgc
     5461 ctcgtcggtc tcaccgacct gcggcgcggc ctggtgctcg acctgaaccc gtcgctcacc
     5521 tcccacacca cggggcgccg gaacggcacc gggtgggatt acagcggcgg gagtcccgag
     5581 ctgggcggca ccgcccgctg gggcatcacc aacaacctga gcctcaccgg cacggcgaat
     5641 cccgacttca gccaggtgga gtccgacgcc ggccagctgc tgttcgaccc ccgcgacgag
     5701 cggttcttcc aggagaagcg cccctttttc ctcgacggga tcgagcagtt caccacgccc
     5761 aacggcctgg tctacagccg gcgggtggtg cagccggtcg ccgccgtcaa gctcaccggc
     5821 aagggcctcg gcaccgacat cgccctcctc tcggctgtgg acgaccccga cgtctccccg
     5881 acccgcgacc accccttcta caacatcctc cggctccagc gcgacgtcgg cgccaactcg
     5941 cgggtcggga tggtctacac cgaccggatc gagggcagcg actacaaccg ggtgctcggg
     6001 gccgacgcgc gcgtcgtctt cggccggatc cacacgctcc agcttcaggt ggccgg
//
LOCUS       DASUYN010000092         2930 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_25833, whole genome shotgun sequence.
ACCESSION   DASUYN010000092 DASUYN010000000
VERSION     DASUYN010000092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2930)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2930)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2930
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25833"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1421)
                     /locus_tag="VF061_01775"
     CDS             complement(<1..1421)
                     /locus_tag="VF061_01775"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX6668254.1"
                     /translation="MATDRDIAFPVLQPRDLAALSNRGTARDVRAGEVLFAEGDRNIG
                     FFVVLEGAVEIVERSRGTTHQVAVHQPGEFTGDVDTLSGRAVLVEGRAAVDGRVLQLE
                     QADLRRAVEELPELGETLLKAFLARRRLLLEEGFEGVRIIGSRFSPEAHRLRDFATRN
                     GIPFRFMDLETDAQAEALLRQFNVPASATPIVMDAEGEWHSNPSLADIGACMGMVQRM
                     DEGQVYDLVVVGAGPAGLAASVYAASEGLEVLVADEVAPGGQAGTSARIDNYLGFPEG
                     ISGRELIQRALLQAEKFGARITVPSTVRSLGVEGGERIVTFTDGSRLRARCVLVATGV
                     SYRRLEVPNFSDFERAGIYYAATEMEAKLCRGEDVVVVGGGNSAGQAVVYLAGIARHV
                     HLVVRRDDLTESMSRYLVDRIETLPNVTVHCGCTVAELEGNGRLHAVQVRKGSQGSRR
                     LEISSLFLFIGADANTDWLRGCVA"
     gene            complement(1431..2096)
                     /locus_tag="VF061_01780"
     CDS             complement(1431..2096)
                     /locus_tag="VF061_01780"
                     /inference="COORDINATES: protein motif:HMM:NF042734.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta family hydrolase"
                     /protein_id="HEX6668255.1"
                     /translation="MSALRLPVGGDVGDVSAILLRPDDAWGGYVLAHGAGAGMRHRFM
                     EAIAQALAARGMATLRYQFPYVEARSRRPDPPGVLEATVRAAVGRARELLPDLPLVAG
                     GKSMGGRMTSNAAAHRPLDGVRALVFLGFPLHPPRRPATSRAEHLERVEVPMLFFQGT
                     RDDLTDLGLMTGVCHRLGPRATLHVVEGADHGFSVLKRSGRTDAEVLDELAATITEWV
                     RRV"
     gene            complement(2093..>2930)
                     /locus_tag="VF061_01785"
     CDS             complement(2093..>2930)
                     /locus_tag="VF061_01785"
                     /inference="COORDINATES: protein motif:HMM:NF045432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668256.1"
                     /translation="YTKGDLLAYYRAVAPWLLPYLRNRPVVMTRYPDGIAGKSFFQKD
                     APGFRPGWIRTERMWSEDTQREIDYFVCDDQASLLYVVNLGTIPLHLWASRAPTLERP
                     DWCVLDLDPKGAPFEHVVELARAARALCDRIELPVMVKSTGSSGLHLMIPLGRQCTHE
                     QSRSLGELLARCLVDRLPEIATIVRQVHQRDGKVYVDYLQNGSGKLIVAPFSVRPLPG
                     APVSVPLEWREVNRKLDIRKHTIRTVPERMRKLKRDPLADVLELSPDLGHALGRLMEE
                     LR"
BASE COUNT          445 a         1064 c         1019 g          402 t
ORIGIN      
        1 gccacgcatc cccgcagcca atcggtgttc gcatcggcac cgatgaagag gaacagggag
       61 ctgatctcca ggcgccggct tccctgcgac cccttccgca cctgcaccgc gtgcaggcgt
      121 ccgttgccct ccagctcggc cacggtgcac ccgcagtgga cggtgacatt cggcagggtt
      181 tcgatgcggt ccaccaggta gcgcgacatg ctctcggtga gatcgtccct ccgcaccacg
      241 agatgtacat gtcgcgcgat gcccgcgagg tagacgaccg cctgcccggc cgagttgccg
      301 ccccccacga ccacgacgtc ctcgccgcgg cagagcttcg cctccatctc ggtggcggcg
      361 tagtagatgc cggcgcgctc gaagtcggag aagttgggca cctcgagccg ccggtaggac
      421 acgcccgtgg ccaccagcac gcagcgggcg cgcagccgac tgccgtccgt gaaggtgacg
      481 atccgctcgc ccccctcgac gccgagtgag cgcacggtgg atggcaccgt gatgcgggcg
      541 ccgaacttct ccgcctggag cagggcgcgc tggatcagct cccgtcccga gatgccctct
      601 ggaaagccga gatagttgtc gatccgcgcg ctggtgcccg cctggccgcc gggcgcgacc
      661 tcgtcggcca cgagtacctc gagaccttcc gaggccgcgt agaccgaggc ggcgagtccg
      721 gccggcccag cccccaccac caccaggtcg tagacctggc cttcgtccat ccgctgcacc
      781 atccccatgc acgcgccgat gtcggcgagc gatggattgc tgtgccactc gccctcggcg
      841 tccatcacga tgggcgtggc cgacgccggc acgttgaact gccggagcag cgcctccgcc
      901 tgggcgtccg tctccaggtc catgaagcgg aacgggatcc cgttccgggt cgcgaagtcg
      961 cgcaggcggt gggcctcggg agagaagcgg gagccgatga tgcggacgcc ctcgaacccc
     1021 tcctccagca ggagccgccg gcgcgccagg aaggccttga gcagggtctc gcccagctcg
     1081 ggcagctcct ccaccgcccg ccggaggtcg gcctgctcca gctggagcac ccgtccgtcc
     1141 accgccgccc tgccctcgac cagcacagcc cgtccggaga gggtgtccac gtcgccggtg
     1201 aactcccccg gctggtggac cgcgacctgg tgggtagtcc cccgggagcg ctcgacgatc
     1261 tcgaccgcgc cctcgagtac cacgaaaaag ccgatgttcc gatccccctc ggcgaagagg
     1321 acctctcccg cccggacgtc ccgcgcggtg ccccggttgc tcagcgcggc gaggtcgcgg
     1381 ggctggagca cggggaatgc gatgtctctg tcggtagcca tgcgcggaat ctagacccgt
     1441 cgcacccatt cggtgatcgt ggccgccagc tcgtccagca cctcggcgtc ggtccggccg
     1501 gagcgcttga ggacggagaa cccgtgatcg gcgccttcga ccacatgcag cgtggcccga
     1561 gggcccaggc ggtggcacac gccggtcatg aggccgagat cggtgaggtc gtcgcgggtg
     1621 ccctggaaaa agagcatcgg gacctccacc cgctccaggt gctcggcacg ggaggtggcg
     1681 ggacgcctgg gcggatggag gggaaagccc aggaacacga gcgcgcgaac gccgtccagg
     1741 gggcggtggg cggccgcgtt ggaggtcatc ctcccgccca tggacttgcc gcccgccacc
     1801 aggggcaggt cgggcagcag ctcgcgcgcc cggccgaccg cggcgcggac cgtggcctcg
     1861 agaacgccgg gcgggtcggg gcggcgcgac cgcgcctcga cgtagggaaa ctggtagcgc
     1921 agggtagcca tgccgcgggc ggccagcgcc tgggcgatgg cctccatgaa gcggtgccgc
     1981 atccccgccc cggccccgtg cgcgaggaca tacccgcccc acgcgtcgtc cgggcggagc
     2041 aggatggcgg agacgtcgcc gacgtcgccg ccgacgggga gccggagggc actcaccgca
     2101 gctcctccat cagtcggccc agcgcgtgtc ccagatccgg cgacagctcc agcacgtccg
     2161 ccagcggatc gcgcttcagc ttccgcatgc gctccggcac cgtccggatc gtgtgcttgc
     2221 ggatatcgag cttccggttc acctcgcgcc actccagcgg caccgacacc ggggcgcccg
     2281 gcagcggccg cacgctgaac ggggcgacga tcagcttgcc ggacccgttc tggaggtagt
     2341 ccacgtagac cttcccgtcc cgctgatgca cctggcgcac gatggtcgcg atctcgggga
     2401 gccggtccac caggcatcgc gccaggagct cgcccaggga ccgcgactgc tcgtgggtgc
     2461 actgccggcc cagcgggatc atcaggtgca gccccgagga gccggtgctc ttcaccatca
     2521 ccggcagctc gatccggtcg cacagcgccc tggccgcccg ggcgagctcg accacgtgct
     2581 cgaacggagc gcccttggga tccaggtcga gcacgcacca gtccggccgc tccagcgtcg
     2641 gggcgcggct ggcccagagg tggagcggga tggtgcccag gttgaccacg tagagcagcg
     2701 aggcctggtc gtcgcagacg aaataatcga tctcccgctg ggtgtcctcg ctccacatcc
     2761 gctcggtgcg gatccagccc gggcggaagc cgggcgcatc cttctggaag aacgacttgc
     2821 cggcgatgcc gtcgggatag cgggtcatga cgaccgggcg gttccgcagg tacggcagca
     2881 gccagggagc caccgcccgg tagtaggcga gcaggtcgcc cttggtgtag
//
LOCUS       DASUYN010000093         4415 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1348647, whole genome shotgun sequence.
ACCESSION   DASUYN010000093 DASUYN010000000
VERSION     DASUYN010000093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4415)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4415)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4415
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1348647"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2609)
                     /locus_tag="VF061_01790"
     CDS             complement(<1..2609)
                     /locus_tag="VF061_01790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668257.1"
                     /translation="MADLTFTVQALDKAVGTLLKVMAAVEKVGKSVDRLDGRIAKIGI
                     TADGAVKTEQALNGVDRKMKALDGKKATVKVDIDKSISDKLIVLDRLGSALKSLALPA
                     AAVALAPQIAALGAAAVSTTGALGVLPGVLGAIAVAGATVSMTFGHVWTALTGSDKKA
                     KEAMEKLNASGQDLVRTVRSLGPAWDELRTHVQNQMFTGLADQVRGLAATYLPMLRTE
                     MGKVGSVFNVALNSVGSFFRQKAVASDLHGALISIRTGITNVVLAARPLAQAFTDIFS
                     VSASRIPGLTKGVSDLALRFATFIRNARETGQLGQWIDQGIHTVKQLGAVVVNVGSSL
                     MSIFRAATAQGASLVDTLSEATGAMAAFLRSAQGQAALGAFFGAIRAAIDAIRPVIAA
                     VLPLAVELVKVLGTSLVTVFQQLSGPLTAVATALTNALLPVLGPIGDALADIVVAVTP
                     LVFELETLAPAFGEVAKAILAVLQAVGPFLSAFASTMMGALSLLTPALRLVAEVIQAI
                     APALEAVAGPIGAVVAGFLALKMAVGGITMVQAIITGLGVKLAESALNAGVFTEKITG
                     SANAGEKLAVAGGRLSTALGAVSTMFPIIAAAVIATALTYEQMRDKSEELATSVVNGQ
                     TRMSAAVQEHANRIQEQALVMEMASGQTEAMGQGIGELTGQLEANSNVVDANAQAQRE
                     MSAQIERQLSALPPLEQAQARVKIAQDAYNEAVRQFTANSPQAEAAAGNLALARDREK
                     IAADDAARAEKSLGDAITEASQAAAAAANADVAYQQGLLNLASAQDRAAETAKTHAAG
                     SRELQQANLQVMQANLQVADAARRKAEADAVATGATNVAQVGAQAYKDELIRLAAQAT
                     GPTRDALLAMANGT"
     gene            complement(2689..3033)
                     /locus_tag="VF061_01795"
     CDS             complement(2689..3033)
                     /locus_tag="VF061_01795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668258.1"
                     /translation="MKGALVEDYLTLRINGEEHKIDLNPDNFTAGELNGVERNTGMAW
                     YEWFTKLADRRVSSLAWTALAWIAVRRAGSFVPFDEFEDSIKVMELVASANPNEAAPA
                     AEAAQRKRRSTK"
     gene            complement(3238..3792)
                     /locus_tag="VF061_01800"
     CDS             complement(3238..3792)
                     /locus_tag="VF061_01800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668259.1"
                     /translation="MPTAAAKAEIQMKAGGANKFREVSRRLRKAGRGDLQRELTKAVR
                     KEGAPALAAVKAAWLGVQVESLDPDRGGTARPDTSTGLRRRVARATRMRVRQNGITIV
                     VEGRRVDPEYPTLATYLNGFPRRRPWRHPVFGTGKRGSWQGAWAAQRGQEVFWPTLNE
                     FRPQWRRGIEGATNRFVAELDRGL"
     gene            complement(3805..4080)
                     /locus_tag="VF061_01805"
     CDS             complement(3805..4080)
                     /locus_tag="VF061_01805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668260.1"
                     /translation="MFLGWDSDDRDKALWWLLHQRQACPSCGTRPDVFAEDPHAYVAE
                     PHHCRGCEIQAQGDEWLERHRKEVRRGTTMRLVPAAQATPAVDTAET"
     gene            complement(4140..>4415)
                     /locus_tag="VF061_01810"
     CDS             complement(4140..>4415)
                     /locus_tag="VF061_01810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668261.1"
                     /translation="TLPPPEWEALIELHPATEEQQGQGMMWNPTTFRPALLAACVVTP
                     DGDDPMSAEDWEQAAKESLSAGEYNALCNAAVNLNFRAPASAVGNGS"
BASE COUNT          610 a         1538 c         1553 g          714 t
ORIGIN      
        1 gtgccgttcg ccatggcgag cagcgcgtcc cgggtggggc cggtggcctg cgcggcgagg
       61 cggatcagct cgtccttgta tgcctgcgcc ccgacctgcg cgacgttcgt ggccccggtg
      121 gcgaccgcgt ccgcctcggc cttccgccgg gccgcgtccg cgacctggag gttggcctgc
      181 atcacctgga ggttcgcctg ctgtagctcc cgggacccgg ccgcgtgggt cttcgcggtc
      241 tccgcggccc ggtcctgcgc tgacgcgagg ttgagcaatc cctgctggta ggcgacgtcc
      301 gcgttcgccg cggctgccgc cgcctgggat gcctcggtga tggcgtcccc gagggacttc
      361 tccgcccgcg ccgcgtcgtc tgcggcgatc ttctcccggt cccgggcgag ggcaaggttc
      421 ccggccgcgg cctcggcctg cggcgagttc gcggtgaact gccggaccgc ctcgttgtag
      481 gcgtcctgcg cgatcttcac ccgggcctgg gcctgctcca gcggcgggag cgcggagagc
      541 tgccgctcga tctgcgcgga catctcccgc tgagcctgcg cattcgcgtc gaccacgttg
      601 gagttcgctt cgagctgacc ggtgagttcc ccgatgccct gccccatggc ctcggtctgc
      661 cccgatgcca tctccatgac gagggcctgc tcctggatgc ggttcgcgtg ctcctgcacc
      721 gcggcggaca ttcgggtctg cccgttgacc acggaggtgg cgagttcctc ggacttgtcc
      781 cgcatctgct cgtaggtcag ggcggtggcg atgaccgcag ccgcgatgat ggggaacatc
      841 gtggacacgg caccgagggc ggtggagagg cggccaccgg cgacggcgag cttctccccc
      901 gcgttcgcgc tcccggtgat cttctcggtg aacaccccgg cgttgagcgc ggactccgcg
      961 agcttgacgc cgagcccggt gatgatggcc tgcaccatcg tgatcccgcc gacggccatc
     1021 ttcaacgcga ggaacccggc gacgacggcc ccgatcggac cggccaccgc ctccagcgcg
     1081 ggggcgatcg cctggatcac ctccgcgacg aggcggagcg cgggggtgag cagggagagg
     1141 gcgcccatca tggtggacgc gaacgcggac aggaacgggc ccaccgcctg gaggaccgcg
     1201 aggatcgcct tcgccacctc gccgaacgcg ggcgccagcg tctccagctc gaacaccagc
     1261 ggggtcaccg ctaccacgat gtccgcgagg gcgtccccga tcgggccgag caccgggagc
     1321 agcgcgttcg tgagcgccgt cgcgaccgcg gtgagcggac cggacaactg ctggaacacc
     1381 gtcaccaggc tcgtcccgag gaccttcacc agctccacgg cgagcgggag gaccgcggcg
     1441 atcaccggcc tgatcgcgtc gatggcggcc cggatggcgc cgaagaacgc gcccaacgct
     1501 gcctgcccct gcgcggagcg gaggaacgcg gccatcgccc cggtcgcctc ggacagcgtg
     1561 tccacgaggg acgcgccctg cgcagtcgcc gcccggaata tcgacatgag cgacgacccg
     1621 acgttgacca cgaccgcgcc gagctgcttg accgtgtgaa tgccctggtc gatccactgc
     1681 ccgagctgcc cggtctcccg ggcgttccgg atgaacgtgg cgaaccggag cgccagatcc
     1741 gagacgccct tggtgagccc ggggatccgg gacgcggaga cggagaagat gtccgtgaac
     1801 gcctgcgcca gtggccgggc ggcgaggacc acgttggtga tccccgtccg gatgctgatc
     1861 agcgcgccgt ggaggtcgga ggcgacggcc ttctgccgga agaacgatcc gacggagttg
     1921 agcgccacgt tgaagacgga cccgaccttg cccatctccg tgcggagcat ggggaggtag
     1981 gtggcggcga gcccgcggac ctggtcggcg agaccggtga acatctggtt ctgcacgtgg
     2041 gtgcgcagct cgtcccaggc cgggccgagt gaccggacgg tgcggacgag gtcctggccg
     2101 gaggcgttga gcttctccat cgcctctttg gccttcttgt ccgacccggt gagcgcggtc
     2161 cagacgtggc cgaaggtcat ggagacggtg gcgcccgcga cggcaatagc gccgagcacc
     2221 ccggggagca cgccgagggc cccggtcgtg gagacggcgg cggcaccgag ggcggcgatc
     2281 tggggggcaa gcgcgacggc ggcggcgggg agagctaggg acttgagcgc ggacccgagc
     2341 cggtcgagca cgatcaactt gtcactgatc gacttgtcga tgtcgacctt gacggtggcc
     2401 ttcttgccgt cgagcgcctt catcttgcgg tcgacaccgt tgagcgcctg ctcggtcttc
     2461 accgccccgt cggcggtgat cccgatcttc gcgatacgac cgtcgagccg gtcaacggac
     2521 ttgccgacct tctccaccgc ggccatgacc ttgagcaagg tgccgacagc cttgtcgagc
     2581 gcctgcacgg tgaaggtcag atcagccacg gggaaagccg cccctctcta gttcctgatc
     2641 acgcaggggg agaggggcgg cggcgcgcga gctagtaggg gcggggggtc acttggtgct
     2701 gcgccgcttt cgctgcgccg cctcggcggc gggtgcggcc tcgttcgggt tggcggacgc
     2761 gacgagttcc atcaccttga tcgagtcctc gaactcgtcg aacgggacga aggatccggc
     2821 gcggcggacg gcgatccagg ccagcgcggt ccaggcgagg gaggacaccc gccggtcggc
     2881 gagcttggtg aaccactcgt accacgccat cccggtgttg cgttccacgc cgttgagttc
     2941 cccggcggtg aagttgtccg ggttgaggtc gatcttgtgc tcctccccgt tgatacggag
     3001 agtgaggtag tcctccacga gcgccccctt catgggccgt gatccgggcg aatcgggcat
     3061 gccccgtgct ggcccccagg tcgccgctgc tgggtttaca cggctctcgg gtatagtcat
     3121 atggcagacg gaaaaaagtc gcttagcgtg gatcggtaga tcaatatagg gtctgacctg
     3181 ggtaaacttt ggatcttgaa ggccctagtg gatcactaga gatccactca gtggatctta
     3241 gagtccgcgg tccagctccg cgacgaaccg gttcgttgcg ccctcgattc ctctccgcca
     3301 ctgcggacgg aactcgttga gggtcggcca gaacacctcc tgcccacgct gcgccgccca
     3361 cgcgccttgc cagctccccc gcttccccgt gccgaacacc gggtgccgcc acgggcggcg
     3421 gcgcgggaac ccgttgaggt aggtcgccag cgtcgggtac tccgggtcca cccggcggcc
     3481 ctccaccacg atggtgatcc cgttctgccg gacccgcatc cgagtcgcgc gggccacccg
     3541 gcggcggagc ccagtggacg tgtccggccg ggccgtgccg ccccggtccg gatctaggga
     3601 ctcgacctgt actccgagcc acgccgcctt gaccgcggcg agcgcgggcg ccccctcctt
     3661 gcggaccgct ttcgtcagct cccgttggag atcaccccgg cccgccttgc ggagacgccg
     3721 ggacacctcc cggaacttgt tcgccccgcc cgccttcatc tggatctccg ccttggcggc
     3781 agcggtcggc atggcagcgc ccccctacgt ctctgccgtg tccacggcgg gggtcgcctg
     3841 cgcagcgggg acgagccgca tggtggtgcc tcggcgcact tccttgcggt gccgctctag
     3901 ccactcatcg ccctgcgcct ggatctcgca gccgcggcag tgatgcggct ccgcgacgta
     3961 ggcgtgcggg tcctcggcga acacgtccgg ccgggtcccg catgacgggc acgcctgccg
     4021 ctgatggagg agccaccaga gcgccttgtc ccgatcatcg gagtcccacc cgaggaacac
     4081 cgagtgcggg atcccccgcg gtgcgcagta gtccagttcg agtttgaccg tcgggtcggt
     4141 caggatccgt ttcccacggc gctcgcgggg gcccggaagt tgaggttcac cgcggcgttg
     4201 caaagcgcgt tgtactcccc cgcggacagg ctttccttcg ccgcctgctc ccagtcctcc
     4261 gcggacatcg ggtcatcccc gtccggggtg accacgcagg cggcgaggag cgcgggccgg
     4321 aacgtggtgg ggttccacat catgccctgc ccctgctgct cctccgtggc gggatgcagc
     4381 tcgatgagcg cctcccactc cgggggcggc agcgt
//
LOCUS       DASUYN010000094         3757 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1790458, whole genome shotgun sequence.
ACCESSION   DASUYN010000094 DASUYN010000000
VERSION     DASUYN010000094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3757)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3757)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3757
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1790458"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..692
                     /locus_tag="VF061_01815"
     CDS             <1..692
                     /locus_tag="VF061_01815"
                     /inference="COORDINATES: protein motif:HMM:NF012968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HEX6668262.1"
                     /translation="AQGRDLAPRAAARLGVSLASDATDVELQGDTVLARHPAYTGKVI
                     VTLRLAGSPALLSLRPGAIPPAEQPRTAKVEQAKPAMDPAAARVTVTETTQQTGARLD
                     LGEAPVIVSGGRGLRAAENFKLVEELADAFGNAAVGATRAVTDDGWRPATDQIGQTGR
                     NVSPDLYVAVGISGAIQHLAGMRTARTIVAVNKDKDAPIFKIADYGIVGDLFEIVPRL
                     TEEVRKARSGQ"
     gene            complement(840..2120)
                     /locus_tag="VF061_01820"
     CDS             complement(840..2120)
                     /locus_tag="VF061_01820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEX6668263.1"
                     /translation="MSSPPPIPGFRPVPFTGVIFVMAEAARLGYRYGHPDWCNLGQGQ
                     PETGPLPGAPPRVHHVEIGVDDQDYAPVPGIWELRRAVAELYNRLYRSGKGSRYTERN
                     VCICGGGRASLTRAVAALGQVNLGHFLPDYTAYEELLDIFKLFTSIPILLDGREGYHF
                     SPEHLREEITGRGLSAVLLSNPCNPTGRVIADAELRGWVEVARELGCSLLVDEFYSHY
                     VWRETEDGDGLVSAARYVEDVDADPVVLFDGLTKNWRYPGWRCSWIVGPQQVIEAVSS
                     SGSFLDGGGSKPLQRSAVPLLEPTVVEAETQAIRESFLRKRALMGEGLRRAGVRFDLD
                     PEGTFYWWGDVSGLPPAINDGMSFFRAALERRVICVPGEFFDVNPGKRRSGRPSRFRH
                     YVRFSFGPEEAMVIEGVQRIGEMVGELGGKAVRR"
     gene            complement(2172..2663)
                     /locus_tag="VF061_01825"
     CDS             complement(2172..2663)
                     /locus_tag="VF061_01825"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: protein motif:HMM:NF016107.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HEX6668264.1"
                     /translation="MDLRKASRDPWVWGQLALFLLVGLWAPLIPRHVSLGGVDPVINR
                     LDPDWIRWLGAPLIAAGIALAAWAVRRLGRSLTPGTEPLPGAPLVTAGPYAHVRHPIY
                     AGLVLALAGYTLAWSNWMLALVVGLLSRAYFNGKARAEERWLVQRYPTYAAYMRQVPR
                     RVL"
     gene            2744..>3757
                     /locus_tag="VF061_01830"
     CDS             2744..>3757
                     /locus_tag="VF061_01830"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX6668265.1"
                     /translation="MSTIVPARHQRPLPLDQIIRRDPPGAEALEMDVVIVGAGPAGLA
                     CAIELTRLAKQDAESGNGPGELNIAVLEKAGALGEHSLSGAVVNPRAFHELFPDLNPS
                     EFPFRQPVAGEAVYFLTEGRAQRMPTPPTMHNAGFYTASLCEIVRWMGERAEQAGVNL
                     FAGFPVDALLVDGDAVRGVRTTPSGLDRDRQPTADYGEPTDLTAKVTVIAEGTRGLLT
                     QAWREWQQVRSPNPQIFALGVKEVWQTQRPLDSVIHTLGWPLPDDAFGGSFMYPLGPG
                     QIALGLVVGLDYHDALLDVHELLQRMKLHPLFRPYLEGGELLEWGAKTIPEGGYWSLP
                     ERLS"
BASE COUNT          605 a         1347 c         1291 g          514 t
ORIGIN      
        1 ccgcccaggg tcgcgacctc gcgccccgcg ccgcggcgcg cctcggggtg agtctcgcct
       61 ccgacgccac cgatgtcgag cttcagggcg acaccgtgct ggcacggcac cccgcctaca
      121 ccgggaaggt catcgtgacc ctgcggctcg caggctcgcc cgcgctcctc tcactccgtc
      181 cgggcgcgat ccccccggcc gagcagccgc gcacggcgaa ggtggagcag gcgaagccgg
      241 cgatggatcc cgcggccgcc cgggtgaccg tgaccgagac gacgcaacag acgggcgccc
      301 ggctcgacct gggggaggcg ccggtgatcg tgagcggcgg ccgcggtctc cgggcggcgg
      361 agaacttcaa gctggtcgag gagctggcgg acgcgttcgg caacgcggcg gtcggcgcca
      421 cccgcgccgt caccgacgac ggctggcgcc cggccaccga ccagatcggc cagaccggcc
      481 gcaacgtcag ccccgacctc tatgtggccg tcggcatctc cggcgccatc cagcacctcg
      541 cggggatgcg cacggccagg accatcgtcg cggtcaacaa ggacaaggat gccccgatct
      601 tcaagatcgc cgactacggc atcgtaggcg atctgttcga gatcgtgccc cgcctgacgg
      661 aggaagttcg gaaggcccgg agcgggcagt agataaggcg gtaaggcggt aaggcggtag
      721 ggcggtaggg tgtgtcaccc tgagcgaagc gaaggggacc atgcgggggt ggtctcattc
      781 gcttcgctca ggatgacatg cccgctgcag gcgcttatcc ctcggaccgc cttaccgcct
      841 taccgcctta ccgccttacc gccgagctcc ccgaccatct ccccgatccg ctgcacgccc
      901 tcgatcacca tggcctcctc cggtccgaac gagaaccgca cgtagtggcg aaagcgcgac
      961 ggccggccgc tgcgccgctt gccgggattg acgtcgaaga actcgcccgg cacgcagatc
     1021 acccgccgct ccagcgcggc gcggaagaac gacatcccgt cgttgatcgc cggcgggaga
     1081 cccgagacgt ctccccacca gtagaacgtg ccttcggggt ccaggtcgaa gcgcacgccg
     1141 gcccggcgca gtccctcacc catcagcgcg cgcttccgca ggaacgactc ccggatcgcc
     1201 tgggtctccg cctcgacgac cgtcggctcg agcagcggca ccgccgatcg ctggagcggc
     1261 ttgctgccgc cgccgtcgag gaacgagccg ctgctcgaca ccgcctcgat cacctgctgc
     1321 gggcccacga tccagctgca tcgccagcca gggtagcgcc agttcttggt gagtccgtcg
     1381 aacagcacca cgggatcggc gtccacgtcc tcgacgtagc gcgcggcgga caccaggccg
     1441 tccccgtcct cggtctcccg ccagacatag tgcgagtaga actcgtccac caggagggag
     1501 cacccgagct cgcgggcgac ctcgacccag ccccggagct cggcgtcggc gatgacgcgg
     1561 ccggtaggat tgcagggatt ggagagcagc accgcggaaa ggccgcgtcc ggtgatctcc
     1621 tcccgcaagt gctcgggact gaagtggtat ccctcccggc cgtcgaggag gatggggatg
     1681 gaggtgaaga gcttgaagat gtcgagcagc tcctcgtagg ccgtatagtc gggcaggaaa
     1741 tggcccaggt tcacctgtcc cagcgcggcg acggcacggg tgagcgacgc ccgcccgccg
     1801 ccacagatgc agacgttgcg ctcggtgtag cgggatccct tgccgcttcg atacaggcgg
     1861 ttgtacagct ccgccaccgc acgccgcagc tcccagatgc cgggcaccgg cgcgtagtcc
     1921 tggtcgtcca ccccgatctc gacgtggtgg acccgcggtg gtgcgccggg cagcgggccg
     1981 gtttccggct gaccctgccc caggttgcac cagtccgggt ggccgtagcg atagccgagc
     2041 cgggctgcct cggccatgac gaagatgacg ccggtgaagg ggacgggacg gaatccgggg
     2101 atcgggggtg gagaagacat agcggggaag cgtatgccga acgcgcgagg gggggaagga
     2161 ccgccctctc gctacagcac gcgccgcggc acctgccgca tgtacgcagc gtacgtcgga
     2221 tagcgctgca ccagccagcg ttcctccgcc cgagccttcc cgttgaagta cgcccgcgac
     2281 agcagtccca cgaccaatgc gagcatccag ttgctccacg ccagcgtgta ccccgccagc
     2341 gcgagaacga ggccggcata gatcgggtgc cgcacgtgcg cgtatgggcc cgcggtgacc
     2401 agcggtgccc cgggcagcgg ctccgtgccg ggcgtgaggc tgcggcccag ccgacgcacc
     2461 gcccacgcgg caagcgcgat ccccgccgcg atgaggggag cgccgagcca ccggatccag
     2521 tccggatcca ggcggttgat caccggatcc accccgccca ggctgacgtg ccgcgggatg
     2581 agcggcgccc agagccccac caggagaaac agcgccagtt gcccccagac ccaggggtcc
     2641 cggctcgcct tccgcaggtc catggcacca acatagcccc ggaagtgggc tggttatatt
     2701 tccgccgcct cgacgtccga ccccttccca ggagccctcc gacgtgtcca ccatcgttcc
     2761 ggcccgccac cagcgaccac tgccgctcga ccagatcatc cggcgcgatc cccccggggc
     2821 ggaggcgctc gagatggacg tggtgatcgt cggagcggga cccgcggggc tcgcctgcgc
     2881 catcgagctg acgcgactgg cgaaacagga tgcggagtca ggcaacgggc ccggcgagct
     2941 gaacatcgcc gtgctggaga aggccggcgc gctgggtgag cacagcctct cgggcgccgt
     3001 ggtgaatccc cgcgccttcc acgagctctt tcccgacctg aacccgagcg agtttccctt
     3061 ccgccaaccg gtcgcgggcg aggcggtgta cttcctgacc gagggccgcg cccagcggat
     3121 gcccacgccg cccacgatgc acaacgccgg cttctatacc gcgtccctct gcgagatcgt
     3181 ccgctggatg ggggagcggg cggagcaggc cggcgtgaac ctgttcgcgg gctttcccgt
     3241 ggatgcgctg ctggtcgatg gggatgccgt gcgaggcgtc cgcaccaccc catcgggcct
     3301 cgaccgcgac cggcagccca cggccgatta cggcgagccc accgacctca ccgcgaaggt
     3361 gacggtgatc gccgagggga cgcggggact gctgacccag gcgtggcgcg agtggcagca
     3421 ggtccgctcg cccaacccgc agatcttcgc cctcggcgtg aaggaggtct ggcagacgca
     3481 gaggccgctc gactcggtga tccacacgct cggctggccg ctgccggacg acgcgttcgg
     3541 cggcagcttc atgtatccgc tgggacccgg tcagatcgcg ctcgggctcg tggtggggct
     3601 cgactaccac gacgcgctcc tggacgtgca cgagctgctc cagcgcatga agcttcatcc
     3661 cttgttccgt ccctacctgg agggcggcga gctgctggag tggggcgcga agaccatccc
     3721 ggagggaggc tactggagcc tgcccgagcg gctgagc
//
LOCUS       DASUYN010000095         3893 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1791599, whole genome shotgun sequence.
ACCESSION   DASUYN010000095 DASUYN010000000
VERSION     DASUYN010000095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3893)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3893)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3893
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1791599"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1450)
                     /locus_tag="VF061_01835"
     CDS             complement(<1..1450)
                     /locus_tag="VF061_01835"
                     /inference="COORDINATES: protein motif:HMM:NF014665.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0016653 - oxidoreductase activity, acting
                     on NAD(P)H, heme protein as acceptor [Evidence IEA];
                     GO_process: GO:0006784 - heme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="COX15/CtaA family protein"
                     /protein_id="HEX6668266.1"
                     /translation="MTTIQRPDRTRQLRRLAWAGSGFALGLIVLGGIVRITGSGMGCG
                     DHWPRCNGEWFPPLDLPTLIESSHRWAAAVVSILVFAVAAVALRRHRTERALRNPALL
                     AAFLLVVQVLLGAVTVKLVLPPWVVITHFANAMLLLSALLVLALRTSAHAPAPLAPDE
                     RHGAHRLVLATAALGFVVVLFGAQVANFDAGLLCLGFPLCNGRVLPPEGDLAVLHWSH
                     RALAFGFLAVLGVLLARLNRSRMADNTAAVRRWAALVSAATLIQIGVAAAMILHLLPT
                     GLRALHLLVGTVIWAALVILTFHSARTPRKSSVSRETGPAPERGSPSLAADLVTLTKP
                     RIISLLLVTTVAPMFITPAGLPSPLLVFWVVVGGYLMAGGANAINMWFDRDIDTRMTR
                     TRLRPIPSGRISPTAGLAFGLALAAVAFAVFWFQVNPLSAWLALGGLLFYVFVYTIWL
                     KRSSPQNIVIGGAAGAFPPLVGWASVTGGLDLA"
     gene            1525..2898
                     /locus_tag="VF061_01840"
     CDS             1525..2898
                     /locus_tag="VF061_01840"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEX6668267.1"
                     /translation="MPTPLAADAWGERLPRHLGLWSAIAVLVGSTIGSGIFRVPASVA
                     ARLQEPGPVVIAWIAGGAIALFGALTLAELAAAMPRSGGVFAYLLEGFGPLPAFLFGW
                     SELTVIRASALGAISTIFAEYLGYFLAFTPSQVQYVAAAAIVVMGFLNYVGVKSAARF
                     MNLVTALKFGSLAGLALLGFTAGQGSWGHFSPAFSGGVTLSLVATALISIMWTYDGWA
                     DLSFMGGEVKDPGRTLPLALILGTSAIIGVYLLLNVAYIYLVPLTEMAGSPLIAATAA
                     ERITTFGVAGGAVISGVVMVSCLGALTGSMMTGPRIFYAMADRGVFFRAIARVSPRYQ
                     SPSTAIGLATVLGVVYVLLNDFQQLADKFILGIWPFYALAVAAVFVLRRTRPDLERPY
                     RTWGYPVVPLLFLLASLGMVVNALVTDLANTGITFAIILAGVPVYYAWRGLTGGRAAA
                     EGSTEAT"
     gene            complement(3065..>3893)
                     /gene="nadC"
                     /locus_tag="VF061_01845"
     CDS             complement(3065..>3893)
                     /gene="nadC"
                     /locus_tag="VF061_01845"
                     /EC_number="2.4.2.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR00078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004514 - nicotinate-nucleotide
                     diphosphorylase (carboxylating) activity [Evidence IEA];
                     GO_process: GO:0019363 - pyridine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HEX6668268.1"
                     /translation="IAAIALAEDGDTDVTSALTVPANLDGQGTLEHRTGGIVAGAAYA
                     DAVARTCDCRIEWRAPDGRKVPPGSVIGLVHGRLNRILRAERPLLNLLQRACGIAGAT
                     RAYVEAVAGTRCRVLHTRKTAPGLRGLDVAAVLAGGGARHRLDLSHEVMVKDNHWQAL
                     RLGGGSLAAALEMARARGITSLQVEVESTAQLEEACAAGATRLLIDNQPAATARAWAE
                     RARELAPGIEIEATGGITLASVREYAEAGVDFISIGALTHSVVAADIGLEVSQPLSP"
BASE COUNT          575 a         1359 c         1377 g          582 t
ORIGIN      
        1 ccgccaggtc cagcccgccg gtgaccgacg cccacccgac caggggcgga aaggcgcccg
       61 ccgcgccgcc gatcacgatg ttctgcggac tcgaccgctt gagccagatg gtgtagacga
      121 agacgtagaa caggagccca ccgagcgcga gccacgcgct gagcggattc acctggaacc
      181 agaacacggc gaacgccacc gccgccaggg ccagaccgaa cgcgagcccc gcggtggggc
      241 tgatccggcc cgagggaatc ggccgcagtc tggtccgcgt catccgggta tcgatgtccc
      301 ggtcgaacca catgttgatg gcgttcgccc cgccggccat caggtagccg ccgaccacga
      361 cccagaagac cagcagcggc gagggaagcc cggccggggt gatgaacatc ggggcgacgg
      421 tcgtcaccag caggagggag atgatcctgg gcttggtgag cgtcaccagg tcggcggcca
      481 gcgagggcga gccacgctcc ggtgcgggcc cggtctcccg cgacaccgac gacttccgcg
      541 gcgtccgcgc cgagtggaac gtcaggatga ccagcgccgc ccagatcacg gtgccgacca
      601 gaagatggag ggcgcgcagc ccggtgggga gcagatgcag gatcatcgcc gccgccaccc
      661 cgatctggat cagggtcgcg gccgagacca gggccgccca gcggcgaacc gccgccgtgt
      721 tgtccgccat ccgggagcgg ttgagccggg ccagcagcac gccgagcacg gccaggaatc
      781 cgaacgccag cgcccgatgg ctccagtgca ggaccgcgag gtctccctcc ggcggcagca
      841 cccgtccatt gcagagcggg aagcccaggc acaggaggcc ggcgtcgaag ttggccacct
      901 gggcgccgaa gagaacgacg acgaacccga gtgccgctgt ggccagtacc aaccggtgcg
      961 cgccgtggcg ctcgtcgggg gccagcgggg ccggggcgtg agccgaggtc cggagcgcga
     1021 gcacgagcag cgcgctcagt agcagcatgg cgttggcgaa gtgggtgatg accacccagg
     1081 gggggaggac gagcttgacg gtgacggcgc cgagcagcac ctggaccacc agcaggaagg
     1141 ccgccaggag ggccgggttc cggagtgccc gctcggtgcg gtgcctgcgg agcgccacgg
     1201 cggcgaccgc gaacaccagg atgctcacca cggcggcggc ccagcggtgg ctgctctcga
     1261 tcagggtcgg gaggtcgagc ggcggaaacc actcgccgtt gcagcggggc cagtgatccc
     1321 cgcaccccat gccggatccc gtgatccgaa cgatgccgcc gaggacgatc aggccgaggg
     1381 cgaaaccgct gccggcccag gccagacgcc ggagctggcg ggtccggtct ggccgctgga
     1441 ttgtagtcaa aggaagggtg cccccacaga gtcaggcggg aaagaacggg gcgcggcagg
     1501 cccttgtcaa ggttacattt agccatgcca acaccacttg ccgccgacgc ctggggtgag
     1561 cgtcttcccc ggcatctcgg cctctggagc gccatcgcgg tgctggtcgg gtccaccatc
     1621 ggcagcggca tcttccgggt ccccgccagc gtcgccgcgc gactccagga gccgggtccg
     1681 gtggtcatcg cctggattgc gggcggtgcc atcgccctct tcggcgcact gaccctggcg
     1741 gagctggcgg cggccatgcc ccggtcgggc ggggtgttcg cctacctgct ggaggggttt
     1801 gggccgctgc cggccttcct cttcggctgg tccgagctca ccgtcatccg ggcctccgcc
     1861 ctcggggcca tctccaccat cttcgcggaa tacctgggct actttctcgc ctttacaccc
     1921 tcccaggtcc agtacgtcgc ggccgcggcg atcgtggtga tgggtttcct caattatgtg
     1981 ggagtgaaga gcgccgcccg gttcatgaac ctggtgaccg cgctcaagtt cggctcgctg
     2041 gcgggcctcg ccctgctggg cttcaccgcg gggcagggga gctgggggca cttctcgccc
     2101 gccttctcgg gcggagtgac actctccctg gtggccacgg ccctgatctc catcatgtgg
     2161 acctacgacg ggtgggcgga cctctcgttc atgggcgggg aggtcaagga tccgggccgc
     2221 acattgccgc tggcgctgat cctcggcacg tcggcgatca tcggggtcta cctcctgctc
     2281 aacgtcgcct acatctacct ggtcccgctg accgagatgg ccggctcgcc cctcatcgcg
     2341 gcgactgccg ccgagcggat caccaccttc ggcgtcgcgg gcggagccgt catctccggg
     2401 gtcgtcatgg tctcctgcct gggcgcgctg accgggtcca tgatgaccgg cccgcggatc
     2461 ttctacgcca tggcagaccg gggtgtgttc ttccgggcga tcgcccgggt atccccccgc
     2521 taccagagcc cgtccacggc gatcggcctc gccacggtgc tcggcgtggt ctatgtcctc
     2581 ctcaacgact tccagcagct ggccgacaag ttcatcctgg ggatctggcc gttctacgca
     2641 ctcgcggtgg cggcggtgtt cgtgctgcgc cgcacccgcc cggatctcga gcggccgtac
     2701 cgcacgtggg ggtatccggt ggtcccgctg ttgttcctgc tggcgtcgct gggaatggtg
     2761 gtgaacgccc tggtcacgga cctcgcgaac acggggatca ccttcgcgat catcctggcg
     2821 ggggtgccgg tgtactacgc ctggcggggg ctcaccggcg gccgtgcggc ggccgaggga
     2881 agtacggagg cgacctgact tgcgggataa ccagccgcag atgaacgcag aggagcaggt
     2941 cgaaggcatc cagcactaac aatccatcgc gctccagtgc gttcctctgc gttctctgcg
     3001 ttcatctgcg gctcaaccac gagcagcgtg gcagagtggt gccggcatgg cccctgcact
     3061 gcgctcaggg tgacagcggt tgcgagacct ccagcccgat gtccgccgcc acgacgctgt
     3121 gggtcagcgc gccgatcgag atgaagtcca cgccggcctc ggcatactct cggacgctcg
     3181 ccagcgtgat tccgccggtg gcctcgatct cgatccccgg cgccagttcg cgagcccgct
     3241 cagcccacgc ccgcgcggtt gccgcgggct gattgtcgat cagcagccgc gtcgcgccgg
     3301 cggcgcacgc ctcctccagc tgcgccgtgg actccacctc gacctggagc gacgtgatgc
     3361 ccctggctcg cgccatctcc agggcggcgg ccagcgagcc gccccccagt cgcagtgcct
     3421 gccagtggtt gtccttcacc atcacttcat ggctgagatc cagccggtgg cgcgcgccgc
     3481 cgccggcgag cacggcggcg acatcgagcc cgcgcagtcc gggagcggtc ttgcgcgtat
     3541 ggaggacgcg gcagcgggta ccggcgacgg cctccacata ggcgcgggtg gcgccggcga
     3601 tgccgcaggc gcgctggagg aggttgagca gtggccgctc ggcccggaga atccggttga
     3661 gcctgccgtg taccaggccg atcaccgagc ccgggggcac ctttcggccg tcgggtgcgc
     3721 gccactcgat ccggcaatcg caggtccgcg ccacggcgtc cgcgtaggcc gctccggcca
     3781 cgatgccgcc ggtccggtgc tccagcgttc cctgcccgtc gaggttcgcc ggcacggtga
     3841 gcgcactggt gacgtccgtg tcgccgtctt ccgcgagcgc gatggcggcg atg
//
LOCUS       DASUYN010000096         2278 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_248877, whole genome shotgun sequence.
ACCESSION   DASUYN010000096 DASUYN010000000
VERSION     DASUYN010000096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2278)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2278)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2278
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_248877"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..938
                     /gene="ftsZ"
                     /locus_tag="VF061_01850"
     CDS             <1..938
                     /gene="ftsZ"
                     /locus_tag="VF061_01850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HEX6668269.1"
                     /translation="EHLQGADLVFVTCGMGGGTGTGAAPIIAQIAKDIGALTVGIVTK
                     PFLFEGRRRMKQAENGITELRKNVDTMIVVPNERLLAVVGKGIPFQDSLKKADEVLLQ
                     ATQGIANLITKTGIINVDFADVRTVMQNGGAALMGTGIGRGENRALEAAQQAISSPLL
                     DNVSIAGATGVLINIIGGDDLTLGETTQINDIIHDAVGDDAEIIFGAGNDAAMHGEVR
                     VTVIATGFDRAMPMEHQPSAPMGRPSGPAGVLNFPTTRGRPSAPAAQPPGAHPPATQP
                     IARPQPRAPQAPPAAGPPAETPEMEIPTFIRRQMD"
     gene            938..2209
                     /locus_tag="VF061_01855"
     CDS             938..2209
                     /locus_tag="VF061_01855"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEX6668270.1"
                     /translation="MRGRLAGGLFVMAAAAIALVGVRQPRSEAALPVAEPIVVVGDFS
                     TVVLDTLRRGETLSELLARQGVLDLDLSRLNVAALDPRRLRAGLVFSFRRPAAESLPD
                     RISVRSSPEQRVVFRRAVQGWESAVDSIRWRGEPFRIEGAIDNSLYEAIDAQVSDDQL
                     DAAQRQRLAWDLADIYAWQVDFTRDIQSGDQFRVVFDRLVSGDGEVRFGRVLASDLTM
                     SGKSLTAFRFERAGRSTFYDDDGKSLRRAFLRAPVQFRRISSSFARSRRHPVLGITRR
                     HQGTDYAASPGTPVMAAGDGVVARAGRAGGYGNLIELRHRNGITTRYGHLRGFARGIR
                     GGARVTQGQTIGYVGSTGLASGPHLHYEFRVNGVAKDSRRVELGSGLPVPDSEREAFE
                     QERDRLKALLDRPPPGAIAQVSGDTAARRLP"
BASE COUNT          334 a          821 c          816 g          307 t
ORIGIN      
        1 tcgagcatct ccagggggcc gacctcgtct tcgtcacctg cgggatgggc ggcgggaccg
       61 ggacgggcgc ggcgccgatc atcgcgcaga tcgccaagga catcggcgcc ctgaccgtcg
      121 ggatcgtcac caagccgttc ctgttcgagg ggcgccggcg gatgaagcag gcggagaacg
      181 gcatcaccga gctgcggaag aacgtggaca ccatgatcgt ggtgcccaac gagcggctcc
      241 tcgcggtggt cgggaagggg atccctttcc aggattcgct caagaaggcc gatgaagtac
      301 tgctgcaggc gacgcagggc atcgcgaacc tgatcaccaa gaccggcatc atcaacgtgg
      361 acttcgccga cgtccgcacc gtcatgcaga acggcggggc ggcgctcatg gggaccggga
      421 tcggccgggg cgagaaccgg gcgctcgaag cggcccagca ggcgatctcg agcccgctgc
      481 tcgacaacgt gagcatcgcc ggcgccacgg gggtgctcat caacatcatc ggcggcgacg
      541 acctcaccct gggcgagacg acccagatca acgacatcat ccacgacgcg gtgggcgacg
      601 acgccgagat catcttcggc gccgggaacg atgccgcgat gcacggcgag gtgcgggtca
      661 ccgtcatcgc caccgggttc gaccgcgcga tgccgatgga gcatcagccc tcggccccga
      721 tgggccggcc ctcggggccc gccggggttc tcaacttccc gaccaccagg ggccgcccct
      781 cggcgccggc ggcccagccg ccgggtgcgc atccgcccgc cacccagccg atcgcgcggc
      841 cccagccccg ggcgccgcag gcaccccccg cggcggggcc gccggccgag acgccggaga
      901 tggagatccc cacgttcatc cgcaggcaga tggactgatg cggggtcggc tggccggagg
      961 gctgttcgtg atggccgcgg ccgccatcgc gctggtggga gtgcggcagc cccggagcga
     1021 ggcggcgctg ccggtcgccg agccgatcgt ggtggtgggg gacttctcca ccgtggtgct
     1081 cgacaccctg cgccggggcg agacgctgtc cgagctcctg gcgcgccagg gtgtgctcga
     1141 tctcgacctc tcccggctga acgttgccgc gctcgaccct cggcgcctcc gcgccgggct
     1201 cgtcttcagc ttccgtcgcc ccgccgccga gtccctcccc gaccggatca gcgtccgctc
     1261 ctcgcccgaa cagcgggtag tcttccgccg cgcggtgcag ggctgggaat cggccgtgga
     1321 ctcgatccga tggcggggcg aaccgttccg gatcgagggg gcgatcgaca actcgctgta
     1381 cgaggccatc gacgcccagg taagcgacga ccagctcgac gccgcgcagc gccagcggct
     1441 cgcctgggac ctcgccgaca tctacgcctg gcaggtggac ttcacccggg atatccagag
     1501 cggcgaccag ttccgggtcg tcttcgaccg gctggtctcc ggggacggcg aggtgcgctt
     1561 cggccgggtg ctcgccagcg acctcaccat gtcgggcaag agtctcaccg cgttccggtt
     1621 cgagcgcgcc ggccggtcca ccttctacga cgacgacggg aagtcgctcc gccgcgcgtt
     1681 cctccgggcg cccgtccagt tccggcgcat ctcctccagt ttcgcccggt cgcgtcgcca
     1741 cccggtcctc ggcatcaccc gccggcacca ggggaccgac tacgcggcgt cgcccgggac
     1801 gccggtgatg gcggcaggag acggggtggt ggcccgggcc ggccgcgccg gaggctacgg
     1861 caacctcatc gagctgcgac accggaacgg aattaccacc cgctacgggc acctgcgtgg
     1921 cttcgcgcgg ggcatccggg gcggggcccg ggtcacccag ggacagacca tcgggtacgt
     1981 gggatccacc ggactggcga gcgggccgca cctgcactac gagttccggg tgaatggcgt
     2041 ggccaaggac tcgcgccggg tggagctcgg cagcggcttg ccggtgccgg actccgagcg
     2101 ggaggcgttc gagcaggagc gcgaccggct caaggcgctg ctcgaccgtc cgccccccgg
     2161 cgccatcgcg caggtatccg gcgacaccgc ggcccggcgg ctcccgtagt gcggcggtag
     2221 tggagctctt tcccgccatc gacatccgaa acggccgcgt cgtccgcctg agtcaggg
//
LOCUS       DASUYN010000097         2017 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1350641, whole genome shotgun sequence.
ACCESSION   DASUYN010000097 DASUYN010000000
VERSION     DASUYN010000097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2017)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2017)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2017
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1350641"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            172..807
                     /locus_tag="VF061_01860"
     CDS             172..807
                     /locus_tag="VF061_01860"
                     /inference="COORDINATES: protein motif:HMM:NF013918.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase
                     heme-binding subunit MsrQ"
                     /protein_id="HEX6668271.1"
                     /translation="MTRAALITRVVKPVLFVLAPLPLAYAVARLATGSVEGDQVKFLQ
                     HVTGDTVLACLLLTLSVTPLRRLSGWNELIRVRRLLGLTAFWYALIHFVSYVVFDHSL
                     SPSDIGSDIIEHPWVLVGFTSLVLLVPLAVTSTKGWIRRLGGKRWNRLHRLIYPATAA
                     GLIHYFWLVKKDVSDPIYWAAALLVVLALRFVRRPERRLAPVPLSPEGGAR"
     gene            1367..>2017
                     /locus_tag="VF061_01865"
     CDS             1367..>2017
                     /locus_tag="VF061_01865"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HEX6668272.1"
                     /translation="MASGVWAQDLRGTVEGVVVSSEGAEPIADAMVGIFGMGRHVTTD
                     SAGRFTLSEVKFGSQRVEVRAIGYQPSAHGVTVVPGDVTRVELRLQPAVVNLPEVVVS
                     SSREEQLASATAVSVGVIRGEEIRETRGHHPAEIVNRTPGVYVSNFGGEGHATAIRQP
                     ITTKALYAYLEDGVPIRSTGFFNHNALYEINIPQAGRLEVIKGPGTAVYGSDAVGGV"
BASE COUNT          289 a          726 c          672 g          330 t
ORIGIN      
        1 tacggcttct acgccaacgt gaatccggag gtggatcacc cccgctggag tcaggcgcgg
       61 gagcggcggg tgggggagtt cttcaagcgg aagacgctga tattcaacgg ctacgccgac
      121 gacgtggcgt cgctctacgc cggaatggac cttcggaagt actactgacc gatgacccga
      181 gccgcgctga tcacccgggt cgtcaagccg gtgctcttcg tccttgcgcc cctgcctctg
      241 gcctacgcgg tcgcccgcct ggccaccggc agcgtggagg gcgaccaggt caagttcctc
      301 cagcatgtca ccggcgatac cgtcctcgcg tgcctcctgc tcaccttgag cgtcacgccg
      361 ctgcgccgac tcagcggctg gaacgagctc atccgggtcc gacggctcct gggcctcacc
      421 gccttctggt acgcgttgat ccatttcgtc tcctacgtcg tgttcgacca ctcgctctct
      481 ccgagcgata tcgggtcgga catcatcgag catccctggg tgctggtggg gttcacgtcg
      541 ttggtcctgc tggtgccgct cgccgtgacc tcgaccaagg gctggatccg gcggctcggg
      601 gggaagcgct ggaaccgcct gcaccggctc atctaccccg ccaccgccgc cggcctgatc
      661 cattacttct ggctggtcaa gaaggacgtc agcgatccca tctactgggc ggccgccctc
      721 ctggtcgtgc tggcccttcg gttcgtgagg cggcccgagc gtcggttggc gccggtcccg
      781 ctttcccccg agggaggcgc tcgctaactt agcgcgcatg ttcgctgtcc tccggcggtg
      841 tcgcgccctc gccctgacgc tcctcctggc cgctcccggg ctggggggaa cctggctgtc
      901 actggcgcac ccctgcccgg tggacatgcc ctggctggcc ggggcagggc atggtgctca
      961 cggcccgcaa gcatcgcacg ggcaaggaga tgcgcccgag ggttcaagta gttcctgcag
     1021 ctgtgtcggc gcctgccagg gcggcaccgc cggcctcatc cagtccccca tccatgcggt
     1081 cgtagccttc gccggcaccg ggtgggatac cgctccctca gcccccgacg tcgaagcccc
     1141 ggtccggccc agcccgcacc ggcagcctcc agccaccgct ccaccactgg cctgagcgcg
     1201 ccctccaggg cgcaacaacc gtcgaagggc cggcgccacc tgcgccgtcc ccattcggtc
     1261 acaggccccg ccggagatcg gcgggctcac gtggtggagg aactacccga tgatcagcag
     1321 acgtgcctta cggcggggcg tcctcctggc cgctggcgcc tgtgccatgg catccggggt
     1381 ttgggcccag gatctccgcg gcaccgtcga aggcgtagtc gtcagcagcg agggggccga
     1441 gcccatcgct gacgcgatgg tcggcatctt tggaatgggc cgccacgtca ccaccgattc
     1501 ggccggtcgc ttcacgctga gcgaggtgaa gttcggcagc cagcgggtgg aggtccgtgc
     1561 gatcgggtac cagccgagcg cgcacggggt gaccgtggtg ccgggcgacg tcacccgggt
     1621 cgagctccgc ctccagccgg cggtggtcaa cctcccggag gtcgtcgtga gcagcagccg
     1681 ggaggagcag ctcgcctccg cgaccgcggt cagcgtcggc gtcatccggg gggaggagat
     1741 ccgcgagacc cgcggccacc acccggccga gatcgtgaac cgcaccccgg gcgtctacgt
     1801 cagcaacttc ggcggggaag gtcacgcgac ggcgatccgg cagcccatca ccaccaaggc
     1861 gctctacgcg tatctggaag acggggtacc gatccgctcg accggcttct tcaaccacaa
     1921 cgcgctctac gagatcaaca tcccccaggc cggccggctc gaggtcatca agggtccggg
     1981 caccgcggtc tacgggagcg acgccgtcgg cggcgtg
//
LOCUS       DASUYN010000098         5272 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_910360, whole genome shotgun sequence.
ACCESSION   DASUYN010000098 DASUYN010000000
VERSION     DASUYN010000098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5272)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5272)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5272
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_910360"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1790)
                     /locus_tag="VF061_01870"
     CDS             complement(<1..1790)
                     /locus_tag="VF061_01870"
                     /inference="COORDINATES: protein motif:HMM:NF014442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006306 - DNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HEX6668273.1"
                     /translation="MDLAEALKGVRSMEDLPALAAALGCEPLWDPVPGQREPMVVVGS
                     REDFPWYAVAGPRAERAAQALARRMVARGRLCGALGLDAGARRLTVTVAWSGAPRLVV
                     DLDAPEPTALAKLRRLAGWSCGGAAGFAAHAVDVLGGESVGLRFFRQFRDTLERMAAG
                     LPGPLAAADRKGLALLQLSRVLFLYFVQARGWLAGNPRFLADAVDRCLARKRKVHRDL
                     LRPLFFGTLNRPMPERGRGARALGPIPFLNGGLFEPHPLERRLRRDIGNELWRDAFDR
                     LFERFHFTLESEAGGGIAPDMLGRVFEGVMAPDERRASGTYYTPAALVRELLGQALVA
                     WLAERLSCPAPEAERRLADGDRLACHEVRSLRVLDPAVGSGAFLLGALDRLTPPWATG
                     RRGAALRRQVLRRNLFGVDRNGAAVRLTELRLWLAVVAGDPGERPDQVRPLPNLDCLI
                     RQGDSLFDLAGAALRPAAGSSHIGLAELRGRVVVATGAAKRGALRDLARAEVGVAEAT
                     LAEADGSLQEAVGECLRAARAVDLFGVRRGLDRQGAARLAELREELRRIRGLRRSLTR
                     EREVPWFDYRIQFADVFAAGGFDLVVGNPP"
     gene            1947..2609
                     /locus_tag="VF061_01875"
     CDS             1947..2609
                     /locus_tag="VF061_01875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668274.1"
                     /translation="MAMTYLHRSSSVAALLLLLARAASAQTAADSGTFVVRHAGDTVA
                     TETFSRGATSIQGTLALNNYKHTFHRYTAVVAPDASVPMIDISVREDADSGRIKARLL
                     QRARVIFREDSAAVDAVIGQVISTHVLGTRAGAIPYLNMSFALLEQAIRRSRANGAAL
                     KEVPFFNLSGGQTVSGTLTPVGRDSLALAIGEVTFRLRVDPDGRVLGAAIPQQNVLVD
                     RH"
     gene            complement(2635..3798)
                     /locus_tag="VF061_01880"
     CDS             complement(2635..3798)
                     /locus_tag="VF061_01880"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX6668275.1"
                     /translation="MAFPTELLPALPWLAPFASLFRLARSRPNLADAPPGTGPLVSVV
                     IPARNESATIETVVRSVLASTYRPLELLVVDDRSTDDTAALVERLAAVDSRVRLLRGE
                     PLPQGWYGKPWACLQGYRGARGELLLFTDADTRHHPELLARSVGALQSERADLLTVAP
                     RQLCLSFWERVVMPQIWLLLALRYHPERVNRARHERDVIANGQYILVPRASYEAVGTH
                     EVVRGEVAEDLALAQAFHRAGRRLYFAFAERLMETRMYRSLPEIVEGWSKNMYLGGRR
                     SFPGQPLLQALVPVMLVASFAFWLVPPAVLAFTGAVGHLGAPAVLATVSSAVFWMLVS
                     YGMQIPIWYGLLYPLGALTALYIGARSAWRGGRRVEWRGRAYTAAGESARRPE"
     gene            complement(3816..4382)
                     /locus_tag="VF061_01885"
     CDS             complement(3816..4382)
                     /locus_tag="VF061_01885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668276.1"
                     /translation="MRASQPALLAAGRVIAEMRDAMVTQWADWLGDRITAAPTIPRPT
                     VEREFRLLLDVISEMVGPLRREVNTIWFRVCEHYGRVASARGLAAGEVVEELQFLREL
                     LTRNLAPVLAAMRARQGMAIMLRLNRVIDKGIAVAVVGYTDALVATLFAQNGVPTAGA
                     EYDRAEVERQLEALEQELNSLIRQPQQQ"
     gene            4430..>5272
                     /locus_tag="VF061_01890"
     CDS             4430..>5272
                     /locus_tag="VF061_01890"
                     /inference="COORDINATES: protein motif:HMM:NF014114.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LD-carboxypeptidase"
                     /protein_id="HEX6668277.1"
                     /translation="MGSKAPIRPPRLARGSRIALVAPAGPLLDRDDLVRAEALCRALG
                     YDPVLGSNTARHYGYFAGTDEERLSDLNGALRDSDVAAVWCIRGGYGVTRILEQVDFA
                     ALARHPKLLIGYSDITALLNAALRHAGIVTFHAPMARVAMPPFSRRHFERVLASPEPP
                     GRLDRLPVPPDVLLPRENRIMTLRGGIAEGPLVGGNLSLIQCLVGTPYLPDLDGAILF
                     LEDVGEDLYRVDRMLAHLRMVGALQRLAAVAVGRFTELKRAMSDGALGFDEVLATYLL
                     PLGIP"
BASE COUNT          808 a         1914 c         1825 g          725 t
ORIGIN      
        1 cacggcggat tgccgaccac caggtcgaac cccccggccg cgaacacgtc cgcaaactga
       61 atccggtaat cgaaccaggg cacctcgcgc tcgcgcgtca gggagcggcg gagaccgcgg
      121 atccgacgga gttcctcacg cagctcggcc agccgcgccg cgccctgccg atccaggcct
      181 cgacggaccc cgaagagatc caccgcccgc gcagccctca ggcattctcc gaccgcttcc
      241 tgcagggatc cgtcggcctc cgccagcgtc gcctcggcga cgcccacctc agcgcgggcg
      301 aggtcccgga gcgccccgcg cttggccgcc ccggtggcga ccaccactcg tccccgcagc
      361 tcagccagcc cgatgtggga cgagccggcg gcgggccgca gcgccgcgcc ggccaggtcg
      421 aacaggctgt cgccctggcg gatgagacag tcgaggttgg gcaatggccg gacctggtcc
      481 ggccgctcgc ccggatcgcc ggccacgacg gcgagccaga gcctgagctc cgtcagccgc
      541 accgcggcgc cgttgcggtc cacaccgaag agattgcgcc ggagcacctg tcgccggagt
      601 gccgcgcccc tgcggccggt ggcccagggg ggcgtgagcc ggtcgagggc cccgaggagg
      661 aaggctccgg atccgacggc ggggtcgagg accctcaatg accggacctc atgacacgcc
      721 aagcggtctc catcggcgag ccggcgctcc gcctccgggg cggggcagga gagacgctcc
      781 gccagccatg ccacgagcgc ctggcccagc agctctcgca ccaaggcggc cggtgtgtag
      841 taggtgcccg aggctcgacg ctcgtccggc gccatgacgc cttcgaatac gcggcccagc
      901 atgtcgggcg cgattccgcc gcccgcctcg gactcgagcg tgaagtgaaa ccgctcgaac
      961 agacggtcga aggcatcccg ccagagctcg ttgccgatgt cccggcgcag acggcgctcg
     1021 aggggatggg gctcgaaaag gcccccgttg agaaagggaa tcggccccag cgcgcgtgcc
     1081 ccgcgcccgc gctccggcat cggtcggttg agggtgccga agaagagggg tcgcagcagg
     1141 tcgcgatgga ccttccgctt gcgtgcgagg cagcggtcca ccgcgtcggc gaggaagcgg
     1201 gggttgcccg ccagccagcc cctggcctgc acgaaataca ggaacaggac gcggctgagc
     1261 tgcagcaggg ccaggccctt ccgatcggcc gccgcgagtg gccccggcag cccggcggcc
     1321 atgcgctcga gtgtgtcgcg gaactgacgg aagaaacgga ggccgacgct ttccccaccc
     1381 agcacgtcca cagcgtgggc cgcgaagccg gcggcaccgc cgcagctcca gccggccaac
     1441 cggcggagct tcgcgagagc agtcggctct ggagcgtcga gatccaccac cagtcgcggc
     1501 gcgccgctcc aggcaacggt gacggtgagc cggcgagcac ccgcgtcgag gccgagcgca
     1561 ccgcacagac ggccccgcgc caccatcctc cgcgccaacg cctgcgcagc ccgctccgct
     1621 cgcggcccgg cgactgcgta ccaggggaag tcttcccggg agccgaccac caccatgggc
     1681 tcacgctggc cggggaccgg atcccagagt ggctcgcatc ccagtgcggc ggcgagggcg
     1741 ggcagatctt ccatcgagcg gacgcccttg agcgcctccg ccaggtccac gggggctccg
     1801 cggtgaggac ggggcccacc ttagcggtcg ggctcgaccc ttgcggaacc gatccgccgc
     1861 gtcgaggtgc ggaattgcgt ctgtcgcgtc cggacgctac catccacccc gtgccgcggg
     1921 tccgactgga cttcaaatcc cctttcatgg caatgacata cctgcaccga tccagtagtg
     1981 tcgccgccct gcttctcctg ctcgcccggg ccgcctccgc ccagaccgcg gccgacagcg
     2041 gcacgttcgt ggtgcgtcat gcgggggaca ccgtcgccac cgagaccttc tcccgtgggg
     2101 cgacctcgat ccagggcact ctcgccctca acaactacaa gcacaccttc caccgctaca
     2161 ccgcggtcgt cgccccggat gcctcggtcc ccatgatcga catctcggtg cgcgaggacg
     2221 cggacagcgg gcggatcaag gcgaggctgc tgcagcgggc gagggtgatc ttcagggagg
     2281 acagcgccgc ggtggacgcg gtcatcgggc aggtgatctc gacccatgtc ctggggacgc
     2341 gggccggtgc gattccctat ctgaacatgt cgttcgccct tctggagcag gcgatacggc
     2401 gctcgcgggc caacggtgcg gcgctgaagg aggtgccctt cttcaacctc tcgggcggtc
     2461 agacggtgag cggtacgctg acgccggtgg gccgcgactc gctcgcgctt gcgatcggtg
     2521 aggtgacctt ccggctcagg gtcgaccccg acggccgcgt cctcggcgcc gccattccac
     2581 agcaaaacgt gttggtggac cgacactgac cccaagccac gaggtcggcc ggcgtcactc
     2641 cggtcgccgc gccgactcgc cggccgccgt gtaggctcgc cctctccact ccactcgtcg
     2701 tcccccgcgc caggcggagc gcgcgccgat gtagagcgcg gtgagcgcgc cgagcgggta
     2761 gagcagaccg taccagatgg ggatctgcat tccgtagctg accagcatcc agaacacggc
     2821 cgagctcacc gtcgcgagca ccgcgggcgc cccgagatgg ccgaccgcac cggtgaacgc
     2881 cagcaccgcc ggggggacca gccagaaggc gaaggaggcc accagcatga ccgggaccag
     2941 cgcctgtagc agcggctggc ccgggaacga gcgccgtccg cccaggtaca tgttcttgct
     3001 ccacccctcg acgatttcag gcaggctccg gtacatcctg gtctccatca gccgctcggc
     3061 gaaggcgaag tacaagcgcc tcccggcccg gtggaacgcc tgcgccaggg cgaggtcctc
     3121 cgccacctca ccgcgtacga cctcgtgggt gcccacggcc tcgtagctcg cccgggggac
     3181 taggatgtac tggccgttgg cgatgacatc gcgctcgtgc cgcgcccggt tcacccgctc
     3241 cgggtgatag cgcagcgcca gcagcagcca gatctgcggc atcaccaccc gctcccagaa
     3301 gctcaggcac agctggcggg gcgcgaccgt caacaggtcg gcccgctcac tctgcagggc
     3361 acccaccgat cgggccagca gctccggatg atgcctggtg tcggcgtcgg tgaagagcag
     3421 cagctccccc cgagcgccgc ggtagccctg caggcaggcc catggcttgc cgtaccagcc
     3481 ctgcggcagc ggttcgccgc gcagcagtcg cacccgggag tccaccgccg cgaggcgctc
     3541 gaccagggcg gcggtgtcgt cggtgctgcg gtcgtccacc accagcagct ccagcggccg
     3601 gtaggtcgag gccagcaccg atcgcaccac cgtttcgatg gtcgccgatt cgttgcgtgc
     3661 agggatcacg accgacacca gcggacccgt gcccgggggc gcgtcggcga ggttgggacg
     3721 ggatctcgcc agccggaaga ggctggcgaa cggcgccagc cagggcaggg ccggcagcag
     3781 ctcggtcggg aacgccacgg taggatcggg tactgctact gttgctgcgg ctgccgaatc
     3841 agagagttga gctcctgctc cagcgcctcc agttgccgtt cgacctcggc gcgatcgtac
     3901 tcggcgccgg cggtcggcac gccgttctgc gcgaacagcg tcgcgacgag ggcgtcggtg
     3961 tagcccacca ccgcgacggc gatgcccttg tcgatgaccc gattgagccg cagcatgatg
     4021 gccatgccct gccgcgcgcg catcgccgcg agcacggggg cgaggttgcg ggtgagcagc
     4081 tcacggagga actgcagctc ctcgacgacc tcgccggcgg cgagcccgcg ggccgacgcg
     4141 acccggccgt agtgctcgca gacccggaac cagatggtgt tgacttcccg acggaggggg
     4201 ccgaccatct ccgagatcac gtcgaggagc aggcggaact cccgctccac cgtagggcgg
     4261 ggtatcgtgg gagcggcggt gatgcggtcc ccgagccagt cggcccactg ggtgaccatc
     4321 gcgtcccgca tctctgcgat gacgcggccg gcggcgagca acgcgggctg cgaagcacgc
     4381 actaccagtc tcccctgtaa aggtgtcggc aatctaaggc ggagcgagaa tggggtcaaa
     4441 agcgccgatt cgcccaccca gactcgcgcg aggcagtcgc atcgcgctgg tcgcccccgc
     4501 tgggccactg ctggaccgtg atgatttagt gcgggcggag gcgctctgcc gtgcgctggg
     4561 ttacgacccg gtgttggggt ccaacacggc gcggcattac ggctacttcg ccggcaccga
     4621 tgaggagcgg ctgtccgacc tcaacggcgc gctccgggat tccgatgtgg ctgcagtctg
     4681 gtgcatccgc ggcgggtacg gtgtgacccg gatcctggag caggtggact tcgccgcgct
     4741 ggcccgtcac cccaagctgc tcatcggcta ctccgacatc acggcgctgc tgaacgccgc
     4801 cctgcgccac gcggggatcg tgacgttcca cgcgccgatg gcgcgcgtgg ccatgccgcc
     4861 cttctcccgc cggcacttcg agcgcgtgct cgcgtcgccc gagccccccg ggcggctcga
     4921 tcggctgccg gtgcccccgg acgtgctgtt gccccgggag aaccgcatca tgaccctccg
     4981 tgggggcatc gccgagggcc cgctggtggg cggaaacctc tccctcatcc aatgcctggt
     5041 cggcacgccg tacctgcccg atctcgacgg tgccatcctg ttcctggagg acgtgggaga
     5101 ggacctctat cgcgtggacc ggatgctggc ccatctccgg atggtcgggg cgctccagcg
     5161 tctggccgcg gtcgcggtgg gccggttcac cgagctcaag cgcgccatga gcgacggcgc
     5221 cctgggattc gacgaggtgc tcgcgacgta cttgcttcct ctcgggatcc cg
//
LOCUS       DASUYN010000099         2660 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1792254, whole genome shotgun sequence.
ACCESSION   DASUYN010000099 DASUYN010000000
VERSION     DASUYN010000099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2660)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2660)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2660
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1792254"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1648
                     /locus_tag="VF061_01895"
     CDS             <1..1648
                     /locus_tag="VF061_01895"
                     /EC_number="2.2.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016744 - transketolase or transaldolase
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEX6668278.1"
                     /translation="IAERLLAEHFNRPGHRVVDHRVWAFASDGDLMEGVASEAASLAG
                     HLRLGKLTVLYDDNHITIDGDTALTFSEDVQRRFEAYGWHVVRVGDGNDLAGIAAALD
                     AARAETGKPTLVILRTYIADPAPTKRNSAEAHGAPLGADEVRRTKEIMGWPTEPAFFL
                     PDDALAHWRAALDRGAALQSEWDERWRSYAADHADLATEFQRWMSGDLPADWDRGLPS
                     LTAGGGPLATRQASGLALQAIAAAVPNLVGGSADLGGSTGTTLKQGGTFGPTSSGRQF
                     HWGVREHGMAAILNGIAAHGGLRPFGSTFLVFSDYMKPALRLAAIMRLPVIYIGTHDS
                     IGVGEDGPTHQPVEHLAMLRAIPNLVVLRPADAAETVEAWRAAMMRLNGPTLLVLSRQ
                     KLPVLERPPLGSAEGVSRGAYTLLDAPGGAPQAILIATGSELHVAVAAARLLQADRVR
                     VRVVSMPSWELFAAQPEAYRHEVLPPSVRVRLGLEAASPFGWLRWVGDEGAMLAMDGF
                     GASAPGERLFQEFKFTPERAAELVRQLLARRHSPGKGEGS"
     gene            1645..>2660
                     /gene="tal"
                     /locus_tag="VF061_01900"
     CDS             1645..>2660
                     /gene="tal"
                     /locus_tag="VF061_01900"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF002881.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004801 - transaldolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HEX6668279.1"
                     /translation="MNPLVRLGELGQSPWYDYITRDLIASGELARLIREDGLRGMTSN
                     PTIFEKAVAGSSSYDQDIRRLGREGRSPGEIFEALAVADVRAACDRFAELHRRTGGLD
                     GQVSLEVSPELANDAEGTIHEAHRLWAALDRPNAMIKIPGTEAGLPAITRCIADGISV
                     NVTLLFSVERYAAVIEAWLAGMEQRLTRGEPLEGVASVASFFVSRVDGKVDPLLDRSS
                     PGAGSALRGRIAIANAAAAYRLFEWSLGTARWDRLAKAGARPQRPLWASTSTKDPRYP
                     DTYYVEALVAPRTVNTLPPETFTAYRDHGRPAVRIRESMARAGAELKALEQAGIDLAA
                     ITREL"
BASE COUNT          359 a          964 c          973 g          364 t
ORIGIN      
        1 catcgccgag cggctgctgg ccgagcattt caaccggccg gggcaccggg tggtggacca
       61 ccgggtgtgg gcgttcgcca gcgacggcga cctgatggag ggcgtcgcga gcgaggccgc
      121 ctccctcgcc gggcacctcc ggctcggcaa gctcaccgtg ctctacgacg acaaccacat
      181 caccatcgac ggcgacaccg cgctcacgtt ctccgaggac gtgcagcgcc ggttcgaggc
      241 ctacgggtgg cacgtggtcc gggtcggcga cgggaacgac ctcgcgggca tcgccgcggc
      301 gctcgacgcc gcccgcgccg agaccggcaa gccgacgctg gtgatcctgc ggacctacat
      361 cgccgatccc gcgccgacca agcgcaactc ggccgaggcc cacggcgcgc ccctgggcgc
      421 ggacgaggtg cgccggacga aggagatcat gggctggccc acggagccgg cgttcttcct
      481 ccccgacgac gcgctggcgc actggcgcgc cgcgctggat cgcggcgccg ccctccaatc
      541 cgagtgggac gagcggtggc ggtcctatgc cgccgaccat gccgacctcg ccacggaatt
      601 ccagcgctgg atgtcgggcg acctgcccgc cgactgggat cgcggtctgc ccagcctgac
      661 ggccgggggc gggccgttgg ccacccggca ggcgtccggc ctggcgctgc aggccatcgc
      721 ggccgccgtg cccaacctgg tcggcggctc cgccgacctg ggcggcagta cggggacgac
      781 gctcaagcag ggcgggacct tcggtccgac ctcgtccggc cggcagttcc actggggcgt
      841 gcgcgagcac gggatggcgg cgatcctgaa cggcatcgcc gctcacggcg ggcttcgccc
      901 gttcggcagc accttcctgg tcttctcgga ctacatgaag cccgccttgc ggctcgccgc
      961 catcatgcgt ctgccggtga tctacatcgg cacccatgac tcgatcggcg tcggagagga
     1021 cggaccgacc catcagccgg tcgagcacct ggcgatgctc cgcgccatcc ccaacctggt
     1081 cgtgctgcga ccggccgacg cggcggagac ggtcgaggcc tggcgcgcgg ccatgatgcg
     1141 gctcaacggg ccgacgctgc tggtgctctc gcgtcagaag ctgcccgtgc tggagcgtcc
     1201 gcccctcggc tccgcggaag gcgtgagccg cggcgcctac accctgctgg acgcccccgg
     1261 cggcgcgccg caggccatcc tcatcgccac cggcagcgag ctgcacgtgg ccgtcgccgc
     1321 ggcgcggctg ctgcaggcgg accgggtgcg ggtgcgggtc gtctccatgc cctcgtggga
     1381 gctgttcgcg gcgcaaccgg aggcgtaccg gcacgaggtg ctgccgccct cggtgagggt
     1441 gcggctgggt ctcgaggcgg cttcgccgtt cggctggctg cgatgggtcg gggacgaggg
     1501 cgcgatgctc gcgatggatg gcttcggcgc gtcggccccc ggcgagcgac ttttccagga
     1561 gttcaagttc acccccgagc gcgcggcgga gctcgtgcgc caactgctgg cccggcgaca
     1621 ctcgccgggc aagggcgagg gatcatgaac ccgctggtgc ggctgggcga gctggggcag
     1681 agcccctggt acgactacat cacccgggac ctgatcgcct ccggtgagct ggcgcgactg
     1741 atccgcgagg atgggcttcg ggggatgacc tccaacccga ccatcttcga gaaggcggtg
     1801 gccgggagca gctcctacga ccaggacatc cgccggctgg gccgcgaggg acgatccccg
     1861 ggggagatct tcgaggcgct cgcggtggcc gacgtgcgcg ctgcctgcga ccggttcgcc
     1921 gagctgcacc gccggaccgg cggactcgac ggccaggtgt cgctggaggt gtcgcccgag
     1981 ctggccaacg acgccgaggg cacgatccac gaagctcatc gcctgtgggc ggcgctggac
     2041 cggccgaacg cgatgatcaa gatcccgggt accgaggccg gtctgcccgc catcacgcgc
     2101 tgcatcgcgg acggcatcag cgtcaacgtc accctgctct tctcggtcga gcgctacgcg
     2161 gcggtgatcg aggcctggct cgcggggatg gagcagcggc tgacgcgggg cgagccgctg
     2221 gagggggtcg cgtcggtggc gagctttttc gtgagccggg tggacggtaa agtggatccg
     2281 ctgctcgacc ggtcctcgcc gggcgccgga tcggcgctcc gcggccgcat cgccatcgcc
     2341 aacgccgcgg ccgcgtatcg gctgttcgag tggtccctcg gcaccgcgcg ctgggaccgg
     2401 ctggccaagg ccggggcccg gccgcagcgc ccgctctggg cttcgaccag caccaaggac
     2461 ccgcgctacc ccgacaccta ctacgtcgag gccctggtcg ctccccgtac cgtcaacacc
     2521 ctcccgccgg agaccttcac cgcctaccgg gaccacggcc gtcccgcggt ccggatccgc
     2581 gagagcatgg cccgagccgg cgccgagctg aaggcgctgg aacaggccgg gatcgatctc
     2641 gccgcgatca cgcgggagct
//
LOCUS       DASUYN010000100         2877 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_470659, whole genome shotgun sequence.
ACCESSION   DASUYN010000100 DASUYN010000000
VERSION     DASUYN010000100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2877)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2877)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2877
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_470659"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1679
                     /locus_tag="VF061_01905"
     CDS             <1..1679
                     /locus_tag="VF061_01905"
                     /inference="COORDINATES: protein motif:HMM:NF037660.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HEX6668280.1"
                     /translation="SLALLRWVAPDLPPRHRSLHATLAWSYALLTPTQQILFRHLALF
                     AGGFTLDGAEAVFTGEVPGADAGAGDGLFYRRPEPPPRPPLVLDTLAALVDHGLAQPL
                     APIMDEPRYRMLETVRQFGREQLAASGQEAEVRRRHLLYFVALVERLAERIRLPEGGL
                     VLARLDGKHDDVRAALTWAEASGEVALGLRLARAMFNYWLARGHLREGPVWLARALSW
                     GPSAPSAERARALGGLGWLVLFRGDSERAETAFAEALRVAGEVGSRLTEAMALSGLTQ
                     VHLNRGHYDEAAARADEALALYREQEPAAIAGHTYVSLMCARRGEIALAAGDLDGAAC
                     FLAEAERRQRTLDQPWGLSAILHWLGDLARARGDLAGAVARYRESLALVGDSSHFLFV
                     ADALDGVAAVAATRGQPERAARLHGAAAALREQMGEVVPPWERPAHERDLAAARAALE
                     PAAFEAAWAAGVALPLEAAVAEAMSDPSPALAASDAAPTSDPAEVLGLTPREADVLRL
                     LAQGHSNREIAEALFISPRTVNFHVTNLLGKLDLESRAAAAAFAVRHGLA"
     gene            2045..2224
                     /locus_tag="VF061_01910"
     CDS             2045..2224
                     /locus_tag="VF061_01910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668281.1"
                     /translation="MPDNVNKEQRDVREAKQDLRDAKQDKGTGGHHQQDVSQERRDVR
                     DEKQELREARDDKRS"
     gene            2453..>2877
                     /locus_tag="VF061_01915"
     CDS             2453..>2877
                     /locus_tag="VF061_01915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668282.1"
                     /translation="MARNVIVATFDTRNQAYDAASDIDRVSGSIIDVMSGAIVEKDLL
                     GNVTTLDTKNIGGAWGTVGGVAGGALVGALVGLLGGPGGAAIGTAVGAAAASSGAAAG
                     SLVGGTLGWSGDLINWGLNEDYLDTVRTRIMPGTVAVVA"
BASE COUNT          425 a          962 c         1095 g          395 t
ORIGIN      
        1 agagcctggc gttgctgcgc tgggtggcgc ccgacctgcc gccccgccac cgctcgctgc
       61 acgccaccct cgcctggagc tacgccctgc tgaccccaac ccagcaaatc ctcttccggc
      121 acctggcgct cttcgcgggg ggcttcaccc tcgatggggc cgaggcggtc ttcaccggcg
      181 aggtgccggg agccgacgcg ggggcagggg acggactgtt ctaccggcgt cccgagccgc
      241 caccccggcc gccgctcgtg ctcgacaccc tcgcggcgct agtcgatcac gggctcgccc
      301 agcccctggc cccgatcatg gacgagccgc gctaccggat gctggagacg gtgcgccagt
      361 tcggccgcga gcagctggcg gcaagcggcc aggaggccga ggtgcggcgg cggcacctgc
      421 tctacttcgt ggccctcgtc gagcggctgg ccgagcgcat ccggctgccg gagggagggc
      481 tggtcctggc ccggctcgac ggcaagcacg acgatgtgcg agcggcgctg acctgggcgg
      541 aggcgagcgg ggaggtggcg ctggggctgc gcctggcgcg ggcgatgttc aactactggc
      601 tcgcccgcgg ccacctgcgg gagggcccgg tctggctggc gagagcgctg agctggggtc
      661 cgtcggcgcc gtcggccgag cgggcgcgag ccctgggcgg gctcggctgg ctggtgctct
      721 tccggggcga ttccgagcgg gcggagacgg cgttcgccga ggcactgcgc gtcgccggcg
      781 aggtggggtc gcggctgacc gaggcaatgg cgctgtccgg actgacccag gtgcacttga
      841 accgggggca ctacgacgag gcggcggcgc gggcggatga ggcgctcgcg ctctaccggg
      901 agcaggagcc agcggccatc gccggtcaca cctacgtcag cttgatgtgc gcccgccggg
      961 gggagattgc cctagccgcc ggcgacctgg acggcgcggc ctgcttcctg gcggaggcgg
     1021 agcggcggca gcgaacgctg gaccaaccct ggggactgag cgccatcctg cactggctcg
     1081 gagaccttgc gagggcgcgc ggcgatctag ccggagccgt ggcgcgctac cgggagagcc
     1141 tagcgctggt gggggacagc agccacttcc tctttgtggc cgatgcgctc gatggcgtgg
     1201 cggcggtggc ggcgacacgg ggccaaccgg agcgggcggc ccgcctgcac ggggcggcgg
     1261 cggcgctgcg cgagcagatg ggcgaggtgg tgccgccgtg ggagcgcccg gctcacgagc
     1321 gcgacctggc cgcggcgcgg gcggcgctgg agccggccgc gttcgaagcg gcctgggcgg
     1381 ctggagtggc gctgccgctg gaggcggccg tcgccgaggc gatgtccgac ccgagtcccg
     1441 ctctcgccgc gagtgacgct gcgccgacgt ctgatccggc tgaggtgctg gggctgacgc
     1501 cgcgggaagc tgatgtgctg cggcttctgg cgcagggcca ctccaaccgg gagattgccg
     1561 aggcgctgtt catcagcccg cgcaccgtca acttccacgt caccaatctc ctcggcaagc
     1621 tcgacctcga gtcccgcgcc gccgccgccg ccttcgccgt ccgccacgga ttggcctgag
     1681 ccccacctcc cgcatcctct gcaccctggt tgatctgaca ggtcggccgt ttcagatcaa
     1741 gcgcctccaa tccggtagtt cggacggtgc gcagggaatc ctcctctgac atgctgagga
     1801 tcagaccggc gcgtgacggc ccacgtcgtt aggccctctc ggaggcgaga gcacggtccc
     1861 gggcggtgaa cagtggtggg caaggaggag ctcacccccg cggcctcgac tgccctggtc
     1921 gacgtcgccg acggcgacaa gacctcgcct gtaccgacgg agatcgtctc gttgcgcggt
     1981 ccgcctcgtc cagtgggggc acgagcactg ggtggttgca gcattcgaga aggagacaac
     2041 agcgatgcct gacaacgtga acaaggagca gcgtgacgtc cgggaagcca agcaggattt
     2101 gcgggacgcc aaacaagaca aggggacggg aggtcaccac cagcaggacg tgagccagga
     2161 gcggcgcgac gtccgcgacg aaaagcagga gctgcgcgag gctcgcgacg acaagcgcag
     2221 ctagtcccct tggcacctgc tggcggcaag ctggcgagtc ggcagccgca gccgtcgacc
     2281 ggtcagcagt cgcgtgaaaa ccgcaagggc acggggcgta gtgcgctacg ccccgtgttg
     2341 tgcactgcgt tcctgcagcc attaccggag caagacggcg cgcgtggtca ggcccttccg
     2401 ccgcagagag cccggacccc gggttcgtgt ctaacacgca agaaagaaga ccatggccag
     2461 aaatgtcatt gtggcgacgt tcgacacccg taaccaggcc tacgacgcgg cctccgacat
     2521 cgaccgcgtg agcggcagca tcatcgacgt catgagcggg gcgatcgtgg aaaaggacct
     2581 gctcggcaat gtcacgacgc tggatacgaa gaacatcggc ggcgcctggg gcaccgtcgg
     2641 cggagtggcc ggcggtgcgc tcgtgggcgc cctggttggc ctcctcgggg ggccgggcgg
     2701 cgcagccatt ggtaccgcgg tcggggccgc ggcggccagc tcgggcgcgg cggcgggcag
     2761 cctcgtgggc gggacgctcg gctggtcggg cgacctgatc aactgggggc tgaacgaaga
     2821 ctatctcgac acggtccgta cgcgcatcat gccgggcaca gtggcggtgg tcgcgga
//
LOCUS       DASUYN010000101         3444 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1352972, whole genome shotgun sequence.
ACCESSION   DASUYN010000101 DASUYN010000000
VERSION     DASUYN010000101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3444)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3444)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3444
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1352972"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            71..430
                     /gene="rbfA"
                     /locus_tag="VF061_01920"
     CDS             71..430
                     /gene="rbfA"
                     /locus_tag="VF061_01920"
                     /inference="COORDINATES: protein motif:HMM:TIGR00082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HEX6668283.1"
                     /translation="MRQPSRRPDQVAGTIRQVIADALTREIRDPRVGFVTVTGVLVTN
                     DLSHARVMVSVPGDEGAKSRALQGLQSAAGFLRSRAARALTTRTVPELHFELDKGIEH
                     ATRIEELLQSIRREERD"
     gene            445..1281
                     /gene="truB"
                     /locus_tag="VF061_01925"
     CDS             445..1281
                     /gene="truB"
                     /locus_tag="VF061_01925"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: protein motif:HMM:TIGR00431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004730 - pseudouridylate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HEX6668284.1"
                     /translation="MDKPAGLTSHDAVQRVRRALRTRQAGHTGTLDPFATGLLVVLVG
                     RATRLARFVESEAKTYLATARLGVRTDTDDPTGTVIEERSAAQVDAGAVRDALTAFAG
                     EQRQRPPAYSAKHIGGERSYRLARRGVAVEPSEITVTVHRIDLLAWEPPTVTFRATVS
                     PGTYLRAIGRDLGERLGVGAHLTALRREAIGALRVEDAVPLDEVAPGALLPPARVLGH
                     LPAVELDAAGKAAVVHGRAVAAGGASAGGVPVVLLAGDELVAVARPEDGRLRPTVVLA
                     SP"
     gene            1278..2246
                     /locus_tag="VF061_01930"
     CDS             1278..2246
                     /locus_tag="VF061_01930"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: protein motif:HMM:NF004160.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003919 - FMN adenylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HEX6668285.1"
                     /translation="MTGGRAADTAPLPRRPRGTVVTVGSFDGVHLGHQAVLREIAERA
                     SAAGRASVLVTFEPHPLEVVNPQAAPPLLTTGPERREILAQTPLDVAYFLRFDRQVAA
                     MSPEDFVCGVLLERCGMRELVIGHDHGFGRGRSGDVETLRRLGAVHGFDVDVVPPVDY
                     GDQHVSSSRVRRAVAGGDLGSAARMLGRPYTLSGLVGHGAGRGRRLGVPTVNLTDVPP
                     QKLLPPDGIYAVEVEWRGGRAGGMMHQGPRPTFADGRRALEANLFEFEGDLYGEWVRI
                     TWVERLRDVEHFTSVEQLQEQMERDRVQALAALARGRTDPNRVTHA"
     gene            2258..>3444
                     /locus_tag="VF061_01935"
     CDS             2258..>3444
                     /locus_tag="VF061_01935"
                     /inference="COORDINATES: protein motif:HMM:NF045451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668286.1"
                     /translation="MSIRNRLLVILALIALSVFYLVPREVTIRERDLETGVMSDRVVK
                     RVPLKLGLDLQGGMHLALELDQSKQVSADPKRDLELALTVLRKRVDEFGVTEPVTQMV
                     GDDRIVVELPGIDDPARAKAIVQRSAFLEFRITDETSALEKAIPAMDRTLRGLGIRAE
                     GAAGRPSAVEQLLGGDTAAARPRTYTAAAPGRASDRAAAADTSPVAGGVLAGLIQPSG
                     GAGGGAPGEYMVPETAFPRVDSLLNLPAVARQLPRGLTLRWAATPTSVGVESYRFLYV
                     LDDRPIITGSSLEEAQAQIDPLTNGPIVTFQLDRAGGRKFGEETGRHVGDYMAIILDG
                     RVQGRPPVIQSRIGRNGQITLSGRSLQEAQDLALTLKAGALPIPLRIVEERQVGPSLG
                     EDA"
BASE COUNT          456 a         1200 c         1325 g          463 t
ORIGIN      
        1 tccgggccgc cgaccgcacg gtcgaggaga cggatggcgt gcggatcgtg gacacggcga
       61 tggtgtttcg atgaggcagc cttcccgtcg accggatcag gtggccggca ccatccgcca
      121 ggtgatcgcc gacgccctca cccgcgagat ccgcgatccg cgggtcggat tcgtcacggt
      181 caccggcgtg ctggtcacca acgatctctc gcacgcccgg gtgatggtca gcgttcccgg
      241 cgacgagggg gcgaagtcgc gcgcgctcca gggactgcag agcgccgccg gcttcctccg
      301 cagccgcgcc gcgcgggcgc tcaccacccg gaccgtgccg gagctgcact tcgagctgga
      361 caagggcatc gagcatgcga cgcggatcga ggagctgctc cagtccatcc ggcgggagga
      421 gcgcgactga tcggcgccct gctggtggac aagcccgctg gcctgacctc ccacgacgcg
      481 gtgcagcggg tccgccgggc gctccggacc aggcaggcgg gacacaccgg cacgctggat
      541 ccgttcgcca ccgggctcct ggtggtcctg gtggggcggg ccacccgact cgcgcggttc
      601 gtggagtccg aggccaagac ctacctcgcc acggcgcggc tcggggtccg gaccgacacc
      661 gacgatccga ccgggacggt gatcgaggag cggtcggcgg cgcaggtgga cgccggggcg
      721 gtgcgggacg cgctgaccgc cttcgccggg gagcagcggc agcggccgcc ggcctactcc
      781 gccaagcaca tcggcggcga gcgcagctac cgcctcgcgc gccgcggcgt cgcggtggag
      841 ccgtccgaga tcacggtgac ggtgcaccgg atcgacctgc tcgcgtggga gccgcccacc
      901 gtgaccttcc gcgccacggt gagcccggga acgtacctgc gggcgatcgg gcgcgacctg
      961 ggtgagcgcc tcggcgtggg agcccatctc accgcgctgc gccgggaggc gatcggggcg
     1021 cttcgggtgg aggacgcggt gcccttggac gaggtcgcgc ccggggccct gctgccgccc
     1081 gcgcgggtgc tgggacatct gccggcggtc gagctggacg ccgccgggaa ggcggcggtg
     1141 gtgcacgggc gagcggtggc cgccggcgga gcgtcggccg gaggtgtccc ggtggtgctc
     1201 ctggcgggtg acgagctggt ggcggtggcg cgacccgagg acgggcggct gcggcccacc
     1261 gtggtgctcg cctccccatg acgggtggcc gggcggcgga caccgccccg ctcccgcgac
     1321 gcccccgcgg cacggtggtg accgtgggct cgttcgacgg cgttcacctg gggcatcagg
     1381 ccgtgctgcg ggagatcgcc gagcgcgcta gcgccgcggg ccgggccagc gtcctggtca
     1441 ccttcgagcc gcatcccctc gaggtggtca acccccaggc cgcgccgccg ctgctgacga
     1501 ccgggccgga gcggcgcgag atcctggccc agacgccgct cgacgtcgcc tacttcctcc
     1561 ggttcgaccg gcaggtggcg gcgatgagcc ccgaggattt cgtgtgcggc gtgctgctgg
     1621 agcgctgcgg gatgcgggag ctggtgatcg ggcacgatca cggcttcggg cgggggcgaa
     1681 gcggcgacgt ggagacgctc cgccgtctgg gagcggtcca cggcttcgat gtggacgtgg
     1741 tgccgccggt ggactacggc gaccagcacg tctccagctc ccgggttcgt cgggcggtgg
     1801 ccggcggcga cctcggcagc gccgcccgca tgctggggcg gccgtatacg ttgagcgggc
     1861 tggtggggca tggggccggc cggggccggc gcctcggggt gccgaccgtc aatctcaccg
     1921 acgtgccgcc gcagaagctg ctgccgccgg acgggatcta tgccgtggaa gtggagtggc
     1981 gcggcggccg cgccggcggg atgatgcatc aggggccccg gcccaccttc gcggacgggc
     2041 gccgcgcgct ggaggcgaac ctcttcgagt tcgagggcga cctctacggg gaatgggtga
     2101 gaatcacctg ggtggagcgg ctccgcgacg tcgagcactt cacttcggtg gagcagctgc
     2161 aggaacagat ggaacgcgat cgcgttcagg cgctggcggc tctcgcccgc ggccggaccg
     2221 atcccaaccg cgtgactcac gcctgagcgt cgatacgatg tccattcgca atcgtctgct
     2281 ggtcatcctg gccctcatcg ccctgagcgt cttctacctg gttccgcgcg aggtcaccat
     2341 ccgggagcgc gatctcgaga ccggtgtcat gagcgaccgg gtcgtgaaac gcgtgccgct
     2401 caagctcggg ttggacctcc agggcggcat gcacctggcg ctcgagctgg accagtccaa
     2461 gcaggtgtcg gccgacccca agcgggacct cgagctggcg ctcaccgtcc ttcgcaagcg
     2521 ggtggacgag ttcggcgtca ccgagccggt gacgcagatg gtcggcgacg accgcatcgt
     2581 ggtcgagctg cccgggatcg acgaccccgc ccgcgccaag gcgatcgtgc agcggagcgc
     2641 gttcctcgag ttccgcatca ccgatgagac cagcgcgctg gaaaaggcga ttcccgccat
     2701 ggaccggacg ctgcggggtc tcgggatccg ggccgaggga gccgcgggcc gcccctccgc
     2761 cgtggagcag cttctgggcg gggacaccgc ggcggcgcgc ccccggacgt acaccgccgc
     2821 cgccccgggc cgggcgagtg atcgcgccgc cgcggcggac accagcccgg tcgcgggggg
     2881 cgtgctcgcg gggctgatcc agccctccgg cggggcgggg ggcggagcgc cgggcgagta
     2941 catggtaccc gagaccgcgt ttccccgggt ggacagcctg ctgaaccttc ccgcggtcgc
     3001 ccggcagctg ccgcgcgggc tcaccctgcg ctgggccgcc acgccgacca gcgtgggcgt
     3061 agagtcctac cggtttctct acgtgctcga cgatcggccc atcatcaccg ggagcagcct
     3121 ggaggaagcg caggcccaga tcgacccgct caccaacggc ccgatcgtca ccttccagct
     3181 cgaccgcgcc ggcggccgga agttcggtga ggagaccggc cggcacgtgg gcgactacat
     3241 ggcgatcatc ctcgatgggc gggtgcaggg gcggcccccg gtgattcaga gccggatcgg
     3301 gcgcaacggc cagatcaccc tgtcgggccg gtccctgcag gaggcgcagg acctcgcgct
     3361 cacgctgaag gcgggtgccc tgccgattcc cctccggatc gtcgaggagc ggcaggtcgg
     3421 ccccagcctg ggggaggacg cgat
//
LOCUS       DASUYN010000102         6566 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_251184, whole genome shotgun sequence.
ACCESSION   DASUYN010000102 DASUYN010000000
VERSION     DASUYN010000102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6566)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6566)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6566
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_251184"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..669)
                     /locus_tag="VF061_01940"
     CDS             complement(<1..669)
                     /locus_tag="VF061_01940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668287.1"
                     /translation="MCESKTALAVVKKQKDTGTWGGNLLGLAPSAAQGIKDVGTIPNY
                     RRLLQLEWPRTSRPFKLADRVLFRLLSRDEDPALMFELQKLVKSDPEASIWARENIRE
                     AASAALAEAGFAEDPRLRGAGHKIASLISQFLRGPIAEKPFVKVGKVLALHPEAHPPS
                     WYSVAMIAAMPNLRRERAGFTERLGHYLAQPAPKKAFVILVGKRSIKPQHLLLGDPIE
                     ADAKG"
     gene            complement(894..2549)
                     /locus_tag="VF061_01945"
     CDS             complement(894..2549)
                     /locus_tag="VF061_01945"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX6668288.1"
                     /translation="MHPTLALSCLLAAAPLLAVPLTAQQGSPPGARVAAALSGDVLRG
                     HLEFLADDALEGRAPGTRGGDLAQKYLASQFRRLGLEPAGDSGSYYQRVPIIALTPTP
                     TLAIAAPSPRQLKWKDDYVLWSARNDSSVQVRGDAVFVGYGIVAPEAGWNDYAGLDAR
                     GKIVVALVNDPGLQDSTLFRGKILTYYGRWTYKIEEARRQGAAGLLLIHTDESATYPW
                     STVLSGWTGAQVRLESPPDSLIVAGWLQKRTAEDLFSAGGQDLAALTATAARKGFRPV
                     PLGLELEGRVRSTIRRTETANVLARLPGRGPLAKEAVLIGGHYDGYGIATPQNGDSIY
                     NGAEDNASGTAAVLAAAEAFVRSGVRTSRSLTFVGFAAEESGLIGSQALANDPPVPLA
                     DLAAILNLDVMNLYGRTTDVSALGLDQSTLGKAFTAAASAEGLQVSSNEEALLRGSYF
                     RSDHFPLARVGVPGTSVENGSSYVGKPADYGKEQKDKYIADRYHQASDEILPWFTYDG
                     AIQQLRVTVRTAVCIANAPTQPDWAAGSEFRAAGLARRKPAGS"
     gene            complement(2584..3429)
                     /locus_tag="VF061_01950"
     CDS             complement(2584..3429)
                     /locus_tag="VF061_01950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668289.1"
                     /translation="MRRDTTWDLRRTTEPRRTGLFRDRSVGESSGVTASRRHPGILWT
                     LNDSGNDAWIYAVDTLGRQHGAFEVADARNFDWEAIALGPCGNRDCLYIADTGDNDRA
                     RRSVIIYRVPEPPLPAEQARTAEAEALQFRYPRGRRDVEAAFVSSDGTIYLITKARDR
                     VPTVYRLLPEAWETGETVTAVEIGTLPIVSGSLGNRVTDAALSPSGRTVAVRTYLAIY
                     LFILTPEGILVPTGIACDAAGLQLQGEGISWLNDRVLVLTSEGGFGTRGTIVLLECGD
                     PRLST"
     gene            complement(3507..4196)
                     /gene="nth"
                     /locus_tag="VF061_01955"
     CDS             complement(3507..4196)
                     /gene="nth"
                     /locus_tag="VF061_01955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HEX6668290.1"
                     /translation="MKTRRRGPAGRPRPGRESASARADRARTIFGRLHEAYPDARCAL
                     DHSNAYQLLVATILSAQCTDARVNLVTPAFFARYPTPEHLARADRAEVEELIRSTGFF
                     RNKARSLLGMAQTLTADYGGQVPRSMDELQGLPGVGRKTANVILGNAYDINEGITVDT
                     HVTRLTRLLGLTRHADPVRIERDLMPLFPREDWALLSHLLIFHGRQVCIARRPRCPDC
                     VVADLCPSAAV"
     gene            complement(4193..5935)
                     /gene="polX"
                     /locus_tag="VF061_01960"
     CDS             complement(4193..5935)
                     /gene="polX"
                     /locus_tag="VF061_01960"
                     /inference="COORDINATES: protein motif:HMM:NF006375.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase/3'-5' exonuclease PolX"
                     /protein_id="HEX6668291.1"
                     /translation="METLKDFMDKKAVGDVLEQIAAFLELKGENPFRIRAFRTAARAI
                     AGFNGDLRQGLEDGSLAAAKGVGPATLQIAGELINTGRAGILEELREQIPPGLVEMLS
                     IAGLGVAKIRQIHDVLGIDSLPDLEAAAMDGRLARLPRFGQKTSENILKSIAFLRQAT
                     AYRLSHHAADEAEGLRAALEKLPGVTAAYVAGDVRRRSEVVRDMVMVLVADVAPGELF
                     KRLSQLPGVHEFAGQDERRLTLRFAGGASAQIVVTTPVNVGAVLVQATGSEEHVAQLA
                     KHASARGLALTGAALWRGSEFVYTPDEESLYRALGLAYLEPELREGRGEIAAAERDEL
                     PRLVERADLRGFLHCHTSYSDGSNSVEELALACRDAGYEWVGITDHSQAAAYAGGLKA
                     DDLLRQTDEIDGVNARLDGIRVLKGVEADILADGRVDFEERVLARLDFVIASIHSRFN
                     MTAAEMTSRLLTAMDNPYLTIIGHPTGRLLLSRDPYGLDLDLVIEKAAARGVALEINA
                     DPHRLDLDWRVLRRVREGGAMVSIGADAHNLAGIGHVDYGVGIARKGWLGPADILNTR
                     PADEFTAWARRRRP"
     gene            complement(5935..>6566)
                     /locus_tag="VF061_01965"
     CDS             complement(5935..>6566)
                     /locus_tag="VF061_01965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668292.1"
                     /translation="VAESSFPRIAASLAAGGHDPPDRDAFLMDREVITLLRDLRPDEG
                     VGEAMDQMVALVHHAYLTWAAGGLTIPIGRETAEELLGTLPQEGDDPGKVSPYYAQFP
                     ERMVWARVIEDEAPEPLDGVFVSRNQDALLRVLGIFGLRPDRPGFSAVEAAGPRAARL
                     TREDGTALFAPALPGAAAAGLRSITGEEELLELGWRTQGLAATVGSGEG"
BASE COUNT          941 a         2267 c         2356 g         1002 t
ORIGIN      
        1 gcccttggcg tccgcctcga tcggatcgcc cagcagcagg tgctgtggct tgatcgagcg
       61 cttccccacg aggattacga acgccttctt gggcgccggc tgcgccaggt agtggcccag
      121 ccgctcggtg aacccggccc gctcccgccg cagattgggc atcgcggcga tcatcgccac
      181 cgagtaccag ctcggggggt gggcctcggg gtgcagggcc agcaccttgc ccaccttgac
      241 gaaaggcttc tccgcgatgg ggccccggag aaactgggag atcaagctcg cgatcttgtg
      301 cccggccccc cggagccgag gatcctcggc gaacccggcc tcggccagag ccgcggaggc
      361 ggcctcgcgg atgttctccc gggcccagat gctggcctcc gggtcgctct tcaccagctt
      421 ctggagctcg aacatgagag cgggatcctc gtcccgcgag aggagccgga acaggacccg
      481 gtccgccagc ttgaagggcc ggctcgtgcg gggccactcc aactgcagca ggcgacggta
      541 gttggggatg gtgcctacat ccttgatccc ctgcgctgcg gacggggcga ggccgaggag
      601 gttcccgccc caggtaccgg tatccttctg cttcttgacc accgccaggg cggtcttgga
      661 ctcgcacacg gcctggtggg cggcttcgag cgcctccggc gtcgcgtacc cagccggggc
      721 gagctcggtc agcgtgcggt accggaggga cgccccggca ttctcgagca gccaggtgag
      781 cggaatccgg tgctggttcg gcagttccag gagcgctcct ggggaggggg cggaaacggg
      841 cgcaaaatag aggggatggg aagacggcgg tagggcgcat cttccccgag accctaagat
      901 ccggccggtt tgcgcctcgc cagccctgcc gcccggaact ccgagcctgc cgcccagtcc
      961 ggctgggtcg gtgcgttggc aatgcacact gctgtccgga cagtgacccg aagctgctga
     1021 atggcgccat cgtaggtgaa ccagggcagg atctcgtcgc tggcctggtg atatcgatcg
     1081 gcgatgtact tgtccttctg ctccttacca tagtccgccg gcttcccgac gtagctggag
     1141 ccgttctcga ccgaggtgcc gggcaccccc acccgcgcca gcgggaagtg gtccgaccgg
     1201 aagtatgaac cccggaggag cgcctcctcg ttgctgctca cctgcagccc ctccgcggag
     1261 gctgccgcgg tgaaggcctt tcccagggtg gactggtcga gaccgagggc ggatacatcc
     1321 gtcgttcgcc catagaggtt catcacgtcg aggttgagga tcgccgcgag gtcagccagg
     1381 gggaccggcg ggtcattggc cagggcctgc gagccgatga ggcccgactc ctccgccgcg
     1441 aagccgacga aggtgagcga ccgcgaggtt cgcaccccgc tccggacgaa ggcctcggcg
     1501 gcggcgagca cggcggcggt gccggaagcg ttgtcttccg caccgttgta gatcgagtcg
     1561 ccgttctgcg gcgtggcgat gccatagccg tcgtaatgtc ccccgatcag gaccgcctcc
     1621 ttggccagcg ggccgcggcc cggcaggcgg gcgagcacat tcgccgtctc cgtacggcgg
     1681 atcgtgctcc gaaccctgcc ctccagctcg aggccgagcg gaaccggcct gaatcccttg
     1741 cgcgcggcgg tggcggtgag ggccgcgagg tcctgaccac ccgcgctgaa caggtcctcg
     1801 gcggtccgtt tctggagcca gccggccacg atgagactgt cgggcgggct ctccagcctg
     1861 acctgggcac cggtccaccc cgagaggacg gtactccagg ggtaggtcgc gctctcgtcg
     1921 gtgtgaatca gcagcaggcc ggccgcgcct tggcgccggg cctcctcgat cttgtaggtc
     1981 cagcgaccgt agtaggtgag gatcttgccg cggaagagcg tcgagtcctg aagccccggg
     2041 tcgttcacca gcgcgaccac gatcttcccc ctcgcgtcga gccccgcgta atcgttccac
     2101 cccgcctcgg gtgccacgat cccgtagccg acgaagaccg cgtcgccgcg cacctggacg
     2161 ctggagtcgt ttcgcgccga ccagaggacg tagtcgtcct tccacttcag ctgccggggt
     2221 gagggcgccg cgatggcgag cgtcggcgtc ggcgtgagcg cgatgatcgg gacccgctgg
     2281 tagtagctgc cactgtcgcc cgccggctcc agccccaggc gccggaactg cgacgcgagg
     2341 tatttctggg ccaggtcgcc gccgcgcgtt cccggcgctc ggccctcgag cgcgtcgtcc
     2401 gccaggaact cgaggtggcc ccggagcacg tccccgctca gcgcggccgc cacgcgggcg
     2461 ccgggcgggc tgccctgctg cgcggtgagc gggacggcca ggaggggagc ggcggcgagg
     2521 aggcatgaca gtgcaagcgt cgggtgcatg cgggcttcct gattcgggtc caggggtcgg
     2581 tggtcaggtg gagaggcgag ggtcgccgca ctcgagaagg acgatcgtgc cgcgagtccc
     2641 gaagcccccc tcgctggtca ggaccagtac gcggtcgttc agccaggaga ttccttcgcc
     2701 ctggagctgc agccccgccg cgtcgcacgc gatcccggtg gggaccagga tgccctccgg
     2761 ggtgaggatg aagaggtaga tggccaagta cgtacggacc gccacggtgc ggcccgacgg
     2821 cgagagggcg gcgtcggtga cgcggttgcc caggctgccc gaaacgatcg gcagcgtgcc
     2881 gatctccacc gcggtcactg tctcgccggt ttcccaggct tcgggtagaa gccgatacac
     2941 cgtcggcacc ctgtctcgcg ccttggtgat caggtagatc gtgccgtcgg agctgacgaa
     3001 cgcggcttcc acgtcccggc gccccctcgg gtaacggaac tgcaacgctt ccgcttccgc
     3061 agtccgcgcc tgttcggccg ggagcggcgg ctccggcacc cgatagatga tgacactgcg
     3121 gcgggcccgg tcgttgtctc cggtgtccgc gatgtacagg cagtcccggt ttccgcaggg
     3181 ccccagcgcg atcgcctccc agtcgaagtt gcgcgcatcg gcgacctcga atgcgccgtg
     3241 ctgccgcccg agcgtatcga ccgcatagat ccaggcgtcg ttgccggaat cattgagggt
     3301 ccagagaata ccggggtgcc gccggctcgc ggtcacaccc gagctctcgc ctacgctccg
     3361 gtccctgaac aggccggtgc gtcgcggctc ggtcgtacgc cgcaggtccc aggtggtgtc
     3421 tcgcctcatg cgaggcgtga gtccggcggc cacggcgagg gcggcgagga gtgcgagacc
     3481 ggccaggagt acaacggcga gacgcgtcag acggcggccg acggacagag gtccgcgacc
     3541 acgcagtccg ggcagcgggg ccgccgggcg atgcacacct gtcgcccatg gaagatcagg
     3601 agatgggaga ggagtgccca gtcctcgcgg gggaagagcg gcatcaggtc ccgttcgatg
     3661 cgcaccgggt cggcgtgacg ggtgaggccc aggaggcgcg tgagccgggt gacatgcgtg
     3721 tccaccgtga tgccctcgtt gatgtcatag gcattgccga ggatcacgtt ggccgtcttc
     3781 cgccccacgc cgggcagtcc ctgcagctcg tccatgctgc gcgggacctg gccgccgtag
     3841 tccgcggtca gcgtctgggc catcccgagg agactgcgcg ccttgttgcg aaagaagccg
     3901 gtggagcgga tcagctcctc cacctcggcc cgatcggccc gggcgagatg ctcgggcgtg
     3961 gggtagcggg cgaagaacgc gggtgtcacc aggttcaccc gcgcgtcggt gcactgggcg
     4021 gagagaatgg tggcgaccag gagctggtag gcgttcgagt ggtcgagggc gcagcgggcg
     4081 tcgggatacg cctcgtgaag gcgtccgaag atggtacggg cccgatccgc tctcgcggac
     4141 gccgactcgc ggccgggtcg gggtcgtccc gccgggcctc gcctgcgggt cttcaaggcc
     4201 ggcggcgccg ggcccaggcg gtgaactcgt cggccgggcg ggtgttgagg atgtcggccg
     4261 ggccgagcca tcccttgcgg gcgatgccga cgccgtagtc cacgtgaccg atcccggcga
     4321 gattgtgcgc gtccgcgccg atggagacca tcgcacctcc ctcccgcacc cgccggagca
     4381 cgcgccagtc cagatccagc cggtggggat cggcgttgat ctccagcgcc actccccggg
     4441 ccgcggcctt ctcgatgacc aggtccagat cgagcccgta cgggtcgcgc gagaggagca
     4501 gccggccggt cgggtgaccg atgatggtga gatacgggtt gtccatcgcc gtgaggagcc
     4561 gggaggtcat ctccgccgcg gtcatgttga agcgggaatg gatggaggcg atcacgaagt
     4621 cgagtcgcgc cagcacccgc tcctcgaaat ccacccgtcc gtcggcgagg atgtcggcct
     4681 ccacaccctt gagcacccgg atgccgtcga gccgggcatt gactccgtcg atctcgtccg
     4741 tttgtcggag caggtcgtcg gccttgaggc cgccggcgta ggccgccgcc tggctgtggt
     4801 ccgtgatccc tacccattcg taccccgcgt cccggcaggc cagcgccagc tcctcgaccg
     4861 agttggagcc atcggagtag ctggtgtggc agtggagaaa cccgcggagg tccgcacgct
     4921 cgaccagccg cggcagctcg tcccgctccg ccgcggcgat ctccccccgc ccctcgcgca
     4981 gctccggctc caggtacgcg aggccgaggg cgcggtagag gctctcctcg tccggcgtgt
     5041 agacgaactc gcttccccgc cacagggccg cgccggtgag cgccaggccg cgcgccgagg
     5101 cgtgcttcgc cagctgcgcg acgtgctcct cgctgccggt ggcctggacc agcacggccc
     5161 cgacattcac cggcgtcgtc accacgatct gcgcgctcgc gccgccggcg aagcggaggg
     5221 tgagccggcg ctcgtcctga ccggcgaact cgtggacgcc cgggagctgg ctcagccgtt
     5281 tgaagagctc gccgggcgcg acatcggcca ccaggaccat gaccatgtcg cgcaccacct
     5341 cggaccggcg ccggacgtcg cccgccacgt acgcggcggt gacacccggg agcttctcca
     5401 gcgccgcgcg gagaccttcc gcctcgtcgg ccgcgtgatg ggagagccgg taggcggtcg
     5461 cctgccggag gaaggcgatg ctcttgagga tgttctccga cgtcttctgc ccgaagcggg
     5521 gcagcctggc caggcggccg tccatcgcgg cggcctcgag gtcggggagc gaatcgatgc
     5581 ccagcacgtc gtggatctgg cgaatcttgg cgacgccgag ccccgcgatg gagagcatct
     5641 ccaccagccc cggcgggatc tgctcgcgaa gctcctccag gatgcccgcg cggccggtgt
     5701 tgatcagctc gccggcgatc tggagcgtgg cgggccctac gcccttggcg gccgccagcg
     5761 acccgtcttc caggccctgg cgcaggtcgc cgttgaagcc ggcgatggcg cgcgccgcgg
     5821 tgcggaaggc ccggatgcgg aacgggttct cgcccttgag ctcgagaaag gccgcgatct
     5881 gctccagcac gtccccgacg gccttcttgt ccatgaagtc cttcagcgtc tccatcagcc
     5941 ctcgccgctg ccgacggtcg cggccagacc ctgggtgcgc cagccgagct cgagcagctc
     6001 ctcctccccg gtgatggacc gaagccccgc ggccgcggcg ccgggcaggg cgggtgcgaa
     6061 gagcgccgta ccgtcctcgc gagtgagtcg cgcggcgcgc gggccggcgg cctccacggc
     6121 gctgaagccc ggccggtcgg gtctgagccc gaagatcccc agcacgcgga gcagagcatc
     6181 ctggttgcgg gagacgaaga cgccgtccag gggttccggc gcctcgtcct cgatcacccg
     6241 ggcccacacc atccgctcgg ggaactgggc gtagtacggg gaaaccttcc ccgggtcgtc
     6301 tccttcttgc ggcagcgtcc cgagcagctc ctcggcggtc tcgcggccga tgggaatggt
     6361 gaggcccccc gcggcccagg tgagataggc gtggtggacc agcgccacca tctggtccat
     6421 tgcctccccc accccttcgt cggggcggag gtcgcgcagc agcgtgatca cttcgcggtc
     6481 catcaggaag gcatcgcggt cggggggatc gtgccctccc gccgcgaggc tggcggcgat
     6541 ccgggggaag ctcgactcgg cgacgc
//
LOCUS       DASUYN010000103         3750 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_251360, whole genome shotgun sequence.
ACCESSION   DASUYN010000103 DASUYN010000000
VERSION     DASUYN010000103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3750)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3750)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3750
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_251360"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(68..541)
                     /locus_tag="VF061_01970"
     CDS             complement(68..541)
                     /locus_tag="VF061_01970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668293.1"
                     /translation="MSGDALGTYLNDHLAGSVGAIALVERTIRENEGDPFAARLARVL
                     EEIRRDQAVLQDLIERVGASQDSIKKAGAWLAEMVGRVKLGGTDEPRELSRMEVLEML
                     GMGVLGKRALWRALRAVADRHEALRALDLDQLERRAVEQHDEVEAMRLEAARTAL"
     gene            complement(538..1008)
                     /locus_tag="VF061_01975"
     CDS             complement(538..1008)
                     /locus_tag="VF061_01975"
                     /inference="COORDINATES: protein motif:HMM:NF016955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerB family tellurite resistance protein"
                     /protein_id="HEX6668294.1"
                     /translation="MLDAIRTFVNRRILSPGEAPTGAPAPGPSGVPLAACALLLELAH
                     ADGVLSPSEQAHIERAVQRHFGLDDATARELIALADAERRQSIDHFQFTRLIAAEYDP
                     GQKMVLAELMWGVILADGELATHETWLVRKLAHLLELEPGYLSQARKSAVERRP"
     gene            1043..2296
                     /locus_tag="VF061_01980"
     CDS             1043..2296
                     /locus_tag="VF061_01980"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEX6668295.1"
                     /translation="MQGDSLVIQSSDTAETSRAAEVAVPEPSALAVRYHRSGNALWAG
                     ATALDLLLPAALLFTGLSARVRGLAARIARGRRFPTIALYGAAYVLIQALVFLPLSWY
                     AGFVRQHAYGLSTETASAWLRDWATAIGISSVVAALLLSIPYWLLRASPRRWWLWTGL
                     LTAPLTVLAMIVMPVYFDPLFDDYGRMRDRALEQRIQQLAARAGIPDSRIYEVRKSAE
                     TRRVNAYVAGFGGTKRIVLWDTLVDRLDRDELAFVVGHEIGHFVLRHTLTIIAAATLL
                     VTLSLYVVHRVAGTLLARFHRRFGFDRLDDVASLPLLSLVGGLVMLAAAPAGLALSRW
                     QEREADRFGLEITRNNPAAARAFVRLQVDNLAVPRTGLLFRLWRGSHPDLADRIEFAN
                     RYRPWSRGQPLRYGDRFRSAAPAAP"
     gene            2296..>3750
                     /locus_tag="VF061_01985"
     CDS             2296..>3750
                     /locus_tag="VF061_01985"
                     /inference="COORDINATES: protein motif:HMM:NF016800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HEX6668296.1"
                     /translation="MREPRTESPRPTAALLVLQAGAVLVVLAALPYHRFQLDRYTFIK
                     ELVLLAAALAATLLCLAAARRVAVFMVDTLLAGYLALSLVSTIFASNGWLATRALGVS
                     LASAGLFWSARAVARAGHARPLLVALAVAAVLGAVTGLFQAYGLFTTELASLTRAPGG
                     TFGNRNFMAHLVALGLPLLLLLTLQAKRRQTFLLGSAGLGLAVAALVLSRSRAAWLGA
                     LASLAFLAVEGLWSGRLWDDRPLRRRVSLLAGTALAGLVLAITLPNRLAWRSDSPYLD
                     SLTGVANFREGSGRGRLIQYGNTARMARDHPILGVGPGNWPVHYPRYMSPGDPSFDAD
                     DPIPTNPWPSSDWMAILAERGLPAFVLLILAGVSIALGAWARIRSETRRPPALDDLTI
                     VATLIAILVVGAFDAVLLLPAPAFLAWTAVGALASTARPIRDLALGPPVRRRIGLAVT
                     ALGAVLLARALAQVVAMALASSSGRDARELAARVD"
BASE COUNT          421 a         1429 c         1309 g          591 t
ORIGIN      
        1 acgagcagtc ggtcgggttt cccgcccgcc cgcgcggcat cttcgtcggg ctgtcctccg
       61 atgtccgcta gagcgcggtc ctcgccgcct ccagccgcat cgcctcgacc tcgtcgtgct
      121 gttccaccgc gcggcgctcg agctggtcca ggtcgagggc ccggagcgcc tcgtgacggt
      181 ccgccaccgc gcggagcgcg cgccagaggg cacgcttgcc gaggacgccc atcccgagca
      241 tctccagcac ttccatccgc gacagctccc gcggctcgtc ggtgccgccc agcttgaccc
      301 gtccgaccat ctccgccagc caggcgccgg ccttcttgat ggaatcttgg ctcgcgccga
      361 ctcgctcgat gagatcctgg agcaccgcct gatcccggcg gatctcctcc agcacgcgcg
      421 ccaggcgagc ggcgaaggga tcgccctcat tctcccggat ggtgcgctcc accagggcga
      481 tggcgcccac cgagccggcg agatggtcgt tgaggtaggt acccagcgcg tcgccgctca
      541 cgggcgccgc tccacggcgg acttccgggc ctgcgagagg taaccgggct ccagctcgag
      601 caggtgggcc agctttcgca ccagccaggt ctcgtgggtc gcgagctccc cgtcggcgag
      661 gatcactccc cacatcagct cggccagcac catcttctgg cccgggtcgt attcggccgc
      721 gatgagccgg gtgaactgga agtgatcgat ggactgccgg cgctccgcgt cggccagggc
      781 gatcagctcg cgggcggtgg catcgtcgag cccgaagtgc cgctggaccg cccgctcgat
      841 gtgcgcctgc tcgctcgggc tcaggacccc gtcggcatgc gccagctcga gcaggagcgc
      901 gcaggcggcc agcggcacgc ccgacgggcc gggggccggc gccccggtgg gagcctcgcc
      961 cggcgagaga atccggcggt tgacgaaggt gcggatcgcg tcgagcacgc cggtaaccta
     1021 ttcggagtag ctttccgtgg ccatgcaggg cgactccctc gtcatccagt catccgacac
     1081 cgccgagacc tcgcgggccg ccgaggtcgc ggtgccggag cccagcgcgc tggcggtgcg
     1141 ctaccaccgg agcggcaacg cgctctgggc cggcgcgacc gcgctcgacc tgctgctgcc
     1201 ggcggcgctc ctcttcaccg ggctttccgc ccgggtgcgc ggcctcgccg cgcgtatcgc
     1261 ccggggccgc cggttcccca ccatcgcact ctacggcgcg gcgtacgtgc tcatccaggc
     1321 cctggtgttc ctgcctctga gctggtacgc cgggttcgtc cgccagcacg cctacgggct
     1381 ctcgaccgag acggcatccg cgtggctccg tgactgggcc accgcgatcg ggatctcgag
     1441 cgtggtcgcc gcgctgctgc tgtccatccc gtactggctg ctgcgtgcca gcccgcggcg
     1501 ctggtggctg tggaccgggc tcctcaccgc cccgctcacg gtgctggcga tgatcgtgat
     1561 gccggtgtac ttcgacccgc tcttcgatga ctacgggcgg atgcgcgatc gagcgctgga
     1621 acagcggatc cagcagctcg cggccagggc cgggattccc gacagccgga tctacgaggt
     1681 gcgcaagagc gccgagacgc ggcgggtgaa cgcgtacgtc gcggggttcg gcggcaccaa
     1741 gcgcatcgtg ctgtgggata cgctggtgga ccggctggat cgggacgagc tggcattcgt
     1801 ggtggggcac gagatcgggc acttcgtgct ccgccacacg ctgacgatca tcgcggccgc
     1861 gacgctgctg gtgacgctct cgctctacgt cgtgcaccgg gtggccggca cactcctcgc
     1921 ccggttccac cggcggttcg ggttcgaccg gctggacgac gtggcctcgc tgccgctgct
     1981 ctcgctggtc ggtggcctcg tcatgctcgc cgcggcgccc gccgggctcg cgctctcccg
     2041 ctggcaggag cgggaggccg accgcttcgg cctggagatc acccggaaca accccgccgc
     2101 ggctcgggcc ttcgtgcggc tgcaagtgga caacctggcc gtcccgcgca ccgggctgct
     2161 gttccggctg tggcgcggca gccacccgga tctggcggac aggatcgagt tcgccaatcg
     2221 ctaccgcccg tggtcgcgag gccagccgct ccgctatggc gaccgcttcc gctcggcggc
     2281 gcccgccgcg ccctgatgcg agagccgcgg acggagtcgc cccggccgac agcggccctg
     2341 ctcgttctgc aggcgggcgc ggtcctggta gtactcgccg ccctccccta tcaccggttc
     2401 cagctcgacc gctacacctt catcaaggag ctggtgctcc tggccgcggc gctcgccgcc
     2461 acgctcctct gcctcgccgc cgcgcgccgg gtggcggtct tcatggtgga cacgctgctc
     2521 gccggctatc tcgcgctctc gctggtctcc accatcttcg cgagcaacgg ctggctggcg
     2581 actcgcgcgc tcggcgtctc gctggcgagc gccgggctgt tctggtccgc gcgcgccgtg
     2641 gcgcgggcgg ggcacgcgcg gccgctcctg gtcgcgctcg ccgtcgcggc ggtgctgggc
     2701 gcggtgacgg ggctgttcca ggcctacggc ctcttcacca ccgagctcgc gagcctgacc
     2761 cgcgcgccgg gcgggacgtt cgggaaccgg aacttcatgg cgcacctggt ggccctgggc
     2821 ctgcccctgc tcctgctgct cacgctccag gcgaagcgcc gccaaacttt cctgctcggc
     2881 tcggccggcc tcggtctcgc ggtggccgcc ctggtgctgt cccgctcgcg ggccgcgtgg
     2941 ctgggcgcgc tggcaagcct cgcgttcctc gccgtcgagg gactctggag cggccggctg
     3001 tgggacgacc gaccgctccg ccgacgggtg agcctgctgg ccggcaccgc gctcgccggc
     3061 ctggtgctcg cgatcaccct gccgaaccgg ctcgcctggc gctccgattc cccgtatctc
     3121 gactcgctca ccggcgtcgc gaacttccgc gagggaagcg gccgcggccg gctcatccag
     3181 tacggcaaca cggcgcgcat ggcgcgggac cacccgatcc tcggggtggg gccgggcaac
     3241 tggcccgttc actacccgcg ctacatgtcg cccggcgatc cctcgttcga tgccgacgac
     3301 cccatcccga ccaatccctg gcccagcagc gactggatgg ccatcctggc ggagcggggg
     3361 ctcccggcgt tcgtcctgtt gatcctcgcc ggcgtctcga tcgcgctcgg agcctgggcc
     3421 aggatccgga gcgagacccg ccggccgccg gcgctggacg acctcaccat cgtcgccacg
     3481 ctcatcgcca tcctggtggt cggcgccttc gacgcggtgc tgttgctccc ggcgcccgcc
     3541 ttcctcgcct ggaccgcggt cggcgcgctg gcctccaccg cccggccgat ccgggacctg
     3601 gcgctcgggc cgccggtgcg ccgccggatc ggcctcgcgg tcacggcgct gggcgcggtg
     3661 ctcctggccc gtgccctggc ccaggtggtg gcgatggcgc tcgcctcgag cagcggccgc
     3721 gacgcacgag agctcgccgc ccgggtggac
//
LOCUS       DASUYN010000104         3890 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1355785, whole genome shotgun sequence.
ACCESSION   DASUYN010000104 DASUYN010000000
VERSION     DASUYN010000104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3890)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3890)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3890
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1355785"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..890
                     /locus_tag="VF061_01990"
     CDS             <1..890
                     /locus_tag="VF061_01990"
                     /inference="COORDINATES: protein motif:HMM:NF014342.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DHHA1 domain-containing protein"
                     /protein_id="HEX6668297.1"
                     /translation="HLLSAVLHELGGHATVGVHFGRQSSTLDLDATALEHGRLVEAEV
                     RANEIVAENRAVEVSFEEPEQATGLRKASARERTLRIVTIRDLDRSACGGTHVRLTGE
                     IGPILIRKSERVRKNLRLEFLCGARAVRRARADLDLLARLAGHFSAAADELPALVEAQ
                     RAELRATASERRDLEESLAAYRASALHAATRADADGVRRIVVEEKGPVERLRPLAQAL
                     AALPGAMFVGWTADPPALLLSTSADSGLDAGATLRSALAVVGGRGGGNARLAQGTAAT
                     TAELERAVAGLRTSRAALP"
     gene            complement(887..2248)
                     /locus_tag="VF061_01995"
     CDS             complement(887..2248)
                     /locus_tag="VF061_01995"
                     /inference="COORDINATES: protein motif:HMM:NF014069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HEX6668298.1"
                     /translation="MTASLTLTTPVRDSAFRASEILSALSCALDITEGQPPGHAVRTC
                     LIGMRLAERVGVPMEDRGSLFYALLLKDLGCSSNAARLCSLFGADDRALKRDHKLTDW
                     SRPTRSLAYALRNSVPEASPMGRALRVASMLVHEKGSRREMTRTRCDRGADIAGMLGF
                     SRATREAIRTLDEHWDGNGMPEGLAGAAIPLLGRIVGLAQTVEVFASTFGVEAAIAVA
                     VERRGRWFDPLLVDALRSLEHDEELWANVLGRSPERHLSGLEPEDQILLADEERLDAI
                     ARAFARVIDAKSPYTYLHSERVAELAVTIGRRLHFSQDQLRNLRRAGLLHDIGKLGVS
                     TLILDKPDRLTERERAEVRVHPAYTQRILERVAAFADIVEIASAHHERLDGNGYHLGL
                     TGDRLSPMSRALAVADVYEATTADRPYRKGLPRHEAVAILRSLAGTALCPSSVEALAS
                     ELD"
     gene            complement(2238..3728)
                     /gene="dacB"
                     /locus_tag="VF061_02000"
     CDS             complement(2238..3728)
                     /gene="dacB"
                     /locus_tag="VF061_02000"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:NF014200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004175 - endopeptidase activity [Evidence
                     IEA];
                     GO_function: GO:0009002 - serine-type D-Ala-D-Ala
                     carboxypeptidase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine
                     carboxypeptidase/D-alanyl-D-alanine-endopeptidase"
                     /protein_id="HEX6668299.1"
                     /translation="MLQRLERTLTLVLCLACAPGAPLAAQELSPRERADLEAWFHRAS
                     ERTPGGLWGISIGTMDGRVLWSVSPELELIPASTTKLFTTGFSRARMGGGSRFTTRVI
                     ADGRLDSASGKWIGTWALQLGGDPTLDRAGRAGPTLRELARQLRERGVRVLEGPLAVT
                     SRTGPATSRYPSVWSPDYEGQLYAPPVGPVALHENTVSLTFRPGREPGAPPLLVSAYP
                     DGVSRMVRIAANTVGGRGRRLSLRSDPDGGWTLRGTLGIERKSAGLSAVAHDPSQLLI
                     SAWAAALDRAGIRWVDPGGPVLLAPRPASILAQVSSTSLDSIAVEVNRRSVNIGAELM
                     LQFAAGNQLTGPGLLTQHVRQVVGPSAKVHLVDGSGLSEFNRMSALTQMLYLARYPQL
                     PGNQRFPLLLPANGTGTLRRLRGGGMARGVVRAKTGTLDEVATLAGYLARQDGVLVLS
                     LMYNGRRTGAARAAEWEVFRLLGAEGVDLSGALDTHMGGSSPDNDR"
BASE COUNT          560 a         1414 c         1398 g          518 t
ORIGIN      
        1 agcatctcct gtcggccgta ctccacgagc tcgggggtca cgccacggtc ggggtgcatt
       61 tcggccgcca gagctcgacg ctcgacctgg acgcgaccgc gctggagcac gggcgtctgg
      121 tcgaggcgga ggtgcgcgcc aacgagatcg tcgcggagaa tcgggccgtc gaggtgagct
      181 tcgaggaacc cgagcaggcg accggactcc ggaaggcgtc ggcgcgcgag cggacgctcc
      241 gcatcgtcac catccgcgac ctcgaccgga gcgcgtgtgg cggcacccac gtccgcctca
      301 cgggggagat cggacccatc ctgatccgga aatccgagcg ggtgaggaag aacctgcggc
      361 tggagtttct ctgcggcgcg cgggcggtgc ggcgcgcccg cgccgacctc gatctgctcg
      421 cccgcctcgc cgggcacttc tcggccgcgg ccgacgagct ccccgccttg gtggaagcgc
      481 agcgcgcgga gctgcgggct acggcaagcg aacggcgcga cctggaggag agcctcgcgg
      541 cctaccgcgc cagcgcgctg catgcggcta cccgggctga tgccgatggc gtgcgcagga
      601 tcgtcgtgga ggagaaaggc cccgtcgagc ggcttcgccc gctggcgcag gcgctcgccg
      661 cgctgccagg cgcgatgttc gtgggctgga ccgcggaccc gcccgcactg ctcctctcca
      721 cctcggcgga ctcgggtctg gacgccgggg cgacgctccg gtcggcgctg gcggtggtgg
      781 ggggacgggg gggcggcaat gcccggctgg cacaggggac ggcggccacg accgcagagc
      841 tggagcgggc ggtagcaggt ctacggactt cccgcgcggc cctcccctag tccagctccg
      901 aggcgagcgc ctccaccgag gaggggcaga gcgccgttcc cgcgaggctc cggagaatcg
      961 ccaccgcctc gtgccggggc agccccttgc ggtagggccg gtccgccgtc gtcgcctcgt
     1021 acacgtcggc caccgcgagt gcccggctca tgggcgagag ccgatccccc gtcagcccca
     1081 ggtgataccc gttgccgtcc agccgctcgt ggtgcgcgct ggcgatctcc acgatgtcag
     1141 cgaacgccgc cacccgctcc aggatccgct gggtgtacgc cgggtgcacc cggacctccg
     1201 cgcgctcccg ctcggtcagc cggtccggct tatccaggat cagggtagag acgcccagct
     1261 tcccgatgtc gtgcagcagc cccgcgcggc ggaggttccg gagctggtcc tgggagaagt
     1321 gcagccggcg gccgatggtg acggccagct ccgcgacccg ctccgagtgc aggtacgtgt
     1381 agggggactt ggcgtcgatc acccgggcga aggcccgcgc gatcgcgtcg agccgctcct
     1441 cgtccgccag gaggatctgg tcttcgggct cgaggccgct caggtgccgc tccggtgagc
     1501 ggcccagcac attggcccag agctcctcat cgtgctcgag gctgcggagc gcgtccacca
     1561 gcagcggatc gaaccagcgc cctcgccgct ccacagccac cgcgatcgcc gcctccacgc
     1621 cgaaggtgct ggcgaagacc tccaccgtct gcgccagccc cacgatgcgg cccaggagcg
     1681 ggatggctgc ccccgccagt ccctccggca tgccgttccc gtcccagtgc tcgtccagcg
     1741 tgcggatcgc ctcgcgggtg gcgcgactga agccgagcat ccccgcgata tccgccccgc
     1801 ggtcgcaacg ggtccgcgtc atctcccgcc tgctgccctt ctcgtgcacc agcatagagg
     1861 cgacccggag agcccgcccc atgggcgagg cctcgggcac cgagttccgc agcgcgtagg
     1921 cgaggctccg tgtcgggcgc gaccagtccg tcagtttgtg gtcccgcttg agcgcccggt
     1981 catcggcgcc gaagagggag cagagccgcg cggcgttgct ggagcagccg aggtccttga
     2041 gcaggagcgc gtagaacagc gacccccggt cttccatcgg cacacccacc cgctcggcca
     2101 gccgcatccc gatcaggcag gtacgcacgg cgtgtcccgg cggctggcct tcggtgatgt
     2161 cgagcgcgca ggagagggcc gagaggatct ccgaggcccg gaatgccgaa tcgcggaccg
     2221 gtgtcgtgag agtgaggcta gcggtcattg tccggactgc tcccgcccat gtgagtgtcg
     2281 agtgcgccgc tcagatccac gccttcggcg ccgagcagcc ggaagacctc ccactccgcc
     2341 gcccgcgcgg cgcccgtgcg gcggccgttg tacatcagcg agagcaccag gacaccgtcc
     2401 tggcgcgcga ggtagcccgc cagcgtggcg acctcgtcca gggtgccggt cttcgcccgg
     2461 accacgccgc gcgccatccc cccaccccgg agccggcgca aggtgccggt gccgttggcc
     2521 ggcagcagga gtggaaagcg ctggttgccc gggagctgcg gataccgggc gagatagagc
     2581 atctgggtca gcgcgctcat gcggttgaac tcgctgaggc cgctgccgtc caccaggtgc
     2641 accttcgccg acggaccgac gacctggcgg acatgctggg tgaggagccc cgggcccgtc
     2701 agctggttgc ccgccgcgaa ctggagcatc agttccgcgc cgatgttcac gctgcgccgg
     2761 ttcacctcga ccgcgatgct gtcgagcgat gtggagctca cctgggccag gatcgaggcc
     2821 ggacgcggag ccaggagcac aggcccaccc ggatccaccc agcggatgcc cgcccggtcc
     2881 agcgcggcgg cccaggccga gatcaggagc tgcgacggat cgtgcgccac cgcgctcagc
     2941 ccggcgctct tccgctcgat gccgagcgtc ccgcgcaggg tccagccgcc gtccggatcg
     3001 gagcggagcg agagccggcg cccacgcccg ccgacggtgt tggccgcgat gcggaccatc
     3061 cggcttaccc cgtcgggata ggcgctcacc agcagcggcg gagcgccggg ctcccggccg
     3121 ggccggaacg tgagcgagac cgtgttctcg tgcagcgcca ccggtccgac cggcggcgcg
     3181 tacagctgtc cctcgtaatc aggcgaccac accgaggggt agcgcgaggt ggccgggccc
     3241 gtcctgctgg tgaccgcgag cggcccttcc agcacccgca cgccccgctc gcgcagctgc
     3301 cgggccagct cccggagggt cggtccggcg cgcccggcgc ggtccagggt gggatcgccg
     3361 ccgagctgga gggcccacgt gccgatccat ttgccgctcg ccgaatcgag acgcccatcg
     3421 gcgatcaccc gcgtcgtgaa gcgcgagccg ccacccatcc gggcccgcga gaatccggtg
     3481 gtgaagagct tggtggtgga cgccggaatc agctccagct cggggctcac gctccagagc
     3541 acccgcccgt ccatcgtgcc gatgctgatg ccccacaggc cgcccggggt ccgctcggac
     3601 gcccgatgga accaagcctc caggtccgcc cgctcccgcg gggagagctc ctgggcggcg
     3661 agcggggccc cgggagcgca ggcgagacac agcacgagcg tcagcgtccg ttccagacgt
     3721 tggagcatgc ggagtccgcc cgggggagag acgatcaccg aagcacggaa ttgcatggcc
     3781 tcgtggggca agcggtaggc caccggtaaa ccggttgtgg ctgaagggaa tagcacgatc
     3841 ccgccggccc gaagtcgtgc gatctgcgag ccaccctatg cagtgcttga
//
LOCUS       DASUYN010000105         4780 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1135829, whole genome shotgun sequence.
ACCESSION   DASUYN010000105 DASUYN010000000
VERSION     DASUYN010000105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4780)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4780)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4780
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1135829"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2444
                     /locus_tag="VF061_02005"
     CDS             <1..2444
                     /locus_tag="VF061_02005"
                     /inference="COORDINATES: protein motif:HMM:NF014871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0009166 - nucleotide catabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="5'-nucleotidase C-terminal domain-containing
                     protein"
                     /protein_id="HEX6668300.1"
                     /translation="TSDLVVALSHSGIAGPASYDTTGVGGEHVAGTFAGMAARPDVVI
                     VGHSHAEIRDSTLNEVLYVQPRPHAAAIAVVHVDMVRPRGRPWEVGRVRSELVSTAAA
                     TPAAAAEQRLRPAHDSVRAWVDQGVGTALGSMPAARGRALPTPIVDWVLEVQRRRAGA
                     TLASGPVFDLGASFPADTIRRRELLRLYPYENTLRAVRLSGQQLREYLERSVRYFRVD
                     AAGRISIDQAMPGYDFDLVRGARYDIDLRQPVGSRIRNLAVQGRAVGPTDSFTLALNS
                     HRQTGAGGYAMVARAPVVYDRGERIRELLEEELGRGPLDPGGLTPSEWRIVPEVSAKA
                     VREIYGIPADPLPVSASDTVVLRVFGTAGLRGALGSAGALAYAMDSLTAACACPTVRL
                     DGGGAGAGRAEVPVLNRMGFAAAALAERDFDRSGDSLPKRLAESRHPWLAANVFDSAT
                     GVRPPWLTPYRLIDTAGFRIAVLGYVTPDTKLHQPAERTAGLRFATGELGLHGALGEV
                     KAAKPSLTILVAHAGARCEGLRCDGELVRLAEELRGSGVDLILGGDGVTPVETRIAGM
                     PVVSPAGPGSLAVGDLVKTPAGGLELRTRIARVEPGPAPRGTPLAATLDTFARRSDSL
                     ARRAYAQLKRPLTREGRQHPLGAVIAEARRNLARADLGLVREASIRADLPAGPVTLAR
                     LREAEPAGADLLRLTLTGAQVQALLERAVDETDSPSVHLAGGRVRYDPRAPAGRRVRD
                     VTLTGGRKLKPRETYTLATDEATAAGAGGFSMLAGRPIERVGLLDAEAVAAYLRRLPQ
                     PVEVEASAAFQSTRR"
     gene            2453..2686
                     /locus_tag="VF061_02010"
     CDS             2453..2686
                     /locus_tag="VF061_02010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668301.1"
                     /translation="MRVFVNAVALEVDRGADVRAAVRTLDPELERKVAGGSAFVTDAR
                     GIEVAADSPLAEGSILRVVVSARRAGEERDAHP"
     gene            2673..3698
                     /gene="add"
                     /locus_tag="VF061_02015"
     CDS             2673..3698
                     /gene="add"
                     /locus_tag="VF061_02015"
                     /EC_number="3.5.4.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004000 - adenosine deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0043101 - purine-containing compound
                     salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine deaminase"
                     /protein_id="HEX6668302.1"
                     /translation="MLTRELIGRLPKAELHTHLDAALRPETMIELARGVRFELPTSSP
                     EELRRFMRVDNAANLEDYLARFEYTIPLLQSAEAIERVSYEMVEDAARDGIRYLEVRY
                     CPWLSRRQGLSMDRALEAELAGLAGGERDFGVVTRVINCSLRHYDPAVSLEIARLSVA
                     YRDRGVVAFDLAGGEAGRPAGAHAAAFDVALEGNLGITVHAGEAAGAASIADAVRRCH
                     ADRIGHGTRLHEDPALLRYVRDRRILLEINITSNVQTHAVPRASEHPVRRYVDQGVAV
                     TLCTDGWLMCGVALSDEYWMAHTALGFTREEIDRMILDGFAGAFLPWPERRALLEDVG
                     SELRALA"
     gene            3695..>4780
                     /locus_tag="VF061_02020"
     CDS             3695..>4780
                     /locus_tag="VF061_02020"
                     /inference="COORDINATES: protein motif:HMM:NF019285.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside transporter C-terminal
                     domain-containing protein"
                     /protein_id="HEX6668303.1"
                     /translation="MSGLWLLQTAAERMAEARAGLDTPMVERLVGVLGVVVMIGIAVL
                     LSHDRRRIDWRLVGAGLLLQALFGLVVLKTDAGRAFFDQVGSIVTGLLGFQEQGARFV
                     FGNLVQSTVPVGTPGADGGLDTTAGYVAATGAYFAFNVLPTIIFFSALMSVLYYLNVM
                     QLVVKSIAWVMQKTLRTSGAETLSASGNIFLGQTEAPLLIKPFVPTMTRSELNTVMVG
                     GFATVAGGVLAAYVGMLRGWFPDIAGHLLAASVMNAPAGLYLSKILMPETETPVTKGS
                     LRMEVEKPGVNVIEAAAGGAGQGMQLALNVGAMLMAFVALVALLNYLLGWLGGFVGQE
                     GLTLQLVLGQVLRPIAWVMGVPWSETSY"
BASE COUNT          603 a         1694 c         1787 g          696 t
ORIGIN      
        1 gcacctcgga cctcgtggtc gcgctctccc acagtgggat cgcgggcccc gccagctacg
       61 acactaccgg cgtggggggc gagcacgtcg cgggcacctt cgccggcatg gccgcgcggc
      121 ccgacgtcgt gatcgtcggg cactcccatg cggagatccg cgactccacc ctgaacgagg
      181 tgctgtacgt gcagccgcgg ccgcacgccg ccgccatcgc cgtggtccac gtggacatgg
      241 tccggccgcg cgggcgtccc tgggaggtcg gccgggtgcg ctccgagctc gtctccaccg
      301 ctgccgcgac acccgcggcg gcggcggagc agcggcttcg tccggcgcat gattcggtgc
      361 gggcctgggt ggaccagggc gtgggcacgg cgctggggtc gatgccggcc gcgcggggcc
      421 gcgccctccc gaccccgatc gtggactggg tgctggaggt ccagcgccgc cgggcgggcg
      481 ccaccctcgc ctcggggccc gtcttcgatc tcggcgcgag ttttcccgcc gacaccatca
      541 ggcggcgaga gctgcttcga ctctacccct acgagaacac gcttcgcgcc gtgcgtctct
      601 ccgggcagca gctccgcgag tacctggagc ggagcgtccg ctacttccgg gtggacgcag
      661 ccggtcggat ctcgatcgac caggcgatgc cggggtacga cttcgacctg gtgcgcggcg
      721 cgcggtacga catcgacctg cgccagcccg tggggagccg gatccgcaat ctcgccgtcc
      781 agggtcgcgc ggtgggtccc acggacagct tcaccctggc gctgaacagt caccggcaga
      841 ccggggcggg agggtacgcg atggtcgccc gggcccccgt cgtgtacgac cgcggcgagc
      901 ggatccggga gctgctggag gaggagctcg ggcgaggccc cctcgatccc ggcggcctca
      961 ccccctcgga gtggcgcatc gtccccgagg tgtcggcgaa ggcggtgcgg gagatctacg
     1021 ggattccagc cgatccgctg ccggtgtccg cgagcgacac ggtagtgctt cgcgtcttcg
     1081 gcaccgccgg gctgcgcggt gccctggggt cggccggcgc gctcgcgtat gcgatggaca
     1141 gtctcaccgc cgcctgcgcg tgccccacgg tccgcctcga cggcggcggc gccggcgccg
     1201 gtcgcgcgga ggtgccggtg ctcaaccgga tgggcttcgc ggccgccgcc ctggcggagc
     1261 gggacttcga ccgctcgggg gactccctgc cgaagcggct ggcggagtcc cgccatccct
     1321 ggctcgcggc caacgtgttc gacagcgcca ccggtgtccg tcccccctgg ctcaccccgt
     1381 accgcctgat cgacacggcc ggtttccgga tcgccgtcct cggctacgtc acgccggata
     1441 cgaagctgca ccagccggcc gagcgtacgg cagggctccg gttcgccacc ggcgagctcg
     1501 ggctccacgg cgcgctgggc gaggtgaagg cggcgaagcc ctcgctcacc atcctcgtcg
     1561 cccacgcggg cgcccggtgc gaagggctgc ggtgcgacgg agagctggtg cggctggccg
     1621 aagagctgcg cggcagcgga gtggatctga tcctcggggg agacggggtc acgccggtcg
     1681 agacccgaat cgccggcatg ccggtggtga gccccgcggg gccgggctcc ctcgccgtcg
     1741 gcgacctggt gaagacgccg gcgggcgggc tcgagctccg aacccggatc gcgcgggtgg
     1801 agccgggacc cgcgccgagg ggcacgcccc tggcggcgac gctcgacacc ttcgcccgcc
     1861 gaagcgacag tctggcgcgg cgggcctacg cccaactgaa gcgcccgctg acccgcgagg
     1921 gccgacagca cccgctcggc gccgtcatcg cggaggcccg ccggaacctg gcgcgcgccg
     1981 acctcggcct ggtgcgggag gcctcgattc gcgccgatct ccccgccggt ccggtcacgc
     2041 tggcgcgcct gcgggaggcc gagccggcgg gcgccgacct cctccggctc acgctcaccg
     2101 gggcacaggt ccaggcgctg ctggagcgcg ccgtggacga aacggactcg ccctcggtgc
     2161 accttgcggg cggacgggtg cgctacgatc cccgggcgcc ggcgggccga cgggtccggg
     2221 acgtgaccct gaccggtggg cggaagctga agccgaggga gacgtacacc ctggcgaccg
     2281 acgaagccac ggcggccggc gcgggtggct tttccatgct ggccggccgg ccgatcgaac
     2341 gggtcggact cctggacgcg gaagccgtcg ccgcctacct tcggcgcctc ccccagccgg
     2401 tcgaggtcga agcctccgcc gccttccagt ccacccgacg ttgagccccc gcatgcgcgt
     2461 cttcgtcaac gccgtggcac tcgaggtcga ccggggcgcg gacgtccgcg ccgcggtgcg
     2521 gacgctggac cccgagctgg agcggaaggt cgccggcggc tcggcattcg tcaccgatgc
     2581 ccgcggcatc gaggtcgccg ccgactcgcc gctcgcggag ggctccatac tcagagtcgt
     2641 ggtgagcgcc cggcgtgccg gcgaggagcg cgatgctcac ccgtgagctg atcggccggc
     2701 tgcccaaggc ggagctgcat acccacctcg acgccgccct ccgtccagag acgatgatcg
     2761 agctcgcgcg gggggtgcgg ttcgagctgc cgacctcgag ccccgaggag ctgcgccggt
     2821 tcatgcgggt ggacaacgcg gccaacctcg aggactatct cgcccgattc gagtacacca
     2881 tccccctgct gcagagcgcg gaggccatcg agcgggtctc gtacgagatg gtggaggacg
     2941 ccgcccggga cggcatccgc tacctggagg tgcgctactg cccctggctg agccggcgcc
     3001 aggggctctc catggaccgg gcgctcgagg cggagctggc cggtctcgcc gggggggagc
     3061 gcgacttcgg cgtggtgacc cgggtgatca actgctcgct gcggcactac gatccggccg
     3121 tgtcgctgga gatcgcgcgg ctgtcggtgg cgtatcggga ccggggcgtg gtcgcgttcg
     3181 acctggcggg cggcgaggcg ggccgccccg cgggggcgca cgccgccgcc ttcgatgtgg
     3241 cgctggaggg caacctcggc atcacggtgc acgcgggcga ggccgcgggg gcggcatcca
     3301 tcgcggacgc ggtccgccgg tgtcatgccg atcgcatcgg ccacggcacc cggctgcacg
     3361 aggacccggc gctgctgcgc tacgtgcgcg accgccgcat cctgctggag atcaacatca
     3421 ccagcaacgt gcagacccac gcggtgccgc gcgcctcgga gcacccggtg cgccgatacg
     3481 tcgaccaggg tgtggccgtg accctctgca ccgacggctg gctcatgtgc ggcgtcgccc
     3541 tgagcgacga gtactggatg gcccacaccg cgctcgggtt cacccgggag gagatcgacc
     3601 gcatgatcct cgacggcttc gccggtgcgt ttcttccctg gcccgagcgg cgggccctcc
     3661 tggaggacgt cgggtccgag ctgcgagcct tggcgtgagc ggcctctggc tgctccagac
     3721 ggccgcggag cgcatggccg aggcacgggc cggcctcgac acgccgatgg tggagcggct
     3781 ggtgggcgtc ctgggcgttg tagtcatgat cgggatcgcg gtgctgctct cgcatgaccg
     3841 tcgccggatc gactggcggc tggtcggggc ggggctgctg ctgcaggcgc tgttcggcct
     3901 cgtggtgctc aagaccgacg cgggccgggc gttcttcgat caggtcggga gcatcgtcac
     3961 cggcctgctg ggctttcagg aacagggcgc gcggttcgtg ttcggcaacc tggtgcagtc
     4021 gaccgtgccg gtgggcacgc cgggcgcgga cggcgggctc gacaccaccg ccggctacgt
     4081 cgcggccacc ggggcgtatt tcgccttcaa cgtcctgccg acgatcatct tcttctccgc
     4141 cctgatgtcg gtgctctact acctcaacgt gatgcagctg gtggtgaaga gcatcgcctg
     4201 ggtgatgcag aagaccctcc gcacctccgg tgccgaaacg ctgtccgcgt cgggcaacat
     4261 cttcctgggt cagaccgagg cgcccctgct catcaagcca ttcgtcccca ccatgacgcg
     4321 gtcggagctc aatacggtca tggtcggcgg cttcgccacc gtggcgggcg gcgtgctcgc
     4381 ggcgtacgtc gggatgctgc gcggctggtt ccccgacatc gcgggccatc tcctcgccgc
     4441 cagcgtgatg aacgcgccgg cgggactgta cctgtcgaag atcctgatgc ccgagaccga
     4501 gacgccggtg acgaagggct cgctccggat ggaggtcgag aagcccggtg tcaacgtgat
     4561 cgaggccgcg gcgggcgggg cgggccaggg gatgcagctc gccctcaacg tgggcgcgat
     4621 gctgatggcc ttcgtcgcgc tggtggcgct gctgaactat ctgctgggct ggctgggcgg
     4681 cttcgtcggc caggaggggc ttaccctgca gctggtgctg ggacaggtgc tgcggcccat
     4741 cgcgtgggtg atgggcgttc cctggagcga gacttcctac
//
LOCUS       DASUYN010000106         2751 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_475608, whole genome shotgun sequence.
ACCESSION   DASUYN010000106 DASUYN010000000
VERSION     DASUYN010000106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2751)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2751)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2751
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_475608"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..351
                     /locus_tag="VF061_02025"
     CDS             <1..351
                     /locus_tag="VF061_02025"
                     /inference="COORDINATES: protein motif:HMM:NF012880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016624 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEX6668304.1"
                     /translation="AVYQATDRAVRRAREQKLPSLLEVRTYRFMGHSMSDPIHGHYRT
                     KEEVEGQRKRDPIAVWSQRLIAEELIDEGDVKALDKEVIQEVEDAYQFADEAPEPEPE
                     ELYRDVYADERRER"
     gene            425..1414
                     /locus_tag="VF061_02030"
     CDS             425..1414
                     /locus_tag="VF061_02030"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex E1 component
                     subunit beta"
                     /protein_id="HEX6668305.1"
                     /translation="MATLTYRDALNQALREEMQRDPDVFLMGEEVGVYQGAYKVSRGL
                     LEEFGPMRVVDTPITELGFAGVGVGAAMVGLRPVIEFMTWNFALLAIDQLVNSAAKMR
                     YMSGGQVGVPAVFRGPGGSALQLASQHSQAFESYYAHVPGLQVVMPATPADAKGLLKS
                     AIRDDNPIVFIEGEMLYNTKGEVPEGEHLVPIGQADVKRSGGDVTVICHSKTVAIALK
                     AAEQLAGEGIEAEVVDLRTIRPLDTGTVLDSVARTHRCVVAEEGWPFAGVGAQVVDTI
                     QREVFDELDAPVIRVTGADVPMPYNKFLERAAKVDPGKIVAAVNQVLYREAEA"
     gene            1411..>2751
                     /locus_tag="VF061_02035"
     CDS             1411..>2751
                     /locus_tag="VF061_02035"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoamide acetyltransferase family
                     protein"
                     /protein_id="HEX6668306.1"
                     /translation="MSTKVVMEALSPTMEEGRLVEWKKQEGEPVAVGDVLAEVETDKA
                     VMELVARAGGTLLKQVIPAGTTVPVSELVAVIGEPGEQVGDGGKAGGARPPKAATTED
                     QQGTQPAPDRNRPSSMPPAPPAESLTEGNGQQPAPKPATPAVAAPATAAPQPSGRVKA
                     SPLARRMAAERGIDLASVSGSGPEGRVVARDLEGAAARVSAAPAGATPAPAAPPARSP
                     VPAAPRIPTGVPYADVPLTQIRKTIARRLAQSIGPIPTFYLTTEVDMERAAEARESLL
                     AAGGEKVSFNDIIIKATAMALKRHPECNAWWQDDHIRYWNEVHVSMAVAIEDGLITPV
                     IRHTDLKSLREIAAESRDLAGRARERKLKPEEYTGGTFSVSNLGMLDIDEFTAVINPP
                     ETGILAVGRMVPQPVVHEGAVAVRRRMRLTMSCDHRVVDGATGARFLQTLKGMLE"
BASE COUNT          454 a          923 c         1012 g          362 t
ORIGIN      
        1 gcggtgtatc aagccaccga tcgcgcggtg cggcgggccc gggagcagaa gctgccgtcg
       61 ctcctcgagg tccggaccta ccggttcatg ggccactcga tgtcggatcc gatccacggc
      121 cactaccgga ccaaggaaga ggtcgagggt cagcggaagc gcgacccgat cgcggtctgg
      181 tcccagcggc tcatcgccga ggagctgatc gacgaggggg acgtgaaggc gctggacaag
      241 gaggtcatcc aggaggtgga ggacgcctac cagttcgccg acgaggcgcc ggaaccggag
      301 ccggaggagc tgtaccggga tgtgtacgcg gacgaaaggc gtgaaaggtg aaacgtgaaa
      361 cgtgaaaggt ggccggccgc cttttcacct ttcacttttc acgctgttca accatggagc
      421 tcacgtggca accctgacct atcgagacgc cctcaaccag gcgctgcgcg aggagatgca
      481 gcgcgacccg gacgtcttcc tcatgggcga ggaggtcggg gtctaccagg gcgcctacaa
      541 ggtgagccgc ggactgctgg aggagttcgg gccgatgcgg gtcgtggaca cacccatcac
      601 cgagctgggc ttcgcgggcg tgggcgtggg ggcggcgatg gtcggactcc ggcccgtcat
      661 cgagttcatg acctggaact tcgcgctcct cgccatcgac cagctggtga actccgccgc
      721 gaagatgcgg tacatgtccg gtggccaggt gggcgtgccg gcggtgttcc gggggcccgg
      781 cggctccgcg ctgcagctcg cctcccagca ctcgcaggcc ttcgagagct actacgccca
      841 cgtcccgggg cttcaggtgg tgatgcccgc cacgcccgcg gacgcgaagg gcctcctcaa
      901 gagcgcgatc cgcgacgaca accccatcgt cttcatcgaa ggcgagatgc tctacaacac
      961 caagggcgag gtacccgagg gcgagcacct cgtgccgatc ggccaggccg acgtgaagcg
     1021 gagcggcggt gacgtcacgg tgatctgtca ctccaagacg gtggccatcg cgctcaaggc
     1081 cgcggagcag ctcgcgggcg aagggatcga ggcggaggtg gtggatctgc gcacgatccg
     1141 tccgctcgac accgggacgg tgctcgactc ggtggcccgg acccaccgct gtgtggtcgc
     1201 cgaggaggga tggccgttcg ccggcgtggg cgcgcaggtg gtggacacga tccagcgcga
     1261 ggtgttcgac gagctcgacg cgccggtcat ccgcgtcacc ggggccgacg tccccatgcc
     1321 gtacaacaag ttcctggagc gcgccgcgaa ggtggacccg gggaagatcg tggcggcggt
     1381 gaaccaggtc ttgtaccggg aagccgaggc atgagcacca aggtcgtgat ggaggcgctg
     1441 tcccccacga tggaggaggg acggctggtc gagtggaaga agcaggaggg ggagcctgtc
     1501 gccgtcgggg acgtgctcgc ggaggtggag accgacaagg cggtgatgga gctggtggcc
     1561 cgggcgggcg gcaccctgct gaagcaggtg atcccggccg gcacgaccgt gcccgtctcc
     1621 gagctggtgg ccgtgatcgg cgagcccggc gagcaggtcg gtgacggggg caaggctggg
     1681 ggcgcccggc ccccgaaggc cgccaccacc gaggaccagc agggaaccca gcccgcgccg
     1741 gaccggaacc gcccctcctc catgccaccc gcaccgcccg cggagtcact gacggaaggg
     1801 aacgggcaac agccggcacc gaagccggcg actccggcgg ttgcggcgcc cgcgaccgcg
     1861 gcgccgcagc ccagcggccg ggtgaaggcc tcgccgctgg cccgccgcat ggccgccgag
     1921 cgtggaatcg acctcgcgtc ggtctcgggc tccggtcccg agggccgggt cgtggcgcgc
     1981 gacctcgagg gtgccgccgc ccgggtctcg gccgccccgg cgggcgcgac cccggcgccc
     2041 gccgcgccac cggcccgctc gcccgtgccc gcggcgcccc gcattccgac cggcgtgcca
     2101 tacgcggacg tccccctcac ccagatccgc aagaccatcg cacggcggct cgctcagtcc
     2161 atcggaccca tccccacgtt ctacctcacg accgaggtgg acatggagcg cgcggccgag
     2221 gcccgggagt cgctgctcgc cgcgggaggc gagaaggtgt cgttcaacga catcatcatc
     2281 aaggcgacgg cgatggcgct caagcggcac ccggagtgca acgcctggtg gcaggacgac
     2341 cacatccggt actggaacga ggttcacgtc agcatggcgg tggcgatcga ggacggcttg
     2401 atcacgccgg tgatccgcca caccgacctc aagtcgctgc gggagatcgc cgccgagtcg
     2461 cgggacctcg ccggccgggc ccgggagcga aagctcaaac ccgaggagta caccgggggc
     2521 acgttctcgg tctccaacct cggcatgctg gacatcgacg agttcaccgc ggtgatcaat
     2581 ccgccggaga ccggcattct cgcggtcggc cgcatggtgc cgcagcccgt ggtgcacgag
     2641 ggcgccgtcg ccgtccggcg gcggatgcgg ctcaccatgt cgtgcgacca ccgggtggtc
     2701 gacggcgcca ccggcgcgcg gttcctgcag acgctcaagg ggatgctgga g
//
LOCUS       DASUYN010000107         3649 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1576886, whole genome shotgun sequence.
ACCESSION   DASUYN010000107 DASUYN010000000
VERSION     DASUYN010000107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3649
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1576886"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..181)
                     /locus_tag="VF061_02040"
     CDS             complement(<1..181)
                     /locus_tag="VF061_02040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668307.1"
                     /translation="MSTRSSIIAGVVVLAALSCRDDTNAPDDARSPTEPALGAAAATL
                     PAHTAGVRLITAGGTY"
     gene            346..2097
                     /locus_tag="VF061_02045"
     CDS             346..2097
                     /locus_tag="VF061_02045"
                     /inference="COORDINATES: protein motif:HMM:NF017745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF885 domain-containing protein"
                     /protein_id="HEX6668308.1"
                     /translation="MTMARSTRLLAVAALAAAAACAPASSPKPADGVATALRVAQEFV
                     DGYYHQFPEEAFEVGYPDTPMDRLGDRGAAAMAAWRAREDRWLAELRSVRPADLEGTD
                     AEVPYGFTLDRLEASEGRRVCRAELWNVSPTWTGWQSMLASTFAVQPVGTAAERADAI
                     ARLRAVPAYLDTEVANLRAGTAAGYLAPASNVAAVLRQVDALLAAPEASPFHEPASRA
                     DDVSFTRDVRGIVADSIFPAIRRYRAFLADEYRGRATAGVSANPDGAACYAASLRFHT
                     SLALDPREVHETGLREMRRIQASMAGIARRSFGTDDVKALLERLRTDPRYTFRSEADV
                     IAYAQAAVDRAAVRMPDWFGVVPDARVVIKPFPAYQQASGGGFYSSGSLDGTRPGTYE
                     LGTYRPETISKAGMEATAFHETYPGHHLQMSVALYGKGVHPVLRYIYVPAMAEGWGLY
                     SELLADEVGLYSADLDRLGMYSNLAWRAARLVVDPGMHVLGWTRDRAIQYMLDHTAES
                     RGSVEPEVDRYLAAPGQATAYLTGSLEIQRLRREAESRLGRRFDIKGFHDTVLRDGAV
                     TLPMLQRAVERWVATAR"
     gene            complement(2114..2272)
                     /locus_tag="VF061_02050"
     CDS             complement(2114..2272)
                     /locus_tag="VF061_02050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668309.1"
                     /translation="MFRVLAAGWLTRRLAGPISRAIPNPFLRAAAIAGAGVVATRLLR
                     AGPAKGRR"
     gene            complement(2428..2940)
                     /locus_tag="VF061_02055"
     CDS             complement(2428..2940)
                     /locus_tag="VF061_02055"
                     /inference="COORDINATES: protein motif:HMM:NF019095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHRD domain-containing protein"
                     /protein_id="HEX6668310.1"
                     /translation="MKTAYGVRLAAAVLLAAVPACGDDEDDNGSAATEFDAALSGEEE
                     VPPVPTTATGTAAVSIDGGQIAYRVEVNGLANAVAAHIHVAPSGDNGPVRMNLCGTGA
                     PLPPCQSGTGVLAEGSNATAEGITFDSLVSAMRAGNTYVNVHTDDGEGAQNTGPGDMA
                     SGEIRGQLAP"
     gene            3170..>3649
                     /locus_tag="VF061_02060"
     CDS             3170..>3649
                     /locus_tag="VF061_02060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668311.1"
                     /translation="MTLSAVAGRDVGAQTVLDRTPNLAGAWVGSAGVLHFNFLHRFSI
                     SSAPERKVTSTPTFLLGAGLPGRTLVGVHYATNSELSPRYPNEWELFGRFAPLDQELG
                     SPVDAALQAGYNLAAEGLDAEASVARREGPVRVLAALRVLAEPGEASGADLALAAGAA
                     "
BASE COUNT          493 a         1315 c         1275 g          566 t
ORIGIN      
        1 tgtacgtgcc gcccgcggtg atcaaccgga cacccgccgt gtgtgccggc agggtcgcag
       61 ccgcagctcc cagagcgggc tcggtgggtg acctggcatc gtcgggtgcg ttggtgtcat
      121 cgcggcagct gagcgcggcg aggaccacca cgcccgcgat gatggaggat cgtgtcgaca
      181 taggggcctc gattccgttg gcgatgcccg gagcaccccg cggagaaccg ttaccgaagc
      241 actccggctg ccccgacctt acagcagtgt gcctgaaacg aggtggaaag gcgcgtgaac
      301 gaccccttat ctgcaccgcc agtgccaccc tggggagctg acacgatgac catggcccgc
      361 tcgactcgcc tcctcgccgt agccgccctc gccgccgcgg ccgcctgcgc acccgcatcc
      421 tccccgaagc ccgcggatgg cgtcgcgacc gcacttcgcg tcgcgcagga attcgtcgac
      481 gggtactacc atcagttccc cgaggaagcg ttcgaggtcg gctatcccga cacgccgatg
      541 gatcggctgg gcgaccgcgg agcggccgcg atggcggcct ggcgggctcg cgaagaccga
      601 tggctggccg agctgcgctc ggtccgcccg gccgatctcg agggcaccga tgccgaggtc
      661 ccctacgggt ttacactcga ccggctggag gcgtccgagg ggcggcgcgt ctgccgcgcc
      721 gaattgtgga acgtgagccc gacctggacg gggtggcaga gcatgctcgc ctccacgttc
      781 gcggtgcagc cggtgggaac cgcggcggag cgcgccgatg cgatcgctcg cctccgggcc
      841 gtccccgcct acctcgacac cgaggtcgcg aacctgcggg ccgggacggc ggcgggctac
      901 ctcgctccgg cctcgaacgt cgccgccgtg ctccgacagg tcgatgccct gctcgccgcg
      961 ccggaagcgt cgccgttcca cgagccggcg tcacgggcgg acgacgtgtc cttcacccgc
     1021 gacgtgcgtg gcatcgtcgc cgattcgatc ttcccggcga tccggcgata ccgtgccttc
     1081 cttgcggatg agtaccgggg acgggccacc gcaggcgttt ccgccaaccc cgacggcgcc
     1141 gcctgctacg cggcctcgct gcggttccat acgtcgctcg cgctcgaccc gcgcgaggtg
     1201 cacgagaccg ggttgcgcga gatgcggcgc atccaggcct ccatggccgg catcgcgcgg
     1261 cggagcttcg gcaccgacga cgtgaaggcg ctgctcgagc ggctgcggac cgacccgagg
     1321 tacacctttc gctccgaggc cgacgtcatc gcgtacgccc aggcggcggt ggaccgggcc
     1381 gcggttcgca tgcccgactg gttcggcgtc gtgcctgacg cccgggtggt gatcaagccc
     1441 ttcccggcct atcagcaagc ctcgggtggc ggcttctact cgtccggttc gctggacggc
     1501 accaggcccg gaacctacga gctgggcacc taccggccgg agaccatcag caaggccggc
     1561 atggaggcca cggcctttca cgagacctat cccggccacc acctgcagat gtcggtcgca
     1621 ttgtacggca agggagtgca ccccgtcctg cgctacatct acgttccggc gatggcggag
     1681 ggctggggtc tgtactcgga gctgctggcc gatgaggtgg gcctctacag cgcggacctg
     1741 gaccggctgg ggatgtactc gaacctggcg tggcgggccg cccgcctcgt ggtggacccc
     1801 ggcatgcacg tgctcggctg gacccgcgac cgcgccatcc agtacatgct cgatcacacc
     1861 gcggagtcgc gcggctccgt cgagcccgag gtggaccgct atctcgccgc gccgggccag
     1921 gccaccgcct acctgaccgg aagcctcgag atccagcgcc tgcgccgcga ggccgagagc
     1981 cggctcggtc ggcggttcga catcaagggc ttccacgaca ccgtcctccg cgacggcgcg
     2041 gtcaccctgc cgatgctgca gcgggcggtg gagcgctggg tggcgacagc ccgctgaccc
     2101 gggttcccga aggttaccgc cgccccttgg ccggccctgc ccggaggagc cgggtcgcga
     2161 cgaccccggc gcccgcgatc gcggccgccc gaaggaaggg attgggaatc gccctgctga
     2221 tcggaccggc gagccgccgg gtgagccagc ctgctgcaag cactcgaaac atgggatgtc
     2281 cgccgttcgg gtgaaggatg cgtggtccgc gccgatgcgt ggtccgcgcc aatggtgcgc
     2341 ggacggtaag ccccctgggg acaccgcggc catgacctcc gtcactgaat ttggcggtcc
     2401 gcgggcgaga cgccgagccc gcgccggcta gggcgcgagc tgcccccgga tttccccgct
     2461 cgccatgtcg cccggaccgg tattctgcgc cccctcgccg tcgtcggtat ggacgttcac
     2521 gtaggtgttt cccgcccgca tcgccgacac cagcgagtcg aaggtgatcc cctccgccgt
     2581 ggcgttcgac ccctcggcga ggacgccggt gccgctctgg cagggcggga gcggggcgcc
     2641 ggtgccgcac aggttcatcc gcaccggccc gttatcaccc gagggcgcca cgtggatgtg
     2701 cgcggccacg gcgttcgcca gtccattcac ctccacccga taggcgatct ggcctccgtc
     2761 gatcgagacg gccgccgtgc cggtggcggt cgtcggcacc ggcggtacct cctcctcccc
     2821 gctgagcgct gcatcgaatt cggtggcggc cgacccgttg tcgtcctcat cgtcgccgca
     2881 ggccgggacc gcggcgagca gcacggccgc ggcgagcctc acaccatatg cggtcttcat
     2941 gtccggcttc ctttctgtcc tcgtcatgtc tcgagctcca tcgtgcggat caccccgccg
     3001 gaccacggta ctgccggccg tgccgcggtt cttgcaccct gctagcgcgt ttgcagccgg
     3061 gaagcggcca gcacccgcta ggggaataca agcccgctac cggcgtgcaa gaattcgttt
     3121 ccggcatccg ctatctacgg gcatgctgcg tcgaggctgc ctcgttgtcg tgaccctctc
     3181 cgccgtggca ggtcgcgacg tcggcgccca gacggtcctc gatcggacgc cgaacctcgc
     3241 cggcgcctgg gtgggatccg ccggggtgct gcatttcaac ttcctgcacc gcttctcgat
     3301 cagctcggcg ccggagcgga aggtcaccag cacgcccacc ttccttctgg gtgccgggct
     3361 tcccgggcgg acactggtgg gcgtccacta cgcgaccaac tccgagcttt cgccccgtta
     3421 ccccaacgag tgggagctgt tcgggcggtt cgcgccgctg gaccaggagc tcggcagccc
     3481 ggtggacgcg gcgctgcagg cgggttacaa cctcgccgcg gagggattgg acgccgaggc
     3541 ttcggtggct cggcgggaag ggccggtgcg ggtgctcgcg gcactgcgag tcctggcgga
     3601 gccgggggag gcgtcggggg ccgatctcgc gctggcggcg ggtgcggcg
//
LOCUS       DASUYN010000108         2327 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1797455, whole genome shotgun sequence.
ACCESSION   DASUYN010000108 DASUYN010000000
VERSION     DASUYN010000108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2327)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2327)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2327
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1797455"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            318..1943
                     /locus_tag="VF061_02065"
     CDS             318..1943
                     /locus_tag="VF061_02065"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEX6668312.1"
                     /translation="MLLATAGPAAAQSGEWTTYGGNDWNQRYSQLKTINTSNVAQLVP
                     RMIFQTGIARLGSFENTPIVSNGVMYVTTPYNTAMAYDLTTKKELWRYEHKLGTTIFC
                     CGPNNRGVAIHGGAHVYMGTLDARLVALDAKTGAVLWDKEVADPAFGYSITHAPLIIG
                     DNVIVGVSGGEYGIRGHVTAYNAGTGEQVWRWYSIPAPQGDPTFDDKAPNGWWGTWAG
                     ETLDGANLNRDVAKEKGDSAKYADAWTRGGGGVWMTPAYDKASNTIYVAVGNPSPDLD
                     GSVRPGDNLYTDCVVAIDATTGKTKWYYQTVPHDVWDLDAVSPPVVTKLGGKTVVVHA
                     GKTGWMYVLDAESGKLVRRSDAFVPQENMFALPTPEGTRMLPGANGGAEWSPIAIDPT
                     LDYAFVAALHQPMHYKVHNAPWEKGRLWLGSAFVAIPGEEQYGLYSAVNLKTGKIAWQ
                     NKVPQPMMGGALATAGGLTFTGEGNGNFNAYNSKTGKLLWQFNGGAGCNSAPMSFTHG
                     GEQFIAVACGGNFQLSFPLGDAVLVFGLPKARK"
     gene            2010..>2327
                     /locus_tag="VF061_02070"
     CDS             2010..>2327
                     /locus_tag="VF061_02070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668313.1"
                     /translation="MKHWWWTALGAAGFLAGRAWPAQEPDGHWIARDGAAWRRLGHEA
                     QTAYAEGFLAGAAFGQAAGETCPGGCTLAADSAGLTDAMARLRKSGGFRLPFGSNVYA
                     SRIS"
BASE COUNT          407 a          793 c          796 g          331 t
ORIGIN      
        1 tgtaaaccag attgtgactc cgtcaatcac ttagcgctcc gaaccacccg gtgcccgcac
       61 agggcaccat catcgcggcc ctgtgccgca ctacccataa cgactccacc gaggtgcagg
      121 accgggctgc cgggtttgcc gcgccgccgt cttgcagcga gaggctcaga ggtgggcggc
      181 attcgccgcc agccgaggtg ggcccgtcgg tcacgcaaca gggccctcgc cgaccgcgac
      241 ctgccgcggc cgggcgcacc gtaatccgcg ggaggagagt gcctatgagg atgagttcgg
      301 gttggtgcgg tgccctagtg ctcctggcca cggccggccc ggccgccgcg cagagcggcg
      361 agtggacgac ctacggcggc aacgactgga accagcgcta ttcgcagctg aagacgatca
      421 acacgtcgaa cgtcgcccag ctggtcccgc gaatgatctt ccagaccggc atcgcccggc
      481 tgggctcgtt cgagaacacc ccgatcgtca gcaacggagt catgtacgtc accacgccct
      541 acaatacggc gatggcgtac gacctgacga cgaagaagga gctctggcgg tacgagcaca
      601 agctgggcac cacgatcttc tgctgcgggc cgaataatcg cggcgtcgcg atccacggag
      661 gggcccacgt ctacatggga accctcgacg cccgcctggt cgccctcgat gccaagaccg
      721 gcgcagtcct ctgggacaaa gaagtcgccg atcccgcctt cggatacagc atcacccacg
      781 cgccgctcat catcggggac aacgtcatcg tcggcgtgtc cggcggcgag tacggcatcc
      841 gcggccacgt gaccgcgtac aacgccggca cgggtgagca ggtgtggcgc tggtactcga
      901 tcccggcccc tcagggcgat ccgaccttcg acgacaaggc tccgaacggc tggtggggca
      961 cctgggccgg cgagacactc gacggggcca acctcaaccg cgacgtcgcc aaggagaagg
     1021 gcgacagcgc caagtatgcc gatgcctgga cccgcggcgg cggcggggtg tggatgacgc
     1081 ccgcctacga caaggcctcc aacacgatct acgtggcggt gggcaatccg tcacccgacc
     1141 tcgacgggag cgtccggccg ggcgacaatc tctacaccga ctgcgtggtg gcgatcgacg
     1201 ccacgaccgg caagaccaag tggtattacc agacggtgcc gcacgacgtg tgggacctcg
     1261 acgcagtatc gccgcccgtg gtgactaagc tgggcggcaa gacggtcgtg gtgcacgccg
     1321 gcaagaccgg ctggatgtac gtgctcgacg cggagagcgg caagttggtc cgccggagcg
     1381 acgcgttcgt gccccaggag aacatgttcg ccctgccgac gccggaaggc acccggatgc
     1441 tgcccggcgc caacggcggc gcggagtggt cgccgatcgc gatcgacccg accctggatt
     1501 acgcctttgt cgcggcgctg caccagccga tgcactacaa ggtgcacaac gcgccgtggg
     1561 agaagggccg cctctggctc ggctccgcct tcgtcgcgat tccgggcgag gagcagtacg
     1621 ggctctattc cgcggtcaac ctcaagaccg ggaagatcgc ctggcagaac aaggtccccc
     1681 agccgatgat gggtggcgcc ctcgccaccg cgggcgggct caccttcacc ggcgaaggca
     1741 acggcaactt caacgcttac aactccaaga ccggcaagct gctgtggcag ttcaacggcg
     1801 gcgccggctg caactccgcc cccatgagct tcacccacgg gggcgagcag ttcatcgcgg
     1861 tcgcctgcgg cggcaatttc cagctcagct tcccgctggg tgacgcggtg ttggtcttcg
     1921 ggcttccgaa ggccaggaag taagccgacg acaccggtcg gtgagcgccc gcggtgctgg
     1981 gctctcatcg gccgcttcgt ttgggaacga tgaaacactg gtggtggacg gccctcgggg
     2041 ccgcggggtt cctggccggc cgagcctggc cggcgcagga gccggatgga cactggatcg
     2101 cccgcgacgg ggcggcctgg aggcggttgg ggcacgaggc ccagaccgcg tacgccgagg
     2161 ggttcctggc cggggcggca ttcggccagg cagccggtga gacctgcccc gggggttgca
     2221 ccctcgcggc cgactccgcc ggactgaccg acgcgatggc gcggctgcgc aagagcggcg
     2281 gcttccggct ccccttcggc agcaacgtct acgcgagccg gatcagc
//
LOCUS       DASUYN010000109         2158 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_255077, whole genome shotgun sequence.
ACCESSION   DASUYN010000109 DASUYN010000000
VERSION     DASUYN010000109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2158)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2158)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2158
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_255077"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..582
                     /locus_tag="VF061_02075"
     CDS             <1..582
                     /locus_tag="VF061_02075"
                     /inference="COORDINATES: protein motif:HMM:NF036531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668314.1"
                     /translation="GGAPVFYFLTATVVPRRAPVRPADRGIQVERWYESYETGNPVTE
                     AAEGELVRVRLRLSVPAERHFVILDDALPAGLEAVDLSLRTVGGLPGPGTADTAAAEP
                     PTDGEDGTMRWVYGTWDAGWWSPFDHREMRDERVVFAATRLWPGSYTATYLARATTPG
                     RFARPPAHAEEMYNPAVFGESDGGVFTVRAVER"
     gene            579..>2158
                     /locus_tag="VF061_02080"
     CDS             579..>2158
                     /locus_tag="VF061_02080"
                     /inference="COORDINATES: protein motif:HMM:NF013106.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase domain-containing protein"
                     /protein_id="HEX6668315.1"
                     /translation="MRESRLGHASRLAVAAAVACASVIGAGTVWITRPLPAGLLDTGA
                     PTITLEDRVGRQLRTTRAPDGSRGGWLPLAEMDADLLGAFLAAEDHRFQRHPGVDPRA
                     LLRAAWSNLRAGRVVSGGSTITMQVARMLRPLPRTWSGKARQVLWALRLERSLGKHAI
                     LEQYLNRVPLGQGTRGVQAAAALYFGAGAGDLSLGQAALLAGLARAPSGDNPLLSPIR
                     ARARRAQALGRLVALGFAPESAAQRARAEPLLERRGGPAFLAPHFTTRVLGWADRQGV
                     RQGRVRTSLDLALQGELEREVRHAVETLADRGAKHAAAVVLDNASGEVLAWVGSPDFW
                     ADTAGQVDMVVSPRQPGSALKPFLYALAFDRGTTPATVLPDIARVYQTGTGPYRPRNY
                     DRRFHGPVRTREALASSYNVPAVELASRLGAGSLLHVLRGAGFASLGRSADHYGPGLA
                     LGNGDVTLLELANGYRGLANLGVWRPYAWRAASPGAPPQPGRRFASPRSAALVLDILA
                     DPVARIPGFGLESTLDFP"
BASE COUNT          258 a          791 c          805 g          304 t
ORIGIN      
        1 ggcggcgccc cggtcttcta cttcctgacg gcgacggtgg ttccgcgacg cgccccggtg
       61 cgcccggccg atcgggggat ccaggtcgag cggtggtacg agagctacga gaccgggaac
      121 ccggtcaccg aggcggccga aggcgagctg gtgcgcgtga ggttgcggct cagcgtgccc
      181 gcggagcgcc acttcgtgat cctggacgac gccctgcccg ccggtctcga ggcggtggac
      241 ctgagccttc gaaccgtcgg agggttgccc gggccgggca cggcggacac cgccgcggcc
      301 gagccgccga ccgacggcga agacgggacg atgcgctggg tgtacggaac ctgggacgcg
      361 ggctggtggt cgcccttcga ccaccgggag atgcgggacg agcgcgtcgt gttcgcggcc
      421 acccggctct ggcccggcag ctacacggcg acctacctcg cccgggcgac cacaccgggc
      481 aggttcgcgc gcccgccggc gcacgcggag gagatgtaca acccggccgt gttcggcgag
      541 agcgacggtg gagtcttcac ggtgcgcgcg gtcgagcggt gagggagtcg cggctgggtc
      601 atgcgtctcg cctggccgtc gccgcagccg tggcctgcgc ctcggtgatc ggcgccggca
      661 ccgtgtggat cacccgcccg ctgccggccg gactgctgga cacgggtgca cccacgatca
      721 cgctggagga ccgggtcggg cgccagctcc gcaccacccg cgcacccgac ggcagccggg
      781 gcggctggct cccgctcgcg gagatggatg ccgacctgct cggggccttt ctcgcggcgg
      841 aggaccaccg gttccagcgg catccggggg tggatccgcg cgcgttgctg cgcgccgcct
      901 ggtcgaacct gcgcgccggc cgagtggtgt cgggtggctc gacgatcacc atgcaggtgg
      961 cgcgcatgct gcgacccctg ccgagaacct ggagcggcaa ggcgcgccag gttctgtggg
     1021 cgcttcggct cgagcggagc ctcggcaagc acgcgatcct ggagcagtac ctcaatcgcg
     1081 tgcccctggg ccagggtacc aggggcgtgc aggcggccgc ggctctctat ttcggagccg
     1141 gagccggcga tctgagcctg ggccaggctg cgctcctcgc gggactcgcc cgcgcgccgt
     1201 ccggggacaa tccgctgctc tcacccatcc gcgcgcgggc acgccgggcg caggcgctgg
     1261 ggcggctggt cgcgctgggc ttcgcgcccg agtccgcggc ccagcgggcc cgcgccgagc
     1321 cgctgctgga gcgacgtgga gggcctgcgt tcctcgcccc gcacttcacg acccgggtcc
     1381 tgggctgggc cgaccgccag ggcgtgcgac agggcagggt gcggacctcg ctcgacctcg
     1441 cgctccaggg cgagctggag cgcgaggttc gccatgcggt cgagacgctc gccgatcgcg
     1501 gcgcgaagca cgccgccgcg gtcgtcctcg acaacgcgag tggggaggtg ctcgcctggg
     1561 tcgggtcgcc cgacttctgg gccgacaccg ccgggcaggt ggacatggtg gtgagcccgc
     1621 gccagcccgg ctccgcgctc aagcccttcc tctatgcgct cgccttcgat cgcggaacca
     1681 cgccggcaac ggtcctcccg gacatcgcgc gggtatacca gaccggcacc gggccctacc
     1741 ggccgcgcaa ctacgaccgg cgcttccacg ggcccgtgcg aacccgggaa gcgctcgcca
     1801 gctcgtacaa tgtccccgcg gtggagctgg ccagccggct cggcgccggc agcctgctcc
     1861 acgtgctccg cggcgcgggc ttcgcttccc tcggacgaag cgcggatcac tacggccccg
     1921 gtctcgcgct gggcaacggc gacgtcaccc tgctggagct ggccaatggt taccgcggtc
     1981 tcgccaatct tggtgtctgg cgaccgtacg cctggcgtgc cgcttcgccg ggtgccccgc
     2041 cccagccggg ccggcgcttc gcgtcgcccc gctcggcggc gctggtgctc gacattctcg
     2101 ccgatccggt cgcgcggatt ccgggtttcg gcctcgagag cacgctcgat ttcccctt
//
LOCUS       DASUYN010000110         5604 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_695869, whole genome shotgun sequence.
ACCESSION   DASUYN010000110 DASUYN010000000
VERSION     DASUYN010000110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5604)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5604)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5604
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_695869"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            114..860
                     /locus_tag="VF061_02085"
     CDS             114..860
                     /locus_tag="VF061_02085"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX6668316.1"
                     /translation="MREFADHFSRLSARYAAYRPRYPEALFDAIAAASARRDQVWDCA
                     TGTGQAAVPLAARFEAVLATDASRQQVRAAAPHERVRYLVALAEAAPVRDRSAGLVTV
                     AQALHWLDLPRFYAEVRRVIRPGGLLVAWTYGVQRVDGGAIDAAIDEFYGRVVGPYWA
                     PERRLVETGYRTLDFPFEEVAIPSPPMTEHWGLVELLGYVSTWSAVARCREVTGRDPL
                     ADLEARLAPLWGEPAERRRVEWKIVVRAGR"
     gene            874..1383
                     /locus_tag="VF061_02090"
     CDS             874..1383
                     /locus_tag="VF061_02090"
                     /inference="COORDINATES: protein motif:HMM:NF016840.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF664 domain-containing protein"
                     /protein_id="HEX6668317.1"
                     /translation="MLVPAVAAILDRDLQVLAREVMAYPDERALWATPPGITNSAGTL
                     ALHLAGNIRYYLGARLGGVPYVRDRPAEFAARDVPRATILGHIEAARAAVRAAAAGTG
                     DGRLEEDFPEVVGGVRVATGEYLIHLVSHFAYHLGQLDYHRRMVTGNARGVDAVRAAE
                     LSTARPVAD"
     gene            1409..1933
                     /gene="lspA"
                     /locus_tag="VF061_02095"
     CDS             1409..1933
                     /gene="lspA"
                     /locus_tag="VF061_02095"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: protein motif:HMM:TIGR00077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HEX6668318.1"
                     /translation="MALTPKARRFWPLFFLVLLTDCATKRAAETHLVPAHVPHEFLGE
                     LVRLTLAYNPGAAMSISLGQHSRLGFSLLALAALIVLAHVYQRTSPSDRLAAAGLALI
                     ASGALGNLLDRLRSPRGVVDFIDVGVGDVRFWTFNIADVGITCGAVLLVLALHRVEER
                     DAGAPVASADGDVT"
     gene            complement(1910..2881)
                     /locus_tag="VF061_02100"
     CDS             complement(1910..2881)
                     /locus_tag="VF061_02100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668319.1"
                     /translation="MRHTLTLLALVLAACGGDTAGPEDPTPAPAGPLATIGGCQIFPA
                     DNAWNRDVSADPVHPNSTALLAEMVPESSLHLDLGTTEEYWGIPYTVVPADQPLVPIT
                     FGTGGADYSDESDPGPMPIPLDVHIEGGSGDEPDPASGDRHVLVVRQGDCTLFELFNT
                     ERTGDGFRVSSSAVWDLTTNHTRPPGWTSADAAGLPILPGLLKYEEVAGDRLHHALRF
                     TVPQVRRAYTAPASHCGQHDDPALPPYGTRVRLKASFPLDDYTGDALVILTAMKRYGL
                     ILADQGSAWYVTGTAHPGWVDALDQLRAFRVRGSDFEVLASGDVTVC"
     gene            3110..3553
                     /locus_tag="VF061_02105"
     CDS             3110..3553
                     /locus_tag="VF061_02105"
                     /inference="COORDINATES: protein motif:HMM:NF024865.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX6668320.1"
                     /translation="MIGPSTSGALALLTLLYTGGVAAQGPNATEQEIRKLLDESAVSW
                     NRGDLDGHLADNADSISFMTGKGPIVGKHRTAEALRRSFFRDGKPVQQLRFEQVTIRR
                     LGDGFALVVGRFVLEGGGEPERSGWFSTVWERQTAGWRVIHDHSS"
     gene            3573..4145
                     /locus_tag="VF061_02110"
     CDS             3573..4145
                     /locus_tag="VF061_02110"
                     /inference="COORDINATES: protein motif:HMM:NF025793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0019239 - deaminase activity [Evidence
                     IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside deaminase"
                     /protein_id="HEX6668321.1"
                     /translation="MTPPSRLVIPAPEWLDECVDWSARYESDEERMRVAVELARQNVV
                     RGTGGPFGAGVFEAGGGRLVAAGVNSVTRLGNSVLHAETLAIMLAQARLGTYALGAGG
                     GESYLLVTSCEPCAMCLGATLWSGVRALICGATREDATAVGFDEGPVFAESWSYLEQR
                     GVRIARGVLRGEAAAVLELYRATGGPIYSS"
     gene            4228..4431
                     /locus_tag="VF061_02115"
     CDS             4228..4431
                     /locus_tag="VF061_02115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668322.1"
                     /translation="MRNLFLLLAVLGLVGIALGVLSVIRGAAGPHGVPFSYENYGGPG
                     SVIAGLMLVAGSLYLRSVWRERR"
     gene            4459..4857
                     /locus_tag="VF061_02120"
     CDS             4459..4857
                     /locus_tag="VF061_02120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668323.1"
                     /translation="MPLLERLVEALRQLRSHHRRRLAFLNPPIERRRPRIQMEDYAAR
                     HSIDHTLDRKAELRRLAPSRPEAAARYHQLLTYELEGLRELVATLQTTAGGRDVHECL
                     AESRAEIERLEIEVAWCASLQNPEPIADAR"
     gene            4953..>5604
                     /locus_tag="VF061_02125"
     CDS             4953..>5604
                     /locus_tag="VF061_02125"
                     /inference="COORDINATES: protein motif:HMM:NF023324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="maltotransferase domain-containing protein"
                     /protein_id="HEX6668324.1"
                     /translation="MEPGRAVERDPDRTLPHLVVSNIAPAVVGGRYAVKRQVGDGLRV
                     GADIFTDGHDLLAARVLYLTPGERRPSSVPMAYSFDDDRWYATLTLDRVGEWRFWVEG
                     WIDRFATWRSELEKKVGAGQDVASELLEGADQVREAEPHARGEDHHRLAEFASLLADT
                     NAERGARVGAALAPELQALMAAYGQPHGVTRSDRDYRVRADRREAGFAAWYEFFPRS"
BASE COUNT          731 a         1934 c         2090 g          849 t
ORIGIN      
        1 ggtcgcggag gacgtggtgt acgcctgggt ggagatctac gaaaagcccg aggaccgctg
       61 ggtgctgatg gcggtggcgt ccaccgatcg ccccggcccc tagcagggtg acggtgcgcg
      121 agttcgccga tcacttctcc cggctctcgg cgcgttacgc ggcctatcgg ccgcgctatc
      181 cggaggcgct gttcgacgcg atcgcggcgg cgagcgcgcg acgcgaccag gtgtgggact
      241 gcgccaccgg gaccggccag gccgcggtcc cactggcggc ccgtttcgag gcggtgctgg
      301 ccaccgacgc cagccggcag caggtgcgcg ccgcggctcc gcacgagcgg gttcgctacc
      361 tcgtcgcgct ggcggaggcg gcgccggtcc gcgaccggtc cgcgggcctg gtgaccgtgg
      421 cccaggcgct ccattggctg gacctgcccc ggttctatgc ggaagtccgc cgtgtgatcc
      481 ggccgggcgg actgctcgtg gcctggacct acggggtgca gcgggtggac gggggagcga
      541 tcgatgccgc gatcgacgag ttctacggcc gggtcgtcgg gccctactgg gcaccggaac
      601 gccgtctggt ggagaccggg taccggaccc tcgactttcc cttcgaggag gtcgccatcc
      661 cgtccccgcc catgaccgag cactggggcc tggtcgagct gctcggctac gtctcgactt
      721 ggtcggccgt ggcgcggtgc agggaagtga ccggccgcga cccgctggcg gacctcgaag
      781 cgcgactcgc gcccttgtgg ggcgagcctg cggagcgacg tcgggtcgaa tggaagatcg
      841 tggtgcgcgc cggccgatga ggaggagacc gagatgctcg taccagcggt agcggcgatc
      901 ctggatcgcg atctccaggt cctggcgcgc gaggtgatgg cgtatccgga cgagcgcgcg
      961 ctgtgggcga ccccgccggg gatcaccaac tccgccggta cgctcgcgct ccatctggcg
     1021 gggaacatcc ggtactacct gggggcgagg ctgggaggcg tgccgtacgt ccgcgaccga
     1081 ccggcagagt tcgcggcgcg agacgtgcca cgggcgacga tcctcggcca catcgaggcg
     1141 gcccgtgcgg ccgtgcgcgc ggccgcggcg ggcacgggcg acggccgtct ggaggaggac
     1201 ttccccgagg tggtcggcgg cgtgcgggtg gcgaccgggg agtacctgat ccacctggtg
     1261 tcgcacttcg cctaccacct cggccagctg gactaccacc gccggatggt caccgggaac
     1321 gcccgagggg tggatgcggt gcgggcggcg gagctgagca ccgcgcgacc ggtcgcggac
     1381 tgagccgggg gcccttacca ttcccgccat ggcgttgacc ccgaaggccc gccgcttctg
     1441 gccgctcttc ttcctcgtcc tcctcaccga ctgcgctacc aagcgcgcgg ccgagaccca
     1501 tctcgtgccc gcccatgtgc cccacgagtt cctgggcgag ctggtgcggc tcactctcgc
     1561 ctacaacccg ggcgcggcga tgagcatctc gctcggtcag cattcgcgcc tcggcttctc
     1621 cctcctcgcc ctggccgcgc tcatcgtcct ggcgcacgtg taccagcgga cttcgccgag
     1681 cgaccgactg gcggccgcgg ggctcgcgct catcgcgagc ggggcgctgg gaaacctgct
     1741 cgaccgcctc cggtcgccgc ggggcgtggt ggacttcatc gatgtgggcg tcggcgacgt
     1801 acgcttctgg accttcaaca tcgccgacgt cggcatcacc tgcggtgccg tgctgctggt
     1861 cctcgccctc catcgggtcg aagagcggga cgccggggca ccggtggcct cagcagacgg
     1921 tgacgtcacc tgaggccagc acctcgaagt cgctcccccg caccctgaac gcccgcagct
     1981 gatcgagcgc gtccacccac cccgggtgcg cggtgcccgt cacgtaccag gcgctgccct
     2041 ggtcggccag gatcaatccg taccgcttca tcgccgtcag gatgacgagc gcgtcaccgg
     2101 tgtagtcgtc cagcgggaag ctcgccttga gccgcacccg ggtgccgtag ggcggaagcg
     2161 ccggatcgtc gtgctgtccg cagtggctcg cgggcgcggt gtaggcccgg cggacctgag
     2221 ggacggtgaa gcggagcgcg tggtgcagtc tgtcgcccgc cacctcctcg tacttgagga
     2281 gaccgggcag aatgggaagc cctgccgcgt cggccgaggt ccagccgggc gggcgggtgt
     2341 ggttggtggt caggtcccac acggcggagg agctcacccg gaatccgtcg ccggtgcgct
     2401 cggtgttgaa gagctcgaac agcgtgcagt cgccctggcg gacgaccagg acgtggcggt
     2461 cacccgaggc gggatcgggc tcgtcgccgc tgccgccttc gatgtgcacg tcgagcggga
     2521 tcggcatcgg ccccgggtcg ctctcatcgg agtagtcggc gccgccggtg ccgaaggtga
     2581 tgggcaccag gggctggtcc gcgggaacga cggtgtaggg aatgccccag tactcctcgg
     2641 tcgtgcccag gtcgagatgg agcgagctct ccggcaccat ctccgccagc agcgccgtgg
     2701 agttggggtg gaccgggtcg gcgctcacgt cgcggttcca cgcattgtcg gcggggaaga
     2761 tctggcagcc gccgatcgtc gccaggggac cggccggggc cggggtcgga tcctcgggcc
     2821 cggcggtgtc gccgccgcag gctgcaagga ccaacgcgag gagggtcagc gtgtgccgca
     2881 tgtgagtctc gcgggagcgg gatggcgccc ccgggggcaa gatccatgcg ctcgccgccg
     2941 gggctgcctg catcaggctg cacgtccggt ggcgcggggc cggacgcgcg cctaccatcc
     3001 gggcatgaac cagtccttgc gcgtcacgtg cctcgatgaa tccgggccga ccgtcacggc
     3061 gtagggcgcg gacatcctca cacccgtgtc cactccaggg aggcgcatga tgatcgggcc
     3121 gagtacgtcc ggggcgctgg cgctgctgac actgctgtac accggcgggg tcgcggcgca
     3181 gggccccaac gccaccgagc aggagatccg gaagctgctg gatgagtccg cggtctcctg
     3241 gaaccggggc gatctcgacg gccacctcgc cgacaacgcc gattccatct ccttcatgac
     3301 cggcaagggc ccgatcgtcg gcaagcaccg cacggccgag gcgctgcgcc gcagcttctt
     3361 ccgcgacggc aagccggtcc agcagctgcg cttcgagcaa gtgacgatcc gccgcctggg
     3421 cgacggcttc gcgctggtgg tcggccggtt cgtgctggaa ggcggaggcg agccggagcg
     3481 cagcggctgg ttctcgacgg tgtgggagcg gcagacggcg ggctggcggg tcatccacga
     3541 ccattccagc tgacccacgc gccgccgcca tcgtgacgcc tccttcccgg ctggtgatcc
     3601 ccgcgcccga gtggctcgac gagtgcgtgg actggagtgc ccgctacgag tcggacgagg
     3661 agcgcatgcg ggtcgcggtg gagctggcgc ggcagaacgt ggtccggggc accggcggcc
     3721 ccttcggggc cggcgtgttc gaggcgggcg ggggacggct ggtggcggcg ggggtcaaca
     3781 gcgtgacccg gctgggcaac tccgtgctcc acgcggagac cctggccatc atgctggcgc
     3841 aggcccggct cggcacctac gctctgggcg ccggcggcgg cgagtcgtac ctgctggtga
     3901 cgtcgtgcga gccgtgcgcg atgtgtctcg gcgccaccct ctggagcggg gtgcgcgccc
     3961 tgatctgcgg cgccacccgg gaggacgcca ccgccgtcgg cttcgacgag ggaccggtgt
     4021 tcgccgagag ctggtcctac ctcgagcaac gtggggtgcg catcgctcgc ggtgtcctgc
     4081 gcggagaggc cgcggccgtg ctggagctgt atcgcgccac cggaggtccg atctacagct
     4141 cctgagccgc tcgggtgagg ccccttgccc cgcggccggg gccgcagttt catctatacc
     4201 ggcgttccgc ccacctcggg agctttcatg cgcaatctct tcctcctcct cgccgttctc
     4261 ggcctcgtcg gcatcgccct gggcgtgctg agcgtgatcc gcggtgcggc gggaccccac
     4321 ggtgtcccgt tctcgtacga gaactacggc ggccccggct cggtgatcgc cggactgatg
     4381 ctcgtggcgg gatcgctgta cctgcgctcg gtctggcggg agcgccgcta gcccgggttc
     4441 cccggggagg gttcggacgt gccgttgctc gagcgcctgg tcgaagccct gcgccagctc
     4501 cgaagccacc accgccggcg cctggccttc ctcaatccac ccatcgagcg ccgccggccg
     4561 cgaatccaga tggaggatta cgcggcgcgg cactcgatcg atcacacgct cgaccgcaag
     4621 gccgagctgc gccgcctggc gccgtcccgt cccgaggcgg ccgcccgcta ccaccagctg
     4681 ctgacctacg agctcgaggg actgcgggag ctggtcgcca ccctccagac caccgccggc
     4741 ggccgcgacg tccacgagtg tctggccgaa agccgcgcgg agatcgagcg gttggagatc
     4801 gaggtggcgt ggtgcgcctc gctgcagaac ccggagccga tcgccgacgc ccggtgaggc
     4861 gcgagctccg gcggatcgct gcgccggtga ccgacgtcac gcggtgcggt cgggggtagt
     4921 ggcgcgcatc ggatcgcttt acgttgcggt ccatggaacc gggacgtgcg gtcgaacgcg
     4981 atccggaccg tacgctaccc catctggtcg tcagcaacat cgctccggcc gtggtgggcg
     5041 gacggtacgc ggtgaagcga caggtgggcg acggcctgcg cgtcggcgcc gacattttca
     5101 ccgacgggca cgatctcctc gccgcgcggg tgctgtacct cacacctggt gagcgccggc
     5161 cgtcgtccgt gccgatggcc tattccttcg atgacgatcg ctggtacgcc acgctgaccc
     5221 tggatcgggt cggcgagtgg cggttctggg tcgaagggtg gatcgaccgc ttcgccacct
     5281 ggcggagcga gctggagaag aaggtgggcg cgggccagga cgtcgcgtcg gagctgctcg
     5341 agggcgccga ccaggtgcgc gaggccgagc cgcacgcgcg gggcgaggac caccaccgcc
     5401 tggcggagtt cgcctccctg ctggccgaca cgaatgccga gcggggggcc cgcgtcggcg
     5461 ccgcgctggc gccggagctg caggctctga tggccgccta tgggcagccc catggggtca
     5521 cccgctccga tcgcgactac cgggttcgcg ccgaccggcg cgaggcgggc ttcgccgcct
     5581 ggtacgagtt ctttccccgt tcgg
//
LOCUS       DASUYN010000111         2494 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1137661, whole genome shotgun sequence.
ACCESSION   DASUYN010000111 DASUYN010000000
VERSION     DASUYN010000111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2494)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2494)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2494
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1137661"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..357)
                     /locus_tag="VF061_02130"
     CDS             complement(<1..357)
                     /locus_tag="VF061_02130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668325.1"
                     /translation="MSTRPFIALVLAALLLRPMAVAAAQDTTAAAPVPQDTGVQGYAP
                     AEAAPAPEAAPAPAPAAAPAPAAAAPAAAPVAGPAPGSRAAALSTLGFVEILSPRPTD
                     RIRREIEEAKMDRREAE"
     gene            complement(456..1022)
                     /locus_tag="VF061_02135"
     CDS             complement(456..1022)
                     /locus_tag="VF061_02135"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase"
                     /protein_id="HEX6668326.1"
                     /translation="MDAIDAIQRRTSVRRYRSEPVSRETIERLLECAVRAPNHKLTEP
                     WRFAVLTGGGKARLAEIRAQHRLKGYDDPTSEEARARSEKARRDTLESPAIIVVMART
                     SADDITNEEDYAAVMMATANLMTAAQSLGLGTYLKTGGVMRSPALAELVGLPGGYRIV
                     GVLSVGYPVESEAPRRRRPAGELTSWIE"
     gene            complement(1032..1571)
                     /locus_tag="VF061_02140"
     CDS             complement(1032..1571)
                     /locus_tag="VF061_02140"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HEX6668327.1"
                     /translation="MIALGLGRLAGVSPFERLRLDAAGVGAGLLATLPMVVLLFWCVR
                     TRWGPMRTLVALVEERLGPYLAGAPIGGIVVLAALAGIGEELLFRGVIQVWLAERLPL
                     WLAVACASLLFGVGHWLSASYALLAAVIGAYLGVLFLLTGDLLAPIVAHAGYDVVALV
                     VLARRASAGEPDPAGGAQG"
     gene            complement(1675..2232)
                     /gene="efp"
                     /locus_tag="VF061_02145"
     CDS             complement(1675..2232)
                     /gene="efp"
                     /locus_tag="VF061_02145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HEX6668328.1"
                     /translation="MKASDIRRGHVIMVDGQPCRVMDFQHRTPGNLRAFVQVRFRNLN
                     SGNTFDTRLSATEFVEDARLDTKELQVLYRDANGVHVMDASSYEQYTLDAETIGDQAE
                     WLEPGLTFQAEWLGGRPIAIQLPAVAELEVVETAPIMKTATKTASTKPAKLSNGVTIQ
                     VPEFIGEGERVRVNPREGVYLERAK"
BASE COUNT          364 a          888 c          888 g          354 t
ORIGIN      
        1 ctcggcctcg cgtcggtcca tcttggcctc ttcaatttcc cgccgaatcc ggtcagtcgg
       61 acgggggctc agaatctcga cgaagcccag ggtgctgagt gccgccgcgc ggctcccggg
      121 ggcgggacca gcaacgggag ccgctgccgg agcggcagcc gccggagcgg gggccgcggc
      181 aggagcgggc gctggggccg cctcgggggc gggtgccgcc tcggcgggtg catagccttg
      241 cacgccagtg tcttggggga ccggcgccgc cgccgtggtg tcctgggcgg ctgcgaccgc
      301 catcggacgc agcagcaggg cggcgaggac cagggcgatg aacggacggg tcgacacggc
      361 tgttctcctt gccagagtaa agggcggccc aaggtgccgc cgacaacgga tggccaacat
      421 accgcgaaat ccccgggttg gtaacacccg gccggctact cgatccaact ggtcagctcc
      481 ccggcgggac gccgccggcg gggggcctcg gactcgaccg gataccctac cgacagcacg
      541 ccgacaatcc ggtagccccc tggcagcccg accagctcgg ccagggcggg gctccgcatg
      601 acgcccccgg tcttgaggta ggttcccagc cccagggact gggccgccgt catgagattg
      661 gccgtcgcca tcatcacggc cgcgtaatcc tcttcgttgg tgatgtcgtc ggcgctggtg
      721 cgggccatga ccacgatgat cgccggagac tccagggtgt cccgccgggc cttctcggac
      781 cgggcccgcg cctcctccga ggtggggtcg tcgtacccct tgagccggtg ctgcgccctg
      841 atctcggcca gccgtgcctt gcccccgccg gtcaggaccg cgaagcgcca gggctcggtc
      901 agcttgtggt tcggggcgcg cacggcgcac tccagcagcc gctcgatcgt ctcccgggag
      961 acgggctcgg agcggtagcg gcgcacggag gtccgccgct ggatcgcgtc gatggcatcc
     1021 atggaggaaa tctagccctg agccccgccg gccgggtcgg gctccccggc cgatgcacgc
     1081 cgggccagaa ccaccagcgc cacgacatcg tagcccgcgt gggcgacgat gggggcgagg
     1141 aggtcgccgg tcagcaggaa cagcacgccc aggtaggccc cgatcaccgc ggcgaggagc
     1201 gcgtacgagg ccgagagcca gtggccgacc ccgaagagca gactcgcgca ggccacggcg
     1261 agccagagcg gcaagcgctc cgccagccat acctggatca cgccccggaa caacagctcc
     1321 tcgccgatgc cggccagcgc cgcgagcacg acgatgccgc cgatcggggc gccggccaga
     1381 tagggcccca gccgctcctc gaccagcgcg accagggtcc gcatcggacc ccatctcgtg
     1441 cgcacgcacc agaagagcag caccaccatc gggagcgtgg cgagcaggcc cgcgcccacg
     1501 cccgcggcgt cgagtctgag ccgctcgaag ggtgacacgc cggccagccg gccgaggccg
     1561 agcgcgatca cgaggagcgc gccctccgag accacgcccg cggtgagcag ccgggagaac
     1621 gacggcgccg ggctgccgtc tgttgtcagc ggtgatcctt ccggtgaggt gcgcctactt
     1681 ggcgcgctcc aggtagacgc cctcgcgggg attgacccga acccgctccc cttccccgat
     1741 gaactcgggc acctggatgg tgacgccgtt gctgagcttg gcgggcttgg tgctggcggt
     1801 cttcgtcgcc gtcttcatga tcggcgccgt ctccaccacc tccagctcgg ccaccgcggg
     1861 cagctggatc gcgatcgggc ggccgcccag ccattcggcc tggaaggtga ggccgggctc
     1921 gagccactcg gcctggtcgc cgatcgtctc cgcgtccagg gtgtactgct cgtaggagct
     1981 cgcgtccatc acgtgcacgc cgttggcgtc gcggtagagc acctgcagct ccttggtgtc
     2041 gagccgggcg tcctccacga actcggtggc gctgagtctg gtatcgaagg tgttgccgga
     2101 gttcaggttg cggaaacgca cctgaacgaa ggcacggagg tttccggggg tccggtgctg
     2161 gaagtccatc acccggcacg gctgcccatc caccatgatc acgtgtccgc gccggatatc
     2221 gctagccttc atcggtctcg ccgctcctcg tggtcgtccc tagcgccgcg ggcagggtgc
     2281 cccggagccg gtggaagata ccgccccccg tgacaacagt cactgtcgcc tcctccggcc
     2341 ttcatctacg ttgccggagc gtggcagcgc tcagcgaggg actcgaggcc cggctcgcgg
     2401 gctggcgtcg gaacgtgggc gagcccgtct cgctggacct cgcgtgggcg gaggacgtcg
     2461 ggcatacccc cgcgtcacgg ctcgcggtgg tgag
//
LOCUS       DASUYN010000112         2968 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_477820, whole genome shotgun sequence.
ACCESSION   DASUYN010000112 DASUYN010000000
VERSION     DASUYN010000112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2968)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2968)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2968
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_477820"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..361)
                     /locus_tag="VF061_02150"
     CDS             complement(<1..361)
                     /locus_tag="VF061_02150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668329.1"
                     /translation="MSRSPDLERKLDVLMSLAAEDREGLPPRLRHARSTGALDPINIR
                     HLRPLPGMRMSLLRILMTNACSYNCHYCPMRRDRNMPRTLLKPEELVRIFLGARARGW
                     CEGLFVTTGIPGRAVKVM"
     gene            413..1522
                     /locus_tag="VF061_02155"
     CDS             413..1522
                     /locus_tag="VF061_02155"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX6668330.1"
                     /translation="MPSDFLPLAGLQVLDLTRVLAGPLCTMMLGDLGARVLKVERPGL
                     GDETRAWGPPFDGEGESAYFLAVNRNKLSVALDLDLESDRVVLLALAREADVVVENFR
                     PGTLERRGLGPAEMLAVSPRLIWCRLTGFGGESGRPGYDVVVQAEAGWMAITGEPEGP
                     PMKIGVALADVCAGKDAAIAILAGLAARSAAEPADRMLTISLAHSATAALVNVAQNAL
                     VTGQEPARWGNAHPNLVPYQLFEAADRPFIVAVGNDTQWLGCCRALERPDLAADRRFL
                     RNAGRVEHRTELVRTLAETLRTRPAAEWLERLERHGVPAGIVRRVSEALADVRADAKT
                     GIAPLAPGSVRLPPPRLDQHGPLVRDLGWGAFDAL"
     gene            complement(1517..2446)
                     /locus_tag="VF061_02160"
     CDS             complement(1517..2446)
                     /locus_tag="VF061_02160"
                     /inference="COORDINATES: protein motif:HMM:NF025598.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4340 domain-containing protein"
                     /protein_id="HEX6668331.1"
                     /translation="MSPKQLARLAMILGALLLLWGAASLARRGSRGPTESDRFALPAM
                     PRDSVDSIVVMRAADTARLARVDSATWTVNGHRASLGAVQDILAALGDTARRTELVGG
                     RSGSHAGFGVDSAKGARIRVVRGDSTVADLVQGNRGPGLDGGYFRFASDSAVYLVGGN
                     LAQALEQTSDELRDKRIAGVTADSVARIEITRGRRSYAVRRDGAVWTLTPGGGADSAA
                     VAELLSSYGTVEAAGFATPAQADSARFTRPDRRVALLRADGSPLLSLALDSTATGFWV
                     RAGDDPTVYRLDTWSADRLTPSDSTLKAKPAAS"
     gene            complement(2443..>2968)
                     /locus_tag="VF061_02165"
     CDS             complement(2443..>2968)
                     /locus_tag="VF061_02165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668332.1"
                     /translation="LTWASTIDTAGAAKGTLTPLLGSSQATGTFTNMTTINPTQDFPQ
                     ADLKHRLLAVQVNPQPSAEGGKARGRVVVVGSLDFATDRFVRTAPENLAFSLNAVDWL
                     AQDEELIAIRSKDRRPPPLLFESPALREGVKYANVAGLPLLVGVLGIIRLIRRRRRTR
                     EPYRPLVPVEGSAA"
BASE COUNT          402 a         1023 c         1112 g          431 t
ORIGIN      
        1 ccatcacctt gaccgcccgt ccgggaatgc cggtggtgac gaacagcccc tcgcaccatc
       61 cgcgggcccg cgcccccagg aagatccgca ccagctcttc cggcttgagg agcgtgcgcg
      121 gcatgttgcg gtctcggcgc atggggcaat agtggcagtt gtagctgcag gcattggtca
      181 tgaggatgcg gagcagggac atccgcatgc cgggcagcgg gcgcaggtgc cggatgttga
      241 tgggatcgag ggcgccggta ctgcgggcgt ggcgcagccg cggcggcagg ccttcccgat
      301 cttcggccgc gagtgacatc aggacgtcga gcttgcgttc cagatcggga ctccgcgaca
      361 ttggctcctc ctcgctcccg cacactaccc gaacaaatcc cgaagcgcaa gggtgccgtc
      421 agacttcctt cctctcgccg gtctccaggt gctggatctc acccgcgtcc tcgcggggcc
      481 gctctgcacc atgatgctgg gagacctcgg ggcgcgggtg ctcaaggtcg agcgccccgg
      541 actgggcgac gagacccgcg catggggacc gcccttcgat ggcgaaggtg agagcgctta
      601 cttcctcgcg gtcaaccgca acaagctgag tgtcgcgctg gatctggatc tcgagtctga
      661 ccgcgtggtc cttctcgccc tggcgaggga ggccgacgtg gtggtggaga attttcggcc
      721 cgggacgctg gagcggagag gcctggggcc cgcggagatg ctggcggtct cacctcgcct
      781 gatctggtgc cggctgaccg gattcggcgg ggagagcggc cggccgggct acgatgtcgt
      841 ggtgcaggcg gaggcgggct ggatggcgat cacgggcgag ccggaggggc cgccgatgaa
      901 gatcggagtc gcgctggcgg acgtctgcgc cggcaaggat gcggccatcg cgatcctggc
      961 cggtctcgct gcacggtcgg cggcggagcc cgcggaccgg atgctcacca tctccctcgc
     1021 ccacagcgcc accgcggcgc tggtcaacgt cgcccagaac gcgctggtga ccggccagga
     1081 gcccgcgcgg tgggggaacg cgcatccgaa tctggttccc taccagctgt tcgaggccgc
     1141 cgaccgtccc ttcatcgtgg cggtggggaa cgacacccag tggctcggct gctgtcgggc
     1201 gctggagcgg ccggacctcg cggccgatcg gcgattcctc cgcaacgccg gtagggtgga
     1261 gcaccgaacg gagctggtgc gcaccctggc ggagacgctg cgcactcggc ccgcggccga
     1321 gtggctcgag cgcctggagc gtcacggggt tcctgcgggt atcgtgcggc gggtgtcgga
     1381 agccttggcg gacgtgcggg cggacgcgaa gaccggcatc gccccgctcg ccccggggtc
     1441 cgtgcggctc ccgccgccgc ggctggacca gcacggcccc ctcgtgcgcg acctgggctg
     1501 gggcgcgttc gacgcgctat gaggcggcgg gcttggcctt gagcgtgctg tcgctcgggg
     1561 tgagtcggtc cgccgaccag gtgtccagtc ggtagaccgt agggtcgtcc cccgcccgca
     1621 cccagaagcc cgtggctgtc gaatccaggg ccagggacag gagtggagag ccgtccgcgc
     1681 gcagcagcgc cacccggcgg tccggtcggg tgaagcgtgc cgagtccgcc tgcgccggcg
     1741 tggcgaaacc cgccgcctcg accgtaccgt agctggacag cagctccgcg acggcggcgc
     1801 tgtccgcgcc gccgcccggc gtgagggtcc agacggcacc gtcgcggcgg accgcgtagg
     1861 agcgtcgccc gcgagtgatt tcgatccggg ccacgctgtc ggccgtcacc cccgcgatcc
     1921 gcttgtcgcg cagctcgtcc gacgtctgct ccagggcctg cgccaggttg ccgcccacca
     1981 ggtacaccgc ggagtcgctc gcgaaacgga aatagccgcc gtcgagtccg ggcccgcggt
     2041 tgccctgcac cagatcggca accgtggaat caccccgcac gacgcggatc cgggcgccct
     2101 tggcgctgtc cacgccgaag ccggcgtgcg agcccgagcg gcccccgacc agctcggtgc
     2161 gccgggcggt gtcgcccagc gcggccagga tgtcctgcac cgcgccgagg gaggcgcggt
     2221 gcccgttcac ggtccaggtg gcggagtcca cccgcgccag ccgcgcggta tcggccgccc
     2281 gcatgacgac gatcgagtcg accgaatcgc ggggcatggc cggcaaggcg aaccggtcgg
     2341 actcggtcgg tccgcgagag ccgcggcggg ccagcgacgc ggcgccccag aggaggagca
     2401 gggctcccag gatcatggcg agtcgggcga gctgtttcgg gctcatgccg cgctcccttc
     2461 caccgggacc aggggccggt agggctcacg ggtccggcgt cggcggcgga tcaggcggat
     2521 gatgcccagc acgccgacca ggagcggcag tccggccacg ttggcgtact tcacgccttc
     2581 gcgcagcgcc gggctctcga acaggagcgg cggcgggcgc cggtccttgg agcggatggc
     2641 gatcagctcc tcgtcctggg ccagccagtc caccgcgttg agcgagaacg ccaggttctc
     2701 cggcgccgtg cgcacgaagc ggtcggtcgc gaagtcgagg ctccccacca ccacgacgcg
     2761 gccgcgggcc ttgcccccct cggcggaggg ctgggggttc acctgtaccg ccagcaaccg
     2821 gtgcttcagg tcggcctgcg ggaaatcctg ggtcgggttg atggtcgtca tgttggtgaa
     2881 cgtgccggtc gcctggctgc tgccgagcag cggcgtgagc gtgcccttgg ctgcccccgc
     2941 ggtgtcgatg gtgctggccc aggtgagc
//
LOCUS       DASUYN010000113         2941 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_478189, whole genome shotgun sequence.
ACCESSION   DASUYN010000113 DASUYN010000000
VERSION     DASUYN010000113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2941)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2941)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2941
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_478189"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..300)
                     /locus_tag="VF061_02170"
     CDS             complement(<1..300)
                     /locus_tag="VF061_02170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011437271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6444 domain-containing protein"
                     /protein_id="HEX6668333.1"
                     /translation="MEALRAANARLEAELAAEREARRVLELRLAELERRLGMHSGNSS
                     TPPSKESLAAKAKRTAARRASQRERSKDKKPGGQRGHVGRGLAPAAEPDRTEEADP"
     gene            963..1451
                     /locus_tag="VF061_02175"
                     /pseudo
     CDS             963..1451
                     /locus_tag="VF061_02175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004179377.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase domain-containing protein"
     gene            complement(1476..>2941)
                     /locus_tag="VF061_02180"
     CDS             complement(1476..>2941)
                     /locus_tag="VF061_02180"
                     /inference="COORDINATES: protein motif:HMM:NF019149.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX6668334.1"
                     /translation="PAYAGAYVYGRTRKHSHVGEDGTVRTRRKPVPREEWEVLIRGHH
                     EGYIDWDAYEANLAKIGKNIRPEAHRPGTGAVREGCALLQGLATCGTCGRKLTVFYQG
                     PAKATPGYYCQGPATIVDGRGTRHLHIGGVALDAAVSDAFLAALAPAALTACLTAAEH
                     LENAHDTALAQHRRHVERARYDAGRAERRYQAVDPDNRLVARGLEAAWEKALTELAAT
                     EAELARREQARPRALTDTEHADILALGDNLGQVWDAPTTTDRDRKLLLRTLIDEVKVT
                     VVRDDDAGHTDLLIRWKGGALTELTVPGRRRQPTIRTDEDTVDLIRRLAVHYTDDKAA
                     GILNRQGRRTARGLTFTATRVASLRQHWNIPGHSPGRPKAPDGELLTIAEAARELGVA
                     ASTLHRWINDGFVAGEQDTPGAPWRIRMTDELRNLFVDDAPDGWLAMLEATLALGVSR
                     QTVLQRVKRGELKAVHVRTGRRKGLRIQVPPPTDPLF"
BASE COUNT          390 a          939 c         1176 g          436 t
ORIGIN      
        1 cgggtcggcc tcctcggtgc ggtccggctc ggccgccggg gcgagccccc ggcccacgtg
       61 cccccgctgc ccgccgggct ttttgtcttt cgaccgctcc cgctgcgagg cccgccgggc
      121 cgccgtccgc ttcgccttcg cagccaggga ctccttcgac ggcggcgtcg aggaattccc
      181 gctgtgcatc cccaggcgcc gttccaactc ggccagccgc agctcgagca cccgccgggc
      241 ctcccgctcg gccgccaact ccgcctcgag ccgcgcgttg gcggcgcgca gcgcctccac
      301 atccgcaggc ggcggcgagg aggcgtcgga cacaaaccac gatcattgcc agaaacggcc
      361 ggaactcaag caactgggcc gctgtgtctc ctcaacgcat cccaacgggc cagcggcccc
      421 ctgaatggac agagcgccgg gataaaccgg catggagaag gagatgagag agctctacac
      481 cgaaggagta gcgacccacg gtgaccccga gtcatgcgtc ggcgcccgtg agggcggcgg
      541 cgaagcgttg gcaggggcac gtgcaggccg ggctatggag ccgcgaaatc aaggcgatcg
      601 gggtgccgac gtcgttgtcc aggcggaagg caacatctcc ggcggcgcta cgcgcgagtc
      661 gccgggggac cccgcgcggt cggagaaccc gtgcatgtac ggaatctcca tgcgcgagat
      721 ccgggaggtc ccacgcccgc ccgcccgggt gatgtccggg tgggccgctc ggggaacgcc
      781 gaggcggtac gcctgagatg gacggacgtg ggaagtcgga catgcccgta gtacctacga
      841 gcccgccgaa caaggccgca ctcgcggctg cggaggtggg ggagggaagg ggcgtggcca
      901 aggggaacac ggccggcgcg gcacaccccg gacgcagagc cgggcaaggt gtgtaccccg
      961 cgttggaccg tgtgcgccaa gcggcgcgga aagacaaggg aacacggttc acggcgctgc
     1021 tgcaccacgt cgacatcgat cgcctgcggg cggcctaccg ggcgatccgc ccggacgccg
     1081 cgccgggggt ggacggggtg acgtgggtgg cctacgggca ggagttggag gccaacctcc
     1141 gcgacctgca cacgaggctg cacacagggc gctaccaggc gagcccgacc cgcagggcgt
     1201 acatcccgaa ggcggacggg cggctacggc cgctcggcat cgccacgctg gaagacaaga
     1261 tcgtccagcg ggccgtcgtc gaggtgctca acgccgtcta cgaagaggac ttcctgggct
     1321 tctcctacgg gttccggcct gggcgcggcc cgcatgacgc gttggacgcg ctcgcggtcg
     1381 ggatcacgcg gaagagggtg aactgggtgc tcgacgcgga catccgcgag ttcttggagt
     1441 catcttcaca ctgctccttt cgttggttgt cggtttcaga agagggggtc ggtgggtggc
     1501 gggacctgta ttcgcaggcc ttttcgccgt ccggtgcgga cgtggacggc tttgagctcg
     1561 ccgcgcttta cacgctgcaa tacggtctgg cgggagacgc cgagggcgag ggtggcctcg
     1621 agcatggcga gccagccgtc gggggcgtcg tcgacgaaga ggttgcgcag ctcgtcggtc
     1681 atgcggatgc gccagggggc gccgggggtg tcctgctcgc cggcgacgaa gccgtcgttg
     1741 atccagcgat gcagggtcga ggccgcgacg ccgagttccc tggcggcctc ggcgatggtg
     1801 agcaactcgc cgtcgggcgc tttggggcgg ccgggcgagt gtccggggat gttccagtgc
     1861 tggcgtaggg aggccacgcg ggtggcggtg aaggtcaggc cgcgggcggt gcggcggccc
     1921 tgccggttga ggatcccggc ggccttgtcg tcggtgtagt ggacggcgag gcggcggatc
     1981 aggtcgacgg tgtcctcgtc ggtgcggatc gtgggttggc gccggcggcc ggggacggtc
     2041 agctcggtga gtgcgccgcc tttccagcgg atgagcaggt cggtgtggcc ggcgtcgtcg
     2101 tcgcgcacga cggtgacctt cacctcgtcg atcagggtcc gtagcagcag cttgcggtcg
     2161 cggtcggtgg tcgtgggggc gtcccagacc tggccgaggt tgtccccgag cgcgaggatg
     2221 tcggcatgct cggtgtcggt cagggcgcgg gggcgggcct gctcgcggcg ggcgagttcg
     2281 gcctcggtgg cggcgagttc ggtcagcgcc ttctcccagg cggcctccag gccgcgggcg
     2341 acgagccggt tgtccgggtc gacggcctgg tagcggcgct cggcgcggcc ggcgtcgtaa
     2401 cgggcgcgtt cgacgtggcg gcggtgctgg gcgagggcgg tgtcgtgggc gttctcgagg
     2461 tgttcggcgg cggtgaggca ggcggtgagc gccgcggggg cgagcgcggc caggaacgcg
     2521 tcggagacgg cggcgtcgag cgcgacgccg ccgatgtgca ggtggcgggt gccgcggccg
     2581 tccacgatgg tggcggggcc ctggcagtag tagcccgggg tggccttggc ggggccctgg
     2641 tagaagacgg tcagcttacg gccgcaggtc ccgcaggtcg ccaggccctg cagtagggcg
     2701 cagccctccc ggaccgcgcc ggtgccgggc cggtgggcct cgggacggat gttcttgccg
     2761 atcttcgcca ggttggcctc gtaggcgtcc cagtcgatgt acccctcgtg gtggccgcgg
     2821 atcaggacct cccactcctc gcgggggacg ggcttccggc gggtgcgcac ggtgccgtcc
     2881 tcgccgacgt ggctgtgctt gcgggtgcgg ccgtagacgt aggcgccggc gtaggccggg
     2941 t
//
LOCUS       DASUYN010000114         2203 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1358712, whole genome shotgun sequence.
ACCESSION   DASUYN010000114 DASUYN010000000
VERSION     DASUYN010000114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2203)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2203)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2203
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1358712"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(63..1436)
                     /gene="radA"
                     /locus_tag="VF061_02185"
     CDS             complement(63..1436)
                     /gene="radA"
                     /locus_tag="VF061_02185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HEX6668335.1"
                     /translation="MARARSVYRCTECGHEHAKWVGRCEGCGAWNAVAEEPVVVGRTG
                     GPADRRKGGTLPRSVGPPSRLREVATEALHRWRTGINEFDFVLGGGIVPGSMILIGGE
                     PGIGKSTLLLQAAARLEAAGRTVLYASGEESPDQIRLRADRLTEDAGAVHVLGETRLE
                     AIVGAAEAVSADVVVIDSIQTVYTETLESAPGNVGQVRECSGQLMRFAKESGTSVVVV
                     GHVTKGGGIAGPKTLEHIVDTVLYFEGEVTLDYRLLRTTKNRFGSVDELGVFSMTERG
                     LVAVPNPSAVFLAARADGISGSAVTALMEGTRPVLVEVQALAAKSGYGTPQRVATGVD
                     PKRLAVLLAVLERRAETSFAELDVFVQVTAGVRLTEPGADLAVAAALLSSLYNRPAPA
                     DVIFLGEIGLGGEIRPSGALERRIAEAARLGFRRVFGSSRSTSQVAGVSMVGLDHVEQ
                     LVRALAA"
     gene            complement(1439..>2203)
                     /locus_tag="VF061_02190"
     CDS             complement(1439..>2203)
                     /locus_tag="VF061_02190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaB-like helicase C-terminal domain-containing
                     protein"
                     /protein_id="HEX6668336.1"
                     /translation="ALTSGFQRAELVVVAARPSMGKTAFCLNIAANAAAEGQGVAIFS
                     LEMSKEALVQRMLTATARVDSHRVRQGSLRDSDFTQLARAAGLLQTYQVWIDDTPSIT
                     LLEMRGKARRLKIDNDLKLIIVDYLQLMRSPEYSENRVQEISDISRSLKALARELEVP
                     VIALSQLSRASEQRGGERKPILSDLRDSGAIEQDADLVIFIHRPEYYDREDESKRGLA
                     EVMLAKNRNGPTGDVQLKFTREYTRFDSFSNRDDQE"
BASE COUNT          312 a          797 c          774 g          320 t
ORIGIN      
        1 gcttggggac ctcgccgccg aggcgactcc cctgccctgc ggcgaccacc actacgccga
       61 cgtcacgcgg caagcgcgcg caccagctgc tcgacgtggt cgaggccgac catcgagacg
      121 ccggccacct gggacgtgct ccgggaggag ccgaacaccc ggcggaagcc gagccgcgcc
      181 gcctccgcga tccggcgctc cagggctccg ctgggccgga tctcgccgcc gaggccgatc
      241 tccccgagga agatcacgtc cgccggagcg ggacggttgt acaggctgct cagcagcgcg
      301 gcggccacgg cgagatcggc gccgggctcc gtgaggcgga cgcccgcggt gacctggacg
      361 aagacgtcga gctcggcgaa ggaggtctcc gcccggcgct cgagcacggc gaggagcacc
      421 gcgagccgct tcggatcgac ccccgttgcc acgcgctggg gcgtgccata accggacttg
      481 gcggccagcg cctgtacttc taccaggacc gggcgggtgc cttccatcag ggcggtgacc
      541 gcgctgccgc tgatcccgtc ggcccgcgcc gcgaggaaga cggcggaggg gttgggcacc
      601 gcgaccaggc cgcgctcggt catggagaac acgcccagct cgtcgaccga gccgaagcga
      661 ttcttggtgg tgcggaggag ccggtagtcg agcgtgacct cgccctcgaa gtagagcacc
      721 gtgtccacga tgtgctccag ggtcttgggc cccgcgatgc ccccgccctt ggtgacgtgg
      781 ccgaccacca cgaccgacgt gccgctctcc ttggcgaagc gcatgagctg cccggaacac
      841 tctctcacct gtccgacgtt cccgggcgcg ctttccagcg tctcggtgta cacggtctgg
      901 atggaatcga tgaccacgac gtcggcggag accgcctcgg cggcgccgac gatggcctcc
      961 agccgggtct cccccagcac gtgcaccgca ccggcgtctt cggtgagacg gtcggcgcgg
     1021 agccggatct ggtccggcga ttcctcgccg ctcgcgtaga gcaccgtacg gcccgccgcc
     1081 tccagccggg ccgcggcctg caacaggagc gtgctcttgc cgatcccggg ctcgccgccg
     1141 atcaggatca tcgaccccgg cacgatcccg ccgcccagca cgaagtcgaa ctcgttgatc
     1201 ccggtgcgcc agcggtggag cgcctcggtg gcgacctccc ggaggcggga cggcggaccg
     1261 acggaccgcg gcagcgtgcc ccccttccgc cggtccgccg gtccgccggt ccgcccgacc
     1321 accaccggct cctccgcgac ggcgttccac gccccgcagc cctcgcagcg gccgacccac
     1381 ttggcgtgct cgtggccgca ttcggtgcag cggtagaccg accgcgcccg cgccatcgct
     1441 actcctggtc gtcccggttg gagaagctgt cgaagcgggt gtactcgcgg gtgaacttga
     1501 gctggacgtc gccggtgggc ccgttgcggt tcttggcgag catgacctcg gcgagccccc
     1561 gcttggactc gtcctcccgg tcgtagtact cgggccggtg gatgaagatg acgaggtcgg
     1621 cgtcctgctc gatggcgccg gaatcgcgca ggtcggagag gatgggcttg cgctcgccgc
     1681 cgcgctgctc ggaggcgcgg gaaagctgcg acagggcgat gaccgggacc tcgagctcgc
     1741 gcgccagcgc cttcagcgag cgggagatgt cggagatctc ctgcacccgg ttctcggagt
     1801 actcggggct ccgcatcagc tgaaggtagt ccacgatgat gagcttgagg tcgttgtcga
     1861 tcttgagccg gcgcgccttg ccccgcatct ccagcagggt gatggacggc gtatcgtcga
     1921 tccagacctg gtaggtctgg agcagccccg ccgcgcgggc gagctgggtg aagtcggagt
     1981 cgcgcagcga gccctgccgc acgcggtggc tgtccacccg cgcggtagcg gtgagcatgc
     2041 gctgcaccag cgcctccttc gacatttcca gcgagaagat ggcgaccccc tgcccctcgg
     2101 ctgccgcgtt ggcggcgatg ttgaggcaga acgccgtctt gcccatggac gggcgggccg
     2161 ccaccacgac cagctccgct cgctggaacc ccgacgtcag cgc
//
LOCUS       DASUYN010000115         3003 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_478313, whole genome shotgun sequence.
ACCESSION   DASUYN010000115 DASUYN010000000
VERSION     DASUYN010000115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3003
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_478313"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(178..2043)
                     /locus_tag="VF061_02195"
     CDS             complement(178..2043)
                     /locus_tag="VF061_02195"
                     /inference="COORDINATES: protein motif:HMM:NF012861.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005247 - voltage-gated chloride channel
                     activity [Evidence IEA];
                     GO_process: GO:0006821 - chloride transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HEX6668337.1"
                     /translation="MLPRLPTLPDPTRPARHAARLAARRAGGVWYRFADWFNGLNLNE
                     NTILLGFAVAVGIGAGLGVVAFYRLIDLAFWILYLIPAVYLTEAGILAYRPLLTGFGL
                     VWAHLIMRGPGRSHEGLNIPDVQRAVAREGGRLPARPALARTAASAVTLGAGGAAGSE
                     GPVAVLGAALASFLGRAFRFDPARTKVLVAAGAAAGISAAFNAPLAGAFFALEEILGS
                     LAVGAFPSVVVASVVAAVVSHTFLGNNPAFPIPEEYGYALQREVFVFFPFLGVVAGLV
                     AVLFVRVYFGMETLGKRLEGPRWQLALLGGMLVGILVILSKGLLVGHGHFAVHLEVFG
                     GMSWGALALLALGSILATSITLNCGGSGGVFTPSLFVGAATGGSFGVALTTLFPDLGL
                     RPEAYALVGMGAVVAAATNAPITGMLLVFEMTNDYNIVLPLMLATVIANLVARRLEPD
                     SLYTGWLRRRGERLQHGADRDVLAGLRVADAFDPAPHVVGETAPLGQLLEHLGRGAYT
                     DLPVVDEHRRLVGIIPLAEIGRLANEPREKTEGLVASEVAIPAETVAPGDTLLDAIRR
                     MGVRGAPSIPVVDRATGHLLGLVSRAHVLALYERAVAGGATGEHPVSFPPGRRPA"
     gene            complement(2044..2580)
                     /locus_tag="VF061_02200"
     CDS             complement(2044..2580)
                     /locus_tag="VF061_02200"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEX6668338.1"
                     /translation="MPLVSTTRLYSGRIVNLDLDSVRFPDESVGQLEMLRHPGAAAVV
                     PFLDPPGGADPRVVLIRQFRHAAEGYIWEVPAGRLDAGEGPESCAERELEEETGMRAR
                     RLERLTTIYTTPGFTDERIHLFLADGLEPGAQRREADEFMELHTLRWSEVLGMIARGE
                     IADGKTLVSLLFVQSFRR"
     gene            complement(2653..>3003)
                     /locus_tag="VF061_02205"
     CDS             complement(2653..>3003)
                     /locus_tag="VF061_02205"
                     /inference="COORDINATES: protein motif:HMM:NF014724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HEX6668339.1"
                     /translation="GVGRRDTISEATVGRRYLMAREVPGGDVVAQPVGRSTRTSMTAV
                     GDWLRQRDLRRVLLVSDPFHMFRLRLEARRTDLEPYTSPTESSPISANPVLELRYLFA
                     EGLKVPVAWVRSMM"
BASE COUNT          477 a         1039 c         1134 g          353 t
ORIGIN      
        1 gcgctggtcg aggttgaagt cccggagcga gggatcgagg acgcggtcca gcagcgcccg
       61 caacgcctcg tccttgagca ggtcctccgg gccgtggaag tagtacgccg gggcgaggcc
      121 gcccttgggg agcgatcgca ggaaggcgtc catggtctgc gcgggcatgg gcgaaagcta
      181 cgccggccgg cggccagggg gaaacgagac gggatgctcg ccggtggcgc cgccggcgac
      241 ggcacgctcg tacagcgcga gcacgtgggc gcggcttacg aggccgagga gatggccggt
      301 ggcgcggtcc accacgggaa tggacggcgc gccgcgcacc cccatccgcc ggatcgcgtc
      361 cagcagcgtg tcgcccggtg ccacggtctc cgcgggaatc gccacctctg acgccaccag
      421 gccctcggtc ttctcccgcg gctcattggc caggcggccg atctcggcga gcgggatgat
      481 gccgaccagc cgccgatgct cgtccaccac cggcaggtcg gtgtaggcgc cgcggccgag
      541 gtgctccagg agctgaccca ggggcgcggt ctcccccacg acgtggggcg cggggtcgaa
      601 ggcgtcggcc acccgcagcc cggcgagcac gtcgcggtcg gcgccgtgct ggagtcgctc
      661 gccacggcgg cggagccagc cggtgtagag cgagtccggc tccagccgcc gagccaccag
      721 gttggcgatc accgtcgcga gcatgagcgg gaggacgatg ttgtagtcgt tggtcatctc
      781 gaacaccagc agcataccgg tgatcggcgc gttggtggcc gcggcgacca cggcgcccat
      841 ccccaccagg gcgtaggcct cgggacgcag gccaaggtcg gggaagagcg tggtgagcgc
      901 gacgccgaag gagccgcccg tggccgcgcc cacgaagagc gacggggtga agacaccgcc
      961 cgagccgccg cagttcaggg tgatcgaggt ggcgaggatg ctgccgagcg cgaggagcgc
     1021 gagggccccc caggacatgc cgccgaacac ctccaggtgc accgcaaagt ggccgtggcc
     1081 caccagcagg cccttggaga ggatcaccag gatgccgacc agcatgccgc ccaggagggc
     1141 gagctgccag cgcgggccct cgagccgttt ccccagcgtc tccatgccga agtacacccg
     1201 cacgaacagc accgcgacca gtccggcgac gacaccgagg aagggaaaga agacgaacac
     1261 ctcgcgctgg agggcgtacc cgtactcctc cgggatcggg aacgctgggt tgttgccgag
     1321 gaaggtgtgg gacacgaccg cggcgaccac gctggccacc accaccgagg ggaacgcccc
     1381 caccgcgagg gagccgagga tctcctcgag ggcgaagaag gcgccggcga gcggggcgtt
     1441 gaacgcggcg gagatccccg cggccgcgcc ggcggccacc agcaccttgg tccgcgcggg
     1501 gtcgaaccgg aaggcgcgcc cgaggaacga cgcgagtgcc gcgcccagta cggcgaccgg
     1561 cccctcgctc ccggcggccc cgcccgcgcc gagggtgacg gcgctcgccg cggtgcgggc
     1621 cagcgccggg cgggcgggga ggcggccacc ctcgcgggcg accgcgcgct gcacgtcggg
     1681 gatgttgagc ccctcgtggc tccgtcccgg cccgcgcatg atgaggtgcg cccacaccag
     1741 gccgaagccg gtgagcaggg gccgatacgc gaggatcccg gcctcggtga ggtagacggc
     1801 cgggatgaga tagaggatcc agaaggcgag gtcgatcagc cgatagaacg ccaccacacc
     1861 cagcccggcg ccgatgccga cggccacggc aaagccgagg aggatggtgt tctcgttgag
     1921 gttcagccca ttgaaccagt cggcgaaccg gtaccacacg ccgccggccc ggcgggcggc
     1981 cagccgggcg gcgtggcgcg cggggcgggt ggggtcgggg agcgtcggca gccggggcag
     2041 catctaccgc cggaagctct ggacgaagag caggctcacg agggtcttcc cgtcggcgat
     2101 ctcgccgcgc gcgatcatgc ccagtacctc ggaccagcgc agcgtgtgca gctccatgaa
     2161 ctcgtccgcc tcccgccgct gcgcgccggg ctcgaggccg tcggcgagga agagatggat
     2221 gcgctcgtcg gtgaagcccg gggtggtata gatcgtggtg agccgctcca gccgccgtgc
     2281 ccgcatcccg gtctcctctt ccagctcccg ctcggcacag gactcgggcc cctcgccggc
     2341 atcgagccgt ccggcgggaa cctcccagat gtagccctcg gccgcatggc ggaactggcg
     2401 gatgagcacc acgcgcggat cggcgccgcc cggcgggtcg aggaagggca ccaccgccgc
     2461 ggcccccgga tggcgcaaca tctcgagctg gcccaccgat tcatcgggga agcggacgct
     2521 gtcgagatcg aggttgacga tgcggcccga atagaggcgc gtggtggaga cgaggggcat
     2581 gggcgccgtg ggtggagggg tcgagtgatt tcacgttctg ccttggggct gctcggattc
     2641 gagcccaccg ctctacatca tgctcctcac ccaggccacc ggcaccttca gcccctcggc
     2701 gaagaggtag cggagctcca gcacggggtt ggcggagatg gggctgctct ccgtgggcga
     2761 ggtgtagggc tcgaggtcgg tgcggcgggc ctccaggcgg agccggaaca tgtgaaacgg
     2821 atcgctcacc agcagcaccc gccggaggtc ccgctgccgc agccagtcgc ccaccgcggt
     2881 catggacgtg cgggtggagc gcccgaccgg ctgggccacc acgtcgcccc cggggacctc
     2941 ccgcgccatc aggtagcggc ggccgacggt cgcctcgctg atggtgtccc gccggccgac
     3001 ccc
//
LOCUS       DASUYN010000116         2681 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1138694, whole genome shotgun sequence.
ACCESSION   DASUYN010000116 DASUYN010000000
VERSION     DASUYN010000116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2681)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2681)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2681
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1138694"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..658)
                     /locus_tag="VF061_02210"
     CDS             complement(<1..658)
                     /locus_tag="VF061_02210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668340.1"
                     /translation="MSTTRPELGPALAATWRHPRAGVADLRAWQDARLRRLVLHAYES
                     VPFYRRLFDRHRLHPRHIRGVVDLDLIPTVDKAMMRQAGPAALLARGHDAGSLLTGRT
                     SGSSGEPFTVYRTWLEDKLQYLLRLRTFHAFGVRHRDRVVAVGVGGRPDRGDGKLIGR
                     SLRALGFHHRQLVDGLQEPARVAVQLREARPDVLVGLPGMLDRLTAPELTEVVADVRP
                     R"
     gene            complement(655..1623)
                     /locus_tag="VF061_02215"
     CDS             complement(655..1623)
                     /locus_tag="VF061_02215"
                     /inference="COORDINATES: protein motif:HMM:NF017652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-5-aminohexanoate cleavage protein"
                     /protein_id="HEX6668341.1"
                     /translation="MIQRTGDRQPRRVSAHPGRTRPLPHPLTPYTELIVNFCPTGMIP
                     TKAMTPHVPVSPDEVVEQACQALERGIAIVHLHARDDEGEPSYQARIYEEMILGIRAH
                     HPDAIMCVSCSGRNFPEFERRSEVLELTGAARPDLASLTLTSLDFPTGTSQNAPDMVI
                     ALAEKMVANGVKPELECFDYGMINAGNMLISKGLLGEPPYYFNLLLGSRYSVPATARH
                     LAGMLEDLPPESLWSAAGIGLFQLPMNALAIAMGGHCRVGLEDNIYHGFDRTELATNQ
                     GLVERVADITESFGRPLAGPVRARELLGLPPSAARGATTPSLKAVG"
     gene            complement(1620..>2681)
                     /locus_tag="VF061_02220"
     CDS             complement(1620..>2681)
                     /locus_tag="VF061_02220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668342.1"
                     /translation="VTKVELREAGGDVLLGGRVRPEWRSSSSSGSTGEPFRVYYEPRA
                     WATLKILVKLRARSSCGTRPADRVALLDAVPPAESAPRAAGRVARISILQPAARIAAE
                     LAAFTPDTIYGLPSALLEAGEELRASGARLRVKRIFTSGELLRPVVRQAITAAFGAPV
                     FDVYGSSETKEIAWECPAGGMHINADVVRLEVLNEANRPVPRGVEGNLVATLLVNRAM
                     PLLRYRIGDRGSLLAERCECHHPFPLLGVVTGRRADMLVLEGGHRVSPYALTSALERV
                     GDLLRYQVTQLEPARLRVRAILEVEADRAQVAGRIRSAIRGEVAPFLETEVEFVDRLP
                     TGPRAKFRVVEPLPSLEIA"
BASE COUNT          368 a          955 c         1013 g          345 t
ORIGIN      
        1 cccgcggccg cacgtccgcg acgacctccg tgagctcggg ggcggtgagg cggtcgagca
       61 tgccggggag gcccaccagg acgtcgggcc gcgcctcgcg gagctggacc gccacccggg
      121 ccggctcctg gagcccgtcc accagctgcc ggtggtgaaa ccccagcgcg cgcagcgagc
      181 ggccgatcag cttcccgtcc ccccggtccg gccggcctcc gacgcccact gccacgaccc
      241 ggtcgcggtg gcgcacgccg aaggcgtgaa aggtccggag ccggagcagg tactggagct
      301 tgtcctccag ccaggtgcga tacaccgtga acggctcgcc cgacgagccg ctggtgcgcc
      361 cggtgagcag cgagccggcg tcgtgtcccc gggccagcag ggcagcgggc cccgcctgac
      421 gcatcatcgc cttgtcgacc gtcgggatca gatcgaggtc gacgacgccg cggatgtggc
      481 gggggtgcag gcgatgccgg tcgaacagac ggcggtagaa cggcaccgac tcgtaggcgt
      541 ggagcacgag cctccgcagc ctcgcgtcct gccacgcgcg cagatcggcg acgccggcac
      601 gcgggtgccg ccaggtcgcc gcgagcgccg gaccgagctc gggccgggtg gtactcatcc
      661 gacggccttg agggacggcg tggtggcgcc gcgcgcggcg gagggcggca ggcccagcag
      721 ctcgcgggcg cggaccgggc cggcgagcgg ccgtccgaag ctctcggtga tgtccgcgac
      781 ccgctccacc aggccctggt tggtggccag ctcggtccgg tcgaacccgt ggtagatgtt
      841 gtcctccagc ccgacccggc agtgaccgcc catcgcgatc gcgagggcgt tcatcggaag
      901 ctggaagagc ccgatccccg cggccgacca gagcgactcg ggcggaaggt cctccagcat
      961 gccggcgagg tgccgcgcgg tcgcggggac ggagtagcgg gagccgagca ggaggttgaa
     1021 gtagtacggc ggctccccca gcaggccttt ggagatcagc atgttgcccg cgttgatcat
     1081 gccgtagtcg aagcactcca gctcgggctt gaccccgttg gccaccatct tctccgccag
     1141 cgcgatcacc atgtccggcg cgttctggct ggtgccggtg gggaagtcga ggctggtgag
     1201 ggtgaggctc gcgaggtcgg gccgggcggc cccggtcagc tccagcacct cgctccgccg
     1261 ctcgaactcc ggaaagttcc ggccggagca gctgacgcac atgatggcgt cgggatggtg
     1321 ggcgcgaatg ccgaggatca tctcctcgta gatgcgggcc tggtagctgg gctcgccctc
     1381 gtcgtcgcgc gcgtgcaggt gcacgatcgc gatgccccgc tcgagcgcct ggcaggcctg
     1441 ctccaccacc tcgtccggcg acaccggcac gtgcggcgtc atcgccttgg tggggatcat
     1501 gccggtgggg cagaagttga cgatcagctc ggtgtacggc gtcagcggat ggggcagcgg
     1561 ccgcgtgcgg cccggatgcg cgctcacccg ccgcggctgg cggtcgccgg tgcgctggat
     1621 catgcgatct ccagggaagg gagcggctcg accacccgga acttggcgcg gggcccggtc
     1681 ggcaggcggt ccacgaactc gacctcggtt tccaggaacg gcgcgacctc gccccggatg
     1741 gcggagcgga tccggccggc cacctgggcg cggtcggcct cgacctcgag gatggcccgc
     1801 acccgcagcc gggccggctc gagctgcgtc acctggtagc ggagcaggtc acccacccgc
     1861 tccagggcgg aggtgagcgc gtagggggag acccggtgcc cgccctcgag caccagcatg
     1921 tcggcccgac ggccggtcac caccccgagc agcgggaagg ggtggtggca ctcgcagcgc
     1981 tcggcgagga ggctcccgcg gtccccgatc cggtagcgca gcagcggcat tgcgcggttc
     2041 accagcagcg tggccaccag gttcccctcg acgcctcgcg gcaccggccg gttggcctcg
     2101 ttgagcacct cgagccggac gacgtccgcg ttgatgtgca tgccgcccgc ggggcactcc
     2161 caggcgatct ccttggtctc cgagctgccg tacacgtcga acaccggcgc gccgaaggcg
     2221 gccgtgatcg cctgccgcac cacggggcgg agcagctcgc cgctggtgaa gatccgcttg
     2281 acccgcagcc gggcgccgct ggcccgcagc tcctcaccgg cctcgagcag ggcggagggc
     2341 aggccgtaga tggtgtcggg ggtgaaggcc gccagctcgg ccgcgatccg ggccgccggc
     2401 tgcaggatgc tgatccgggc cacccggccg gcggcgcggg gcgcgctctc cgccggcggc
     2461 accgcgtcga gcagcgcgac acggtcggcg ggccgggtgc cgcaggagct gcgggcgcgg
     2521 agcttgacca ggatcttgag cgtggcccac gcgcgcggct cgtaatacac ccgaaacggc
     2581 tcgccggtcg agcccgacga gctggacgag cgccactcgg ggcggacccg gcctccgagg
     2641 aggacgtcgc cgcccgcctc gcgcagctcc accttggtga c
//
LOCUS       DASUYN010000117         9032 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1138794, whole genome shotgun sequence.
ACCESSION   DASUYN010000117 DASUYN010000000
VERSION     DASUYN010000117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9032)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9032)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9032
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1138794"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..214)
                     /locus_tag="VF061_02225"
     CDS             complement(<1..214)
                     /locus_tag="VF061_02225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668343.1"
                     /translation="METAIAPRERALRALDKIRRENVGPHGPYLSAVERLYMMTIATG
                     VQAVAEANYGRTEEALWYMDRIAETFS"
     gene            complement(165..1952)
                     /locus_tag="VF061_02230"
     CDS             complement(165..1952)
                     /locus_tag="VF061_02230"
                     /inference="COORDINATES: protein motif:HMM:NF036578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668344.1"
                     /translation="MRLSVPPTLAGLLLALVPPQPLVSQGEPAGSAMAGISSQGHDGD
                     QPYVTAGDRAYLIGSQDGGFPDMGTHVPGEMAGLWIHPIKLADGFWATVRDASTGREV
                     ALTRADRLVTYPFGTRLRYDAPLDGLEIERFQFSPDGHPGVVIQYQLTNASDRAKRVD
                     LSFAVRTDLSPVWYSEKIGITDAPDTVTWRAGDRTFVGRDTGHNWVVVWGAPGTRDAG
                     SFAGTNVPRTAGSGATAAARYPVSVGPRRTATLRFVFAGSASGEADALRTYRYLAANH
                     ATLLERKRQRYAALLGRARVTIPDKRLQAVYDWVRVNMEWLVREVPGTGRGLGAGLME
                     YPWWFGTETYSLQALMATGDFQLPQRTLGLLKRYSDSTNGNGRIVHEVTTAGAISNPG
                     NSQETAQFILTLGRLLDWSGDHEFAREMYPAMKQGLRWLLADMDRDGNMFPGGYGIME
                     VLGLNAELIDVSVYTQQALEATARVAGVLGEADTAAHYARLASELKERINRRFWIEQE
                     GSYADFYGTRAQAVSAAEGARKQLGLKGEGPADPTGAGADAGLHSPGAELRRHAGHGQ
                     GMAHQQELGHRDADGDRHRTPRAGAAGAG"
     gene            complement(2006..2590)
                     /locus_tag="VF061_02235"
     CDS             complement(2006..2590)
                     /locus_tag="VF061_02235"
                     /inference="COORDINATES: protein motif:HMM:NF023363.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3455 domain-containing protein"
                     /protein_id="HEX6668345.1"
                     /translation="MTANALLRFRGSLVAIAAAASLAACDERSALGPEEGAAVSTAAL
                     APARLPDLDTCDELQVDEGSKLVFHAYAEGVQIYQWDGGSWVFRGPSATLYANAGGTG
                     VVGIHYGGPTWESQSGGLVVGTLNTPCERGPADIPWLLLDVVRTEGPGIFHRVASIQR
                     VNTVGGRAPTTAGSFPGEVRNVAYTAEYYFYRAP"
     gene            2773..4077
                     /locus_tag="VF061_02240"
     CDS             2773..4077
                     /locus_tag="VF061_02240"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEX6668346.1"
                     /translation="MTDTARADESLRCVIGPVGLAASVVNIVVGGSIFVLPAVLAREL
                     GTAAPAAYLTGAVVMGLVTLAFAEAGRRTARSGGPYAYVESAFGGFPGFLTGLLTWLA
                     VVFACAAVAAALVDSLRGMLPLLDLPWARGSALVLLFAVLALVNVRGVQAGTRLAAAA
                     AIAKSAGLLLFVVLAARFVQSDNLEWSWPAGDGGLGRATVLVMFAVAGLEVPLCAGGE
                     IRDPDRTVPRALAGAIGFVVLLYVTVHLIAQGALGAALPDSQAPLADALAKGGSGGHA
                     LLLAVGAVSMFGYLSGDTLGASRILFAFGRDGLLPRRLAAVHPLTRAPHVAVLVHTLV
                     AAGLAMTGSFAVLAPIASVAIIVVYLGCCAAAWVLARRAGGEALTEGPRLGMVAPLAA
                     IAGLLWVLSHSTRPEFLAVGAVLVIGSGIYWLGRRFRRGTFP"
     gene            complement(4128..4346)
                     /locus_tag="VF061_02245"
     CDS             complement(4128..4346)
                     /locus_tag="VF061_02245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668347.1"
                     /translation="MQRQLAVVFVVAALVGGCREADRDTGAADNDRAGVDTIVESETV
                     KDTTIITADTSIDVDTVEKTDNIDDDND"
     gene            4445..5338
                     /locus_tag="VF061_02250"
     CDS             4445..5338
                     /locus_tag="VF061_02250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HEX6668348.1"
                     /translation="MRIGIDLGGTKIEAIALAAGSAVEVRRRIPTPRAYAPTLDAITH
                     LVSGLETETGQRASVGVGIPGVVSRASGLVKNANSTWLIGQPLQADLESRLGRAVRVA
                     NDANCFTLSEAIDGAGQGFETVFGVILGTGVGGGIAIRRRLHDGPNQIAGEWGHNPLP
                     WMTDEERAAAPPCYCGKRGCIETFLSGPGFERDYARHTGAVGSSRDIVSTAAAGNRHA
                     IEAIQRYVDRLARGLAAVINLLDPDAVVLGGGMSNLPDLAPAASGLLPRYVFSDLVLT
                     KVLPNLHGDSSGVRGAAWLWP"
     gene            5377..6480
                     /locus_tag="VF061_02255"
     CDS             5377..6480
                     /locus_tag="VF061_02255"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX6668349.1"
                     /translation="MPSIELGLDTFGDVTADADGRLLPHARVLRDVIAEAELADRLGV
                     DFFGVGEHHRPDFAISAPEVLLAAIAGRTERIRLGTAVTILSTDDPVRVYQRFSTLDA
                     VSGGRAEVILGRGSFTESFPLFGHSLDDYEVLFEEKLALWAALRDADRTGEPVRWKGT
                     VRPPLDGVRVFPPVERPPLRTWVGVGGSPESVVRAARYRFPLTLAVIGGDPRRFAPYV
                     ELYHRALAQLGADRLPVGVHSPGHVAETDRRAREELWPAYEVMRNRIGAERGWAPTSR
                     AEFEREAAEGSLYVGSPETVARRIAATLRALRASRFDLKYSAGTLGHDPMLRSIELYG
                     REVIPRVRGLLADAPAGDPGLSARGPAARPAPR"
     gene            6592..7323
                     /locus_tag="VF061_02260"
     CDS             6592..7323
                     /locus_tag="VF061_02260"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HEX6668350.1"
                     /translation="MPLSAQGFRFAAVVGLFLGCGPEDRQAPTTADLAIEKAPERSGD
                     AQVGVAGEPLPEDLRARVTRDGEPVEGVTVYWTTFQGTMDPPSDVTDADGISASRWTT
                     QYSYLEEEAFASLDPVTGPRAPGSVLPGMIMYTALAYPDPEGRNTVLVLNEGGNRFEP
                     ASITITVGDTINWFWPVGSAGHNVVPDDGNAPPTSGAPAGYPKFLSFIFAVPGVYHYH
                     CAVHGGPGGVGMSGTVTVVPRTTQD"
     gene            complement(7310..8221)
                     /gene="uvsE"
                     /locus_tag="VF061_02265"
     CDS             complement(7310..8221)
                     /gene="uvsE"
                     /locus_tag="VF061_02265"
                     /inference="COORDINATES: protein motif:HMM:TIGR00629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0009650 - UV protection [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UV DNA damage repair endonuclease UvsE"
                     /protein_id="HEX6668351.1"
                     /translation="MSPSALRFGLCCQFLDSPIRFRTATHRYVSGLTPAERLRYLAAI
                     AADNAAALAAAVVRCAELGIGAFRINSQILPLGTHPTSGYVLEALDRRGDIRAAFERA
                     GRLARDHDIRLSLHPDQFVVLNSERAEVVRSSAEELEFQSGIAALVGADTVVFHGGSS
                     AGGTVAAVDRLDRGLDLLSPAARRRVALENDDHRFTPADLLPLCRRAGVPLVYDAHHH
                     RCHGDGLPVEEATELAAATWDGREPWTHISSPREGWGASNPRPHADYIDPKDFPDAWL
                     GRAMTVDVEAKAKERAVLALMGALSPA"
     gene            complement(8240..>9032)
                     /locus_tag="VF061_02270"
     CDS             complement(8240..>9032)
                     /locus_tag="VF061_02270"
                     /inference="COORDINATES: protein motif:HMM:NF014090.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="VIT1/CCC1 transporter family protein"
                     /protein_id="HEX6668352.1"
                     /translation="TPDGPVGSTALRLAQESKEHAQTLATLSGRAGEPWHRTGAGGFL
                     RNVVYGFNDGLTANFGLVAGMIGAQGSMEIAGHTVVVAGLAGAMADALSMGASGYLAA
                     KSEREVFEHEIAMEREEIRLMPDLEREELSLLYQAKGIPAAQADALATQLMSDPERAL
                     GEKVREELRIGEASSTPMREAWVTGTATALGALIPVVPLLVSTSPWAIWTSFAVAMLS
                     HFGVGAARSVFTGRGLLRSGMDMFLVGLGVAVVGYVLGDWIVRIL"
BASE COUNT         1216 a         3271 c         3131 g         1414 t
ORIGIN      
        1 gactgaacgt ctccgcgatc cggtccatgt accacagcgc ttcctcggtc cgtccgtagt
       61 tggcctcggc cacggcctgc acgccggtgg cgatggtcat catgtacagc cgctccacgg
      121 ccgacaggta cggcccgtga gggccgacgt tctcgcgacg aatcttatcc agcgcccgca
      181 gcgcccgctc gcggggtgcg atggcggtct ccatcggcgt cgcgatgacc cagttcttgt
      241 tggtgagcca tcccctggcc gtgtccggca tggcggcgaa gctccgcgcc aggcgagtgt
      301 agtcctgcat cagctcccgc tcccgtgggg tcagccggtc cctcgccctt gagcccgagc
      361 tgcttcctcg ctccctccgc cgcgctcacc gcctgggccc gggtcccata gaagtcggcg
      421 tacgaccctt cctgctcgat ccagaatcgc cggttgatgc gctccttcag ctccgaggcc
      481 agccgcgcat agtgggccgc ggtgtcggct tcacccagca ccccggcgac gcgcgccgtc
      541 gcctcgagcg cctgctgggt gtacaccgag acgtcgatca gctccgcgtt cagccccagg
      601 acctccatga tcccgtagcc tcccggaaac atgttcccgt cccggtccat gtcggccagc
      661 agccagcgaa ggccctgctt catcgcgggg tacatctccc gcgcgaactc gtggtcaccg
      721 ctccagtcca gcagcctgcc cagcgtcagg atgaactgcg ccgtctcctg gctgttgccg
      781 ggattggata tcgctcccgc ggtggtgacc tcgtggacga tccgtccatt gccgttggtg
      841 ctgtccgagt atcgcttcag caggccgagg gtgcgctgcg ggagctggaa gtcgccggtc
      901 gccatcagcg cctggaggga ataggtctcg gtgccgaacc accagggata ctccatcagt
      961 ccggccccca gccctcgtcc ggtgcccggc acctcccgga ccagccactc catgttgacc
     1021 cgcacccagt cgtagaccgc ctgcagccgc ttgtcgggta tcgtcaccct ggcccggccg
     1081 agcagcgcgg cgtaccgctg ccgcttcctt tcgagcagcg tggcgtgatt cgcggcgaga
     1141 taccggtagg tacgaagcgc gtcggcctct cccgaggcag agcccgcgaa gacgaatcgc
     1201 agggtggcgg tgcgacgcgg gcccaccgag acggggtagc gcgccgcggc ggtagcaccg
     1261 gagccggccg ttcgggggac gttcgtgccg gcgaaggatc ccgcatcgcg cgtcccggga
     1321 gcaccccaga cgacgaccca gttgtgtccg gtgtcccggc cgacgaaggt gcggtcgccg
     1381 gcccgccagg tgacggtgtc gggcgcgtcg gtgatcccga tcttctcgga gtaccacacc
     1441 gggctcaggt cggtccggac cgcgaaggag aggtccaccc gcttggcccg gtcgctcgcg
     1501 ttcgtgagct ggtactggat gaccacaccg ggatggccgt ccgggctgaa ctggaagcgc
     1561 tcgatctcga gcccgtcgag cggggcatcg tatcggagtc gggtgccgaa cggataggtg
     1621 acgagccgat ccgcccgggt gagcgcgacc tcgcggccgg tggacgcgtc tcggacggtg
     1681 gcccagaagc cgtccgccag cttgatcggg tgaatccaga gcccggccat ctccccgggg
     1741 acatgcgtgc ccatgtcggg aaacccgccg tcctggctcc cgatcaggta cgcgcgatca
     1801 ccggccgtga catagggctg gtcgccgtcg tggccctgac tggagatgcc cgccatggcg
     1861 ctgccggcgg gctcgccctg ggagacgagc ggttggggcg gcaccagcgc gagcagaagg
     1921 ccggcgaggg tcggaggtac ggagagcctc atccagggat gataaagccg tccgcacccg
     1981 ccggccctcg cggtccggcg aggcgtcaag gagcgcggta gaagtagtac tcggcggtgt
     2041 acgccacgtt cctcacctcg ccggggaagc tgccggcagt cgttggagcc cgccccccga
     2101 ccgtgttcac gcgctggatg gacgcgaccc gatggaagat gccgggcccc tcggtccgca
     2161 ccacatcgag caggagccag gggatatccg ccggaccccg ctcgcagggt gtgttgagcg
     2221 tgccgaccac gagaccgccg ctctggcttt cccaggtcgg gccgccgtag tggatcccca
     2281 ccacgcccgt tcccccggca ttggcataga gggtcgcgga cggccctctg aagacccagc
     2341 tcccgccgtc ccactggtag atctgcacgc cttcggcata ggcatgaaag acgagcttgc
     2401 tcccctcgtc tacctgcagc tcgtcgcagg tatcgagatc cgggaggcga gccggtgcga
     2461 gcgccgcggt ggagaccgcg gctccttcct cggggccgag cgcggacctc tcatcgcacg
     2521 cggccaggga agccgcggcg gcgatggcga cgagcgaacc tctgaagcga agcagggcat
     2581 tggcggtcat gggccgtcct cctgatgggg cggcgcgcgc cgccggggtg actccgcgtt
     2641 gtccgggggt gtgggtgtga cacgggagag tgcggaaatg cccggcgaca gcggacacgg
     2701 gccaggtgaa tggccagaag ctcggccgcc cggcatattc ccttaccccg cctgaaccct
     2761 tgccgagttc cgatgacgga taccgctcgt gcggacgagt ccctgcgttg cgtcatcggc
     2821 ccggtcggcc tggccgcgag cgtcgtcaac atcgtggtgg gcggcagcat cttcgtcctc
     2881 cccgccgttc tcgcccgcga gctcggtacc gccgcccccg cggcctacct gaccggtgcc
     2941 gtggtgatgg ggctcgtgac cctcgccttc gccgaggcgg ggcggagaac ggcccggagc
     3001 ggcggaccct acgcctacgt ggagagcgcc ttcggaggct ttcccgggtt tctcaccgga
     3061 ctgctgacct ggctggccgt ggtcttcgcg tgcgccgccg tcgccgcggc gctggtggac
     3121 tcgctgcgcg gcatgcttcc gctgctcgac ctgccctggg cccgcgggtc ggccctcgtg
     3181 ctgctgttcg ctgtgctcgc cctggtcaac gtgcggggcg ttcaggccgg cacccggctc
     3241 gcggcggcgg cggcgatcgc caagtccgcg gggcttctcc tgttcgtggt gctcgccgcc
     3301 cgcttcgtcc agagcgataa cctcgagtgg agctggccgg ccggcgacgg cggcctcggc
     3361 cgcgccacgg tcctcgtgat gttcgccgtg gccggcctgg aggtgccgct ctgcgccggt
     3421 ggggagattc gcgacccgga ccggaccgtg ccgcgcgccc tcgccggcgc gattgggttc
     3481 gtggtcctgc tgtacgtcac ggtccacctc atcgcgcagg gcgccctcgg cgccgcgctg
     3541 ccggattcgc aggcgccgct cgccgatgcg ctggccaagg gcggatccgg ggggcacgcc
     3601 ttactgctcg cggtcggcgc cgtctcgatg ttcggctatc tgtccggcga caccctgggg
     3661 gcctcgcgca tcctgttcgc cttcggccgg gacggcctgc tcccgcgccg gctcgccgcc
     3721 gtccatccgc tcacccgggc gcctcacgtt gcggtcctgg tgcacaccct ggtggccgcg
     3781 gggctcgcca tgacggggtc cttcgcggta ctggcgccga tcgcgagcgt cgccatcatc
     3841 gtggtgtatc tcggctgctg cgcggcggcg tgggtgctgg cccgccgggc gggcggggag
     3901 gcattgaccg agggaccccg ccttggcatg gtcgcgccgc tggcggcgat cgcgggattg
     3961 ctctgggtac tgtcgcacag cacccgaccc gagttcctgg cggtcggggc cgtgctcgtg
     4021 ataggaagcg ggatctattg gctgggccgt cgcttccgtc gcggcacctt tccgtgatca
     4081 ccaggagcgc gacgaaggcg acggttgtcg gcgggcatgc tgttccgcta gtcgttatcg
     4141 tcgtcgatgt tgtcggtctt ctcgacggta tccacgtcga tgctcgtgtc cgcggtgatt
     4201 atggtcgtgt ccttgacggt ctcggactcg actatcgtgt ccacgcccgc gcggtcgttg
     4261 tccgccgccc cggtgtcgcg atccgcctcc ctgcatcctc cgaccagcgc cgcaaccacg
     4321 aacactaccg cgagctgcct ttgcataacg cctcctccgt cgccgatggc tggtgctgct
     4381 ccagtgagga gtcacagtgg cacctgacgg tgcgtatgtg ccgtgactgg tctcacaagg
     4441 cctgatgcgg atcggcatcg acctcggcgg caccaagatc gaggccatcg ccctggccgc
     4501 gggaagcgca gtggaggtcc gccggcgcat tcccactccc cgggcctatg ccccgacact
     4561 cgatgccatc acccacctgg tgagcggcct cgaaaccgag accggccagc gggccagcgt
     4621 gggcgtcggc attcccggcg tcgtcagccg ggccagcggc ctggtcaaga acgccaacag
     4681 cacctggctg atcggccagc ccctccaggc ggacctggaa tcccggctcg ggcgcgccgt
     4741 tcgcgtcgcc aacgacgcca actgcttcac cctctcggag gccatcgacg gcgccggcca
     4801 gggcttcgag accgtcttcg gcgtcatcct cggcaccggc gtgggcggcg gcatcgcgat
     4861 ccggcggcgc ctccacgacg ggcccaacca gatcgccggg gagtggggcc acaacccgct
     4921 cccctggatg accgacgagg agcgcgccgc cgcgccgccc tgctactgcg ggaagcgcgg
     4981 gtgcatcgag acctttctct cggggccggg cttcgagcgc gactacgccc gccacacggg
     5041 agcggtcggc tccagccgcg atatcgtgag caccgcggcc gccgggaacc ggcacgcgat
     5101 cgaggcgatc cagcgctacg tggaccgcct cgcccgcggg ctcgccgccg tcatcaacct
     5161 cctcgatccc gacgccgtcg tgctgggcgg cggcatgtcg aaccttcccg atctcgcccc
     5221 cgcggcatcc ggcctgctac cccgctacgt gttctccgac ctggtcctca cgaaggtcct
     5281 ccccaacctt cacggcgatt cgagcggagt ccggggcgcc gcgtggctgt ggccctgaca
     5341 cgggaactgt gcgcgcaggc cggtggttac cggaccatgc catccatcga gttgggcctc
     5401 gacaccttcg gcgacgtcac cgcggatgcc gacggccgtc tcctgccgca cgctcgcgtg
     5461 ctgcgtgacg tgatcgccga agcggagctg gcggaccgcc tgggcgtgga cttcttcggc
     5521 gtcggcgagc accaccgccc cgacttcgcc atcagcgcac ccgaggtcct gctcgccgcc
     5581 attgccggcc gcaccgagcg gatccggctc ggcacggccg tgacgatcct gagcacggac
     5641 gacccggtcc gggtctacca gcgcttctcc accctcgacg ccgtgtccgg cggccgtgcc
     5701 gaagtgatcc tcggccgcgg ctccttcacc gagtcgttcc cgctcttcgg tcactcgctc
     5761 gacgactacg aggtcctctt cgaggagaag ctcgccctgt gggcggcgct ccgggacgcg
     5821 gaccgcaccg gtgagccggt ccggtggaag ggcacggtgc ggcccccact cgatggcgtg
     5881 cgggtcttcc cgccggtcga gcggcccccg ctccgcacct gggtcggcgt cggcggcagc
     5941 ccggaatcgg tggtacgggc ggcgcgctac cggttcccgt tgacgctcgc cgtcatcggc
     6001 ggcgaccccc gtcgcttcgc gccctacgtc gagctgtacc atcgggccct ggcccagctc
     6061 ggcgccgacc ggctgccggt aggggtgcat tcgccggggc acgtggcgga gaccgaccgc
     6121 cgggcgcgcg aggagctgtg gccggcctac gaggtgatgc ggaaccggat cggcgccgaa
     6181 cggggctggg ccccgaccag ccgggccgag ttcgagcgcg aggccgccga agggtcgctg
     6241 tacgtcgggt ctccagagac ggtggcccgc cggatcgccg cgacgctgcg cgccctccgc
     6301 gcctcccgct tcgacctcaa gtacagcgcc ggcaccctgg gacacgatcc catgctccgg
     6361 agcatcgagc tctacgggcg ggaggtgatc ccgcgtgtcc ggggcttgct cgccgacgcc
     6421 ccggccggcg atcccggcct cagcgctcga ggaccagccg cacgtccggc accccgttga
     6481 agcaccagtc gcacatcacc ctcacctcgc cgccggtcag gtccaagcga acgagctttg
     6541 ggcgtctccc agtggctggt ccttccagtg cccacggagc ggaggcgtca ggtgccactc
     6601 agcgctcagg gattccggtt tgcggctgtg gtcgggcttt tcctcgggtg cggtcccgag
     6661 gaccgtcagg cgccgaccac ggccgacctg gcgatcgaga aggctcccga gcggagtggg
     6721 gatgcgcagg tgggggtggc gggcgagccg ttgcccgaag atctccgtgc ccgcgtcact
     6781 cgggacgggg agccggtcga gggcgtgacc gtgtactgga cgaccttcca gggcacgatg
     6841 gatcctccca gcgatgtcac cgacgccgac gggatcagcg cgtccaggtg gactacccag
     6901 tactcgtatc tggaggagga ggcgttcgcc agcctggacc ccgtcaccgg accgagggcg
     6961 ccgggctcgg tccttcccgg gatgatcatg tacacggcgc tcgcctaccc cgatcccgag
     7021 ggccgcaaca cggtgctggt gctgaacgag gggggcaacc ggttcgagcc ggcgagcatc
     7081 accatcaccg tcggcgacac gatcaactgg ttctggccgg tcggcagcgc cggacacaac
     7141 gtcgtgccgg acgacggcaa cgcgccaccg acctcgggag ccccggccgg ctaccccaag
     7201 ttcctcagct tcatcttcgc ggtgccgggt gtctaccact accactgcgc ggtccacggc
     7261 gggcccggtg gcgtgggcat gtcggggacg gtgacggtcg tgccgcgaac tacgcaggac
     7321 tgagggcacc catcagcgcc agcaccgcgc gctccttcgc cttcgcttcg acatcgaccg
     7381 tcatcgcccg tcccagccag gcgtccggaa aatccttcgg gtcgatgtag tccgcgtggg
     7441 gacgcgggtt ggaggcgccc cagccctccc gcggcgacga gatgtgggtc cacggctcgc
     7501 gcccatccca tgtcgccgcc gccagctcgg tggcttcctc caccgggagg ccgtcgccgt
     7561 ggcaccggtg gtggtgcgca tcgtacacca gcggcactcc cgccctccga cacagcggca
     7621 gaagatccgc cggggtgaac cgatggtcgt cgttctccag cgccacccgc cgtcgcgccg
     7681 ccgggctcag caggtccagc ccccggtcca gccggtcgac cgcggcaacc gttcccccgg
     7741 ccgagctccc gccgtggaag accaccgtgt cggcgccgac cagcgcggcg atgccggact
     7801 ggaactccag ctcctccgcc gaggagcgca ccacctcggc gcgctcggag ttgagcacca
     7861 cgaactgatc ggggtggagg ctgagccgga tgtcgtggtc ccgcgcgagc cgtcccgccc
     7921 gctcgaaggc ggcccggatg tcgcctctcc ggtccagcgc ctcgaggacg tacccgctgg
     7981 tgggatgcgt gcccagcggc aggatctggc tgttgatgcg gaatgccccg atgcccagct
     8041 cggcgcagcg cacgaccgcg gcggcgagcg cggcggcgtt gtccgcggcg atggccgcca
     8101 gatacctcag ccgctcggcg ggcgtgagcc ccgagacgta gcgatgcgtc gcggtgcgga
     8161 agcggatcgg cgagtcgagg aactgacagc agagtccgaa gcggagggcg gaagggctga
     8221 tggacgcctc gtggccgggt tacaggatcc gcacgatcca gtcgcccagc acgtagccga
     8281 cgaccgctac gcccaggccg accagaaaca tgtccatccc gctgcgcagc aggccgcggc
     8341 cggtgaacac gctgcgggcc gcaccgacgc cgaagtggga gagcatcgcg acggcgaacg
     8401 aggtccagat ggcccagggg ctggtgctca ccaagagcgg caccacgggg atcaaggcgc
     8461 cgagggcggt ggcggtgccg gtcacccagg cctcgcgcat cggggtgctg ctcgcctcgc
     8521 cgatccggag ctcctcccgc accttctcac ccagcgcccg ctccggatcg ctcatgagct
     8581 gggtggccag cgcgtcggcc tgcgcggccg gaatcccctt ggcctgatag aggaggctca
     8641 gctcctcccg ctccagatcg ggcatgaggc ggatctcctc ccgctccatc gcgatctcgt
     8701 gctcgaagac ctcccgctcg ctcttggcgg ccaggtagcc cgacgcgccc atggagaggg
     8761 cgtcggccat ggcgccggcc aggcccgcga cgacgacggt gtggcccgcg atctccatgc
     8821 tgccctgggc cccgatcatc cccgccacca ggccgaagtt ggccgtgagc ccgtcgttga
     8881 acccgtaaac cacgttccgg aggaatccgc cggcgccggt gcggtgccag ggctctcccg
     8941 cccggccgct cagggttgcc agcgtctggg cgtgctcctt ggattcctgg gccaatcgga
     9001 gggcggtgga gcccaccggg ccgtcgggtg tg
//
LOCUS       DASUYN010000118         2418 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_257529, whole genome shotgun sequence.
ACCESSION   DASUYN010000118 DASUYN010000000
VERSION     DASUYN010000118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2418)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2418)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2418
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_257529"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..439)
                     /locus_tag="VF061_02275"
     CDS             complement(<1..439)
                     /locus_tag="VF061_02275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent transcriptional regulator"
                     /protein_id="HEX6668353.1"
                     /translation="MHAAIQHETLTRSVEDYLKAIYRLSPQGRPAATSEIAQRLELSP
                     ASVSGMVKRLSEQGLLEHVPYKGVQLTPEGRRAALRMLRRHRLIEAYLVAFLGYSWDT
                     VHDEAERLEHAVSDALVDRMAAVLGHPTVDPHGDPIPTSEGDIL"
     gene            complement(507..1025)
                     /locus_tag="VF061_02280"
     CDS             complement(507..1025)
                     /locus_tag="VF061_02280"
                     /EC_number="3.6.1.55"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005777 - peroxisome [Evidence IEA];
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003986 - acetyl-CoA hydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0008413 - 8-oxo-7,8-dihydroguanosine
                     triphosphate pyrophosphatase activity [Evidence IEA];
                     GO_function: GO:0010945 - coenzyme A diphosphatase
                     activity [Evidence IEA];
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_function: GO:0035539 - 8-oxo-7,8-dihydrodeoxyguanosine
                     triphosphate pyrophosphatase activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0009132 - nucleoside diphosphate metabolic
                     process [Evidence IEA];
                     GO_process: GO:0015938 - coenzyme A catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA pyrophosphatase"
                     /protein_id="HEX6668354.1"
                     /translation="MDEQGDPLLWAAVAVILTPDPDALLLIRRADRVGDPWSGHMALP
                     GGRQDPSEPDLFTTAVRETAEEVGLSLGRQHLIGTLDDVVPRTPVLPPIAVRPHVFAL
                     THRPLLSLNPEVAAAQWVPLDRLLHPDTYDSVRLDLRGETRVFPAFRLDDSLVWGLTE
                     RILSSLLLHLRD"
     gene            complement(1076..1303)
                     /locus_tag="VF061_02285"
     CDS             complement(1076..1303)
                     /locus_tag="VF061_02285"
                     /inference="COORDINATES: protein motif:HMM:TIGR02605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HEX6668355.1"
                     /translation="MPIYTFRCNACHAEFDQLVRSDTRVACPSCQSRKLERLMSLTAR
                     PATGGKQTDLSRLGPPPGGGCCGGGCHNHSH"
     gene            complement(1356..2204)
                     /locus_tag="VF061_02290"
     CDS             complement(1356..2204)
                     /locus_tag="VF061_02290"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX6668356.1"
                     /translation="MATPTLTSHRLPGALGELLIDVRAGGRDSPRPAIVVVHGWKGFK
                     NWGMFPPLAERLARAGFATITFNLSGSGVDDRGEMAWPERFARDTFSSEVQDLGTVLD
                     ALARGELGVAAPSSVGLVGHSRGGGVAVLHAAGDPRVRALVTWAAISSVERWSPHAVA
                     EWRRTGELEVVNARTGQRFGLTTEILEDVERNAVGSLDILGAATRVAIPWLIVHGSED
                     EAVSSVEAEALRAASPLSTTRLLAIDGAGHTFGAGHPWDPKVHDTPALRRVFDMTLAW
                     FAAHLG"
BASE COUNT          402 a          807 c          870 g          339 t
ORIGIN      
        1 cgaggatgtc gccctcggag gttggaatcg gatccccgtg gggatccacc gtggggtggc
       61 ccagcaccgc ggccattcga tccaccaggg catccgagac cgcgtgctcg aggcgctcgg
      121 cctcgtcgtg caccgtgtcc cagctgtagc ccaggaaggc gacgagatag gcctcgatga
      181 ggcgatggcg ccggagcatc cgcagcgcgg cccgacgacc ctccggcgtg agctggacgc
      241 ccttgtaggg cacgtgttcc agcagaccct gctcggagag gcgcttcacc attccgctca
      301 cggaggcggg ggacagctcc agccgctggg cgatctcgct cgtcgcggcg gggcgtccct
      361 gaggggaaag cctgtagatg gccttgagat agtcctcgac cgaccgggtg agcgtctcat
      421 gctgaatggc tgcgtgcata cgaaacctga aattaggtgt gcctaaatct taggtaagtg
      481 aagtcctatg tcaagattag gaagcgctag tcgcgaagat ggagcagcag gctggacagg
      541 atccgctcag tcaggcccca gacgagcgag tcgtccaagc gaaaggcggg gaacacacgg
      601 gtctctcccc ggaggtccag ccggaccgag tcgtaggtgt cgggatggag cagacggtcg
      661 agcggaaccc attgggccgc ggcgacttcg gggttgagag acaggagggg tcggtgggtc
      721 agcgcgaaga cgtggggccg gacggcgatg ggtggcagaa ccggcgtccg gggcaccacg
      781 tcgtcgagcg tgccgatgag atgctggcgc ccgagcgaga gcccgacctc ctcggcggtc
      841 tcgcgtacgg cggtcgtgaa cagatccggc tccgaagggt cctggcgacc acccggaagg
      901 gccatatggc cggaccacgg gtcgccgacc cggtccgcgc ggcggatcag gaggagggca
      961 tcgggatcgg gggtaaggat gacggcgaca gccgcccaga gcagcggatc accctgctcg
     1021 tccatcgagg ggcggtggcc ggccaggcgc tcccgaaggc ggtcgaggcg tgcgctcagt
     1081 ggctgtggtt gtggcaaccg ccgccgcagc atcccccgcc gggcggcggg cccagccggc
     1141 tcaggtcggt ctgcttccca cccgtggccg gccgcgcggt gagcgacatg agccgctcga
     1201 gcttccggct ctgacaactg gggcacgcca ccctggtgtc gctccgtacg agctgatcga
     1261 actcggcgtg acaggcattg cagcgaaacg tatagatggg catggaggga gattggcggt
     1321 tgcggcggtc gtggtcaagc gcgcccgggg acctctcacc ccaggtgcgc ggcgaaccag
     1381 gccaacgtca tgtcgaacac gcgtcgcagc gcgggtgtgt cgtgcacctt cgggtcccac
     1441 gggtggccgg caccgaacgt gtggcccgcg ccgtcgatcg cgagcagccg ggtggtgctc
     1501 agcgggctcg ccgcgcggag cgcctcggcc tccaccgacg acaccgcctc gtcttcgctt
     1561 ccgtgcacga tcagccaggg gatggccacc cgggtcgccg caccgaggat gtcgagcgac
     1621 ccgacggcgt tccgctcgac gtcctccagg atctcggtcg tgagtccgaa ccgctggccg
     1681 gtgcgggcgt tcactacctc cagctcgccg gtgcgccgcc actccgcgac cgcgtgcggg
     1741 gaccagcgct cgacgctcga gatcgcggcc caggtgacca gcgcccggac ccgcgggtcg
     1801 ccggccgcgt ggagcacggc gacgcctcca ccccgggaat ggcctaccag gccgaccgaa
     1861 gacggcgcgg cgacccccag ctctccgcgc gccagcgcgt cgagcaccgt gccgaggtcc
     1921 tgaacctccg aggaaaacgt gtctcgagcg aatcgctcag gccacgccat ctcgccgcga
     1981 tcgtccaccc cactgccgct caggttgaag gtgatggtcg cgaagccggc ccgagccagc
     2041 cgctcggcca ggggcgggaa catcccccaa ttcttgaagc ccttccaacc gtgaaccacc
     2101 acgatggcgg ggcgcggtga gtcgcggccg cccgctcgca cgtcgatcag cagctcgccc
     2161 agggcgccgg gcagacggtg ggaagtcagg gttggtgtcg ccatcgtctc agtataaacc
     2221 gacaggatcc ggccggtccc gcacggcggg ctcagctcac cgcgggctcc aggaggtcca
     2281 cctcgccggc atcggcatcg agtcgggcac ggacgccgag gggaagggtc cactggtcat
     2341 cgatgtgacc gaccggaaac ccgcaggcca ccgggatccc gagcggtagc aggtacgtcg
     2401 cgaggacctc gtcgaatc
//
LOCUS       DASUYN010000119         2465 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1801005, whole genome shotgun sequence.
ACCESSION   DASUYN010000119 DASUYN010000000
VERSION     DASUYN010000119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2465)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2465)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2465
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1801005"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(9..2258)
                     /locus_tag="VF061_02295"
     CDS             complement(9..2258)
                     /locus_tag="VF061_02295"
                     /inference="COORDINATES: protein motif:HMM:NF022113.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LpqB family beta-propeller domain-containing
                     protein"
                     /protein_id="HEX6668357.1"
                     /translation="MTLSPPPPVRVPRLPRHLGPIGRLIPAVALVLGLVMPARAQTVA
                     EVQVTPETLTLAVGGRQTLFATAFDRQGNLIPNARFTFWSSDTTVAKVSRDGAVMGIG
                     PGLAKVEARVQGLQASTAILITGPGAAGDTAGDTPPRGTTVLTLVPASATLLPGESLP
                     LEARPVREDGSPAPAGRVSWKSLHPEVAAVDSNGLVITLSPGRTIVQATAAGGLMATA
                     AVEVAAAEIALAEGRLILGPGEADTLHVLVPGQGNRELRGGIQWRTSDTGVVRVGPTG
                     IVSARVPGRAEVVATGYGQERRAAVLVHREPSTLVVTPRPAAGAIQLPVRATRRVVVV
                     AEADDSTPIPEARVRWEVGDTAIIAYDITKGELTGRALGTSTLTARLYGFDPVVWAVQ
                     VIPGVLGLDRRRVGIGMGQRDSLRAVLLDENGKPQGAPSELTWSVSAPEVLQVSEGGV
                     IDGLRPGHATVTAAAPWGKSVTADVFVVADLFLSSNRGGTPGIYQLRSTVADTLRPVL
                     ADRSASIQPALSPDRTRIAFSSNREGSYDLYLMDADGSSMRRLTTDPGAEGEPAWTPD
                     GSRLVYTATPQGGKPQLFVLRPDGRPAQALTDEPGGNHSPAISPDGRTIAFVSTRDGN
                     QEIYLMPVEGGGAPRRLTRTGQRESQPRFLPSGDLIYAVERGRGSRLVRLAGGDGEPQ
                     EVLETDEPIGGLAVSRDGRRVAYVVGRITDAARGRAQFRLFVRPLAADATPAQVTLRP
                     GEHVLSPAF"
BASE COUNT          345 a          851 c          922 g          347 t
ORIGIN      
        1 gatcgatctc agaatgccgg gctcaggacg tgctcacccg gtcgcagtgt gacctgggcc
       61 ggcgtcgcat cggcggccag cggccgcacg aagaggcgga actgcgcccg gccgcgcgcg
      121 gcgtcggtga tccgcccgac cacgtacgcc acccggcgcc cgtcgcggga gaccgccagg
      181 cccccgatcg gctcatccgt ctccagcacc tcctgcggct ccccgtcgcc accggccagg
      241 cggaccaggc gagatccccg gcctcgctcc acggcgtaga tcaggtcgcc gctggggagg
      301 aaccgcggct gcgactcccg ctgacccgtg cgggtaagcc gtcgtggggc gccgccgccc
      361 tccaccggca tcaagtagat ctcctgattc ccgtcccggg tcgagacgaa cgcgatggtg
      421 cgtccgtccg gggagatggc cggcgagtgg ttgccgcccg gctcgtcggt gagtgcctgg
      481 gccggcctgc cgtcgggccg caggacgaac agctggggct tcccgccctg aggggtcgcg
      541 gtgtagacca gtcggctgcc gtcgggggtc caggccggct ctccctccgc gccggggtcg
      601 gtggtgagtc gccgcatgct gctgccgtcc gcgtccatga gatagagatc gtagctcccc
      661 tcgcgattgg agctgaaggc gatcctggtg cggtcggggg atagcgcggg ctggatgctg
      721 gcggagcggt cggcgaggac ggggcggagg gtgtcggcga ccgtgctgcg aagctgatag
      781 atgcccgggg tccctccgcg attggacgag aggaacaggt ccgcgacgac gaacacgtcc
      841 gcggtcacgc tcttgcccca gggggcggcg gcggtgacgg tcgcgtgccc cggccgcagg
      901 ccgtcgatga cgccgccctc cgagacctga aggacttccg gcgcactgac gctccaggtc
      961 aattcggacg gcgcgccctg tggcttgccg ttctcgtcga ggagaacggc gcggagtgag
     1021 tcgcgctggc ccatcccgat gccgacccgg cggcggtcga ggccgaggac tccgggaatg
     1081 acctgcaccg cccagacgac ggggtcgaat ccgtagagcc gggcagtgag ggtggaggta
     1141 ccgagcgccc ggccggtgag ctcgcccttg gtgatgtcat aggcgatgat cgccgtgtcg
     1201 cccacctccc accggacgcg cgcctcagga atgggcgtgg aatcgtcggc ctccgccacc
     1261 acgaccaccc gccgggtggc ccgcaccggc agctggatgg ccccggccgc cggccgcggc
     1321 gtgaccacga gcgtgctggg ttcccggtgc accagtacgg cggcccgccg ctcctggccg
     1381 tagcccgtcg cgaccacctc ggctcggccc ggcaccctgg cgctgacgat ccccgtcgga
     1441 cccacccgca cgacgccggt gtcgctcgtc cgccactgga tgccgccgcg aagctcgcgg
     1501 ttcccctgac ccgggaccag cacatggaga gtgtcggcct cgccgggtcc aaggatcagc
     1561 cggccctcgg cgagggcgat ctccgcggct gccacctcga ccgcggcggt ggccatgagc
     1621 ccgccggcgg cggtggcctg gacgatggtg cgcccggggg agagcgtgat caccaggccg
     1681 ttggagtcca ccgccgcgac ttcggggtgc agggacttcc agctcacccg gccggccggc
     1741 gccggactgc cgtcctcccg caccgggcgc gcctccagcg ggagactttc tcccggaagc
     1801 agcgtggcgg aggcgggcac caaggtgaga acggtggtcc cccgcggcgg ggtgtcccct
     1861 gcggtgtcgc cggcggcgcc cgggcccgtg atcaggatcg cggtcgaggc ctggagaccc
     1921 tggacccggg cttccacttt cgccaggccc ggcccgatac ccatgaccgc gccgtccctg
     1981 ctgaccttgg cgacggtcgt atccgagctc cagaaggtga agcgggcgtt agggatcaga
     2041 ttcccctggc ggtcgaaggc ggtggcgaag agcgtctgcc ggccgccgac ggccagggtg
     2101 agcgtttcgg gggtgacctg gacctcggcc acggtctggg cccgcgccgg catcaccagt
     2161 cccaggacca gggctaccgc gggaatgagc cggccgatcg ggccgaggtg ccggggcagg
     2221 cgtgggaccc gcaccggcgg agggggagac aatgtcaccg ggtgaatgcg tccgggatga
     2281 ggtcggagat ggcgtaagta tagcgcgaca gcgtcaggct tgcagaagga ttcaagatgt
     2341 gcaagttatt aactcgaccg tgagcagggc gccgatggcg cctcgcgacc ggcggcgggt
     2401 tgcgccgcat ctcgttcgga aggagcgaag atggccgacc ttcattatat ggagatgggc
     2461 tggtc
//
LOCUS       DASUYN010000120         2226 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_258605, whole genome shotgun sequence.
ACCESSION   DASUYN010000120 DASUYN010000000
VERSION     DASUYN010000120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2226)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2226)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2226
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_258605"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..522
                     /locus_tag="VF061_02300"
     CDS             <1..522
                     /locus_tag="VF061_02300"
                     /inference="COORDINATES: protein motif:HMM:TIGR00768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RimK family alpha-L-glutamate ligase"
                     /protein_id="HEX6668358.1"
                     /translation="PDTVVCEDPDEAMAAFRQLGDVIVKPLFGSMGLGMVRVTDEEMA
                     YRVFRTVETIRGVYYLQRTIDHDGRDYRVFVIGDRVLGAIERRAKGWRTNISRGGQPL
                     VARLPDPWAALAVRAAAVVGAEYAGVDLLQARDGTTYVIEVNGIPGWQGLQEATGIDV
                     AGALVDYLARRGP"
     gene            519..1364
                     /locus_tag="VF061_02305"
     CDS             519..1364
                     /locus_tag="VF061_02305"
                     /inference="COORDINATES: protein motif:HMM:NF013991.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triphosphoribosyl-dephospho-CoA synthase"
                     /protein_id="HEX6668359.1"
                     /translation="MTGEEIAAAAQLACLLEVSALKPGNVSPEHHFHDTRDEDFLASA
                     VAIGPALARAGERPLGATIRTAVEATARWTKANTNLGIVLLLAPLARAAARSGGDLRG
                     RLGAVLEETTVADAAETYAAIRRVRPGGLGTSSAEDVSRAPTVTLREAMALAAERDAI
                     AREYVTDFALTLEVGAPALVDARGRGLSWSDATVECFLALLAVAPDTHVARKLGRAEA
                     ERLSARAREVVAAGGTGTAEGRAALTALDAELRDSRNSRNPGTTADLTCAALFVVILE
                     GGWDR"
     gene            1378..1881
                     /locus_tag="VF061_02310"
     CDS             1378..1881
                     /locus_tag="VF061_02310"
                     /EC_number="4.1.2.50"
                     /inference="COORDINATES: protein motif:HMM:NF013411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070497 -
                     6-carboxy-5,6,7,8-tetrahydropterin synthase activity
                     [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase"
                     /protein_id="HEX6668360.1"
                     /translation="MSSSFRVQVSKDYLVFASAHFITFRGHQCETLHGHNYRVGVAVE
                     GTVEPETLFVLDFSVLKQITRRLVDEIDHKVLLPQQNPKLAFREEGSRLAVDYFGEPT
                     YVFPRADCALLPIPNTTAEMLAQYLGGRVRDELARSGHRHLTQLEMEVEENYGQSATW
                     RETLALD"
     gene            complement(1836..>2226)
                     /locus_tag="VF061_02315"
     CDS             complement(1836..>2226)
                     /locus_tag="VF061_02315"
                     /inference="COORDINATES: protein motif:HMM:NF013168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HisA/HisF-related TIM barrel protein"
                     /protein_id="HEX6668361.1"
                     /translation="SVGPGRVIFSLDLRLGRPMLSREAERSDLRGLAAEELAARAVAA
                     GVGSVLALDVGRVGTGGGVDLDLLRRLRRRMPSVRLLAGGGVADAEDLERLAGAGCDA
                     VLVATALHSGRLRQSSARVSRQVADCP"
BASE COUNT          327 a          801 c          796 g          302 t
ORIGIN      
        1 cccgacacgg tggtgtgcga ggatcccgac gaagcgatgg cggcgttccg gcagctgggc
       61 gacgtgatcg tgaagccgct gttcggctcg atggggctgg ggatggtacg tgtgaccgac
      121 gaagagatgg cctaccgcgt cttccgcacg gtggagacca tccggggcgt gtactacctc
      181 cagcgcacca tcgaccacga tggccgggac taccgcgtct tcgtgatcgg cgaccgggtg
      241 ctcggcgcca tcgagcgacg ggccaaaggg tggcgcacga acatctcgcg cggcggacag
      301 ccgttggtgg cgcggctgcc ggacccctgg gcggcgctcg ccgtgcgcgc ggccgccgtg
      361 gtcggcgccg agtatgccgg ggtggacctg ctccaggcgc gcgatgggac cacgtacgtc
      421 atcgaggtca acggcatccc cggctggcag gggctccagg aggccaccgg catcgacgtc
      481 gctggcgccc tggtggacta cctcgcccgg cggggaccgt gaccggcgag gagatcgcag
      541 ccgcggcgca gctcgcctgc ctgctggaag tcagcgccct caagccaggc aacgtctcgc
      601 ccgagcacca ctttcatgac acgcgggacg aggacttcct ggccagcgcc gtggcgatcg
      661 gcccggcgct ggcccgggcc ggggagcgcc cgctcggcgc caccatcagg acggcggtgg
      721 aggccacggc gcgctggacc aaggcgaaca ccaaccttgg gatcgtgctg ctcctggcgc
      781 cgctcgcccg ggcggcggct cgctccggcg gggatctgcg gggccgactc ggcgccgtgc
      841 tcgaggagac taccgttgcc gacgccgcgg agacctatgc ggccatccgc cgcgtgcgtc
      901 ccggcggcct gggaacctca agcgccgagg atgtctcccg cgcgccgacc gtgacgctgc
      961 gcgaggcgat ggcgctcgcg gccgaacgcg acgcgatcgc gcgggagtac gtcacggact
     1021 tcgcactcac cctcgaggtg ggagctccgg ccctggtgga tgccaggggg cgcggtctca
     1081 gctggtccga cgccacggtg gaatgcttcc tggcgctcct ggccgtggcc cctgataccc
     1141 acgtggcgcg gaagctcggc cgcgcggagg ccgagcggct ctcggcccgg gcgcgtgagg
     1201 tcgtggcggc cggcggtacc ggaaccgccg agggccgcgc ggcgctcacc gccctcgacg
     1261 cagagctccg ggattcccgg aactcgcgca atcccggcac caccgcggac ctgacctgtg
     1321 ccgcgttgtt cgtcgttata cttgagggtg gatgggaccg ctgacgagag gagtgccgtg
     1381 tcgagcagct tccgggtgca ggtgagcaag gactacctgg tcttcgcctc cgcgcacttc
     1441 atcaccttcc gcggccacca gtgtgagaca ctccacggac acaactaccg ggtcggcgtt
     1501 gcggtcgagg gtacggtgga gccggaaacc ctcttcgtcc tcgacttcag tgtgctgaag
     1561 cagatcaccc gcaggctggt ggacgagatc gaccacaagg tgctgctgcc gcagcagaac
     1621 ccgaagctcg ccttccggga ggagggctcc cggctcgcgg tggactactt cggcgagccg
     1681 acctacgtct tcccccgcgc cgattgtgcc ctgcttccca ttcccaacac caccgccgag
     1741 atgctggctc agtacctggg cggccgggtc cgcgacgagc tggcccgctc gggccaccgg
     1801 cacctgacgc agctggagat ggaggtggag gagaactacg ggcagtccgc cacttggcgg
     1861 gagaccctgg cgctggactg acggagccgc ccgctgtgga gcgcggtcgc caccagcacc
     1921 gcgtcgcacc cggcgcccgc cagccgctcc aggtcctcgg catccgccac gccgccgccg
     1981 gcgagaagcc gcaccgaggg catccgccgg cgaagacgcc gcagcaggtc gagatccacg
     2041 ccgccgccgg tcccgaccct ccccacatcc agcgcgagca cggaacccac gcccgccgcg
     2101 accgcgcggg cggccagctc ctccgccgcg agcccgcgaa ggtcgctcct ctcggcttcg
     2161 cgtgacagca tcggacggcc caggcggaga tcgagactga agattacccg cccggggccg
     2221 acgctc
//
LOCUS       DASUYN010000121         3739 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_258747, whole genome shotgun sequence.
ACCESSION   DASUYN010000121 DASUYN010000000
VERSION     DASUYN010000121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3739
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_258747"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            330..953
                     /locus_tag="VF061_02320"
     CDS             330..953
                     /locus_tag="VF061_02320"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HEX6668362.1"
                     /translation="MSLPTEPILPESAERDPQAPDVLRVLLDNHARFLGFLERRVGSR
                     DEAEDILQEAFVRSLGRTDALRSAESAMAWFYRVLRNALIDHHRREGTRARAFLQLAA
                     EAEEGTLAPDDELEAVACACISALVDTLKPEYGTALRRVDLDGLSVRGFAEEAGITPG
                     NAGVRLHRAREALRRQLARSCGTCLTHGCLDCRCGQPATGGEPARSV"
     gene            complement(945..1397)
                     /locus_tag="VF061_02325"
     CDS             complement(945..1397)
                     /locus_tag="VF061_02325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012827968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal-responsive transcriptional
                     regulator"
                     /protein_id="HEX6668363.1"
                     /translation="MTAIASLTIGAVARRARVPLDTIRYYERRGLLPPPPRSSGGYRQ
                     YSTDAVRRVTFIKRAQALGFTLEEIAELLDLRITPGGTCDAVERRARAAMDRIETKLG
                     ELTRMREAIARLVAACRSAHPPDECPMLTALDEDASGDQTTSSVNGSD"
     gene            complement(1409..2074)
                     /gene="merB"
                     /locus_tag="VF061_02330"
     CDS             complement(1409..2074)
                     /gene="merB"
                     /locus_tag="VF061_02330"
                     /EC_number="4.99.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF015216.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018836 - alkylmercury lyase activity
                     [Evidence IEA];
                     GO_process: GO:0046413 - organomercury catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="organomercurial lyase"
                     /protein_id="HEX6668364.1"
                     /translation="MRRLELPDAALELLARALARALPCTDRVSVSVLGVLATGYPVSR
                     HDLAARLARGRPRGGEDTAEAFLHAAIERIPNLELAEDGRIVGCGLTLAPTDHQIIFS
                     GPPLFTWCAFDTMLFPALLGRSAEVRSRCHATGVPIRCSVGLNGLDVLVPAAAVISLV
                     PPGQGDGHREAGGGFCRHAHFFASPAAAGRWRDAHTTAHLLPVSQAHVLARRISALRG
                     GVE"
     gene            complement(2141..3241)
                     /locus_tag="VF061_02335"
     CDS             complement(2141..3241)
                     /locus_tag="VF061_02335"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
                     /protein_id="HEX6668365.1"
                     /translation="MTHIHDTPAAGTTTLLGGLPTRGYAAASPRSPLAPFTFERRAPG
                     PKDVHIDILFCGVCHSDLHQARDEWGGSLFPMVPGHEIVGRVKEVGAEVTRFAAGDLV
                     GVGCMVDSCRHCADCREGLEQFCQNTLTLTYNSPDPILGGSTYGGYSNQIVVDQDFVL
                     RVSETLSPAASAPLLCAGITTYSPLRHWQVGPGQRVGVVGLGGLGHMGVKLARAMGAG
                     VSLFTTSPGKADDARRLGADEVIVSRDAEEMKRHSRRFDFILDTVAAPHDLDAYLTML
                     KRDGTLCLVGAPDQPHPSPAVFKLILGRRRLAGSPIGGIRETQEMLDFCAERGIVSEV
                     EVIPMERINQAYERMLKGDVKYRFVIDLATLG"
     gene            complement(3257..3715)
                     /locus_tag="VF061_02340"
     CDS             complement(3257..3715)
                     /locus_tag="VF061_02340"
                     /inference="COORDINATES: protein motif:HMM:NF024803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEX6668366.1"
                     /translation="MATQTRLPTSQGGLTVQEAAERTGLSEHTLRYYERAGLLPAVRR
                     DGSSGHRRYSADDVARISTLACLRATGMPVEQMRRYFILAARGRNAAHELRTLLQEQE
                     AALQERIRAMQGHLNYVRRKIDYWRALEAGKDAVARRIADELTSQTHTQS"
BASE COUNT          601 a         1294 c         1300 g          544 t
ORIGIN      
        1 cgcggcgcag gaggcaaggc cgccaactac gagtgcctca ctgtcgacga cgctccgccg
       61 cacagcctcg gacaaggggt gtaatggttc ccgccgtcgt gcgtcagcag gtatgaaggc
      121 cacgagacac cgggctggac aacctgcacc gaaagggaga acgacgatga ccaccacaac
      181 ctgcagcccc aactgtacct gcgggcccga ttgcccctgc gccgacaccc ccgaggcctg
      241 cgggtgcggg tgcgagtagg accccgctgc ggcgacctgc cggagatggg cgctggacca
      301 tccctggcag gccccgtatg ctaggggcga tgagcctccc gaccgagccg atcctccccg
      361 agtccgccga gcgcgaccca caggcgcccg acgtgctccg cgtgctgctc gacaaccacg
      421 cacgcttcct cggcttcctg gagcgacggg tggggtctcg cgacgaggcg gaggatatcc
      481 tgcaggaggc gttcgtccgc agtctcggcc ggaccgacgc gctccgaagc gcggagtcgg
      541 ccatggcgtg gttctaccgg gtgctccgca atgccctcat cgaccatcac cgccgtgagg
      601 ggacccgggc ccgggcattc ctgcagcttg ctgcggaggc cgaggaggga acgctcgcgc
      661 ccgacgacga gctcgaggcg gtggcctgcg cctgcatctc ggcgctggtg gacaccctaa
      721 agcccgaata cggcacggcg ctccgacggg tcgacctgga cggcctcagc gtccgcggct
      781 tcgcggaaga ggcgggcatc acgccgggca atgccggggt ccggctgcat cgcgctcgcg
      841 aagcgctccg ccgccagctt gcccgtagct gtggaacctg tctgacccac ggctgcctgg
      901 actgccgctg cgggcagccg gccaccggtg gagaacccgc ccggtcagtc tgacccattc
      961 acgctcgagg tcgtctggtc cccggaggca tcctcatcga gtgccgtcag catcgggcat
     1021 tcgtcgggcg gatgagcact ccggcaggcg gccacgagcc gggcgatggc ttcccgcatc
     1081 cgggtcagct ccccgagttt ggtctcgata cgatccatgg ccgcccgagc ccggcgctcc
     1141 accgcatcac aggtgccccc cggcgtgatt cggaggtcga gcagttcggc gatctcctcc
     1201 agcgtgaatc cgagggcctg ggcgcgcttg atgaacgtca cccgccggac ggcatcggtg
     1261 gagtactggc ggtagccccc ggagctccgg ggtggtggtg gaaggaggcc gcggcgttcg
     1321 tagtacctga tggtgtcgag tggcacccgg gcccgccggg ccacggcgcc gatcgtcagg
     1381 gaagcaatgg cagtcatgat tctggaactt actccacccc gccacgaagc gcgctgatac
     1441 ggcgggcgag gacgtgggcc tgggaaaccg ggagcaggtg ggcggtcgta tgcgcgtccc
     1501 gccacctgcc ggccgcggcc ggcgaggcga agaagtgcgc gtgccggcag aagccgccac
     1561 ccgcctcgcg gtgcccgtcc ccctggccgg gcgggaccag ggagatcacc gccgccgccg
     1621 gcaccaggac atcgagcccg ttcaacccga ccgagcaccg gatcggcacg ccggtggcgt
     1681 ggcagcgcga ccgaacctcc gcgctgcggc ccaacagtgc cggaaaaagc atggtgtcga
     1741 aggcgcacca ggtgaagagc ggcggtccgg agaagatgat ctggtggtcc gtcggtgcca
     1801 acgtcagccc acagcccacg atgcggccgt cctcggcgag ctcgaggttg gggattcgct
     1861 cgatggccgc gtggaggaat gcctctgcgg tgtcctcccc accccgcggc ctgccccgcg
     1921 cgagccgggc ggcgagatcg tgccggctga ccggatagcc ggtagccagc accccgagga
     1981 cggagacgct cacccggtcg gtacagggca atgcccgcgc gagggccctg gccaacaact
     2041 ccagggccgc gtcgggcaac tcgagccttc tcatggacag gaactctagg ccctggacct
     2101 aggtccaggg tcaagggcac cctgcagtgg agccgtggac ctagccgagc gtcgccagat
     2161 caatcacgaa tcgatacttc acgtcgccct taagcatccg ttcgtacgcc tggttgatcc
     2221 gctccatcgg gatcacctcg acctccgaga cgatcccccg ctcggcacag aagtccagca
     2281 tctcctgggt ctccctgatg ccgccgatcg gagaaccggc gagccggcgc cgcccgagga
     2341 tgagcttgaa caccgcaggc gacggatggg gttggtccgg tgcgccgacc aggcagagcg
     2401 ttccgtcccg cttgagcatc gtgagatagg catcgagatc gtgcggcgcg gcgacggtat
     2461 cgaggatgaa atcgaaccgc cggctgtggc gcttcatctc ctccgcgtcc cgggagacga
     2521 tcacttcgtc ggcgccgagc cgccgcgcat cgtctgcctt gccgggggaa gtcgtaaaga
     2581 gcgagacgcc cgcccccatc gcgcgggcga gcttgacgcc catgtggccg agcccgccca
     2641 ggccgacgac gcccacccgc tgcccgggcc ccacctgcca gtggcgaagc ggggaatacg
     2701 tcgtgattcc ggcgcaaagc aggggagccg aggcggccgg agagagcgtc tcggacacgc
     2761 gcaacacgaa atcctggtcc accacgatct ggttcgagta cccgccgtac gtggaaccgc
     2821 ccagaatggg atcggggctg ttgtaggtca gcgtgagcgt gttctgacag aactgctcga
     2881 gcccctcgcg gcagtcggcg cagtggcggc aggagtccac catgcagccg acgccgacca
     2941 ggtccccggc ggcaaaacgg gtgacctcgg ccccgacctc cttcacccgc ccgacgatct
     3001 cgtgtcccgg caccatcggg aacagggagc cgccccattc gtcgcgcgcc tgatggaggt
     3061 cggaatggca gaccccacag aacaggatgt cgatgtgcac gtccttcggg ccgggggccc
     3121 gccgctcgaa cgtgaagggc gccagcggcg agcgggggct cgcggcggcg tagcctcggg
     3181 tgggaagccc gccgagcagg gtcgtggtgc cggccgcggg cgtgtcgtga atatgtgtca
     3241 cggtaactcc tccggttcag ctctgggtat gggtctggga ggtcagctca tcggcgatcc
     3301 gccgtgccac ggcgtccttg cccgcctcga gagccctcca gtaatcgatc ttgcgacgga
     3361 catagttcag atggccctgc atcgcccgta tgcgctcctg gagcgcggcc tcctgctcct
     3421 gcaacagggt gcggagctcg tgtgccgcat ttcgccctcg cgcagccagg atgaagtacc
     3481 ggcgcatctg ctccacgggc attccggtgg cgcggagaca ggcgagggtg ctgatccggg
     3541 ccacgtcgtc ggccgagtag cgacggtgtc cgctcgaccc gtcgcggcgc acggcgggca
     3601 ggaggccggc ccgctcgtag tagcggagcg tgtgctcgct caaaccggtg cgctccgccg
     3661 cctcctgcac ggtcaggccg ccctgcgagg tgggtagccg ggtctgcgta gccatagtgg
     3721 agctgctcct tccggcatc
//
LOCUS       DASUYN010000122         4441 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_480745, whole genome shotgun sequence.
ACCESSION   DASUYN010000122 DASUYN010000000
VERSION     DASUYN010000122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4441)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4441)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4441
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_480745"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..352)
                     /locus_tag="VF061_02345"
     CDS             complement(<1..352)
                     /locus_tag="VF061_02345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668367.1"
                     /translation="MTRIGSLAVIAGLLALAGCGGGRSPEADTVAAAPQAEGASPQQI
                     DSMYRLAEGEVRRGKWGEAIKHLERVLLEFSPGDSRIPQARYWLGEAKFGTGSHLEAA
                     RVFRRVSDETPNDRL"
     gene            complement(381..1259)
                     /locus_tag="VF061_02350"
     CDS             complement(381..1259)
                     /locus_tag="VF061_02350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668368.1"
                     /translation="MTRWALAAALACAACGGATDAERRGDEAYGRGQYAEALREYRSL
                     ADGDASARIWAKLGAAALHSGDLGDAADAYLHLAGEDPGRAQEAAEGLEEVARAAERA
                     DRTEALQRAVSGLLTVAPDRVPGRYALRLAQQQGAEAAELVTLLPRAVAAAPDQAAAD
                     SLVALHARLLQETSGCGQAMFQYRAVLRRAQDAALRADARRGAADCALSLGQRSRTSG
                     RDEDAALWFAEAARMDSTSTVGRQALFAYGETRLAQGDTLAAALAFQALAAETRVSDS
                     FGGKARAMLDAIGLTP"
     gene            complement(1256..1963)
                     /locus_tag="VF061_02355"
     CDS             complement(1256..1963)
                     /locus_tag="VF061_02355"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX6668369.1"
                     /translation="MAAQTERALARARERFAVQDYYGTVHLLEEIVATGRAFADVHHL
                     LGVSLSLLGQRERALAELARALELNPRYLEALIHLGLVLAELGREVEAEDAFRRAASS
                     VSPPSNGLPSPVASRLANQHAELAEAYAEAGALERAVEQYQRALELGPTFVDLRYRKA
                     RLLLESGRSLEAREELEEVLRLRPNFLDALAALGLAHFLSGDALGARDIWKACLSRRP
                     ENARVEAYLAMLGRSGP"
     gene            complement(1947..2915)
                     /locus_tag="VF061_02360"
     CDS             complement(1947..2915)
                     /locus_tag="VF061_02360"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEX6668370.1"
                     /translation="MTRILVTGAAGFIGSHLVEALARQGDEVIGIDNFDPFYPREMKE
                     RNLAEAGPLPGFTFHELDLLDTAALQSHLTPDTVVVHLAAKAGVRPSLADPVGYARAN
                     VTGTASVAEAARRAGVSRILFGSSSSVYGDSTPAPFREDAVAIAPVSPYAATKRAGEL
                     FLRSVAPIYGFRVASLRFFTVYGPRQRPDLAIHAFARKMSAGETLTLFGDGTQARDYT
                     YCDDIIAGVLAALRWSAGAPIGVEDFNLGGNRSVPTGAMVDEIARALEITPRIEWAPM
                     QPGDVQQTAADLTKSGAILGYAPRTPFPEGIRRFVAWFRETYGRPD"
     gene            complement(2912..4222)
                     /locus_tag="VF061_02365"
     CDS             complement(2912..4222)
                     /locus_tag="VF061_02365"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose/GDP-mannose dehydrogenase family
                     protein"
                     /protein_id="HEX6668371.1"
                     /translation="MHVAVVGSGYVGLVAGACFAETGNDVVCVDKDADKIARLQRNEI
                     PIYEPGLEPMVQRNQAEGRLTFSTDLDAAVRGARVIFIAVGTPPGEDGSADLRHVLGV
                     AREIGRHMNEPKIVVTKSTVPVGTAEKVRAAVKSQTQIPFAVCSNPEFLKEGAAIEDF
                     MKPDRVVVGVDDDAAREVMAELYAPFTRQGGNRILFMDIASAEVTKYAANAMLATRIS
                     FMNQMALFCELVGADVNNVRLGIGSDQRIGRAFLYPGPGYGGSCFPKDVKAIIRTADD
                     LGLSLDVLKSVEAVNECQKLVVLNKVQRYLGADLAGKTVALWGLAFKAETDDMRESPT
                     IPLIEGLLAAGARVQVHDPKATDSARHIFEDRVMYAADPYSAAHGADALCVMTEWLVY
                     RNPDFDRVRKLLRRPLLVDGRNLYDPERLKTLGFEYHGIGRGGR"
     gene            complement(4225..>4441)
                     /locus_tag="VF061_02370"
     CDS             complement(4225..>4441)
                     /locus_tag="VF061_02370"
                     /inference="COORDINATES: protein motif:HMM:NF015665.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="UDP binding domain-containing protein"
                     /protein_id="HEX6668372.1"
                     /translation="GQGARVAYADPHVPCFSENGQEHRSVALTPQAVAAADCVMIVTD
                     HSDFDYRMVARSARAVVDTRNAMPKEA"
BASE COUNT          621 a         1641 c         1560 g          619 t
ORIGIN      
        1 cgagccggtc gttcggggtc tcgtccgaga cccggcggaa cacgcgcgcc gcctccaggt
       61 ggctcccggt gccgaacttc gcctcgccca gccagtaccg ggcctgcggg atccgggagt
      121 cgcccgggga gaactccagc agcacccgct ccaggtgctt gatcgcttcg ccccatttcc
      181 cccggcggac ttccccctcc gccagccgat acatcgaatc gatctgctgc gggctcgcgc
      241 cctcggcctg cggagcggcg gccaccgtgt cggcctcggg cgagcgcccg ccaccgcatc
      301 ccgcgagcgc gagcagacct gcgattacgg cgagggaacc gatacgggtc atgggattcc
      361 ggccccggtc gaggagcccg tcatggtgtg agtccgatgg cgtcgagcat cgcccgcgct
      421 ttcccgccga acgagtcgga gacccgggtc tcggccgcaa gcgcctggaa ggcgagggcg
      481 gcggccagcg tatcgccctg cgccaaccgg gtctcgccat aggcgaagag cgcctgccgg
      541 ccgacagtcg aggtagagtc catccgggcc gcctcggcga accagagggc cgcgtcctcg
      601 tcccgtccgc tggtccgcga ccgctgaccg agcgagagcg cgcagtcggc cgcgcccctg
      661 cgcgcgtcgg cgcgcaacgc ggcgtcctgg gcccgacgca gcacggcgcg gtactggaac
      721 atcgcctggc cgcacccgga ggtctcctgc agcagccgcg catgcagggc gacgagcgag
      781 tccgcggccg cctggtccgg cgccgcggcg accgcgcgcg ggagcagcgt gaccagctcg
      841 gcggcctcgg ccccttgctg ctgcgccagc cggagcgcat accgtcccgg tacccggtcc
      901 ggcgccacgg tcaggagccc gctgacggcc cgctgcaggg cttccgtccg atcggcgcgc
      961 tcggcggcgc gggccacctc ctccaggccc tcggcggctt cctgcgcccg acccggatcc
     1021 tcaccggcca gatgcaggta ggcgtcggcg gcgtcgccga ggtcgccgct gtggagggcg
     1081 gcggcgccca gcttggccca gatcctggcc gaggcgtccc cgtcggccag tgagcggtac
     1141 tcccgcagcg cctccgcgta ctggccccgg ccgtaggcct cgtcgccccg gcgctcggcg
     1201 tcggtcgcgc cgccgcaggc ggcgcaggcc agcgcggcgg cgagggccca tcgcgtcacg
     1261 ggccgctgcg tccgagcatc gccaggtagg cctcgacccg ggcgttctcg ggccggcggg
     1321 agagacatgc cttccagatg tcccgcgcgc ccagcgcgtc gccggagaga aagtgcgcca
     1381 gccccagcgc ggccagcgcg tcgaggaagt tggggcgcag gcgaagcacc tcctccagct
     1441 cttcccgcgc ctcgagcgag cgccccgatt ccaggaggag cctcgccttg cggtagcgca
     1501 ggtccacgaa ggtcggtccc agctcgaggg cccgctggta ctgctcgacc gcgcgctcca
     1561 gcgctcccgc ctccgcatag gcctccgcca gctcggcgtg ctgattggcg agccgcgacg
     1621 ccaccggtga gggcaggcca ttggacggag gcgagacgct cgaggcggcc cggcggaacg
     1681 cgtcctccgc ctccacctcg cgcccgagct ccgcgagcac caggccgagg tggatcaggg
     1741 cctccagata gcgcgggttc agctccaggg cgcgggccag ctccgccagc gcccgttccc
     1801 gctggcccag gagcgagagc gagacgccga gcaggtggtg cacgtcggcg aacgcgcggc
     1861 cggtggcgac gatctcctcc agcaggtgca cggtgccgta gtagtcctgg accgcgaacc
     1921 gctcgcgggc ccgggccagc gcccgctcag tctgggcggc cataggtctc ccggaaccag
     1981 gcgacgaatc gccggattcc ctccggaaag ggtgtgcgcg gcgcgtagcc gaggatcgca
     2041 cccgacttgg tcaggtcggc ggccgtctgc tgtacgtcgc cgggctgcat cggggcccac
     2101 tcgatccggg gcgtgatctc gagcgcacgg gcgatctcgt ccaccatcgc cccggtcggc
     2161 accgagcggt tgccccccag gttgaagtct tccaccccga tcggcgcgcc ggcggaccag
     2221 cgcagcgccg cgagcacgcc ggcgatgatg tcgtcgcagt aggtgtagtc gcgcgcctgg
     2281 gtgccgtcgc cgaacagcgt gagggtctcc cccgccgaca tcttgcgggc gaacgcgtgg
     2341 atcgccagat cggggcgctg ccgcggcccg tacacggtga agaagcggag cgaggccacc
     2401 cggaacccgt agatcggcgc gaccgagcgg aggaacagct ctcccgcccg cttggtggcg
     2461 gcgtagggcg acaccggggc gatcgccacc gcgtcctcgc ggaacggcgc cggcgtgctg
     2521 tccccgtaga ccgatgagga cgagccgaac aggatccgcg acacgcccgc ccgtcgcgcc
     2581 gcctccgcca ccgacgcagt cccggtgacg ttggcccgcg cgtagcccac cgggtccgcc
     2641 agcgaggggc gaacgcccgc cttcgcggcc agatggacca ccaccgtatc cggcgtaagg
     2701 tgcgactgga gcgcggcggt gtcgagcagg tccagctcgt ggaaggtgaa gccggggagc
     2761 ggcccggcct cggccaggtt ccgctccttc atctcgcggg ggtagaaggg atcgaagttg
     2821 tcgatcccga tcacttcgtc gccctggcgg gccagcgcct cgaccaggtg cgacccgatg
     2881 aacccggccg caccggtgac gaggattcgg gtcaccggcc gccccggccg atcccgtgat
     2941 actcgaagcc gagggtcttc agccgttcgg gatcgtacag gttacggccg tccaccagca
     3001 gggggcggcg gagcagcttg cggacacggt cgaagtcggg gttgcggtag accagccact
     3061 cggtcatcac acagagggcg tccgcgccgt gcgccgcgct gtagggatcg gcggcgtaca
     3121 tcacccggtc ctcgaagatg tgccgcgccg aatcggtggc cttggggtcg tggacctgca
     3181 cccgcgcgcc ggccgccagc agcccctcga tcagcgggat ggtcgggctc tcccgcatgt
     3241 cgtccgtctc cgccttgaac gccagccccc agagggccac ggtcttcccg gcgaggtcgg
     3301 cgccgagata gcgctgcacc ttgttcagca ccaccagctt ctgacattcg ttcacggcct
     3361 cgaccgactt gagcacgtcg agcgagaggc cgaggtcgtc ggcggtgcgg atgatggcct
     3421 tcacgtcctt ggggaagcag gagccgccgt agccggggcc gggatagagg aaggcgcggc
     3481 cgatccgctg gtccgagccg atgccgagcc ggacgttgtt cacgtcggcg cccaccagct
     3541 cgcagaagag cgccatctgg ttcatgaagg agatccgggt ggccagcatc gcgttggcgg
     3601 cgtacttggt gacctcggcc gacgcgatgt ccatgaacag gatgcggttg ccgccctggc
     3661 gggtgaacgg ggcgtacagc tcggccatca cctcccgcgc cgcgtcgtcg tccacgccca
     3721 ccacgacccg gtccggcttc atgaaatcct cgatcgcggc cccctccttg aggaactcgg
     3781 ggttggagca caccgcgaac ggaatctggg tttgggactt caccgcggcg cgcaccttct
     3841 ccgccgtccc caccggcacc gtggacttgg tgaccacgat cttgggctcg ttcatgtggc
     3901 ggccgatctc ccgcgccacc cccagcacgt gccgcaggtc ggccgagccg tcctcgcccg
     3961 gcggggtgcc caccgcgatg aagatcaccc tggctccgcg caccgcggcg tcgagatcgg
     4021 tggagaacgt cagacggccc tcggcctggt tgcgctgcac catcggctcg agccccggct
     4081 cgtagatcgg gatctcgttg cgctggagcc gcgcgatctt gtccgcgtcc ttgtccacgc
     4141 agacgacgtc gttgccggtc tcggcgaagc aggcgccggc caccagaccc acgtatccgc
     4201 ttcccaccac cgccacgtgc attctcaggc ctctttcggc attgcgtttc gggtatccac
     4261 caccgcccgg gcactgcggg cgaccatgcg gtaatcgaag tccgagtggt cggtcacgat
     4321 catcacgcag tcggccgccg ccacggcctg cggggtgagc gccaccgagc gatgctcctg
     4381 cccgttctcg gagaagcagg gcacgtgggg atcggcgtac gccacccgcg ccccctggcc
     4441 c
//
LOCUS       DASUYN010000123         2138 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1141528, whole genome shotgun sequence.
ACCESSION   DASUYN010000123 DASUYN010000000
VERSION     DASUYN010000123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2138)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2138)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2138
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1141528"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1536
                     /gene="boxC"
                     /locus_tag="VF061_02375"
     CDS             <1..1536
                     /gene="boxC"
                     /locus_tag="VF061_02375"
                     /EC_number="4.1.2.44"
                     /inference="COORDINATES: protein motif:HMM:TIGR03222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_process: GO:0010128 - benzoate catabolic process via
                     CoA ligation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-epoxybenzoyl-CoA dihydrolase"
                     /protein_id="HEX6668373.1"
                     /translation="LKMNSYDLGVDIELHDAVQRLRFEHPEVRCVVVTSARDRTFSSG
                     ANIRMLAQSSHPWKVNFCKFTNETRNAIEDATECSGQTYLAAVNGTAAGGGYEIALAC
                     EQILLVDDNSTAVSLPEISLLGVLPGTGGLTRVTDKRKVRKDLADVFATRPEGVRGKT
                     AVAWGLVDEAVPRATFVDVVRQRALAAAARSTRPADATGITLATLHRDVTDEKITYDH
                     VTAVVDRAASVAYITIRGPRPVEVAGSPARLHELGADFWMLAAARELDDLILHLRVNE
                     LEIGTWVFRTEGASELVLAGEGIIAAHRGDSWLANEIGLFVKRTLKRLDVTSRSLIAL
                     IEPGSCFSGWLLDLAWACDRQYMLEGVLEGDEREPASITLSEANAGPYPMGNRLTRLE
                     SRFHGHPGVLDNLRAAFDRPLLAAEALELGLVTAAPDDLDWDDEVRLALEERAALSPD
                     ALTGMEANHRFVGPETMETKIFGRLAAWQNWIFTRPNAVGPEGALERFGTGQRPRFDR
                     KRV"
     gene            1539..>2138
                     /locus_tag="VF061_02380"
     CDS             1539..>2138
                     /locus_tag="VF061_02380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668374.1"
                     /translation="MSQGIDYTERIPNNVDLHNDRRLQRALESWQPKFLTWWAEMGPA
                     LATRDVYLRTAINVGREGWAQFGHVAVEDYRWGIFLAERAGEREIAFGAHKGEPAWQQ
                     VPGEYRADLQRLIVIQGDTEPASVEQQRNLGATAPSLYDLRNLFQVNVEEGRHLWAMV
                     YLLHKHFGRDGREEAEALLERRSGDADNPRILGAFNERTP"
BASE COUNT          370 a          654 c          792 g          322 t
ORIGIN      
        1 ctgaagatga actcgtacga cctcggcgtc gacatcgaac tgcacgacgc ggtgcagcgg
       61 ctgcgcttcg aacaccccga ggtgcgctgt gtcgtggtga ccagtgctcg cgatcggacg
      121 ttcagttcgg gggccaacat ccggatgctc gcgcagtcca gccacccgtg gaaagtgaac
      181 ttctgcaagt tcaccaacga gactcgaaac gccatcgagg acgcgacgga gtgctccggg
      241 cagacctacc tcgccgcggt gaatgggacg gcggccggcg gcgggtacga aatcgcgctg
      301 gcatgtgagc agatccttct cgtggacgac aactccaccg cggtgtcact gccggagatc
      361 tcgctgctgg gcgtgttgcc cggcacgggc ggcctgaccc gggtgaccga taaacgcaag
      421 gtacgcaagg atctcgccga cgtgttcgcc acgcggccgg agggggtacg gggaaagacc
      481 gcggtcgcgt ggggactggt cgacgaggcg gtgccccgag ccacgttcgt tgacgtggta
      541 cggcaacgcg cgctcgcggc ggcggcccgc tccactcgac cggccgacgc gacggggatc
      601 accctggcga cgctgcaccg ggacgtgacg gatgagaaga tcacctacga ccatgtgacg
      661 gccgtggtcg accgggccgc ctcggtcgct tacatcacga tccgggggcc acgaccggtg
      721 gaagtggccg ggtcaccggc tcggctgcac gagctcggag cggacttctg gatgttggcc
      781 gccgcccgtg agctcgacga ccttatcctg cacctgcggg tcaacgagtt ggagatcgga
      841 acctgggtgt tccggacgga gggtgccagt gagctcgtcc tcgcgggcga gggcatcatc
      901 gcggcgcatc gcggggactc ttggttggcg aacgagatcg ggctcttcgt gaagcggaca
      961 ctcaagcgac tggacgtgac gagccgcagc ctgatcgcgc tgatcgagcc gggcagctgt
     1021 ttctccggat ggttgctgga cctggcctgg gcgtgcgacc ggcagtacat gttggaaggc
     1081 gtgctggagg gagacgagag ggagccggcc tcgatcacac tgagcgaggc gaacgccggc
     1141 ccgtacccga tggggaacag gctcacccga ctagagtcgc gcttccacgg gcacccaggc
     1201 gtactggata atttgcgagc ggcgtttgac cggccgctgc tcgccgcgga ggcgctggaa
     1261 ctgggcctcg ttacagcggc gccggacgac ctcgactggg acgacgaggt gcgcctggcg
     1321 ctggaggagc gggctgccct atccccggat gcgctcaccg ggatggaggc caaccaccgg
     1381 ttcgtggggc cggagacaat ggagacgaag atattcggcc ggctggccgc ctggcagaat
     1441 tggatcttca cgcgcccgaa cgctgtgggg ccggagggcg cactggagcg gttcggcacc
     1501 ggtcagcggc cccgattcga ccggaagcgg gtgtagtggt gagccagggc atcgattaca
     1561 cggagcggat tccgaacaac gtggacctgc acaacgaccg tcgcctgcaa cgggcgctgg
     1621 agtcgtggca gccgaagttc ctcacctggt gggcggagat gggtccggcg ctggccacga
     1681 gggacgtcta ccttcgtacg gcgatcaacg tgggccggga aggctgggcg cagttcgggc
     1741 acgtcgcggt ggaggactac cggtggggaa tcttcctggc cgagcgggcg ggggagcggg
     1801 agatagcctt cggggcgcac aagggcgagc cggcgtggca acaggtgccg ggcgagtacc
     1861 gagcggatct ccagcggctg atcgtgatcc aaggtgacac tgagccggcg tcggtggagc
     1921 agcagcgcaa cctcggtgcc accgcgccga gcctgtatga cctgcgcaac ctcttccagg
     1981 tcaatgtgga ggagggccgg cacctgtggg cgatggtgta cctgctgcac aagcacttcg
     2041 gccgcgacgg ccgcgaggaa gccgaggcgc tgctcgagcg ccgcagcggt gacgccgaca
     2101 acccgcgcat cctcggtgcc ttcaacgagc gcacgccg
//
LOCUS       DASUYN010000124         3416 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_482364, whole genome shotgun sequence.
ACCESSION   DASUYN010000124 DASUYN010000000
VERSION     DASUYN010000124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3416)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3416)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3416
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_482364"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1810)
                     /locus_tag="VF061_02385"
     CDS             complement(<1..1810)
                     /locus_tag="VF061_02385"
                     /inference="COORDINATES: protein motif:HMM:NF015213.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0033573 - high-affinity iron permease
                     complex [Evidence IEA];
                     GO_function: GO:0005381 - iron ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0034755 - iron ion transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family protein"
                     /protein_id="HEX6668375.1"
                     /translation="MKMNLIGAALPILLSALPTASPRQTPVVQDSAAIVRRVAATATL
                     AAQEYRIGVVDGRVVAAAEVEEARLFLEEARRSAASLATDSAAHPVATLDSLLALVRG
                     LGSPDTLDARVRDFTAALARRHGVSLDDLPRRPPDLARGAEIYRASCAGCHGDLGRGD
                     GPLAAGLDPAPANLADWDALSDQSPLDYYRRINIGVVGTAMPAFEDRLPARDRWAVAL
                     YASTLRLPPASGEAPESFRDFARTGRISDAALLDSLGAARDGSGGGLGLLAAVRAHQS
                     ATSPAGHVLAEVRAQVESAYALARTGDPGAPTKALDAYMTFEQIERDVRGRDAALAAE
                     LEAEFAGLRAAATAGAGPQLDAARARVTGALDRAGTVLGEGLSATNLFVQSFVIMLRE
                     GLEAILIVGALMTFLAKMGASDRRRHVNAGILAAIVASLLTALALETVFHLSPAHQEV
                     LEGATMVVATVVLFYVSYWLLSKMEVVKWTHFVKSKVHDAVTHGSALALGTAAFLAVY
                     REGFETVLFYKALFISAGPTAASAPVVGGMLAGLVILVAVYLGVNRFGVRLPLKPFFA
                     VTSAFLYYMALVFAGSGIAELQEGGVLPLTPVAGIPR"
     gene            1871..>3416
                     /locus_tag="VF061_02390"
     CDS             1871..>3416
                     /locus_tag="VF061_02390"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX6668376.1"
                     /translation="MNEATYTYAALAFLAVCLAAWFWVERDRARRAERLIAATRRMAA
                     GDLEARAGVRGHDPLGVLADAIAQMASRLKTLENTLEERQNWFGLLLAHASDLIFTLD
                     SEWKIGTASPSLPRFLGWPTDQMLGRPLPEFLHPDDAEAALAAFDAIATGADPGEPIA
                     FRLLHVDGTWRSVEALADRPRNWSGPERVVVTAHDLGPRERLERELGEARRMEVLGRF
                     AGGVAHDFDNLLTAIQGYTSLLLRDLRPGDPRHEGLEEIRQSSERAAVLTRQILAFGR
                     RHAAESAPVDLNRLVSNLARLLPPLLGDDLSLVTVLAPSVGLVRADPGHLEQVVMNLV
                     VNARDAMAEGGRLTLGTANDQITEYDPRASPELPPGHYVTLTVRDTGTGIAPEALPSI
                     FEPFYTTKGEGRARGLGLATVYGIVKQCEGHIEVDSAPGRGTTVRVYFPLARGESSTA
                     GSAERIERREGIILLVEDEEPVRRFARAALEEQGYRVLEAGHGWEALMRLAEFDSAVN
                     LVIADVM"
BASE COUNT          515 a         1213 c         1246 g          442 t
ORIGIN      
        1 cccgcgggat ccctgccacc ggggtcagcg ggaggacgcc cccttcctgg agctcggcga
       61 tgccggagcc ggcgaagacc agggccatgt agtacaggaa ggcgctggtg accgcgaaga
      121 acggcttgag cgggagccgg acgccgaacc ggttcactcc gaggtacacg gcaaccagga
      181 tcacgagccc ggccagcatg ccgccgacca ccggcgccga agcggcggtc ggcccggcgg
      241 agatgaacag cgccttgtag aacagcaccg tctcgaagcc ctcgcggtac accgccagga
      301 aggccgccgt gcccagggcc agcgcggatc cgtgggtgac ggcgtcgtgg accttgctct
      361 tgacgaaatg cgtccacttc accacttcca tcttgctcag cagccagtag ctcacgtaga
      421 acagcaccac cgtggcgacc accatggtcg cgccctcgag cacttcctgg tgggcggggg
      481 agagatggaa gaccgtctcc agggccagcg cggtgagcag gctcgcgacg atcgccgcca
      541 ggatgcccgc gttgacatgg cgccggcggt cggacgcacc catcttggcg aggaacgtca
      601 tcagcgcgcc gacgatcagg atcgcctcga ggccttcgcg cagcatgatc acgaaggact
      661 gcacgaagag gttggtcgcc gagagccctt cgccgagcac ggtgccggca cggtcgaggg
      721 ccccggtgac ccgcgcgcgc gccgcgtcga gctgggggcc ggcccccgcc gtcgcggcgg
      781 cgcggaggcc ggcgaattcg gcctccagct ccgcggcgag ggcggcgtcg cggccgcgca
      841 cgtcccgctc gatctgctcg aaggtcatgt aggcgtcgag cgccttggtc ggtgcgcctg
      901 gatcgcccgt ccgcgccagc gcgtaggccg actccacctg ggcgcgcacc tcggccagca
      961 cgtgaccggc gggtgaggtc gcgctctggt gcgcccgcac ggcggccagc agacccagcc
     1021 cgccgccgga gccatccctc gccgcgccga gcgagtcgag cagggcggcg tcggatatcc
     1081 tgccggtccg ggcgaagtcg cggaaggact cgggcgcctc gccggacgcc ggcggcaggc
     1141 ggagggtgga ggcgtacagc gcgaccgccc agcgatcacg ggcggggagc cgatcctcga
     1201 aggccggcat cgccgtgccg acgacgccga tgttgatgcg ccggtagtag tccagcgggg
     1261 actgatcgct caaagcatcc cagtccgcca ggttcgccgg agccgggtcg agaccggcgg
     1321 cgagcggacc gtccccgcgc ccgaggtcgc cgtggcagcc ggcgcaactc gcccggtaga
     1381 tctcggcccc gcgcgcgagg tccggcggcc ggcgcgggag gtcgtccagg gacaccccgt
     1441 gccgccgggc caaggctgcg gtgaagtcac ggacccgcgc atccagggta tcgggcgagc
     1501 cgagccctct caccagcgcg aggagggagt ccagcgtggc gacgggatgg gctgcggagt
     1561 cggtggccag cgaagcggcg gaacgccggg cctcctccag aaagaggcga gcctcctcca
     1621 cctcggcggc cgcgaccaca cgaccgtcca ctacgccgat ccggtactcc tgggcggcca
     1681 gggtggcggt ggccgcgacc cggcgtacga tcgcggcgga atcctggacc acaggggtct
     1741 gccggggaga agcggttggg agggccgaga gcaggatcgg cagcgccgcg ccgatgagat
     1801 tcattttcat ccggtttcga gaaagtatcg cctaaactag agtccgccgg tcgcaattga
     1861 aagagccgcc gtgaacgaag ccacctacac ttacgccgcc ctggccttcc tcgcggtctg
     1921 cctggcggcc tggttctggg tcgagcgcga ccgcgcccga cgcgcggagc ggctgatcgc
     1981 ggcgacccgg cggatggccg ccggcgacct cgaggcccgg gccggcgttc ggggacacga
     2041 tcccctcggg gtcctggccg acgcgatcgc ccagatggcg tcgcggctca agaccctgga
     2101 gaacacgctc gaggagcggc agaactggtt cggtctgctc ctcgcgcacg cctccgacct
     2161 catcttcacg ctcgacagcg agtggaagat cgggaccgcg agcccatccc tcccccgctt
     2221 cctcggctgg cccaccgacc agatgctcgg ccggccgctt cccgagttcc tccaccccga
     2281 tgacgccgag gcggcgctcg ccgccttcga cgctatcgcg accggcgccg atcccggcga
     2341 gcccatcgcc ttccggctgc tccacgtgga cggcacctgg cggagcgtcg aggctctggc
     2401 cgaccggccg cgcaactgga gcggcccgga gcgggtcgtg gtcaccgccc atgacctcgg
     2461 cccgcgcgag cggctggagc gtgagctcgg ggaggcgcgg cggatggagg tgctcggccg
     2521 ctttgccggc ggcgtcgccc acgatttcga taacctgctc acggccatcc agggctatac
     2581 cagtctgctg ctgcgcgacc ttcgccccgg cgacccccgg cacgagggac tggaggagat
     2641 ccggcagtcc tccgagcgcg cggcggtgct gacccggcag atcctcgcct tcggccgccg
     2701 tcacgccgcc gagtccgccc cggtggacct gaaccggctg gtgagcaacc tggcgcgcct
     2761 gctgccgccg ctcctagggg acgacctctc cctcgtcacg gtgctcgcgc ccagcgtcgg
     2821 cctggtgcgc gccgacccgg gacacctgga gcaggtggtc atgaacctgg tggtgaacgc
     2881 gcgcgacgcg atggcggagg gcggccggct caccctgggc acggcaaacg accagatcac
     2941 cgagtacgac ccgcgcgcga gccccgagct gccgcccggc cactatgtga cgctgaccgt
     3001 gcgcgacacc ggcacgggca tcgctcccga agccctgccc tcgatcttcg agccgttcta
     3061 caccaccaag ggggagggtc gggcccgggg gctcggcctc gcgacggtgt acgggatcgt
     3121 gaagcagtgc gagggacata tcgaggtgga cagcgcgccc ggccggggga cgacggtgcg
     3181 ggtgtatttc ccactcgcac ggggcgagtc gtccaccgcc ggctcggccg agcggatcga
     3241 gcggcgcgag gggatcatcc tgctggtgga ggacgaggag cccgtgcgcc ggttcgcccg
     3301 cgccgcgctg gaggagcagg gctaccgcgt gctggaggcc ggtcacggtt gggaggccct
     3361 gatgcgcctc gccgagttcg acagcgcggt gaacctggtg atcgcggatg tgatga
//
LOCUS       DASUYN010000125         4106 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_922797, whole genome shotgun sequence.
ACCESSION   DASUYN010000125 DASUYN010000000
VERSION     DASUYN010000125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4106)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4106)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4106
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_922797"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..345
                     /gene="rsgA"
                     /locus_tag="VF061_02395"
     CDS             <1..345
                     /gene="rsgA"
                     /locus_tag="VF061_02395"
                     /inference="COORDINATES: protein motif:HMM:NF015170.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase RsgA"
                     /protein_id="HEX6668377.1"
                     /translation="GLQLRTGEVSRRIRRGRHTTVSSVMIPLEGGGYLVDTPGFSEVG
                     MWGVEPRSLPDCFPDFRPFLGDCRYGDCRHRSEPGCRVREALAGGAIAPDRYESYLAL
                     LQELTEQPRDWE"
     gene            complement(353..691)
                     /locus_tag="VF061_02400"
     CDS             complement(353..691)
                     /locus_tag="VF061_02400"
                     /inference="COORDINATES: protein motif:HMM:NF015758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide pyrophosphohydrolase"
                     /protein_id="HEX6668378.1"
                     /translation="MSLTEAQRRVDAWIGGFEEGYFHPLTNLARLAEEVGELAREVNH
                     RFGQKTKKPEEPEGDLAMEMADILFVLICMANREGIDLQQAFDRMMAKVETRDRGRWT
                     AKADGETLSP"
     gene            complement(688..1212)
                     /locus_tag="VF061_02405"
     CDS             complement(688..1212)
                     /locus_tag="VF061_02405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase
                     domain-containing protein"
                     /protein_id="HEX6668379.1"
                     /translation="MTLKGKTILFFAGPLYEDLELWYPKIRLEEEGARTVVAGTGEKT
                     YQGKRGYPLTVDTSVDQLEAASFDGLVIPGGYAPDVMRRSPKLLQLTREIHEAGKPVA
                     FICHAGWVPISAGIVNGRRGTSVGAIKDDLVNAGMRWEDSPVVVDGNLISSRTPADLP
                     EFMRALIRALQGGR"
     gene            1261..1518
                     /locus_tag="VF061_02410"
     CDS             1261..1518
                     /locus_tag="VF061_02410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668380.1"
                     /translation="MADIRPRERILANLETIYREAYERAKNFGDQGRMIDLESAYMRD
                     QLMLEILLDIRDLFSVTPAAPSPGGTALEKLEALRRLTRLR"
     gene            1527..3215
                     /locus_tag="VF061_02415"
     CDS             1527..3215
                     /locus_tag="VF061_02415"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEX6668381.1"
                     /translation="MPHVAAFRRLALLALAALAACRTGAETSAGPADLVVYGRVWTGD
                     SARPWAGAVAVAGDTVSAIGDSAEIAERVRPGTRVLANGDGLVTPGFMDGHLHFLDGG
                     FQLASVDLRPADAKTEFIQRVAAFVSERKPGEWVVGGDWDHERWPGTPLPHRSWIDSI
                     TPDNPVLLYRLDGHMALANSAALRLAGIDRRTRDIPGGVIVRDPSGEPTGMLKDEAMG
                     PVQDVIPDPSEPQRDAALQRALEHAAARGVTAFAHVSVPLEELGAYLRARAAGTLTAR
                     AALYFPIEDWRKVADTVAKIGRGDDWVWIGGVKGYMDGSLGSTTALFFQPYEDDPSTP
                     GVLTTPEDSMRAWIGGADSAGLQVVVHAIGERANALLLSIFDSVARAHGEKDRRFRVE
                     HAQHLRREDIPRFARLGVIASMQPYHAIDDGRWAEKRIGPERIKTTYAFRSLLDRGAV
                     LAFGSDWTVAPIEPLLGIYAAVTRRTLDGKNPDGWVPQEKISVEETLRAYTAGNAFGV
                     FAEERRGKLVPGYLADLVLLDRDLTRIPPEEIEGAAVMATVVGGRVVYEGKPGR"
     gene            3246..>4106
                     /locus_tag="VF061_02420"
     CDS             3246..>4106
                     /locus_tag="VF061_02420"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEX6668382.1"
                     /translation="MEPALLSTDPARPVPSWQRYGVALAAVALGTGVRLLTEPVLGPG
                     LQFLTYFPAVFVTAALAGFFPAVLATLLSAALAQLLFSPSRNLDLGDPAAALGVALFL
                     GIGTGMGWLGEARLRALARARREAMEARRQEEVAGDAAVEAEESAAQAEEEMLRAEEE
                     ATRAREALEEARTAHERTHAVLESTSDGYLGIDAEWRVSYLNRRGAELFAAHGLAPQA
                     VLGRTFWDVWPDTLGTEFERQYRRVMAERVHATFESWYAPYQRWYEVHGFPTPNGGIG
                     VFFRDITERRR"
BASE COUNT          573 a         1482 c         1440 g          611 t
ORIGIN      
        1 ggcctccagc tccgcaccgg agaagtgagc cgccggatcc gccgggggcg ccacaccacg
       61 gtgtcgtcgg tgatgatccc gctggagggc ggggggtacc tggtggatac gccggggttc
      121 agcgaggtgg ggatgtgggg cgtcgagccg cggtcgttgc cggattgctt tcccgatttc
      181 cggccgttcc tcggcgactg ccgctacggc gattgtcgcc accggagcga gcccggctgc
      241 cgggtccgcg aggcgctggc cggcggggcg atcgcgcccg accggtacga gtcgtatctg
      301 gccctgcttc aggagctcac ggagcagccg cgtgactggg agtaggggaa cgtcagggtg
      361 acagcgtttc tccatccgct ttcgccgtcc accgcccccg atctcgcgtc tccaccttcg
      421 ccatcatccg gtcgaaggcc tgctgcaggt cgatcccctc ccggttcgcc atgcagatga
      481 gcacgaacag gatgtcggcc atctccatcg cgagatcgcc ctcgggctcc tccggcttct
      541 tggtcttctg cccgaaccgg tggttgacct cccgcgccag ctcccccacc tcctcggcga
      601 gacgcgccag gttggtgagc ggatggaagt acccctcctc gaacccgccg atccacgcat
      661 ccacccgccg ctgcgcctcg gtgagactca tcggccgccc tggagggcgc ggatcagggc
      721 ccgcatgaac tccggcaggt ccgccggcgt gcgcgacgag atgaggtttc cgtccaccac
      781 gaccgggctg tcctcccatc gcatcccggc attcaccagg tcgtccttga tcgccccgac
      841 gctggtgccc cggcggccgt tcacgatgcc ggccgagatc ggcacccagc ccgcgtggca
      901 gatgaaggcg accggcttgc ccgcctcgtg gatctcgcgg gtgagctgga gcagcttggg
      961 cgagcggcgc atgacgtcgg gagcgtagcc tcccggaatg accaatccgt cgaagctcgc
     1021 ggcctcgagc tggtccacgc tggtgtccac ggtcaggggg tacccgcgct tcccctggta
     1081 ggtcttctcg ccggtgccgg ccacgaccgt gcgcgccccc tcttcctcga gacggatctt
     1141 ggggtaccac agctccaggt cctcgtacag cggcccggcg aagaacagga tcgtcttgcc
     1201 cttgagagtc atgacccgta aggtaagcgg tatcgtaccc cgactgacga cctggagccc
     1261 atggccgaca tccgcccccg cgagcgcatc ctcgcgaacc tggagaccat ctatcgcgag
     1321 gcgtacgagc gcgcgaagaa cttcggcgac cagggccgca tgatcgacct cgagagcgcc
     1381 tacatgcgcg accagctcat gctggagatc ctgctcgaca tccgcgatct gttctcggtg
     1441 acgcccgccg cgccctcgcc gggcggcacc gcgctggaga agctcgaagc cctccgccgc
     1501 ctcactcgcc ttcgctgagg aacccgatgc cgcacgtcgc cgcgttccgc cggctggcgc
     1561 tcctcgcgct cgcggcactg gcagcctgcc gcaccggcgc cgagacctcc gccggcccgg
     1621 ccgacctcgt ggtctacggc cgggtctgga ccggcgattc ggcccgcccc tgggccgggg
     1681 ccgtcgcggt cgccggagac acggtctccg ccatcggcga cagcgcggag atcgcggagc
     1741 gggtgcgccc gggcacccgg gtgctcgcca acggcgacgg tctggtcacg ccgggcttca
     1801 tggacggcca cctccatttt ctggacggcg ggttccagct cgcgagcgtg gacctccgtc
     1861 ccgccgatgc caagaccgag ttcatccagc gggtcgcggc cttcgtctcg gagcggaagc
     1921 cgggcgagtg ggtcgtcggc ggggactggg accacgagcg ctggcccggc accccgctcc
     1981 cgcaccggag ctggatcgac tccatcactc cggacaatcc ggtgctgctc taccgtctgg
     2041 acggccacat ggcgctcgcc aactccgccg cgctccgcct ggccgggatc gatcgccgga
     2101 cgcgcgacat ccccggcggg gtcatcgtgc gcgacccctc gggcgagccg accggcatgc
     2161 tcaaggacga agccatgggg ccggtccagg acgtcatccc ggacccgagc gagccccagc
     2221 gcgacgccgc gctccaacgg gccctggagc acgccgctgc gcgaggggtc accgccttcg
     2281 cccacgtgag tgtcccgctc gaggagctgg gcgcctacct gcgggcgcgg gcggcgggca
     2341 cgctgaccgc ccgtgccgcg ctctacttcc cgatcgagga ctggcgcaag gtagcggaca
     2401 ccgtcgcgaa gatcgggcgg ggcgacgact gggtctggat cgggggggtg aagggctaca
     2461 tggacgggtc cctcggctcg accacggcgc tcttcttcca gccctacgag gacgacccct
     2521 ccacccctgg ggtgctcacc acgccggaag actccatgcg cgcctggatc ggcggcgcgg
     2581 attccgccgg gctccaggtg gtggtgcacg cgatcgggga gcgcgccaac gccctcctgc
     2641 tctcgatctt cgacagcgtc gcccgggccc acggcgagaa ggaccggcgc ttccgggtcg
     2701 agcacgccca gcacctccgg cgggaggaca tcccccggtt cgcccgactg ggcgtgatcg
     2761 catccatgca gccgtaccac gcgatcgacg acggccgctg ggcggagaag cggatcgggc
     2821 ccgagcgaat caagaccacc tacgccttcc gctcgctgct cgaccgcggc gccgtcctcg
     2881 ccttcggctc cgactggacc gtggcgccca tcgagccgct cctcggcatc tacgcggcgg
     2941 tcacccgccg cacgctggac gggaagaacc cggacggctg ggtgccgcag gagaagatca
     3001 gcgtggaaga gaccctgcgc gcctacacgg cggggaatgc cttcggcgtg ttcgccgagg
     3061 aacgtcgggg gaagctggtg cccggctacc tggccgacct ggtgctgctc gatcgcgatc
     3121 tcacccggat cccgccggag gagatcgaag gggcggccgt gatggcgacg gtcgtcggcg
     3181 gccgggtggt gtacgaaggg aaaccgggcc gctaagtcag gccgacacac ccactcccag
     3241 gggccgtgga acccgcactt ctctcgaccg atccggcgag gccggtaccg agttggcagc
     3301 gctacggtgt cgcgctcgcc gccgtcgcgc tgggcaccgg cgtcaggctg ctgaccgagc
     3361 ccgtgctcgg gccagggctg cagttcctca cgtatttccc cgcggtcttc gtgaccgccg
     3421 cgctcgcggg tttcttcccc gcggtgctcg cgaccctcct cagcgccgcc ctcgcccagc
     3481 tcctcttctc accgagccgg aacctggatc tgggcgaccc ggccgcggcg ctgggagtcg
     3541 cgctgttcct gggcatcggg accggcatgg gctggctggg ggaggcccgc cttcgggcct
     3601 tggcccgggc gcggcgcgag gcgatggaag cgcggcggca ggaggaggtg gcgggggacg
     3661 cggcagtcga ggcggaggag tcggcggccc aggcggagga ggagatgctg cgggcggagg
     3721 aggaggcaac tcgcgctcgg gaggcgctgg aagaggcacg gacggctcat gagcgcaccc
     3781 acgcggtgct ggagagcacc tccgacggct acctgggcat cgatgcggag tggcgggtga
     3841 gctatctcaa tcgccgcggc gccgagctgt tcgcggcgca cggcctcgcg cctcaggccg
     3901 tcctggggcg cactttctgg gacgtgtggc ccgacacgct ggggaccgag ttcgagcgcc
     3961 agtaccgccg ggtgatggcg gagcgggtcc acgccacctt cgagagctgg tatgccccct
     4021 atcagcgctg gtacgaggtc cacggcttcc ccacgccgaa cggcggcatc ggcgtgttct
     4081 tccgcgacat caccgagcgc cgccgg
//
LOCUS       DASUYN010000126         4721 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_922826, whole genome shotgun sequence.
ACCESSION   DASUYN010000126 DASUYN010000000
VERSION     DASUYN010000126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4721)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4721)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4721
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_922826"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1822
                     /locus_tag="VF061_02425"
     CDS             <1..1822
                     /locus_tag="VF061_02425"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF012403.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEX6668383.1"
                     /translation="SRGRLPDVRRGLVIVDEAHHFRNSCTLRYRHLAAWLLGRRVLLV
                     TATPVVNRLADLLHQLLLGVRDDALAAEGVVSLRGLLGRGKGSPALGSVVVVSAPAEG
                     HRPDRKSVSIGAGRVETAAAEASLASLDRLRLSRRPEIEALVRTVLRRAMASSPAALS
                     GALRRYRHLLLHARDAARTGRPLDRAAIRRFTGDLEEQLIWWELMPSTEHPSDLCLDD
                     LESIDGVLRDAARAEGGPDGKVERLRALLADGISTLIFTTRRETVGYLRDRLAPPALA
                     WCTGVRAGLGPCPLPRATVLGWFRERGGARAASPARHLIATDVAAEGLDLQRAARVVH
                     YDLPWTPMRLEQREGRAVRLGSVNATVEVVTFGPPAPVERALRVTHALALKARLPSVA
                     GLGAAGRGLWQWRSDLADAYATGGACPGVAAVAAGPAGVLALFELYGRRDDVARRLSS
                     TLVWVDPAGGWTEEESVVAARLETVVSAAPAAADPDRLNAALGLLAAPIRSRLVLARG
                     SRWSAPAADRAAHRVTLRLHRAVRQAARRRDLEALAGLERALAFVGRGHTAGETLELE
                     RLAGLPEGCFEREAARQAAGVGGWSTIEPRLAGVVLFVPG"
     gene            complement(1839..2024)
                     /locus_tag="VF061_02430"
     CDS             complement(1839..2024)
                     /locus_tag="VF061_02430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668384.1"
                     /translation="MQPVELVALMAAIIYSGRTGKDSRKVETRQSAVEEAWHLWHLAM
                     DEWSDPGARRQDDDLVP"
     gene            2110..2772
                     /locus_tag="VF061_02435"
     CDS             2110..2772
                     /locus_tag="VF061_02435"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HEX6668385.1"
                     /translation="MPAIRTVLFDLDGTLIDSVRLILDSYHHTLATHGLPPRTDEEWL
                     EGVGTPLTAQFAAWGNDPGTLEALIATYREYNLKHHDRMVTVYPGVVNVVQALKQDGI
                     ATGLVTSKNRTGAVRGLALARLEALMDVLVCADEVDNPKPHPEPVERAMRLLRADAAS
                     TIYVGDSIHDMRSGRAAGVRTAAVLWGPFGRSHLEGARPDYWLARPDELLVLVRESGA
                     SG"
     gene            complement(2784..>4721)
                     /locus_tag="VF061_02440"
     CDS             complement(2784..>4721)
                     /locus_tag="VF061_02440"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX6668386.1"
                     /translation="LMLLEPGGEHLRLASAPSLPLELTTSVRVVAVGPAQGSCGTAAH
                     RRVPVLVRDIATDPLWDHQQREIVLAAGYRGCWSVPILSTGGAVLGTFANYYREPRGP
                     SVEEERVMEIASHLAGIAIERSRNLEALAQSSRLLQQVLETLPVGVWVVGPSGRIIYG
                     NAAGQQLWGGVRYVSIDGFDQFKGWWVESGRQIAPEEWAGARAVRDGEISLNELIRIQ
                     GFDGTERVILNSAVPIMGADGAIEGAIVLNQDVSEQRAAEEALRRSEEQLRQAQKMEA
                     VGQLAGGIAHDFNNLLTAILSYCELLLEEVRQGDPIRADVEQIRQAGQRAAGLTRQLL
                     AFSRRQVLQPKVLSLNAVVENTEPMLRRLIGADIVLEISVQPGPWHVLADPGQLEQVL
                     VNLVVNARDAMPRGGRISLATINCELKSDSAERPNGVRPGSYVALEVRDTGVGIDPAN
                     HARVFEPFFTTKEPGKGTGLGLSTVYGIVQQSGGHVTVESAPGKGATFTVLLPRHLGG
                     EPHPTSKLDRRRLPGGTETLLLVEDEAAVRSSARRLLERQGYTVLEARHGADALRIVE
                     ESGRQIDLVVTDLVMPEMGGRELAERLRTHRPGLRVLFMSGYTEKVIASGGVMPPNTG
                     FVEKPFTVEQLMRRLREILDE"
BASE COUNT          628 a         1702 c         1689 g          702 t
ORIGIN      
        1 cagtcgcggg cgcctccccg atgtccggcg ggggctcgtg atcgtggacg aggcgcacca
       61 cttccgcaac tcgtgcacct tgcgctaccg ccacctcgcg gcctggctcc tgggccggcg
      121 cgtgctgctg gtgaccgcta ccccggtggt caatcgactc gccgatctgc tgcaccagct
      181 gctcctcggc gtgcgcgacg acgcgctggc cgcggaggga gtggtgtcgc tgcgcggact
      241 gctcggtcgc gggaaggggt caccggcgtt aggcagcgtg gtcgtcgtgt ccgcccccgc
      301 cgagggccac cggccggacc ggaaatcggt ctcgatcggc gccggccgag tcgagacggc
      361 ggccgccgag gcgtcactcg catccctcga ccgactgcgg ctgtcgcggc gcccggagat
      421 cgaggcattg gtccggaccg tgcttcgccg agcgatggcc tcgagcccgg ccgcactctc
      481 cggcgcgctg cgccgctatc gccatctcct cctgcacgcc cgcgacgccg cgcgcacggg
      541 gcgcccgctg gaccgcgcgg cgatccgccg gttcaccggc gatctggagg agcagctgat
      601 atggtgggag ctgatgccct ccacggagca tcccagcgac ctctgcctcg acgatctgga
      661 gtcgatcgac ggcgtgcttc gcgacgcggc gcgtgccgag ggcggaccgg acggcaaggt
      721 cgagcgactg cgggcgctgc tggccgacgg catctccacg ctgatcttca ccactcgacg
      781 ggagaccgtc ggctaccttc gcgatcggct ggcaccgccg gcgctcgcgt ggtgcaccgg
      841 cgtccgcgcg gggctcgggc cgtgccccct gccccgcgcg accgtgctgg gctggttccg
      901 cgagagaggc ggggcgcggg ccgcttctcc ggctcggcac ctgatcgcca cggatgtcgc
      961 cgccgaaggg ctcgacctgc agcgcgcggc ccgcgtggtg cactacgatt tgccgtggac
     1021 ccccatgcgt ctggagcagc gcgaaggccg ggcggtgcga ctggggtccg tgaatgcgac
     1081 ggtcgaggtg gtgacgttcg gcccgcctgc ccctgtggag cgcgcgctcc gggtgacgca
     1141 cgcgctcgcg ctgaaggcgc gactcccgtc cgtcgcgggg ctgggtgcgg cgggccgcgg
     1201 cctctggcag tggcgctcgg acctggcgga tgcctacgcc accggcggcg catgccccgg
     1261 cgtcgcagcg gtggctgccg ggcccgcggg tgtactcgcc ctgttcgagt tgtacggtcg
     1321 gcgggatgat gtcgcccggc ggctgtcgtc cacgctggtc tgggtcgatc cggccggtgg
     1381 gtggacggag gaggaatcgg tggtggcggc gaggctggag accgtggtta gcgcggctcc
     1441 cgccgcggcc gaccccgacc gcctgaacgc ggcactcggg ctgctcgcgg caccgatccg
     1501 ttcacggctc gtgctggcgc gaggcagccg gtggtcggcg ccggcggccg accgcgccgc
     1561 ccatcgggtc acgctcaggc tgcatcgcgc ggtgcgccag gcggcgcgca ggcgtgacct
     1621 ggaagccctc gccgggctgg aacgggcgct cgccttcgtg ggtcggggtc acaccgccgg
     1681 cgagacgctg gagctcgaac ggctcgcggg cctgcccgag ggatgcttcg agcgtgaagc
     1741 ggcccgtcag gccgccggcg tcggcggctg gagcacgatc gagccacgcc tcgccggcgt
     1801 ggtgctcttc gtaccgggat gatcactcac cgaggggctc acggcaccag gtcgtcgtcc
     1861 tgccggcgcg cgccgggatc gctccactcg tccatcgcca ggtgccagag gtgccacgcc
     1921 tcctcgacgg cggactgccg ggtctccact ttgcgggagt ccttcccggt tctgccgctg
     1981 tagatgatgg cggccatgag ggcgacgagc tcgaccggct gcattcggag gctccacgtg
     2041 agtgcggagc acagcatacg gcggcgcttt ccgccacgca acccgaaccg cccggataca
     2101 ttcccctgca tgccagccat ccgcaccgtg ctcttcgatc tcgacggcac gctcatcgat
     2161 tcggtccgcc tcatcctgga cagctaccac cacaccctcg ccacccacgg cctgcccccg
     2221 cggaccgacg aggaatggct cgagggcgtc ggcaccccgc tcaccgcaca gttcgccgcc
     2281 tgggggaacg accccggcac gctggaggca ctgatcgcca cctaccgcga atacaacctg
     2341 aagcaccacg accggatggt gacggtgtac ccgggggtgg tgaacgtggt gcaggcactc
     2401 aagcaggacg ggatcgcgac ggggctggtc acgagcaaga atcgcacggg ggcggtccgt
     2461 ggtctcgcgc tggcgcggct cgaggcgctg atggacgtgc tggtctgcgc ggacgaagtg
     2521 gacaatccga aaccgcaccc cgagccggtg gagagggcga tgcggctcct gcgcgccgac
     2581 gcggccagca cgatctacgt gggcgacagc atccacgaca tgcgctcggg ccgcgccgcg
     2641 ggcgtccgca cggccgcggt gctctggggc ccgttcggcc ggagtcacct cgaaggggcg
     2701 cggccggact actggctggc gcggccggac gagttgctgg tcctggtgag ggagagcggc
     2761 gcctcggggt gacgccggtc cgcctattcg tccaggatct cccgcagccg tcgcatgagc
     2821 tgctccacgg tgaacggctt ctccacgaac cccgtgttgg gcggcatgac gccgccggac
     2881 gcgatcacct tctcggtgta gcccgacatg aagaggaccc tgagtcccgg gcggtgggtg
     2941 cgcaggcgct ccgccagctc cctgcccccc atctcgggca tcacgagatc ggtcaccacc
     3001 aggtcgatct ggcgcccgct ctcctcgacg atccgcagcg cgtcggcacc gtgtctggcc
     3061 tccagcaccg tgtagccctg ccgctcgagc agccggcggg ccgagctccg gaccgcggcc
     3121 tcgtcctcca ccagcagcag cgtctcggtc ccgccgggaa ggcggcggcg gtccagcttc
     3181 gacgtcgggt ggggctcccc gccgagatgt ctcggcaaca gcacggtgaa ggtggcgccc
     3241 ttgccgggcg cgctctccac cgtgacgtgc cccccgctct gctgcacgat gccgtacacc
     3301 gtggacaggc cgaggccggt gcccttcccc ggctccttgg tggtgaagaa cggctcgaag
     3361 acgcgggcat ggttggccgg atcgatgccc acaccggtgt cccgcacctc gagcgcgacg
     3421 taggaaccgg gtcgcacgcc gttgggacgc tccgctgaat cggacttcag ctcgcaattg
     3481 atcgtggcca gggagatccg gccgccccgg ggcatcgcgt cacgcgcgtt caccaccagg
     3541 ttcaccagga cctgctccag ctggccgggg tcggcgagca cgtgccacgg tccgggctgg
     3601 acgctgatct cgagcacgat gtcggcgccg atcaggcggc ggagcatcgg ctcggtgttc
     3661 tccaccaccg cgttgaggga cagcaccttg ggctggagca cctggcggcg gctgaaggcg
     3721 aggagctggc gggtgagacc ggcggcgcgc tgtcccgcct ggcggatctg ctcgacgtcg
     3781 gcgcggatgg gatcaccctg gcgcacctcc tcgaggagca gctcgcagta gctcaggatc
     3841 gcggtgagca ggttgttgaa gtcatgggcg atgccgccgg cgagctgtcc caccgcctcc
     3901 atcttctgcg cctggcggag ctgctcctcg ctccggcgga gcgcttcctc cgccgcccgc
     3961 tgctcgctca cgtcctggtt gaggacgatc gccccctcga tggcgccgtc cgctcccatg
     4021 atgggaacgg ccgagttgag aatgacgcgc tcggtgccgt cgaatccctg gatgcggatc
     4081 agctcgttga gcgagatctc cccgtcgcgg accgcgcggg caccggccca ctcctccggc
     4141 gcgatctgtc ggccgctctc cacccaccag cccttgaact ggtcgaaccc gtcgatgctg
     4201 acgtagcgca cgccgcccca cagctgctga cccgcggcgt tgccgtagat gatccggcca
     4261 ctcggaccca ccacccacac gccgaccggc aaggtctcga gcacctgctg cagcagccgg
     4321 ctggactggg ccagcgcctc gaggttgcgg gagcgctcga tggcgatgcc ggccaggtgg
     4381 ctggcgatct ccatgacccg ctcctcttcg accgacggcc ccctcggctc gcgatagtag
     4441 ttggcgaagg tgccgagcac ggcgccgccg gtggagagga tcggcaccga ccagcagccg
     4501 cgatagcccg ccgccagcac gatctcccgc tgctgatggt cccacagcgg gtcggtggcg
     4561 atgtcccgca ccagcaccgg gacgcggcgg tgcgccgcgg tgccacagct tccctgggcc
     4621 gggcctacgg ccacgacgcg aacggaggtc gtcaactcca gtggcaagga cggcgcgctc
     4681 gccagcctga ggtgctcgcc accgggctcc agcaacatga g
//
LOCUS       DASUYN010000127         4270 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_701604, whole genome shotgun sequence.
ACCESSION   DASUYN010000127 DASUYN010000000
VERSION     DASUYN010000127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4270)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4270)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4270
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_701604"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1954)
                     /locus_tag="VF061_02445"
     CDS             complement(<1..1954)
                     /locus_tag="VF061_02445"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX6668387.1"
                     /translation="MSPASQTPALPEALARLQAAITERYLLGRELGRGGMATVYLAQD
                     LKHDRPVAIKVLRGGLGSLFGPERFQREIRLAAQLQHPNILPVYDSGTEDGILWYTMP
                     YVEGDTLRGRLRRRGRFSVGEAVPVLQDLARALAYAHRRGVVHRDVKPENVMLGEDSV
                     LLADFGVAKAVEPIGDPGLTVAGGLVGTPAYMAPEQVAAEPTLDHRADLYALGVVAYE
                     LLVGEPPFINLELGPMLVAHATREPVPLTVRRPDVPAVLAEIVARCLRKEPGERWTSA
                     DALCHALRSTAPGTAVVSAPERTDGDGGALEDLGAARAAIDRGRWREAYMRFTAAGGA
                     GQLEPEDLERQAEAAWWVGEGAACIRAREAAYRRYVERGELEAAARVALALAEDHWHR
                     LSRSVAQGWLRRAEQHLEGLAETATHGWLIRLHAMLTLDVQGDPQEAMRHADRSLEIA
                     RRTGDTDLEALAIQDRGRILVAIGRVADGMALIDDAMTFATAGQLTPMTAGRTFCNMM
                     TTCDRLGDYGRAAEWHDAAHRWVEPHSDSVFPGLCRVHHAGILRLRGSLGEAEQEARR
                     AAEELGHFLKDVAGEAFYELGEIRMRMGDHPGAEAMYSEAHGRGRNPQPGLALLRLAQ
                     GNAEAARSMIERSLADPALPALGRAKL"
     gene            complement(2059..2454)
                     /locus_tag="VF061_02450"
     CDS             complement(2059..2454)
                     /locus_tag="VF061_02450"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX6668388.1"
                     /translation="MHSDDSGPSEGSALHRARILVLDDEPMIRHFVARALETAGYEVV
                     VLSPPDGAAGLLADAPFDLVITNSIMPAESGARLVARLRHEFPNIPVLHLDDQSHPLT
                     PEFPLDVPRLGKPFSNNTLLDEVARRLGR"
     gene            complement(2611..3219)
                     /locus_tag="VF061_02455"
     CDS             complement(2611..3219)
                     /locus_tag="VF061_02455"
                     /inference="COORDINATES: protein motif:HMM:NF025679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4382 domain-containing protein"
                     /protein_id="HEX6668389.1"
                     /translation="MVRSRLPGGLLAVALAALAGCGDGAGPGGTTALSLKLTDAPGDV
                     QHAFVTITEINLTGAGGKVVLRDTPYTGDLLTLAGTTADLVVDADVPSGTYAALRFVI
                     SGACIAVENESGGSDIYTTDGYDSAPCGGPATGVLQAPSYAQSGLKVVLDEAALTIEG
                     PQMILLVDFDVEQSFGQVAGQSGAWVMHPVVTGGEIESGAAE"
     gene            complement(3456..3773)
                     /locus_tag="VF061_02460"
     CDS             complement(3456..3773)
                     /locus_tag="VF061_02460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668390.1"
                     /translation="MYAIIRRYTPKGNVDQKALDEFKHRIEDKFLPAAQEIRGFHSYY
                     VVNAGKDLLSISVFEDKTGASESTRRAAQFVKQDPMKDIWGSPELLEGELLVSKEAPV
                     GAH"
     gene            3950..>4270
                     /locus_tag="VF061_02465"
     CDS             3950..>4270
                     /locus_tag="VF061_02465"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX6668391.1"
                     /translation="MSIVAPPITPPGVITQEFHTARAVRRGVIAGVVGNMLEWYDFAL
                     FGFFAQQIGAHFFPAGNPTASLLAAFGTFAAGFLMRPIGGALFGWVGDRFGRKQALIW
                     SVLAM"
BASE COUNT          605 a         1535 c         1491 g          639 t
ORIGIN      
        1 gcagcttcgc gcgaccgagc gccgggagcg cggggtcggc gagcgaccgc tcgatcatcg
       61 agcgcgcggc ctcggcgttc ccctgcgcca ggcgcagcag cgcgagcccg ggctgcgggt
      121 tccggccgcg gccgtgcgcc tcactgtaca tggcctcggc gccgggatgg tcgcccatcc
      181 gcatccggat ctcgcccagc tcgtagaacg cctcccccgc gacgtccttg aggaagtgcc
      241 ccagctcctc ggcagcgcgg cgtgcctcct gctcggcctc gcccagcgag cctcgaagcc
      301 gaaggatccc agcgtggtgg acgcgacaga ggccggggaa cacggagtcg gagtgcggct
      361 cgacccagcg gtgggcggcg tcgtgccatt cggccgcgcg gccgtagtcg cccaggcggt
      421 cgcaggtggt catcatgttg cagaaggtgc ggcccgccgt catcggggtg agctggcccg
      481 ccgtcgcgaa ggtcatggcg tcgtcgatca gggccatccc gtcggcgacc cggccgatgg
      541 cgaccaggat ccggccgcgg tcctggatcg cgagcgcctc gagatcggtg tcgccggtgc
      601 gccgggcgat ctcgagcgac cggtccgcgt gccgcatcgc ttcctgcgga tcgccctgca
      661 cgtcgagcgt gagcatggcg tgaaggcgga tcagccagcc gtgcgtcgcc gtctccgcga
      721 gtccctccag atgctgctcc gcgcggcgga gccagccctg ggccaccgag cgggagagac
      781 gatgccaatg gtcctccgcg agggcgagcg cgacccgggc cgccgcctcc agctcgcccc
      841 gttcgacgta ccggcggtac gccgcctccc gcgcgcggat gcaggccgcg ccttcgccga
      901 cccaccacgc ggcctcggcc tgtcgctcga gatcctccgg ctccagttgc cccgcaccgc
      961 ccgcggccgt gaatcgcatg taggcctcgc gccagcggcc ccggtcgatc gccgcgcgcg
     1021 cggccccgag gtcctccagc gctccgccgt ccccgtccgt ccgttccggt gccgacacca
     1081 ctgcggtacc gggcgcggtg ctccgcaggg catggcacag cgcgtccgcc gaggtccagc
     1141 gctcgcccgg ctccttccgg agacagcggg cgacgatctc ggcgagcacc gccgggacgt
     1201 ccggccgccg cacggtcagc ggcaccggct cgcgggtcgc atgggcgacc agcatcggcc
     1261 ccagctccag gttgatgaac ggcggctcgc ccacgagcag ctcgtaggcc accacgccca
     1321 gcgcgtagag gtcggcgcgg tggtccaggg tgggctcggc ggcgacctgc tccggcgcca
     1381 tgtaggccgg cgttcccacc aggccgccgg cgaccgtgag ccccggatcg ccgatgggct
     1441 cgaccgcctt cgccaccccg aagtcggcca gcaggaccga gtcctcgccg agcatgacgt
     1501 tctccggctt cacgtcgcgg tggaccaccc cgcgccggtg ggcgtaagcg agggcgcgcg
     1561 cgaggtcctg gagcacgggc acggcctccc cgacggagaa ccggccccgg cggcggagcc
     1621 ggccgcggag cgtgtcgccc tcgacgtagg gcatggtgta ccacaggata ccgtcctcgg
     1681 tgccggagtc gtagacgggg agaatgttgg ggtgctggag ctgcgccgcg aggcggatct
     1741 cgcgctggaa ccgctcgggg ccgaagagag agcccagccc gccgcggagc accttgatgg
     1801 cgacagggcg gtcgtgcttc aggtcctggg cgaggtacac cgtcgccatg cccccgcggc
     1861 ccagctcgcg gccgagcagg taccgctcgg tgatcgccgc ctggaggcgg gcgagggcct
     1921 ccgggagggc gggggtctgg ctggcgggag acatgctgga atcctacggg gcgggcggca
     1981 gaagggccag cgctgcgccg gcgccggcgc gcccttgctg gacttcccca cttgctcgga
     2041 caaccggcct cgtatcacct accgcccgag tcgtcgcgcc acctcgtcca gaagcgtgtt
     2101 attggagaac ggtttgccga gtcgtggtac gtccagagga aactctggcg tcagtggatg
     2161 tgactgatcg tccagatgga gcaccgggat attgggaaac tcgtggcgaa ggcgggcgac
     2221 cagtcgagcc ccgctctcgg cgggcatgat gctattggtg atcaccaggt caaagggggc
     2281 gtcggccagg agtccggccg ctccgtcggg agggctcagc accaccacct cataccccgc
     2341 ggtttccagg gcacgagcta cgaagtgccg gatcatcggc tcatcatcga ggaccagtat
     2401 acgggcacgg tgaagcgccg acccttcgct ggggccggaa tcatcggaat gcatgtaaga
     2461 gccttagacc cgactggcgt gccgggagac gcaatgcgag aaggagctgc ctacccggaa
     2521 gataacccct gtgacagcta ccccccgatg ggaaacacag aggccccacc cggatggatg
     2581 gggcccccga gcctgcgtgt ccggcgcgac ctattccgcg gcgcccgact cgatctcgcc
     2641 gcccgtcacc accggatgca tcacccacgc gcccgactgt cccgccacct gcccgaagct
     2701 ctgctccaca tcgaagtcca ccagcaggat catctgcggc ccctcgatcg tgagcgccgc
     2761 ctcgtccagc acgaccttca gcccggactg ggcgtagctc ggcgcctgca gcaccccggt
     2821 ggccggaccg ccgcaggggg cggagtcgta gccgtcggtc gtgtagatgt cgctcccgcc
     2881 gctctcgttc tcgaccgcga tacaggcccc gctgatcacg aaccggagcg cggcatacgt
     2941 tcccgacggc acgtccgcgt ccaccaccag gtcggcggtg gtcccggcca acgtgaggag
     3001 gtcgccggtg tacggcgtgt cgcgcagcac gaccttgccg cccgcgccgg tgaggttgat
     3061 ctcggtgatg gtgacgaacg catgctgcac gtcaccgggc gcatccgtga gcttgagcga
     3121 gagggcggtc gtcccaccgg ggcccgctcc gtcgccgcac ccggcgagcg cggcgagtgc
     3181 cacggccagc agtccaccag ggagcctcga tcgcaccatg gggaagtctc ctgatcgaag
     3241 gaatcggtcg gcggcccgct gcatgaagct gcgtggccgt cggcaacggg tccggcagct
     3301 taccggtccc gcgctcggac gctcgctgcg gcaggaggtt tcggccggat cgtcaagttc
     3361 cggcggcgag ccgacttgcg gcagacctcc cgcgggcgag cgtcccgagt gggttgcact
     3421 cagcgtgcca tccgggccac ccgattcgga gcgaatcagt gcgcgccgac cggcgcctcc
     3481 ttcgacacca gcagctcgcc ctcgaggagc tccgggctgc cccagatgtc cttcatcggg
     3541 tcctgcttca cgaattgcgc cgcccggcgg gtggattcac tcgctccggt cttgtcctcg
     3601 aagacgctga tgctgaggag atccttgccg gcgttcacca cgtagtagga gtgaaatccc
     3661 cgaatctcct gggcggcggg gaggaactta tcctcgatcc ggtgcttgaa ctcgtcgaga
     3721 gccttctggt cgacattccc cttgggcgta tagcgccgaa tgatggcgta catcgctgcc
     3781 tccggtcata gggtcatggg gcgcctgact tcgtcgggcg ccgggccgac actattcgct
     3841 gcgggactgg gggcgtcaag ccccgaggga ccgcgggcgt cttgccgcgg cccgccgcac
     3901 gtaccacgtt ggtgcaccga gccctgccgg cccgactccg gagaccccca tgagcatcgt
     3961 cgcgcctccc atcaccccgc ccggcgtgat cacccaggaa ttccacaccg cccgcgcggt
     4021 tcgtcgcggt gtcatcgcgg gcgtggtggg caacatgctc gagtggtacg acttcgcgct
     4081 gttcggcttc ttcgcccagc agatcggcgc gcacttcttc ccggccggca atcccacggc
     4141 gtcgctcctc gccgccttcg gcaccttcgc cgccggattc ctcatgcggc cgatcggcgg
     4201 ggcgttgttc gggtgggtgg gcgaccggtt cggccgcaag caggcgctga tctggtcggt
     4261 gctggcgatg
//
LOCUS       DASUYN010000128         2699 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1363401, whole genome shotgun sequence.
ACCESSION   DASUYN010000128 DASUYN010000000
VERSION     DASUYN010000128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2699)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2699)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2699
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1363401"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1173
                     /gene="glp"
                     /locus_tag="VF061_02470"
     CDS             <1..1173
                     /gene="glp"
                     /locus_tag="VF061_02470"
                     /inference="COORDINATES: protein motif:HMM:NF045515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1990586 - divisome complex [Evidence
                     IEA];
                     GO_function: GO:0061599 - molybdopterin molybdotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gephyrin-like molybdotransferase Glp"
                     /protein_id="HEX6668392.1"
                     /translation="LDDALDAVLAEDVVSPLDIPAWTNSAMDGYATRGDDVRGASPDR
                     PVRLTVVEHLPAGRFPTRAIGPGECARIFTGAPLPEGADTVVRQEDTDLGANAVAIFR
                     DRDIGVNIRRAGEDIRKGRTVLRAGSELGPAQLGVLASLAVANPLVYRQPRVAILGSG
                     DEIVDVDQPEEILSGRKTASSNTHTLLAMVRRAGAEPVNLGIARDTPESLREHLARAL
                     DTDLLVTTAGISVGEHDHLRAVLDELGAEQRFWKLRMRPGAPVGFGLLHGIPWIGLPG
                     NPVSTMVTFELFVRPAIRKMAGHPLPFRRTVAVRVAEPIQLKPRLQHFLRAVVSDGPD
                     GPAARLTGPQGSGILTSMIAANALLVVPEGQFETPTGATLPAILLDDPVHTAEPGF"
     gene            1271..1816
                     /locus_tag="VF061_02475"
     CDS             1271..1816
                     /locus_tag="VF061_02475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668393.1"
                     /translation="MKSVAVLGLGVIALTAGAFISAGAAAGGVAGRASYFEASVEGGL
                     SARPAGDVAYGVVGDSASGVAAFTITLGGRDSSGAILFTSLDGRRPAPGRYALSDTSG
                     AGGFRALYVGGSAERPTALYRARRGTLEITASSAEHLSGHFSFTGAGFMAADPSDEGS
                     EVMVAGAFMSTRAPASRPVHP"
     gene            1989..2456
                     /locus_tag="VF061_02480"
     CDS             1989..2456
                     /locus_tag="VF061_02480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668394.1"
                     /translation="MLSHSFRRLAGTAFTALALTTAACGGDGDSTGPAPAPADVSGIY
                     DLTGMRTLGNLGGGGSGLPVTFTDGGGSTLKFESGQLELLADGTYWLEVEAEFNGGGV
                     TMTDEGVYEVSGNAIDFTPDGDPARMRDGIVSGSSITAETQFGGIPFEIDLAK"
     gene            2460..>2699
                     /locus_tag="VF061_02485"
     CDS             2460..>2699
                     /locus_tag="VF061_02485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668395.1"
                     /translation="MTMPEATDPMMHATPVERATVAGRYELVGVNGGLLPVALDADDA
                     GTEMPGCSVLAGELRLEGDGTFVLELTARIDLPAGG"
BASE COUNT          375 a          957 c          974 g          393 t
ORIGIN      
        1 ctggacgacg cactcgacgc ggtgctggcc gaggacgtcg tcagtccact ggatatcccc
       61 gcctggacca actccgccat ggacggctac gccacccgcg gcgacgacgt gcgcggggcg
      121 tcgccggacc gtccggtccg cctcaccgtg gtggagcacc tgcccgccgg tcgcttcccc
      181 acccgcgcca tcggcccggg cgagtgcgcc cgcatcttca ccggcgctcc gctgccggag
      241 ggggccgata cggtcgtgcg tcaggaggac accgacctgg gcgcgaacgc cgtcgccatc
      301 ttcagggacc gcgacatcgg ggtgaatatc cggcgcgcgg gcgaggacat ccgcaagggc
      361 cggacggtgc tccgggcagg cagcgagctg gggccggccc agctgggtgt gctcgcatcg
      421 ttggcggtgg cgaatccgct ggtctaccgg cagccgcgcg tcgcgatcct cggcagcggc
      481 gacgagatcg tggacgtgga ccagccggag gagatcctca gcggccggaa gaccgcgagc
      541 agcaataccc acaccttgct cgcgatggtg cggcgtgccg gcgcggagcc ggtgaacctg
      601 ggcatcgcgc gggacacccc cgagagcctg agggagcacc tggcccgcgc gctcgacacg
      661 gacctgctgg tgaccactgc cggcatcagc gtcggcgagc acgaccacct gcgcgccgtc
      721 ctggacgagc tcggcgccga gcagcggttc tggaagctgc ggatgcggcc gggcgcgccg
      781 gtcgggttcg gattgctcca cggtatcccc tggatcgggc tgccgggcaa cccggtgagc
      841 acgatggtca cattcgagct cttcgtccgg ccggcgatcc ggaagatggc cgggcatccc
      901 ctgcccttcc gccgcacggt ggcggtgcgg gtcgcggagc cgattcagct caagccgcgg
      961 ctacagcact tcctgcgcgc cgtcgtctcc gatgggccgg acggtcccgc ggcgcggctc
     1021 accggccccc aggggtccgg catcctcact tccatgatcg cggccaacgc cctcctcgtg
     1081 gtgccggaag gccagttcga gacgccgacg ggtgccacct tgccggccat cctcctcgac
     1141 gatccggttc acaccgccga acccggcttc tgacccccga tgagatcggg ttgagatcgg
     1201 ggtgaatccc caccggtagt cttggcccgt cgcaacgaca cgacggtcct caacttctcg
     1261 ggggtgcacc atgaagtcgg tagctgtgct gggcctgggc gtcatcgcgc tgacggcggg
     1321 cgcgttcatc tcggcgggag cggcggcagg gggcgtggcg ggacgggcat cctacttcga
     1381 ggcatcggtc gagggaggcc tgagcgcccg gccggcgggc gacgtcgcct acggcgtcgt
     1441 gggtgacagc gcgagtggcg tcgcggcctt caccatcacg ctgggcggcc gggactcctc
     1501 cggtgcgatc ctcttcacca gcctcgacgg tcgacgcccc gcgcccgggc ggtacgcgct
     1561 gagcgacaca tccggggccg gcgggttccg tgcgctctac gtcggcggca gcgccgagcg
     1621 gcctacggcg ttgtaccggg ccaggcgcgg cacgctggag atcacggcct cgagcgccga
     1681 gcatctcagc ggccacttca gcttcaccgg tgccggcttc atggccgccg atccttcgga
     1741 cgaggggtcc gaggtgatgg tcgccggcgc cttcatgtcc acccgagctc cggcgagccg
     1801 gccggtccac ccctgagtcc ggagggaggc agagccgcgc ccggcgggcc ccgcgcccgc
     1861 cgggcgctcg tgtgtccatc cggtgtcggg cccaggtgag atcgcgatga gatcggggtg
     1921 aatgccgtgg cctatcgttg cgcatcgatc gggcaggcac actcacccac gctctggagg
     1981 acagaccgat gctctcgcac tcctttcgcc ggctcgccgg caccgctttc accgcgctcg
     2041 ccctgaccac cgccgcctgc ggcggcgacg gtgattcgac cgggcccgcg cccgcgcccg
     2101 ccgacgtgag cggcatctac gacctgaccg gcatgcgtac gctgggcaac ctgggcggtg
     2161 gaggcagcgg tcttcccgtg accttcaccg atggcggcgg ctcgaccctc aagttcgaga
     2221 gcggccagct ggagctcctg gccgacggga cctactggct cgaggtcgag gccgagttca
     2281 acggcggcgg cgtcaccatg acggacgagg gggtctacga ggtcagcggg aatgccatcg
     2341 acttcacgcc cgacggcgat cccgcgcgca tgcgggacgg catcgtgagc ggcagctcga
     2401 tcaccgcgga gacgcagttc ggcggcattc ccttcgagat cgatctggcg aagtaggtga
     2461 tgaccatgcc cgaagcgacc gaccccatga tgcacgccac cccggtggag cgcgcgacgg
     2521 tggccggtcg ctacgagctg gtcggtgtca acggcggtct gctgccggtg gcactggacg
     2581 cggacgacgc ggggacggag atgccgggct gcagtgtcct cgccggtgag ctgcggctgg
     2641 agggggacgg caccttcgtc ctcgagctca ccgcccgcat cgatctcccc gcgggcggc
//
LOCUS       DASUYN010000129         5380 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_923712, whole genome shotgun sequence.
ACCESSION   DASUYN010000129 DASUYN010000000
VERSION     DASUYN010000129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5380)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5380)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5380
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_923712"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1059)
                     /locus_tag="VF061_02490"
     CDS             complement(<1..1059)
                     /locus_tag="VF061_02490"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX6668396.1"
                     /translation="MRRDLSRLEGDEHDLLVIGAGIQGACIAWDAALRGLRVALVERD
                     DFGAATSANSLRIIHGGLRYLARGDFPRMRESIRERAALLRVAPGLVEPLPVLVPTGP
                     PGVPPKLALGAALVLTHLLSPGRNRDLHPGRHIGAGRLLSRAECLALAPALGTSPVSG
                     GALWYDARMVRPERLTLAFVRSAASKGAVVANYGEADTFEVVDGVVRSVEVVDRLRGT
                     RHSVRARQIVIAAGPWTEELATRTGRQPALPAGEPGLALGLNLVVGRRLADAAVGLRA
                     GSSSAADPGGSGGRFLFMVPQERSTLLGTWYEVADGSDPGGALDRGEEFLLAAFNRAC
                     PGLRLSRDDVVGRQAGRLP"
     gene            complement(1072..2085)
                     /locus_tag="VF061_02495"
     CDS             complement(1072..2085)
                     /locus_tag="VF061_02495"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX6668397.1"
                     /translation="MQPSLQPSRGSGADPRFVSVVVPVVERADDLVDLYRSFSAELDA
                     HGEEYEFVFVFDGGFAPPAELLAQSQQRENLRLLRFARAFGETAALRLGIERSRGDVI
                     LTLPAYFQVTPAGVTTLLAALNEETDLVVANRSPRIDGWLNRVQSVAFSRMIAGVTDR
                     PFHDIACGVRVMRRSVAEGLPLYGDLHRFIPALALREGYRVTEAAVPQHPGNARTRLY
                     GPGVYARRLLDIAAFFFLAKFTEKPLRFFGLVGSGFFAAGAITSLVLLVNRLQGQGIA
                     NRPLLLLAVLLIALGVQLMGLGLVGEIIVHLRAPHHRAYRVRERTDAGDSGHTRSTGA
                     GPA"
     gene            complement(2105..3079)
                     /locus_tag="VF061_02500"
     CDS             complement(2105..3079)
                     /locus_tag="VF061_02500"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX6668398.1"
                     /translation="MVPEARTARSGGRLDLSVVAPLYNESQNVAPLVEWILEALGTYP
                     GTFEVILVDDGSRDDTWERVEAASLADPRIRGIALGRNVGQTAAMMAGFDHARGRVVV
                     SLDGDLQNDPRDIPALLGKLEEGYDLVCGWRQRRQDKFLLRKVPSWVANRIIRRLTGV
                     QITDNGCSLKAYRRELLDRISLYAEQHRFIPALSASVGARITEMPVRHHARRFGESKY
                     GISRTVKVLVDLLTLKMITTFRSRPLVGFGTLAVPMLLGSLLFTVMAVVAASEFQPSK
                     AEALVFPGSALICAGAAFYLLMLGLVSEVALHAERESANEIPTAWEVR"
     gene            complement(3306..4064)
                     /locus_tag="VF061_02505"
     CDS             complement(3306..4064)
                     /locus_tag="VF061_02505"
                     /inference="COORDINATES: protein motif:HMM:NF014453.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HEX6668399.1"
                     /translation="MISRRTDALVERTGSPAAMAPAREERPDASEVNAAAERGLGARV
                     SRVVNFALAACALFLALPLLLLIAIVVKLTSRGPVLYTQERVGLDRRIPGVDAGNHRR
                     VRDIGGKPFTIYKFRTMRVDAEAQSGAVWAAQNDPRVTPVGRFLRQYRLDEIPQLLNV
                     MRGEMNIVGPRPERPTIFAELREHIQEYPLRQRAKPGITGLAQIYHHYDRSMDDVRTK
                     VRFDLEYIRRRSLWEDLRIMLRTIPVVFLRRGGW"
     gene            complement(4291..4437)
                     /locus_tag="VF061_02510"
     CDS             complement(4291..4437)
                     /locus_tag="VF061_02510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668400.1"
                     /translation="MSLTLLAAVTSLIAWVVLVFFTPMSAGAIHLLLALGCTLLVRWW
                     ALRA"
     gene            4742..5155
                     /locus_tag="VF061_02515"
     CDS             4742..5155
                     /locus_tag="VF061_02515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase"
                     /protein_id="HEX6668401.1"
                     /translation="MPRASVTRKVHFNAAHRVHNPKFSEQWNQEMFGLCNNPNYHGHN
                     YELELTVEGEIDPDTGYVLDLNKLKQIAEERILRHLDHKNLNLDVEWFRDLIPTSENV
                     ALVCWRELRAALPETLTLRLRLWETPRNYVDYQGA"
     gene            5133..>5380
                     /locus_tag="VF061_02520"
     CDS             5133..>5380
                     /locus_tag="VF061_02520"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: protein motif:HMM:NF013398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I"
                     /protein_id="HEX6668402.1"
                     /translation="MSTIKAREDRTRVTHPGEKSPHLEPFADKVRAILAALGENPGRE
                     GLLKTPERVESSLRWLTQGYRMSVEDAVGDAVFEETHQ"
BASE COUNT          904 a         1851 c         1856 g          769 t
ORIGIN      
        1 cgggaggcga ccggcctgtc ggcccacgac atcatcgcgg ctgagccgaa gcccgggaca
       61 ggcccgattg aacgccgcca gcaggaactc ctcgccccga tcgagagcgc caccagggtc
      121 gcttccgtcc gccacctcgt accaggtccc cagcagcgtg cttcgctcct gcggcaccat
      181 gaacaggaac cggccgcccg agccgcccgg atccgccgcc gacgaagagc cggcgcgaag
      241 ccccacggcc gcgtccgcca accggcggcc gacgaccaga ttcaggccga gcgccagccc
      301 gggctcgccc gccggaagcg ccggctgccg tcccgtccgg gtcgccagct cctcggtcca
      361 ggggcccgcg gcgatcacga tctgccgggc ccggaccgag tgccgcgtcc cccgcagacg
      421 gtccacgacc tccaccgagc gcacgacgcc gtccaccacc tcgaaggtat ccgcctcccc
      481 gtagttggcg accaccgccc ccttggacgc ggcggagcgc acgaaggcga gcgtgagccg
      541 ctcggggcga accatccggg cgtcgtacca gagggcaccg ccgctgaccg gcgaggtgcc
      601 gagtgccggg gccagggcca ggcactcggc gcgggagagc agccgccccg cgccgatgtg
      661 ccggccggga tggaggtcgc ggttccgccc gggggaaagc aggtgggtga ggaccagcgc
      721 ggccccgagg gcgagcttcg gggggactcc cgggggcccg gtgggaacga gcaccgggag
      781 gggctcgacc agtcccggcg cgacgcgcag gagagcggca cgctcgcgga tggactcccg
      841 catccgcggg aagtcgcccc gcgcgagata acgaaggccg ccgtggatga tccggaggct
      901 gttggccgag gtggccgctc cgaagtcgtc gcgctccacc agggcgacgc gcaacccccg
      961 cagggcggcg tcccaggcga tgcatgcccc ctgaatgccg gcaccgatga cgagaaggtc
     1021 gtgctcgtca ccctccagcc ggctcaggtc cctccgcatg agccccgccg ctcaggccgg
     1081 ccctgcgcct gtcgaacggg tgtgcccgga gtctccggca tcggtccgct cgcggacccg
     1141 gtaggcccgg tggtgcggcg cgcgcaggtg tacgatgatc tcaccgacca ggccgagccc
     1201 catcagctgt acgcccagcg cgatcaggag gaccgccagc agcagcaggg gccggttggc
     1261 gatcccctgg ccctgcagcc ggttcaccag cagcaccagc gaggtgatcg cgccggcggc
     1321 gaagaacccg ctgccgacca gcccgaagaa gcggagcggc ttctccgtga acttggccag
     1381 gaagaagaac gccgcgatgt ccagcagccg gcgcgcatat acgcccgggc cgtacagccg
     1441 ggtgcgtgcg ttgccggggt gctgcggtac cgccgcctcg gtgacccggt agccctcgcg
     1501 cagcgcgagc gccgggatga accggtgcag gtcgccgtag agcgggagtc cctccgccac
     1561 gctccggcgc atcacccgca cgccgcaggc gatgtcgtgg aacggccggt cggtcactcc
     1621 cgcgatcatg cggctgaagg cgaccgactg cacccggttg agccagccgt cgatcctggg
     1681 agagcggttg gccacgacga ggtcggtctc ctcgttcagc gcggcgagga gcgtggtcac
     1741 ccccgcgggg gtgacctgga agtacgcggg cagcgtcagg atgacgtcgc cgcgactccg
     1801 ctcgatcccc agccggagcg cggcggtctc gccgaacgcg cgggcgaagc ggagcagccg
     1861 gaggttctcc cgctgctgac tctgcgccag gagctccgcg ggcggggcga agccgccgtc
     1921 gaacacgaag acgaactcgt attcctcgcc gtgggcgtcg agctcggcgg agaagctccg
     1981 gtagagatcc acgagatcgt cggctcgctc caccacgggc acgaccacgg agacgaacct
     2041 gggatccgcg ccggacccgc gggacggctg gagagacggt tgcatcagcg caccctgccc
     2101 catgtcaacg aacctcccag gcggtcggaa tctcgttagc gctctcccgc tcggcgtgca
     2161 gcgccacctc ggacaccagg ccgagcatga ggaggtagaa cgcggccccg gcacagatca
     2221 gcgcggagcc gggaaacacc agcgcctcgg ccttcgaggg ctggaactcc gaggccgcca
     2281 ccacggccat gaccgtgaag agcagactcc cgagcagcat cggcacggcc agggtgccga
     2341 agcccaccag cggacgcgac cggaaggtgg tgatcatctt cagcgtgagc aggtccacca
     2401 gcaccttcac cgtgcgggaa atgccgtact tgctctcccc gaaccggcgg gcgtggtgcc
     2461 gcaccggcat ctccgtgatc cgggctccga cactggcgct caaggcgggg atgaaccggt
     2521 gctgctcggc atacagcgag atccggtcca acagctcccg gcggtaggcc ttgagtgagc
     2581 agccgttgtc ggtgatctgc acgccggtga gtcggcggat gatgcggttg gccacccagg
     2641 acggcacctt ccgcaggagg aacttgtcct gccgccgctg ccgccagccg cagaccaggt
     2701 cgtagccctc ctcgagcttg cccagcagcg cggggatgtc ccgcgggtcg ttctgaaggt
     2761 cgccatcgag ggacaccacc acccggcccc gcgcgtggtc gaatcccgcc atcatcgcgg
     2821 ccgtctgccc cacgttgcgg cccagcgcga tgccccggat tctgggatcg gccagggagg
     2881 ccgcctccac ccgctcccag gtgtcgtcgc ggctgccgtc gtccaccagg atcacctcga
     2941 aggtgcccgg ataggtgccg agcgcctcca ggatccactc gaccaggggg gcgacgttct
     3001 gggactcgtt gtacagcggc gcgacgaccg agaggtcgag ccgacctccg gaccgcgccg
     3061 tcctggcttc tgggaccatt ccccgtgctt tcccgtcagg agaccgattg caagatattg
     3121 ccccgcgcgg tggcttacca gcaatccgcg ttccgccgca ccgcgcctgg ccgcggctct
     3181 acaagttcaa gcgagcggct tggttgcgca cgaggatcgg agcccggact ggtggtcggg
     3241 ccctgcagga tcacacgggc gtggctaagg gaagcggcgc aggctcgaca cccgggctgg
     3301 ggcgctcacc agcctccgcg ccggaggaag acgaccggaa tcgtacggag catgatacgg
     3361 aggtcctccc acaggctccg ccgccggatg tactcgaggt cgaagcgcac cttggtgcgc
     3421 acatcgtcca tcgagcggtc gtagtggtgg tagatctggg ccaggccggt gattcccggc
     3481 ttggcccgct gccgcagggg gtattcctgg atgtgctccc gcagctcggc gaagatcgtg
     3541 ggccgctccg gccggggacc cacgatgttc atctcgcccc gcatcacgtt gagcagctgg
     3601 gggatctcat ccagccggta ctggcgcagg aagcggccca cgggcgtgac ccgggggtcg
     3661 ttctgcgcgg cccacaccgc gccgctctgg gcctcggcgt ccacccgcat cgtccggaac
     3721 ttgtagatcg tgaacggctt cccgccgatg tcacgaaccc gccgatgatt gcccgcgtcc
     3781 acgcccggaa tgcgccggtc aagtccgacg cgctcctggg tgtagagcac ggggccgcgc
     3841 gaggtgagct tgaccacgat cgcgatgagc aggaggaggg gcagtgccag gaacagcgca
     3901 caggccgcga gcgcgaagtt gacgacccgg ctgactcgcg ctccgagccc gcgctcggcc
     3961 gccgcgttca cctccgacgc gtccggtcgc tcctcgcgcg cgggcgccat cgcggcgggc
     4021 gagccggtac gttccaccag cgcatcggtc cggcgggaga tcacgtggtt cttccagttc
     4081 ctgtggcgaa ggagtttggg tgctgccgtt tcggcctgaa ggatttcgca cgatccatgc
     4141 ccccggcata ggggggtgaa aaagctgtca ctagttcatc taaaatgtta ttaattaata
     4201 cgttgccgct tttgattgaa gtgttttcga ggttgggtga ccgcgggcgt gtggtaaatc
     4261 gcctacatgg gcgtcgcctg gagcgacaaa ttacgctcgc aaggcccacc agcggaccag
     4321 cagggtacag ccgagggcga gcagcaggtg gatggcgccg gcgctcatcg gcgtgaagaa
     4381 gaccagcacg acccacgcga tcagcgaggt gaccgcggcg agcagggtga gggacatgga
     4441 ggtctcccgg cggaggaatg agtgacaggc gctcgagcgc gttgacggcc atcaggcggg
     4501 ttcctatctt atcatcggcg gtgacgggga gccacattat tgagccaaca ggtccgatga
     4561 tgggcccgaa tgccgtggcg gatgtcatgc ccctcggggg aaggcagaag tcaaggtgag
     4621 ggcgccgagc attctcattg ggcttcaata atcctcttcg ttgccgttcc agacgccgat
     4681 ctcctcacgg gggtcggcgt tttgttgcga cacccctcgg gaccccccat ctttcccagc
     4741 catgcccaga gcgagcgtca cccgcaaggt ccacttcaac gcggcccacc gggtgcacaa
     4801 ccccaagttt tccgagcaat ggaatcagga gatgttcggt ttgtgtaaca atccgaacta
     4861 tcatggccac aattacgagc tcgagctcac ggtcgagggc gagatcgacc ccgataccgg
     4921 gtacgtcctc gacctgaaca agctgaagca gatcgccgag gagcggattc tgcgccacct
     4981 cgaccacaag aatctgaacc tggacgtgga gtggttcagg gaccttattc ccacctccga
     5041 gaacgtcgct ctggtctgct ggcgcgagct gcgggcggcc ctgcccgaga cgctgaccct
     5101 ccgcctgcgg ctctgggaga cgccgaggaa ctatgtcgac tatcaaggcg cgtgaggacc
     5161 gcacgcgggt gacgcacccc ggggagaagt ccccccatct ggagcccttc gccgacaagg
     5221 tgcgggccat cctcgccgcg ctgggcgaga atccggggcg ggaggggctg ctcaagaccc
     5281 cggaacgggt ggagtcgtcg ctccgctggc tcacccaggg gtatcggatg tcggtggagg
     5341 acgccgtcgg cgacgccgtc ttcgaggaga cccaccagag
//
LOCUS       DASUYN010000130         2090 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1144457, whole genome shotgun sequence.
ACCESSION   DASUYN010000130 DASUYN010000000
VERSION     DASUYN010000130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2090)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2090)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2090
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1144457"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..255
                     /locus_tag="VF061_02525"
     CDS             <1..255
                     /locus_tag="VF061_02525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668403.1"
                     /translation="TYLLFLPMKSLQEVDLAQESHGKPYGDALGDAGRRQLQEFARTG
                     VASSETKLLAFSPKMSYPSDEWVAQDPEFWRPKAVTAAAP"
     gene            complement(274..786)
                     /locus_tag="VF061_02530"
     CDS             complement(274..786)
                     /locus_tag="VF061_02530"
                     /inference="COORDINATES: protein motif:HMM:TIGR00177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MogA/MoaB family molybdenum cofactor
                     biosynthesis protein"
                     /protein_id="HEX6668404.1"
                     /translation="MPGYILPTMALRLAILTISDAGSRGERADTSGDAIAAWAADKGY
                     RIADRGLVPDETGRIAGVLAAWADADTADLILTTGGTGLTPRDVTPEATRAVLDREAP
                     GIAEALRVSVFPRFPRAALSRGLAGVRGTTLIVNLPGSPGGVKDGLAVLDGIVDHAVE
                     LVRGERTGHG"
     gene            839..>2090
                     /locus_tag="VF061_02535"
     CDS             839..>2090
                     /locus_tag="VF061_02535"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX6668405.1"
                     /translation="MESAVALAEALRDRYALERELGAGGMATVYLARDLKHHRQVALK
                     VLRPELAAVIGAKRFLQEIETTANLQHPHILPLHDSGEVGGTAYYVMPYVEGESLRDR
                     LRRDKQLPIDVAVRIAVEVASALDYAHRKGVIHRDIKPENILLHEGQALVADFGIALA
                     MSAAGGTRMTETGLSLGTPHYMSPEQAMGEREITGRSDVYALGCVLYEMLAGDPPFTG
                     STAQAIVAQVVTETPRPLMPRRHTIPPHLEAAVLRALEKLPADRFATPAEFARALATA
                     PAPVPPLPAPLALRSRRPAIFGIVALGMILLVAGLAWYLTRPRGGARPLVASLLPPPG
                     CDFDFVGTSNLVQLSPDGSRLAFVAVCGEDRSIWVRAMDTGENRQLGGTAGASYPFWS
                     ADGRSLGFFSAERLKRIEVDGGAIR"
BASE COUNT          304 a          746 c          746 g          294 t
ORIGIN      
        1 acctacctgt tgttcctgcc gatgaagtcc ctccaggagg tggacctggc gcaggagagc
       61 cacgggaagc cctacggcga cgcgctggga gatgcggggc ggcgacagtt gcaggagttc
      121 gcccgcaccg gggtggcgtc cagcgagacg aaactcctgg cgttcagtcc caagatgagc
      181 tacccatccg acgagtgggt ggcccaggac ccggagttct ggcgccccaa ggcggtgacg
      241 gccgcggcgc cctgacgggc actcgcgacg ccgctacccg tggccggttc gctcgccccg
      301 gaccagctct acggcgtggt ctacgattcc atcgagcacc gccagcccgt ccttcacacc
      361 gccggggctg ccggggaggt tgacgatcag ggtcgtcccg cggacgccgg ccagtccgcg
      421 ggacagcgcg gcgcgaggaa accggggaaa cacgctgacc cgtaacgctt cggcgatgcc
      481 cggcgcctca cggtccagga cggcccgggt ggcctcggga gtgacatcgc gaggggtgag
      541 cccggtgccg ccggtggtga ggatgagatc ggccgtatcg gcgtcggccc acgcggcgag
      601 caccccggcg atgcggccgg tctcgtccgg caccaggcca cggtcggcaa tccgataccc
      661 cttgtccgcc gcccacgcgg cgatcgcgtc accggaggtg tccgcgcgct cgccgcggct
      721 gccggcgtcg gagatggtga ggatggcgag gcggagcgcc atggtaggga gaatgtagcc
      781 gggcactggc agttccgccg ccaacctgca gattctcggg agctccgaga ggtcattcat
      841 ggaatcagcc gtcgccctgg ccgaggcgtt gcgcgaccgc tacgcgctgg agcgcgagct
      901 gggcgcgggc gggatggcga ccgtctacct ggcccgtgac ctgaagcacc accgccaggt
      961 cgccctcaag gtgctgcgcc ccgagctcgc cgcagtgatc ggtgccaagc gattcctgca
     1021 ggagatcgag accaccgcca acctgcagca cccccacatc cttccgctcc acgactcggg
     1081 tgaggtgggc ggcaccgcct actacgtcat gccctacgtg gagggcgagt cgctgcgcga
     1141 ccggctccgc cgggacaagc agctccccat cgacgtcgcc gtgcggatcg ccgtcgaggt
     1201 ggcgagtgcg ctcgattacg cgcaccgcaa gggggtcatt caccgggaca tcaagccgga
     1261 gaacatcctg ctgcacgagg gccaggcgct ggtggcggac ttcggcatcg cgctggccat
     1321 gagcgccgcc ggcggtaccc gcatgaccga gacggggctc agcctcggca ccccgcatta
     1381 catgagtccc gagcaggcca tgggcgagcg ggagatcacc gggcgctccg acgtgtacgc
     1441 gctcggctgc gtgctgtacg agatgctcgc gggcgaccca ccgttcaccg gctccaccgc
     1501 gcaagcgatc gtggcccagg tggtcaccga gaccccccgc cccctgatgc cccggcggca
     1561 taccattccg ccgcatctcg aggccgcggt gctgcgggcg ctggagaagc tgcccgccga
     1621 ccggttcgcc acgccggccg agttcgcccg ggcgctggcg acggcgccag ccccggtccc
     1681 tccactgccg gcgccccttg cgctgcggtc acggcgtccc gcgatcttcg ggatcgtggc
     1741 gctgggcatg atcctcctgg tggcgggact ggcctggtac ctcacccggc cgcggggcgg
     1801 ggcgcggccc ctcgtggcga gcttgctgcc tccgcccggc tgcgacttcg acttcgtggg
     1861 caccagcaac ctggtccagc tctcccccga cggcagccgg ctcgccttcg tcgccgtctg
     1921 cggcgaggac agatccatct gggtccgggc gatggacacc ggggaaaacc gccagctcgg
     1981 aggcaccgcc ggggcgagct atcccttctg gtcggcggac gggcgcagcc tgggattctt
     2041 ctccgccgag cggctcaagc ggatcgaagt ggacggcggg gcgatccggg
//
LOCUS       DASUYN010000131         2712 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_42354, whole genome shotgun sequence.
ACCESSION   DASUYN010000131 DASUYN010000000
VERSION     DASUYN010000131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2712)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2712)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2712
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42354"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..424
                     /locus_tag="VF061_02540"
     CDS             <1..424
                     /locus_tag="VF061_02540"
                     /inference="COORDINATES: protein motif:HMM:NF013199.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PQQ-dependent dehydrogenase, methanol/ethanol
                     family"
                     /protein_id="HEX6668406.1"
                     /translation="GHRGRFISWDPMKGKVNWEIKENLAAYGGALTTASGLVFYGTME
                     GWLKAVDQKSGKVLWQYKTPSGIIGNPMTYNAPDGQQYVAVYSGIGGWAGIGVAAGIG
                     AEDPTAGLGALGAFGDAGQFSNQGGVMTVFGLKNMAVK"
     gene            592..1509
                     /locus_tag="VF061_02545"
     CDS             592..1509
                     /locus_tag="VF061_02545"
                     /inference="COORDINATES: protein motif:HMM:TIGR03871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinoprotein dehydrogenase-associated putative
                     ABC transporter substrate-binding protein"
                     /protein_id="HEX6668407.1"
                     /translation="MLRALNLRSLLLAGALGAAVAVPATAQRPSPPQPGLLRVCNDPD
                     NMPFSNQKEEGFENKIAQLIAKEWNAKLQYVWYPTRRGYFRILNGMYCDLIIQAPGGL
                     DMAGTTDPYYRSGYVFVTRQDSKLADIKSLADPRLKKARIGVTLLPSDEQLPPTMALS
                     HYGVVGNLRGYHGWYNDDDRPEDVVNAVANDSVDLAIVWGPLAGYFAKRSQVPLKLTP
                     LGERDSLADVPFRYDIAMAVRRRDRELRDSLQKTLKAKGPEIQAILKEYNIPMFPVTA
                     SGGDDDDDGPRKPAATPTPGDTSRTARKG"
     gene            1594..2031
                     /locus_tag="VF061_02550"
     CDS             1594..2031
                     /locus_tag="VF061_02550"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEX6668408.1"
                     /translation="MRTPLSATLRRLVSGAGVVLAATAFGPRAEAQEVRDQWHQAPRD
                     TVTQEVYDGWKQYNLNCARCHGEDVLGSTIAPHLVTSLKPDGPIPTKEAFLQVVCAGR
                     PEKGMPAWCALGMDPGTIEKIYAYVKARSDAKMAPGRPARRDG"
     gene            2253..>2712
                     /locus_tag="VF061_02555"
     CDS             2253..>2712
                     /locus_tag="VF061_02555"
                     /inference="COORDINATES: protein motif:HMM:NF024986.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HEX6668409.1"
                     /translation="MGTAVIAGLWMAGLLHSVAPMPAGGLPHGPVAVDTPTVRLDAAQ
                     LAQRLADAGDTGTPDLAGADLSGLDLSGVDFKRANLTGARLAGTKLAGANLFSCDLTD
                     AVASDAVLTRANLDGTVLRRADFRRANFQGSSLFATILEQTNLAGANLAGT"
BASE COUNT          446 a          945 c          920 g          401 t
ORIGIN      
        1 tggtcaccgc ggccggttca tctcctggga tccgatgaag ggcaaggtca actgggagat
       61 caaggagaac ctcgcggcct acggcggcgc gcttacgacc gccagcggcc tggtcttcta
      121 cggcaccatg gaaggctggc tgaaggccgt cgaccagaag agcggcaagg tcctctggca
      181 gtacaagacc ccgtcgggca tcatcggcaa cccgatgacc tacaacgcgc ctgacggcca
      241 gcagtacgtc gcggtgtact ccggcatcgg tggctgggcc ggcatcggcg tggccgctgg
      301 tatcggcgcc gaggatccga ccgccggtct gggcgcgctc ggcgcgttcg gcgacgcggg
      361 ccagttcagc aaccagggcg gtgtcatgac cgtcttcggg ctcaagaata tggcagtcaa
      421 gtaagcagcg tagaaagggc cggagggatt tcctccggcc ccggcagggc tacatttcat
      481 gcagtgcacg gcgccggggt gctgtccgct ccggcgccgt tcgttccacc gtgggagccg
      541 cccgggtccg cccccgggac cgggtggccc cccagagcga caggttgtgc catgctccga
      601 gcgttgaacc ttcgatccct cctgctggcc ggcgctctcg gcgcggcggt cgccgtgccc
      661 gccaccgccc agcggccgag cccgccccag ccgggcctgc tccgggtctg caacgacccc
      721 gacaacatgc cgttctcgaa ccagaaggaa gaggggttcg agaacaagat cgcccagctc
      781 atcgccaagg agtggaacgc caagctccag tacgtctggt atccgacccg ccgcggctac
      841 ttccggatcc tcaacgggat gtactgcgac ctcatcatcc aggcgccggg cggtctcgat
      901 atggcgggca ccaccgaccc gtactaccgc tcgggctacg tgttcgtcac ccgccaggac
      961 agcaagctcg cggacatcaa atcgctggcc gacccccgac tcaagaaggc gcgcatcggc
     1021 gtgacgctcc tcccctccga cgagcaactg ccgcccacca tggcgttgag ccattatggg
     1081 gtggtcggca atctccgcgg ctatcacggg tggtacaacg atgacgaccg ccccgaggac
     1141 gtcgtcaacg cggtcgcgaa cgacagcgtg gacctggcca tcgtctgggg gccgctcgcc
     1201 ggctacttcg ccaagcggtc gcaggtgccc ctcaagctca cgcccctcgg cgagcgcgat
     1261 tcgctggccg acgtcccctt ccgctacgac atcgccatgg cggtgaggcg gcgcgaccgg
     1321 gagctgcggg acagcctgca gaagacgctg aaggcgaaag gacccgagat ccaggcgatc
     1381 ctcaaggagt acaacatccc gatgttcccc gtcaccgcga gcggtggcga cgatgacgac
     1441 gacggaccgc gcaagccggc ggccacgccg actccggggg acacctcgcg caccgcgcgt
     1501 aagggctgaa gcacctcacc tcgatcatca accctcgccg gccgagcggt cggcgttacc
     1561 gatcctatac gctcgaaagg accgtccgac agcatgcgca cacctctctc cgccaccctg
     1621 cgccggctgg tttcgggtgc cggcgtcgtc ctggccgcca cggcgttcgg cccccgggcc
     1681 gaagcccagg aggtccgcga ccagtggcat caggctcccc gcgatacggt cacgcaggaa
     1741 gtgtacgacg gctggaagca gtacaacctc aactgcgctc gttgccacgg ggaagacgtg
     1801 ctgggctcca ccatcgcccc gcacctggtg acctcgctca agcccgatgg tccgatcccg
     1861 accaaggagg ccttccttca ggtggtctgc gcgggccgcc cggagaaggg gatgccggcg
     1921 tggtgcgcgc tgggcatgga cccggggacg atcgagaaga tctacgcgta cgtgaaggcc
     1981 cggagcgacg cgaagatggc gccggggagg ccggcgcgac gagacggctg acgggccgaa
     2041 cggcggggag acgtgaaggt gaagtggggg gccccattcg gcggccccct ttcccttttg
     2101 accgctcggc tttcccggct ctggcccgtg acctcaccgc gtctgatgcg tattcgttgt
     2161 aatggccatt cggctcgggc gcggatatgt tgacgaattg gccccgaccg gggatggcgg
     2221 ggccggttca ccctgtttcc ggtgaggcgc cgatgggcac agcagtcatc gctgggctgt
     2281 ggatggcggg tctcctgcac tcggtcgctc ccatgccggc cggcggcctc ccgcacggcc
     2341 cggtggcggt ggacacgccg accgtgcggc tcgatgcggc tcagctggcc cagcggctgg
     2401 ccgacgcggg tgatacgggg acgccagacc tcgccggcgc agatctgagc ggactcgacc
     2461 tgagcggggt ggacttcaag cgcgcgaacc tcaccggcgc ccggctggcg ggcaccaagc
     2521 tggcgggggc caatctcttc agctgcgacc tgaccgacgc ggtggccagc gacgcggtgc
     2581 tgacccgcgc gaacctggac ggcacggtgc tgcggcgggc cgacttccgg cgcgccaact
     2641 tccagggctc cagcctcttt gccaccatcc tggagcagac caacctggcg ggcgcgaacc
     2701 tcgcgggcac cc
//
LOCUS       DASUYN010000132         2283 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_703780, whole genome shotgun sequence.
ACCESSION   DASUYN010000132 DASUYN010000000
VERSION     DASUYN010000132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2283)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2283)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2283
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_703780"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..521)
                     /locus_tag="VF061_02560"
     CDS             complement(<1..521)
                     /locus_tag="VF061_02560"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016703 - oxidoreductase activity, acting
                     on single donors with incorporation of molecular oxygen,
                     incorporation of one atom of oxygen (internal
                     monooxygenases or internal mixed function oxidases)
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HEX6668410.1"
                     /translation="MTFLAELPVIQAPMAGSQGSALALAVSNAGGLGSLPCALLAPDA
                     IRAELSAITSATGKPYNVNFFVHREPVVDAARESAWRAVLAPYYRELGVNPAAIPPLA
                     GRTRFDEDTAAVLEAFRPPVVSFHFGLPPAALLERVKRWGSKVIASATTIAEARYLEA
                     QGADGIIAQGLEAG"
     gene            686..1291
                     /locus_tag="VF061_02565"
     CDS             686..1291
                     /locus_tag="VF061_02565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668411.1"
                     /translation="MPTCRLLAPSLLAAALGALPAPALLQAQAALPKLSPELAKVRAA
                     LDKYQDPVQAIHDGYFSTLGCVYYPAAGGHGEVAYAPGGMGVHFLNPALVGPQVDPAK
                     PQVLLYEPQGDKLRLVAAEWFVPLATGVKERPQLHGRPFDGPMEGHPPLLPLALHHYD
                     LHVWLWKENSAGLFSPTNPDVKCPAGAYSFDERAPKIVPHP"
     gene            complement(1322..>2283)
                     /locus_tag="VF061_02570"
     CDS             complement(1322..>2283)
                     /locus_tag="VF061_02570"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX6668412.1"
                     /translation="GVRLDSRAGGYVVVLGVGAAAALLGLVFLARIPEPVMPPATHRP
                     WADIVRAPLRHREFRALMSFLATWTFATHLSTPFFTVYLLRRLAFPMWAVIAFAVLSQ
                     LTAALVLRAWGGVADRFSTLAVLRVSCAGFLLSVAGWPVVGLVGEPGLVVVGVALIHV
                     VAGLSSAGVNLASGTVAMELAPRGAAAGYLATNSLVSGAASALAPVLAGLSADWLESQ
                     RLSVAVNVDLRGLDYLFVATVLVGLVALRLMRAVTERPSPRRRVVLAALMEEMREQMP
                     QPLRAVTTVPTVRDLVYFPFSLLGRLLPERRVTGSRSRSERMS"
BASE COUNT          377 a          841 c          779 g          286 t
ORIGIN      
        1 ccggcctcga gaccctgcgc gatgatcccg tcggccccct gcgcctcgag gtagcgcgcc
       61 tcggcgatcg tggtggccga cgcgatcacc ttcgaccccc agcgcttcac ccgctccagc
      121 agcgccgccg gcggcagccc gaagtgaaag ctgacgaccg gcggccggaa cgcctccagg
      181 accgcggcgg tgtcctcgtc gaagcgggtg cgcccggcca gcggcggaat cgccgccgga
      241 ttcacgccca gctcccggta gtacggcgcg aggacggcgc gccaggccga ttcccgcgcc
      301 gcgtccacca ccggctcgcg atgcacgaag aagttgacgt tgtacggctt cccggtcgcc
      361 gacgtgatcg ccgacagctc ggcccggatc gcgtccggag cgaggagtgc gcacggcagg
      421 gagccgaggc cgcccgcgtt cgacaccgcc agcgcgagcg cgctcccctg cgatccggcc
      481 atcggcgcct ggatgacggg cagctcggcg agaaaggtca tggggttgga ctcgtcttgg
      541 gatccttggg gtgggccacc caatctgcgg accacgggtg accttcgcta cgagctgagg
      601 ccttgcttga cagtcccagt tcccagccgt accgtggctc tcactcctcg acccaatcca
      661 cactcgggtg aaagcagggg tttccgtgcc cacctgccgt ctcctcgctc cgagcctgct
      721 cgcggccgcc ctcggtgcgc ttccggcccc cgccctactc caggcccagg ccgccctccc
      781 aaagctgtca ccggagctgg cgaaggtgcg cgccgccctg gacaagtacc aggaccctgt
      841 ccaggccatt cacgacggct acttctcgac cctggggtgc gtctactacc cggccgcggg
      901 cggccacggg gaggtggcct acgctccggg agggatgggc gtccactttc tgaaccccgc
      961 actggtcggg ccccaagtgg atcccgccaa accccaagtg ctgctctacg agccgcaggg
     1021 cgacaagctg cgcctggtgg cagccgagtg gttcgtgccc ctggccaccg gggtcaaaga
     1081 gcggccgcag ttgcatggcc gaccgttcga cggcccgatg gaggggcatc ccccgctgct
     1141 gcccctggca ctacatcact acgacttgca cgtgtggctt tggaaggaga attcggcggg
     1201 cctcttcagc cctaccaatc cggacgtcaa gtgcccggcg ggggcgtaca gctttgacga
     1261 gcgggcaccc aagatcgtgc cgcaccctta gcggtcgcat caagtcttcc gcagaatcag
     1321 ctcacgacat ccgctcgctc cggctccggc tgcccgtaac ccgccgctcg ggcagcagcc
     1381 ggccgagcag ggagaacgga aagtagacca ggtcgcgcac ggtcgggacc gtcgtgacgg
     1441 cccggagcgg ctgcggcatc tgctcccgca tctcctccat cagcgcggcc aggaccacgc
     1501 gccgcctcgg cgacggccgc tcggtcacgg cccgcatcag ccggagcgcg acgaggccga
     1561 ccaggaccgt ggcgacgaac aggtagtcga gaccccgcag gtccacgttc accgccacgg
     1621 aaagtcgctg ggactccagc cagtcggccg agagcccggc gaggaccggc gcgagggccg
     1681 aggccgctcc ggagacgagg gagttcgtgg cgagatagcc ggcggccgcg ccgcgggggg
     1741 cgagctccat cgccacagtg ccggacgcga gattcacccc cgcgctgctg agaccggcca
     1801 ccacgtggat cagggcgacg cccaccacta ccagcccggg ctcgccgacc agcccgacca
     1861 ccggccatcc ggcgacgctg agcaggaagc ccgcgcagct cacccgaagc accgccagcg
     1921 ttgagaagcg gtcggcgacg ccgccccagg cccggaggac gagggccgcc gtcagctgcg
     1981 agagcacggc gaaggcgatc acggcccaca tgggaaacgc cagccggcgc aggagataga
     2041 cggtgaagaa cggagtcgac aggtgggtgg cgaaggtcca ggtcgcgagg aagctcatca
     2101 gcgcgcggaa ctcgcgatgt ctcagggggg cccgcacgat gtcggcccac ggccggtggg
     2161 tcgcgggtgg catcacgggc tccggaatcc gggccagaaa gacgaggccg agcagcgccg
     2221 ccgccgcgcc gactcccagc accaccacgt agccgccggc gcgcgagtcg agccggacgc
     2281 cca
//
LOCUS       DASUYN010000133         2684 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_703995, whole genome shotgun sequence.
ACCESSION   DASUYN010000133 DASUYN010000000
VERSION     DASUYN010000133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2684)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2684)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2684
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_703995"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..357)
                     /locus_tag="VF061_02575"
     CDS             complement(<1..357)
                     /locus_tag="VF061_02575"
                     /inference="COORDINATES: protein motif:HMM:NF012879.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HEX6668413.1"
                     /translation="MDTVRLDEGLHRTVAPSGLVVYSESLPGVRSAAVGIYVRTASAH
                     EQREQMGISHLLEHMVFKGTERRSARDLALALEVRGGSLDAYTGRDATSYQAHVLDAD
                     VPLAIDILTDLVRRPLL"
     gene            complement(365..2455)
                     /gene="pnp"
                     /locus_tag="VF061_02580"
     CDS             complement(365..2455)
                     /gene="pnp"
                     /locus_tag="VF061_02580"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009567342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HEX6668414.1"
                     /translation="MTAQRIETQFAGRPLLLETGWLAKQAAGSAVVRFGDTMVLAAVT
                     VSPNVSTLPFFPLTVEYREKTYAAGKIPGGFLKREGRPSDKEILASRLIDRSVRPLFP
                     EGFKNEVQVFVTVLSADQENDADILGVVAASTALSLSPVPWNGPLAGVRVGRVEGNWI
                     LNPTFQQLEFSTIDLVVSGSADSVVMVEGGSLEVAEAEILEALKVAQKGIRDLIGLER
                     KLMDKAGAAAKLQWVKAELDPELQGRAQDAAEDAMAQAINASDKAARSAGVKGVKEQV
                     TGALLADYPERGREISGHLEDIEYRVMRKQVLDRGERVDGRDLDTIRPITIQAGVLPR
                     THGSAVFTRGQTQALVSVTLGTTDDEQRIDSIDVAGETTKSFMLHYNFPPYSTGEVKM
                     IRGTSRREIGHGALAERALQPLLPQYEDFPYTLRVVSEILESNGSSSMATVCGGSLAL
                     MDAGVPMKAPCAGVAMGLIKEGDKVAILTDILGSEDHLGDMDFKVAGTERGITSIQMD
                     IKIEGLDLKIMEQALEKARRGRLHILKEMAKALPGPRTELSKYAPRIFTMQIKPDKIG
                     DVIGPKGKTIRGIQDATGAKISIEDSGVVTISAVGGEAGEKARAMVAAITTEPEVGRT
                     YEGPVKSTTAFGAFVEILPGVEGLLHISELQHGRTEKTEDVVKKGDIVQVKLLEVDER
                     GRMKLSRKALLPKD"
     gene            complement(2564..>2684)
                     /locus_tag="VF061_02585"
     CDS             complement(2564..>2684)
                     /locus_tag="VF061_02585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HEX6668415.1"
                     /translation="HGRRGLLKMVGTRRRLLTYLKRSDLQTYRALIEQLGLRH"
BASE COUNT          370 a          931 c          908 g          475 t
ORIGIN      
        1 gagcagcggg cggcgtacca gatcggtgag gatgtcgatg gcgagcggca cgtcggcgtc
       61 cagcacgtgc gcctggtagc tggtggcgtc ccggccggtg taggcgtcca ggctcccacc
      121 gcggacctcg agcgcgagcg ccaggtccct ggcgctccgc cgctcggtgc ccttgaagac
      181 catgtgctcc agcaggtggg agatgcccat ctgctcccgc tgctcgtgcg cgctggcggt
      241 ccggacgtag atcccgaccg ccgccgaccg cacccccggg agcgactcgg agtagaccac
      301 cagcccgctg ggcgcgacgg tccggtgcag cccctcgtcg agacgaaccg tgtccacgaa
      361 gtgcttagtc cttggggagc agcgccttcc gggacaactt catgcgcccg cgctcgtcca
      421 cctcgagcag ctttacctgc acgatgtcgc ccttcttgac cacgtcctcg gtcttctcgg
      481 tgcggccgtg ctggagctcg ctgatgtgga gcaggccttc cacgcccgga aggatctcca
      541 cgaacgcgcc gaacgcggtg gtgctcttca ccggtccctc gtaggtgcgg cccacctcgg
      601 gctcggtggt gatcgccgcg accatcgcgc gggccttctc ccccgcttcg ccgcccaccg
      661 cggagatggt caccacgccg ctgtcctcga tgctgatctt ggcgccggtg gcgtcctgga
      721 tgccgcggat ggtcttgccc ttggggccga tcacgtcgcc gatcttgtcc ggcttgatct
      781 gcatggtgaa gatgcgcggg gcgtacttgg agagctcggt gcgcggcccc ggcagcgcct
      841 tcgccatctc cttcaggatg tgcagccggc cccgccgcgc cttctccagc gcctgctcca
      901 tgatcttgag gtcgaggccc tcgatcttga tgtccatctg gatcgaggtg atgccccgct
      961 cggtgccggc gaccttgaag tccatgtcgc cgaggtggtc ttccgagccc aggatgtcgg
     1021 tcaggatggc gaccttgtcg ccttccttga tgaggcccat ggcgacgccg gcacagggag
     1081 ccttcatcgg cacccccgcg tccatcagcg ccagcgagcc gccgcagacc gtggccatcg
     1141 aggacgagcc gttcgactcc aggatctcgg agaccacgcg gagggtgtag gggaagtcct
     1201 cgtactgcgg gaggagcggc tggagcgccc gttcggccag ggccccatgt ccgatctcgc
     1261 ggcggctggt gccgcggatc atcttcacct cacccgtcga gtagggcggg aagttgtagt
     1321 gcaacatgaa cgacttggtc gtctcgccgg ccacgtcgat gctgtcgatc cgctgctcgt
     1381 cgtcggtggt gccgagggtg acggagacga gcgcctgggt ctgcccccgg gtgaacaccg
     1441 cggagccgtg ggtccgcggc agcacgccgg cctggatcgt gatcggccgg atggtatcga
     1501 ggtcgcggcc atccacccgc tcaccgcgat ccagcacctg cttccgcatc acccggtact
     1561 cgatgtcctc gaggtggccg gagatctcgc gcccccgctc ggggtagtcc gccagcaggg
     1621 cgcccgtgac ctgctccttc acgcccttca cccccgccga ccgcgccgcc ttgtcgctgg
     1681 cgttgatggc ctgggccatc gcgtcttcgg cggcgtcctg cgcgcgcccc tggagctcgg
     1741 gatcgagctc cgccttgacc cactggagct tcgccgcggc gccggccttg tccatcagct
     1801 tgcgctcgag gccgatcaag tctcggatcc ccttctgcgc caccttgagc gcctcgagga
     1861 tctcggcctc ggcgacctcc agcgagccgc cctcgaccat cacgacggag tcggccgagc
     1921 cactcaccac cagatcgatg gtggagaact cgagctgctg gaaggtggga ttgaggatcc
     1981 agttcccctc gacccggccc acgcggacgc cggccagcgg cccgttccag ggcaccggcg
     2041 agaggctgag cgccgtcgag gccgccacca cgccgaggat atcggcgtcg ttctcctggt
     2101 cggcggagag gacggtgacg aagacctgca cctcgttctt gaacccctcg ggaaagagcg
     2161 gccggaccga acggtcgatc aggcggctgg cgaggatctc cttgtccgaa ggacggccct
     2221 cgcgcttgag gaacccgccg gggatcttgc ccgcggcgta ggtcttctcg cgatactcga
     2281 ccgtgagggg gaagaacggg agggtggaga cgttggggga gacggtcact gcggccagca
     2341 ccatcgtgtc gccgaagcgt acgacggcgg agcctgcggc ctgcttcgcc agccacccgg
     2401 tctccagtag gaggggacgt ccggcgaact gggtctcgat ccgttgcgct gtcactgcct
     2461 tctctctctc tgtgtgctct ggtttctttg ctgcccggac gctgcaacgc agagagggcg
     2521 tcccgacgct gtcgatcggg acgcccccct gggagcgcgg tgtttagtgg cggagtccaa
     2581 gctgctcgat cagcgctcgg taggtctgga gatcgctccg cttgaggtac gtcagcagcc
     2641 tgcggcgggt gccgaccatc ttcaggagcc cccggcggcc gtga
//
LOCUS       DASUYN010000134         2913 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1586393, whole genome shotgun sequence.
ACCESSION   DASUYN010000134 DASUYN010000000
VERSION     DASUYN010000134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2913)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2913)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2913
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1586393"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            115..675
                     /locus_tag="VF061_02590"
     CDS             115..675
                     /locus_tag="VF061_02590"
                     /inference="COORDINATES: protein motif:HMM:NF015319.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HEX6668416.1"
                     /translation="MGITYCDIALSHEWHGPYHDTEYGFPLDDDAALFERLILEINQA
                     GLSWLTILKKRAAFRRAYDGFDPAVVARYGARDRRRLLADPGIVRNRLKVEAAVANAA
                     RILELRESHGSFAAWLAAHHPRPKEEWVKLFKQTFRFTGGEIVGEFLMSIGYLPGAHV
                     ASCPVHRRIMRLRPPWAGASGRRAAR"
     gene            672..1466
                     /locus_tag="VF061_02595"
     CDS             672..1466
                     /locus_tag="VF061_02595"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX6668417.1"
                     /translation="MTRSIAGPAGKLGLDDGGTGPAVVFLHSLAGNAGQWAAQTEHVR
                     KTRRAIALDLRGHGRSEAPSDGQYGIATQVADVAAVVEALRLERFALVGHSFGAGVAL
                     EYAAAYPARLTHLVVADPVGDGTGTPEAEVRPFLEALESPAYTETIEGYWSSIAGSNG
                     AVLERLLTDLRATPRETVVRGLHAVMAFDPKPALARLRAPTLAVVTPANDYAYSMHKL
                     GSGLPHRVIEGTGHWLQIERPAEFNRILDQFLQATGPAPGADTYSR"
     gene            complement(1421..1834)
                     /locus_tag="VF061_02600"
     CDS             complement(1421..1834)
                     /locus_tag="VF061_02600"
                     /inference="COORDINATES: protein motif:HMM:NF022681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3037 domain-containing protein"
                     /protein_id="HEX6668418.1"
                     /translation="MSGPGRVAYDFAVLRVVPHVHLGDFAPVGVIVHARTLEFLGMRA
                     LTDPERLRERFPEIDHELLLRYLKTFEGICAGDPGAGPVALEPPSERFHWLTAPRSDV
                     LQTSPIHEGLCDDPAHALERLYREYVSAPGAGPVA"
     gene            complement(1831..2670)
                     /locus_tag="VF061_02605"
     CDS             complement(1831..2670)
                     /locus_tag="VF061_02605"
                     /inference="COORDINATES: protein motif:HMM:NF042851.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HipA family kinase"
                     /protein_id="HEX6668419.1"
                     /translation="MATPEQLPRVTAMRYVQPLREGGSLPAVVDTEDGLYVVKFRGAG
                     QGPKALIAEILVGLLATALDLPVPQLALVDLPPPFGRSEPDPEIQDLLRRSHGLNVGL
                     RYLDGAFNFDPAAAGDVITPDFASRLVWLDALVTNPDRTHRNPNLLVWQRRPWLIDHG
                     AALYVHHDWASATPKKTRGPFPLIAGHVLLRRGDELEPVDAECAGELTGETLRRIVDL
                     LPDELLRGSGLEREGDPAVHRERYLDYLTARLRSPRAFHTAAVEARDSLRRSTPRARS
                     ARR"
     gene            complement(2680..>2913)
                     /locus_tag="VF061_02610"
     CDS             complement(2680..>2913)
                     /locus_tag="VF061_02610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668420.1"
                     /translation="VGLCVGWWIANTYTDSHLRSGLRSLGIGSGGTRVVSSSTYEAMT
                     FWLPLLAAALCAYLGERIGAHYRGRESPGRGRI"
BASE COUNT          437 a         1039 c         1034 g          403 t
ORIGIN      
        1 gatggcctcc ctcgctgcgc tcgggacagt gcctcgacaa cgcttgacgc tcctgcgctc
       61 cggcataaga ttgatcgctg gccgaagaaa taccgaagct acacgggagc cgccatgggc
      121 atcacgtact gcgacatcgc cctctcccac gagtggcacg ggccctacca cgacaccgag
      181 tacgggtttc cactcgacga cgacgccgcg ctcttcgagc ggctgatcct cgagatcaac
      241 caggccggac tctcctggct caccatcctc aagaagcgcg cggcctttcg ccgcgcctac
      301 gacgggttcg atcccgccgt cgtcgcgcgc tacggggcgc gcgaccgccg ccggctgctc
      361 gcggaccccg gcatcgtgcg caatcgcctg aaggtcgagg cggccgtcgc caacgcggcg
      421 cgcatcctcg agctgcgcga gagccacggc tcctttgccg cctggctagc ggcgcaccac
      481 ccgcgcccga aggaggagtg ggtgaagctc ttcaagcaga ccttccgctt cacgggtggc
      541 gagatcgtgg gagagttcct catgagcatc ggctacctgc ccggcgcgca cgtcgcgtcg
      601 tgccccgtgc accggcggat catgcggctg cggccgccgt gggccggagc gtcgggtcgg
      661 agggctgcgc ggtgactcgg agcatcgccg ggcctgcggg aaagctcggg ctggacgacg
      721 gcggcaccgg gccggccgtc gtcttccttc actcgctcgc gggcaacgcg ggacagtggg
      781 cggcacagac cgagcacgtg cggaagacgc gccgggcgat cgcgctcgac ctgcgggggc
      841 acggccggtc ggaggccccg tccgatggac agtacggcat cgccacccag gtggccgatg
      901 tggccgccgt ggtcgaggcc ctccggctgg agcggttcgc cctcgtgggg cacagcttcg
      961 gggctggcgt cgccctggag tacgcggccg cctaccccgc acggctcacc cacctggtgg
     1021 tggcggaccc agtcggggat ggaaccggga ccccggaggc cgaggtccgg cccttcctcg
     1081 aggcgctgga gtcacctgcc tacaccgaga ccatcgaggg ctactggagc agcatcgccg
     1141 gctctaacgg cgcggtgctc gagcgactcc tgaccgatct gcgcgccacg ccccgcgaga
     1201 ccgtggtccg cgggctccac gcggtaatgg cgttcgatcc caagccggcc ctggcccggc
     1261 tccgggcgcc cacgctcgcc gtcgtcacgc cggccaacga ctacgcctac agcatgcaca
     1321 agctgggctc gggcctgcct catcgcgtga tcgaggggac cggccactgg ctccagatcg
     1381 agcggcccgc ggagttcaac cggattctcg accagttcct tcaggcgacc ggtcccgctc
     1441 ccggcgccga cacatactcc cggtagagcc gctccagggc gtgcgcgggg tcgtcgcaca
     1501 gcccttcgtg gatcggcgag gtctgcagca cgtccgagcg gggcgccgtc agccagtgga
     1561 agcgctccga gggcggctcg agcgccaccg gtccggcccc gggatcgccg gcgcagatcc
     1621 cttcgaacgt cttcagataa cgcagcagca gctcgtgatc gatctcgggg aagcgctccc
     1681 ggagccgctc gggatcggtc agcgcgcgca tgccgagaaa ctcgagcgtg cgggcgtgca
     1741 cgatcacgcc caccggggcg aagtccccca ggtgcacgtg cggcaccacg cgcaggacgg
     1801 cgaagtcgta ggcgacgcgc ccgggcccgc tcatcgccgt gccgaccggg cccgcggggt
     1861 gctgcgacgg agcgagtcgc gagcctccac cgccgccgtg tggaacgcgc ggggcgaccg
     1921 cagacgggcg gtcagatagt ccagatagcg ctcgcggtgc accgccgggt ctccttcgcg
     1981 ctcgaggccg gacccgcgga gcagctcgtc ggggagcagg tccacgattc gacggagggt
     2041 ctcccctgtc agctcgccgg cacattcggc gtccacgggc tcgagctcgt cgccccgtcg
     2101 cagcagcacg tgccccgcga tgaggggaaa cggtcctcgg gtcttcttcg gcgtcgcgct
     2161 cgcccagtcg tgatggacgt agagtgcggc gccgtggtcg atcagccagg gccggcgctg
     2221 ccacaccaac aggttcgggt tgcggtgggt gcggtcggga ttggtcacga gagcgtcgag
     2281 ccacaccagg cgcgacgcga aatcaggggt gatcacgtcg cctgctgccg cgggatcgaa
     2341 gttgaaggcg ccgtcgagat accggaggcc gacgttgagc ccgtgactcc ggcgcagcag
     2401 gtcctggatc tcgggatcgg gctcgctccg cccgaagggc ggcggcaggt ccaccagcgc
     2461 cagctgcggc accggcaggt ccagcgccgt ggcgagcagt ccgaccagga tctccgcaat
     2521 cagcgccttc gggccctgcc ccgcgccgcg gaacttcacc acgtagaggc cgtcctccgt
     2581 gtccactacg gcggggagcg agccgccctc gcgcagcggc tgcacgtagc gcatcgccgt
     2641 cacgcgcgga agctgctccg gggtcgccat ggcggggaat tatatacggc cgcgcccggg
     2701 ggattctcgt ccgcgatagt gggcgccgat ccgctcgccg aggtacgcac agagcgcggc
     2761 ggcgagcagg ggcagccaga aggtcatggc ctcataggtg gacgagctca cgacgcgggt
     2821 cccgccgctg ccgatgccca gcgatcggag cccggagcgg agatgggagt cggtgtaggt
     2881 gttcgcgatc caccacccca cgcacaggcc gac
//
LOCUS       DASUYN010000135         2558 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_704649, whole genome shotgun sequence.
ACCESSION   DASUYN010000135 DASUYN010000000
VERSION     DASUYN010000135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2558
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_704649"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(92..1966)
                     /locus_tag="VF061_02615"
     CDS             complement(92..1966)
                     /locus_tag="VF061_02615"
                     /inference="COORDINATES: protein motif:HMM:NF013647.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0033179 - proton-transporting V-type
                     ATPase, V0 domain [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_function: GO:0046961 - proton-transporting ATPase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="V-type ATPase 116kDa subunit family protein"
                     /protein_id="HEX6668421.1"
                     /translation="MIVPMTRVRIMGPRRLLSDVLATVQDVGVLHLTSAPEWGPLHGS
                     VLAPPDARRRRQLARILEDADSVLAEAPASRASVPGQPQCARWARLARRTRRTLRALD
                     ERATKLREEQAMLLRFQGFFAVFESLGLDRAHRPGFTAFHVVLRSDQVDLLPSLERAL
                     VEMLDGACETLTRQLPGGEVALLILVRASEASRVEALLADTRVQEVPAPSGFGPSLVE
                     ALPRMRERVTAIPDELEAIRAERADLLSRNAPELRCAAVALRDRLGQLDALALTAVSP
                     NLFVLDGWLPTDTEPRLSAALARGFGVEVVVETLDRAGWHGEDAPVVLRNPRLFRPFE
                     LITGMLPLPRYGTIDPTPYVAVSFPMFFGLMLGDAGYGAAVALLALILHRRSRPGTTL
                     RAVAEVAGPCALFAIIFGVLFGEYFGDLGRHWLGLQPLWFDREDAIVPFLVLTLSIGV
                     VHVLLGLALGVVAGAREHPRQAVGRGLSAGMIVLIVLALLAAVEVLPRAVLTPAVVGI
                     LVAFPILIALEGIVAAVELLGSIGHVLSYARIMALGTASVMLAVVANRLAGAMGSAVV
                     GALFALLFHLVNFALGLFSPTIHALRLHYVEFFGTFYSPGGTRYEPLGHASSPAARTA
                     "
     gene            complement(1963..2325)
                     /locus_tag="VF061_02620"
     CDS             complement(1963..2325)
                     /locus_tag="VF061_02620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668422.1"
                     /translation="MNGLGDPRSVVVPEGGLLRLVETEARLAQALVAAESEAAAVVRA
                     AREEATEQWARLQVRIDLEAAALAERIAAERDAEMQRITAATDVRCRRLCDLSDETVN
                     RLAAAMAARVLDLPEPRS"
BASE COUNT          417 a          908 c          936 g          297 t
ORIGIN      
        1 cgactgggcc caggcagtgg cgagagcggg gatgccgacg gccagtgcgg cgctgagcgt
       61 gacccagaag atcgacatgg ctgctccttg gctaggcggt gcgggcggcg ggggatgacg
      121 cgtggccgag cggctcgtac cgcgtgccgc cggggctgta gaacgtgccg aagaactcga
      181 cgtagtggag ccggagtgcg tggatggtcg ggctgaacag gcccagcgcg aagttcacga
      241 gatggaacag cagggcgaac agcgccccga ccacggcgct tcccatggcg ccggccagcc
      301 ggttcgccac gaccgcgagc atgaccgacg cggtgccgag cgccatgatg cgggcatagg
      361 agaggacgtg accgatcgag ccaagcagct cgacggccgc cacgatgcct tccagggcga
      421 tcaggatcgg gaacgccacc aggatgccca cgaccgccgg cgtgagcaca gctcggggca
      481 gcacctccac cgcggcgagc agggcgagaa cgatgaggac gatcatcccg gcggagagcc
      541 cgcgccccac cgcctgccgc ggatgctccc gcgcgccggc cacgacgccg agcgcgagcc
      601 cgagcagcac gtggacgaca ccgatggaca gcgtcaggac caggaatggg acgatcgcat
      661 cctcccggtc gaaccagagc ggctgcaagc cgagccagtg gcggccgagg tcgccgaagt
      721 actcgccgaa cagcacgccg aagatgatcg cgaagagcgc gcacggacct gccacctcgg
      781 ccaccgcgcg cagcgtcgtg cccgggcggg agcggcggtg gaggatcaac gcgaggagcg
      841 cgaccgccgc gccgtagccc gcgtcgccca gcatgagccc gaagaacatg gggaacgaga
      901 ccgcgacgta tggcgtgggg tcgatggtcc cgtagcgagg cagcggcagc atgccggtga
      961 tcagctcgaa gggacggaag agcctgggat tccgcagcac cacaggtgcg tcctcgccat
     1021 gccaccccgc ccggtcgagc gtctcgacca ccacctcgac gccgaacccg cgggccagcg
     1081 cggcgctcag ccgcggctcg gtatccgtcg ggagccagcc atccagcacg aagagattgg
     1141 gcgagaccgc cgtgagcgcc agcgcgtcga gctggccgag ccggtcccgc agcgcgaccg
     1201 ccgcgcaccg cagctccggc gcgttccgcg acaggaggtc cgcccgctct gcccggatcg
     1261 cctccagctc atcggggatg gcggtcaccc gctcccgcat ccggggtaac gcctcgacca
     1321 ggctcgggcc gaagccactc ggcgcgggca cctcctgcac ccgggtatcg gccagcagcg
     1381 cctcgacgcg ggacgcctcc gacgcgcgca ccaggatcag cagggcgacc tccccgccgg
     1441 gcagctgtcg ggtgagcgtc tcgcaggcgc cgtccagcat ctcgaccagc gcgcgctcaa
     1501 gcgacgggag caggtccacc tgatcactgc ggaggacgac gtggaacgcg gtgaagcccg
     1561 gccggtgcgc acggtccagt ccgagggact cgaagaccgc gaagaagccc tggaagcgga
     1621 gcagcatcgc ctgctcctcg cgcaacttcg tcgcccgctc gtcgagcgcg cgaagcgtgc
     1681 ggcgggtccg gcgcgcgagc cgcgcccagc gggcgcactg cggctgcccc gggacggacg
     1741 cgcgcgaggc gggagcctcg gcgagaaccg agtccgcgtc ctcgagaatg cgggcgagct
     1801 gccgccgacg gcgggcgtcg gggggcgcga ggacgctgcc gtgcaagggg ccccactccg
     1861 gggcggaggt caggtgcagc acgccgacgt cctgcacggt ggcgagcacg tcggagagca
     1921 gtcgccgcgg ccccatgatg cggacccggg tcatggggac gatcatgacc gcggctccgg
     1981 aaggtcgagc acccgagccg ccatcgcggc ggcgagccgg ttcaccgttt cgtcggagag
     2041 gtcacagagc cggcggcagc gcacatcggt tgcggcggta atgcgttgca tctccgcgtc
     2101 gcgctccgcc gcgattcgct cggcgagggc ggcggcctcc aggtcgatcc gcacctgcag
     2161 tcgggcccac tgctcggtgg cctcctcccg ggcggcacgc accacggccg cggcttcgct
     2221 ctccgcggcc accagtgcct gggcgagccg ggcctccgtc tccaccagcc gcaggagccc
     2281 gccttccgga accacgaccg acctggggtc tcccagtccg ttcacagcgc ctccagtggg
     2341 gccgcgaagt tacgcggtca ccgccctaat cttcggctgg aggggttctg gcgagtgtga
     2401 agggaggatg aatgtggctt cacggattgt cccggccgtc gcgtcccgac ctcgaccgag
     2461 gtgtcgccgg gtctcgggac cccgtcgagc ccggttcacg cgggtcttgc gacgcccgga
     2521 gccgacctta ggttgggacc aatgccgccg atcgtctc
//
LOCUS       DASUYN010000136         4187 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_704769, whole genome shotgun sequence.
ACCESSION   DASUYN010000136 DASUYN010000000
VERSION     DASUYN010000136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4187)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4187)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4187
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_704769"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..860
                     /gene="rpsB"
                     /locus_tag="VF061_02625"
     CDS             <1..860
                     /gene="rpsB"
                     /locus_tag="VF061_02625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HEX6668423.1"
                     /translation="GVHFGHQTRRWNPKMRRFIFAERSGIYIIDLQKTLRQIQKAQEL
                     LRSVVLKGDGVLFVCTKKQLKAIVQAEAQDCGAFYVTERWLGGMLTNFQTLKKQIRRL
                     RELEQGAADGDFENYTKKEKLLFERERVKLSRNLEGIKQLSRLPGALFVVDAKKEKIA
                     VAEANKLGIPVVAIVDTNADPDVITVPVPGNDDAIRSVSLITAALSDVIKEARAQMPM
                     REVTEDLEAETYSTDTGSEGDAEADRKRRRPRRKRRPKPEAIAARLKTEAEGGAEAPA
                     PAGAGEAGA"
     gene            960..1565
                     /gene="tsf"
                     /locus_tag="VF061_02630"
     CDS             960..1565
                     /gene="tsf"
                     /locus_tag="VF061_02630"
                     /inference="COORDINATES: protein motif:HMM:NF013085.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor Ts"
                     /protein_id="HEX6668424.1"
                     /translation="MASVTISPKDVSELRTRTGAGMMDCKRALEEAGGDMDKAAEILR
                     KKGIAKAEKRAGRVASQGLVVSYIHHNQQVGVLLELNSETDFVARNEAFGQLARELAL
                     HIASADPIGVNPEDVPADLVERERRIAEEQVAAEGKPENIRAKIVEGKLKKFVAERTL
                     LEQPFVRNDKITVGELIKEASGKLGEAITVRRFARFQIGAA"
     gene            1565..2278
                     /gene="pyrH"
                     /locus_tag="VF061_02635"
     CDS             1565..2278
                     /gene="pyrH"
                     /locus_tag="VF061_02635"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033862 - UMP kinase activity [Evidence
                     IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HEX6668425.1"
                     /translation="MALAYTRALLKLSGEALAGEKGSGLDFHVVEAFAEEIKAVHALG
                     VHLSLVVGGGNIIRGATASREGLDRVSADYMGMLATVINALALQDVLEKIGVDTRVMT
                     AVRMESVAEPYIRRRAIRHLEKGRLVIFAAGTGNPFFSTDTAGVLRALEIEAQVILKA
                     TNVDGIFTEDPRKNSGAAFIRELTYQEAIVKNYAVMDANAFGLCKANQLPIVVFNINR
                     PGAIRRVLEGDPDIGTIVR"
     gene            2275..2829
                     /gene="frr"
                     /locus_tag="VF061_02640"
     CDS             2275..2829
                     /gene="frr"
                     /locus_tag="VF061_02640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008135 - translation factor activity, RNA
                     binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HEX6668426.1"
                     /translation="MSTIPELTKHARELMHKAVESTKREFSGIRSNKATPSLLDTVRV
                     EAYGSSVPITQVAMVAAPEPRLLTVQPFDKSLAGTVEKAIRDAGLGLNPATQGTLIRV
                     PLPALSEERRKELVKLVHKLAEEGRIAVRHARTDTLSRIKKLEHVSSDDKTRAEKDVQ
                     KLTDEHIKQIDGLIHSKEAEIMEV"
     gene            2833..3573
                     /locus_tag="VF061_02645"
     CDS             2833..3573
                     /locus_tag="VF061_02645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HEX6668427.1"
                     /translation="MSDDLLQRVRVHGAVPTHVAIIMDGNGRWAAGRSLPRPLGHHAG
                     MTSVREVVEGCLQAGVSVLTLFAFSQENWQRPAGEIEALMSLLEEYIAREMRELREQG
                     VAVRILGDIDRLTGGARAAADRIVAETEGGTRLALNLCISYGARAEIVRAARLLAEDV
                     AAGRLVPAEIDEDALARRLYTAEWPDPDLLIRTSGEMRISNFLLWQLAYAELYVTPVL
                     WPDFTRHHLFEAILEFQRRDRRFGRVPA"
     gene            3573..>4187
                     /locus_tag="VF061_02650"
     CDS             3573..>4187
                     /locus_tag="VF061_02650"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: protein motif:HMM:NF013327.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HEX6668428.1"
                     /translation="MASELARRVGFAAVAIPLVLLVVWYGGLPLAALVATAAALGAGE
                     LFDLAERGGVRPARALGIATASALPLVTWLAIDRPLMGELLTDAGLSLGALWVVLLLT
                     WALAARPPSDRPLSAAAVTLLGVAYAGALPASLLVIRHGVEPTKSWAGLGLVCFPLVV
                     TWVCDTAAMFGGRTLGGPKLSPVVSPGKTRSGAVAGVVGALVVAP"
BASE COUNT          675 a         1435 c         1495 g          582 t
ORIGIN      
        1 cgggcgtcca cttcggccat cagacccgcc ggtggaatcc caagatgcgg cgcttcatct
       61 tcgcggagcg ctccggcatc tacatcatcg atctccagaa gaccctccgc cagatccaga
      121 aggcccagga actgctccgc agcgtggtcc tcaagggcga cggcgtgctt ttcgtctgca
      181 ccaagaagca gctcaaggcc atcgtccagg cggaggccca ggactgcggc gcgttctacg
      241 tcaccgagcg gtggctcggc ggcatgctca ccaacttcca gaccctgaag aagcagattc
      301 gccgcctccg ggagctggag cagggcgccg ccgacggcga cttcgagaac tacaccaaga
      361 aggaaaagct gctgttcgag cgcgagcgcg tgaagctgag ccgtaacctc gagggcatca
      421 agcagttgag ccgcctgccc ggcgcgctct tcgtggtgga cgccaagaag gagaagatcg
      481 cggtcgccga agccaacaag ctcggcatcc cggtcgtggc catcgtggac accaacgccg
      541 atccggacgt cattaccgtc ccggtcccgg gcaacgacga cgcgatccgc tcggtctcgc
      601 tcatcaccgc ggccctctcc gacgtcatca aggaggcccg cgcccagatg ccgatgcggg
      661 aggtgaccga ggacctcgag gccgagacct acagcaccga caccgggtcc gagggcgacg
      721 ccgaggccga ccgcaagcgc cggcggccgc gccgcaagcg gcggccgaag ccggaggcga
      781 tcgccgcccg gctcaagacc gaggccgagg gcggggcgga ggcacctgcg cccgccgggg
      841 ccggcgaggc cggcgcgtaa gcgcggcgga ccggaccgtg agagtctccg ccgctcctgg
      901 cccgtgcggg ccgtgagcgg cggtcttact attcagcccg agattcaccc gaggacgaca
      961 tggcgagcgt gacgatttcc cccaaggacg tgagcgagct ccggacccgc accggtgccg
     1021 gcatgatgga ctgcaagcgg gcgctggagg aggcgggcgg cgacatggac aaggccgcgg
     1081 agatcctccg gaagaagggg atcgccaagg cggagaagcg cgccggccgg gtcgcctcgc
     1141 agggactggt ggtgagctac atccaccaca atcagcaggt gggcgtgctg ctggagctca
     1201 actcggagac cgacttcgtg gcccggaacg aagccttcgg ccagctcgcc cgcgagctgg
     1261 cgctgcacat cgcctcggcc gatccgatcg gcgtgaaccc ggaggacgtg cccgcggacc
     1321 tggtggagcg ggagcgccgg atcgccgagg agcaggtcgc ggccgaaggg aagccggaga
     1381 acatccgggc caagatcgtc gaagggaagc tcaagaagtt cgtcgcggag cgcacgctgc
     1441 tggagcagcc gttcgtccgc aacgacaaga tcaccgtcgg ggagctgatc aaggaggcgt
     1501 ccggcaagct gggcgaggcc atcacggtcc gccgcttcgc ccggttccag atcggggcag
     1561 cctgatggcc ctggcctaca cccgcgccct gctcaagctg tcgggcgagg cgctggcggg
     1621 ggagaagggg agcggcctcg acttccatgt ggtcgaggcc ttcgcggagg agatcaaggc
     1681 ggtgcacgcc ctcggcgtgc acctctcgct cgtggtgggc gggggcaaca tcatccgggg
     1741 ggccaccgcc agccgcgagg ggctcgaccg ggtctccgcc gattacatgg gcatgctggc
     1801 gaccgtgatc aacgcgctcg cgctgcagga cgtgctggag aagatcgggg tggacacccg
     1861 ggtgatgacg gcggtgcgca tggagtccgt ggccgagccc tacatccgcc ggcgcgccat
     1921 ccgccacctg gagaagggcc ggctggtgat cttcgccgcc ggcaccggca acccgttttt
     1981 ctccaccgac acggccggcg tgcttcgcgc cctcgagatc gaggcgcagg tgatcctcaa
     2041 ggcgaccaac gtggatggga tcttcaccga ggatccgcgg aagaactccg gcgccgcgtt
     2101 catccgcgag ctcacctacc aggaggccat cgtcaagaac tacgccgtga tggacgcgaa
     2161 cgccttcggg ctctgcaagg ccaaccagct gccgatcgtg gtcttcaaca tcaaccgtcc
     2221 cggcgccatc aggcgggtcc tcgagggcga cccggacatc gggaccatcg tccgatgagc
     2281 accatacccg aattgaccaa gcacgcgcgg gaactgatgc acaaggcggt cgagagcacc
     2341 aagcgggagt tcagcggtat ccgcagcaac aaggccacgc cctccctgct cgacacggtg
     2401 agggtcgagg cctacggcag cagcgtaccc atcacgcaag tggccatggt cgccgcgccc
     2461 gagccccggc tgctcaccgt gcagcccttc gacaagtcgc tcgccggcac ggtggaaaag
     2521 gcgatccgtg acgccgggct cggcctcaat cccgcgaccc agggcaccct gatccgggta
     2581 ccgcttccgg cgctctcgga ggagcgccgc aaggagctgg tcaagctggt ccacaagctc
     2641 gccgaggagg gccgcatcgc cgtgcgccac gcgcgcaccg acacgctctc ccggatcaag
     2701 aagctcgagc acgtctccag cgacgacaag acgcgggcgg agaaggacgt ccagaagctc
     2761 accgacgagc acatcaagca gatcgacggc ctcattcatt cgaaagaggc cgagatcatg
     2821 gaagtctgac ggatgagcga cgacctgctc cagcgggtgc gggtgcacgg cgccgtcccg
     2881 acccacgtgg cgatcatcat ggacgggaac gggcgctggg ccgcagggcg ctcgctgccg
     2941 aggccgctgg gccatcacgc cggcatgacg tcggtccgcg aggtggtcga gggctgcctc
     3001 caggcgggcg tctccgtgct caccctgttc gccttcagcc aggagaactg gcagcgcccg
     3061 gccggggaga tcgaggcgct gatgagcctg ctcgaggagt acatcgcgcg ggagatgcgg
     3121 gagctccggg agcaaggcgt cgcggtgcgg atcctgggcg acatcgaccg cctcaccggc
     3181 ggcgcccggg cggcggcgga ccggatcgtg gcggagaccg aaggcggcac ccggctggcg
     3241 ctcaacctct gcatctccta tggcgcccgg gcggagatcg tgcgggcggc acggctcctg
     3301 gcggaggatg tcgccgcggg gcgcctggtc cccgccgaga tcgacgagga cgcgctcgcg
     3361 cggcggctct ataccgcgga gtggcccgat cccgatctcc tgatccgcac ctcgggcgag
     3421 atgcggatct ccaacttcct cctctggcag ctggcgtacg ccgagctgta cgtcaccccg
     3481 gtcctctggc ccgatttcac gcggcaccat ctcttcgagg cgattctgga gttccagcgg
     3541 cgcgaccgcc gcttcgggcg cgtcccggcc tgatggcctc cgagctggcg cgccgcgtcg
     3601 ggttcgcggc ggtcgcgatc ccgctggttt tgctggtggt ctggtacggc gggctcccgc
     3661 tcgccgccct ggtggcgacc gccgcggcgc tgggcgcggg cgagctcttc gacctggccg
     3721 aacgcggtgg cgtccgtccg gcccgcgcgc tcggcatcgc gaccgcgagc gccctcccgc
     3781 tggtgacctg gctcgcgatc gaccggcccc tgatgggaga gctcctcacc gacgcggggc
     3841 tgtccctcgg cgccctgtgg gtggtgctgc tgctgacctg ggcgctggcg gcgcgcccgc
     3901 cgtccgaccg tccgctttcg gcggcggcgg tcaccctcct cggcgtggcc tatgcgggag
     3961 cgctcccggc ctcgctcctc gtcatccggc acggggtgga gcccacgaag agctgggccg
     4021 gcctggggct ggtgtgcttt cccctggtcg tgacctgggt gtgcgacacc gcggcgatgt
     4081 tcgggggccg caccttgggc ggtcccaagc tgtcgccggt ggtgagcccg gggaagaccc
     4141 ggtcgggcgc ggtcgccggc gtggtgggcg cgctggtggt ggcgccg
//
LOCUS       DASUYN010000137         3807 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1808221, whole genome shotgun sequence.
ACCESSION   DASUYN010000137 DASUYN010000000
VERSION     DASUYN010000137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3807)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3807)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3807
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1808221"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..192)
                     /locus_tag="VF061_02655"
     CDS             complement(<1..192)
                     /locus_tag="VF061_02655"
                     /inference="COORDINATES: protein motif:HMM:NF017016.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000917 - division septum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HEX6668429.1"
                     /translation="MTATTKNAVRVTIGGEEYTVRSELPPEYTREVAAYFDAALKRVR
                     DSLPAMEPHKIAILAGLAIT"
     gene            complement(189..500)
                     /locus_tag="VF061_02660"
     CDS             complement(189..500)
                     /locus_tag="VF061_02660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668430.1"
                     /translation="MAYSYDRPDVKALADLEQLLKHLTEELGGWRRRTLRAEAELAEA
                     EAHGGKVAGPELKEARKRLIELEAENQALRHRIEAARERLKVLAARLSFLEQHGGGNA
                     A"
     gene            complement(503..2911)
                     /gene="pheT"
                     /locus_tag="VF061_02665"
     CDS             complement(503..2911)
                     /gene="pheT"
                     /locus_tag="VF061_02665"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: protein motif:HMM:TIGR00472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HEX6668431.1"
                     /translation="MNVSLRWLEAFLRRPLDTRDVADRLAMLGAPVDAVEPLHTDLAE
                     LVVGLVEEVRPHPNADRLRVCLVNDGTAERHNVVCGAPNVTAGKRYPFARLGTTVPHG
                     KGGAPMRIERAKLRGEVSEGMLCSARELGLGQEHDGILELDTDASPGTPLLEAVPLSD
                     HRLVVDVTPNRPDLLCHKGVARELSAAYDAPFRLPSIPGAESLDVPSPRRATTTGSVG
                     GIAITIEDPVSCPRFHAALIRGTRVGASPAWLRARLEAVGVRSINNVVDATNYVMLEL
                     NQPMHAYDAATLRGSALIVRRARTGERLVTLDDEERTLDAEMVAIADAGGVIGLAGLM
                     GGASTEVSRETSDVLLEAAYWDPPRIRRTRRALGMSTEASYRFERTIDRWAGGDAMRR
                     CIELILATGGGAPADAPLDLWPEPSHPPRIFLRPARVAQVLGVEVPWNAIERYLVAIG
                     ATVVSKPGDGRIAVDVPGWRPDLAREIDLIEEIARLHGYDTFPSDLRPFRMGTLPEAQ
                     EEIATAAVRRGMVEQGLYEVSRLPLGPADGEDSVRLLNPLSSEDAWLRRRLLPGLVRL
                     VEHNWANRVEDVRLFEIGTAWAAGAAGERPSEGRRLAAVFTGRREPRHWSGTGEGRFD
                     LWDLKGRFEAAVALAIPGGVVQVERNAWVARDAEGRIVGEAAPLTADAPPWAAPLYGF
                     ELVLDPSPRRPPQFTPLPATPASDRVLALLLPAGVTAGQVEEVLRGAGVALLERIEIE
                     SDYRGPELPAGVRSVAFRLVFRAPDRTLRDAEVDQAETRLLAALEDELGVRRRGADAA
                     GGGE"
     gene            complement(2937..>3807)
                     /gene="pheS"
                     /locus_tag="VF061_02670"
     CDS             complement(2937..>3807)
                     /gene="pheS"
                     /locus_tag="VF061_02670"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HEX6668432.1"
                     /translation="NRLKTQFEAAFASRREALDTERKTREQAGIDLTLPGRRRWTGAE
                     HPVTRVVNEIVEIFRGIGFTVAVGPEVETEWYNFLALNFPPDHPAMDMHDTLYLDAPP
                     AEREPGGRLLLRTHTSPVQIRTLQQSSPPVRVVIPGMVYRNDAFDPSHSPAFHQIEGL
                     AVDEGISFVDLKATLIHFAHRFFGPTTKTRFRPSFFPFTEPSAEMDVECQLCHGSGCP
                     ACKGTGWMEILGCGMVHPAVLENCDLDSERYTGWAFGMGPHRIAMLRYGIPDIRLLLE
                     GDMRFLEQVGGQG"
BASE COUNT          520 a         1406 c         1364 g          517 t
ORIGIN      
        1 ggtgatcgcg aggccggcca ggatggcgat cttgtgcggc tccatcgccg ggagcgagtc
       61 gcgcacccgc ttgagcgcgg cgtcgaaata ggcggcgacc tcgcgggtgt actccggcgg
      121 cagctcggag cggacggtgt actcctcgcc gccgatggtg acgcgaacgg cgttcttggt
      181 cgtggcggtc acgccgcgtt ccctcccccg tgctgctcca ggaaggagag ccgggccgcg
      241 agcaccttca gccgctcgcg ggccgcctcg atccgatggc gcagggcctg attctccgcc
      301 tccagctcga tcaaccgctt gcgcgcttcc ttgagctcag gcccggccac cttgccaccg
      361 tgggcctccg cctcggccag ctccgcctcg gcgcggagcg tccgccggcg ccagcccccg
      421 agctcctcgg tgaggtgctt gagcagctgc tccaggtcgg ccagcgcctt cacgtcggga
      481 cgatcatagc tgtaggccat cgtcactctc cgccgccggc ggcgtcggca ccgcgccgcc
      541 gcacgcccag ctcgtcttca agcgcggcca ggagccgcgt ctcggcctga tccacttccg
      601 cgtcgcgcag ggtgcggtcc ggcgcccgga acaccagccg gaaggcgacg ctccggaccc
      661 ccgccggcag ctcgggcccg cggtaatcgc tctcgatctc gatccgctcg agcagcgcga
      721 cgcccgcccc tcgcaggacc tcctccacct gccccgccgt cacccctgcc ggcagcaaca
      781 gcgcgagcac ccggtcggac gcgggcgtcg caggcagcgg agtgaactgg ggcggccggc
      841 ggggcgaggg atcgagcacg agctcgaacc cgtagagcgg agcggcccag ggcggcgcgt
      901 cggcggtgag cggggccgcc tcgccgacga tccggccctc ggcgtcccgg gcaacccacg
      961 cgttgcgttc aacttgcacc accccacccg gaatcgccag agcgaccgcg gcctcgaagc
     1021 gtcccttcag gtcccacagg tcgaaccggc cctcgccggt gccgctccag tggcgcggct
     1081 cgcgccggcc ggtgaacacg gcagcgagcc ggcgcccctc gctcggccgc tcgccggctg
     1141 cccccgcggc ccaggcggtg ccgatctcga acaggcgcac gtcctcgacc cggttggccc
     1201 agttgtgctc caccagacgg accagccccg ggagcaggcg gcggcgcagc caggcatcct
     1261 cggaggagag cgggttgagc agccggacgc tgtcctcgcc atccgccggg cccagcggga
     1321 gccgggacac ctcgtagagt ccctgctcga ccatgccccg ccgcaccgcc gccgtggcga
     1381 tctcctcctg cgcctcggga agggtgccca tccggaaggg ccggaggtcc gacgggaagg
     1441 tgtcgtatcc gtgcagccgg gcgatctcct cgatcaggtc gatctcccgc gccaggtccg
     1501 gccgccagcc gggcacgtcc accgcgatcc gcccgtcgcc gggcttggag accaccgtcg
     1561 caccgatcgc gacgaggtac cgctcgatcg cgttccaggg cacctcgacg ccgagcacct
     1621 gggcgacgcg ggccggccgg aggaagatcc gcggcggatg cgacggctcc ggccagagat
     1681 cgagcggcgc gtcggccggc gccccgcctc cggtggccag gatcagctcg atgcagcggc
     1741 gcatggcatc gcccccggcc cagcggtcga tggtgcgctc gaagcggtag ctcgcctcgg
     1801 tactcatgcc gagggcgcgg cgggtccggc ggatgcgcgg ggggtcccag tacgcggcct
     1861 cgagcaggac gtcgctggtc tcccggctca cctcggtgga ggcgccgccc atgagccccg
     1921 ccaggccgat cacgcccccg gcgtcggcga tggcgaccat ttccgcgtcc agcgtgcgct
     1981 cctcgtcgtc gagcgtgacc agccgctcgc cggtgcgggc tcgccgcacg atcagcgccg
     2041 agccgcggag cgtcgccgcg tcgtaggcgt gcatcggctg gttgagctcg agcatgacgt
     2101 agttggtggc gtccaccacg ttgttgatcg agcggacgcc gaccgcctcc aggcgggcgc
     2161 ggagccacgc gggcgaggcg ccgaccctgg tgccgcggat cagggccgcg tggaagcggg
     2221 gacaggagac ggggtcctcg atcgtgatgg cgatcccgcc cacgctgccc gtggtcgtgg
     2281 cccggcgggg ggacggcacg tcgagcgact cggcgccggg gatggacggg agacggaacg
     2341 gcgcgtcgta cgcggcgctc agctcgcggg cgacgccctt gtgacagagc aggtcgggcc
     2401 ggttgggcgt gacgtcaacg accagccggt gatcggagag gggaaccgcc tcgagcagcg
     2461 gcgtcccggg cgacgcatcg gtgtccagct ccaggatccc gtcgtgctcc tggcccaggc
     2521 cgagctcccg cgcggagcac agcatgccct cggagacttc gccgcgaagc ttggcgcgct
     2581 cgatcctcat cggtgcgccg cccttcccgt gggggacggt ggtgccaagc cgggcgaagg
     2641 ggtagcgctt cccggcggtc acgttcggcg cgccacacac gacgttgtgc cgctccgcgg
     2701 tgccgtcgtt gaccaggcag acccggagcc ggtccgcatt cgggtgcggg cgcacctcct
     2761 ccaccaggcc gacgaccagc tcggcgaggt ccgtgtgcag aggctcgacc gcatccacgg
     2821 gcgcgccgag catcgcgagc cggtcggcga cgtcgcgggt gtcgagcggg cggcggagga
     2881 aggcctcgag ccatcggaga gagacgttca tcgctcggtc accccgggca tcccggtcat
     2941 ccctgccctc ccacctgctc caggaaccgc atgtctccct ccagcagcag ccggatgtcc
     3001 gggatcccgt agcgcagcat ggcgatgcga tggggcccca ttccgaacgc ccagccggtg
     3061 taccgctccg agtccaggtc gcagttctcc agcaccgccg gatgcaccat cccgcagccg
     3121 aggatctcca tccacccggt ccccttacag gcggggcagc cgctcccgtg gcagagctgg
     3181 cactcgacgt ccatctccgc cgacggctcg gtgaagggga agaacgaggg ccggaagcgg
     3241 gtcttcgtcg tcggcccgaa gaaccggtgc gcgaagtgga tcagcgtggc cttgaggtcc
     3301 acgaacgaga tcccctcgtc caccgcgagc ccctctatct gatggaaggc gggcgagtgc
     3361 gacgggtcga aggcgtcgtt gcggtacacc atccccggaa tcaccacccg caccggcggc
     3421 gacgactgct gcagcgtgcg gatctgcacc ggcgaggtat gggtccggag cagcagccgc
     3481 ccgccgggct cgcgctccgc cggcggggcg tcgaggtaga gcgtgtcgtg catgtccatc
     3541 gccgggtggt cgggcgggaa gttgagcgcg aggaagttgt accactcggt ctcgacctcg
     3601 gggccgaccg cgacggtgaa cccgatgccc cggaagatct ccacgatctc gttcaccacc
     3661 cgggtgaccg ggtgctcggc gccggtccag cgccggcgac ccggcagcgt gagatcgatg
     3721 ccggcctgct cccgcgtctt ccgctcggtg tcgagcgcct cgcgccggga tgcgaaggcg
     3781 gcctcgaact gggtcttgag ccggttc
//
LOCUS       DASUYN010000138         2455 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1808674, whole genome shotgun sequence.
ACCESSION   DASUYN010000138 DASUYN010000000
VERSION     DASUYN010000138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2455)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2455)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2455
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1808674"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(67..372)
                     /locus_tag="VF061_02675"
     CDS             complement(67..372)
                     /locus_tag="VF061_02675"
                     /inference="COORDINATES: protein motif:HMM:NF017897.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF962 domain-containing protein"
                     /protein_id="HEX6668433.1"
                     /translation="MMLGNRPMSEWIDRYALSHQHPVNRLCHTFGIPMIVASLPLFLA
                     ALFIDGLWPVPLGLFVVGWTLQFIGHYFEGKPPEFFHDWRFLLVGLRWWLAKIRGRA"
     gene            complement(432..2015)
                     /locus_tag="VF061_02680"
     CDS             complement(432..2015)
                     /locus_tag="VF061_02680"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEX6668434.1"
                     /translation="MRAHSDQLSSDPTPSGVGPPPRPALATGVVLVQAALKLALHLTV
                     NARTPYGIHRDELLYLAMGRHLRLWNMDFPPAIAIVAEVSRTLLGESLLALRFLPALF
                     GAGIVVLAAVIARELGGGKTAQGLAAFCVLTSPLFLRSANLLQPVVMDQLLWTALLYT
                     VVRLCRGHGPGEWILLGLLVGLGLLTKFTVAFIGLGIAVAVLLSPLRGALLTPWPWIG
                     LAAALAVGLPSLVGQVRLDFPVLGQMADLRESQLERIGPVDFLLGQLLWGPAVLLAAA
                     GAWSLLASPAMRPFRPVGWSCAAAFLFLLLGQGKAYYAGPLYPTLFAAGAVLVERVAP
                     GFRGEILRGAIVGVLFAFFLLILPLGVPILPPLEMAAYARTLGVTAAVRTNTGGVGTL
                     PQDYADMLGWKEQAVAVARVYQALPADLRERVVLVAGNYGEAGALDFYGPGLGLPPVV
                     SPAGSYWFFGPGDRPGEVVITLGIPAESLRQFFDSVRTVARVGHLWAVEEERQVAINL
                     GTGARTTLQQLWPSLAGRN"
     gene            complement(2030..>2455)
                     /locus_tag="VF061_02685"
     CDS             complement(2030..>2455)
                     /locus_tag="VF061_02685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668435.1"
                     /translation="HPGSYYANPVSLAAGLATLELLTREAIARLNRTGERVRAGLAQV
                     FAEAGVPATVTGLGSLFGVHMTRGPVRTIRDAARADAALRHRLFLGLYGEGVLIDPRG
                     AGTLSTAIGPAEIEEFLRAAATVVARLSPQVGSISRTAI"
BASE COUNT          414 a          868 c          879 g          294 t
ORIGIN      
        1 tgctggggca tacggcccgc cggcgcccca caggcgagga gcagcagcag aggcaggagg
       61 gtgcgactac gcgcgcccgc ggatcttggc gagccaccag cggaggccca ccagcaggaa
      121 acgccagtca tggaagaact cgggcggctt gccctcgaag tagtgtccga tgaattgcag
      181 ggtccatccc acgacgaaca gcccgagcgg aaccggccac agcccgtcaa tgaacagcgc
      241 cgccaggaac agcgggaggg acgcgacgat catcgggatg ccgaacgtgt ggcagaggcg
      301 gttgaccgga tgctggtggc tcagtgcgta gcggtcgatc cactcgctca tcggccggtt
      361 gcctagcatc atgctgcctc cgggggtgtg ctctaacatt ggtcaaaacc gcgccgggcc
      421 gccagactcc gtcagttccg ccccgcgaga gatggccaga gctgctgcag cgtggtccgg
      481 gctcccgtgc ccaggttgat ggcgacctgc cgctcctcct ccaccgccca gagatgtccg
      541 acccgtgcca ccgtccgcac cgagtcgaag aactgtcgca ggctctccgc cgggatgccg
      601 agggtgatca cgacctcgcc gggtcggtca cccgggccga agaaccagta gctccccgcc
      661 gggctcacca ctgggggcag gcccagcccc ggtccgtaga agtcgagcgc gcctgcctcg
      721 ccgtagttcc ccgccaccag cacgactcgc tcccgcaggt ccgccggcag cgcctggtag
      781 acccgcgcca ccgccaccgc ctgctccttc cagcccagca tatcggcgta gtcctggggc
      841 agggtgccaa cgccgccggt attggtcctg acggcggcgg tcacgcccag ggtcctggca
      901 tacgccgcca tctccagtgg cggcaggatc ggcacgccca gggggaggat gagcaggaag
      961 aaggcgaaga ggaccccgac gatggcgccc cgcaggatct cgccgcggaa gcccggcgcc
     1021 acccgttcga ccagcacggc gcccgccgcg aacagggtcg ggtagagcgg gccggcatag
     1081 taggccttgc cctggcccag cagcaggaag aggaatgccg ccgcgcagct ccagcccacc
     1141 ggccggaacg gccgcatagc cgggctcgcc aggaggctcc aggcccctgc cgccgccagg
     1201 agcaccgcgg gtccccacag cagctggccc aacaggaagt cgaccgggcc gatccgctcc
     1261 agctggctct cgcgcaggtc ggccatctgg cccaggaccg ggaagtccag ccgcacctgg
     1321 cccaccaggc tgggcaggcc gaccgccagc gcggcggcga ggccgatcca gggccagggc
     1381 gtgagcagcg ctccgcggag cggcgacagc agcacggcca ccgcgatgcc cagcccgatg
     1441 aaggcgacgg tgaacttggt gaggaggccg agtcccacca ggaggccgag caggatccac
     1501 tccccgggcc cgtgtcctcg gcagagccgg acgacggtgt agagcagcgc ggtccagagc
     1561 agctggtcca tgaccaccgg ctggagcagg ttggccgacc ggaggaacag cgggctggtg
     1621 aggacgcaga aggcggcgag gccctgggcg gtcttgcctc cgccgagctc tcgtgcgatc
     1681 accgccgcga gcaccacgat cccggccccg aagagcgcgg ggaggaagcg cagggcgagc
     1741 agcgattcgc ccagcagggt tcgcgagact tccgccacga tggcgatcgc gggcgggaaa
     1801 tccatgttcc agagccggag atgccgcccc atcgctaggt acaggagctc gtcgcggtgg
     1861 atcccgtagg gtgtgcgcgc gttcaccgtc aggtgcagcg ccagcttgag cgccgcctgg
     1921 accagcacca cgccggttgc cagggccgga cgtgggggtg ggccgacccc gctcggggtg
     1981 gggtcgctcg agagctggtc tgaatgcgcc cgcacgtgcg ctacggcgtt cagatcgcgg
     2041 tgcgggagat cgagccgacc tgagggctca gccgcgcgac cacggtcgcg gccgcgcgga
     2101 gaaactcctc gatctccgca gggccgatcg ccgtcgagag cgttcccgcc ccacgcgggt
     2161 cgatcagcac cccctcgccg tacagcccca ggaacaaccg gtgacggagt gcggcgtcgg
     2221 cgcgtgccgc gtcgcggatg gtacggaccg gtccccgggt catgtgaaca ccgaacagcg
     2281 agccgagccc ggtgacggtg gccgggaccc cggcctccgc gaagacctgc gccaaccccg
     2341 cgcggacgcg ctcaccggtc ctgttgaggc gggcaatggc ctcgcgggtg agcagctcca
     2401 gggtggcgag cccggccgcg aggctcaccg ggttggcgta gtagctgcca gggtg
//
LOCUS       DASUYN010000139         5083 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1588870, whole genome shotgun sequence.
ACCESSION   DASUYN010000139 DASUYN010000000
VERSION     DASUYN010000139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5083)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5083)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5083
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1588870"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..352)
                     /locus_tag="VF061_02690"
     CDS             complement(<1..352)
                     /locus_tag="VF061_02690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668436.1"
                     /translation="MPFTLYVAIGDSMSTDHYPTCDARGLDAPPARLDPLGAAALLHR
                     NDDTRWPEFRGLDLETLSPDVEFLGLAEDGAMIDDVATEELARIGRDSTDPDILLTVT
                     AGGNDLLDALAAGRK"
     gene            complement(410..1345)
                     /locus_tag="VF061_02695"
     CDS             complement(410..1345)
                     /locus_tag="VF061_02695"
                     /inference="COORDINATES: protein motif:HMM:NF018963.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase-like
                     domain-containing protein"
                     /protein_id="HEX6668437.1"
                     /translation="MHSDAGPPLPRRDLLRVAALAAAALALRVPIAACSPGAPDPDGE
                     RLARWTDALRAEGLIRPAAGLGRAAVRVGELAAGTPYEAHTLEAYLRAGGDPAGVEPL
                     ALSLTRFDCVTLVEACLAVARLAGHHGAVSWEGFGREVERMRYRGGERRGYASRLHYF
                     SEWIADGERRELVRDLGRELGGHEDTRPLRFMTSHRGSYPALADDSVFREIGGIERGL
                     DGGARHVVPTSRIPAVAERIETGDVLGFATAIPGLDVTHAAFAYRDGRGVLRVLHAPL
                     SGGVVEVTAATLPEYVAAIRRSTGILVARPDWATS"
     gene            1457..2569
                     /locus_tag="VF061_02700"
     CDS             1457..2569
                     /locus_tag="VF061_02700"
                     /inference="COORDINATES: protein motif:HMM:NF025697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4394 domain-containing protein"
                     /protein_id="HEX6668438.1"
                     /translation="MRNTSLRRGVHLGVAALLALTATLVGACGKDGGITDPGPLDPPD
                     IPSEPSEPGPAGPAPVGERIWAVDLDNNLLLFGAADPTVLSMKRRITGVPILKRILGI
                     GFRPSNGRLYGVGSDSRVYTIDTLTAEATPISQQPFSPAIVDFFDIHFAMALEPSGDR
                     VRLISAESGGNWSISLDDGSATTGEKARYAEGTAYAGETPRLLGIVFTEPLPAASLHG
                     GMASLSDPCTDLMYAIDADRAEMIGSCDPDSGLYEPLGKLPEENYARCGELMWGPDGL
                     QQDDVQPPGGLWVLAQRGVEHLNSLGTVNEDGSITWHGNVPSQSPIQSAAFAEGGLYG
                     PRPSPENLRRLKMAKAPATVAAAPVPADPRASCPGA"
     gene            complement(2466..3482)
                     /locus_tag="VF061_02705"
     CDS             complement(2466..3482)
                     /locus_tag="VF061_02705"
                     /inference="COORDINATES: protein motif:HMM:NF016946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008488 - gamma-glutamyl carboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0017187 - peptidyl-glutamic acid
                     carboxylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HTTM domain-containing protein"
                     /protein_id="HEX6668439.1"
                     /translation="MRRPARGWIARWNDWWFPPSSTLHLAICRIVAVGTQLFWFKPDL
                     DEHLNLLAKNDAFLDPQLITRILAAGFSRDGFFNPATITVLYWATAAVGLLALAGLLT
                     RLSLFLFASGTWIFVSHLYSYGDRHHPEALFAIFLMLLALAPSGERLSLDALLRRRRT
                     GDAGADVSDLAIWPLKLTHVLLGLTYFSAGMAKLVHSGPRWMNGYTLQGHTLADALSR
                     DFPIGVWLGQQHALAVLLSVFTIVFELFFWLSLFVPRRWGPAFLLVALLFQIGLYLTG
                     GHDFFQHMTLLVLLMLFLYPEWWQRRSLVTPRGSSPADRPAPAPPPPSRGPSPSSAGE
                     GSPG"
     gene            complement(3479..3925)
                     /locus_tag="VF061_02710"
     CDS             complement(3479..3925)
                     /locus_tag="VF061_02710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668440.1"
                     /translation="MTTDRRKRLASAVILLVIGLHAVPVIYSPERGTLWPFMVWAMYK
                     HSRPTGPVEVNQRRILVLTGGGATDTVTPYRLGVSPTVLDQRYHRPLMGGDTSVVPRI
                     FERLNQGRTDPYVELRLVSETYTVTDTGLARRDNPVVSYRAPGVGR"
     gene            complement(3922..>5083)
                     /locus_tag="VF061_02715"
     CDS             complement(3922..>5083)
                     /locus_tag="VF061_02715"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX6668441.1"
                     /translation="IPLSYNARSLLQRPVSTAFTALGIALVVAVFIGMLALANGFRAA
                     LVRTGAAENVLILRDGADSELSSSLDRQAVSIISSSPHVAVGGDGRPMVSPEVYVVIP
                     LPRKGYDTTGMANVVVRGVSPAVWSVRANLDIVAGRRPESGKSEICVGEKMASRFDHT
                     GIGETLRFGGRDWTVVCRFTAGGSAFESEIWTENEQAMPVFRRETFQSLTFRLKDPAA
                     FEEAKRVLESDRRISVDVAREADFYAEQSQLLGSILQALAIMITGIMALGAVFGAINT
                     MYAAVATRSSEIAVLLTLGFQPRSVLASFLAESALIALVGGVIGALIALPVNGMVTST
                     TNWASFSEIAFAFRITPGLLLSGLVFAVLMGLVGGFFPARRAARLPVVQALR"
BASE COUNT          836 a         1773 c         1819 g          655 t
ORIGIN      
        1 gcttccggcc cgccgccagg gcgtcgagca ggtcgttccc gccggcggtg accgtgagca
       61 ggatgtcggg gtcggtactg tcgcggccga tgcgggcgag ctcctcggtg gcgacgtcgt
      121 cgatcatggc gccgtcctcc gcgaggccga ggaactccac atcgggagac agggtctcga
      181 ggtcgagacc ccggaactcg ggccagcggg tgtcgtcgtt gcggtgcaac aatgccgcgg
      241 cgccgagcgg gtcgaggcgg gccggaggcg cgtcgagacc gcgcgcgtca caggtgggat
      301 aatgatcggt gctcatggag tcgccgatgg cgacgtagag cgtgaacggc atagcgaccc
      361 caaagtagcg actggagccc gggagcgcag cccgacgacc ggtggcgggt cacgaggtcg
      421 cccaatcggg ccgcgcgacg aggatgccgg tcgagcgacg aatggcggcg acgtactccg
      481 ggagcgtggc cgcggtgact tcgaccacgc cgcccgagag cggggcgtgg agcacccgca
      541 ggacaccccg cccgtcccga taggcgaagg ccgcgtgagt gacgtcgagg cccggaatcg
      601 cggttgcgaa cccgaggacg tcgccggttt cgatccgctc cgccacggcc ggtatgcggc
      661 tggtgggcac gacgtgccgg gccccgccat cgagcccgcg ctcgatgccg ccgatttcgc
      721 ggaagacgct gtcatcggcc agcgcgggat aactgccgcg gtgcgaggtc atgaagcgca
      781 gcggccgggt gtcctcgtgg ccgcccagct cccggccgag atcgcgcacc agttcgcgcc
      841 gctccccgtc cgcgatccac tcgctgaagt aatgcaaccg tgaggcgtac ccgcgacgct
      901 ccccgccgcg gtagcgcatc cgctcgactt ctctcccgaa cccttcccag ctcaccgcac
      961 cgtggtgccc ggccagccgg gccaccgcca gacacgcctc caccaacgtc acgcagtcga
     1021 accgggtgag cgagagcgcg aggggctcga cgcccgcggg gtcgcccccg gcccggagat
     1081 aggcctccag cgtgtgggcc tcgtacgggg tgcccgcggc caactctccg acccggaccg
     1141 ccgcgcgtcc gagcccggct gctgggcgga tcagcccctc ggcgcggagg gcgtcggtcc
     1201 accgggcgag gcgctcgccg tcggggtctg gcgcgccggg cgaacaggcg gcgatcggca
     1261 cccggagggc cagggccgcc gcggcgagcg cggcgacccg gaggaggtcg cggcggggaa
     1321 gtggcggccc ggcgtccgag tgcatgagtc cgagtgagaa cccgttgaga tcgcgatgag
     1381 aggtggccgg tagtctctcc ggcatcagcc tgccgcggtc gccgcggccc aattcaggta
     1441 accgctggag gtcaccatgc gcaacacctc gctccgccgc ggcgtccacc tcggggtcgc
     1501 tgccctgctc gcactcaccg cgaccctcgt cggcgcctgc ggcaaggatg gcggcatcac
     1561 cgatcccggg cccctcgatc cgcccgacat cccctccgag ccctcggagc cgggcccggc
     1621 cggcccggcg ccggtgggcg agcggatctg ggcggtggat ctcgacaaca acctcctgct
     1681 cttcggcgcg gccgacccga ccgtgctcag catgaagcgc cggatcaccg gcgtccccat
     1741 cctgaagcgc atcctcggga tcggcttccg gccctcgaac ggcaggctct acggggtggg
     1801 cagcgacagc cgggtgtaca ccatcgacac cctcaccgcc gaggccacgc ccatcagcca
     1861 gcagccgttc tcacccgcca tcgtggactt cttcgacatc cacttcgcca tggcgctgga
     1921 gccgagcggc gaccgcgtgc ggctgatctc ggccgaatcg ggcggcaact ggtccatcag
     1981 cctggacgac gggagcgcga ccacgggcga aaaggcccgc tacgccgagg ggactgccta
     2041 cgccggcgag accccccggc tcctgggcat cgtgttcacc gagcccctgc cggcggcctc
     2101 gctccacggc ggcatggcat cgctgtccga tccctgcacc gatctcatgt acgccatcga
     2161 cgccgaccgg gcggagatga tcggctcgtg cgatccggac agcggactct acgagccgct
     2221 gggcaagctc ccggaggaga actacgcccg ctgcggcgag ctcatgtggg ggcccgacgg
     2281 cctccagcag gacgacgtgc agccgccggg cgggctctgg gtcctggccc agcgtggggt
     2341 ggagcacctc aacagtctcg gcaccgtgaa cgaggacggc tcgatcacct ggcacggcaa
     2401 cgtgccgtcc cagtcgccga tccagagtgc ggcgttcgcg gaaggcggat tgtacgggcc
     2461 ccggcctagc ccggagaacc ttcgccggct gaagatggcg aaggcccccg cgacggtggc
     2521 ggcggcgccg gtgccggccg atccgcgggc gagctgcccc ggggcgtgac gagcgatctc
     2581 ctttgccacc actcggggta caggaacagc atcagcagca cgagcagcgt catgtgctgg
     2641 aagaagtcgt gcccgcccgt caggtacagc ccgatctgga acagcagcgc caccagcagg
     2701 aaggcgggtc cccagcgacg ggggacgaag agcgacagcc agaagaacag ctcgaagacg
     2761 atcgtgaaga cggacaggag caccgcgagc gcatgctgtt gtccgagcca gacgccgatc
     2821 gggaagtcgc gtgagagcgc gtcggcgagg gtgtgcccct gcagggtgta gccgttcatc
     2881 caccggggcc cgctgtggac cagcttggcc atgcccgcgg agaagtaggt gagccccagc
     2941 agcacgtggg tcagcttgag cggccagatg gccaggtcgg acacgtccgc ccccgcgtcc
     3001 ccggtccggc gccggcgaag gagggcgtcc agcgacagcc gctcccccga cggcgccagg
     3061 gcgagcagca tgaggaagat cgcgaacagc gcctcgggat gatggcggtc gccgtaggaa
     3121 tagaggtggg agacgaagat ccaggtgccc gacgcgaaga ggaagagcga gagccgggtg
     3181 agcagccccg ccagggccag caggccgacg gcagccgtgg cccaatagag caccgtgatg
     3241 gtggcgggat tgaagaaacc gtcccgcgaa aagcccgcag ccaggatgcg ggtgatgagc
     3301 tgcggatcga ggaacgcgtc gttcttcgcc agaaggttga ggtgctcgtc gaggtcgggc
     3361 ttgaaccaga agagctgcgt gccgaccgcc acgatccggc agatggcgag gtgcagcgtg
     3421 gacgagggag ggaaccacca gtcgttccag cgggcgatcc acccccgcgc ggggcgcctc
     3481 acctcccgac gcccggcgcg cggtagctca ccacgggatt gtcccgccgc gcgaggccgg
     3541 tatcggtcac ggtgtaggtc tcactgacca ggcgcagctc gacgtagggg tcggtccgtc
     3601 cctggttgag ccgctcgaag atccggggca cgaccgacgt gtcgccgccc atcagggggc
     3661 ggtgatagcg ctggtcgagc acggtagggc tgacgccgag ccggtaggga gtcaccgtgt
     3721 cggtcgcgcc gccgccggtc agcaccagga tcctccgctg gttcacttcg accggtccgg
     3781 tcggccggga gtgcttgtac atcgcccaca ccatgaaggg ccacagcgtg ccccgctccg
     3841 gtgagtagat caccggtacc gcgtgcaggc cgatgacgag gagaatcacc gccgacgcca
     3901 gccgcttgcg gcggtccgtc gtcatcggag cgcctggacc accggcagcc tcgccgcccg
     3961 ccgggcagga aagaacccgc cgaccagccc catgaggacc gcgaacacga gcccgctcag
     4021 gagcagcccg ggcgtgatcc ggaaggcgaa ggcgatctcg ctgaagctgg cccagttggt
     4081 ggtgctggtg accatgccgt tgaccggcag cgcgatgagg gcgccgatca cgccgcccac
     4141 cagggcgatg agcgccgact ccgccaggaa gctcgccagc acgctccggg gctgaaagcc
     4201 gagggtcagc agcaccgcga tctcggagct ccgggtggcc acggccgcgt acatcgtatt
     4261 gatcgcaccg aacacggcgc ccagcgccat gatcccggtg atcatgatcg ccagggcctg
     4321 gaggatcgag cccaggagct gagactgctc ggcgtagaag tcggcctcgc gggcgacatc
     4381 cacgctgatc cgccggtcgc tctccagcac tcgcttggcc tcctcgaagg ccgcgggatc
     4441 cttgagccgg aaggtgaggg actgaaacgt ctcgcgccgg aacaccggca tcgcctgctc
     4501 gttctcggtc cagatctcgg actcgaaggc cgagccgccc gcggtgaagc ggcagaccac
     4561 ggtccagtcg cgcccgccga agcggagggt ctcgccgatg ccggtgtgat cgaaccgcga
     4621 ggccatcttc tcgcccacgc agatctccga cttcccggac tccggccgac ggcccgcgac
     4681 gatgtcgaga ttggcgcgga ccgaccacac ggcggggctg accccgcgca ccaccacgtt
     4741 cgccatcccc gtggtgtcgt accccttccg gggcagggga atcaccacgt acacctcggg
     4801 gctcaccatc ggccggccgt ccccgcccac cgccacgtgg ggcgacgagg agatgatgct
     4861 gaccgcctgt cggtcgaggc tgctggacag ctcggagtcc gcgccgtccc tgaggatcag
     4921 cacgttctcg gccgcgccgg tgcggaccag cgccgcgcgg aagccgttcg cgagcgcgag
     4981 catgccgatg aagaccgcga ctaccagggc gataccgagc gcggtgaagg cggtggagac
     5041 cggccgctgc agcaggctcc gcgcgttata gctgagcggg atc
//
LOCUS       DASUYN010000140         3324 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1368064, whole genome shotgun sequence.
ACCESSION   DASUYN010000140 DASUYN010000000
VERSION     DASUYN010000140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3324)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3324)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3324
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1368064"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(87..497)
                     /locus_tag="VF061_02720"
     CDS             complement(87..497)
                     /locus_tag="VF061_02720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668442.1"
                     /translation="MANEVVAHYLSGRIVKGVSLDVDPGRPKCHIRTASEGTIEVKLT
                     ELKALFFVKDLVGNAGRADASQLAQGDGRARGAFPIELEFSDGERLVGLTVRYPPVRP
                     FFFVLPADPASNNVRILINRTAVKRMTQPPPPAA"
     gene            complement(528..899)
                     /locus_tag="VF061_02725"
     CDS             complement(528..899)
                     /locus_tag="VF061_02725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668443.1"
                     /translation="MTPAWLTRIETLGTTVVVLMVGGMMIWYEAVERERRLAITIASA
                     VVLYAAVLVLCGRRSGTAGIAWWPFATAGLVTGAVAELINARFLVTGELLVAVVTGVV
                     IGTAHWAALRVWIGLGEGRRG"
     gene            complement(896..1285)
                     /locus_tag="VF061_02730"
     CDS             complement(896..1285)
                     /locus_tag="VF061_02730"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX6668444.1"
                     /translation="MRALLLVLGLWMLQDHPPRWQLAGAFVRRDSATVRRLLAPDVMV
                     WPPSPDTARRGGAAITYLQGLALSSRVSRSDLRPSRVRADGPYLVEEGEWRLTSGRTR
                     VSARYDLRWKQVDGRWRVSFLRWELFR"
     gene            complement(1285..2763)
                     /locus_tag="VF061_02735"
     CDS             complement(1285..2763)
                     /locus_tag="VF061_02735"
                     /inference="COORDINATES: protein motif:HMM:NF012503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-dependent decarboxylase"
                     /protein_id="HEX6668445.1"
                     /translation="MADAASELSDAELLERLRRLERRMRALEPGSGRRRRLRDAVIAS
                     SERFLRRIETVKGFDDVAGQGIGLLDHPIGEGGMPLATAIELLEREVVRPGAATATGK
                     HLAYIPGGGIYHSALGDYLAAVTNKYSGVFFTGPGPVRMENQMVRWVADLMGYPAGAA
                     GSIASGGSIATLTAVVSAREAHRLRAAHFGSAVVYLTSQAHHCVGKALHIAGMGEAAV
                     RQVDMDEGYRMRPEALAAAIVADRAAGRRPWLVVASAGTTDTGAVDPLDAIATVAERE
                     GCWFHVDAAYGGFFLLTEQGRSLLRGIERSDSAVLDPHKGLFLPYGSGVVVVRDAAPL
                     VAGHNYTGSYMQDARTDASELSPADVSPELSRHFRALRMWLPLALVGTAPFRAALEEK
                     LLLARYFHRAIERAGFEVGPKPDLSIVTYRWAPPGVSLERANEINKAIVDGARRDGRV
                     FLSSTMLEGRFTLRMAALAFRTHRRTVDLAVQVLREQAAGVT"
     gene            complement(2756..2962)
                     /locus_tag="VF061_02740"
     CDS             complement(2756..2962)
                     /locus_tag="VF061_02740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668446.1"
                     /translation="MSWWRKLFGGGARPEETMRLTRRVMDLFAEGKSDEEAERALFRE
                     GVPVDRARSIVAEVRRVQRRMRGG"
     gene            complement(2959..3177)
                     /locus_tag="VF061_02745"
     CDS             complement(2959..3177)
                     /locus_tag="VF061_02745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668447.1"
                     /translation="MMASYEYRILIGRDAAGGTGGVAWYLDGISQPLGSELPVILNRL
                     GAEGWRVAGLGDLGYDVRTEIILMREGR"
BASE COUNT          501 a         1243 c         1131 g          449 t
ORIGIN      
        1 cgcacttcgt cgggcgaatc gaaccgccgc aggatgacgt ccaggttttc cggcgctcca
       61 tcgctcggca tgggtggtct ccgcggtcac gccgccggag gcggcggttg ggtcatgcgc
      121 ttcaccgcgg tgcggttgat caggatccgc acgttgttac tggcggggtc cgcgggcagc
      181 acgaagaaga acggacgcac cggggggtag cggacggtga gaccgaccag ccgctcgccg
      241 tcgctgaatt ccagctcgat cggaaacgcg ccccgcgcgc gcccgtcgcc ctgggccagc
      301 tgcgacgcgt cggcccggcc cgcgttgccg accaggtcct tcacgaagaa gagggccttc
      361 agctccgtca gcttgacctc gatcgtgccc tccgaggccg tcctgatgtg gcacttgggg
      421 cgtcccggat ccacgtcgag actcacgccc ttgacgatgc gaccgctgag gtagtgcgcg
      481 acgacttcgt tggccatggg acgctcctcg ccggcggtgg agacctgcta ccccctccgt
      541 ccttcgccca gcccgatcca tacccgcagc gccgcccagt gggcggtccc gatcaccaca
      601 ccggtcacca ccgccaccag cagctcgccg gtgacgagga accgggcgtt gatcagctcg
      661 gccacggcgc cggtgaccag gccggccgtg gcgaacggcc accacgcgat cccggcggtg
      721 cccgagcgcc gaccgcagag cacgaggaca gcggcgtaga gcacgaccgc ggaggcgatc
      781 gtgatcgcga ggcgccgctc ccgctccacg gcctcgtacc agatcatcat gccgcccacc
      841 atcagcacca ccacggtcgt gccgagagtc tcgatcctcg tcagccacgc cggcgtcacc
      901 ggaacagctc ccatcgcagg aagctcaccc gccaccgccc gtcgacctgc ttccagcgga
      961 gatcatatcg cgcgctgacc cgggtacggc cgctggtgag gcgccactcg ccctcttcga
     1021 ccagatacgg gccgtcggcc cggacgcggc tcgggcgcag gtccgagcgg gaaacccgac
     1081 tcgagagcgc gaggccctgc aggtaggtga tcgcggcgcc tccgcgccgc gccgtgtcgg
     1141 gcgacggcgg ccagaccatc acgtcgggcg cgagcagccg ccggaccgtc gccgagtccc
     1201 ggcggacgaa ggcgccggcc agctgccacc gcggcggatg atcctgcagc atccagagac
     1261 cgagcaccag caggagcgcg cgcatcacgt cacccccgcg gcctgctcgc ggagcacctg
     1321 caccgccagg tcgacggtcc gccggtgggt gcggaaggcg agcgccgcca tccgcagggt
     1381 gaaacgtccc tccagcatgg tcgaggacag gaacactctg ccgtcgcgcc gggcgccgtc
     1441 cacgatcgcc ttgttgatct cgttcgcgcg ctcgaggctc acgcctggcg gcgcccagcg
     1501 gtaggtcacg atggacagat cgggcttcgg cccgacctcg aaccccgccc gctcgatcgc
     1561 gcgatgaaaa tagcgggcca gcaggagttt ctcctccagg gccgcgcgga agggcgcggt
     1621 accaaccagc gccagcggaa gccacatccg gagtgcccgg aaatgccgcg acagctcggg
     1681 cgacacgtcc gccggggaca gctcgctcgc gtcggtgcgg gcgtcctgca tgtagctgcc
     1741 ggtatagttg tgccccgcga cgagcggcgc cgcgtcccgg acgaccacca cgccggagcc
     1801 gtagggcagg aagagaccct tgtgcggatc gagcacggcc gagtcggacc gctcgatgcc
     1861 gcgcagaagg ctccggccct gctcggtcag caggaagaag cccccgtagg ccgcgtccac
     1921 atggaaccag cagccctcgc gctcggcgac cgtcgcgatc gcgtccagcg ggtccaccgc
     1981 ccccgtgtcg gtcgtcccgg cggacgcgac cacgagccag ggccgacgtc ccgcggcgcg
     2041 atccgcgacg atggccgcgg cgagcgcctc cggacgcatg cggtatccct cgtccatgtc
     2101 cacctggcgc accgccgcct cacccatgcc ggcgatgtgg agggccttcc cgacgcagtg
     2161 gtgcgcctga ctggtcaggt acacgacggc ggagccgaag tgggcggcgc gcaggcggtg
     2221 agcctcgcgg gcgctcacta ccgcggtgag cgtggcgatg ctgccaccgg aggcgatgct
     2281 cccggcggcg ccggcggggt agcccatgag gtcggcgacc cagcggacca tctggttctc
     2341 catccgcacc gggcccgggc cggtgaagaa gactcccgag tacttgttgg tgaccgccgc
     2401 gaggtagtcg cccagtgcgg agtgatagat gccgccgccg gggatgtagg cgagatgctt
     2461 gccggtggcg gtggccgcac ccggccgtac cacttcgcgc tccagcagct cgatggcggt
     2521 cgccagcggc atcccgcctt cgccgatcgg atggtccagg agaccgatgc cctgccccgc
     2581 gacgtcgtcg aagcccttga cggtctcgat ccgccgcagg aagcgctccg acgaggcgat
     2641 cacggcgtca cgcaggcgcc gccgccggcc gctgcccggc tcgagggccc gcatccggcg
     2701 ctcgagccgc cggaggcgct ccagcaattc cgcgtcggag agctccgacg ccgcgtcagc
     2761 caccgcgcat ccggcgctgg acccggcgca cctcggccac gatcgagcgc gcccggtcca
     2821 ccggcacccc ttcgcggaag agcgcgcgct cggcctcttc gtccgacttg ccttcggcga
     2881 agagatccat cacccggcgg gtgagccgca tcgtctcctc cggccgggct cccccgccga
     2941 acagcttccg ccaccagctc atcggccctc gcgcatcagg atgatctcgg tccggacgtc
     3001 gtagccgaga tcgccgagtc cggccacccg ccagccttcg gcgccaagcc ggttgaggat
     3061 gaccggcagc tcggaaccga gcggctggct gatcccgtcg aggtaccagg cgacgccgcc
     3121 ggtgccgccg gcggcgtccc ggccgatgag gatcctgtac tcgtagctgg ccatcatgtg
     3181 cctcgacagt cagaggtcgg agtcccggcg gcagggacga cgctcttcta ggtttcgatc
     3241 atgcccgaca ccgacggtcc gcccgaggcg ctcgccgttc gtcacgagcc tgagcgctcc
     3301 cgtttcgtcg tcgaccttcc cgga
//
LOCUS       DASUYN010000141         3936 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_928396, whole genome shotgun sequence.
ACCESSION   DASUYN010000141 DASUYN010000000
VERSION     DASUYN010000141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3936)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3936)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3936
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_928396"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(122..203)
                     /locus_tag="VF061_02750"
     tRNA            complement(122..203)
                     /locus_tag="VF061_02750"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(167..169),aa:Leu,seq:tag)
     gene            complement(355..1617)
                     /locus_tag="VF061_02755"
     CDS             complement(355..1617)
                     /locus_tag="VF061_02755"
                     /inference="COORDINATES: protein motif:HMM:NF028293.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative sulfate/molybdate transporter"
                     /protein_id="HEX6668448.1"
                     /translation="MRLRRSRRRPAGQDGQLAEGGVLRGALPPLGLGAHRLTHPRPGR
                     PLRFDRNELAGAFGDLGTDVPLIVGMVLAVGLDPASVLVVYGLMQLLTGLVYRLPMPV
                     QPLKAVAALVITQHIAPPVIFGAGLAIGLAMLVITGLGLIDWLHRIVPKSVVRGIQLG
                     LGLQLASLALREYVGADQAMGYWLAGIAFVLVVALLGHRRVPAALPVIALGVAYAFAF
                     KLDLGDVVASAGITLPRVHVPTTGDMLTGFVVLALPQLPLSLGNSILATRQIAEDLYP
                     EARIGVRQIGLTYAAMNLVSPFLSGVPVCHGSGGFAGHYAFGGRTGGSVVLYGAIFLA
                     LGLFFAAGFAQVIQVFPLPMLGVLLLFEGLALAVLVRDVADSRAEFFIAALVAVCAAF
                     LPYGYVVGLVVGTLLAYLTRHGLAASRW"
     gene            complement(1506..2315)
                     /locus_tag="VF061_02760"
     CDS             complement(1506..2315)
                     /locus_tag="VF061_02760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668449.1"
                     /translation="MSRKPKIVDIDPVKRPGSWRRLIVPLLFLVAAGLVAYRFLVPVK
                     RPTLPRAVEVTEVRSTIEQDGDSLRVMVNWRLVLPRGPELAESTRVEVGISDGAQSQV
                     ATVPANEHADTLHLPVPAPGETASGYSCVAAMTRGRLAPENCTPWQYVRPAAGQSPAD
                     SAPAPGGKPRAGATPKVSRIVVQPEGIQVDPDLGARCAAWQRQNPGRSVWISVNREAI
                     RECTGPNGKPTVAQFCAFAVLADGRRVKTVSSQKVEYCEELFRRWASERTA"
     gene            complement(2312..>3936)
                     /locus_tag="VF061_02765"
     CDS             complement(2312..>3936)
                     /locus_tag="VF061_02765"
                     /inference="COORDINATES: protein motif:HMM:NF015530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668450.1"
                     /translation="GGDLDAGAAAADSSAPATAEKLAQYTPVRLTAELGGLSARERQM
                     IPLLIEAAQEMDSIFWQQVYPSRDSLLASVTDSATRAYIVLNYGPWDRLDGNAPFVPG
                     TGARPAGAAFYPADMTKEEFDSAAGAAPDGGKALRDLYTLVRRDSTGRLVAVPYREAV
                     AGPSRRAAAKLREAATLADDAGLRRYLELRARALETDDYRPSDLAWMDMKQNGLDVVI
                     GPIETYDDALFGYKAAHEAYVLIKDREWSERLARYAKFLPALQRGLPVPEAYRRETPG
                     TDSDLNAYDAVYYTGQANAGSKTIAINLPNDEQVQLKKGTRRLQLKNAMRAKFDRIML
                     PIGKELIAEDQQEHIEFDSFFANVMFHEVAHGLGVKNTINGRGTVRDALKEQAGALEE
                     GKADILGLYMITRLQEQGQLPDVDLDDNYVTFLAGIFRSIRFGAASAHGRANAAELSY
                     LQERGAFTRDSATGRYRVDFPRMRAAVDSMAGLILRLQGDGDYEGVQRFMAERGKLPA
                     ALQGDLDRLGSAGIPVDIVFEQGLDALGLDRQ"
BASE COUNT          629 a         1376 c         1375 g          556 t
ORIGIN      
        1 cgacctgacc ggggccgacc ggcagcgggc cgaggaagcc gcgatggacg tgctggtggg
       61 agcgctcggc cgggtggccg cctgatcacg cctctccggc cgcacatgcg cagcaggtgg
      121 atgcgaacgc cgggagtcga acccggaccc cttgcgggac aggatcctaa gtcctgcgcg
      181 tctgccagtt ccgccacgtt cgcgtacgtt ctttcaagat aacggcgcga ttcggttggc
      241 ctcggccgcc tgaccgcgaa gcgatcggca acagcttgcc tatcgaaaag actcaactgt
      301 gcgcgccaac cccggtcgcg tgtgggcagg tatccatcct gcgcgtccca tctcctacca
      361 gcgcgacgcc gccagcccat gacgggtgag atacgccagc agcgtgccca ccaccaggcc
      421 aacgacatac ccgtagggca agaaggccgc gcagacggca accagggcgg caatgaagaa
      481 ctctgcccgc gaatccgcga cgtcacggac gagtacggcg agcgccagtc cctcgaacag
      541 cagcagaacc cccagcatcg gcaacgggaa cacctgaatc acctgggcga agccggcggc
      601 gaagaagagc ccgagcgcca ggaaaatggc cccgtagagc acgaccgaac cgcccgtccg
      661 cccgccgaag gcgtagtggc cggcaaaccc gcccgagccg tggcagaccg gaacgccgct
      721 gagaaacgga ctcaccaggt tcatcgcggc ataggtcagc ccgatctggc ggacgccgat
      781 cctggcctcc gggtagaggt cctccgcgat ctgccgggtg gcaaggatgg aatttcccag
      841 tgacagaggc aactggggca gagcgagcac gacgaacccg gtcagcatat ctccggtggt
      901 tgggacgtgg actcgcggga gcgtgatccc cgcgctggcc accacatcgc ccaggtcaag
      961 cttgaaggcg aaggcgtaag cgacccccag ggcgatgacc ggcagcgcgg ccggcacccg
     1021 ccgatgtccc agcaaggcaa ccaccaggac gaacgcgatt cccgccaacc aataccccat
     1081 cgcctggtca gcgccgacgt actcccgcag cgccagcgat gcgagctgca gacccaggcc
     1141 gagctggata ccgcgaacga cgctcttggg cacgatccga tgcagccagt cgatgagccc
     1201 caggccggtg atgaccagca tggccaaccc gatggccagg cccgccccaa agatcaccgg
     1261 cggcgcgatg tgttgggtga tgaccagggc tgcgacggct ttcagcggct gcaccggcat
     1321 gggcagccgg tagaccagcc cggtcaggag ctgcatgagg ccgtacacca cgaggacgct
     1381 tgccgggtcg agcccgaccg cgagcaccat ccccacgatg agaggtacgt ccgttcccag
     1441 gtccccgaac gctcccgcaa gctcgttgcg atcgaaccgc agcgggcgtc ccgggcgagg
     1501 gtgcgtcagg cggtgcgctc cgaggcccag cggcggaaga gctcctcgca gtactccacc
     1561 ttctgcgagc tgaccgtctt gacccgccgg ccgtcggcga gaacggcgaa ggcgcagaac
     1621 tgcgccaccg tgggcttgcc gttggggccg gtgcactccc ggatcgcctc gcggttgacg
     1681 ctgatccaca cggagcgccc ggggttctgc cgctgccacg cggcgcagcg cgcgccgagg
     1741 tcgggatcca cctggatgcc ttcgggctgc accacgatgc gactcacctt gggagtcgcc
     1801 cccgcccgcg gcttgccgcc gggcgcgggg gccgagtcgg ccggcgactg ccccgcggcg
     1861 ggacgaacgt attgccaggg ggtacagttc tcgggcgcga gccgcccccg ggtcatcgcg
     1921 gcgacgcagg agtagccgga cgcggtctcc ccgggggcgg gcaccggcag gtgcagggtg
     1981 tcggcgtgct cgttggccgg caccgtggcc acctgggatt gcgcgccgtc actgattccg
     2041 acctccaccc gcgtggactc cgcgagctcg ggtccgcgcg gcaggacgag gcgccagttc
     2101 accatcacgc gcagcgagtc gccatcctgc tcgatggtgg agcgcacctc ggtgacctcc
     2161 accgcgcgcg gcagcgtcgg gcgcttgacc ggcaccagga agcggtacgc cacgagaccg
     2221 gcggcgacga ggaagaggag cggcacgatc agccgccgcc agctgcccgg ccgcttgacc
     2281 gggtcgatgt ccacgatctt cggcttccgg ctcactgtcg gtccagcccc agggcgtcga
     2341 gcccctgctc gaagacgatg tccacgggga tcccggcgga gccgagccgg tcgagatcgc
     2401 cctggagggc ggcgggcagc ttcccccgct cggccatgaa gcgctgcacc ccttcgtagt
     2461 cgccatcgcc ctggagccga aggatcagtc ccgccatcga gtccaccgcg gcgcgcatgc
     2521 gggggaagtc cacccggtag cgcccggtcg cggagtcacg ggtgaaggcc ccgcgctcct
     2581 ggagatagga cagctcggcc gcgttcgcac ggccgtgggc gctggcggcg ccgaagcgga
     2641 tggagcggaa gatcccggcg aggaaggtca cgtaattgtc gtcgaggtcc acgtccggca
     2701 gctgcccctg ctcctggagc cgggtgatca tgtagagccc caggatgtcg gccttgccct
     2761 cctccagcgc gccggcctgc tccttgagcg cgtcccgcac cgtaccccgg ccgttgatgg
     2821 tgttcttcac gcccaggccg tgggccacct cgtggaacat cacgttcgcg aagaaggagt
     2881 cgaactcgat gtgctcctgc tggtcctcgg cgatcagctc cttgccgatg ggcaacatga
     2941 tccggtcgaa cttggcccgc atcgcgttct tgagctggag ccggcgggtg cccttcttca
     3001 gctggacctg ctcgtcgttg ggcaggttga tggcgatggt cttggagccg gcgttggcct
     3061 gaccggtgta gtacaccgcg tcgtaggcgt tgagatccga gtcggtgccc ggcgtttccc
     3121 gccggtacgc ctcgggcacc ggcaggccgc gctggagcgc gggcaggaac ttcgcgtagc
     3181 gggcgagccg ctcgctccac tcccgatcct tgatcagcac gtaggcctcg tgggccgcct
     3241 tgtagccgaa gagcgcgtcg tcataggtct cgatcggacc gatgaccacg tcgaggccgt
     3301 tctgcttcat gtccatccag gcgaggtcac tgggccggta gtcgtcggtc tccagcgccc
     3361 gggcgcggag ctcgagatag cggcgcagac ccgcatcgtc ggccagggtg gcggcctccc
     3421 gcagcttcgc cgctgcgcgg cgggagggcc ccgcaacggc ttcgcggtag gggacggcca
     3481 cgagccgccc ggtcgagtcg cgccggacga gggtgtagag gtcccggagg gccttgccgc
     3541 cgtcgggggc ggcgccggcc gcggagtcga actcctcctt ggtcatgtcg gcggggtaga
     3601 aggccgcgcc ggccggccgt gcgcccgtcc ccggcacgaa cggcgcgttg ccgtcgagcc
     3661 ggtcccaggg gccgtagttg aggacgatgt acgcccgggt cgccgagtcg gtgaccgagg
     3721 ccagcaggga gtcccgcgag ggatacacct gctgccagaa gatggagtcc atctcctggg
     3781 ccgcctcgat cagcagcgga atcatctgac gctcccgcgc gctgaggccg cccagctccg
     3841 ccgtgagccg caccggggtg tactgggcga gcttctcggc cgtggccggt gcgctgctgt
     3901 ccgccgcggc cgctcccgcg tccaggtcgc cgccgc
//
LOCUS       DASUYN010000142         6275 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1810048, whole genome shotgun sequence.
ACCESSION   DASUYN010000142 DASUYN010000000
VERSION     DASUYN010000142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6275)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6275)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6275
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1810048"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            388..795
                     /locus_tag="VF061_02770"
     CDS             388..795
                     /locus_tag="VF061_02770"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX6668451.1"
                     /translation="MGQATPAPRAERPPGGYTILVVDDEEAVRRLASRMITWMGNQAL
                     EARHAREALATIEGHHGPIHLVLTDIKMPGMNGRELGRIIEERWPGTPILYMSGFASE
                     VFRDGLLEPGAPFLAKPFTQDDLSSRVRTMLEG"
     gene            1174..2394
                     /locus_tag="VF061_02775"
     CDS             1174..2394
                     /locus_tag="VF061_02775"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX6668452.1"
                     /translation="MRIVCPTYWYPQHANDTQATYVHDINRHLARRGNQVTVVTPGDR
                     SLPAEDSFDGVDVVRFPMELPSDLTYGRVAQGKVSLLGRFARLAVMSHYMEAQYRATV
                     SAARARGADVVHAHWAIPTGPAAVLAARRLDVPCVITMHGGDVYVNPEQGYDFPTRWY
                     VRPPLRWTLRHADALTAITEDCRQHALRAGAPERRIRLIFNGTDLRRFSPSPSGNGVD
                     PRFGPQMVFACRQLFPRKGIRFLVEAVAQLKPRFPELSLVLAGDGFERPALARLAEEL
                     GIAHDVHFLGWVPNSALPPYYRAAALSVVPSLEEGFGIPAAEAMGCEVPVVASDAGGL
                     PEVVEHGVTGLIVPRGDSQALAQAIGSLLEDPDRRRRMGLAGRERALRLFDWDRTAEQ
                     LEDVYREVGAKVSR"
     gene            2391..3248
                     /locus_tag="VF061_02780"
     CDS             2391..3248
                     /locus_tag="VF061_02780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668453.1"
                     /translation="MSERRFVFRWDVDHRVCLTDGIPRIQAVCRDFGVPNTFFVNMGR
                     STNLREWVGRGMVRSKAKLADKDAVHLIQKTGWPRFLLETALARPVGLRFVPLLQELQ
                     REGHELGLHGGMDHVVWSRRFHELPDEVLDADVQESYGHFVRHFGRPDGFTSPGFYSD
                     ARVMRMVERMGFTYDGDAIGGEPRRAVADGDALRHWTIPVTLCGPRTVPFLEYHGARR
                     TPEPQMLDELDRHLADRDLVVLYGHPCYEGVREQVLRTVFARVLERGFRFVTMQALAA
                     RLEGAVPAR"
     gene            3245..4357
                     /gene="wecB"
                     /locus_tag="VF061_02785"
     CDS             3245..4357
                     /gene="wecB"
                     /locus_tag="VF061_02785"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016634935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008761 - UDP-N-acetylglucosamine
                     2-epimerase activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HEX6668454.1"
                     /translation="MIRVLSVFGTRPEAIKMAPVIHRLEARPEHFESVLCVSAQHRDM
                     LDQVLDVFHLRPDHDLEIMTPGQSPAGVAARVLDRLPPLLREIRPDVLLVQGDTMTTF
                     AASFAAYLERIPSCHVEAGLRTGNRYHPFPEEMNRVLTTRLADLHFAPTATARDRLLA
                     EGVPADTVLLTGNTVIDALLSTVRQDYRFTTPALVALDPQARLVLVTTHRRESFGAPL
                     RSTCAAIADLVARFPDVEVVLPVHPNPNVKEAVEALLCDTPRVRLIAPVDYVEFVHLM
                     ARSHLILTDSGGVQEEAPSLGKPVLVLRETTERPEGVEAGTAVVVGTDRERIVATASQ
                     LLSSDEAYQRMANAVSPYGDGKASDRIVAALEQRYG"
     gene            4354..5355
                     /locus_tag="VF061_02790"
     CDS             4354..5355
                     /locus_tag="VF061_02790"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX6668455.1"
                     /translation="MRLLVTGGTGFIGSHLAERGRKLGAEVVVLGLTERPEERANVEL
                     LRRQGVEVLAGSITDPELCGRAVRGATHVFHLAVAMREGAKSDQYFEAINLDGTRALL
                     DASARGGVRRFVYCSTIGIYGHRAPGVTREDSPLAPGNIYERTKVAAERLVRELGSER
                     SLPWTILRPADVYGPRDHRLLKLFKGVAAGRFPLFGAGEGRRHMIYVDDVVSGFFRAC
                     EREHALGEGLILAGPKPCTLRELIAEVQRATGSRRFGFRLPLGPMLAVAGAVEDVSRV
                     LGVEPPIYRRRMDFFWSDSEFDTTRARQTLDWAPQVDLPEGIRRTLEDYRSSGALAA"
     gene            5352..6179
                     /locus_tag="VF061_02795"
     CDS             5352..6179
                     /locus_tag="VF061_02795"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX6668456.1"
                     /translation="MTTGRTPAAEPWQISLFHRSLKKKETMKALLDHLPAVEGRACLE
                     LGCGTGLTSYFLRQRGGTWTSCDFERDHVRSAKGLVGDRVVHIDERSLPFPSAAFDVV
                     AAINFLEHIEDDDRFFAEMVRVLKPGGEFLFMAPKGEHGRAGFALKRVLGFTADQEGF
                     GHARDGYPPALARSLMERHGLTVRGVDSYCRVFTESLEDLLNYAYHRKAMKDKKPAEQ
                     DFHGDTAPMSAEALNKVGTAYKVYSAIYPALRAWTMLDRLIPFSPGYMMVARAYKAA"
BASE COUNT          913 a         2198 c         2211 g          953 t
ORIGIN      
        1 cgtgatccgc ctctgggagg ccgcgatcgg gggcggtgca gcggaccccg aggtcactcc
       61 ggacggtgtc gtgagcggtc ctagcaggcg gcgagggcga gagagcaaag cgatccgcgg
      121 cggcagaacc ggaggcatca atggctggag gccgtgcgac aagatgggcc ccgaagaccg
      181 aaggttgtct gaacgcggcg tgaagggatc atcaccgggc ggcagactgt cgggggcgtt
      241 ctccatgctc ggtcggagcg ccctcttgcg tggtggatga agggcatggc ctgtcgcccc
      301 ccgttcggat cttgcgacca tcgcccggga tcaggtacct tcgcggggca caccatgcct
      361 tcaccgcgaa gcagccctac cacgccgatg ggacaggcca ctcctgctcc ccgggccgag
      421 cgtccccccg ggggctacac catactcgtg gtggacgacg aggaggcggt tcggcgactc
      481 gcctcccgga tgatcacctg gatggggaac caggccctcg aagcgcgcca cgcgcgggaa
      541 gcactcgcga ccatcgaagg acaccacggg cccatccacc tcgtcctcac cgacatcaag
      601 atgcccggca tgaacgggag ggagctgggc cggatcatcg aggagcgctg gccggggacg
      661 ccgatcctct acatgtcagg cttcgcatcc gaggtgttcc gcgacgggtt gctcgagccc
      721 ggcgccccct tcctggcgaa gccattcacg caggacgacc tctcctcccg ggtgcggacg
      781 atgctggagg gttagctccg cgtacgtccc cggcccaccc ggggtaacag ccatcactgc
      841 acaatcttgc gaaaccgttt aaaatgccgg accgagttcg ggccccgtcg ccgggttccg
      901 tgcatcggcc cccagcatag cggagacccg gttacggcac cggggcggca gccggtgttg
      961 caccgccccg gcagcccacc ttccggcacc tgcccactgg caccttccgg gggcctctgg
     1021 aggcggcgat atggcatgga tgttgaactt acggcggcct ccgccgcccg cgaacacatg
     1081 gtatcttttc agggaacgcc gatgacgaga ggggcgcttg gggtcgagac accgcgagtg
     1141 cccctgccta gcccagggcg gccgggagcc cctttgcgca tcgtttgtcc cacctactgg
     1201 taccctcagc acgccaacga cacccaggcg acctacgtcc acgacatcaa ccgccatctg
     1261 gcgcggcgtg gcaaccaggt caccgtggtc acgccggggg accgatccct tcccgccgaa
     1321 gacagcttcg acggcgtgga cgtggtccgg ttcccgatgg agctcccgtc cgacctcacc
     1381 tacggcaggg tggcgcaagg gaaggtgagc ctgctcggcc ggttcgcccg gctcgccgtg
     1441 atgtcccact acatggaggc gcagtaccgg gccaccgttt ccgcggcgcg cgcccggggg
     1501 gccgacgtgg tgcatgccca ctgggcgatc cccaccggtc cggccgccgt gctcgccgcc
     1561 cggcggctcg acgtcccctg cgtcatcacg atgcacggcg gcgacgtgta cgtgaacccg
     1621 gagcagggct acgatttccc cacccgctgg tacgtccgcc caccgctccg gtggacgctg
     1681 cgccacgcgg acgcgctcac cgcgatcacc gaggactgcc gccagcacgc gctccgcgcc
     1741 ggcgcgcccg agcgccgtat ccggctcatc ttcaacggca ccgatctccg ccgcttcagc
     1801 ccgtcgccca gcggaaacgg ggtggacccg cgcttcgggc cgcagatggt cttcgcctgc
     1861 cggcagctgt tcccccgcaa gggcatccgc ttcctggtgg aggccgtggc ccagctcaag
     1921 ccgcggtttc ccgagctcag tctcgtgctc gccggcgacg gcttcgagcg ccccgccctc
     1981 gcccggctcg ccgaggagtt gggcatcgcc cacgatgtcc acttcctcgg ctgggtgccc
     2041 aactccgcgc tgccgcccta ctatcgggcc gccgcattgt cggtggtgcc gtcgctggag
     2101 gagggcttcg gcattccggc cgccgaggcg atgggctgcg aggtgccggt ggtggcgagc
     2161 gatgccggcg gcctccccga ggtggtggag cacggcgtca ccgggctcat cgtgccccgc
     2221 ggggacagcc aggcgctcgc tcaggccatc ggctcgctcc tggaggaccc ggatcgccgg
     2281 cgcaggatgg gcttggccgg ccgtgagcgg gcgctgcggc tcttcgactg ggatcgcacc
     2341 gcggagcagc tcgaggacgt gtatcgcgag gtcggcgcga aggtgagccg gtgagcgagc
     2401 ggcggttcgt cttccggtgg gacgtggatc accgggtctg tctcaccgac ggcatcccgc
     2461 gcatccaggc cgtgtgccgc gacttcgggg tgcccaacac cttcttcgtc aacatgggac
     2521 ggtccaccaa cctccgcgag tgggtgggga gagggatggt ccgatccaag gccaagctcg
     2581 ccgacaagga cgcggtgcac ctgatccaga agaccggctg gccgcgcttt cttctcgaga
     2641 ccgcgctggc gagaccggtc gggctccgct tcgtcccgct gctccaggag ctgcagcgcg
     2701 aggggcacga gctcggcttg cacgggggga tggaccacgt ggtgtggagt cgccggtttc
     2761 acgagctgcc ggacgaggtg ctggacgctg acgtgcagga gtcctatggg cacttcgtgc
     2821 ggcacttcgg gaggccggac ggcttcacct ctcccgggtt ctactccgat gcccgggtga
     2881 tgcggatggt cgagcggatg gggttcacct acgatggcga tgcgatcggg ggggagcccc
     2941 gccgcgccgt cgcggacggc gacgcgctcc ggcactggac catcccggtg accctgtgcg
     3001 ggccccgcac ggtccccttc ctggagtatc acggcgcgcg gcgcacgccg gagcctcaga
     3061 tgctggacga gctcgaccgg cacctcgcgg atcgcgacct ggtggtcctg tacggccatc
     3121 cctgctacga gggcgtgcgc gagcaggtgc tgcgaacggt gttcgctcgg gtactggagc
     3181 gcggcttccg tttcgtcacc atgcaggcgc tcgcggcccg gctcgaagga gccgtacccg
     3241 cccgatgatt cgggtgctca gcgtcttcgg caccaggccg gaggcgatca agatggcgcc
     3301 cgtgatccac cggctcgagg cgcggcccga gcacttcgag agcgtcctgt gcgtgtccgc
     3361 gcagcaccgt gacatgctcg accaggtgct ggacgtcttc catctccgac ccgaccacga
     3421 cctggagatc atgacgcccg ggcagtcgcc ggcgggggtc gcggcgcggg tgctcgaccg
     3481 gctgcccccg ctcctgcgcg agatccggcc cgacgtcctg ctggtgcagg gcgataccat
     3541 gacgacgttc gccgcctcct tcgccgcgta cctcgagcgg atcccctcct gccacgtcga
     3601 ggccggtctc cgcaccggca accggtatca ccccttcccg gaggagatga accgcgtgct
     3661 caccacgcgg ctggccgacc tgcacttcgc ccccacggcg accgcccgag accggctgct
     3721 ggccgaaggc gtccccgccg acacggtcct gctcaccggc aacacggtca tcgacgccct
     3781 cctgagcacg gtgcggcagg actaccgctt caccaccccc gcgctcgtgg cgctggaccc
     3841 gcaggcacgg ctggtgctgg tcacgacgca tcggcgggag agcttcggcg cgccgctgcg
     3901 cagcacctgc gccgcgatcg ccgatctggt ggcccggttt cccgatgtgg aggttgtgct
     3961 gccggtgcat cccaatccca atgtgaagga agcggtcgag gcgttgctgt gcgacacccc
     4021 ccgggtacgc ctgatcgcgc cggtggacta tgtggagttc gtccacctca tggcgcgatc
     4081 gcacctcatc ctcaccgaca gcggtggcgt gcaggaggag gcccccagcc tcggcaagcc
     4141 ggtgctggtg ctgcgggaga cgacggagcg gcccgagggc gtcgaggcgg gaaccgcggt
     4201 ggtcgtcggc accgacaggg agcggatcgt ggcgaccgcg tcccagctcc tgtcctccga
     4261 cgaggcctac cagcggatgg ccaacgccgt gagtccctat ggggacggga aggcgagcga
     4321 tcggatcgtc gccgccctgg agcagcgcta cggatgaggc tgctggtgac gggcgggacc
     4381 ggcttcatcg ggtcgcacct cgcggagcgg ggacggaagc tcggcgccga ggtcgtggtg
     4441 ctgggactga ccgagcgtcc cgaggagcgg gccaacgttg agctgctccg gcggcagggg
     4501 gtagaggtgc tggcgggcag catcaccgat ccggagctct gcgggcgcgc ggtgcgcggc
     4561 gcgacccacg tcttccacct ggccgtggcg atgcgggaag gggccaagag cgaccagtac
     4621 ttcgaggcca tcaacctcga cggcacgcgc gccctgctgg atgcctccgc ccgcgggggc
     4681 gttcgccggt tcgtgtactg cagcaccatc gggatctacg ggcaccgggc gcccggcgtg
     4741 acccgcgagg attcgccgct ggcgccgggg aacatctacg agcgcaccaa ggtcgccgcc
     4801 gagcggctgg tgcgggagct ggggtcggag cgctcgctcc cctggacgat cctgcgcccg
     4861 gccgacgtgt acggtccccg cgaccaccgg ctcctcaagc tgttcaaggg cgtggccgcc
     4921 gggcgattcc ccctgttcgg cgcgggcgaa ggccggcgcc acatgatcta cgtggacgac
     4981 gtcgtctccg gcttcttccg ggcctgcgag cgcgagcacg cgctcggcga agggctcatt
     5041 ctcgcgggac cgaagccgtg tactcttcgg gagctgatcg ccgaggtgca gcgggccacg
     5101 ggaagccgcc gcttcggctt caggctcccg ctgggcccga tgctggccgt cgccggtgcg
     5161 gtggaagacg tctcccgggt gctcggcgtc gagcccccga tctaccgccg gcggatggat
     5221 ttcttctgga gcgactcgga gttcgacacc acccgcgccc ggcagacgct ggactgggcg
     5281 cctcaggtgg acctgccgga gggcatccgg cgcacgctgg aggactaccg gagctcgggg
     5341 gccctcgccg catgaccaca ggacgcacac cagccgcgga gccctggcag atcagcctct
     5401 tccaccgctc gctgaagaag aaggagacga tgaaggcgct gctcgaccac ttgccggcgg
     5461 tcgagggacg cgcgtgcctc gagctgggct gcggcaccgg gctcacgtcg tactttctcc
     5521 gtcagcgagg cggcacctgg accagctgtg acttcgagcg cgaccacgtg cgctccgcga
     5581 agggcctggt cggcgaccgg gtggtccaca tcgacgagcg ctcgctgccg ttcccctcgg
     5641 ctgccttcga cgtggtcgcc gcgatcaact tcctcgagca catcgaggac gacgaccgct
     5701 tcttcgccga gatggtgcgg gtcctcaagc cgggcgggga gttcctgttc atggcgccca
     5761 agggcgagca cgggcgggcc gggttcgcgc tcaagcgggt attgggcttc acggccgacc
     5821 aggagggctt cggccacgcg cgcgacggct atcctcccgc cttggcgcgg tcgctgatgg
     5881 agcggcacgg cctcacggtg cgcggcgtgg acagctactg ccgcgtcttc accgagtcgc
     5941 tcgaggacct gctcaactac gcctaccacc gcaaggcgat gaaggacaag aagccggccg
     6001 agcaggactt ccacggcgac accgcgccga tgtcggcgga ggcgctgaac aaggtgggca
     6061 ccgcgtacaa ggtgtactcc gccatctatc ccgccctcag ggcgtggacc atgctcgacc
     6121 ggctcatccc gttctccccg ggctacatga tggtggcccg cgcctacaag gcggcctgag
     6181 catgtgcggc atcgtcggtc gggtgggcac ggcacccgtg ggggagctcg agatccgccg
     6241 gatgtgcgac gcgatccggc accgcggccc ggacg
//
LOCUS       DASUYN010000143         4344 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1810173, whole genome shotgun sequence.
ACCESSION   DASUYN010000143 DASUYN010000000
VERSION     DASUYN010000143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4344)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4344)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4344
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1810173"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1078)
                     /locus_tag="VF061_02800"
     CDS             complement(<1..1078)
                     /locus_tag="VF061_02800"
                     /inference="COORDINATES: protein motif:HMM:NF037667.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family aminopeptidase"
                     /protein_id="HEX6668457.1"
                     /translation="MPVPFRLLTPAFLAAATAAPAASAAQTNLARVVNGAFTPSHDYD
                     LIHQRIEVRNFDWDSASFDGRVATTVISLRPGLQAVVLDMERRLEVRSVTAGGKALPY
                     DRPSDSLVVRLARPAKLRDTVRFTVDYHAPIAQGRGLYFFREEPGRPHRPQQVYSGGG
                     TDGNPRWLPTLAAPHDKATWELIATVPARLTVVSNGRLVSDRTVARRLRTTHWAQEKP
                     ASTYLISLVAAPLVRIQDRWRDVPLSYYVYPEDSALARPLFEMTPDVMETFTRLTGVP
                     YPWNKYAQATAADFIGGMENVGATTLVDWLPDPRAYRDRPWYRVTLIPHELAHQWFGN
                     LVTAENWANYWLHEGFSQFMPGQYW"
     gene            1718..1999
                     /locus_tag="VF061_02805"
     CDS             1718..1999
                     /locus_tag="VF061_02805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668458.1"
                     /translation="MTRTHKPVGDAREAVQTAVEFLEEEERWVLLQRWLEQETAGLSQ
                     AANRSLRLETLRSIVCPRIGDREWDSIVREHRKVEWAGELRRANARSAW"
     gene            complement(2030..2671)
                     /locus_tag="VF061_02810"
     CDS             complement(2030..2671)
                     /locus_tag="VF061_02810"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: protein motif:HMM:NF000595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HEX6668459.1"
                     /translation="MAVRPSLKRERAAWADERLIVGVDEAGRGPLAGPVVAAAVVFPA
                     GCTAVRGLRDSKLLPPRVRLRLAQRVRQRALGYAIGAASSREIDRLNIRVATALAMRR
                     AICRLVSRGPLAGGCAHRILIDGLPLPEIGYEHEALVDGDARCQSIAAAAVLAKTCRD
                     LLMHRLAPRHPGYGWDTNVGYGTEEHQLGLRLHGPTRHHRVTFAPLAQLVLFQ"
     gene            complement(2675..3022)
                     /gene="rplS"
                     /locus_tag="VF061_02815"
     CDS             complement(2675..3022)
                     /gene="rplS"
                     /locus_tag="VF061_02815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010334229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HEX6668460.1"
                     /translation="MERLAEVAREGLRTDIPAFDPGDTVRVMVRVREGDKERLQAFEG
                     LVIARRGGGISETFTVRKISAGVGVERLFPMHSPTIASVELVRRGRVRRAKLYYLRAL
                     SGKAARIREKREG"
     gene            complement(3100..3786)
                     /gene="trmD"
                     /locus_tag="VF061_02820"
     CDS             complement(3100..3786)
                     /gene="trmD"
                     /locus_tag="VF061_02820"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: protein motif:HMM:TIGR00088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052906 - tRNA
                     (guanine(37)-N1)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HEX6668461.1"
                     /translation="MLTIDVVTLFPDVIAPFASASIPGRAAAAGLVRYNLVQLRDFTH
                     DRHQTVDDYAYGGGAGMVLKPEPFFEAVDSLGASGPIVLLSARGRRFGHDDAVRFSLG
                     ERLTLLCGHYKDVDQRVADGLATEELSVGDFVLSGGEAAALCVLDAVVRLLPGAMSDH
                     ESASSDSHYDGLLSPPSYTRPAEYRGLAVPEVLLSGDHARIAAWRQAEAERLTRERRP
                     ELWERYQGQG"
     gene            complement(3882..>4344)
                     /gene="rimM"
                     /locus_tag="VF061_02825"
     CDS             complement(3882..>4344)
                     /gene="rimM"
                     /locus_tag="VF061_02825"
                     /inference="COORDINATES: protein motif:HMM:TIGR02273.1"
                     /note="Essential for efficient processing of 16S rRNA;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HEX6668462.1"
                     /translation="TLFPLTDDPAAVFVPGRPVWLVGLDGEEVAGPLTIERSRAYHRA
                     WLVKFEGADSRDALGPWRGLFLSVPAEQLTPPSGDEVYLHELEGFSVRLPDETPLGLV
                     SAVYELPAGVMIEVQGPKREFLLPYKKEFVRSVDREGRRLVVTPPEGLVEE"
BASE COUNT          680 a         1521 c         1515 g          628 t
ORIGIN      
        1 cccagtactg ccccggcatg aactgggaga atccctcgtg cagccagtag ttggcccagt
       61 tctccgcggt gaccaggttg ccgaaccact ggtgggccag ctcgtgcggg atgagggtga
      121 cgcgatacca gggccggtcc cgataggcac gcggatccgg cagccagtcc accagcgtgg
      181 tcgcgccgac gttctccatc ccgccgatga aatcggcggc ggtggcctgg gcgtacttgt
      241 tccacgggta cgggacgccg gtgaggcggg tgaaggtctc catgacgtcc ggcgtcatct
      301 cgaacagcgg ccgcgccagg gcgctgtcct cggggtagac gtagtaggag aggggaacgt
      361 cgcgccagcg gtcctgaatc cgcaccagcg gagcggcgac gagcgagatg agataggtgg
      421 aggcgggctt ctcctgggcc cagtgcgtcg tccggagtct gcgggcgacg gtccggtcgc
      481 tcaccagccg cccgttggac acgacggtga ggcgggcggg cacggtggcg atcagctccc
      541 aggtcgcctt gtcgtgcggc gcggcgagcg tgggcagcca gcgcgggttg ccgtcggttc
      601 caccgccgct gtacacctgc tgcggccggt gcggccgtcc cggctcctcc cggaagaagt
      661 agagccccct gccctgcgcg atgggcgcgt gatagtccac ggtgaagcgc accgtgtccc
      721 tgagcttcgc gggccgagcc agccggacga cgagcgaatc cgagggtcgg tcgtagggca
      781 gtgccttccc tccggccgtc accgaccgaa cctccaggcg ccgctccatg tcgaggacga
      841 ccgcctgaag tcccggccgc agcgagatca ccgtcgtggc cacgcgcccg tcgaacgacg
      901 cggagtccca gtcgaagttc ctcacctcga tgcgctgatg gatcaggtca tagtcgtgcg
      961 acggcgtgaa ggcgccgttc accacgcgcg cgaggttggt ctgcgcggcg gaggcggccg
     1021 gcgcagccgt agcggcagcg aggaaagctg gagtgagaag gcggaagggt acgggcatgc
     1081 cggaagatag cggcggaagg ccggaccctc ggcgtctgga gaatcccggt gggcggcatg
     1141 cggcgagagg aagctctcca cccgccggtt tcccatccga tttacctcgt tcgggcaacc
     1201 tccggcggca tccactgcag gagcctgcca ggctggacct tgaagaagcg gcacagctcg
     1261 tcgagggtct cggcgtgcag gcggccgaaa cgaccgccgg cacgggagag ccggtaggcg
     1321 ctcggataag tcagatcggt acccttggac aggctatacg cggtaatgcc acgcgccgcc
     1381 atgagttcat gtactcgcag tcgcaccata agacctttcg aggggaaacg cctgatatcg
     1441 gtgtacagcc ttgcgctata tagctctgta gtataccatg caggtggtcc aatagccatc
     1501 gcccaatggc gcgatggtcc cccaagccct cgcgttactc cgccccacct ccgggaccca
     1561 gcgattcgag agcgcacctc cagttcggag ggcggctcgt ggctcgaccg acctcatcca
     1621 cggcttcacg catccagtcc gacaccgtcg cgcgcatcct cgggggagtg cgcacggagc
     1681 tgccggcgac gaccggatgc gaggagaagg aggccccgtg acgcgcacgc acaagccagt
     1741 gggcgatgcc agggaggcgg tccagaccgc agtcgagttc ctcgaggagg aggagcgatg
     1801 ggttctcctg cagcggtggc tggagcagga gacggccggc ctgagtcagg ccgccaatcg
     1861 gtccctgagg ttggagaccc tccgcagcat cgtgtgcccg cgaatcgggg atcgcgagtg
     1921 ggacagtatc gtgcgcgaac atcggaaggt cgaatgggct ggcgagctgc gtcgggcgaa
     1981 tgctcgttcc gcgtggtaag ccaggcggtg catgccggcg ctgccgaacc tactggaaca
     2041 ggacgagttg tgccaacggc gcgaacgtga cccggtgatg ccgggtgggg ccgtggagtc
     2101 gaaggccgag ctgatgctcc tcggtgccgt agccgacgtt ggtgtcccag ccgtagccgg
     2161 ggtgccgcgg tgccagacga tgcatcagga ggtcgcggca ggtcttggcc agcacggcgg
     2221 cggcggcgat ggactggcac ctggcgtcgc cgtccaccag cgcctcgtgc tcgtagccga
     2281 tctcggggag cgggaggcca tcgatcagga tgcggtgggc gcacccaccg gccaggggcc
     2341 ctcggctgac cagccggcag atcgcgcgtc gcatcgcgag ggcggtggcg acccggatgt
     2401 tcaggcggtc gatctcgcgc gaggaggcgg caccgatggc gtagccgagg gcccgctggc
     2461 ggacccgctg ggccaggcgc agccgaaccc gcggggggag gagcttgctg tcgcgcagcc
     2521 cgcgcaccgc cgtgcagccg gccggaaaca cgacggccgc ggcgaccacc ggtcctgcca
     2581 gtgggccccg gcccgcctca tccacaccga cgatcagccg ctcgtcggcc caggccgccc
     2641 gctcccgttt cagcgagggg cgtaccgcca ccgctcagcc ctcgcgcttc tcccggatcc
     2701 gggccgcctt gccgctcagg gcgcggaggt agtacagctt ggcccggcga acccggcccc
     2761 ggcgcaccag ttccaccgac gcgatggtcg ggctgtgcat ggggaagagc cgctccacgc
     2821 cgacgccggc ggagatcttc cgcaccgtga aggtctcgct gatgccgccg ccccggcggg
     2881 cgatcaccag gccctcgaat gcctggagcc gctccttgtc gccctcgcgg acgcggacca
     2941 tgacgcggac ggtgtcaccg gggtcgaatg caggaatgtc cgtgcgcaag ccctcacggg
     3001 ccacttctgc caacctttcc atggtagaac ctccgcgctg ttgtgccgca ttgaacttgt
     3061 cgaactgcac cgccgtccgc cactgcctgt gttacgccgc tagccttgcc cctgataccg
     3121 ctcccacagc tccggccgcc gctcccgggt gagccgctcc gcttccgcct ggcgccaggc
     3181 cgcgatccgg gcgtggtcgc ccgagagcag cacctccggc acggcaagcc cgcggtattc
     3241 cgcggggcgg gtgtagctcg gcgggctcag cagcccgtcg taatgcgagt ccgagctggc
     3301 ggactcgtgg tcgctcatcg cgcccggcag cagccgcacc accgcgtcca gcacgcagag
     3361 cgccgccgcc tcgcccccgg agagcacgaa gtcaccgacc gacagctcct ccgtcgcgag
     3421 cccatccgcc acccgctggt ccacgtcctt gtagtggccg cagagaagcg tgagccgctc
     3481 gcccagcgag aaccgcaccg cgtcgtcgtg cccgaaccgt cggccgcgcg ccgagagcag
     3541 cacgatggga ccgctcgcgc cgaggctgtc caccgcctcg aagaagggct ccggcttgag
     3601 caccatcccc gcgccaccgc cgtacgcgta gtcgtccacc gtctggtggc ggtcgtgggt
     3661 gaaatcgcgc agctggacca ggttgtaccg caccagtccg gccgccgccg cccgccccgg
     3721 aatgctcgcg ctcgcgaagg gcgcgatgac gtcggggaac agggtgacga cgtcgatcgt
     3781 cagcatggcg cgaccgccga tgtcatcctg agcgcggcga aggagtcgaa gtcctggtca
     3841 tggccccttc gctgtgctca gggtgacaat gccgctcccc ctcactcctc gaccagcccc
     3901 tccggcggtg tcaccaccag ccggcggccc tcccggtcca cgctccgtac gaactccttc
     3961 ttgtacggca gcaggaactc gcgcttcggg ccctgcactt cgatcatcac ccccgccggc
     4021 agctcgtaga ccgcgctcac caggccgagc ggggtctcgt ccggcagccg gaccgagaat
     4081 ccctcgagct cgtggaggta gacctcgtcg cccgacggcg gcgtcagctg ttccgccggc
     4141 accgagagga acagcccccg ccaggggccg agggcgtcgc ggctgtccgc cccctcgaac
     4201 ttcaccagcc atgcgcggtg gtacgcccgg ctccgctcga tggtcagcgg ccccgcgacc
     4261 tcctcgccgt ccagccccac cagccacacc ggcctgccgg ggacgaagac cgcggcggga
     4321 tcgtcggtga gcgggaagag ggtg
//
LOCUS       DASUYN010000144         2815 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_267262, whole genome shotgun sequence.
ACCESSION   DASUYN010000144 DASUYN010000000
VERSION     DASUYN010000144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2815)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2815)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2815
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_267262"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1246
                     /locus_tag="VF061_02830"
     CDS             <1..1246
                     /locus_tag="VF061_02830"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEX6668463.1"
                     /translation="EILRAALGAYKDTIVVVMTGNPSVTSSIEALRAGAWDYLPKPFS
                     ATHLQVLIGRASHAVMMSREAQDLRVQLMKQHGHSEKIALIGISPTFRKAVELARKVA
                     PTDASVFISGESGTGKEVIAQFIHQNSRRAGRALVPINCAALPEGLLESELFGHRKGA
                     FTGADRDKPGLLETANGGTLFLDELTEMTMPLQAKLLRVIQDGVVRRVGSEQQDAVVD
                     VRFVSATNREPQEAVDAGILRGDLFYRLRVVPIKLPPLRKRPEDIPLLANHFLTYYWQ
                     RHRQMGDRAPRLSEASIGFLRSRPWRGNVRELQNVIEHVAVLAEPDQVIQPNDIPVYD
                     DGAEWPAESPVPSGVMDEAYHPAKDRVVAQFEKEYLTRLVSRAGGNMSKAARLASIDR
                     TTLYRLMDKHEFHREESAGSSE"
     gene            1243..2421
                     /locus_tag="VF061_02835"
     CDS             1243..2421
                     /locus_tag="VF061_02835"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEX6668464.1"
                     /translation="MTPETAVSTLTSGERRRGSPGAGTAAPKLWDPEAPRPAALGPAL
                     WDALHRAVLGTQTQWERAVEHASGAEEVAAHLAQLSTAVRQQLMGPLAETVEVARTSL
                     SRRLLSLMRGAFLEQVQSLQPLPEAGQLLRVLGAMEQVSERLEADWSQHFTDRLSAPD
                     GLELVVEVAHDLRSPLTSILFLAETLQRGRSGPVNPVQERQLGLIYSAAFGLSSVASD
                     VIELARGGDRLVDLDPIPFSVTDILESVRDIVQPIAEEKSLTVRLTPPESDFRIGHPV
                     ALSRVLLNLTTNALKFTAEGHVEVVARQAAARRLEFSVRDTGRGIPPQSMATLFEPFR
                     RRQKPGEYAFSGSGLGLSICRKLVEAMGSTLQVETQQGAGTRFYFELDLPLAGDTHVG
                     "
BASE COUNT          442 a         1007 c          957 g          409 t
ORIGIN      
        1 ggagattctc cgggctgcgc tgggcgcgta caaggacacg atcgtggtgg tgatgacggg
       61 gaatcccagc gtcaccagca gcatcgaggc gctccgcgcc ggcgcctggg actacctgcc
      121 caagcctttc tccgccaccc atctccaggt cctcatcggt cgtgcctccc acgcggtgat
      181 gatgtcccgc gaggcgcagg acctccgcgt gcagctgatg aagcagcacg ggcacagcga
      241 gaagatcgcg ctcatcggca tctcgcctac cttccgcaag gccgtggagc tggcgcgcaa
      301 ggtggcgccc accgacgcgt ccgtgttcat cagcggcgag agcggcaccg gcaaggaagt
      361 gatcgcccag ttcattcatc agaacagtcg ccgcgccggg cgcgcgctgg tgccgatcaa
      421 ctgcgccgcg ctgccggagg ggctgctgga gagcgagctg ttcggccatc ggaagggcgc
      481 cttcaccggg gccgaccgcg acaagccggg cctgctggag accgccaatg gcgggaccct
      541 cttcctcgac gagctcaccg agatgaccat gccgctccag gcgaagctgc tccgggtcat
      601 tcaggacggc gtcgtccggc gggtcggaag cgagcagcag gatgcggtgg tggacgtccg
      661 attcgtgtcg gccaccaacc gggagcccca ggaggcggtg gacgcgggca ttctgcgagg
      721 cgatctcttc taccggctgc gggtggtgcc gatcaagctc ccgccgctgc gcaagcggcc
      781 ggaggacatc ccgctcctgg ccaatcactt cctcacttac tactggcagc ggcaccgcca
      841 gatgggcgac cgggctccgc ggctcagcga ggccagcatc ggcttcttgc gctcccgacc
      901 ctggcgcggc aacgttcgag agctgcagaa cgtcatcgag cacgtcgcgg tcctcgccga
      961 gccggatcag gtcatccagc cgaatgacat tccggtctac gatgacgggg cagagtggcc
     1021 ggcggagagc cccgtcccct ccggcgtcat ggacgaggcg taccacccag ccaaggaccg
     1081 cgtggtggcc cagttcgaga aggagtacct gacccgcctg gtcagtcgtg ccggtggcaa
     1141 catgtccaag gccgcccggc tggccagtat cgaccgtacc acgctgtatc ggctgatgga
     1201 caagcacgag ttccaccgcg aagagagcgc cggatcgagc gagtgacccc cgagactgcg
     1261 gtctccaccc tgaccagcgg tgagcgccgc cggggatcgc ccggcgcagg caccgccgcg
     1321 cccaagctct gggatcccga ggctccccgt ccggcagccc tgggcccggc gctgtgggac
     1381 gcgctgcacc gggcggtcct cggcacccag acgcagtggg agcgggccgt ggagcacgcc
     1441 tccggtgccg aggaggtcgc ggcccacctg gcccagctct ccaccgcggt acggcagcag
     1501 ctcatggggc cgttggcgga gacggtggag gtcgcccgga cttcgctctc ccggcgactc
     1561 ctgagcctca tgcggggcgc cttcctggag caggtccaga gtctccagcc gctgcccgag
     1621 gccggccagc tccttcgggt gctcggcgcc atggagcagg tgagcgagcg gctcgaggcc
     1681 gactggtcgc agcacttcac cgaccgtctc tccgccccgg acgggctcga gctggtggtc
     1741 gaagtggccc acgacctccg ctcccccctc acctccattc tcttcctcgc cgagaccctg
     1801 cagcgcgggc gcagcgggcc ggtgaatccg gtgcaggagc gccagctggg cctgatctac
     1861 agcgcggcgt tcggtctcag ctcggtggcg agcgacgtga tcgagctcgc ccgcgggggc
     1921 gaccgcctgg tggacctcga tccgatcccg ttctcggtca ccgacatcct ggaatcggtc
     1981 cgcgacatcg tgcagccgat cgcggaggag aagagcctca cggtccggct gactcctccc
     2041 gaatcggact tccggatcgg ccatcccgtg gcgctgagcc gggtgctgct gaacctcacc
     2101 accaacgccc tcaagttcac cgccgaaggc cacgtcgagg tggtcgcgcg gcaggcggcg
     2161 gcgcggcggc tggagttctc ggtgcgcgat accgggcggg ggattccgcc ccagtccatg
     2221 gccacgctct tcgagccgtt ccgccgccgg cagaagccgg gcgagtacgc cttctcgggg
     2281 tcggggctgg ggctctcgat ctgccgcaag ctggtcgagg cgatgggctc gaccctccag
     2341 gtggaaaccc agcagggcgc gggcacccgg ttctacttcg agctggacct gccgctcgcg
     2401 ggcgacaccc acgtcggcta gaccctacca cccctagttc ccctccgcta aattcttggc
     2461 gctggccacc ctgtgaggca gtgctgttgc gcgaaccggc gacccggccg gcgccgcgca
     2521 gccgaaaccc ggcacttccg ccgcaggagg cgacagcgtg accccatgcg ggtctccgcc
     2581 ccccagcgtc gctccaccga cctgccgagg accgggtccg gccaggtgtc gtgagcgacg
     2641 gggagggggc gtggggcccg aaacgagaga gacgtgaacc gaccgttgat acggcccggc
     2701 cggcacctga gccaggcccc cgtgcacgcc ccgaacgccg ccctgctgat cgacttcgac
     2761 aacgtcaccc tgggcatcca aaaagacctg acgaaggagc tccggacact cctca
//
LOCUS       DASUYN010000145         2393 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1369636, whole genome shotgun sequence.
ACCESSION   DASUYN010000145 DASUYN010000000
VERSION     DASUYN010000145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2393)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2393)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2393
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1369636"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..995
                     /locus_tag="VF061_02840"
     CDS             <1..995
                     /locus_tag="VF061_02840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668465.1"
                     /translation="NFYVNPITPAGGAGLKYLAVSPDHQHVWSVATDGTLWRHNPAGG
                     WLQAPAAGKVSLPLEDLTVDESNSVWMTGQIGTIWRTSDGTSFQDATVLIGFKRLAVG
                     RGDYSLWGIAANGSLWWHYRPTRTWYPTNGTNMEDLSVTYEGVVWLVDRGGRVWTTRD
                     GQTLQPNPGTGFRRISAGRYSIVYGVKTDGTLWMWAITPSTPPSQSGGGGGGGGGGGG
                     GGGGGGGSGGQTVPAAPSVGCSTSGADVFIISGSGFLANSQVTIKGANIIYGQANNVY
                     WITSASSTGTISQSLTIPCVPGVQINFSATDGRSNPNDWTGKLWSNTVTCSCPA"
     gene            complement(1383..2084)
                     /locus_tag="VF061_02845"
     CDS             complement(1383..2084)
                     /locus_tag="VF061_02845"
                     /inference="COORDINATES: protein motif:HMM:NF015925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HEX6668466.1"
                     /translation="MPFRRIVPLALGAAAVLSTTAVAQDPVPVYPGNYQVLIENEQVR
                     VLDFRLRKCDSEDFHSHPAHVLYVLEPFRIRFRFPDGRTGMRETRAGEVLFSEAVTHS
                     PVNVGDTDAHGILVELKTPAARQAMREAAPDNVLTAVTFIQGREGKAREVKQELLSLT
                     APTRAEAGNIGYDLYQSVDQPDRFMRLEVWRDAGALELHKATPHLRASFERRKNEGWM
                     TEITRWERVPEERGR"
BASE COUNT          377 a          812 c          827 g          377 t
ORIGIN      
        1 ccaacttcta tgtgaacccg atcacgccgg cgggcggcgc gggcctgaag tacctggcgg
       61 tctcgcccga ccaccagcat gtgtggtccg tggcaacgga cggcacgttg tggcggcaca
      121 accccgctgg aggctggctg caggccccgg cggcaggaaa ggtcagcttg ccgctcgagg
      181 acctcacggt cgatgagagc aacagtgtct ggatgacggg tcagatcggc accatctgga
      241 ggacgagcga cgggacctcg ttccaggacg ccaccgtcct gatcggcttc aagcgactcg
      301 ccgtcgggcg cggggactac tcgctgtggg gtatcgcagc caatggaagc ctgtggtggc
      361 actatcgtcc gacccgcacc tggtacccca cgaacggcac caacatggaa gacctctccg
      421 tcacctatga gggtgtcgtc tggctggtcg atcgaggcgg ccgggtatgg accacgagag
      481 acggccagac gcttcagccg aacccgggga cgggcttccg tcgcatctcg gccggccgct
      541 acagcatcgt gtatggcgta aagaccgacg gtacgctctg gatgtgggcc attacgccct
      601 cgactcctcc cagccagagc gggggcgggg ggggcggagg tggcgggggt ggcgggggtg
      661 ggggaggcgg gggtggcagc ggcggtcaga ccgttccagc ggcgcccagc gtcggctgct
      721 ccaccagcgg tgcggatgtc ttcatcatca gcggctcggg cttcctcgcc aactctcagg
      781 tcaccattaa aggcgcgaac atcatctatg gccaggccaa caacgtctac tggatcacga
      841 gtgccagctc gaccggtacg ataagccagt cgctgacgat accgtgcgtg cccggagtcc
      901 agatcaactt ctccgccacc gatggtcgtt ccaatccgaa cgactggacc gggaagctat
      961 ggagcaatac ggtcacctgc agctgccctg cctgaggccc tccgccagct acgggaggtg
     1021 ctcgcagggc gccgggagcg gttcggcgag cggcatccgg atgtaggcac cgcgctccga
     1081 agcctcggtc tcgtgctgca ccgaaccggg cggcccgcgg cagccgagga cacgctccgc
     1141 ctggcgcggc atctaccggg acgcgttcgg cccccatcac ccgcgggcgg ccgaagcgtt
     1201 cacgactctg gggcggtgct gctttggcga tccgacgaag cgaagctcgc ctcactcgac
     1261 taccggctgg cgaccgggcg ttcgccgcgg atcccgcccg ggccgccgtg gcgggggagt
     1321 tggggcggtg gatggcgaag gtgcgagagt gagcacagcg gccaacgtcg aggtgcggga
     1381 ggctaacggc cgcgctcctc gggcacccgc tcccaccggg tgatctcggt catccacccc
     1441 tcgttcttcc gccgctcgaa ggaggccctg aggtgcggcg tggccttgtg cagctcgagc
     1501 gcccccgcgt cccgccacac ctccaggcgc atgaaccggt ccggctgatc caccgactgg
     1561 tagaggtcgt acccgatgtt ccccgcttcc gctcgggtcg gtgcggtgag cgagagcagc
     1621 tcctgcttca cctcacgcgc cttcccctcc ctgccctgaa tgaaggtgac cgccgtcagg
     1681 acgttatcgg gcgcggcctc gcgcatcgcc tggcgcgccg cgggcgtctt gagctccacc
     1741 aggatcccat gggcgtcggt gtctccgacg ttcaccggcg agtgggtcac ggcctcgctg
     1801 aagagtactt cgccggcccg ggtctcccgc atgccggtcc ggccatcggg aaaccggaag
     1861 cggatcctga acggctccag cacgtacagc acgtgcgcgg ggtgggagtg gaagtcttcg
     1921 ctatcgcact tcctcagcct gaagtccagg acccggacct gctcgttctc gatgaggacc
     1981 tggtagttgc cgggatacac cggcaccgga tcctgggcca cggccgtcgt ggagagcacc
     2041 gcggcggcgc ccagggcgag ggggacgatc cttcgaaacg gcatcggcgg ctccggagct
     2101 tgaggtcccg gtgtaatgcg gccggccggg ccggcggttc ccgggaccac gggaacccgg
     2161 ttcgagcttc cgggcattac atcccgggta caccggcgcc ccgcacgcaa gaggagctct
     2221 cgtgaagacg cgttggacac tcggactcct ggcgctggcg gctgcgatgc ccgcccatgc
     2281 ccagctgcac ccgcggccgg ccaggccccc ggtcgtccgt tcactagacc ctcgcttcga
     2341 cgcgctggtg ccccgcgatg catcggtcga gaagctgtcg gacggacacc agt
//
LOCUS       DASUYN010000146         2014 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_708100, whole genome shotgun sequence.
ACCESSION   DASUYN010000146 DASUYN010000000
VERSION     DASUYN010000146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2014
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_708100"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1539)
                     /locus_tag="VF061_02850"
     CDS             complement(<1..1539)
                     /locus_tag="VF061_02850"
                     /inference="COORDINATES: protein motif:HMM:NF023853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase III"
                     /protein_id="HEX6668467.1"
                     /translation="MTTPARPSEAGSTPVERVDTIFGSDVFSRSVMRQRLPKEVYRSL
                     LRTIDQGEPLDPAVADVVAASMKDWAIENGASHYTHWFQPLTGLTAEKHDSLAAPDGN
                     GGVVFNFSGSELVQGEPDASSFPSGGIRATFEARGYTAWDATSPAFLMRGDNNVTLCI
                     PTAFVSWTGEALDTKIPLLRSVEALSRQALRILKIFGTDQGVSRVYTTVGPEQEYFLV
                     DRELYFLRPDLLICERTLFGARPPKGQQLEDHYFGTIPPRVLAFMAESERELYKLGVP
                     VKTRHNEVAPGQYEIAPLFEPSHISSDHQMLIMETLKRVAPRYGLQALLHEKPFAGVN
                     GSGKHNNWSMSTDTGVNLLDPRDETHTNMQFLIFLVATIRAVDLHADLLRASIASAAN
                     DHRLGANEAPPAIISVFLGKMLTDILEQVEQGLPKRTIRGGTLDLGAKTLPQLPRHSG
                     DRNRTSPFAFTGNKFEFRAVGSSASIAWPNTVLNTIVAESLDYMATELEKAAGARSNP
                     AKLQS"
     gene            complement(1626..>2014)
                     /locus_tag="VF061_02855"
     CDS             complement(1626..>2014)
                     /locus_tag="VF061_02855"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HEX6668468.1"
                     /translation="ADIRIVAVEPAESPVLSGGQPSPHRQQGIGAGFVPPILDTRIYD
                     EVIRVSNEDAIATARRLAREEAIFAGISSGSITWAALQVASRVENAGKLIVSIICDFG
                     ERYLSNPVYTELPDPDYSDLEAAITG"
BASE COUNT          301 a          627 c          745 g          341 t
ORIGIN      
        1 ggactggagc ttcgccgggt tggagcgcgc gcccgccgcc ttctccagct cggtggccat
       61 gtagtccagg gactccgcca cgatcgtgtt gagcaccgtg ttgggccagg cgatgctggc
      121 gctggagccg acggcgcgga actcgaactt gttgccggtg aacgcgaagg gcgaggtgcg
      181 gttgcggtcg cccgaatgcc gcgggagctg gggcagcgtc ttggcgccga ggtcgagtgt
      241 gccgccccgg atggtgcgct tgggcagccc ctgctccacc tgctccagga tgtcggtgag
      301 catcttgccc aggaacaccg agatgatggc cggcggcgcc tcgttggcgc cgagccggtg
      361 gtcgttcgcg gccgaggcga tggaggcacg cagcaggtcc gcgtggaggt ccaccgcccg
      421 gatggtcgcc accaggaata tcaggaactg catgttggtg tgggtctcgt cccgggggtc
      481 gaggaggttg accccggtgt cggtggacat ggaccagttg ttgtgcttgc ccgagccgtt
      541 cacgccggcg aacggcttct cgtgcagcag cgcctggagt ccgtaccggg gcgcgacccg
      601 cttcagcgtc tccatgatca gcatctggtg atcactggag atgtggctcg gctcgaagag
      661 gggcgcgatc tcgtactggc cgggcgccac ctcgttgtgc cgggtcttga ccggcacccc
      721 cagcttgtag agctcccgct cggactccgc catgaaggcg aggacccgcg gcgggatggt
      781 gccgaagtaa tggtcttcga gctgctggcc cttgggaggg cgggcgccga agagggtgcg
      841 ctcgcagatg aggagatcgg gccgcaggaa gtacagctcg cgatccacca agaagtactc
      901 ctgctcgggt cccacggtgg tgtacacccg ggagacgccc tggtcggtcc cgaagatctt
      961 caggatgcgg agggcttgcc gggagagcgc ctcgaccgag cggagcagcg ggatcttggt
     1021 gtcgagggcc tccccggtcc agctgacgaa ggcggttgga atgcagaggg tgacgttgtt
     1081 gtcgccccgc atgaggaagg ccgggctggt cgcgtcccac gccgtgtacc cgcgggcctc
     1141 gaaggtggcc cggatgccgc ccgaaggaaa gctggaggcg tcgggctcgc cctgcaccag
     1201 ctccgagccg gagaagttga agaccacgcc cccgtttccg tctggcgccg cgagcgagtc
     1261 gtgcttctcg gcggtgaggc cggtcagggg ctggaaccag tgggtgtagt ggctcgcgcc
     1321 gttctcgatg gcccagtcct tcatcgaggc cgcgaccacg tcggcgactg ccgggtccag
     1381 cggctcaccc tggtcgatgg tccggagaag gctgcggtag acctccttgg ggaggcgctg
     1441 tcgcatcacg ctgcgggaga acacgtcgct gccgaaaatg gtgtctaccc gctcgaccgg
     1501 tgtggagccg gcctcggacg ggcgtgcggg agtggtcact ggggccttcg cctcgctgat
     1561 tggggtggtc ctgggaaagg acacaactta atcgcgtgga cccggcccgg aagagttctc
     1621 cggcctcagc cggtgatggc ggcctccaga tcggagtaat ccgggtccgg cagctcggta
     1681 tagaccggat tggacaggta gcgctccccg aagtcgcaga tgatcgagac gatcagcttc
     1741 ccggcgttct ccacccggga agccacctgg agcgccgccc aggtgatgga gccgctggag
     1801 atgccggcga agatggcctc ctcccgcgcg agccgccggg ccgtggcgat ggcgtcctcg
     1861 ttgctgaccc ggatcacctc gtcgtagatc ctcgtgtcca ggatcggggg gacgaacccg
     1921 gcgccgatgc cctgttggcg gtgcggcgac ggctgacccc cggagagcac cggactctcc
     1981 gccggctcca ccgcgacgat ccggatatcc gcgt
//
LOCUS       DASUYN010000147         2328 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1151529, whole genome shotgun sequence.
ACCESSION   DASUYN010000147 DASUYN010000000
VERSION     DASUYN010000147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2328)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2328)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2328
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1151529"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..817)
                     /locus_tag="VF061_02860"
     CDS             complement(<1..817)
                     /locus_tag="VF061_02860"
                     /inference="COORDINATES: protein motif:HMM:NF012879.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HEX6668469.1"
                     /translation="MPLPSARIAPLALVLATVGPASDPAPLAAQAGQTGAGAAIDIPF
                     TRHVLPNGLTLLVHEDHKAPIVAVNLWYHVGSKNERPGRTGFAHLFEHLMFNGSENYN
                     QDYFGALQEGGATDLNGTTNEDRTNYFQNVPVNALDLVLFLESDRMGHLLGAVTQERL
                     DEQRGVVQNEKRQGENQPYGRVWEFLNPRVYPANHPYSWSVIGAMEDLGAAKLEDVQE
                     WFRSYYGAANAVLVVAGDVTPEDVKARVEKYFGDIPAGPPTARQEAWVAKRSGS"
     gene            complement(896..1393)
                     /locus_tag="VF061_02865"
     CDS             complement(896..1393)
                     /locus_tag="VF061_02865"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX6668470.1"
                     /translation="MLPDEADVLLVQDNPLEVELTLRPLRDLDPQCRLGVARDGEEAL
                     DYLLGRGAVRHRLGAAPPRLILLEFRLPRVDGVEVLRALRASPRASTVPVVMLLPASD
                     AREVAQCYQVGANSCVVKPVAFARFHQTIQAIGRYWLGTNLAATAVIAPAATADSRGA
                     SARGG"
     gene            complement(1383..>2328)
                     /locus_tag="VF061_02870"
     CDS             complement(1383..>2328)
                     /locus_tag="VF061_02870"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX6668471.1"
                     /translation="RQLCEDGLRSVLSVPLLVDGEAIGEVNLASDQPGAFDSEHRDIA
                     LEVAAPIAIAIQHSRLREDLAQKSTELERRMGERGAALRAVTAELETFLYTVSHDLRT
                     PVRHIGGFAELLLQDGGPGLDPTARHYAGRVAEGANRLGSMLDDLVQLSRLGRQDMLR
                     RPVDFNLLVDDVVGRLQADAGDRIIDWVVEPLPMLECDPTLARTAVLNLLENAVKFTR
                     TRARASIRVGPVRVEGQDGIAVQDNGVGFKMAYAGKLFGLFQRLHRSDEFEGEGAGLA
                     FVQRIAQRHGGRVWAESEVDEGATFFITFGGPDVRHAT"
BASE COUNT          334 a          816 c          829 g          349 t
ORIGIN      
        1 ggctgccgct ccgtttcgcc acccaggctt cctggcgcgc ggtcggcggg cccgcgggga
       61 tatcgccgaa gtacttctcg acccgggcct tcacgtcctc gggggtcacg tcgccggcca
      121 ccaccagcac cgcgttcgcg gcgccgtagt agctccggaa ccactcctgc acgtcctcta
      181 gcttggcggc gccgagatcc tccatggcgc cgatcacgct ccaggaatag ggatggttcg
      241 ccgggtagac ccgcgggttc agaaattccc acacccggcc gtagggctgg ttctcgcctt
      301 ggcgcttctc gttctgcacc acgccacgct gctcgtccag ccgctcctga gtcaccgcgc
      361 cgagcagatg gcccatacgg tcggactcga ggaagagcac cagatcgagc gcgttgaccg
      421 gcacgttctg gaagtagttg gtgcgatcct cgttggtcgt cccgttgagg tccgtcgcgc
      481 ccccctcctg cagcgccccg aagtagtcct ggttgtagtt ctcgctgccg ttgaacatca
      541 ggtgctcgaa caggtgggcg aagccggtcc gccccgggcg ttcgttcttg gaccccacgt
      601 ggtaccacag gttcaccgcc acgatcgggg ccttgtggtc ctcgtgcacg aggagcgtga
      661 gcccgttggg gaggacgtgg cgggtgaacg ggatgtcgat cgccgctccg gcgccggtct
      721 gtcccgcctg ggcggcgagt ggggccggat cgctcgcggg cccgacggtc gcgagcacga
      781 gggcgagggg ggcgatgcgt gctgacggga gaggcactgg agacgttcct gtggtagtgg
      841 agccgggaat gcggtcgcga tcggaagcta ggacgggcgg gagaagccgg aagtgtcatc
      901 ccccccgggc cgatgcccca cgactgtccg cggtcgcggc cggggcgatg accgccgtcg
      961 cggccaggtt ggtgccgagc cagtagcgcc cgatggcctg gatcgtctgg tggaagcggg
     1021 cgaacgccac cggcttcacc acgcagctgt tggccccgac ctgatagcac tgggccacct
     1081 cgcgcgcgtc gctcgccggg aggagcatca ctaccggcac cgtgctggcc cgcgggctgg
     1141 cgcggagtgc ccgcaggacc tcgaccccat ccacccgggg aagccggaac tcgaggagga
     1201 tgagccgcgg gggggcggcg ccgaggcggt gtcggacggc gccgcggccg agcaggtagt
     1261 cgagtgcctc ctcgccatcc cgggcgacgc cgagccgaca ctgcggatcc aggtcgcgga
     1321 gcgggcgcag ggtcagctcg acctcgagcg gattgtcctg caccaggagg acatcggcct
     1381 cgtcaggtag catgccggac gtcggggccg ccgaacgtga tgaagaaggt cgcgccctcg
     1441 tccacctccg actcggccca gacccggccg ccatggcgct gcgcgatccg ctggacgaag
     1501 gcgagcccgg caccctcccc ctcgaactcg tccgagcgat gcagtcgctg gaacaggccg
     1561 aagagcttac cggcgtacgc catcttgaag cccaccccgt tgtcctgcac ggcgatgccg
     1621 tcctgtccct cgacccgcac cggcccgacg cggatgctcg cccgggcgcg agtgcgggtg
     1681 aacttcacgg cgttctccag gaggttcagg accgcggtcc gggccagggt tggatcgcac
     1741 tcgagcatcg gcagcggctc caccacccag tcgatgatcc ggtcaccggc gtcggcctgc
     1801 agccgcccca ccacatcatc caccagcagg ttgaagtcca ccggccggcg gagcatgtcc
     1861 tggcggccga gacgactgag ctgcaccagg tcgtccagca tgctgccgag ccggttggcg
     1921 ccttcggcga cgcggccggc gtagtggcgc gcggtcgggt cgagccccgg gccgccgtcc
     1981 tgcagcagga gctcggcgaa gccgccgatg tgccgcaccg gggtgcggag gtcgtgcgag
     2041 acggtgtaga ggaaggtctc cagctccgcc gtcacggcgc ggagggcggc gccgcgctcg
     2101 cccatccgcc gctccagctc ggtgctcttc tgggccaggt cctcgcgcag gcgggagtgc
     2161 tgaatcgcga tcgcgatggg cgcggccacc tccagggcga tgtcgcggtg ctcggagtcg
     2221 aaggcgccgg gctggtccga cgcgaggttc acctcaccga tcgcctcgcc atccaccagc
     2281 agcggcacgc tcagcacgct ccggagcccg tcctcacaga gctgccgg
//
LOCUS       DASUYN010000148         2150 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_932337, whole genome shotgun sequence.
ACCESSION   DASUYN010000148 DASUYN010000000
VERSION     DASUYN010000148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2150)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2150)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2150
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_932337"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(45..995)
                     /locus_tag="VF061_02875"
     CDS             complement(45..995)
                     /locus_tag="VF061_02875"
                     /inference="COORDINATES: protein motif:HMM:NF033577.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS481 family transposase"
                     /protein_id="HEX6668472.1"
                     /translation="MSDAIGPPRRKRLSWECRCEIVAKVRAGGMSAEQAAISSGVHRS
                     TVYRLLARHETAGWAGLRERRPVPRRQPRHSPAELERRILAARAASRYGPRRLGAILG
                     VPASTVHKVLARHGASRIPRPGRPEVIRYERERPGELLHLDTKRLGRFHQVGKAILRD
                     GIQRSPRAGWHHLHVAVDDMSRIAYCEVLSGQGAEAACAFLGRAVAWFAAHDIQIERV
                     LTDNGHAYRSHAFAELCERLCIERRRTRPYTPRTNGKAEAFIGTCLREWAYRYPYPTS
                     TQRTRALPGWVRWYNRRRPHSSLGNRPPISRVAQVRGQIT"
     gene            complement(1091..1693)
                     /locus_tag="VF061_02880"
     CDS             complement(1091..1693)
                     /locus_tag="VF061_02880"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX6668473.1"
                     /translation="MSHEKPRRRYELRKRAEQVAETHRRITDAAIELHGTVGPARTTL
                     SAVAERAGVERRTLYRHFPDEAELFAACSTAYFEANPWPDLDAWRAIRDPRERLAHAL
                     EELYAYYERTAPMFANVLRDAELVGFARDAVAPLEAHLRDAAEVLAAGRGLRGRRRLL
                     LVAALRHALAFPTWRSLTESGVGRADAVALVTALVEAAAA"
     gene            1792..>2150
                     /locus_tag="VF061_02885"
     CDS             1792..>2150
                     /locus_tag="VF061_02885"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX6668474.1"
                     /translation="MSTAQRVASTATPEGVLASIVHGINHGDLDALMDLYEPGAAFAA
                     EPGTMVPGPAGIREALGGFVALDGELDLHVTRVLEADDLALVVGTWTFDGTAPDGAPV
                     HLEAANADVLRRQADGT"
BASE COUNT          281 a          773 c          804 g          292 t
ORIGIN      
        1 gcggcggccg cccgcgcgcg ggggccgcgc gcctactcgc tccgctaggt gatctgacca
       61 cggacctgcg cgacacggct gataggtggc cggttgccga gggagctgtg gggtcggcgt
      121 cggttgtacc agcgcaccca gcccgggagg gctcgggtgc gctgggtgct ggtgggatag
      181 gggtagcgat aggcccattc cctcaggcag gtgccgatga aggcctctgc cttgccgttg
      241 gtgcgcggcg tgtagggccg cgtgcgccgg cgctcgatgc aaaggcgctc gcacagctcg
      301 gcgaaggcgt gcgagcggta ggcgtggccg ttgtcggtga gcacccgctc gatctggatg
      361 tcgtgggcgg cgaaccaggc caccgcacgg ccaaggaagg cgcaggcggc ctctgcgccc
      421 tggccggaca ggacctcgca gtaggcgatc cggctcatgt catcgaccgc cacgtgcagg
      481 tggtgccagc ccgcccgggg gctgcgctgg atgccgtcgc gaaggatcgc cttgccgacc
      541 tggtggaagc gccccaggcg cttggtgtcc aggtgcagca gctccccggg ccgctcgcgc
      601 tcgtagcgga tcacctcggg gcggcccggc cgggggatgc gcgaggcgcc gtggcgggcc
      661 agcaccttgt ggaccgtcga ggccggcacg ccgaggatcg cccccaggcg ccggggcccg
      721 tagcggctgg ccgcccgcgc ggcgaggatc cgtcgctcga gctcggccgg gctgtggcgg
      781 ggctggcggc ggggcacggg ccggcgctcg cgtaggcccg cccagcccgc cgtctcatgg
      841 cgggccagca gccggtagac cgtcgagcgg tgcacgcccg agctgatcgc ggcctgctcg
      901 gcgctcatgc ccccggcacg caccttggcg acgatctcgc agcgacactc ccagctcagg
      961 cgcttgcgtc ggggtggccc gatagcgtca gacatccggg tctccttgga ggtagggcgg
     1021 tagcacccca accctcccgg gagacccgga cggaacgatc agatgtcgcg caggtgtgtg
     1081 gtcactgcag ctaggcggcc gccgcctcca ccagcgcggt cacgagcgcg accgcgtccg
     1141 cccgcccgac cccggactcc gtgagcgatc gccatgtggg gaacgccagc gcgtggcgca
     1201 gcgcggcgac gagcagcagc cggcggcggc cacggagccc gcgacccgcg gcgaggacct
     1261 ccgcggcgtc gcggagatgc gcctccagcg gtgcgacggc gtcgcgcgcg aaccccacca
     1321 gctcggcgtc gcggaggacg ttcgcgaaca tcggcgccgt gcgctcgtag tacgcgtaca
     1381 gctcctccag ggcatgggcg agccgctcgc gcgggtcgcg gatcgcgcgc cacgcgtcca
     1441 ggtccggcca cgggttggcc tcgaagtacg ccgtcgagca ggccgcgaac agctcggcct
     1501 cgtccgggaa gtgccggtac agcgtccggc gctcaacgcc cgcgcgctcg gcgaccgcgc
     1561 tcagcgtcgt gcgcgccggc ccgaccgtcc cgtgcagctc gatggccgca tcggtgatcc
     1621 gccggtgcgt ctcggccacc tgctccgcgc gcttccggag ctcgtacctc cgcctgggct
     1681 tttcgtgact catttctgtg tcgcggatat tgacagaccg gaacggcggt gcatagtgtc
     1741 gtcgcattcg aagacacaag tatgtgtcac caaattggag aggagcggat catgtccact
     1801 gcacagcgcg tcgcctccac cgcgaccccc gagggcgtcc tggcgtccat cgtgcacggc
     1861 atcaaccacg gcgacctcga cgccctgatg gacctctacg agcccggcgc ggcgttcgcc
     1921 gcggagccgg gcaccatggt ccccggcccg gcgggcatcc gcgaggccct ggggggcttc
     1981 gtcgcgctgg acggcgagct cgacctccac gtgacccggg tcctcgaggc ggacgacctg
     2041 gccctcgtgg tcggcacctg gacgttcgac ggcacggcgc cggacggcgc gccggtgcac
     2101 ctcgaggcgg cgaacgccga cgtcctgcgc cgccaggcgg acggcacctg
//
LOCUS       DASUYN010000149         3381 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_270546, whole genome shotgun sequence.
ACCESSION   DASUYN010000149 DASUYN010000000
VERSION     DASUYN010000149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3381)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3381)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3381
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_270546"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1119
                     /locus_tag="VF061_02890"
     CDS             <1..1119
                     /locus_tag="VF061_02890"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HEX6668475.1"
                     /translation="GGELRFGVRLERRGADLGGELCNGHQCQPFSAVALRGDSLVLEL
                     ADYAATITARLAGDSLAGAYRNVGNRGPRVIPFRAARGTWPAEAGPGRLLGRWDATWI
                     GDFGTSPRVIELRNGPGGLEGTIISNTGDYGHFAGSATGDSFAIAHFDGSYVYLLTGA
                     LGGGRGRPDTLRGVFHAGLRTQTPWIAVRSTGKPHLRAVTENTQADTTQPFRFAFPDL
                     DGRLVTERDPRFEGKVVVVDVFGTWCPTCHDAAPELVRLYRKYRGRGLEIVGLAYEVS
                     GDTAVDRRQVRRYREKFGIPFTLLLAGVNDTDAAAATLPQLQGFTSFPTTIFLGRDGR
                     VRRIHAGFYGPATGAQHARQVRAWQGEVERLLAERPRG"
     gene            2177..3340
                     /locus_tag="VF061_02895"
     CDS             2177..3340
                     /locus_tag="VF061_02895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668476.1"
                     /translation="MSVSEAQLTMQMSNGWTFTFAGNVNAFAIYETQGEDGATVAPGG
                     LVGVGGKGFNIRTGLLPAFAVFDAKGKEGETDLGVHFGFAPQIQCGGQAHDCFGAQID
                     MRQVFLTVGGTWGQILAGRELGLFNRQNILTDQTLFGIGATGGINGGGTTLGRIGFGY
                     IYPNFVAQMTYSTPAGRPTQLSIGLFQPSSLAGDGGAVYDETQIPRLEAEGVWSSGQT
                     KVWVNGTLQNAKSLLTDESKTATGVGGGVRFGSSTFSLTGSGYWGKGIGTTLQFNGVN
                     AAGTDVPVNGLGVGDDGELRDSYGFIGQITFTPANSKVTVAGSYGSSYLKATDGEADF
                     KTENTLISGGIYYQATKSLKVVGEGNYAWTKESVVDAEKNSTFAPTVGLMLFF"
BASE COUNT          530 a         1128 c         1201 g          522 t
ORIGIN      
        1 ggcggcgagc tccgcttcgg cgtgcggctg gagcgacgag gtgccgacct gggcggggag
       61 ctctgcaacg ggcaccagtg ccagcccttc tcggccgtcg cgctgcgagg tgacagcctc
      121 gtcctggagc tggcggacta cgcggccacg atcacggcgc gcctggcggg ggattcgctc
      181 gccggtgcct accgcaacgt gggcaaccgg ggcccgcgcg tgatcccgtt ccgggccgcg
      241 cgcgggacct ggcccgcgga ggccgggccc gggcgcctgc tggggcgatg ggatgcgacg
      301 tggatcggcg acttcggtac cagcccgcgc gtcatcgagt tgcggaacgg gcccggcggg
      361 ctcgagggca ccatcatctc caacacgggc gactacggcc acttcgcggg gtccgccacg
      421 ggcgacagct tcgcgatcgc gcacttcgac ggttcgtacg tctacctgct gaccggggcg
      481 ttgggcggtg gccgcggcag gcccgatacc ctgcgcgggg tctttcacgc ggggctccgg
      541 acccagacgc cgtggatcgc ggtccgaagc accggcaagc cccatctcag ggcggtcacc
      601 gagaatactc aggcggatac cacgcagccg ttccgcttcg cctttcccga cctggacggc
      661 cggctggtca cggagcggga tccgcggttc gagggcaagg tggtcgtggt ggacgtcttc
      721 gggacctggt gccccacatg ccacgacgcg gcacccgagt tggtccggct gtaccggaag
      781 taccgcgggc ggggactcga gatcgtggga ctggcgtacg aagtctccgg cgacaccgcg
      841 gtggaccggc ggcaggtgcg tcgctaccgg gagaagttcg gaatcccgtt caccctgctc
      901 ctcgcgggcg tcaacgacac cgacgccgcc gctgcgactc tcccccagct ccagggcttt
      961 acgtccttcc cgaccaccat cttcctgggt cgcgacggca gggtgcggcg aatccacgcg
     1021 gggttctacg ggcccgctac gggggcgcag cacgccaggc aggttcgggc ctggcagggc
     1081 gaagtggagc ggttgctggc ggagcggccg cgcggctgat cattgcataa aatcaccaca
     1141 ttccgaatat tgtttcatcc ggaaacctga tcagcgccgc gcgccgcctc cggtggccgg
     1201 ccaagcccgg gcggtccggc ccgcccccgg cgatgcgccg gccctggtgc caccagcgca
     1261 aacttttgca gtatatgggg ttgggctaat tcggtcgggg cgggcgagcc aactgtcgga
     1321 ttttcgggga cttgacgccc ggacaccggg aaacaaattg taagccgttc atccacttac
     1381 cccttcgctg aatcatccgg cgccgcactt ggagacgccg atctggcggc ctttcaggcc
     1441 gggccagcga catcgttcat gtacaccgcc cgagcggcgc gccgagccgg ccgggccgtt
     1501 cggcgggccc cgcagccggc agcggtgaac cttgagaccc gagggagagt gcgagtggcg
     1561 acgagccctg gtccttcgag ctcagcccgc cgtgcaggac ggtctcaccg ccgtcgcgac
     1621 gccatcgcgc cgcggcggcg tgtcacgtag gagagcagtc cgctccatcg ccttcggcgt
     1681 ggcgaaggca gccgggtagg gcgttgcacg ttccgcagga tgactcgctg gtgaggggag
     1741 gccccggggc cgcgggccga tggggcacga aggacggacc gcattcgtgg agggattcct
     1801 ggccggagcg gcattggcca ggcggcggag tgagcccgct cccagcgggc cctccgagcg
     1861 cagcgacagg gctgcgaatg gaccggccgc tcggccggtc tcaccgggcg atcgggaagc
     1921 gccgccgtac cggcggagtc ggcttccctt acggcgctta cgtccacgcg aaccggatca
     1981 gcgacccggc ccgcgttcga ggaggtgaac tcgatactga cgcgcccgaa ttgaagtccg
     2041 cgcccgagcg cggccgagtg gcaggtgcag gaattcgtcc cggaggttga ctgtcgttgg
     2101 cggtcatttc ttcactgagg gagacgcacc tatgaagcga gtcgcactgt tgtgcatggg
     2161 cctggtgcta ggcgcggtgt ccgtgtccga agcccagctc acgatgcaga tgagcaacgg
     2221 ctggaccttt acctttgccg ggaacgtgaa cgcgttcgcg atctatgaaa cgcagggcga
     2281 ggacggcgcg accgtagctc cgggggggct ggtcggcgtc ggcgggaagg gcttcaacat
     2341 ccgcacgggt ctgctcccgg cgttcgcggt gttcgacgcc aagggcaagg aaggcgagac
     2401 ggacctgggc gtgcacttcg ggttcgcgcc tcagatccag tgcggcgggc aggcgcacga
     2461 ctgcttcggc gcgcagatcg acatgcgtca ggtgttcctg acggtcggcg gcacctgggg
     2521 ccagattctc gccggtcgcg agctcggtct gttcaaccgg cagaacatcc tgaccgacca
     2581 gaccctcttc ggcatcggcg ccaccggcgg gatcaacggg ggcggcacga ccctcggccg
     2641 catcggcttc gggtacatct atccgaattt cgtggcccag atgacctact ccaccccggc
     2701 cggccggccg acccagctct ccatcggcct cttccagccg tcctcgctcg cgggtgatgg
     2761 cggcgcggtg tacgacgaga cccagatccc ccgcctcgaa gccgagggcg tgtggagcag
     2821 cggccagacc aaggtgtggg tgaacggcac gctccagaac gccaagtcgt tgctgacgga
     2881 cgagtccaag acggcgaccg gcgtgggcgg cggcgtgcgg ttcggcagct cgaccttctc
     2941 cctcaccggt tcgggctact ggggcaaggg catcggcacg acgctccagt tcaacggcgt
     3001 gaacgccgcc ggcacggacg tgccggtaaa cggccttggc gtgggcgacg acggcgagct
     3061 gcgcgactcc tacggcttca tcggccagat caccttcacc ccggcgaaca gcaaggtcac
     3121 cgtggccggc agctacggct cgagctacct caaggcgacc gatggcgagg cggacttcaa
     3181 gaccgagaac accctgatct cgggcggcat ctactaccag gccaccaagt cactcaaggt
     3241 ggtcggcgag ggcaactacg cctggaccaa ggagtcggtc gtggacgccg agaagaactc
     3301 caccttcgca ccgaccgtgg gcctgatgct cttcttctga tctcgacgag cgtctgcggt
     3361 gacttcggcg gccccgaaag g
//
LOCUS       DASUYN010000150         2279 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_270792, whole genome shotgun sequence.
ACCESSION   DASUYN010000150 DASUYN010000000
VERSION     DASUYN010000150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2279
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_270792"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..888)
                     /locus_tag="VF061_02900"
     CDS             complement(<1..888)
                     /locus_tag="VF061_02900"
                     /EC_number="5.1.99.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate epimerase"
                     /protein_id="HEX6668477.1"
                     /translation="MLPVLTPDQSAAWDRKAVAAGIELATLMECAGRAVVAALAARFA
                     TRLAQGVLVAAGPGHNGGDGWVVARALHRLGVPLWVTAPPGAGAPLRERMALLARTEG
                     VREVAPDGPWPTVGLAVDALLGTGASGPPRPPMAALLERLLDLEVPVIAVDGPTGVDL
                     LSGTVHGTPRADLTVTFGGVRRGHLLARDEVGDVLVVDIGHPPAEQGWPALVTDRDAA
                     EWLPRLRAADHKGTRGRVVVVGGDAGMTGAVRMAARAAFAAGAGLVHAISPAETVAAL
                     VQAEPDLQTLAHPFDGEPSS"
     gene            complement(983..1177)
                     /locus_tag="VF061_02905"
     CDS             complement(983..1177)
                     /locus_tag="VF061_02905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668478.1"
                     /translation="MERTEWPSCQKCSHGTLIPLSDYGREGAPITYKAWVCTNPECGF
                     NLRIDNGEISFGRAIGQSYK"
     gene            complement(1209..1595)
                     /locus_tag="VF061_02910"
     CDS             complement(1209..1595)
                     /locus_tag="VF061_02910"
                     /inference="COORDINATES: protein motif:HMM:TIGR04138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Minf_1886 family protein"
                     /protein_id="HEX6668479.1"
                     /translation="MNELQFADDVMARIRARGGAYHERAYLFVLATIEYLQTRLEVRR
                     HVSGPELAWACRDFAREQFGLLAPHVLRHWGVRRTEDIGRLVFTLVEVGLLVTQPGDH
                     ESDFEAVYQFDDAFGDVYQWQGVRGT"
     gene            complement(1628..>2279)
                     /locus_tag="VF061_02915"
     CDS             complement(1628..>2279)
                     /locus_tag="VF061_02915"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682784.1"
                     /note="catalyzes the reaction of glycine with
                     5,10-methylenetetrahydrofolate to form L-serine and
                     tetrahydrofolate; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HEX6668480.1"
                     /translation="GGVYPSPVPHAPVVTSTTHKTLRGPRAGLILSTAEYAKAIDKSV
                     FPGTQGGPLEHVIAAKAVAFGEALTDDFKAYSRRVVENARTLADALIDRGFAIVSGGT
                     DTHLMLVDLRPKELTGKAAEKTLDQAGITVNKNTIPDDPQSPFVTSGIRLGTPALTTR
                     GMGPGEMERVAELIDRALTRPDEANLARVREEVEELSSTFPLYQPKSAAGRVRRSA"
BASE COUNT          318 a          822 c          816 g          323 t
ORIGIN      
        1 ggaggagggc tcgccgtcga acgggtgcgc cagcgtctgc aggtccggct cggcctgcac
       61 cagtgcggca acggtctcgg ccggcgagat cgcatgcacc agccccgcgc ccgcggcgaa
      121 cgccgcgcgc gcggccatgc ggaccgcgcc ggtcatgccg gcgtcgccgc ccaccaccac
      181 gacccggccg cgggtgccct tgtggtcggc ggcgcgcagg cggggaagcc actccgcggc
      241 gtcccggtcg gtgaccaggg ccggccagcc ctgctcggcg gggggatggc cgatgtccac
      301 caccagtacg tcgcccacct cgtcgcgggc gagcaggtgt ccccggcgaa ctccgccgaa
      361 ggtgaccgtc aggtcggctc gcggcgtccc gtgcacggtg ccgctcagca ggtccacccc
      421 ggtgggtccg tccaccgcga tcaccgggac ctcgagatcg aggagtcgct ccaggagcgc
      481 cgccatcggc gggcgaggcg gcccgctcgc gcccgtgccc agcagggcgt ccaccgcgag
      541 gccgacggtg ggccagggac cgtccggcgc cacttcgcgg acgccctcgg tccgggccag
      601 cagggccatc cgctcgcgga ggggcgcgcc ggcgccgggt ggcgccgtga cccagagcgg
      661 cactcccagc cggtggagcg cccgggccac gacccagccg tcaccgccgt tgtggcccgg
      721 ccccgccgcg acgagcacgc cctgggccag gcgtgtggcg aagcgtgcgg ccagcgcggc
      781 gacgacggcg cggccggcgc actccatgag cgtcgccagc tcgatgcccg cggcgacggc
      841 cttgcgatcc caggcggcgg attgatccgg ggtgaggacg ggaagcacgg gctgcttgtc
      901 accctgagcg gagcgaaggg ggcatgatcc tgatcatgtc tccttcgctt cgctcaggat
      961 gacagaggag aagaacagca ggctacttgt agctctggcc gatcgcccga ccgaaggaga
     1021 tctccccgtt gtcgatgcgg agattgaacc cgcactcggg gttggtgcag acccaggcct
     1081 tgtaggtgat cggggcccct tcgcggccgt agtccgaaag ggggatcagg gttccatgcg
     1141 agcacttctg gcacgacggc cactcggttc tctccatgct cccctccgcg cggtcgaccc
     1201 acctccactc aggtgcctcg gacgccctgc cattggtaga cgtcgccgaa ggcatcgtcg
     1261 aactggtaca cggcctcgaa gtcggattcg tggtcgccgg gctgggtgac gagcagcccg
     1321 acctcgacca gggtgaacac gagccgcccg atgtcctcgg tccggcgcac cccccagtgc
     1381 cgcagcacgt gcggggcgag aagcccgaac tgttcccggg cgaaatcgcg gcaggcccag
     1441 gccagctcgg gcccgctcac gtgccgccgg acctcgaggc gcgtctggag atactcgatg
     1501 gtcgccagca cgaagagata ggcccgctca tgatacgcgc cgccccgcgc ccggatgcgc
     1561 gccatcacgt cgtcggcgaa ctgcagctcg ttcaccggat acgctcggag gggagggccg
     1621 ccagcattca ggcgctccgg cggacgcgac ccgcggccga tttcggttga tagagcggaa
     1681 aggtcgagct gagctcttcg acctcctccc ggacccgggc caggttggcc tcatccggac
     1741 gggtcagcgc ccggtcgatc agctcggcca cgcgctccat ctcacccggt cccatgccgc
     1801 gagtcgtgag cgccggcgtg ccgaggcgga tcccgctggt cacgaagggt gactgggggt
     1861 cgtccggaat cgtgttcttg ttgacggtga tgccggcctg gtcgagggtc ttctccgccg
     1921 ccttcccggt cagctccttc ggccggaggt ccaccagcat caggtgggtg tcggtgcccc
     1981 cggagacgat ggcgaagccg cggtcgatca gcgcgtccgc cagggtcctg gcgttctcca
     2041 ccacccggcg actgtaggcc ttgaagtcgt cggtcagcgc ttcgccgaac gcgaccgcct
     2101 tggccgcgat cacgtgctcc agcggcccgc cctgcgtgcc ggggaacacc gacttgtcga
     2161 tcgccttggc gtactccgcc gtgctgagga tgaggccggc gcgcgggccg cgcagcgtct
     2221 tgtgagtcgt gctcgtcacc accggcgcgt ggggcacggg cgagggatac acgccgccc
//
LOCUS       DASUYN010000151         2171 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_932695, whole genome shotgun sequence.
ACCESSION   DASUYN010000151 DASUYN010000000
VERSION     DASUYN010000151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2171)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2171)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2171
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_932695"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..657
                     /locus_tag="VF061_02920"
     CDS             <1..657
                     /locus_tag="VF061_02920"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HEX6668481.1"
                     /translation="LAACNSSDGDIGPGGPPLEVVKAPSKSGDAQEGLVNEALTSPIR
                     VYVTRDGVPEENVEVEWLAGDQGAINPPSSSTDVDGIAESNWTLGPATGEQNASATVD
                     DADGSPVRFVAEAVEPGTPLGATVQVLSEGGNRFEPANVTITVGQSVTWVWPEGSVGH
                     NVVPDEDTPASSGGLTNGPVSYAFTFPAVGVYRYHCGAHGGKNGIGMSGIVTVVAEQP
                     "
     gene            complement(661..1818)
                     /locus_tag="VF061_02925"
     CDS             complement(661..1818)
                     /locus_tag="VF061_02925"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEX6668482.1"
                     /translation="MSVRRLSGIPGFAIDEVAARAGSDPEVLRMENLDTDLPPPAEAL
                     AATRHALGRDDANSYLPFTGRLDLCAAVADRLERTAGRRYDPRREIVITAGATEGMLD
                     ALLATTDPGDEVILTDPTYAGMTNRVRLAGAVPRLVPFGWEGGRWRLDLDALRAAAGP
                     RTRAVFLMNPSMPSGAVLDPDTWAAVAALCAARDCWLLYNAAMERILFDGRAPFHPAA
                     IPELRERTIVIGSVSKEYRMIGWRVGWVAAPAAVLADIARVHLYNVVTPPGIAQAGAA
                     AALRLPLETLHASVAEWERRRDTVVKELAGMPVRTAAGGWSLLLDVGALGLDSFAASR
                     RLLDLGRVAATPMRDWGEANGDRFVRLVFSNEPVERLAGLGVRVRRALAAG"
     gene            complement(1815..>2171)
                     /locus_tag="VF061_02930"
     CDS             complement(1815..>2171)
                     /locus_tag="VF061_02930"
                     /inference="COORDINATES: protein motif:HMM:NF028211.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase C-terminal
                     domain-containing protein"
                     /protein_id="HEX6668483.1"
                     /translation="RERGLEIGVVPESVEHLLRHYGTEAAGIFNLGGGDRRLLRRLLP
                     PHPAIEAEVLHAVRRELAQTVEDVMVRRLHLYYEHPDRGIPAARRVAELMAREFAWDE
                     ARVETEARRYEEFARR"
BASE COUNT          317 a          812 c          783 g          259 t
ORIGIN      
        1 ctcgcggcct gcaattcgag cgacggagac atcggcccgg ggggaccgcc gctggaggtg
       61 gtcaaggccc cgtccaagag cggcgatgcc caggaagggc tggtgaacga agcgctcacc
      121 agcccgatcc gggtctacgt cacccgggac ggcgtgcccg aagagaacgt ggaagtggag
      181 tggctcgccg gcgaccaggg ggccatcaat cccccgtcga gctccaccga cgtcgacggc
      241 atcgcggaga gcaactggac gctggggccg gcaacggggg aacagaacgc gagcgccacc
      301 gtggacgacg ccgacggctc accggtccgg ttcgtggcgg aagcggtcga gccggggacg
      361 ccgctcggag cgaccgtgca ggtgctgagc gaggggggca atcgcttcga gccggccaac
      421 gtgaccatca cggtgggaca gtcggtcacc tgggtctggc cggaggggag cgtcggccac
      481 aacgtggtgc ccgacgagga cacccccgcc tcgagcggcg gcctcaccaa tggtccggtg
      541 agctacgcgt tcaccttccc cgccgtcggg gtctaccggt accactgcgg ggcgcatggc
      601 ggcaagaacg ggatcggcat gtccggcatc gtgacggtgg tggccgagca gccctgagcg
      661 tcagccggcg gcgagtgccc gccggacccg cacccccagg cccgccagcc gctcgaccgg
      721 ttcgttgctg aagaccaggc ggacgaaccg gtcgccgttg gcctcgcccc agtcccgcat
      781 cggcgtggcc gccacccggc cgaggtcgag cagccggcgc gaggcggcaa aggagtcgag
      841 ccccagggcg ccgacgtcca gcagcagcga ccacccgccc gccgcggtcc gcaccggcat
      901 ccccgccagc tccttcacca cggtgtcccg ccgccgctcc cactcggcca cggaggcgtg
      961 cagcgtctcg agtggcaggc gaagcgccgc cgccgccccc gcctgcgcga ttcccggcgg
     1021 agtcacgaca ttgtacaggt gcacccgggc gatgtcggcg agcaccgccg cgggggccgc
     1081 cacccacccc acccgccacc cgatcatccg gtactccttc gacaccgacc cgatcacgat
     1141 ggtgcgctcg cgcagctccg ggatggccgc cgggtggaac ggggcccggc cgtcgaagag
     1201 gatccgctcc atcgccgcgt tgtagagcag ccagcagtct cgcgcggcgc acagcgccgc
     1261 caccgccgcc caggtgtcgg gatcgagcac cgcgcccgac ggcatggacg gattcatcag
     1321 gaataccgcg cgggtgcgcg gccccgccgc ggcccggagc gcgtcgagat cgagccgcca
     1381 ccggcccccc tcccagccga agggcaccag ccgcggcacc gcgccggcca gccgcacccg
     1441 attggtcatt ccggcgtagg tgggatcggt gaggatgacc tcgtcgcccg gatcggtcgt
     1501 ggcgagcagc gcgtcgagca tcccttcggt ggcgccggcg gtgatgacga tctcgcgccg
     1561 gggatcgtac cggcggccgg cggtgcgctc cagccggtcg gccaccgcgg cgcagaggtc
     1621 gagccggccg gtgaacggca ggtagctgtt ggcgtcgtcc cggcccagcg catggcgggt
     1681 ggcggcgagc gcctcggcgg gcggcgggag gtcggtgtcg aggttctcca tccggagcac
     1741 ctcgggatcg ctgccggccc gcgcggccac ctcgtcgatg gcgaatccgg ggatccccga
     1801 cagccggcgc acgctcaccg gcgggcgaac tcctcgtaac gccgggcctc cgtctcgacg
     1861 cgggcctcgt cccaggcgaa ctcccgtgcc atcagctccg ccacccggcg cgccgcaggg
     1921 atcccgcgat cgggatgctc gtagtagagg tgcaggcggc gcaccatcac gtcctccacc
     1981 gtctgcgcca gctcccggcg gaccgcgtgc agcacctcgg cctcgatcgc cgggtggggc
     2041 gggagcagcc ggcggagcag ccgccggtcg ccgccgccca ggttgaagat tcccgccgcc
     2101 tcggtgccgt agtggcggag cagatgctcc acgctctccg gcaccactcc gatctcgagt
     2161 cctcgctccc g
//
LOCUS       DASUYN010000152         2510 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_271272, whole genome shotgun sequence.
ACCESSION   DASUYN010000152 DASUYN010000000
VERSION     DASUYN010000152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2510)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2510)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2510
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_271272"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..676)
                     /locus_tag="VF061_02935"
     CDS             complement(<1..676)
                     /locus_tag="VF061_02935"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEX6668484.1"
                     /translation="MSDVVFGRLRALLGTAGVDRDSVGLPRATPDSPDALSLVCRLAH
                     DEGWKIRVEGNGTWLPTDAPADLAVSARALDRVLSVSPADLVATVQAGTPMETLRRRL
                     ADEGMWLALDPPGRPERSLGSVVATGTAGPLRHGFGPIRDHILGCTVATGDGRLVRAG
                     GRVVKNVAGYDLTKLQVGGFGGFGIIAEVHLRLRALPRADVTAVARGPRDTLTSIARD
                     LVTAQLL"
     gene            complement(673..2091)
                     /locus_tag="VF061_02940"
     CDS             complement(673..2091)
                     /locus_tag="VF061_02940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HEX6668485.1"
                     /translation="MTPAMIEALGRIVGPRWVRHRRAELATYTMDGLPTRESYPGVVV
                     MPGSTAEVRDLIRLLHLTGTPFVARGAGTGLSGGAVANPDAVLVALTRMNRILKVDPV
                     RRRATLQPGVVNARLSEAALPYGLQYVPDPSSQAACTVGGNVAENAGGPHCLKYGVTT
                     NHVVELEVVLPDASLVRLGSSQGEPWGPDLVGLFVGSEGMFGIATRIVVRLEPIPSSV
                     RTMLADFPTVRAASEAVSAIIGTGIVPAALEMMDRACVAAVEASIYAAGYPTDAAAVL
                     LVELDGGADAVEAESGTVVEILRQRGAREVRSASTPADRARLWQGRKKAFGAMGRIAP
                     DLAVQDAVVPRSALPDIMDRIEEIRRRHRLAISNVFHAGDGNLHPNISFDRRDADLAA
                     RVQVACREIMAACVDAGGSITGEHGVGSDKLDYMPLIFDPDTLAAMRAVRLAFDPAER
                     ANPGKVVPVHACREWRATRAAR"
     gene            complement(2088..>2510)
                     /locus_tag="VF061_02945"
     CDS             complement(2088..>2510)
                     /locus_tag="VF061_02945"
                     /inference="COORDINATES: protein motif:HMM:NF014269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HEX6668486.1"
                     /translation="GGERFVLKQPVPDDAPYYVATVQTFEDEPGTEPADDSPAKLREV
                     FAGYYALLRQLNDVEPEESSLPDDAVGLSFHVAAALDCDPGVKQRLLVERSTARRVQG
                     LLMLVPILTAGVESALRVHRRAHTNGRGGARPDVITEP"
BASE COUNT          331 a          923 c          939 g          317 t
ORIGIN      
        1 ggaggagctg cgcggtcacc aagtcccggg cgatggacgt cagggtgtca cgcggtccgc
       61 gggccaccgc ggtgacgtcg gcccggggca gcgcccggag cctgaggtgg acctcggcga
      121 tgatgccgaa cccgccgaac ccgcccacct ggagcttggt caggtcgtag cccgccacgt
      181 tcttcaccac ccggccgccg gcgcgcacca gccgcccgtc gccggtggcg acggtgcagc
      241 cgaggatgtg gtcgcggatg gggccgaagc cgtggcgcag cggtcccgcc gtcccggtcg
      301 ccaccaccga gccgaggctc cgctccggcc gtcccggggg gtcgagcgcg agccacatcc
      361 cctcgtcggc cagccggcgg cggagcgtct ccatcggtgt gcccgcctgg acggtcgcca
      421 ccaggtccgc ggggctgacc gagagcacgc gatcgagggc gcgcgcgctc accgcgagat
      481 cggcgggcgc gtcggtcgga agccaggtgc cgttcccttc gacccggatc ttccagccct
      541 cgtcgtgcgc cagccggcac accagggaga gcgcatcggg cgagtccggc gtcgcccgcg
      601 gaaggccgac cgagtcgcgg tccacgccgg cggtccccag gagcgcgcgg agccggccga
      661 acacgacgtc gctcatctcg ccgcccgcgt cgcgcgccac tcgcggcagg catgcaccgg
      721 taccaccttc cccggattgg cccgctcggc gggatcgaag gcgagccgca cggcgcgcat
      781 cgccgcgagc gtgtcggggt cgaagatcag gggcatgtaa tcgagcttgt cggagccgac
      841 accgtgctct ccggtgatgc tgccgcccgc gtccacgcag gcggccatga tctcgcggca
      901 ggccacctgc acccgggccg cgaggtccgc gtcccgccgg tcgaagctga tgttggggtg
      961 caggttgccg tccccggcat ggaagacgtt gctgatcgcg agccggtggc ggcgacggat
     1021 ctcttcgatc cggtccatga tgtccggcag ggcggagcgg gggaccaccg cgtcctgcac
     1081 cgcgaggtcg ggggcgatgc gccccatggc gccgaacgcc ttcttgcgcc cctgccagag
     1141 ccgggcgcga tcggccgggg tggaggcgct ccgcacctcg cgggccccgc gttgccgcag
     1201 gatctcgacc acggtgcccg actccgcctc caccgcgtcg gcgccgccgt cgagctcgac
     1261 caggagcacg gcggccgcgt cggtggggta gcccgcggcg tagatggagg cctccaccgc
     1321 cgccacgcag gcgcggtcca tcatctccag cgcggcgggc acgatgccgg tcccgatgat
     1381 ggcggagacg gcttcactgg ccgcgcgcac ggtggggaag tccgccagca tggtgcgcac
     1441 gctggatggg atcggctcca gccgcaccac gatccgggtc gcgatcccga acatcccctc
     1501 gctgcccacg aagaggccca cgaggtccgg cccccagggc tcgccctggc tggagcccag
     1561 gcggaccagc gaggcgtcgg gcagcacgac ctcgagctcg accacgtggt tggtggtgac
     1621 gccgtacttg aggcagtgcg gcccgccggc gttctcggcg acattgccgc cgacggtgca
     1681 ggccgcctgg ctcgaggggt cgggcacgta ctggagcccg taggggaggg ccgcctcgga
     1741 gaggcgcgcg ttcaccacgc cgggctggag cgtcgcccgg cggcgcaccg gatccacctt
     1801 caggatccgg ttcatccggg tgagggcgac gagcaccgcg tcgggattgg ccacggcgcc
     1861 gcccgagagg ccggtgccgg cgccccgcgc gacgaacggc gtcccggtga ggtggagaag
     1921 ccggatcagg tcccgcacct cggccgtgga gccgggcatc acgaccacgc cggggtagct
     1981 ctcgcgggtg gggaggccgt ccatcgtgta cgtcgccagc tccgcccggc ggtggcgcac
     2041 ccaccggggg ccgacgatgc ggccgagggc ctcgatcatc gcgggcgtca tggctcggtg
     2101 atcacgtcgg gccgggcccc gccgcggccg ttggtgtgcg cccgccggtg cacccgcagc
     2161 gcggactcga cacccgccgt gaggatgggc accagcatga gcagcccctg cacccggcgc
     2221 gcggtggagc gctccaccag gaggcgctgc ttcacgccgg gatcgcagtc gagcgccgcc
     2281 gcgacatgga aggacagtcc caccgcgtcg tccggcagac tcgactcctc gggctcgacg
     2341 tcgttgagct ggcgcaggag ggcgtaatag ccggcgaaga cctcgcgcag cttcgccggg
     2401 gagtcgtccg ccggctcggt gcccggctcg tcctcgaagg tctgcaccgt ggccacgtag
     2461 tagggcgcgt cgtccggcac cggctgcttc agcacgaagc gctcgccgcc
//
LOCUS       DASUYN010000153         2088 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_933328, whole genome shotgun sequence.
ACCESSION   DASUYN010000153 DASUYN010000000
VERSION     DASUYN010000153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2088
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_933328"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..218)
                     /locus_tag="VF061_02950"
     CDS             complement(<1..218)
                     /locus_tag="VF061_02950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668487.1"
                     /translation="MDRPWWELYGYSSQEEWWEDELRKAEAERRRSGRRRVPRGRVPA
                     GEAPERPAGRHRRPCQVNVKLTEGDFVAL"
     gene            complement(401..1207)
                     /locus_tag="VF061_02955"
     CDS             complement(401..1207)
                     /locus_tag="VF061_02955"
                     /inference="COORDINATES: protein motif:HMM:NF037170.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX6668488.1"
                     /translation="MSERSEYSSGEFCWVDVSLPDTDAGAEFYRDLAGWDWESGGEET
                     NNYGMFTRDGKIVAGMGPTQSDEQPPAWASYVSVEEADATAARITEAGGTVMMEPFDV
                     LDAGRMAVCADPQGAVFCIWQPKQTHGAELVNEVGSWTWNQLATTDLEAAEKFYSEVF
                     GWKLAGPPPEGQPESGEYFMWQVDGQRWEEGIAGGMRMEAGQFPPGVPPHWMVYLAVE
                     DAEAAVETTKKAGGQILVEPTDIPVGRLAVMVDPQGAPFAVIQPDYPGPR"
     gene            complement(1207..1962)
                     /locus_tag="VF061_02960"
     CDS             complement(1207..1962)
                     /locus_tag="VF061_02960"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX6668489.1"
                     /translation="MNYVRRGEGKPLLLLHSLGGSLVQWSPVMDRLAERRDVIAVDMP
                     GFGGSPPLPEGIEHTAANLARAVLDFYKSFALGPPGVAGISLGGWSAIECARQGGASS
                     VVALCPAGFWPSPLGPRPNTAYDVARRIRPLAPLLMRSRGLRHRALASNVQNPERVPL
                     RDAIDLVQGYGGAEGYVESNRLMRANTVGDLSGLEAPLLIAWAEFDRLVRNRPLPPGV
                     LPPEVRQTTLPGCGHVPTWDDPELVSSVILEGT"
BASE COUNT          285 a          800 c          697 g          306 t
ORIGIN      
        1 agcgcaacga agtccccctc ggtcagcttc acattcacct gacacggtct ccggtggcgc
       61 ccggcgggcc gctccggagc ttctccggcc ggcacccgcc ctcgcgggac ccgccgccgg
      121 cccgaccttc gcctctcggc ctcggccttc cggagctcgt cctcccacca ctcctcctgg
      181 ctcgaatacc cgtagagctc ccaccacggc cggtccatcc tgccttgagg gccttgcggt
      241 gattcctatt cgcccatggg tccatgggaa acgaagcgcg ccggcgcagt taccaccggg
      301 tacttgtgag gtaccggctg gtaaccgcgc tggagggacg aagcgcgcgg acgagattca
      361 ccctggcgat cacgcgccac cgcgctgggt gccctgtggg ctagcgcggc ccggggtagt
      421 ccggctggat cacggcgaac ggcgcaccct gcgggtccac catcacggcc aggcggccga
      481 ccgggatgtc ggtcggctcg accaggatct ggccgcccgc cttcttcgtg gtctcgaccg
      541 cggcctcggc gtcctccacg gccagataga ccatccagtg cggtgggacc ccgggaggga
      601 actgcccggc ctccatccgc atcccgccgg cgatcccctc ctcccacctc tgcccgtcga
      661 cctgccacat gaagtactcg cccgactcgg gctggccctc cggcggcggg cccgccagct
      721 tccagccgaa gacctccgaa tagaacttct cggccgcctc caggtcggtg gtggcgagct
      781 ggttccaggt ccacgagccg acctcgttga cgagctccgc gccgtgggtc tgcttgggct
      841 gccagatgca gaacaccgca ccctgggggt cggcgcagac cgccatccgg cccgcgtcca
      901 ggacgtcgaa gggctccatc atcacggtcc cgccggcctc ggtgatcctg gcggccgtcg
      961 cgtcggcctc ctcgaccgag acgtagctcg cccaggcggg gggctgctcg tcgctctggg
     1021 tcggccccat cccggcgacg atcttgccgt cgcgggtgaa catgccgtag ttgttggtct
     1081 cctcgccgcc cgactcccag tcccagccgg ccaggtcgcg gtagaactcc gcgcccgcgt
     1141 cggtgtcggg cagggaaacg tccacccagc agaactcgcc ggagctgtat tcgctgcgct
     1201 cgctcatcag gtcccctcga gtatcacgct tgagaccagc tcggggtcgt cccaggtggg
     1261 gacgtgcccg cagccgggca gggtcgtctg gcggacctcg gggggcagga cgccgggggg
     1321 cagcggccgg ttgcggacca gccggtcgaa ctccgcccac gcgatcagca ggggcgcctc
     1381 caggccgctc aggtcgccga ccgtgttcgc ccgcatcagc ctgttcgact cgacgtagcc
     1441 ctccgccccg ccgtagccct gcaccaggtc gatcgcgtcg cggagcggga cgcgctcagg
     1501 gttctgcacg ttggaggcca gcgcgcggtg gcgcaggccg cggctgcgca tcaggagcgg
     1561 cgccagcggc cggatgcgcc tggccacgtc ataggcggtg ttcgggcgcg gccccagcgg
     1621 cgagggccag aaccccgcgg ggcagagcgc gacgaccgac gacgcgccgc cctggcgggc
     1681 gcactcgatc gccgaccagc cgccgaggga gatcccggcg accccgggcg ggccgagagc
     1741 gaacgacttg tagaagtcga gcaccgcgcg agccaggttg gcggccgtgt gctcgatccc
     1801 ctccggcagg ggcggcgaac ccccgaaccc cggcatgtcc accgcgatca cgtcgcgccg
     1861 ctcggccagg cgatccatca ccggcgacca ctggaccagc gagccaccga gcgagtgaag
     1921 gagaaggagg ggcttcccct cccccctcct gacgtagttc acaggtcgag ctcgtagttc
     1981 ttccagacct cgcccgtgcc gccgacccgg tcgtacacgg cctgcgcgcg ctcgttgtcc
     2041 gttgccgtca gccactccag cttcggcgct ccccgctccc ggcagcgc
//
LOCUS       DASUYN010000154         6598 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_711875, whole genome shotgun sequence.
ACCESSION   DASUYN010000154 DASUYN010000000
VERSION     DASUYN010000154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6598)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6598)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6598
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_711875"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1395
                     /locus_tag="VF061_02965"
     CDS             <1..1395
                     /locus_tag="VF061_02965"
                     /inference="COORDINATES: protein motif:HMM:NF038032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CehA/McbA family metallohydrolase"
                     /protein_id="HEX6668490.1"
                     /translation="DRADRPFEYGYFHTSGSAVLRLPAGRYFVEVSRGLEYQVVNRTV
                     QVAADVVTPLRVSLPVVDDLEARGWYSGDLHVHMNYGGIYRNDPARLALQARAEDLHV
                     VENLIVNKEGRVPDVGYFRPEPDPASSPGTLIVHGEEYHTSYWGHVGLLGLREHLIMP
                     GYTAYANTAVASLQPTNARVLDLARAQGGVTGYVHPYDAYPDPSDTSRALTHALPVDL
                     ALGKVDYYEALGFVDDLMATAAVWYRLLNCGFRLPAGAGTDAMANFASLRGPVGMNRV
                     FVKSGARLEHRRWLAALKAGRTFATNGPLIEMTVGGTEPGGEVLLPSGGGDVTVSVRL
                     RSNVPVDHLELVQDGRVVQELPIAADRRSASATTRLTVERSGWLLLRARGANAAYPTL
                     DIFPYATTSPVYLTVDGRPPRSAEDAKYFLDWIDRMRTSVEAHRDWNNDAERRETLAM
                     LAQARAEYERRSRE"
     gene            1421..2740
                     /locus_tag="VF061_02970"
     CDS             1421..2740
                     /locus_tag="VF061_02970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEX6668491.1"
                     /translation="MTTYARRLGLFSGTMAVVGGIIGGGIFRTPAAVAERVGSSWLIL
                     AVWAVGGTVALAGALCFGELGQRSPRAGGGYVYLRETWGPLPAFLYGWALLLVIASGA
                     IAAIAVTFADYTLALTGLPRRFALPLAIAAIVLVSAVNYLGVRPGAAVQNVFTLLKLL
                     ALAALVGIGLLAGLPPTAPAPPGAPAAIGAALVPVLFTYGGWQQTNFIAEEMVDPERD
                     LPRALLLGVAVVVATYLLANLAYLQVLGPAGLAASTAPAADAMRRVLGPVGGSLISAG
                     IAVSTFGFLNLVVLVTPRVFQAMAADGVFFPQLARLHPVHRTPAAAIVLQAGWASALA
                     LSGSFSQLVDYVAFADWVFFGLTVAGLFVYRERDRATGRVAPPGVFRVPGYPWTPAVF
                     VGSALVVVVSSILAAPRNALTGTGMLLLGVPVYWYWSREGRRVRPPA"
     gene            complement(2744..3745)
                     /locus_tag="VF061_02975"
     CDS             complement(2744..3745)
                     /locus_tag="VF061_02975"
                     /inference="COORDINATES: protein motif:HMM:NF012742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000976 - transcription cis-regulatory
                     region binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEX6668492.1"
                     /translation="MAQPTILDVAARAGVSKSLVSLVMRDSPSVSEAKRRAVLAAVAE
                     LDYRPNAVARSLVQRRTGVLGVLLSDLHNTFFADVLDGIAGRAAERGYKAMLNTGNRA
                     ASGEADAIETLLELRADGLILTGPRLEAAQITEAARAVPVVLVARTIPGSTVDCVSND
                     DVAGASLAVEHLVKLGHRRIAHIDGGAGAGAEARKQGYARTMRRHGLGGQGRTARGDY
                     TEEGGAKGVAALLARGPRPTAIFAANDLSAIGALDALTRRGLRVPEDMSVVGYDNTSV
                     AALRRIDLTTIDQPRVAMGQAAVDLLLERLERRRKAPRRVVMPPALVVRGTTGAPPE"
     gene            3897..4892
                     /locus_tag="VF061_02980"
     CDS             3897..4892
                     /locus_tag="VF061_02980"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX6668493.1"
                     /translation="MRVGVVGVGRIGSFHAGVLAGHPAVEQVLVTDPDLDRAEAVARE
                     IHGRPAPSVDALLAGVDAVVITAPTVTHADLIRQAVDAGLPTFCEKPITIDLASTEAV
                     IEHVRRRGATVQMGFQRRFDAGYRQARELVACGTLGRLYVVRVAGHDPHPPHDDYIPG
                     SGGIFRDLHIHDFDIARWVTGQDVVEVYADGSDAGFEAFARHGDVAAAVATLRFDGGT
                     LGILSGTRHDPLGYDVRMEVFGAGDSVAVGWDPRMPLRSVEPGAAPAPAEPYAFFLDR
                     FAPAYRAELHAFVEVAAGRMENPCPPEDAREAIRVAMACDLSRELHRPVRVEEVA"
     gene            4889..5782
                     /locus_tag="VF061_02985"
     CDS             4889..5782
                     /locus_tag="VF061_02985"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HEX6668494.1"
                     /translation="MSARSFRLAGAPITWGVCEVPGWGCQLAADRVLREVAGAGLDAV
                     ELGPRGFLPNEPAEVARTLRRHDLRLAAGFVPAVLHRPRDRDAALAAIAAAADTLAAA
                     GADLLVLAAELGNGAGGYDRSAELADADWRGLLEGLDRAREVAARHGLPLALHPHFGT
                     AVERRTDVERVIAESDVPLCLDTGHLLVGGADPLAIARAANGRVTHVHLKDVDAALAE
                     RVRAGEIGYREAVAGGLYLPLGEGDVDVAGVVRQVRASGYAGWYVLEQDIVLEAEPPE
                     GDGPVRAAARSVDYLKRIMAA"
     gene            5779..>6598
                     /locus_tag="VF061_02990"
     CDS             5779..>6598
                     /locus_tag="VF061_02990"
                     /inference="COORDINATES: protein motif:HMM:NF024799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEX6668495.1"
                     /translation="MNRAARLGGAALALGLWACGGAGRPDADGGGAGGGAGERSTVRI
                     VMVSHGQTSDPFWSVVANGAGDAARELGVRLEYQAPTSFDMVRLSQLIDAAVASRPSA
                     LAISVPDPDALAASVKAAVAAGIPALSVNSGDAAWERLGFLGHIGQTEYESGVAAGER
                     LAAGGARRVLCVNHEVGNVSLDTRCRGLADGLAKQGATMQVLGVSLADPEDAAQRIRS
                     ALARDAAVDGMLMLGPGGAAPALAALRESDRLGRIAVGTFDLTPEVLAAVRDGQL"
BASE COUNT          806 a         2361 c         2446 g          985 t
ORIGIN      
        1 gatcgagccg accggccctt cgagtacggg tacttccaca cctcggggtc cgccgtgctg
       61 agactgccgg ccggacggta cttcgtcgaa gtgtcccgag gtctggagta ccaggtcgtc
      121 aaccgcaccg tgcaggtggc ggcggacgtg gttacaccgc tgcgagtctc gcttccggtc
      181 gtcgacgacc tggaggcgcg cggctggtac agcggcgatc tccacgtgca catgaactac
      241 ggcgggattt accgcaacga tccggcgagg ctcgcgttgc aggcgcgggc ggaggatctc
      301 catgtcgtgg agaacctgat cgtgaacaag gagggcaggg ttcctgacgt aggatatttc
      361 cgccccgagc ccgacccggc gtcgtcgccg ggcaccctga tcgttcacgg ggaggagtac
      421 cacaccagct actggggcca cgtcggactg ctgggcctgc gcgagcacct gatcatgccg
      481 ggctacaccg cctacgccaa caccgcggtc gcgagcctgc agcccaccaa cgcgcgggtg
      541 ctcgacctcg cgcgggcgca gggcggcgtc accggctacg tgcacccgta cgacgcgtac
      601 ccggatccct ccgacacttc gcgcgccctc acccatgccc tgcccgtgga cctcgccctg
      661 gggaaagtgg actactacga ggccctgggc ttcgtggacg acctgatggc gaccgccgcg
      721 gtgtggtatc gcctgctgaa ctgcggcttt cggcttcccg cgggcgcggg caccgacgcg
      781 atggcgaact tcgcctcgct gcgcgggccg gtggggatga accgcgtctt cgtgaagagc
      841 ggcgcgcgcc tggagcaccg ccgctggctc gccgcgctca aggccggccg gaccttcgcc
      901 accaacgggc cgctgatcga gatgaccgtg ggcggcaccg agcccggggg cgaggtcctg
      961 cttccgtccg gaggaggcga cgtgaccgtg tccgtgcggc tgcggtcgaa cgttccggtg
     1021 gaccatctcg agctggtcca ggacgggcgt gtggtgcagg agctcccgat cgccgccgat
     1081 cgtcggtcgg cttccgccac cacccggctc acggtggagc ggagcggatg gctgctcctg
     1141 cgggcccgag gcgcgaacgc ggcgtatccg acgctggaca tcttccccta cgcgaccacc
     1201 agcccggtct acctgacggt ggacggccgg cctccgcgct cggccgagga tgcgaagtac
     1261 ttcctggact ggatcgaccg catgcgcacg tcggtcgagg cccaccggga ctggaacaac
     1321 gacgccgagc ggcgggagac gctggcgatg ctggcgcaag cccgcgcgga atacgagcgg
     1381 cggagtcggg agtagccgca accaaccgca ggagcccggg gtgaccacct acgcccggag
     1441 gctgggactc ttctccggaa ccatggccgt cgtgggcggg atcatcggag gcggcatctt
     1501 ccgcaccccc gccgcggtgg ccgagcgggt gggatcgtca tggctgatcc tcgccgtgtg
     1561 ggcggtggga ggcacggtgg ccctggcggg tgccttgtgc ttcggcgagc tgggccagcg
     1621 gtctccccgg gccggcggcg ggtacgtgta cctgcgagag acctggggcc cgctgccggc
     1681 ctttctctac ggctgggcgt tgttgctggt catcgccagc ggcgccatcg cggccatcgc
     1741 cgtgactttc gccgattaca ccctggccct caccgggttg ccccggcgct tcgccctgcc
     1801 cctggcgatc gcggccatcg tgctggtctc ggccgtcaac tacctgggcg ttcgcccggg
     1861 cgccgcggtc cagaacgtct tcaccctgct caagcttctg gcgctcgccg cgctggtcgg
     1921 gatcggcttg ctggccggac tcccgcccac cgctccggcg ccgcccggtg cgccggcggc
     1981 catcggcgcg gcgctggtcc cggtgctgtt cacctacggc gggtggcagc agaccaactt
     2041 cattgccgag gagatggtgg accccgagcg cgacctcccc cgtgcgctgc tgctgggggt
     2101 ggccgtggtg gtcgccacgt acctgctcgc gaacctcgcc tatctccagg tcctcggccc
     2161 cgcgggtctg gccgccagca ccgccccggc cgcggacgcc atgcgccggg tgctcggccc
     2221 ggtcggcggc agcctgatct ccgccggcat cgccgtctcc accttcgggt ttctcaatct
     2281 ggtcgtgctg gtgacgcccc gggtgtttca ggccatggcc gcggacggcg tgttctttcc
     2341 ccagctcgcc cgcctgcatc cggtccaccg gacaccggcc gccgcgatcg tgcttcaggc
     2401 ggggtgggcc tccgcgctgg cgctctcggg gagcttcagc cagctggtgg actacgtcgc
     2461 cttcgccgat tgggtgttct tcgggctcac cgtggcgggg ctgttcgtgt accgggaacg
     2521 tgatcgtgcc accggccggg tcgctcctcc cggggtgttc cgggtaccgg gctatccgtg
     2581 gacgccggcg gtgttcgtcg ggtcggcact ggtcgtcgtg gtgagctcga tcctggcggc
     2641 tccccgcaac gcgctcaccg gcacggggat gctgctgctc ggcgtaccgg tgtactggta
     2701 ctggagcagg gaagggcggc gggtgcggcc tccggcctag ccgtcactcc ggcggggctc
     2761 cggtggtgcc gcggaccacg agggcggggg gcatcaccac ccgccgcggg gccttccgcc
     2821 ggcgctccag ccgttccagc agcaggtcca ccgcggcctg ccccatggcc accctcggct
     2881 gatcgatggt ggtgagatcg atgcggcgga gcgcggcgac ggaggtgttg tcgtagccca
     2941 ccaccgacat gtcctcgggg acgcggaggc cgcgccgggt gagcgcgtcg agcgccccga
     3001 tggcgctgag gtcgttcgcc gcgaagatcg cggtcggcct cggacctcgc gccagcagcg
     3061 ccgccacgcc tttggctcct ccctcctcgg tatagtcgcc ccgggcggtg cgcccctggc
     3121 cgccgagccc gtgccgccgc atggtgcggg catagccctg cttccgcgcc tcggcgccgg
     3181 caccggcgcc gccgtcgatg tgggcgatgc gccggtggcc cagcttcacc aggtgctcca
     3241 cggcgagcga cgcgccggcc acgtcgtcgt tgctgacgca atccaccgtg ctgcccggga
     3301 tggtgcgcgc caccagcacc accggcaccg cgcgcgcggc ttcggtgatc tgggccgcct
     3361 cgagccgggg gccggtgagg atcagcccat cggcccgcag ctcgagcagg gtctcgatgg
     3421 cgtccgcctc gccgctggcg gcgcggttgc cggtgttgag catggccttg tagccccgct
     3481 ccgcggcgcg gcccgcgatg ccgtcgagca cgtcggcgaa gaacgtgttg tgcaggtcgg
     3541 agagcagcac gccgaggacc ccggtgcggc gctgcaccag gctgcgggcc accgcgttgg
     3601 gccggtagtc cagctccgcg accgcggcga gcaccgcgcg ccgcttcgcc tcgctgaccg
     3661 acggggagtc gcgcatgacg agggagacca gcgacttgga cacaccggcg cgggcggcga
     3721 cgtcgaggat cgtgggctgg gccatgcggg ctccggagct ggcgaggcgg cgcggtgctt
     3781 gacagcgggg tgaccgctcc gtatctatga gtagcgctgg aacgttccaa acgcaagttg
     3841 gagcgttcca aacccgcgtc gcagaccttc cagccccgcc tcgaggacct cttcacatgc
     3901 gcgtcggcgt cgtcggcgtc ggtcgaatcg ggtcgttcca cgccggcgtc ctcgccggac
     3961 accccgccgt ggagcaggtc ctcgtcaccg atcccgacct cgaccgtgcc gaggcggtgg
     4021 cgcgggagat ccacggccgc ccggcgccct cggtcgacgc gctgctcgcc ggggtggacg
     4081 ccgtcgtcat caccgcgccc accgtcaccc atgccgacct catccgccag gcggtggacg
     4141 cggggctgcc gaccttctgc gagaaaccca tcaccatcga cctcgcctcg accgaggccg
     4201 tgatcgagca cgtacgccgt cggggcgcca ccgtccagat gggcttccag cgccggttcg
     4261 acgccggcta ccgccaggcc cgcgagctgg tcgcctgcgg caccctgggc cggctctatg
     4321 tggtccgcgt ggcgggccac gacccgcacc ccccgcacga cgactacatt cccggctccg
     4381 gcggcatctt ccgcgacctc cacatccatg acttcgatat cgcccggtgg gtcaccgggc
     4441 aggacgtggt cgaggtctac gccgacggct cggacgcggg cttcgaggcc ttcgcccgcc
     4501 acggcgacgt ggccgcggcc gtggccacgc tgcggttcga cggcggaacg ctcggcatcc
     4561 tctccggtac ccgccacgat cccctgggct acgatgtccg catggaggtg ttcggcgccg
     4621 gcgacagcgt ggcggtgggc tgggatccgc ggatgccgct ccgctcggtg gagccgggag
     4681 ccgcgccggc accggcggag ccctacgcgt tcttcctgga ccgcttcgcc ccggcgtacc
     4741 gagcggagct ccacgccttc gtcgaggtcg ccgcgggccg gatggagaat ccctgcccgc
     4801 cagaggacgc ccgcgaggcg atccgggtgg ccatggcctg cgacctctcc cgcgagctcc
     4861 accggccggt ccgggtcgag gaagtcgcgt gagtgcgcgg tcgttccggc tcgccggcgc
     4921 cccgatcacc tggggcgtgt gcgaggtgcc ggggtggggc tgtcagctgg ccgcggaccg
     4981 ggtgctgcgc gaggtggccg gcgcgggcct ggatgcggtc gagctcgggc cgcggggctt
     5041 cctgccgaac gagccggccg aggtggcgcg cacgctccgg cgccacgacc ttcggctggc
     5101 ggcggggttc gtgcccgccg tgctgcatcg tccgagggac cgcgacgcgg cgctcgcggc
     5161 gatcgcggct gccgccgaca ccctcgcggc ggccggcgcc gatctcctcg tactcgcggc
     5221 cgagctgggg aatggcgccg gaggctacga ccgctcggcc gagctcgccg atgccgactg
     5281 gcgcggactc ctggagggac tggaccgggc cagggaggtc gcggcccggc atgggctccc
     5341 cctcgccctc cacccccact tcggcaccgc ggtggagcgc cgcaccgacg tggagcgggt
     5401 gatcgcggag agcgacgtcc ccctctgtct cgacaccggc cacctgctcg tgggtggcgc
     5461 cgatccgctg gcgatcgcgc gcgccgcgaa cggccgcgtg acccacgtcc acctgaagga
     5521 cgtggacgcg gccctggccg agcgagtccg ggcgggcgag atcggctacc gcgaggcggt
     5581 ggcaggcggg ctctatctcc cgctgggcga gggtgacgtg gacgtcgccg gcgtggttcg
     5641 ccaggttcgc gcgtcggggt acgccggctg gtacgtgctg gagcaggaca tcgtgctcga
     5701 ggctgagcct ccggaaggcg acggaccggt ccgggcggcg gccagaagcg tggattacct
     5761 gaagaggatc atggcagcgt gaatcgggca gcgaggcttg gcggcgccgc actcgcgctg
     5821 ggtctctggg cctgcggtgg agcagggcga ccggacgcgg acgggggcgg cgccgggggc
     5881 ggcgccgggg agcggagcac cgtccggatc gtgatggtga gtcatggcca gacctcggat
     5941 ccgttctggt cggtcgtggc caacggcgcc ggagacgcgg cccgggagct gggggtccgc
     6001 ctggaatacc aggcgccgac cagcttcgac atggtgcggc tgagccagct gatcgacgcc
     6061 gccgtggcca gtcggcccag cgccctggcg atctcggtac cggatcccga tgccctggcg
     6121 gcctcggtca aggccgcggt ggccgccggc atcccggcgc tctcggtgaa ctccggcgac
     6181 gcggcctggg agcgactggg cttcctcggc cacatcggcc agaccgagta cgaatcgggc
     6241 gtggccgcgg gtgagcgcct cgccgcggga ggcgccaggc gggtgctctg cgtcaaccac
     6301 gaggtcggca acgtgtcgct cgacacccgc tgccgcggct tggccgacgg gctcgccaag
     6361 cagggggcga ccatgcaggt gctcggcgtg agcctcgccg accctgagga cgcggcgcag
     6421 cggatccgga gcgcgctcgc gcgtgatgcc gcggtcgacg ggatgctgat gctggggccc
     6481 ggcggcgccg cacccgccct ggcggcgctc cgggagtccg accggctggg acggatcgcg
     6541 gtcgggacct tcgatctcac gccggaagtc ctggcggcgg tccgcgacgg tcagctgc
//
LOCUS       DASUYN010000155         2725 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1373611, whole genome shotgun sequence.
ACCESSION   DASUYN010000155 DASUYN010000000
VERSION     DASUYN010000155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2725)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2725)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2725
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1373611"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..615)
                     /locus_tag="VF061_02995"
     CDS             complement(<1..615)
                     /locus_tag="VF061_02995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HEX6668496.1"
                     /translation="MSSPHYDVIVIGSGAGGGTLAYRLAPSGKRILILERGEYVPRER
                     ENWSTRAVNVEGRYQTQERWRAQDGTELHPHTNYGVGGNTKFYGAALFRLRQEDFGEL
                     RHHGGLSPAWPIAYADLEPYYTEAEHLYQVHGERGEDPTDPPASAGYRYPAVSHEPRI
                     QQLSEDWARAGCRPFHVPLGIMLDESDRRRSRCIRCATCDGHPCL"
     gene            complement(657..1391)
                     /locus_tag="VF061_03000"
     CDS             complement(657..1391)
                     /locus_tag="VF061_03000"
                     /inference="COORDINATES: protein motif:HMM:NF038123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spondin domain-containing protein"
                     /protein_id="HEX6668497.1"
                     /translation="MLIARAVSLSLMALAAAGSVMAQGAPAATTFTVRVENVSRGEAL
                     KLSNGQTAPFVAAPVFWTLHTGAANPIFTGGQPESGNGLEQLAETGNPEGLLKYISAM
                     SGVAGVGANARPVGATSDGPLTPGQAYEFEVSAAPGQSLSLAWMFGQSNDLFYSNDRP
                     IALFVGGEPVSGDQTPQLSLWDAGTEVNEEPGLGPNQAPRQKSPEAGTAERESVSHVR
                     DRYTYPRLAEVVRLTVTPSTSSVSAN"
     gene            complement(1404..>2725)
                     /locus_tag="VF061_03005"
     CDS             complement(1404..>2725)
                     /locus_tag="VF061_03005"
                     /inference="COORDINATES: protein motif:HMM:NF012455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DM13 domain-containing protein"
                     /protein_id="HEX6668498.1"
                     /translation="PVLRIEYAIEAGLLGLFMLSACGFVVLLEHPSSPVRLALPSAGL
                     RRVLMGLAMGGTAMALIYSPWGRRSGAHMNPATTLTFARLGKVAPGDARAYVIAQFLG
                     GAAGVLLASLGLGAWLADPATNYAATVPGPAGVPVAFGAEVVIAFVLMYVILTVSNTP
                     GRAHLTGLCAGGLVALYIAVEAPLSGMSMNPARTFGSAVFARDWTALWIYFVAPPLGM
                     LAAAELYLRRRGRGAVFCAKLCHAEPCLFCDWRRGSHVLEPIPTPPHFTRRRHPTTKE
                     KERMRRRTWIIGLVVLGAIGWYLFRPELLFVKTTVNETLPAEAVAQSPATGVVLSGQF
                     RSYAHETVGTAAVHQLGDRQVLRLTGFSTSNGPDVRVYLVAANDATDDETVTRAGFVE
                     LGKLKGTQGDQNYDIPAGLDLTRYRAVTIWCRRFSVNFGTAPLTPTS"
BASE COUNT          412 a          947 c          981 g          385 t
ORIGIN      
        1 caggcagggg tgaccgtcgc aggtggcgca gcggatgcag cggctccggc ggcggtcgct
       61 ctcgtccagc atgatgccca gcggaacgtg gaagggcctg cagccggccc gggcccagtc
      121 ctcgctcagc tgctggatcc ggggctcatg gctcaccgcc gggtaccggt agcccgcgct
      181 ggccggcggg tcggtgggat cttcaccccg ctcgccgtga acctggtaca ggtgttcggc
      241 ctcggtgtag tagggctcga ggtcggcgta ggcgatcggc catgccggcg agagtccccc
      301 gtggtggcgc agctcgccga agtcctcctg ccgcagccgg aacagggcgg ccccgtagaa
      361 cttggtgttg cctccgaccc cgtagttggt atgcgggtgc agctcggtgc cgtcctgggc
      421 ccgccaccgc tcctgggtct ggtagcggcc ctccacgttg accgcccggg tgctccagtt
      481 ctcccgctcg cgcggcacgt actcaccccg ttcgaggatc aggatccgct tgccggacgg
      541 cgcgaggcgg taggcgagcg tcccaccgcc cgccccgctg ccgatcacga tgacgtcata
      601 gtgtggtgag ctcatgagcg gacacctgcg cgactgcgtg aagggggaag gaccgcctaa
      661 ttcgcgctca ccgacgaggt ggagggcgtg accgtcagcc gcacgacctc ggcgaggcgc
      721 ggataggtgt agcggtcgcg cacgtggctc accgactccc gctcggcggt gcccgcctcg
      781 ggcgacttct gccgcggagc ctggttgggg ccgagcccgg gctcctcgtt gacctccgta
      841 ccggcatccc agagcgagag ctgcggagtc tggtcgccgc tcaccggctc gccgcccacg
      901 aagagcgcaa tcgggcggtc gttggagtag aacaggtcgt tcgactggcc gaacatccac
      961 gccagcgaga gcgactgccc cggtgcggcg gacacttcga actcgtacgc ctgcccgggc
     1021 gtgagcggcc catcggacgt ggcgccgacc gggcgcgcgt tcgccccgac cccggcgact
     1081 cccgacatcg ccgagatgta cttcagcagg ccctcggggt tgccggtctc ggccagctgc
     1141 tcgaggccgt tgcccgactc cggctggcca ccggtgaaga tcgggttggc ggcgccggtg
     1201 tggagcgtcc agaagacggg cgcggcgacg aagggcgcgg tctgcccgtt ggacagcttc
     1261 agggcctcgc cccgggacac gttctccacc cggacggtga aggtggtggc cgcgggggcg
     1321 ccctgcgcca tcacactccc ggcggcggcg agcgccatga gcgacagcga gactgcgcga
     1381 gcgatgagca ctggggcctc ctctcaggac gtgggggtga gcggcgcggt gccgaaattc
     1441 acgctgaacc ggcggcacca gatggtgacg gcccgatagc gcgtcagatc gagacccgcg
     1501 gggatgtcgt agttctggtc gccctgggtg cccttgagct tgcccagctc gacgaaccct
     1561 gcgcgggtga ccgtctcgtc gtcggtcgcg tcgttcgcgg ccacgaggta gacccgcaca
     1621 tccggaccgt tggaggtgct gaagccggtg agccgcagca cctgccggtc gccgagctgg
     1681 tgcaccgcgg cggtgccgac ggtctcgtgg gcgtaggaac ggaactgacc actcagcacc
     1741 acgccggtcg ccgggctctg ggccacggcc tcggcgggca gggtctcgtt caccgtggtc
     1801 ttgacgaaca gcagctcggg ccggaagagg taccagccga tcgcgccgag gacgaccagg
     1861 ccgatgatcc aggtacggcg tcgcatacgc tccttctcct tggtggttgg gtgacgacgc
     1921 cgggtgaaat gcgggggagt ggggattggt tccaggacgt ggctcccgcg gcgccagtcg
     1981 cagaagagac agggctccgc gtggcacagc ttggcgcaga acaccgctcc cctgcccctc
     2041 cgccgcaggt acagctccgc cgcggcgagc atgccgagtg gtggcgcgac gaagtagatc
     2101 cagagcgcgg tccagtcccg cgcgaacacg gccgagccga aggtgcgggc cgggttcatg
     2161 ctcatccccg agagcggcgc ctccaccgcg atgtacaggg ccacgagacc gccggcgcag
     2221 agcccggtca gatgggctcg cccgggggta ttggacacgg tgagaatcac gtacatgagc
     2281 acgaacgcga tgacgacttc cgcgccgaat gccaccggca ccccggccgg acccggcaca
     2341 gtggcggcgt agttggtcgc ggggtcggcc agccacgcgc cgagcccgag gctcgccagc
     2401 agcacgccgg ccgctccccc gagaaactgc gcgatcacgt acgccctggc gtcccccggg
     2461 gcgacctttc ccagccgcgc gaaagtcagc gtggtcgccg gattcatgtg cgcacccgag
     2521 cggcggcccc agggcgaata gatcagcgcc atcgccgttc cgcccatggc gaggcccatg
     2581 agcacccgcc gcaggcccgc gctgggcagc gccagccgca ccggcgacga cggatgctcc
     2641 agcagcacca cgaagccgca cgccgacagc atgaacaggc cgagcaggcc ggcctcgatc
     2701 gcatactcga tcctgagcac cggcg
//
LOCUS       DASUYN010000156         5199 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1373780, whole genome shotgun sequence.
ACCESSION   DASUYN010000156 DASUYN010000000
VERSION     DASUYN010000156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5199)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5199)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5199
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1373780"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..4334)
                     /locus_tag="VF061_03010"
     CDS             complement(<1..4334)
                     /locus_tag="VF061_03010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668499.1"
                     /translation="MAPVTLFDLLGIADGTDLDAAVERWPVHLVQGGPGAREQPDLTE
                     ARLLLQFLQGALTFRNVRPGADPDRVGLTAELLVGSAPNPLPLVLAAMPDVEFRLPPN
                     GGEPARVTVTAGDLGTELLIEALAVEIRFPAGLLEPLPPPGSDVPPPEDTPIDGFVPG
                     QHDTLRVVLRSHESSSVFVHLKVRMTEEGKFVVEPAVPLSIGPCRFSGLPCRGIHDLN
                     LFPAPMLGVGPGDERHFGDQALEWTRHALVADESPEFGVITVRTVDLDETRPPLSDVH
                     AKLNPSDAPEQRFEWVLEDLAFPIGTGPFPVPSHFLAGLRRDLKVGDDPDGAFNLGGL
                     AIPLEGAARLLRFKYLVIEQLLFRSVPSPALDPPTEDRQFAFVALALVDDPTGAGHGV
                     TLEVTDEWTVLAGWRKQPGLELFSLFGARFLLLGARAGLSLQRLTRGDGIFDSGVLVA
                     DIEITRRPKDDGTSPSAGIVKLEGEAKEPKGAVIHDFGLRFGEFAVGGVWKTGGAKLS
                     AFDVISLEIEEFGLVTEPSGAVYFGFSGSIPLPAGRDAGQPVTSAESAGSTGKVEDGV
                     GFRFYRLRGKVAGAEEAPQFLIDGIGLSIRYGKFGISGFGMMSEYVADGHRYKESGLS
                     IELRFPVGQIELILGGLFFQGSVRGPTQNFNYWMVGLHVSPIPIGPVMLTNVRLLFAW
                     NMAPALGPVDAGSATPMRLFQWYKSHSSAVALPANRSMGQGGWAPTDESYTAAVGAVV
                     EIGSRAIGIGAFFVYMSTPAGKVMLAGLEIYFLKSSKPIAYAAVEIEGDRWSVLAGLS
                     LGIENVIGRPVPLLSGVPFLTGTFYHTNKPGTTAIGQFLDPSTWLAVHVGGPQLDENG
                     QPKPAKFDLFTVELFSGICLQIVDLPEGPRVFALRVSVTGGSRLFKVGGIDFYLTLQL
                     VAGVWRTESKVSGFVVWFEGGLDIDVFYVFTWGASVRVECNYLGPEPTQRRLSTEVRI
                     HTPWWLPDVTFRWERSSGSTDMGRMRVVTTPVVDAAAKALAASEPVALPALAPVVGET
                     IDPAAVYGVEEMAGATGAIPAALVAQVATVPVDSSLALHFNASVDDLLVFGQNTTPGI
                     GADASNEVATRYELVELGIRRRPRAGGPWTTLIDAAESRAESLAGLTPEVAAERHRQK
                     LPFRWDADFKREGRPDTRRLLINTDAPYWSAVLDFEGDELLLQSEPGWPCCPPGPRRP
                     RWHTIDFRDVPAGSRVPRTQYFTESRSTLRWVGIAPPIAGPGQAAGGEASVARLNGDT
                     PPEGVFARLAFPEIAGAAELRVRWKPMHLVRALVVRAFRGLVLVEERSFKISQMPPDG
                     IAIASADGISEITLGFAGAAVDEPDVDFGWLEWIELRFRSVGEVLGDLLADGRCGAAP
                     TGSARPGGRFAWLPNHEYEVDFKTRVTVGYTRSGDLVREVPQTLLFRTAGLPGQNRAD
                     HVGAEFAP"
     gene            complement(4338..>5199)
                     /locus_tag="VF061_03015"
     CDS             complement(4338..>5199)
                     /locus_tag="VF061_03015"
                     /inference="COORDINATES: protein motif:HMM:NF024491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phospholipase D-like domain-containing protein"
                     /protein_id="HEX6668500.1"
                     /translation="GGAGGWGDRMVVGTPFRRSVLAPAERFASIGRGNLTDEVVSATA
                     SKIYVGPPPRVPPTVPYFFWVAGELMYATDAKPVTSPGGHPAVELDVLRGSHQGTQTP
                     WCPHPRPHKAGAPVTFSAPRGIFVHAKLLMVDDLFVAIGSANWNRRGFFHDGEVDAFA
                     IPDRLRASRENPALLLRTALWAEHLGLTPFMGRSVLADPIEAFELFRRSRYQGNRYTD
                     YREFTAPRGDLAALNSAAIFELIPESVKITVIATANAFALSKMRDAWNTIFDPTTSVE
                     PNPTEGPELP"
BASE COUNT          793 a         1834 c         1866 g          706 t
ORIGIN      
        1 tacggcgcga actcggcgcc cacgtggtcg gcgcgattct ggccgggcag ccccgccgtg
       61 cggaagagga gcgtctgcgg cacctcccgc accaggtccc ccgagcgggt gtaccctacc
      121 gtcacgcgag tcttgaagtc cacctcgtat tcatggttcg gcaaccaggc gaagcgaccg
      181 cccggacgcg cggagcccgt cggtgccgcc ccacaccggc cgtccgcgag caggtcgccc
      241 agcacctctc ccacggagcg gaagcgcagc tcgatccatt cgagccagcc gaagtccacg
      301 tcgggctcgt ccaccgccgc gccggcgaag ccgagggtga tctccgagat gccgtccgcc
      361 gaagcgatcg cgatgccgtc cggcggcatc tgggagatct tgaagctgcg ctcctccacc
      421 aggaccagtc cccggaacgc gcgcacgacc agcgcccgga ccagatgcat cggcttccag
      481 cgcacccgga gctcggcggc accggcgatc tccgggaacg cgagccgggc gaagacgcct
      541 tcgggcggcg tgtcgccgtt gagccgcgcg acgctcgcct cgccgccggc cgcctgcccc
      601 ggtcccgcga tcggcggcgc gatcccgacc cagcggaggg tgctgcggct ctcggtgaaa
      661 tactgcgtcc ggggcacccg gcttcccgcc ggcacgtcgc ggaagtcgat cgtgtgccag
      721 cgcgggcgcc gcggccccgg cgggcagcag ggccagcccg gctcgctctg gaggaggagc
      781 tcgtcgccct cgaagtcgag caccgcggac cagtacggcg cgtcggtgtt gatcaggagc
      841 cgccgggtgt cggggcggcc ttcacgcttg aagtcggcgt cccagcggaa gggcagcttc
      901 tggcggtgcc gctccgccgc cacctccggc gtgaggccgg cgagcgactc ggcgcggctc
      961 tcggcggcgt cgatgagggt ggtccaggga ccgccggcgc gcgggcggcg gcggatgccg
     1021 agctcgacca gctcgtaccg cgtggcgacc tcgttgctgg cgtccgcgcc gatgccgggc
     1081 gtcgtgttct ggccgaagac gaggaggtcg tcgaccgacg cgttgaagtg gagcgcgagc
     1141 gagctgtcca ccgggaccgt cgccacctgg gcgactagcg ccgccgggat cgcccccgtc
     1201 gccccggcca tttcctcgac tccgtagacc gccgctggat cgatcgtctc ccccaccacc
     1261 ggcgcgagcg cgggcagggc cacgggctcc gacgcggcga gcgccttggc cgccgcgtcg
     1321 accaccggcg tggtcacgac gcgcatgcgc cccatgtcgg tggagccgct ggaccgctcc
     1381 cagcggaagg tcacgtccgg gagccaccag ggcgtgtgga tccgcacttc ggtggagagc
     1441 cggcgctggg tcggctcggg gccgaggtag ttgcattcga ccctcacgct ggcaccccag
     1501 gtgaacacgt agaagacgtc gatgtcgagc ccgccctcga accagacgac gaagccgctc
     1561 accttcgact cggtgcgcca gacgcccgcg acgagctgca gcgtcaggta gaagtcgatg
     1621 ccgccgacct tgaagaggcg cgaccctccg gtcacactca cgcgcaacgc gaagacgcgg
     1681 ggcccttccg ggaggtcgac gatctggagg cagatccccg agaacagctc gacggtgaag
     1741 aggtcgaatt tcgccggctt cggctgcccg ttctcgtcga gctgcggtcc acccacgtgg
     1801 acggcgagcc aggtggaggg gtcgaggaac tggccgatcg ccgtcgtgcc cggcttgttg
     1861 gtgtgataga acgtgcccgt gaggaacggc accccgctca gcagcggcac cggacggccg
     1921 atcacgttct cgatgccgag gctgagcccg gcgagcacgc tccagcggtc tccctcgatc
     1981 tcgaccgcgg cgtacgcgat cggcttgctg ctcttgagga agtagatctc gagccccgcc
     2041 agcatcacct tccccgccgg cgtgctcatg tagacgaaga aggcgccgat gccgatggct
     2101 cggctcccga tctcgaccac cgcgcccacc gccgccgtgt acgactcgtc ggtgggggcc
     2161 caccctccct ggcccatgct ccggttggcc ggtagcgcga ccgcgctgct gtggctcttg
     2221 taccactgga agagccgcat cggcgtggcc gagcccgcgt cgaccggccc cagcgcgggc
     2281 gccatgttcc acgcgaacag gaggcgcacg ttggtgagca tcaccggccc gatcgggatc
     2341 gggctgacgt ggagccccac catccagtag ttgaagttct gcgtcggacc ccgcaccgag
     2401 ccctggaaga agagcccgcc caggatgagc tcgatctgcc ccaccgggaa gcgcagctcg
     2461 atgctgagcc cggactcctt gtagcggtgc ccgtcggcga cgtactcgct catcatcccg
     2521 aagccgctga tcccgaactt cccgtagcgg atcgagagtc cgatcccgtc gatcaggaac
     2581 tgcggcgcct cctcggcgcc cgccaccttg ccgcgcaggc ggtagaaccg gaagccgacg
     2641 ccgtcctcga ccttcccggt cgagcccgcc gactcggcgc tcgtgaccgg ctgaccagcg
     2701 tcgcggccgg cgggcagcgg gatcgagccg ctgaacccga agtagaccgc cccgctcggc
     2761 tcggtgacga gcccgaactc ctcgatctcc agcgagatga cgtcgaacgc gctgagcttg
     2821 gcgccgcccg tcttccagac gccgccgacg gcgaactctc cgaagcggag cccgaagtcg
     2881 tggatcacgg cccccttcgg ctccttcgcc tcgccctcca gcttgacgat gcctgccgac
     2941 ggggaggtgc cgtcgtcctt gggccggcgg gtgatctcga tatcggcgac cagcaccccc
     3001 gagtcgaaga tcccgtcgcc gcgcgtcagg cgctggagcg agagcccggc gcgcgcgccg
     3061 agcaggagga agcgcgcacc gaagagcgag aagagctcga gccccggctg cttccgccag
     3121 ccggccagga ccgtccactc gtcggtgacc tcgagcgtga cgccgtggcc ggccccggtc
     3181 ggatcgtcca ccagcgccag cgccacgaag gcgaactgcc ggtcctccgt cggcgggtcg
     3241 agcgcgggag agggcacgct ccggaagagg agctgctcga tgaccaggta cttgaaacgg
     3301 aggaggcggg ccgcgccctc cagcgggatc gcgagtccgc cgaggttgaa ggccccgtcc
     3361 ggatcgtcgc cgaccttgag gtcgcgtcgc aggccggcga ggaagtgcga ggggaccggg
     3421 aacggcccgg tgccgatcgg gaaggcgagg tcttccagca cccactcgaa ccgctgctcg
     3481 ggcgcgtcgg aaggattgag cttcgcgtgc acgtcgctca gcggaggccg ggtctcgtcg
     3541 agatcgacgg tgcgcacggt gatcacgccg aactcggggc tctcgtcggc gaccagcgcg
     3601 tggcgggtcc actcgagggc ctgatcgccg aagtggcgct cgtcgcccgg gcccacgccg
     3661 agcatgggcg cggggaagag gttgagatcg tggatgcccc ggcacggcag cccgctgaac
     3721 cggcaggggc cgatcgagag cggaaccgcg ggctcgacga cgaacttccc ctcctcggtc
     3781 atccgcacct tcagatgcac gaagaccgac gaggactcgt ggctccggag cacgactcgg
     3841 agcgtgtcgt gctgtccggg tacgaagccg tcgatcggcg tgtcctccgg tggcggcaca
     3901 tcggagccgg gcggcggaag tggctccagg agaccggcgg ggaagcggat ctcgacggcc
     3961 agtgcctcga tcagcagctc ggtgccgaga tcgccggccg tgaccgtgac gcgcgccggc
     4021 tcgccgccgt tcggcggcag gcggaactcg acgtccggca tcgccgcgag caccagcggg
     4081 agcggattgg gagcggatcc gaccagcagc tccgcggtga gtccgacgcg gtcgggatcg
     4141 gcgccgggtc ggacgttccg gaaggtgagc gcgccctgga ggaattggag gaggaggcgt
     4201 gcctcggtca ggtcgggctg ttcgcgcgcc cccgggccgc cctgaaccag atgcaccggc
     4261 catcgctcga ccgcggcgtc gagatccgtc ccgtcggcga tgccgaggag gtcgaagagg
     4321 gtgaccggtg ccatgcgcta gggcagctcg ggaccctcgg tggggttcgg ctccaccgag
     4381 gtcgtgggat cgaagatcgt gttccaggcg tcgcgcatct tggacaaggc gaacgcgttc
     4441 gcggtggcga tcacggtgat cttcaccgac tccgggatca gctcgaagat cgcggcgctg
     4501 ttgagcgccg ccagatcccc ccgaggcgcc gtgaactccc ggtagtcggt gtagcggttg
     4561 ccctggtagc gcgagcggcg gaacagctcg aacgcctcga tcgggtccgc cagcaccgat
     4621 cgtcccatga acggcgtcaa cccgaggtgc tcggcccaga gcgcggtgcg gaggagcagc
     4681 gccggattct cgcgcgaggc gcggagccga tcggggatcg cgaaggcgtc gacctcgccg
     4741 tcgtggaaga agccacggcg attccagttg gccgaaccga tcgcgacgaa caggtcgtcc
     4801 accatcagca gcttggcgtg cacgaagatg ccgcggggcg cggaaaaggt gacgggcgca
     4861 ccggccttgt ggggacgcgg gtggggacac cagggcgtct gggtgccctg gtggctcccg
     4921 cggagcacgt cgagctcgac cgccgggtgg cccccggggc tcgtcaccgg cttcgcgtcc
     4981 gtggcgtaca tcagctcgcc cgccacccag aagaagtagg gcaccgtggg cggcacgcgc
     5041 ggcggggggc cgacatagat cttcgacgcg gtcgccgaaa cgacctcgtc cgtcaggttg
     5101 ccgcgcccga tggaggcgaa ccgctccgcc ggcgccagca ccgagcggcg gaacggggtg
     5161 cccacgacca tccggtcgcc ccagccgccg gcccctccg
//
LOCUS       DASUYN010000157         3928 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_493407, whole genome shotgun sequence.
ACCESSION   DASUYN010000157 DASUYN010000000
VERSION     DASUYN010000157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3928)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3928)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3928
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_493407"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(127..1248)
                     /locus_tag="VF061_03020"
     CDS             complement(127..1248)
                     /locus_tag="VF061_03020"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEX6668501.1"
                     /translation="MILAPWWGVRYALDLRRGKRVNPDRPFTLVLSGGGLKGLAHIGV
                     LRALEEHGLVPSLVVGSSIGSLVGAAWASGVPLRQMEERARAVRRRDIFQVASTDVAF
                     RRFMAPALYRREPLEFLVRSLVGDITFRELPRRLLVNTADLHSGIQVLWGLPGLLDTR
                     VADAVVASCALPGIFPPRVINGRSYVDGAVVENLPVRLAASLGSGPIVAVNVASTSVV
                     RASHETEGFAATYSRGLEIVMQTQIEGQLRDWQGPPLILVQPRVEHISMFAFDRNEEL
                     LEAGYRACSQTLASLGGRLDAVPQGMHPTRRLRVLVDDARCVGCGACVVQAPKVFRLD
                     SRGKAEVHTPVQTWSPMDGAYVLNCPTYAISVRPEDSAA"
     gene            1345..2499
                     /locus_tag="VF061_03025"
     CDS             1345..2499
                     /locus_tag="VF061_03025"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEX6668502.1"
                     /translation="MNGSRSYDVGVLRATEFPWTSDTVYLNNASIGPLPERTRVALDR
                     FNRGRAAPHLLPDRELFAMLADTRMKLARLVGASADEIALALNTGFGISTAARALPLE
                     PGDVVLVSDKEFPANVYPWMRLGDRGVRMELVPTTPEGWPDEARLLERLRDPRVRVLA
                     VSLVQFSSGYLVDLERLSAATRETGAFLVVDAIQAVGQLPLDLSRVQVDVLACGGQKW
                     LLSPWGSGFLYVRRELIGRLDPAITGWLAFEGTDDLSRLTRYDDTLRSDARRFELMTL
                     PYQDVAGLGTSLDLLLELGIERIRDHIRSLHQPVLAWAERSGARVVSPRGAHESGILC
                     VAPDGVQEVHRRLKLSRIVCSLREGAIRFSPHCYNTVDEMERVAHALAGD"
     gene            2503..3750
                     /locus_tag="VF061_03030"
     CDS             2503..3750
                     /locus_tag="VF061_03030"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX6668503.1"
                     /translation="MRVAWLTALFPVLSEVPFLNQLVGLIERGHQVDIYADGPQPGEP
                     FHADVERLDLQSRTRYPLRWPADRLERWHAAARLLAAHRGRERRILLRTLDPTEFWQR
                     AWTLDQLRRTVRFLPVRSYDVCYCAFGMDAPHALRLRRLGVLGGALVVAFRGADTTKY
                     VARRGPRVYRGTFREARLLLPVCDFLGRRLVQLGAPPERVVVHRTGIDLRRWPLRERQ
                     PAPGGGLRLVSVGRLVEKKGIAQALRALRILADRGVSAEYRVFGDGPLRDRLAALAGE
                     LGIAARVTFEGRRGQQAVREGLDRADVLVAPSVTAADGDEEGIPNVLKEAMASGMPVV
                     GTRHAGIPELVEDGVSGYLVPERDEAALADALARLAAAPERWPHMGRAGRARVERDYD
                     IDPLNDRLAGMLETLIPPEARPR"
     gene            3747..>3928
                     /locus_tag="VF061_03035"
     CDS             3747..>3928
                     /locus_tag="VF061_03035"
                     /inference="COORDINATES: protein motif:HMM:NF017669.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase HerA-like domain-containing protein"
                     /protein_id="HEX6668504.1"
                     /translation="MTGFTDMLAAGYGFTQPAITLGAALEGGSLHPEPMVKVPVAMMN
                     RHGLVAGATGTGKTRTL"
BASE COUNT          538 a         1426 c         1398 g          566 t
ORIGIN      
        1 cggcccagct caagcgggcg ctctcaccct atggccgggt gcatgtcttc cactacgcgc
       61 gccggccggt gcgcgaccga ctgccgttcc ggaagacgac gggcggccgg atctttctct
      121 tccaggtcac gccgccgaat cctccgggcg cacgctgatc gcgtaggtcg gacagttgag
      181 cacgtaggcg ccgtccatgg gcgaccacgt ctgcaccgga gtgtgcacct ccgccttccc
      241 ccgcgaatcc agccggaaca ccttcggcgc ctgcaccacg caggcgccgc atcccacgca
      301 gcgcgcgtcg tccaccagca cccgcagtcg ccgggtcggg tgcatcccct gcggcacggc
      361 gtcgagccgg ccgcccaggc tggccagcgt ctgcgagcag gcgcggtagc ccgcctcgag
      421 cagctcctcg ttgcggtcga aggcgaacat cgagatgtgc tcgacgcgcg gctgcaccag
      481 gatgagcggc ggcccctgcc agtcgcggag ctggccctcg atctgggtct gcatcacgat
      541 ctcgaggccg cggctgtagg tcgcggcgaa gccttcggtc tcgtgggacg cgcgcaccac
      601 gctcgtggag gccacgttga cggcgacgat gggaccgctg cccagcgacg ccgcgagtcg
      661 gacaggcaga ttctccacca ccgcgccgtc cacgtacgac cggccattga tgacgcgagg
      721 ggggaagatg ccgggcagtg cgcaggaggc caccaccgca tcggcgaccc gggtgtcgag
      781 caagccggga aggccccaga ggacctggat gccggaatgg aggtcggcgg tgttcaccag
      841 cagccgacgc ggtagttcgc ggaaggtgat gtccccgacc aggcttcgga ccaggaactc
      901 gagcggctct cgccggtaca gtgcgggggc catgaatcgc cggaaggcca cgtcggtgct
      961 ggcgacctgg aagatgtcgc gccggcggac ggcccgcgcg cgctcctcca tctggcggag
     1021 gggaactccg gaggcccagg ccgccccgac cagggagccg atactcgacc ccaccaccag
     1081 gctcgggacg agcccgtgct cctccagcgc gcgcagcacg ccgatgtggg ccagcccctt
     1141 gaggccgccg ccgctgagga ccagggtgaa gggtcggtcc gggttcactc gcttgccccg
     1201 cctgaggtcg agtgcgtaac gtacgcccca ccaaggtgca agaatcatgc gccacacgcc
     1261 gtgagggccg ggggtgcaag ccggtgcgcg gccaggggcg gccgaatgtg cggcaggtca
     1321 cgtcgccggc gtgaaaggtg aaacgtgaac ggttcacgca gttacgacgt gggtgtcctc
     1381 cgggccaccg agtttccgtg gacttccgac acggtctacc tcaacaacgc gagcatcggt
     1441 cccctcccgg agcgcacccg ggtggccctg gatcgcttca accgcgggcg ggccgcgccc
     1501 cacctgctgc ccgaccgcga gctgttcgcc atgctggccg acacccggat gaagctcgcc
     1561 cgcctggtgg gcgcctcggc cgacgagatc gccctcgcct tgaacaccgg tttcgggatc
     1621 agcacggcgg cgcgggcgct gcccctcgag ccgggcgacg tcgtgctggt gagcgacaag
     1681 gagttcccgg ccaacgtcta cccgtggatg cggctgggcg accgcggcgt ccggatggag
     1741 ctggttccga ccaccccgga aggctggccc gacgaggccc ggctcctgga gcgcctccgg
     1801 gatccgcggg tccgggtgct cgccgtatcg ctggtgcaat tcagcagcgg ttacctcgtg
     1861 gatctggagc ggctctccgc cgcgacccgg gagaccgggg cgttcctcgt ggtggacgcc
     1921 atccaggccg tgggccagtt gcccctggat ctctcgcggg tgcaggtgga cgtgctcgcc
     1981 tgcggcgggc agaagtggct cctctcgccc tggggctccg ggttcctcta cgtgcgccgc
     2041 gagctcatcg gccggctcga tcccgcgatc accgggtggc tcgccttcga ggggaccgac
     2101 gatctcagcc gtctcacccg ctacgacgac acgctgcgtt cggatgcccg ccgcttcgag
     2161 ctgatgacgc tcccctacca ggacgtcgcc gggctcggca cctcgctcga cctgctgctc
     2221 gagctcggca tcgagcgcat ccgcgatcac atccggagcc tgcaccagcc ggtgctcgcc
     2281 tgggccgagc ggagcggggc ccgggtggtt tcgcctcgtg gggcacacga gtccgggatc
     2341 ctctgcgtgg cccccgacgg ggtgcaggag gtccaccgcc ggctcaagct gtcgcggatc
     2401 gtctgcagcc tgcgcgaagg cgcgatccga ttcagcccgc actgctacaa caccgtggac
     2461 gagatggagc gggtggcgca cgcgctcgcc ggagactgag gggtgcgggt ggcctggctc
     2521 acggccctgt ttccggtgct ctccgaggtc ccgttcctca accagctcgt cgggctcatc
     2581 gagcgcggcc accaggtgga catctacgcc gacggtccgc agcccggcga gccgtttcat
     2641 gccgacgtcg agcgcctcga cctccaatcg aggacccgct atcccctgcg gtggccggcc
     2701 gaccggctgg aacggtggca cgccgcggcc cggctcctcg cggcgcaccg gggtcgcgag
     2761 cgacggatcc tcctccgcac cctcgacccg acggagttct ggcaacgggc ctggaccctc
     2821 gaccagctgc gtcgcaccgt gcgcttcctg ccggtgcgct cctatgacgt gtgctactgc
     2881 gccttcggga tggatgcgcc ccacgcgctc cgcctccgcc gcctcggcgt gctcggcggg
     2941 gcgctggtcg tagccttccg cggcgccgac acgaccaagt acgttgcccg acggggtccc
     3001 cgggtctaca ggggcacgtt tcgcgaggcg cgcctcctgc tgccggtctg cgacttcctc
     3061 ggccgccgcc tggttcagct cggcgcacct cccgagcggg tcgtggtgca ccgcaccggc
     3121 atcgaccttc gtcgctggcc gctccgggag cggcagccgg cacccggggg cggtctccgg
     3181 ctggtgagcg tgggccggct ggtcgagaag aaggggattg cccaggcgct ccgggcgctc
     3241 cggatcctgg cggaccgcgg ggtgtccgcg gagtatcgcg tgttcggcga cggcccgctg
     3301 cgagaccggc tggcggcgct ggccggggag ctgggcatcg ctgcgcgggt gacgttcgag
     3361 ggccgccggg gacagcaggc ggtgcgcgaa ggtctcgatc gcgccgacgt gctggtggcg
     3421 cccagcgtga cggccgccga cggcgacgag gaggggattc ccaatgtcct caaggaggcc
     3481 atggcctcgg ggatgcccgt cgtcggcacc cggcacgccg gcattccgga gctggtcgag
     3541 gacggcgtct ccggctacct cgtgcccgag cgcgacgagg ccgcgctcgc cgacgccctc
     3601 gcccgccttg cggcggcgcc ggagcgctgg ccccacatgg ggcgcgccgg ccgcgcaagg
     3661 gtcgagcgcg actacgacat cgacccgctc aacgaccggc tcgccgggat gctggagact
     3721 ctgatccctc cggaggcacg accccgatga caggcttcac cgatatgctc gcggccggct
     3781 acggcttcac ccagcccgcc atcaccctcg gcgccgcgct ggagggcggc agcctgcacc
     3841 ccgagccgat ggtcaaggtg ccggtcgcga tgatgaaccg gcacggcctc gtcgccggcg
     3901 ccaccggcac gggcaagacc aggaccct
//
LOCUS       DASUYN010000158         4134 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_493862, whole genome shotgun sequence.
ACCESSION   DASUYN010000158 DASUYN010000000
VERSION     DASUYN010000158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4134)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4134)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4134
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_493862"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..852
                     /locus_tag="VF061_03040"
     CDS             <1..852
                     /locus_tag="VF061_03040"
                     /inference="COORDINATES: protein motif:HMM:TIGR00797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEX6668505.1"
                     /translation="WVLIFGNLGAPAMGVAGSAWATTVSRWLLLLLLLALTWKALRPH
                     LLPLRPEVFQWAPLSRMLRLGVPIGCQYTLEFGAFAFVALMMGWLGTREMAGHQVAIN
                     LASLTFMVPLGVADAASILVGHAVGRGDLPGTRGAARAALLCGIGFMSCTAIAFLTLP
                     GTFARLYTEEPSVLAIAMGLIPLAGVFQVFDGTQTVAGGILRGLGETKVAMLVNLGGY
                     WFFGLPVSYLLGFVLGMGPAGLWYGLVLGLAAVAIVLLTRVRLALARERRRVLIDHPA
                     LEPALEP"
     gene            complement(952..1476)
                     /locus_tag="VF061_03045"
     CDS             complement(952..1476)
                     /locus_tag="VF061_03045"
                     /inference="COORDINATES: protein motif:HMM:NF017758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HEX6668506.1"
                     /translation="MAKLSSLDDLLVHELQDIYHAEGQILKALPKMTKAATNQDLKAA
                     FEEHRVQTEGQVKRLEQVFKLLGHPVKGKKCEGMAGLIEEGKKIMEEDADPAVLDAAL
                     IAAAQKVEHYEIAAYGCLCTYAEMLGFDEAHELLGQNLDEEESTDEKLTALAETVINL
                     EAEEGTESEEEASR"
     gene            1610..2857
                     /locus_tag="VF061_03050"
     CDS             1610..2857
                     /locus_tag="VF061_03050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668507.1"
                     /translation="MQTTLAAIAVITVGYIFAYLLFDRLRDRYGYVGGAEYVVIGFLL
                     GPRVTGLLDAGQVQDLTPIVSLALGWLGMLLGTYFRLPTMALIQGDYLRVAFAEAVAT
                     FGIALVSLFTLFRYLLDTPWPDAAVLSGTLAAVATLSSPVAVDAVVDRFRVRSRVPPV
                     LQLAARIDALVAVVAFGLVLAIFHQGDVAPGVRPPTATEWAVINVAVGVASGVLFHLF
                     LGPRGHLDEGRLFVALAGAIVVASGASYYLNLSPIFTNLVLGFILVNSGGPHRDVTGL
                     LLTTERPVYLALLLFAGAAWSPGSVDLLFLAPLFVLIRVGARFLGGALAGGHVAPPEL
                     RAPGLGRGLLALGGIGVALALNYGQVYPDLHPRLVLTATLLAVLLFEIVASREASAFI
                     LGLGNGTKAEAGEERLEPVPGPG"
     gene            2854..>4134
                     /locus_tag="VF061_03055"
     CDS             2854..>4134
                     /locus_tag="VF061_03055"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEX6668508.1"
                     /translation="MIRRLVVLMLLVGGAVLLEPLRVPTEGVIAPRSLFLFGILLLTA
                     DTFGALAHDLGFPRLVGYLVAGLALGPSVLGIVPPGVLQDLSMMKQLAVGLIALLAGA
                     ELRVKDLVERYRAIAWILALQTAAVLVGLTVVALLLRPWIPFLEGLSAPTLLFVALLF
                     AATLTVNSPMVTLALLTETRADGPLAKTTLGVVLVADVLVILIFTAAFSLAQASLGGA
                     TATAPEILLRLLREVVGSILAGTLIGGVLTLYLRFVRRELVVFVVVVVFATAAAAQAL
                     HFELLLSLLVAGFLVENVAPVRAEPLVDMLHLMAVPVFVVFFAMAGADLRLQTFRDLW
                     LLILVVAVVRVGLVYLGSTAGARVGRAEPAVARYAWTGLVSQAGVALGLATIVADRLP
                     RLGLAMQTVIVGIIAFNETVGPVLFRAGLDRAGEI"
BASE COUNT          449 a         1395 c         1463 g          827 t
ORIGIN      
        1 tgggtcctga tcttcggtaa tctcggcgcg ccggcgatgg gcgttgcggg gtcggcgtgg
       61 gccacgaccg tgagccggtg gctgttgctc ctgctcctgc tcgcgctcac ctggaaggcc
      121 ctgcgaccac acctcctgcc cctgcggccc gaggtcttcc agtgggcgcc gttgagccgg
      181 atgctgaggc tgggggttcc catcggctgc cagtacaccc tggagttcgg tgccttcgcc
      241 ttcgtggccc tcatgatggg atggctcggc acccgcgaga tggccgggca ccaggtcgcc
      301 atcaacctgg cgtcgctgac cttcatggtg ccgctcggtg tggccgacgc cgcctctatc
      361 ctcgtgggtc acgccgtcgg acggggcgac ctgcccggga cccggggcgc cgcccgggcc
      421 gcgctcctct gcggcatcgg tttcatgagc tgcaccgcga tcgcgttcct cacgctgccg
      481 ggaacgttcg cccggctcta caccgaggaa ccgtccgtgc tcgccatcgc gatgggcctc
      541 attccgctgg cgggagtgtt ccaggtgttc gacggcaccc agaccgtcgc cggtggcatc
      601 ctgcgcggat tgggagaaac caaagtggcg atgctggtga acctgggcgg atattggttc
      661 ttcgggctgc cggtgagcta cctgctcggg tttgttctcg ggatgggccc ggccgggctc
      721 tggtacgggc tcgtgctggg actcgccgcc gtggccatcg tcctgctcac ccgggtccgc
      781 cttgccttgg cgcgggagcg gcgccgggtg ctcatcgatc acccggcgct ggagccggcg
      841 ctcgagccct gaacgtagcg atccgcctcg gaccggcagc ggggagatgt ggagtctccg
      901 ctgcttccgg tccgtgggcg gatcgccgtg ggtctgcaag gcggccgggg gttaccggga
      961 ggcctcctcc tccgactcgg taccttcctc ggcctcgagg ttgatcaccg tctccgcgag
     1021 ggcggtgagc ttctcgtcgg tggactcttc ctcgtccagg ttctggccga gcagctcgtg
     1081 cgcttcgtcg aagcccagca tctccgcgta ggtgcagagg cagccgtagg cggcgatctc
     1141 gtagtgctcc accttctgcg cggccgcgat cagtgccgca tcgaggacgg cgggatcggc
     1201 gtcctcctcc atgattttct tgccctcttc gatcagcccg gccatcccct cgcacttctt
     1261 ccccttcacc gggtgaccga gcagcttgaa gacctgctcc agccgcttga cctgaccctc
     1321 ggtctggacc cggtgctcct cgaaggcggc cttgaggtcc tgattggtcg cggccttcgt
     1381 catcttgggg agcgccttga ggatctgacc ttcggcgtga tagatgtcct gcagttcgtg
     1441 gacgagcagg tcgtccagcg aggaaagctt ggccatggca tgctccttcg tagatggcga
     1501 ggtgtcggac cccgttaccc tgaatgctgt cccggcgccg gcgcgtaacc tagggaccgg
     1561 gatacgtccg tgaccgtgtt ctgcgtcacc tgagaatcca agggtaggta tgcagacgac
     1621 actggccgcg atcgcggtca tcacggtggg ctacatcttc gcctatctcc tgttcgatcg
     1681 cctccgcgac cgctacggtt acgtcggcgg cgccgagtac gtggtgatcg ggtttctcct
     1741 ggggccgcgc gtcaccgggc tgctcgacgc cgggcaggtc caggacctca ccccgatcgt
     1801 gagcctggcg ctcggctggc tgggcatgtt gctgggcacc tacttccgct tgccgaccat
     1861 ggccctgatc cagggcgact acctccgtgt cgcgttcgcg gaggccgtgg ccaccttcgg
     1921 gatcgccctg gtgtcgctct tcacgctctt ccggtatctg ctcgacactc cctggcccga
     1981 tgcggcggtg ctctccggca ccctggcggc ggtggcgacc ctgagctcgc cggtggcggt
     2041 ggacgccgtc gtggaccggt tccgggtccg gtcgcgggtg ccgccggtcc tccagcttgc
     2101 cgcccgaatc gacgccctgg tggcggtcgt ggcgttcggg ctggtgctgg ccatcttcca
     2161 ccagggggac gtggctcccg gcgttcggcc acccacggcc accgagtggg cggtgatcaa
     2221 tgtggccgtc ggggtcgcct cgggggtgct ctttcacctg tttctgggcc cccgcgggca
     2281 tctggacgag gggcggctgt tcgtcgccct ggccggcgcc atcgtggtgg ccagcggggc
     2341 gagctactac ctcaacctct cgcccatctt caccaacctg gtgctgggct tcatcttggt
     2401 gaacagcggg gggccccatc gcgacgtcac cggcctgctg ctcaccaccg agcgcccggt
     2461 gtacctcgcc ctgctcctct tcgcgggggc ggcgtggagc ccggggtcgg tggatctgct
     2521 cttcctcgcc cccctcttcg tcctgatccg ggtgggtgcc cgcttcctcg gtggagcctt
     2581 ggccggcggc cacgtcgccc cacccgagct ccgggcgccc ggcctcggcc gcggcctgct
     2641 ggcgctgggc ggcatcggtg tcgcgctcgc gctcaactac gggcaggtgt atccggacct
     2701 ccatccccgc ctggtgctta cggccacgct gctcgcagtg ctcctgttcg agatcgtggc
     2761 cagccgcgag gcgtcggcgt tcatcctggg gctggggaac gggacgaaag cagaggcggg
     2821 agaggaacgg ctggagccgg tgccgggtcc cggatgatcc ggcggctcgt cgtcctgatg
     2881 ctgctggtcg gcggtgccgt cctgctggag cccctgcggg tcccgaccga gggcgtgatc
     2941 gcgccgagat cgctgttcct gttcggcatc ctcctgctca ccgcggacac gttcggcgcc
     3001 ctggcccacg atctcggctt tccgagactg gtggggtatc tggtagccgg actcgcgctg
     3061 ggtccctcgg tgctgggcat cgtccccccg ggagtcctcc aggacctctc catgatgaag
     3121 cagctggccg tcgggctgat cgccctgctg gccggggcgg agcttcgggt caaggatctg
     3181 gtggagcgtt accgggcgat cgcctggatc ctggcgctgc agaccgccgc cgtcctggtc
     3241 gggctcaccg tggtcgcgtt gctgctccgg ccctggatcc cgtttctcga gggcctgagc
     3301 gcgccgacac tgctgttcgt ggccctgctc ttcgcggcca ccctcacggt caattcgccg
     3361 atggtgacac tggcgctgct caccgagacg cgcgcggacg gtcccctggc gaagaccacg
     3421 ctgggcgtcg tcctggtggc ggacgtcctc gtgatcctga tcttcacggc ggccttcagc
     3481 ctggctcaag ccagcctggg cggcgccacg gcgacggcgc cggagattct cctgcggctg
     3541 ctccgcgagg tggtgggctc catcctcgcg ggaaccctga tcggtggggt actgaccctg
     3601 tatctccgct tcgttcggcg ggagctggtg gtctttgtgg tcgtcgtcgt cttcgcgacg
     3661 gcggccgccg cccaggcgct ccacttcgag ctgctgctga gtctcctggt ggccgggttc
     3721 ctggtggaga acgtggcgcc ggtccgggcg gagccgctgg tcgatatgct ccacctgatg
     3781 gcggtgcccg tgttcgtcgt cttcttcgcc atggccgggg ccgatctgcg gctccagacc
     3841 ttccgcgacc tttggttgtt gatcctggtg gtcgcggtgg ttcgggtggg cttggtgtac
     3901 ctggggagca ccgcgggtgc ccgcgtaggg cgggcggagc cggcggtggc ccgctacgcc
     3961 tggaccggac tggtgagcca ggccggcgtg gcgctcggcc tggcgacgat cgtggcggat
     4021 cggctgccca ggctggggct ggcgatgcag acggtgatcg tggggatcat cgcgttcaat
     4081 gagacggtgg ggccggtgct gttccgggcg ggactggatc gggcggggga gatc
//
LOCUS       DASUYN010000159         2849 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1374301, whole genome shotgun sequence.
ACCESSION   DASUYN010000159 DASUYN010000000
VERSION     DASUYN010000159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2849)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2849)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2849
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1374301"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            173..706
                     /locus_tag="VF061_03060"
     CDS             173..706
                     /locus_tag="VF061_03060"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEX6668509.1"
                     /translation="MRDKERKLFDRIESRRRELLAEADRLGAEQLTFRPEPNAWSTLD
                     VLEHLVKVEEAIAERVRVREPRSLREAARAKAALLAMRVVFGLRRRVKVPVQGILPLG
                     GVTLTDLVNRWESAQATLRTKLEGFGPGHWSRPMMRHPLIGLLTPSEGLTFIHWHMAH
                     HRRQIARIRRVAGYPRS"
     gene            723..1946
                     /locus_tag="VF061_03065"
     CDS             723..1946
                     /locus_tag="VF061_03065"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HEX6668510.1"
                     /translation="MTGAPKVGIMLRHVTAPGGVTVFTKRVVRWLLNNPRGVEYHLLY
                     SDASQQEVFAGLPGTHVVLEDKARIRWDQVTAPRYAEQHGLGLLFNCKFSVPLAARVP
                     TLIVIPGREQLAMAHVFPWYNRWYNQLLVPAFCRSAGALITHTEIGREDCIMMGARPE
                     SITVIPHGVDPYLRPAPEEAKRALKARLGLTRPYILFLGGITPLKNIGNLLRGFAQLV
                     ERHDLDLVLAGFKRWSFERELAPIAELGLQDRVKYVGYVPDEDLAALYSAAECLALPS
                     WYEGFGIPIVEAMSCGCPVVTSSGRHAAPEVAGGAAVLVDPADPAAIAAGLGRVLDDP
                     ALRAELVAKGLVRGPQFDWDVTGRRTAEVIESLVARPAMREGAWAGVKRGMVRGVASA
                     SAVVTERIAGGFYKK"
     gene            complement(2023..>2849)
                     /locus_tag="VF061_03070"
     CDS             complement(2023..>2849)
                     /locus_tag="VF061_03070"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEX6668511.1"
                     /translation="NYRSERLLAQAPDGMRVPVSLVYRTPREPGSPRPLLLNGYGAYG
                     ISYDPSFSNSALSLLDRGWIVAIAHIRGGEEMGRPWYENGKLMHKRNTFTDFIAAAEH
                     LVAEGYTAPDRLAINGGSAGGLLMGVVTNLRPELFRAVVAEVPFVDVVNTMLDASLPL
                     TVIEYDEWGNPNDPSYYEYIRSYSPYDNVTSKDYPHILVTAGLNDPRVAYWEPAKWTA
                     RLRARKTDRNRLLLRTNMGAGHGGASGRYDHLREVAFKYAFLIDVVGDGVRAPLSP"
BASE COUNT          407 a          955 c         1050 g          437 t
ORIGIN      
        1 gggaaggcgg gaaggcggta gggcggtcgg gcggtggggc gggcgagtgt cagcctgagc
       61 ggagcgaagg agccgccgcc gggtcatgcc cccttcgctt tgctcagggt gacactcaca
      121 ttccgcctta ccgccttacc gccttaccgc cttaccgcct taggttcctg ccatgcgcga
      181 caaggaacgc aagctcttcg accggatcga gtcccgccgc cgcgagctgc tggcggaggc
      241 ggaccggctc ggtgcggagc agctgacctt tcgtccggag ccgaacgcct ggtccaccct
      301 cgatgtgctc gagcacctgg tgaaggtgga ggaagcaatc gcggagcggg tccgggtgcg
      361 ggagccgcgc agcctgcgcg aggcggcgag ggcgaaggcg gcgctcctcg cgatgcgcgt
      421 cgtcttcggg ctgcggcggc gagtcaaggt gccggtgcag ggcatcctgc cgctaggcgg
      481 cgtcaccctc accgacctgg tgaatcgctg ggagtcggcc caggccaccc tgcggacgaa
      541 gctggagggg ttcgggccgg ggcactggtc gcggccgatg atgcggcatc cgctgatcgg
      601 cctcctcacg ccgtccgagg ggctcacctt catccactgg cacatggcac accaccggcg
      661 gcagatcgcg cgcatccggc gggtggcggg gtatccgaga tcgtgattcg gcagggggag
      721 ggatgacggg ggcaccgaag gtcgggatca tgctgcgcca cgtaacggcg ccgggcggag
      781 tgacggtgtt caccaagcgg gtggtgcgct ggctcctcaa caacccgcgg ggggtggaat
      841 accacctgct ctacagcgac gcgtcgcagc aggaggtgtt cgccggcctg cccgggacgc
      901 acgtggtgct ggaggacaag gcgcgcatcc gctgggacca ggtcaccgcc ccgcgctacg
      961 ccgagcagca cggtctcggg ctgttgttca actgcaagtt ctcggttccg ctggccgcca
     1021 gggtgccgac cctcatcgtg atcccgggcc gggagcagct cgcgatggcg cacgtctttc
     1081 cctggtacaa ccgctggtac aaccagctcc tcgtccccgc cttctgccgc agcgccggcg
     1141 cgctcatcac ccacaccgag atcggccgcg aggactgcat catgatgggc gcgcggccgg
     1201 agagcatcac cgtcatcccc cacggcgtgg acccctacct ccgtcccgcg cccgaggagg
     1261 cgaagcgcgc gctcaaggcc cggctcggcc tcacccggcc ctacatcctg ttcctcggcg
     1321 ggatcacgcc gctcaagaac atcggcaacc tgctccgggg gttcgcccag ctggtggagc
     1381 gtcacgacct ggacctggtg ctggccggct tcaagcgctg gagcttcgag cgcgagctgg
     1441 cgcccatcgc ggagctgggg ctgcaggacc gggtgaagta cgtggggtac gttccggacg
     1501 aggacctcgc ggcgctctat tccgccgcgg aatgcctcgc gctgccgtcg tggtacgagg
     1561 gcttcggcat ccccatcgtc gaggcgatga gctgcggctg cccggtggtg acctccagcg
     1621 ggcggcacgc ggcgccggag gtggccggcg gcgcggcggt cctggtggat cccgcggatc
     1681 ccgccgccat cgcggccgga ctcggccggg tgctggacga tccggcgctc cgtgcggagc
     1741 tggtggcgaa ggggctggtg cgggggccgc agttcgactg ggacgtgacc gggcggcgga
     1801 cggcggaggt gatcgagtcg ctggtggcgc ggccggcgat gcgggaaggc gcgtgggcgg
     1861 gcgtgaagcg ggggatggtg cgcggggtgg cgtcggcgag cgcggtggtg accgagcgga
     1921 tcgcgggagg gttctacaag aagtgacggg cgggcgaagc agcgcctgtc accctgaacg
     1981 gagtgaaggg ggccatatcg agtatggtcc ccttcgctgc gctcagggtg acagcggtgc
     2041 ccgcacgccg tcccccacga cgtcgatcag aaacgcatac ttgaacgcca cctcccgcag
     2101 gtggtcgtac cgccccgacg ccccgccgtg tcccgccccc atgttggtcc gcagcagcag
     2161 ccggttccgg tccgtcttcc tcgcccggag ccgtgcggtc cacttggccg gctcccagta
     2221 ggcgacccgc gggtcgttga gccccgccgt caccaggatg tgggggtagt ccttcgaggt
     2281 cacgttgtca tagggggagt aggagcggat gtactcgtag tacgacggat cgttcggatt
     2341 gccccactcg tcgtactcga tcaccgtgag cggcaggctg gcgtcgagca tggtgttcac
     2401 cacgtccacg aacggcacct ccgccaccac cgcacggaac agctccggcc gcaggttggt
     2461 gaccacaccc atcagcagcc cgcccgcgct gccgccgttg atcgccaggc ggtcgggggc
     2521 ggtgtagccc tccgccacca ggtgctccgc cgcggcgatg aagtcggtga aggtgttccg
     2581 cttgtgcatc agcttgccgt tctcgtacca gggccggccc atctcctcgc cgccgcggat
     2641 gtgggcgatg gccacgatcc acccccggtc gagcaggctg agcgcgctgt tgctgaacga
     2701 cgggtcgtag ctgatcccgt aggcaccgta gccgttgagc aggagcggac ggggggagcc
     2761 gggctcgcgc ggcgtccgat acaccagcga caccggcacc cgcatgccgt cgggcgcctg
     2821 ggccagcagc cgctcgctcc ggtagttcg
//
LOCUS       DASUYN010000160         4197 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1374494, whole genome shotgun sequence.
ACCESSION   DASUYN010000160 DASUYN010000000
VERSION     DASUYN010000160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4197)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4197)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4197
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1374494"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..223
                     /locus_tag="VF061_03075"
     CDS             <1..223
                     /locus_tag="VF061_03075"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX6668512.1"
                     /translation="LPGGQAELLYGEFGDGILDLQHTEVPPAGRGKGVSDALVRAALG
                     FAREQGARVMATCPYVQAWLRRHPGERPG"
     gene            complement(220..603)
                     /locus_tag="VF061_03080"
     CDS             complement(220..603)
                     /locus_tag="VF061_03080"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEX6668513.1"
                     /translation="MPVRAYDPAGVPAQVGNYTQGLEVPAGARLLFVSGQIPVRPDGT
                     VPDGFEAQCHAVWDNVLAVLASAGMGPEHLVKVTTYLTSRDQAEINGQVRRERLGAVR
                     PALTVVIVQTFAPEWLLEIEAVAAA"
     gene            complement(657..947)
                     /locus_tag="VF061_03085"
     CDS             complement(657..947)
                     /locus_tag="VF061_03085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668514.1"
                     /translation="MDPQGFAVFIPILALSIPVAAVIFNGLQKVARLRIEEAKVKAGL
                     LDGQSAADVTALREEMGEVRRELSEVQERLDFAERLLTSGRAPEHSERREGR"
     gene            complement(975..1337)
                     /locus_tag="VF061_03090"
     CDS             complement(975..1337)
                     /locus_tag="VF061_03090"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX6668515.1"
                     /translation="MVTSIDLAEKLTRFDDLWNPRIVADLNDSHVKLAKVLGEFVWHQ
                     HAEEDELFLVLRGTLTIELRDGAVTLGPGQMAVIPKGVEHRPVATEEVHLMLIEPKGI
                     RHTGDVESELTVHEYTRI"
     gene            complement(1471..1788)
                     /locus_tag="VF061_03095"
     CDS             complement(1471..1788)
                     /locus_tag="VF061_03095"
                     /inference="COORDINATES: protein motif:HMM:NF025479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4286 family protein"
                     /protein_id="HEX6668516.1"
                     /translation="MITYEVTVEIEERLAGAYERYMREAHIPAVLATGCFGGAIFARS
                     SPGRYRTGYLARSQGDLDRYLERHTAALREDFAAHFPDGVSVSREVWLTVERWEGTAA
                     APA"
     gene            complement(1820..2518)
                     /locus_tag="VF061_03100"
     CDS             complement(1820..2518)
                     /locus_tag="VF061_03100"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HEX6668517.1"
                     /translation="MIHARIRTASLSLAAALVHGCGASDRQAPDPSTLELTKPDGASG
                     DGQVGVAGERLPDSLRVLVTREGDPVEGVSVLWFTTEGSVDPAEARTGPDGMAATTWT
                     TMALFAEQFATARVEGGPTTGFTAIATPDPDAPNTILVLSEGGNRFQPAAFSVPVGGT
                     VNWFWAPGSSGHNIVPDDGLSPPHSGAPADWPKWHVFGFTSPGSYGYHCSIHGAPGGI
                     GMSGTITVTQSGPD"
     gene            complement(2561..3325)
                     /locus_tag="VF061_03105"
     CDS             complement(2561..3325)
                     /locus_tag="VF061_03105"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX6668518.1"
                     /translation="MPIHPGAMSGADQGSGAPRLYGELASWWPLLSPPEEYEEEASDL
                     LARLDPGIASEGATLLELGSGGGSFASHLKGRFRLTLTDISPAMLAVSRTVNPECEHL
                     VGDMRSLRLDRRFDVVLIHDAIAYATSPAAVRDTLRTAAHHCRPGGLVAVLPDYVHET
                     FEPGTDRGGHDGAGGRGLRYLEWTWDPDPEDDTYVVDYAFLLRDGDGSVRVEHDRHIE
                     GLFSRAQWLEWFAAAGLPARCETDPWRREVFIGHRR"
     gene            complement(3502..>4197)
                     /locus_tag="VF061_03110"
     CDS             complement(3502..>4197)
                     /locus_tag="VF061_03110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6596 domain-containing protein"
                     /protein_id="HEX6668519.1"
                     /translation="LEVVYLIFNEGYSATAGEDWVRPALCEEALRLGRVLAELAPEER
                     EVHGLVALMEIQASRLRARVGPSGEPVLLLAQDRSRWDQLLIRRGLAALERAEAIPGG
                     PGPYGLQAAIAACHARARTPEETDWQRIAALYAALAELTPSPIVELNRGVAVAMAEGP
                     AAGLAIIDPLREEPSLRAYHLLPSVRADLLVKLGRLEEARSEFERAASLTRNARERAL
                     LLDRAAANAPVHR"
BASE COUNT          594 a         1540 c         1450 g          613 t
ORIGIN      
        1 ccttcccgga ggccaggccg agctgctgta cggcgagttc ggggatggca tcctggacct
       61 ccagcacacc gaggtgccac ccgcaggccg gggcaagggc gtgagcgatg cgctggtgcg
      121 ggccgcgctc ggcttcgccc gagaacaggg ggcgcgggtc atggccacat gcccctatgt
      181 ccaggcctgg ctgcgccggc accccgggga gcgtcccggc taggccgccg ccaccgcctc
      241 gatctccagc agccactcgg gcgcgaaggt ctgcacgatc accaccgtaa gcgcaggccg
      301 caccgcaccc aggcgctcgc gccggacctg tccgttgatc tccgcctggt cccgactcgt
      361 caggtaagtc gtgaccttca cgaggtgctc cggccccatt cccgcgctgg cgagcacggc
      421 gaggacattg tcccacaccg cgtggcactg ggcctcgaag ccgtccggca cggtcccgtc
      481 gggccgaacc gggatctggc cgctcacgaa caggaggcgc gcgcccgccg ggacttccag
      541 cccctgggtg tagttgccga cctgcgccgg caccccggcg ggatcgtagg cgcggaccgg
      601 caccgggcct cagctctcgc cggtgtccag ctctcgccgc tcctcgcgac aagacgtcat
      661 cgcccctccc ggcgctcact gtgctccggc gcgcggccgc tggtgagcag gcgctcggcg
      721 aagtcgagcc gctcctgcac ctccgagagc tcccgccgca cctcacccat ctcttcccgc
      781 agcgcggtca cgtccgcggc cgattggcca tccagcaggc cggccttcac cttcgcctcc
      841 tcgatgcgga gacgcgccac cttctgcagg ccgttgaaga tgaccgccgc caccgggatg
      901 gacagggcga ggatcgggat gaagaccgcg aatccctggg ggtccatcgt tcctccttcg
      961 gctccgccct cgcgtcagat gcgggtgtat tcgtgcacgg tcagctcgct ctcgacgtcc
     1021 ccggtgtgcc ggatgccctt gggctcgatc agcatgaggt gcacttcctc ggtggccacc
     1081 ggacggtgct cgacaccctt ggggatcacg gccatctggc ccggcccgag cgtcaccgcg
     1141 ccgtcccgga gctcgatcgt gagcgtgccc cggaggacca ggaacagctc gtcctcctcg
     1201 gcgtgctggt gccacacgaa ctcgcccagg accttggcca gcttgacgtg gctgtcgttg
     1261 agatccgcga cgatcctggg gttccaaagg tcgtcgaacc gggtgagctt ctcggcgaga
     1321 tcgatgctgg tgaccacggc ccgctcctgg aagggtggac gtcggccggg cggccggcgg
     1381 aacacatgcc caaatgtatc ccgacttccc cggaggccgg agtggtcttc tccgtcggtt
     1441 cgagggcacg cgcgaaagtc tgcgggcagc tcaggccggg gcggcggccg tgccttccca
     1501 gcgctccacg gtgagccaca cctcgcgcga cacggagacg ccatccggga agtgagcggc
     1561 gaagtcctcc cggagcgccg ccgtgtggcg ctcgaggtag cggtcgaggt cgccctgact
     1621 ccgggcgagg tagccggtcc ggtaccgccc cggcgacgag cgggcgaaga tcgctccccc
     1681 gaagcacccg gtcgccagca ccgccgggat gtgggcctct cgcatgtagc gctcgtacgc
     1741 tccggccagc cgctcctcga tttccaccgt gacctcgtag gtgatcatgc tcgggtctcc
     1801 cgccctcttt cgggccgcgt cagtcgggcc cggattgggt caccgtgatg gtccccgaca
     1861 tcccgatgcc gcccggggca ccgtgaatcg agcagtgata cccatagctg ccggggctgg
     1921 tgaagccgaa cacgtgccac ttcggccagt cggccggcgc gccggagtgc ggaggtgaca
     1981 acccgtcgtc gggcacgatg ttgtggccgc tgctgccggg ggcccagaac cagttgaccg
     2041 tccccccgac cggcacggaa aaggcggcgg gctggaaccg gtttccgccc tcgctcagca
     2101 ccaggatcgt gttcggcgca tcggggtcgg gcgtcgcgat cgcggtgaag ccggtggtcg
     2161 gtcccccttc cacccgggcc gtcgcgaact gctccgcgaa gagcgccatc gtggtccagg
     2221 tggtcgcggc catgccgtcg ggtccggtgc gcgcctcggc cggatccacc gatccttcgg
     2281 tggtgaacca gaggaccgag accccctcga ccggatcccc ctcgcgtgtg accagcaccc
     2341 gcaggctgtc cggcagccgc tcccccgcga cgccgacctg tccgtcgcca ctggcgccgt
     2401 cgggcttggt cagctccagg gtcgagggat cgggggcctg ccggtcggag gcgccgcatc
     2461 cgtgcacgag cgccgccgcg aggctcaggc tggccgtgcg aattcgagcg tggatcatga
     2521 cgctggagac gccgcccggc ctcgggcttg gacggctccg tcaacgccgg tgaccgatga
     2581 acacttccct cctccaggga tcggtctcgc aacgggcggg cagacccgcg gcggcgaacc
     2641 actccagcca ttgtgcccgc gagaacagtc cctcgatgtg ccggtcgtgc tcgacccgta
     2701 cgctgccgtc gccgtcccgc aggaggaagg cgtagtccac gacgtacgtg tcgtcctcgg
     2761 ggtccggatc ccaggtccac tccagatagc gcagccccct cccgcccgcc ccatcgtgcc
     2821 cgccacgatc cgtccccggc tcgaaggtct catggacgta gtccggcagc acggcgacga
     2881 ggccgccggg ccggcagtga tgggccgcgg tgcgcagggt gtcgcgcacc gcggcggggc
     2941 tcgtggcgta ggcgatcgcg tcatggatca ggaccacgtc gaaccggcga tcgagtcgca
     3001 gggaccgcat gtcgcccacg aggtgctcgc actcggggtt caccgtccgg ctcaccgcga
     3061 gcatcgcggg cgagatgtcg gtgagggtga ggcggaagcg gcccttcaga tgagaggcga
     3121 agctgccgcc gcccgagccg agctcgagca gggtggctcc ttcgctcgcg atcccggggt
     3181 cgagtcgggc gaggagatcg ctggcctcct cctcgtactc ctcgggcggc gacaggagcg
     3241 gccaccacga ggccagctcg ccgtacaggc ggggagcgcc ggagccctgg tccgccccgc
     3301 tcatggcgcc cgggtgaatg ggcacgtcga agcggccacg cccgttgccc gcggcccagt
     3361 agatgctccc actcgccgga gccccgatcc ttgagtcgga ccgtcaccgc gagcacgtcg
     3421 cccgaggggg gctgggtgaa ctcgtccatg ttgccgaggc cgccgaagtc ttcccaccgt
     3481 ctcctccggg cgtgctcgga ctcagcgatg aaccggtgcg ttcgccgccg ctcgatcgag
     3541 aagcagcgca cgctcgcggg cgttccgggt gagcgacgcc gcgcgctcga actccgaccg
     3601 ggcctcctcg agccgcccca gcttgaccag cagatcggcc cgcacgctcg gcaggaggtg
     3661 ataggcacgg agcgacggtt cctcccggag cggatcgatg atcgccagcc cggcggcagg
     3721 cccctcggcc atcgcgacgg cgacgccccg gttcaactcg acgatggggg acggggtgag
     3781 ctcggccagc gccgcgtaca gcgccgcgat gcgctgccag tcggtttcct cgggcgttcg
     3841 tgcacgggcg tggcaggcgg cgatcgccgc ctggaggccg tagggcccgg gtccgccggg
     3901 gatcgcctcg gcccgctcca gcgcggccag acctcgccgg atgaggagct ggtcccagcg
     3961 actgcgatcc tgcgccaaca gcagcacagg ctcacccgac gggccgacgc gggctcgcag
     4021 acgggaggcc tggatctcca tcagcgccac cagcccatgg acctcccgct cttccggagc
     4081 cagctccgcg agcacgcggc cgagacgcag cgcctcctca cagagcgcgg ggcgcaccca
     4141 atcctcgccc gcggtggcgg aatagccctc gttgaagatc aggtagacga cttccag
//
LOCUS       DASUYN010000161         3515 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1595926, whole genome shotgun sequence.
ACCESSION   DASUYN010000161 DASUYN010000000
VERSION     DASUYN010000161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3515)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3515)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3515
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1595926"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            189..1304
                     /locus_tag="VF061_03115"
     CDS             189..1304
                     /locus_tag="VF061_03115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668520.1"
                     /translation="MSKQQWVSRYTGIALSVLLAAGCGDAGKDEAESAPAASAPAKAA
                     PVRTASAPADACGWIPAAEVAAIVGPLEGAPVVVRSLERPDPDASGAVCRYGLATKPR
                     VGRGAVLLQVDLSGGIIEERVSGSMTEEFRQIIQAGTSAAGSPAPRAAPPPPGWDRVG
                     KHWIGFNTFFGRIGHVAVSAMALTPEVPSEKTAALATRVRDALPDLPFRLPRDPQLEA
                     FARAAGQPLDAEPSGPDPCALLSAEQAEQVLGKLVVPPYRSAGDSPLAVRNGTSCSYF
                     TAGHRALTIYPHWDTGKMIFGMAKGVGGVVGSVAPDDTAAAADTLEGPWEEAAANGTT
                     GQLYFLKGDRMLEVNYVTSSTDRAGAVRLARSAVEKL"
     gene            1301..2446
                     /locus_tag="VF061_03120"
     CDS             1301..2446
                     /locus_tag="VF061_03120"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEX6668521.1"
                     /translation="MTRTGLAGVVILCTVGAPAAWAQGHAVPLPLPAGAVLVQTLSFT
                     GGERESFMSLDEVSDKGSRYGWGLREVKESGDTIQARYGFLEGAPDILTATRLWFYHS
                     VEGPGEHPGYTMMAISRATYRRLLATRSDTFQVMTLESPGGAAPAAFGWLGGRHAAPV
                     RYRGTISLVSSAPAGFPLLVNGQRVEVPALHLRGKLAARGRGWTPELWVLADTTYPLL
                     LKWVGAADAPENVLQTVRIDLPVAEGGKGERGLNGGLMSLEGALASDCRVELPGIYFA
                     FNSAELEPASDPAIAALADVLAGHPDWTGTIEGHTDSVGTAAANLTLSERRAAAVRTR
                     LVGAQRVDPARLATKGFGSSKPREPNATIEGRARNRRVELVRSCPGR"
     gene            2570..>3515
                     /locus_tag="VF061_03125"
     CDS             2570..>3515
                     /locus_tag="VF061_03125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668522.1"
                     /translation="MPRRRRRVSRLSLFYFVATLGLLVGGSVSLDRRGEVTTARVASK
                     YEEITVRQVPAGGWIRWYRVGVEFPTRDAGLGMATVTLPQARYDALHPGDSIQVRYLP
                     FFPLLARAADRSTGQAALDVARHFANDPWLLPFLVWLLGGFVALWIASRVATVAIVVA
                     GLAWMALAFPVEFPAPRPLPPAPLEATARVTAVTLITKAPARSTARRSRVGRGTSESV
                     RRLAMPYEVVQLRFAPPGLPDSVVAVDAVDSASVAGLTAGAIVPIAYDPRSPREARMT
                     LGSRTYRDRNRYHFLVPMMGLGLLGMLGAWGWRHGRVRR"
BASE COUNT          476 a         1235 c         1279 g          525 t
ORIGIN      
        1 catggatccc tgcgtcttcg ctcaccgacc gtccctggcg ctcgctccag gcgagccgcg
       61 agtggagctg gtgcgacggt gagcgcgggc ccggcaggcc gtgaggcagg atcgcggggc
      121 acgggcgtta cctcccgaga acaggctcga cgacccgaag cgccgactca cctgtgcgga
      181 ggcatacgat gtcgaaacag cagtgggttt cccggtacac cggaatcgcg ctcagcgttc
      241 tcctggccgc gggatgcggg gatgctggaa aggatgaggc ggagtcggcg ccggcggcat
      301 cggccccggc caaggcggcg ccggtgcgca ccgcctccgc gcccgccgat gcctgcggct
      361 ggatcccggc ggcggaagtc gccgcgatcg tcgggccgct cgagggcgcc cccgtggtcg
      421 tccggtcgct ggagcggccg gacccggacg cgagcggcgc cgtgtgccgg tacgggctcg
      481 cgaccaagcc ccgggtgggc cgtggagcgg tcttgcttca ggtggacctc tccggtggca
      541 tcatcgaaga gcgcgtcagc ggaagcatga cggaagagtt ccggcaaatc atccaggccg
      601 gcacgagcgc cgcgggcagc cctgcgccgc gagcggctcc tccgcccccg ggctgggacc
      661 gggtgggcaa gcactggatc gggttcaaca cgttcttcgg gcggatcggg catgttgccg
      721 tctcggcgat ggcgctcaca ccagaggtcc cgtcggaaaa gacggccgcg ctggccaccc
      781 gggttcgcga cgcgcttccc gatctcccgt tccggctgcc gcgggatccg cagctcgagg
      841 ccttcgcccg tgcggccggt cagccgctcg acgccgagcc ctcagggccc gatccctgcg
      901 cgctgctttc ggccgagcag gccgagcagg tgctcggcaa gctggtggtg ccgccgtatc
      961 ggtcggccgg tgactcacca ctcgccgtaa ggaacggcac gagctgcagc tacttcaccg
     1021 cggggcaccg cgcactcacc atctaccccc actgggacac ggggaagatg atcttcggga
     1081 tggcgaaggg cgtcggtggc gtcgtcggca gcgtggcacc ggacgacacg gcggccgcgg
     1141 ccgacacgct ggaaggaccg tgggaggagg cggccgcgaa cggcacgacc gggcagctct
     1201 acttcctcaa gggcgaccgg atgctcgagg tgaactacgt cacgagctcg accgaccgcg
     1261 caggcgcagt ccgcctcgcg cggagcgcgg tggagaagct gtgacccgga ctgggctggc
     1321 tggcgtagtg atcctctgca ccgtcggtgc accggcggcg tgggcccagg gccacgcggt
     1381 cccgcttccc ctccccgccg gcgccgtcct ggtccagacg ctgagcttca cgggtggcga
     1441 gcgggaatcg ttcatgtcgc tcgacgaggt gtcggacaag gggtcccggt acgggtgggg
     1501 gctccgcgaa gtgaaggagt ccggggacac gattcaggcg cggtacggat tcctggaggg
     1561 cgcaccggac atcctcaccg cgacccgtct ctggttctac cactcggtgg agggcccggg
     1621 cgagcacccc ggctacacca tgatggccat ctcgcgggcc acctatcgcc gactccttgc
     1681 cacccgttcc gacacgttcc aggtgatgac cctggaatcg ccaggcggtg ccgcgcccgc
     1741 ggcgttcggc tggttaggag ggcggcacgc cgcaccggtc cggtatcgcg gcacgatctc
     1801 gctcgtctcg tccgcgccgg ccggttttcc gctgctggtg aacgggcagc gggtcgaggt
     1861 gcccgcactc caccttcggg gcaagctcgc cgcgcggggt cgaggctgga ctcctgagct
     1921 ctgggtgctc gccgatacga cctaccccct gctgctcaag tgggtcggcg ccgcggacgc
     1981 gccggagaac gtgctgcaga cggtgcgcat cgacctgccg gtggccgagg gcgggaaggg
     2041 cgagcgcggt ctgaatgggg gcctgatgtc gctggaaggc gcgctggcgt ccgattgccg
     2101 cgtcgagctc cccggcatct acttcgcctt caacagcgcg gagctcgagc ccgcgtcgga
     2161 ccccgcgatc gccgcgctgg ccgacgtgct ggcaggccat cccgactgga ccggcacgat
     2221 cgaggggcac acggacagcg tgggcaccgc ggcggccaat ctgacgctct ccgagcgccg
     2281 tgccgccgcg gtgcggaccc gattggtcgg tgcgcagcgg gtggatccgg cgcggctcgc
     2341 caccaagggc ttcggcagct ccaagccccg cgagccgaac gccacgatcg agggccgtgc
     2401 gcgcaatcgc cgggtcgagc tggtgcgctc ctgccccggt cgctgacagg atcgggagga
     2461 ggggagactg aaggatcctg aggcaccggg cggggtcctc gtgcgttcca gtcatcggtg
     2521 cctgccagtc caggcgccga ccgcggcttc ctttcaccac aggtgagcga tgccgagacg
     2581 gcgccgccgt gtcagccgcc tgagcctctt ctacttcgtg gccacgctgg ggctcctcgt
     2641 cggcggttcc gtgtcgctcg accgccgggg tgaggtgaca acggcccggg tggcgtcgaa
     2701 gtacgaagaa atcaccgtgc ggcaggtgcc ggcgggcgga tggatccgct ggtatcgcgt
     2761 cggcgtcgag ttccccaccc gcgacgcggg cctcggcatg gccaccgtga ccctccccca
     2821 ggcacgctac gatgcgctcc acccgggcga ctccatccag gtccggtacc tgcccttctt
     2881 cccgcttctc gcccgggcgg ccgaccgctc caccggacag gcggccctcg acgtcgcgag
     2941 acacttcgcg aacgacccgt ggctgctgcc gttcctggtc tggctgctcg gaggtttcgt
     3001 cgcgctgtgg atcgcgtcgc gcgtggcgac tgtcgcgatc gtcgtcgcgg ggctcgcctg
     3061 gatggcgctc gcgttcccgg tggagtttcc cgcccctcga ccgctgccgc ctgctccgct
     3121 cgaggccacc gcgcgggtca ctgcggtcac cctgatcacg aaggcaccgg cgcgcagcac
     3181 agcccgccgg tcgcgggtcg gtcgaggcac gtccgaatcg gtccgccggc tggcgatgcc
     3241 gtacgaggtc gtccagctgc gattcgctcc gccgggcctc cccgactcgg tcgtcgcggt
     3301 cgacgcggtc gattcggcga gcgtcgcagg gctcaccgcg ggagccatcg tgccgatcgc
     3361 gtacgacccg agatcgccgc gggaagcccg aatgaccctc ggcagccgaa cctaccggga
     3421 ccgcaaccga taccacttcc tcgtgccgat gatggggctc ggactcctgg ggatgctcgg
     3481 cgcctgggga tggcgacatg gccgggtgcg gcggg
//
LOCUS       DASUYN010000162         3497 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1375331, whole genome shotgun sequence.
ACCESSION   DASUYN010000162 DASUYN010000000
VERSION     DASUYN010000162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3497)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3497)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3497
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1375331"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1111
                     /locus_tag="VF061_03130"
     CDS             <1..1111
                     /locus_tag="VF061_03130"
                     /inference="COORDINATES: protein motif:HMM:NF012686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668523.1"
                     /translation="TGQAWLPLSTLMVFLAVQWWAAWYPGAEPGGGGYVVQRILSAKD
                     ERHGLLATLWFNIAHYALRPWPWILVGFVGALRYPDLANPEEGYVRVMVDVLPSPFKG
                     LMLAAFAAAYMSTISTHLNWGASYLVNDVYLRFIRPGAGPRGQVMASRAATVLLMVLA
                     LVVMAFLGSVEAGWKLLLALGAGTGLVLILRWYWWRVNAWSEISAMAASFVTSIALQA
                     TGLNLGDTASVDYALTMLITVAVTTVVWLTVTLLTPPESEATLERFYRRVRPGGAGWS
                     AVSERLGYGREPIPGGALSWANWVAGVIAVYAAVFAVGAFLTGWPGRGLVYSLVAAGA
                     FSLIYRNLRADPTLDASVDSGDSAPLGLRPDRTGS"
     gene            1142..1510
                     /locus_tag="VF061_03135"
     CDS             1142..1510
                     /locus_tag="VF061_03135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly accessory protein"
                     /protein_id="HEX6668524.1"
                     /translation="MSGTEQQAPAGGFVLTLTGRAAEEVRKFITQEQVPADTAGLRVS
                     VLPGGCSGFKYSLNVEERPLDDDLVHELSGVRVFVDGFSAQYLTGVTIDYMSSMQGSG
                     FTFSNPNATGGCGCGSSFTA"
     gene            1701..3134
                     /locus_tag="VF061_03140"
     CDS             1701..3134
                     /locus_tag="VF061_03140"
                     /inference="COORDINATES: protein motif:HMM:TIGR00813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:solute symporter"
                     /protein_id="HEX6668525.1"
                     /translation="MGVGLWVTRKQGTAGDYFLGARELPAWAVLLSIVATETSALTVI
                     SVPGVGARGSLVFLQLTFGYFLGRAAVAYWLLPGYFRGEQETAYARLETRFGAGTRRL
                     VSVVFLLTRFLGDGVRIFAGSIPLALITGWSVPFSIVVMGLVTLAYTWFGGLKAVVWA
                     DVVQLVVYLAGGVAALFIAWDLAGGAFASLSAAQEAGKLRVIDTAIDFTETYTLLGGL
                     VGGALLSAASHGTDHLIVQRLLATRSLADARVALVGSGVVVILQFLLFLLVGIAIWSA
                     GLAPEGMPADMIFPRFIIERLPAGIAGLVVAGILAAAMSTISSSINALASSMTHDIYA
                     SWTGRRDPTHLFRVGRAFSAIWGLALIGGALMFHAYASGSDTPVVVLALSIASVTYGA
                     LLGTYLLAARWPRATGRDVVGAVGVTVAVMLLVVFARRLAADGVAWLEPVGRLAWPWY
                     VPLGTSLAFGTGVALSYLPARGRRGMS"
     gene            3131..>3497
                     /locus_tag="VF061_03145"
     CDS             3131..>3497
                     /locus_tag="VF061_03145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668526.1"
                     /translation="MTVLIGADVGGSKTAVGVSEGANVLARADGPGAAVRPSRALASA
                     GMIAEVVRRALANLGRLSGDVLLVGAAGAGRDPERSELAKALRAENLAARVEVTTDIE
                     LALAGAFESGPGIVVSAGTG"
BASE COUNT          407 a         1198 c         1262 g          630 t
ORIGIN      
        1 gaccggccag gcctggcttc ccctttccac cctgatggtg tttctggcgg tgcagtggtg
       61 ggcggcctgg tatcccggcg cggagccggg cggcggcggg tacgtggtcc agcgcatcct
      121 ctccgccaag gacgagcgcc acgggctgct ggccacgctc tggttcaaca tcgcccacta
      181 cgccctccgc ccgtggccct ggatcctggt cggcttcgtt ggggcgctgc ggtatcccga
      241 tctcgccaac cccgaggagg ggtacgtccg ggtcatggtg gacgtgctgc cctcgccgtt
      301 caagggtctc atgctcgcgg cgttcgcggc ggcgtacatg agcaccatca gcacccacct
      361 caactggggc gcgtcgtacc tggtgaacga cgtctacctg cgcttcatcc gcccgggggc
      421 cggcccccgg ggccaggtca tggcgtcccg cgccgcgaca gtcctcctga tggtcctggc
      481 gctggtggtc atggcgttcc tcggcagcgt ggaggcgggg tggaagctgc tcctcgccct
      541 cggcgccgga accggactgg tgctgatcct gcgctggtac tggtggcggg tgaacgcctg
      601 gtcggagatc agcgccatgg ccgcgtcgtt cgtcacctcg atcgcgctcc aggcgacggg
      661 tctcaacctg ggcgataccg cctcggtgga ctacgccctg acgatgctca tcacggtcgc
      721 ggtcacgaca gtcgtctggc tgaccgtcac cctgctcacg cccccggaat ccgaagcgac
      781 cctggagcgc ttctaccgcc gggtgcggcc ggggggcgcc ggctggtctg ccgtgagcga
      841 gcggctgggc tacggccggg agccgatccc cgggggagcg ttgtcctggg cgaactgggt
      901 ggcgggggtg atcgcggtgt acgccgcggt gttcgcggtg ggcgcgttcc tcaccggctg
      961 gcccgggcga ggactggtct acagcctggt cgccgcaggg gctttctcgt tgatctaccg
     1021 caacttgcgt gctgatccga cgctcgacgc cagcgttgac agcggtgatt cggccccgtt
     1081 aggtttgagg ccggatcgga ccggctccta ggccggcctc acgtcagtca aggagcgtcc
     1141 catgagtggc accgagcagc aggcccccgc gggcgggttc gtcctcaccc tcacggggcg
     1201 ggcggccgag gaggtccgga agttcataac ccaggagcag gtccccgccg acaccgccgg
     1261 gctccgggtc agcgtgctgc cgggcggctg ctccgggttc aagtacagcc tcaacgtcga
     1321 ggagcgtccg ctggacgacg acctggtgca cgagctgagc ggggtccggg tcttcgtgga
     1381 cggcttcagc gcccagtacc tcaccggcgt cacgatcgac tacatgagct cgatgcaggg
     1441 ctcgggtttc accttcagca atcccaacgc gaccgggggc tgtgggtgcg ggagcagctt
     1501 cacggcctga gctgcgccgc ctgagctgcg tgaaatgtga aaagtgaaaa ggggggtggc
     1561 cacggccgcc ccctcttcct ttttaccttt caccgttcac ttttcacgct cttgtatcac
     1621 ccatccttcc acctgcggat tgggcatagc ttctgcgccc tgccgacctc gtcgtcatcg
     1681 cgctgtatct cgcgggcacc ctgggcgtcg ggctctgggt cacccgcaag cagggcaccg
     1741 cgggcgacta cttcctcggc gcccgcgagc tgcccgcctg ggccgtgctg ctgtccatcg
     1801 tcgcgaccga gacctcagcc ctcaccgtca tctcggtgcc gggcgtcggc gcgcgcggca
     1861 gcctcgtctt tctccagctc accttcggct acttcctcgg tcgcgcggcg gtggcgtact
     1921 ggctgctgcc aggctacttc cgcggggagc aggagacggc gtacgcccga cttgagacgc
     1981 ggttcggcgc cgggacccgg cgactggtct cggtggtctt cctgctgacc cgcttcctgg
     2041 gtgacggggt tcgcatcttt gcagggtcta tcccgctggc gctcatcacc ggctggagcg
     2101 tgccgttctc gatcgtggtg atgggcctcg tgaccctggc ctacacctgg tttggcgggc
     2161 tcaaggcggt ggtctgggcc gacgtggtgc agctggtggt gtatctcgcg ggaggcgtgg
     2221 cggcgctctt catcgcctgg gacctcgccg gcggcgcctt cgcctccctc tctgccgcgc
     2281 aggaggcggg gaagctccga gtcatcgaca ccgcgatcga cttcaccgag acctacacgc
     2341 tgctcggcgg actggtcggc ggcgcgctcc tgtcggccgc ctcccatggg accgaccacc
     2401 tcatcgtgca gcgcctgctg gcgacccggt cgctggcgga tgcccgggtg gcgctggtcg
     2461 gctccggcgt ggtcgtgatc ctccagtttc tcctcttcct gctggtcggc atcgcgatct
     2521 ggtccgcggg gcttgccccc gagggcatgc ccgcggacat gatcttcccc cgcttcatca
     2581 tcgagcgcct gccggccggg atcgcggggc tcgtggtggc cggcatcctg gccgcggcga
     2641 tgagcacgat cagctcctcg atcaacgcgc tggccagctc gatgacccac gacatctacg
     2701 cgagctggac cggacggcgc gacccgaccc acctcttccg cgtgggccgg gcgttctccg
     2761 cgatctgggg gctggcgctg atcggtggcg ccctgatgtt ccacgcctat gcgtcgggga
     2821 gcgatacgcc ggtggtggtc ctcgccctct cgatcgcgtc ggtgacctat ggcgccctgc
     2881 tgggcaccta cctgctcgcc gcccgctggc cacgggcgac cgggcgggac gtggtcggtg
     2941 cggtgggggt caccgtggcc gtgatgctgc tggtggtctt cgcgcggagg ctggcggccg
     3001 acggtgtcgc gtggctcgag ccggtggggc gtctcgcctg gccgtggtac gtgccgctgg
     3061 ggacgtcgtt ggcgttcggg acgggggtgg cgctcagcta tcttccggcg cgcggcagga
     3121 gggggatgtc gtgacggttc tgatcggcgc cgacgtcggc ggcagcaaga ccgcggtcgg
     3181 agtcagcgag ggcgccaacg tcctggcgcg ggcggatggt ccaggcgcgg ccgtgcgccc
     3241 gagccgtgcg ctcgcctccg ccggcatgat cgcggaggtc gttcggcgcg cactggcgaa
     3301 cctcggccgc ctctcgggcg atgtcctcct cgtcggcgcg gccggcgcgg gccgggatcc
     3361 ggagcgcagc gagctggcga aggcgctccg cgcggagaac ctggccgcgc gggtcgaagt
     3421 caccacggac atcgagctgg cgctcgcggg cgcgttcgag agcggccccg ggatcgtggt
     3481 cagcgcgggc accggca
//
LOCUS       DASUYN010000163         4553 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_273794, whole genome shotgun sequence.
ACCESSION   DASUYN010000163 DASUYN010000000
VERSION     DASUYN010000163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4553)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4553)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4553
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_273794"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1409
                     /locus_tag="VF061_03150"
     CDS             <1..1409
                     /locus_tag="VF061_03150"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HEX6668527.1"
                     /translation="EHQVAKGTVDRSKLPRPGPSPEASFPQFERATLSNGLEIVLARR
                     TSIPQVRFDLLLDAGYAADQFGIPGTASLAMAMLDEGTRTRTSIGISDELAALGANLS
                     SGSSLDMSAVTLEALKDRLDPSLAVFADVVLNPSFPRADFERLKRQRLAQIQQEKADP
                     VGMALRVFPTLLYGEGHAYGNPWTGSGTEESTGRITRDDLVKFHRTWFKPNNAKLIVV
                     GATTMAEIRPRVERAFAGWARGDVPEKNIGAVEQQPRSTVYLLDRPEAIQSLVIVGNV
                     APPKANPSEPAIETMNHVLGGSFLARINMNLREDKHWSYGSFTFMRDAKGQRPFLAYA
                     PVQSDKTKEALIELRNELRGILSDRPATPQEIARAKSELTLTLPGNWETMGAVAGSLS
                     DIVTFGLDDRYFDTYGDRIAAQDVATVTAAAREVIHPDRLVWVVVGDRSKIEAGIREL
                     NLGAIRFIDADGKPLGAS"
     gene            1424..1882
                     /locus_tag="VF061_03155"
     CDS             1424..1882
                     /locus_tag="VF061_03155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668528.1"
                     /translation="MLPLLPALLLAPVDAAAQGGGGFGSGLSAGPRVGRDFENKAWTV
                     GGQLSVPLGERLELRPSGDLLFPRGEGMGWQLNGDAAIRFGQGGGLYAGGGVAFVHPD
                     DADTETGYNLFFGLSTAAPQQRTKGFLEFRWTFLDDTSPFRLALGFLYRL"
     gene            1896..2324
                     /locus_tag="VF061_03160"
     CDS             1896..2324
                     /locus_tag="VF061_03160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family peroxiredoxin"
                     /protein_id="HEX6668529.1"
                     /translation="MRTSSATAVWEGGLRNGRGQFNGKSGIIQGSYSFSTRFEGAKGT
                     NPEELIAAAHASCLSMALSGVLEKAGTPATRITTTASATVDQAGEGFRITRMQLEVRA
                     EVPGMDQAAFAKAAEAAKEGCPVSQALKGNVAFELDARLA"
     gene            2261..3289
                     /locus_tag="VF061_03165"
     CDS             2261..3289
                     /locus_tag="VF061_03165"
                     /inference="COORDINATES: protein motif:HMM:NF016214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HEX6668530.1"
                     /translation="MSRLPGAQGQRGLRAGREAGIDPVCHTLVGAGLARSGLARRTAL
                     GTTTLVIGANLPDIDVLAYLWGPGADLAFRRGWTHGVLALVLWPLALTGVMVLLDRGR
                     RRLRREALPSEIRPGQLLLLSCVSILSHPVLDTLNTYGVRWLMPFSGRWFYGDTLFIV
                     DPWLWLALGVGVLLSRRSRTTRSARVALWLAFGYAAAMAVGAVAARRIAAAELASISG
                     APVDRLLVSPVPVDPFRRSVVAEQGEVYRTGQFRWLGSPHLDPASLRVYRKGPREHPA
                     VRAAMTSTPGRRFLMWARFPAFQLEETDDGDVVVHIVDLRYADRPGVRFGAVSIPVRG
                     DSQSEVME"
     gene            complement(3268..4185)
                     /locus_tag="VF061_03170"
     CDS             complement(3268..4185)
                     /locus_tag="VF061_03170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668531.1"
                     /translation="MLVRWLLAFPMLLSLAAPITAQSEADLRRHFEGKRVTLRIDMPG
                     TEQGVDIYPGTERPLDYPRYASRLKDHGTAIEAGEDAMITKIRVKSSHIEFQLDGGGY
                     GTMGDETSSSVPVESSPKSKREKNLEAELKREKDPVRRRALQEELDDLRSAREREDAR
                     NRAQVAVAEEQKDQNIRQRRLAGGSRFNVRYRGDLPAAVLMPQGLEAALAEYVTFPQL
                     PVNTSAPGAAPAAAGFATGDSAAPVPPLPRKGMTAAELEQLLGTPVQMAERSEGTLRV
                     VTRTYRYPEGQVTAEFVEDVLIRYSMTSD"
     gene            4336..>4553
                     /locus_tag="VF061_03175"
     CDS             4336..>4553
                     /locus_tag="VF061_03175"
                     /inference="COORDINATES: protein motif:HMM:NF012610.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEX6668532.1"
                     /translation="MLNRSPLGEQVYLDLLQRISRGELPTGTKLRDAEIATQLGVSRT
                     PVREAMIRLAREGVLSSEPGRGFRLSPM"
BASE COUNT          667 a         1550 c         1624 g          712 t
ORIGIN      
        1 gcgagcacca ggtggcgaag gggacggtgg accgctcgaa gctgccccgg cccggcccgt
       61 cgcccgaggc gagcttcccc cagttcgagc gggccacgct ctccaacggg ctcgagatcg
      121 tgctggcgcg acgcacgtcc atcccccagg tccgcttcga cctgctgctc gacgccggct
      181 acgcggccga ccagttcggg atccccggta ccgcgagcct ggcgatggcg atgctcgacg
      241 aggggacccg gacccggacc tcgatcggga tcagcgacga gctcgcggcg ctgggcgcca
      301 acctctcgtc gggctcgagc ctcgacatgt ccgccgtcac cctcgaagcg ctgaaggaca
      361 ggctcgatcc ctcgctcgcg gtgttcgcgg acgtggtgct gaatccctcc ttcccgcggg
      421 cggacttcga gcggctcaag cggcaacggc tggcccagat ccagcaggaa aaggccgacc
      481 ccgtgggcat ggcgctccgg gtcttcccca ccctgctcta cggcgaggga cacgcctacg
      541 gcaatccatg gaccggctcg ggcaccgagg agtccaccgg ccggatcacc cgcgacgacc
      601 tcgtgaagtt ccaccgcacg tggttcaagc cgaacaacgc caaactgatc gtcgtcggtg
      661 ccaccacgat ggcggagatc cggccccggg tggagcgtgc cttcgccggg tgggcgcggg
      721 gcgacgtgcc ggagaagaac atcggcgcgg tggagcagca gccgcgctcg accgtgtatc
      781 tgctcgaccg gccggaagcc atccagtcgc tcgtgatcgt cggcaacgtg gcgcctccca
      841 aggccaaccc gagcgagccc gccatcgaga cgatgaatca tgtgctgggc gggtcgttcc
      901 tcgcgcggat caacatgaac ctccgggagg acaagcactg gtcctacggc tccttcacgt
      961 tcatgcgtga cgccaaaggc cagcgtccct tcctggccta cgcgccggtc cagtccgaca
     1021 agaccaagga ggcgctgatc gagctgcgga acgagctccg cgggatcctc agcgaccggc
     1081 cggcgacgcc gcaggagatc gcacgcgcca agtcggagct caccctcacg ctgccgggga
     1141 actgggagac catgggcgcg gtcgccggga gtctctcgga catcgtcacc ttcggactcg
     1201 acgaccgcta cttcgacacg tatggcgacc ggatcgcggc acaggacgtg gccacggtga
     1261 cggccgccgc ccgggaggtc atccaccccg accggctcgt ctgggtggtc gtgggcgacc
     1321 ggtcgaagat cgaagccggc atccgggagc tgaacctcgg cgcgatcagg ttcatcgacg
     1381 ccgacggcaa gcccctcggg gcctcgtgag ggcccgatgg gcggtgctgc cgcttctccc
     1441 cgcgctcctg ctggcgcccg tggatgcggc ggcgcaggga ggtggcgggt tcggcagcgg
     1501 gctctcggcc ggcccccggg tgggccgcga cttcgagaac aaggcatgga ccgtcggggg
     1561 acagctctcc gtccccctgg gcgagcgcct ggagctccgg cccagcgggg acctcctgtt
     1621 cccccgcggc gagggaatgg gttggcagct caacggcgac gcggcgatcc gcttcggtca
     1681 gggcgggggg ctgtacgccg gaggcggggt cgccttcgtg catccggatg acgccgacac
     1741 cgaaaccggc tacaatctgt tcttcggcct gagcacggcg gcgccgcagc agcggaccaa
     1801 ggggttcctg gagttccgct ggaccttcct ggacgacacc agtcccttcc gcctcgcgct
     1861 cgggttcctg tatcggctgt aaccaggaga gagcgatgag gaccagcagc gcgacagcgg
     1921 tgtgggaggg cggcctccgc aacggccgcg gccagttcaa cggcaagtcc ggcatcatcc
     1981 aggggagcta ctcgttctcc acccgcttcg agggagcgaa gggcaccaat cccgaggagt
     2041 tgatcgcggc ggcgcacgcc tcctgcctca gcatggcgct gagcggagtg ctggagaagg
     2101 ccggcacacc cgcgacccgg atcacgacca ccgcctccgc caccgtcgac caggcgggtg
     2161 agggcttccg gatcacccgc atgcagctcg aggtgcgggc agaggtaccg ggcatggacc
     2221 aggccgcgtt cgcgaaggca gccgaggccg ccaaggaggg gtgtcccgtc tcccaggcgc
     2281 tcaagggcaa cgtggccttc gagctggacg cgaggctggc atagatccgg tctgccacac
     2341 gctggtcggc gccgggctgg cacggagcgg actggcgcgg cggaccgccc tgggaacgac
     2401 gacgctggtg atcggggcca atctccccga catagacgtg ctggcctacc tgtgggggcc
     2461 gggcgcggat ctcgccttcc gtcgcggctg gacccatggc gtcctggcgc tggtgctgtg
     2521 gccactcgcc ctcaccggcg tcatggtgct gctcgatcgg gggcggcggc ggctccggcg
     2581 ggaggcactc ccgtccgaga tccggccagg tcagctgctg ctgctctcct gcgtctccat
     2641 cctgtcccac ccggtcctcg acaccctcaa cacgtacggc gtgcggtggc tgatgccgtt
     2701 cagcgggcgc tggttctacg gcgatacgct gttcatcgtg gacccgtggc tgtggctggc
     2761 gctgggcgtg ggggtgctgc tcagccggcg aagccggacg acgaggtcgg cccgagtcgc
     2821 gctgtggctc gccttcggct acgcggcggc gatggcggtg ggcgccgtgg cggcgcggcg
     2881 gatcgccgcc gccgagctgg cgtccatctc cggcgcgccg gtggaccggc tgctggtctc
     2941 accggtgccg gtggatccgt tccggcgcag tgtcgtagcg gagcagggcg aggtgtaccg
     3001 gacggggcag ttccgctggc tcgggtcccc gcacctggac cccgcttccc tgcgcgtcta
     3061 ccggaagggt ccgcgcgagc acccggcggt cagggccgcg atgaccagca cgcccggacg
     3121 ccggttcctg atgtgggccc gcttcccggc ctttcagctg gaggagacgg acgatggtga
     3181 tgtggtagtg cacatcgtgg acctgcgcta cgccgaccgc ccgggggtac ggttcggggc
     3241 agtctccatc ccggtgcgcg gcgattctca gtcggaggtc atggagtagc ggatcagcac
     3301 gtcctcgacg aactccgcgg tgacctggcc ttcagggtag cggtaggtcc gggtgacgac
     3361 tcgcagggtg ccctccgaac gctcggccat ctgcaccggg gtgccgagca gctgctccag
     3421 ctcggctgcc gtcatcccct tccggggcag cggggggacg ggggcagccg agtcgccggt
     3481 ggcgaagccg gcggccgccg gtgcggcacc gggggccgac gtgttcacgg gcagctgggg
     3541 gaaggtgacg tactccgcga gtgcggcttc caggccctgc ggcatgagca ccgccgcggg
     3601 caggtcgccg cggtagcgga cgttgaagcg cgatccgccc gccagcctac gctggcggat
     3661 gttctgatcc ttctgctcct ccgcgacggc gacctgggca cggttccgcg cgtcctcccg
     3721 ctcccgggcg gaccggagat cgtccagctc ctcctggagg gcgcgccggc gaaccggatc
     3781 cttctcccgc ttgagctccg cctcgaggtt cttctcccgc ttggacttgg gcgaggactc
     3841 cacagggacc gagctggaag tctcgtcccc catcgtgccg taccctcccc cgtcgagctg
     3901 gaactcgatg tgactcgact tcacccggat cttggtgatc atcgcgtcct cgcccgcctc
     3961 gatggcggtg ccgtggtcct tgagccgact ggcgtagcgc gggtagtcga gaggccgctc
     4021 ggtgccgggg tagatgtcca cgccctgctc ggtccccggc atgtcgatcc tgagggtcac
     4081 tcgcttgccc tcgaagtggc gcctcaggtc cgcctcggac tgggccgtga tgggggccgc
     4141 gaggctgagg agcatcggga acgcgagaag ccagcgaacg agcatcgggt ccctccgccg
     4201 cggcggcggt tcagggatct ggtgcgccgc aaaagtgctg cgggggcacg ggaaaatcga
     4261 gggtggccgt tgatgcgctt gcgaactctg gacagttttc atactgtatt cagaactcag
     4321 agttatggat gttatatgct gaaccggtca cccttgggtg agcaggttta tctcgatctg
     4381 ctgcaacgaa ttagccgtgg cgagctcccc accggcacca agctccgcga tgccgagata
     4441 gccacgcagc ttggtgtcag ccgcacgccg gtcagagagg cgatgatccg gctcgcccgt
     4501 gaaggagtgc tctccagcga gcccggccga ggattccggc tgagcccgat gga
//
LOCUS       DASUYN010000164         2637 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_274108, whole genome shotgun sequence.
ACCESSION   DASUYN010000164 DASUYN010000000
VERSION     DASUYN010000164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2637)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2637)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2637
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_274108"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..232
                     /locus_tag="VF061_03180"
     CDS             <1..232
                     /locus_tag="VF061_03180"
                     /inference="COORDINATES: protein motif:HMM:NF016955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TerB family tellurite resistance protein"
                     /protein_id="HEX6668533.1"
                     /translation="EEERRTRFAAYADRLRQRFGRAQRLELVERMWSVAFREGAIGAQ
                     EARLMTVAAELLGLGPAEVAEVRRRLRDADAR"
     gene            229..1149
                     /gene="xerD"
                     /locus_tag="VF061_03185"
     CDS             229..1149
                     /gene="xerD"
                     /locus_tag="VF061_03185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009009 - site-specific recombinase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HEX6668534.1"
                     /translation="MTVPAVRDLIDRAFWLEGFRDYLALEAGHSPNTVEAYLRDLRRM
                     GEFALSRGVRDPARVGRPLLRDFVYLLKDLGLSAATIRREVSAIRTYYGFLVGEGRVS
                     EDPSDRLETPRRGRTLPDTLTVREVEALVAAPAIEDPLGWRDRALLELAYGAGLRVSE
                     VCGLGLRDLLLTEGLVRILGKGGKQRLVPIGRTTIGAVSVYLHSLRPTLDRGGSGGRV
                     LLNARGEPLSRVGAWGIVKRAAERAGLTKRVTPHTLRHSFATHLLEGGADLRAVQEML
                     GHADLSTTQIYTHVDREYLRSVHKQYHPRG"
     gene            1157..2551
                     /locus_tag="VF061_03190"
     CDS             1157..2551
                     /locus_tag="VF061_03190"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEX6668535.1"
                     /translation="MIRTGLCLVVACAACVRYEPRPLDPAAHRVEMMRRDLRDSALVA
                     AVARHGGRPQPDRWTDQQLALAALRLRSDLRRLRAEWRGATAAVRTAGERPAIGVQGD
                     VERRVSGRDEGSPWVVGLAGLLQLELGGKRGARLQAARAGVTLAESRLVGASRAAAVE
                     ARLAAASLAHAIADADDASAEVRALEAVHALERARFAEAALDASELARTGSEIQDARL
                     KAAEAQHAALAARAALSAAIAVPVRALHSLVPVVGRLTACASIDSVAPADLAAGVVTR
                     RPELAVALAEYAVAESRLRLEVARQFPDLELGPGFVWDQGVNRWALAFALPALLGSRN
                     RGAIAEAGVAREVAGLRVAEVQDSVLADVEVAAQRCRGAALELTAADSVVAAAERLHE
                     RQRAAYQRGETSSLEPARAELQLVRARRARRAAERRLALASMQFQHAGGGPPSADAAW
                     PDPRLDPDEEAPRP"
BASE COUNT          313 a          957 c          994 g          373 t
ORIGIN      
        1 cgaggaggag cgccgcaccc gcttcgccgc gtatgccgac cgactccgtc aacgtttcgg
       61 ccgcgctcag cgtctggaac tggtggagcg catgtggtcg gtggcgttcc gcgaaggtgc
      121 catcggcgcc caggaagcca ggctcatgac ggtggccgcg gagctgctcg gcctcggccc
      181 cgccgaggtc gccgaggtac gccggcggct ccgcgacgcg gacgcgcgat gacggtccct
      241 gcggtccgcg acctgatcga tcgcgccttc tggctcgagg ggtttcgcga ctacctcgcg
      301 ctggaggccg ggcacagccc caatacggtc gaggcgtatc tccgggacct gcgccggatg
      361 ggagagttcg cgctgtcccg gggggtccgg gatcccgccc gcgtcgggcg tccgttgctg
      421 cgggacttcg tctacctgct caaggacctg ggtctcagtg cggccactat ccgccgcgag
      481 gtctccgcca tccgcaccta ttacggcttc ctggtcggcg aggggcgggt gagcgaggac
      541 cccagcgatc ggctggagac gccccggcgg ggccggacgc tgccggacac cctgaccgtc
      601 cgcgaggtcg aggcgctggt cgcggccccc gcgatcgagg acccgctggg ctggcgcgac
      661 cgggcgctcc tggagctggc ctacggcgcc gggttgcgcg tatccgaggt atgcggtctc
      721 ggcctcaggg acctcttgct cacggagggg ctggtgagga tcctcggcaa gggcggcaag
      781 cagcgcctgg tcccgatcgg ccggacgacc atcggcgcgg tctcggtgta tctccattcc
      841 ctgcgaccca ccctcgatcg cgggggctcc ggcggacgcg tgctcctcaa cgcccggggc
      901 gagccgctgt cccgggtcgg cgcctggggg atcgtgaagc gggccgccga gcgcgccggc
      961 ctcaccaagc gggtcacacc gcacactctg cggcacagct tcgccaccca cctgctcgag
     1021 ggcggggccg atcttcgcgc ggtgcaggag atgctggggc atgcggacct ctccaccacc
     1081 cagatctaca cgcacgtgga tcgtgagtac ctgcgctcgg tccacaagca ataccatccg
     1141 cgcggctgag acgggcgtga tccggaccgg tctgtgtctc gtcgtggcgt gcgccgcgtg
     1201 cgtgcgctac gagccgcgcc cgctcgatcc ggcggcgcac cgggtcgaga tgatgcgtcg
     1261 tgatcttcgc gacagcgcgc tggtggctgc ggtggcgcgc cacggcggcc ggccgcaacc
     1321 ggaccgctgg accgaccagc agctcgcgct cgccgcgctc cgccttcgct ccgatctccg
     1381 ccgactccgc gccgagtggc gcggcgcgac cgcggcggtg cgcaccgcag gcgagcgtcc
     1441 cgccatcggc gtgcagggcg atgtggaacg acgggtgagc ggcagagacg agggaagtcc
     1501 gtgggtcgtc gggctcgccg gactgctgca gctcgagctc ggcggcaagc ggggcgcccg
     1561 cctgcaggcg gctcgtgccg gtgtcactct ggccgagagc cggctggtgg gcgcctcgcg
     1621 cgccgcggcc gtcgaggccc gtctcgccgc cgcctcgctg gcccacgcga tcgccgatgc
     1681 cgacgacgcg agcgccgagg tccgggccct ggaggcggtc catgcattgg agcgcgcccg
     1741 cttcgccgag gccgccctcg atgcgtccga gctcgcccgc accggcagcg agatccagga
     1801 cgctcgcctg aaggcggcgg aggcccagca tgccgcgctc gcggcccgtg ccgccctttc
     1861 ggccgcgatc gcggtcccgg tccgggcgct ccactcgctc gtgccggtcg tgggccggct
     1921 caccgcgtgc gcctccatcg attcggtcgc acccgccgac ctggccgccg gtgtcgtgac
     1981 gcgccggccc gagctcgcgg tggcgttggc cgaatacgcg gtggccgagt cacgactccg
     2041 gctcgaggtc gcgcggcagt ttcccgacct ggagctcgga cccgggttcg tgtgggacca
     2101 gggggtgaac cgctgggccc tcgccttcgc gctcccggca ctgctcggta gtcgcaaccg
     2161 cggtgcgatc gcggaggccg gagtggcgcg cgaagtggcg gggctccggg tggccgaggt
     2221 ccaggattcg gtgctggccg acgtggaggt cgcggcgcag cgctgtcggg gcgcggcgct
     2281 cgagctgacg gcggcggatt ccgtagtggc cgcggccgag cgtctccacg agagacagcg
     2341 cgcagcctac cagcggggcg agacatcgag cctcgagccc gcgcgagccg agctccagct
     2401 ggtgcgtgcg cgacgcgccc gtcgggccgc cgagcggcga ctcgccctcg cctccatgca
     2461 attccagcac gccggcggcg ggccgccctc ggcggacgca gcctggcccg acccgcgact
     2521 cgaccccgac gaggaggccc cccgtccgtg agaccacgcg tgatgatcgt gctgctgatc
     2581 ctgctcgcgc tgctggccgg agcgctcatc ctgcggccgg gtggcgggag ggaggag
//
LOCUS       DASUYN010000165         2642 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1817540, whole genome shotgun sequence.
ACCESSION   DASUYN010000165 DASUYN010000000
VERSION     DASUYN010000165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2642)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2642)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2642
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1817540"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..275)
                     /locus_tag="VF061_03195"
     CDS             complement(<1..275)
                     /locus_tag="VF061_03195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668536.1"
                     /translation="MAPAPQLLLTYDFPPIGGGIARWMAELAKRYPPGSLVVSTGQHP
                     DSPDVDSTFPNRVDRLPLAARKLRTLRGLLFWSRRAAVLTRECGAEF"
     gene            complement(285..1370)
                     /locus_tag="VF061_03200"
     CDS             complement(285..1370)
                     /locus_tag="VF061_03200"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEX6668537.1"
                     /translation="MRVALLTSANGWRGSGSSYAKLARGLGERGHVAHLVTASARLTP
                     RLQKMGLSVTEIPGRNTGPREVWALLRVLRAIRADVVVVDTPRDVRLAAWATLVRQAG
                     IVYRYNLNYRRPRHDLTDRAYLRRVSACVYQSRYIRDDAAQAPSLRRIPHFLIPNGYD
                     LARYAPKPEEGRAFRARYGIAPAASVILTSAKLTRNKGHEVAIAALGRLHAAGVPLIY
                     LICGDGGREAELRTLARSVGLPAVFTGLLESDELIAALAAADVVVHPSLNEIFPNAVG
                     EAMACGCPVIAADAGGTAELVGRDGAGVLVPPGDPEALAAAVRELLEDPERRGRLGDA
                     ARKRVEAEFPLRRMVERYEAALTAVIE"
     gene            1391..2344
                     /locus_tag="VF061_03205"
     CDS             1391..2344
                     /locus_tag="VF061_03205"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024914.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX6668538.1"
                     /translation="MRVVVLGAAGARRTEMAIVRAARGLGYPCRLVDAAGWHRRLGHL
                     ADTLIVRLAEGFRPDAVVFTRQAHQLEPERVAELSAGRAGGVWYFDYAPEPAAELLAL
                     ARAAGRLFVTCRSQVEAYRSAGVPQVFFLPQAMDPAYDRPAAGVPARFRCDLSFVGSG
                     QYPHRHELLRRLARVGRLEIRGPGWEGATDLPVAGGPVWGKRFARVVAGAAISIGAHA
                     VAGQERQTACDSNRIWKVLGCGGFYLGAWQPGSDAFARDGEHCAWYRDAEEAVTLAGR
                     YLAAADERAAIAAAGREHALRHHTYAHRLHLLLDGRGHTMV"
     gene            complement(2329..>2642)
                     /locus_tag="VF061_03210"
     CDS             complement(2329..>2642)
                     /locus_tag="VF061_03210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668539.1"
                     /translation="MFHYGWARPAQALREKRELGKTMYPWRNADERLPLLAWIPGIQP
                     FRGSHPLVAREWIERRLEDPERVIAPRRFRWHHLRYYVSGWIERLTGVRVFEFRNYTI
                     V"
BASE COUNT          351 a          945 c          996 g          350 t
ORIGIN      
        1 atgaactccg ctccgcactc gcgggtgagc acggcggccc gccgggacca gaagagcagg
       61 ccgcggaggg tgcggagctt gcgcgccgcg agcggcagcc ggtccacccg gttggggaag
      121 gtcgaatcca cgtcgggcga atcggggtgc tggccggtgg agaccaccag cgagccgggt
      181 gggtagcgct tggccagctc cgccatccac cgggcgattc cgccgccgat gggcgggaag
      241 tcgtaggtga gcagcagctg gggggccggg gccatggcgc aaatctactc gatgaccgcg
      301 gtgagcgcgg cctcgtagcg ctcgaccatc cgccgcagcg ggaactcggc ctcgacccgc
      361 ttccgggcgg cgtcgccgag gcggccgcgc cgctcggggt cctcgagcaa ctcgcgtacg
      421 gcggccgcca gcgcctccgg atccccgggc ggcaccagga cccccgcgcc gtcgcggccc
      481 accaactccg cggtgcctcc cgcgtcggcc gcgatgaccg gacacccgca ggccatcgcc
      541 tctcccacgg cgttggggaa gatctcgttg agcgacggat gcaccaccac gtccgccgcg
      601 gcgagcgccg cgatcaactc gtccgattcc aggagaccgg tgaagacggc cggcaggccg
      661 accgagcgcg ccagcgtgcg gagctccgcc tcgcgaccgc cgtcgccgca gatcaggtag
      721 atcagcggga cgcccgccgc gtgcagccgg cccagcgcgg cgatcgccac ctcgtggccc
      781 ttgttccggg tgagcttggc cgaggtcagg atcaccgacg cggccggggc gatgccgtag
      841 cgggcacgga aggcccgccc ttcctcgggc ttgggcgcgt agcgcgccag gtcgtacccg
      901 ttggggatga ggaagtgcgg gatgcgccgg agcgagggcg cctgcgcggc atcgtcccgt
      961 atgtagcgcg actggtagac gcaggccgac acccggcgga ggtaggcgcg gtccgtgaga
     1021 tcgtgtctcg gccggcggta gttgaggttg tagcggtaga cgatgccggc ctggcggacc
     1081 agggtggccc aggccgcgag ccgcacgtcg cgaggcgtgt ccaccaccac cacgtcggcg
     1141 cggatggcgc ggaggacgcg gaggagcgcc cagacctcgc ggggcccggt gttccgcccg
     1201 gggatctcgg tcacggagag gcccatcttc tggagcctgg gcgtgagccg tgcggacgcc
     1261 gtcaccaggt gcgccacgtg tccgcgctcg ccgagcccgc gggccagctt ggcgtagctg
     1321 gagccggatc cgcgccaacc gttggccgat gtcagcagag cgacgcgcat tgtcacgcta
     1381 taatagtccc atgcgagtcg tcgttctcgg cgcggccggc gcgcgccgga cggagatggc
     1441 gatcgtgcgc gcggcccggg ggctgggcta cccctgccgc ctggtggacg ccgcgggctg
     1501 gcaccggcgg ctgggccacc tcgccgacac cctgatcgta cggctggccg aaggcttccg
     1561 gcccgacgcc gtggtcttca ctcgccaggc ccaccagctc gagccagaac gggtcgccga
     1621 gctgagcgcc gggcgcgcgg gcggagtctg gtacttcgat tacgcgccgg agcccgccgc
     1681 cgagctgctg gcgctggcgc gcgcggcggg acggctcttc gtcacctgcc gatcgcaggt
     1741 ggaagcctac cgctcggccg gtgtgcccca ggtgttcttc ctcccccagg ccatggaccc
     1801 ggcctacgac cggcccgcgg cgggggtccc ggcgcgcttc cgctgcgacc tgtcgttcgt
     1861 cgggtcggga cagtacccgc atcgccacga gctgctccgg cggctggccc gcgtgggccg
     1921 gctggagatc cgcggccccg gctgggaggg cgcgaccgat ctgccggtgg ccgggggacc
     1981 ggtctggggc aagagattcg cccgcgtggt cgccggcgcg gcgatctcga tcggtgcgca
     2041 tgccgtggcc ggacaggagc ggcagaccgc ctgcgactcc aaccggatct ggaaggtgct
     2101 cgggtgcggc ggcttctatc tcggcgcgtg gcagccgggc agcgacgcct tcgcgcgcga
     2161 cggggagcac tgcgcctggt accgcgatgc ggaggaggcg gtgacgctcg cgggacgcta
     2221 cctggccgcg gcggacgagc gcgcggcgat cgccgccgcg ggccgggagc acgcgctccg
     2281 gcaccacacc tacgcccacc gccttcacct gctgctggac gggcgcggtc atacgatggt
     2341 gtagttgcgg aactcgaaca cccgcacgcc ggtgagtcgc tcgatccagc ccgacacgta
     2401 gtagcgcagg tgatgccagc ggaagcgccg cggcgcgatg acccgctccg ggtcctccag
     2461 ccgccgctcg atccactcgc gcgccaccag ggggtggctg ccccggaacg gctggatccc
     2521 gggaatccac gcgagcagtg gcagccgctc gtctgcgttg cgccagggat acatcgtctt
     2581 ccccagctcc cgtttctccc gcagcgcctg cgcgggccgg gcccagccgt agtggaacat
     2641 ct
//
LOCUS       DASUYN010000166         6111 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1156617, whole genome shotgun sequence.
ACCESSION   DASUYN010000166 DASUYN010000000
VERSION     DASUYN010000166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6111)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6111)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6111
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1156617"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..924
                     /locus_tag="VF061_03215"
     CDS             <1..924
                     /locus_tag="VF061_03215"
                     /inference="COORDINATES: protein motif:HMM:NF015155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HEX6668540.1"
                     /translation="DSLRADPRVREVRSLVDLEPGTSLLAYSVLYSDLEAAREEYPDF
                     LDAYLSRDRRLALLDVIPADTTSLTSSMDLVRRARELGGAELRGTRGMQVQVGGYAAS
                     ALDFQTDLLRRFPLLVGLILGATALMLAIAFRSVLVPLKAIVMNTLSVSATFGLIVLV
                     FQLGVGSQLFGLDGPTSAIFVVVPVLVFAVVFGLSMDYEVFLLSRIKEAYDRSGRNTT
                     ATMEGLSATASVITSAALIMILVFGIFAFARVLAMQLLGFGLAVAVLLDATVIRMVLV
                     PAFMQMMGRWNWWPGGRRPGRPSGEMDAING"
     gene            complement(954..1424)
                     /locus_tag="VF061_03220"
     CDS             complement(954..1424)
                     /locus_tag="VF061_03220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668541.1"
                     /translation="MSRFHFSDPAFELPDVESVLDALEATVVAPETPMFDAARQSWQP
                     VGRHPDVRAAWSARARYRPPGSGLDLPPLPEPDAPLDPAEDDAARRRAAYAMVIRGNR
                     LPAEEPPPPEPRPRRSIAAGLALVLVALLLIGVAVVELASGLVRLAARATRLSP"
     gene            complement(1430..4342)
                     /gene="polA"
                     /locus_tag="VF061_03225"
     CDS             complement(1430..4342)
                     /gene="polA"
                     /locus_tag="VF061_03225"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:NF004397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006261 - DNA-templated DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HEX6668542.1"
                     /translation="MPNHTPPRLFLVDGYALIYRAFYAMIARPLRTSKGENTSAAWGV
                     VNFLMRLREKYRPDYVAWINDAGTSFRAERYPEYKSTREKLDDELQADFDRAVERICA
                     LLEAFRIPLITVPGYEADDVIGTLATRAAEAGLQAVIVSGDKDFYQLIGPGITLLNPG
                     RGGPAAVEETWVDESNASERLGIPPRQVVDYLSLVGDSSDNVPGVRGIGEKGAQKLLA
                     EYGDLDTLLARAGEITAKRPREALLAYADNARLSRELVTIKRDVPIELNVAELTLKEP
                     DRESAIRILTELEFFSLARKLGGGEGDGGGRPAGNGRAGQGAILEEPGAPGDGDETGA
                     GEAQGGGFAASDWLAIDEPPALEVRVVEDPGGIPALVERLRAAPVVALDGAASSLSAQ
                     RADLVGLSLSVTPAEVWYLPFGHRGRSDLGSLGDGASAAAAKNLPPITDAAMAPLYGL
                     LTDASVPKVGHNIKYCWQVLRRAGVELAGVAYDTMVESFILDPGRRSHALDNLCLEHL
                     GRTIKTYQEVVGRGKAEIPFAEVAISVAADYCGADSATVLALHQHFTPAIGEMQMEHL
                     LREVEMPLVEVLVDMEWEGIAIDRALFARLDGELSADLRRLEGEISRVAGVDLNFNSP
                     RQLAMVLFEKQQLPVLKKTKTGPSTDADVLEQLAAMGHELPRLILEYRELQKLKSTYV
                     DTLPASVDPRTGRIHTTFNQAGAATGRLSSSEPNLQNIPVRTLRGEEIRKGFVPRDGW
                     TFLVADYSQIELRLMAHLSGDPAFIEAFRQGGDIHRQTAALIFNLPADAVTSEMRARA
                     KTINFATIYGQGPFALSRQLNISMEDARSFIARYFERFAGVRAFLDQQIKLAREQGYV
                     ETIFKRRRYIPEIRDRNFNLRAYGERNAQNSPLQGSAADLIKVAMTRIHHAIRDAGLR
                     SRMVLQVHDELVFEVPPDELERMMDLVRSRMERVVELQVPLVVDLGVGPNWLEAKR"
     gene            complement(4458..5798)
                     /locus_tag="VF061_03230"
     CDS             complement(4458..5798)
                     /locus_tag="VF061_03230"
                     /inference="COORDINATES: protein motif:HMM:NF040439.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GWxTD domain-containing protein"
                     /protein_id="HEX6668543.1"
                     /translation="MRRLVLVAVSVLAASAIGCGSWKRVGSEEQPRPTEALTRLLNTT
                     EFYQRLGRLAAGDPMPFVGTVAFAAGPADSVIAVLGLSLENRAFAFQREGNAFVARYR
                     VALSFKREGAPPVDLAREELVRVATFQETQRADESVLFQQVLRLLPGTYKVTATVRDA
                     SSTAESSATGEYTAPNFGRATYSAPVLTYQATGRGSLADPLTLVLNPRGAVGYGSDTL
                     LAYVEGYSFAGPTMVPFKVLDEQQNTIYDDSLRFRGGREVESQVVRLAPDSVSLGELE
                     IVVGAEPERSASALVSFTQAWVVTNFDEMLDLLRYFGEDERIAQMRRAPEGERARLWR
                     DFYASTDPNAGTPENEALNQYFGRVNAANQRFKDEGVPGWRTDRGEVFVTLGPPDESV
                     ESTPGTASRIIRWTYLTHRLEIYFQDETGFGRLRLTPGSRAEYERILSRVRRQG"
     gene            5924..>6111
                     /locus_tag="VF061_03235"
     CDS             5924..>6111
                     /locus_tag="VF061_03235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668544.1"
                     /translation="MSADNLVGRTVAGYHLAKYIGEGGTATVYRAEHAERGESAVKIL
                     RPRLASDPIAVKRFLREA"
BASE COUNT          885 a         2098 c         2176 g          952 t
ORIGIN      
        1 gactcgctcc gcgccgaccc ccgggtgcgc gaggtccgga gcctggtgga cctcgagccc
       61 ggcacctcgc tgctcgccta ctccgtgctc tacagcgatc tggaggcggc gcgggaggag
      121 tatcccgatt tcctggacgc ctatctcagc cgtgaccgcc ggctggcgct cctcgacgtg
      181 atcccggccg acacgacctc gctgacctcg tccatggatc tggtccggcg ggcgcgcgag
      241 ctgggcggcg cggagctgcg cgggacccgc ggcatgcagg tacaggtggg gggctacgcg
      301 gcctccgccc tggactttca gaccgacctg ctgcgccgct tccccctgct ggtgggcctg
      361 atcctcggcg ccacggcgtt gatgctcgcg atcgccttcc gctcggtgct ggtgccgctc
      421 aaggcgatcg tcatgaacac cctctcagtg agtgccacct tcgggctcat cgtgctggtg
      481 ttccagctgg gcgtgggctc gcagctgttc gggctggacg gccccacgtc cgcgatcttc
      541 gtggtggtac cggtgctggt cttcgcggtg gtgttcggac tcagcatgga ctacgaggtg
      601 ttcctattga gccggatcaa ggaggcctac gaccgctccg gccggaacac cacggcgacc
      661 atggaaggcc tgagcgccac ggcctcggtg atcacctcag ccgcgctcat catgatcctg
      721 gtcttcggga tcttcgcgtt cgcgcgggtg ctggcgatgc agctgctggg gttcgggctg
      781 gcggtggcgg tgctgctgga cgccacggtg atccggatgg tgctggtgcc ggcgttcatg
      841 cagatgatgg ggcggtggaa ctggtggccg ggagggcggc ggccggggcg accgtcgggg
      901 gagatggacg ccatcaatgg ctaggggacc cccggtgagg ggagtcttcc gcctcagggt
      961 gagagacgcg tcgcgcgggc agccagccga accagcccgc tcgccagctc caccaccgcg
     1021 acaccgatga gcagcagcgc caccaggacg agcgccagac cggccgcgat cgagcggcgc
     1081 ggccggggct ccggcggggg cggttcctcg gccggcagac ggttcccccg gattaccatg
     1141 gcatacgccg cccggcgccg ggccgcgtcg tcttccgcgg ggtcgagcgg ggcatccggc
     1201 tcgggcaacg gcggcagatc gagccccgag cccggcggcc ggtagcgcgc gcgcgcggac
     1261 caggcggccc gcacgtcggg atgccggccc accggctgcc agctctgccg cgcggcgtcg
     1321 aacatcggcg tctcgggcgc caccacggtg gcttccaggg cgtcgagcac ggactcgacg
     1381 tcgggcagct cgaaggcggg gtcggagaag tggaagcggg acatcgcgcc tatcgcttgg
     1441 cctccagcca gttcggcccc acgccgagat ccaccaccag agggacctgc agctccacca
     1501 ccctctccat ccggctccgc accagatcca tcatccgctc cagctcgtcc ggcgggacct
     1561 cgaagaccag ctcgtcgtgc acctggagca ccatccggct ccggagcccg gcgtcccgga
     1621 tggcgtggtg aatccgcgtc atcgccacct tgatgagatc ggcggccgag ccctggagcg
     1681 gggagttctg ggcgttccgc tcgccgtagg cccgcaggtt gaagttccgg tcgcggatct
     1741 ccggaatgta gcgccgccgc ttgaagatgg tctccacgta gccctgctcg cgcgccagct
     1801 tgatctgctg gtcgaggaac gcgcgcaccc ccgcgaaccg ctcgaagtag cgggcgatga
     1861 agctgcgggc gtcttccatg gagatgttga gctgccggct cagcgcgaag ggcccctgcc
     1921 cgtagatcgt ggcgaagttg atcgtcttgg cccgcgctcg catctccgac gtcaccgcgt
     1981 cggccggcag attgaagatg agcgccgccg tctggcggtg gatgtctccg ccctggcgga
     2041 aggcctcgat gaaggctgga tcgcccgaca ggtgcgccat cagccgcagc tcgatctggg
     2101 agtagtccgc caccaggaag gtccagccgt cccggggcac gaaccccttg cggatctcct
     2161 cgccccggag cgtgcgcacc gggatgttct gcaggttggg ctcgctcgag ctgagccgtc
     2221 ccgtcgcggc gccggcctga ttgaaggtgg tgtggatccg gccggtccgg gggtccaccg
     2281 aggccgggag cgtgtccacg tacgtgctct tgagcttctg gagctcgcgg tactccagga
     2341 tgaggcgggg cagctcgtgg cccatggccg cgagctgctc cagcacgtcg gcgtcggtcg
     2401 agggcccggt cttggtcttc ttgaggaccg ggagctgctg cttctcgaac agcaccatcg
     2461 cgagctggcg cggcgagttg aagttgaggt ccacgccggc gacccgggag atctcgccct
     2521 cgagccgccg cagatccgcg ctcagctccc cgtcgagccg cgcgaacagc gcccggtcga
     2581 tggcgatgcc ttcccactcc atgtccacca gcacctcgac cagcggcatc tccacctcgc
     2641 gcagcaggtg ctccatctgc atctcgccga tcgccggcgt gaagtgctgg tggagggcga
     2701 gcaccgtggc actgtccgcg ccgcaatagt ccgccgccac cgagatggcg acttccgcga
     2761 agggaatctc cgccttgccc cgtcccacca cctcctggta ggtcttgatc gtgcggccga
     2821 ggtgctcgag acagagattg tcgagcgcgt gagagcggcg gccgggatcg aggatgaagc
     2881 tctccaccat cgtgtcgtag gccacgcccg ccagctccac ccccgcgcgc cgcagcacct
     2941 gccagcagta cttgatgttg tggccgacct tgggaaccga ggcatcggtg agcaggccgt
     3001 agagcggggc catcgcggcg tcggtgatcg gcgggaggtt cttcgccgcc gccgccgagg
     3061 ccccgtcacc cagcgacccc agatcggacc ggccgcggtg gccgaagggg agataccaga
     3121 cctccgccgg tgtcaccgag agcgacaggc cgaccagatc ggccctctgc gcggacagcg
     3181 acgaggccgc gccatcgagc gcgaccaccg gggccgcgcg gaggcgctcc accagcgcgg
     3241 ggatgccccc cgggtcctcc accaccctga cctcgagggc gggcggctcg tcgatcgcga
     3301 gccagtcgct ggcggcgaag ccgccgccct gggcctcgcc ggcgccggtc tcgtcgccgt
     3361 cgccgggggc gccgggctcc tccaggatcg ccccctgccc cgccctgccg ttccccgccg
     3421 gcctcccgcc cccgtcgccc tcaccaccgc cgagcttccg ggccagagag aagaactcga
     3481 gctcggtgag gatgcggatc gcggactcgc gatcgggctc cttcaaggtc agctcggcga
     3541 cgttcagctc gataggaacg tcgcgcttga tggtcaccag ctcgcgggag agccgcgcgt
     3601 tgtcggcgta ggcgaggagg gcctcgcgcg ggcgcttggc cgtgatctca ccggcgcggg
     3661 cgaggagcgt gtcgaggtcg ccgtactcgg ccaggagctt ctgggcgccc ttctcgccga
     3721 tgccccggac gccgggcacg ttgtcggagg agtcgcccac cagcgagagg tagtcgacca
     3781 cctggcgcgg cgggatcccc aggcgctccg aagcgttgga ttcgtctacc caggtctcct
     3841 ccaccgccgc cggcccgccg cgaccggggt tgaggagcgt gataccaggg ccgatgagct
     3901 ggtagaagtc cttgtcgccg gagacgatga ccgcctggag cccggcttcg gccgcgcgcg
     3961 tggccagggt gccgatcacg tcgtcggcct cgtagcccgg gacggtgatc agcgggatgc
     4021 ggaaggcctc gagcagggcg cagatccgct cgaccgcgcg gtcgaagtcc gcctggagct
     4081 cgtcgtccag cttttcgcgg gtggacttgt actccggata ccgctccgcc cggaacgatg
     4141 tgccggcgtc gttgatccag gcgacgtagt cggggcggta cttctcccgc agccgcatga
     4201 ggaagttcac cacgccccag gccgccgagg tgttctcgcc cttgctggtc cggagcggcc
     4261 gcgcgatcat cgcgtagaat gcccggtaga tgagggcgta gccatcgacc aggaacaggc
     4321 gcggaggggt gtggttgggc atcgttcggg gaaggtaggc ggaaggcggt aaggcggtag
     4381 ggcggtaggg cggtagggcg gtaaggcggt aaggcggtac cgcccctacc gcccttaccg
     4441 ccttaccgcc ttaccgccta cccctgccgt cgcacccgcg agagaatccg ctcgtattcc
     4501 gcccgcgatc ccggggtcag ccggaggcgg ccgaagccgg tctcgtcctg gaagtagatc
     4561 tccagccggt gggtgagata ggtccagcgg atgatgcgac tggccgtgcc gggggtgctc
     4621 tcgacgctct cgtcgggcgg gccgagggtg acgaagacct cgccgcgatc ggtgcgccag
     4681 ccggggacgc cctcgtcctt gaaccgctga ttggccgcgt tcacccgccc gaagtactgg
     4741 ttgagcgctt cgttctccgg cgtgccggca ttggggtcgg tggaggcgta gaaatcgcgc
     4801 cacagccggg cgcgctcgcc ctcaggggcc cggcgcatct gggcgatccg ctcgtcctcc
     4861 ccgaaatagc gcagcaggtc gagcatctcg tcgaagttgg tcaccaccca ggcctgggtg
     4921 aacgacacca gcgccgaggc gctgcgctcc ggctccgcgc cgaccacgat ctccagctca
     4981 cccagcgaga cgctgtcggg cgcgaggcgg acgacctggc tctcgacttc cctgcccccc
     5041 cggaaccgca gcgaatcgtc gtagatggtg ttctgctgct cgtccagcac cttgaagggg
     5101 accatggtcg gccccgcgaa ggagtagccc tcgacgtagg ccagcagcgt gtcactcccg
     5161 tagccgacgg cgccgcgcgg gttgagcacg agcgtgaggg gatcggcaag acttccccgc
     5221 cccgtagcct ggtacgtgag caccggcgcg gaataggtgg ccctgccgaa gttcggcgcc
     5281 gtgtactctc cggtggcgct gctctcggcg gtggaagacg cgtcgcggac ggtggccgtg
     5341 accttgtagg tgcccggcag cagccggagg acctgctgga agaggacgct ttcgtccgcg
     5401 cgctgggtct cctggaaggt ggcgacccgg accagctcct cgcgggccag gtccaccggc
     5461 ggcgcgcctt cccgcttgaa ggagagagcc acccgatatc gggcgacgaa cgcgttccct
     5521 tcccgctgaa acgcgaaggc ccggttctcg agggagagac cgagcaccgc gatgaccgag
     5581 tcggccgggc cggcggcgaa cgccaccgtt cccacgaacg gcatggggtc gccggccgcg
     5641 aggcgtccca ggcgctggta gaactcggtg gtgttgagga ggcgggtcag tgcttcggtg
     5701 ggtctcggct gctcctcgct gccgacccgt ttccagctcc cgcagccgat ggcggaggcc
     5761 gcgaggacgg aaaccgccac gagaacgagc cgacgcatgt ctgacactcc cggctgagcc
     5821 gatgggaccc gcaccgcggg ttgcgaacgt tagtggcgcc gaaggagatg cgtcaagcgt
     5881 ccaacttgct gcaccgtgag agattaacta gcttggcgat cccatgagcg ctgacaatct
     5941 ggtcggtcgc acggtggccg gttaccacct cgcgaaatac atcggcgagg gcgggacggc
     6001 gacggtctat cgagccgagc acgcggagcg cggcgagtcg gccgtgaaga tcctgcggcc
     6061 gcggctcgcc agcgatccca tcgccgtcaa gcgattcctg cgtgaggcgg a
//
LOCUS       DASUYN010000167         2810 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_937005, whole genome shotgun sequence.
ACCESSION   DASUYN010000167 DASUYN010000000
VERSION     DASUYN010000167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2810)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2810)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2810
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_937005"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(78..1562)
                     /locus_tag="VF061_03240"
     CDS             complement(78..1562)
                     /locus_tag="VF061_03240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEX6668545.1"
                     /translation="MSLFLRKDVSALQAELAADQSLKRVLGPVNLVLLGIGAVIGAGI
                     FVLTGQAAANYAGPGIVISFILAGTACAFAGLCYAEFAAMIPIAGSAYTYGYATLGEL
                     FAWIIGWDLILEYLFAASTVAVGWSGYVVSFLKDLGIVIPPEYTSAPYTHTTPTDAGL
                     NIWRLFTEGWSATGAVLNLPAMFIVGLLTVLLIIGISESATFNNLAVAIKVTVVLLFI
                     AFGIAYVNADNWTPFVPPAEGPGKYGWDGIVRGAGVIFFAYIGFDAVSTAAQECRNPQ
                     KDMPIGILGSLAICTVLYIAVALVLTGIVHYSELNVPDPIAVGINAAGEQLTWLRPII
                     KIGAIAGLSSVILVMLLGQPRIFYTMSKDGLLPPVFASVHPKFRTPWLASAVTGGVAM
                     VFAGLLPIGLLGELVSIGTLLAFAIVCAGVLVLRYTDPDLPRPFRTPLVPLVPLAGVG
                     ACLYLMLGLPVDTWARLIVWMGLGLAIYFLYGKRHSKVQLAANR"
     gene            complement(1692..>2810)
                     /locus_tag="VF061_03245"
     CDS             complement(1692..>2810)
                     /locus_tag="VF061_03245"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HEX6668546.1"
                     /translation="MRRFKISGVPIVDGQGRLIGIITNRDLQFERNLDQPIRDAMTKD
                     RLITAPVGTSLDDAERILAQHRIEKLPVVDANGVLKGLITVKDIFKRREHPNANKDQH
                     GRLRVAAAVGGGSDASPRARALVDAGVDVLVVDSAHGHSEGVLATVSQLREAFPDVQL
                     VAGNVATEAGARELVRRGVDAVKVGIGPGSICTTRVVTGVGVPQVTAVMDAMRGAEDV
                     PIIADGGIKYSGDVVKALASGASSVMMGSMLAGTEESPGESVLAEGRRYKMIRGMGSL
                     SAMQDGSADRYFQEGEMAPSKLVPEGIEGRVPYKGPVADVIFQMVGGLRSGMGYCGVS
                     SIPQLQCEVEMVQITSAGLRESHPHDVTITREAPNYSA"
BASE COUNT          485 a          940 c          953 g          432 t
ORIGIN      
        1 agggagcaat gccgggcatg gtcgccttca ctccgctcag gctgacaatt ccgatgatcc
       61 gccttagcgc cttgggccta ccggttcgct gccagctgca ccttcgagtg ccgcttcccg
      121 tacaagaagt agatcgccag cccgaggccc atccagacga tgagccgcgc ccaggtgtcg
      181 acgggcagtc ccagcatcag atagagacag gcgccgacgc cggcgagggg caccagcggc
      241 accagcggcg tgcggaaggg ccgcggcagg tccgggtcgg tgtagcgcag caccagcacg
      301 ccggcacaga cgatcgcgaa tgccagcagg gttccgatgg acaccagctc gcccagcagc
      361 ccgatcggga gcaggccggc gaacaccatg gccacgccgc cggtgaccgc gctcgcgagc
      421 cacggggtgc ggaacttggg atgcaccgag gcgaagaccg gcgggagcag gccgtccttc
      481 gacatggtgt agaagatccg gggctgcccc aggagcatca ccaggatgac cgacgacagg
      541 cctgcgatgg cgccgatctt gatgatcggc cggagccagg tcagctgctc gcccgcggcg
      601 ttgatgccga cggcgattgg atccgggacg ttgagctcgg agtaatggac gatgccggtg
      661 agaaccagcg cgaccgcgat gtagaggacg gtacagatgg cgagcgagcc gaggatgccg
      721 atcggcatgt ccttctgcgg gttgcgacac tcctgcgccg ccgtggagac ggcgtcgaat
      781 ccgatgtagg cgaagaagat gacgcccgcg ccgcggacga tgccgtccca gccgtacttg
      841 ccgggacctt ccgccggggg aacgaagggc gtccagttgt cggcgttcac gtaggcgatg
      901 ccgaaggcga tgaacagcag caccaccgtg accttgatgg cgaccgccag gttgttgaag
      961 gtcgccgact cgctgatccc gatgatcagg aggacggtga ggaggccgac gatgaacatc
     1021 gccggcaggt tgagtaccgc gcccgtcgcc gaccacccct cggtgaagag ccgccagatg
     1081 ttgaggccgg cgtcggtcgg tgtggtatgg gtgtacgggg cggaggtgta ttcgggcggg
     1141 atgacgatgc cgaggtcctt gaggaaagag accacgtagc ccgaccagcc caccgccacg
     1201 gtggacgccg cgaacaggta ctccaggatc aggtcccatc cgatgatcca ggcgaacaac
     1261 tcccccagcg tggcgtatcc gtaggtgtac gccgagcccg cgatcggaat catggccgcg
     1321 aactccgcgt agcacaggcc ggcgaaggcg caggccgtcc cggccaggat gaaggagatc
     1381 acgatcccgg ggccggcgta gttggcggcg gcctggcccg tcagcacgaa gatccccgcg
     1441 ccgatgaccg cgccgatgcc gaggaggacc aggttgaccg gtcccagcac acgcttgagg
     1501 ctttgatccg cggcgagctc ggcctggagt gcggacacgt ccttgcggag gaagaggctc
     1561 atgagttgct cattggtttg ggaggccggc tgcaagaaag cgtgaaaggc aaaaagtgaa
     1621 aagtgacagg gagggctcga tcccccattt cactctttac gtttcacttt tcacgcggtt
     1681 acacagctgc gtcaggcgct gtagttcggc gcttctctcg taatggtcac gtcgtgcggg
     1741 tgcgactcgc gaaggccggc gctggtgatc tgcaccatct cgacctcgca ctgcagctgc
     1801 gggatggagg acaccccgca gtatcccatg ccgctccgga gcccgccgac catctggaag
     1861 atcacgtcgg ccaccgggcc cttgtacggc acccgtcctt cgatcccctc gggcaccagc
     1921 ttcgagggcg ccatctctcc ttcctggaag tagcggtcgg cggacccgtc ctgcatggca
     1981 gaaaggcttc ccatgccccg gatcatcttg tagcgccgcc cctcggccag gaccgactcg
     2041 ccggggctct cctcggtgcc ggcgagcatg gagcccatca tcacggagga cgcgccggac
     2101 gcgagcgcct tcaccacgtc gcccgagtac ttgatgccgc catcggcgat gatcgggacg
     2161 tcctccgccc cacgcatggc gtccatcacc gccgtcacct ggggaacgcc gaccccggtg
     2221 accacgcgcg tggtgcagat gctgcccggc ccgatcccca ccttcaccgc gtccaccccg
     2281 cgccggacca gctcccgcgc cccggcctcg gtggccacgt tgcccgcgac cagctggacg
     2341 tcggggaagg cctcccgcag ctgggagacg gtcgccagca cgccctcgct gtgcccgtgg
     2401 gcggagtcca ccaccaggac gtccacgccg gcgtccacca gcgcgcgcgc ccgcgggctc
     2461 gcgtcggagc cgccgccgac ggcggccgcc acgcggagcc ggccgtgctg atccttgttc
     2521 gcgttggggt gctcgcggcg cttgaagatg tccttgaccg tgatcagccc cttgagcacc
     2581 ccgttcgcat ccaccaccgg cagcttctcg atacggtgct gcgccaggat ccgctcggca
     2641 tcatcgaggc tggtgccgac cggcgcggtg atgagccggt ccttggtcat cgcgtcgcgg
     2701 atcggctggt cgaggttgcg ctcgaactgg aggtcgcggt tggtgatgat gccgatcagc
     2761 cgtccctgcc cgtccacgat cggaacgccg gagatcttga agcgccgcat
//
LOCUS       DASUYN010000168         4938 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1157122, whole genome shotgun sequence.
ACCESSION   DASUYN010000168 DASUYN010000000
VERSION     DASUYN010000168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4938)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4938)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4938
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1157122"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..306
                     /locus_tag="VF061_03250"
     CDS             <1..306
                     /locus_tag="VF061_03250"
                     /inference="COORDINATES: protein motif:HMM:NF020683.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose oxidase early set domain-containing
                     protein"
                     /protein_id="HEX6668547.1"
                     /translation="FKGVRPAITGLSKTTVGYGETFTVNTAFAAQITAVRWIRLGSVT
                     HAFDANQRANTLTFSRGSGLVRVTAPANARRAPPGHYLLYLLNRNGVPSAGRVVMVR"
     gene            complement(313..1305)
                     /locus_tag="VF061_03255"
     CDS             complement(313..1305)
                     /locus_tag="VF061_03255"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEX6668548.1"
                     /translation="MTHPSDRHYRLLIGTAAFVIIAAGIREAAELLNSILLAMLLTVT
                     VVPAFDALRRRGVPKGLAVVFTSLLLAGVLVVLLGLLGLSGTRLIQVLPEYQERALSL
                     RNDLERLLLARGIQPERILSLEVVDPNRLLGLAAGFLSGLGQALSQVLLLILIVAFFL
                     AERGIRDQTFDPGGTAARVAGDVRQYLVITSLTGLGFSLLVYILMLVVGTDLALVWAV
                     LAFIMNFVPNVGIILSVVPPLLLTLLELGWQRAVVVLAGFLVLNFVVDNLVKPRFMQS
                     GLDVPPLVGLLSLVVWAYLLGPIGTILALPLTIAIRRVLEDADLEVPGLSRGAS"
     gene            complement(1309..2607)
                     /locus_tag="VF061_03260"
     CDS             complement(1309..2607)
                     /locus_tag="VF061_03260"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX6668549.1"
                     /translation="MRASSHPAVARVSRRLIPFLFLLYILNFLDRVNVGFAALEMNRD
                     LGFGPAVYGFGAGVFFLGYCLFEVPSNLVLYRTGARLWIARIMVTWGLAASAMMLVHA
                     PWSFYLLRFLLGVAEAGFFPGIIYYLTWWYPARERARAYAWFLAAIPVSGVIGGPLSG
                     ALLGLDGWLGLRGWQWLFLLEGIPSVLVGFAVLWLLPDRPRDARWLPPAERAWLEETL
                     EAERAERVMSHGASLRQALGNPVVWWLGLSYFLLVVALYGFALWLPQLVKASGDFSNF
                     EVGVITAIPYAAAAVGMVLVGRSSDRTGERHLHLALPALAGALGFLAVTRTGSTGLLV
                     VALSLTAFGVLGWLGPFWALPTAFLREQAAAGGIALINSMGAVGGFVGPYLIGHVRER
                     TGEFAPGLLLLAGFLVAAVVIVLALRAKPGLDGGGGERRG"
     gene            complement(2616..4043)
                     /locus_tag="VF061_03265"
     CDS             complement(2616..4043)
                     /locus_tag="VF061_03265"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPASM domain-containing protein"
                     /protein_id="HEX6668550.1"
                     /translation="MALASSRYSFAIPVRDGTLLYNAGSGAVIRLAGGDAGRIADCLA
                     GPPQPIAPEEWPPQLVLQLIEGGFLVPAAMDEVGIIRERYREARRRTPMTLTITTTMD
                     CNLGCYYCYEERSGAQLEPRDIGGILRLAESRLKTSGRPTLHVDWYGGEPLLNLTALE
                     TASDALQKLCARLGVVYGASIVSNGTAWPEDVGSFVATHALRQVQISFDGLASHHDKR
                     RRYRRGRAPEAGASSFDQAAGVVDRLLDHVRVDVRLNLDHGNQGDILPFIAFMRERGW
                     FDRPFPAVFQPARISAFSDRSAFLRPRELPGEVFEELRAQAKAAIGGGIAVEESEVPD
                     GFPYPRTSVCAALADDSVVIGADGGLYRCGLQVGEPHRRVGSLPQPSSRALPVLSPQP
                     DTEAEDRAWWNAFDPTLLPTCRRCSFLPVCWAGCPKRHLDRDSHAIAEQGAYWRRNLA
                     RLVADGVREELVQPVIFDEASQFRD"
     gene            complement(4030..4290)
                     /locus_tag="VF061_03270"
     CDS             complement(4030..4290)
                     /locus_tag="VF061_03270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668551.1"
                     /translation="MAKRKSTKKSSIQFIVSKDKKPRVPLKPGMRLDVVSTVLVGPDL
                     KRAKNIGARLCGGSGTCMALVDLGSDVINPARGTRRGSRGTR"
     gene            4698..4907
                     /locus_tag="VF061_03275"
     CDS             4698..4907
                     /locus_tag="VF061_03275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock domain-containing protein"
                     /protein_id="HEX6668552.1"
                     /translation="MRTTGTVKWFNDAKGFGFITPEDGQKDCFVHHSAIQGQGFKSLA
                     EGERVEFDIVQGQKGPAAENVVKLQ"
BASE COUNT          882 a         1692 c         1721 g          643 t
ORIGIN      
        1 ttcaagggcg tgcggccggc gatcaccggg ctctccaaga ccaccgtcgg ctacggcgag
       61 accttcacgg tgaacaccgc gttcgcggcg cagatcacgg cggtgcgatg gatccggctc
      121 ggatcggtca cccacgcgtt cgacgccaac cagcgggcca acacgctcac cttctcgcgg
      181 ggctcgggat tggtgcgcgt caccgccccg gcgaacgcca ggcgcgcgcc gccgggacac
      241 tatctgctgt atctgctcaa ccggaacggc gtgccgtcgg cggggcgggt ggtgatggtc
      301 cggtaggcta cctcaggacg cgccccggct gagtcccggc acctccaggt cggcgtcctc
      361 gagcacccgc cggatcgcga tggtcagcgg gagcgccagg atcgtcccga tgggcccgag
      421 cagataggcc cataccacca gggagagcag gcccaccagg ggaggtacgt ccagcccgct
      481 ctgcatgaac cgcggcttga ccaggttgtc caccacgaag ttgagcacca ggaacccggc
      541 gagcaccacc accgcccgct gccagcccag ctcgagcagg gtgagaagga gcggcggcac
      601 caccgacagg atgatgccga cattgggcac gaagttcatg atgaaggcca gtaccgccca
      661 caccagcgcg aggtcggttc ccaccaccag catgaggatg tagaccagga gggagaagcc
      721 gaggccggtg agcgaggtga tgacgaggta ctggcgaacg tcgcccgcca cccgggcggc
      781 ggtcccgccg gggtcgaaag tctggtcccg gatcccccgc tcggccagga agaaggccac
      841 gatcaggatg aggagcagga cctggctcaa tgcctggccc agcccggaaa gaaatcccgc
      901 cgccagcccc agcaggcgat tcgggtccac cacctcgagt gagaggatcc gctcgggctg
      961 gatgcctcgg gcgagcagca agcgctcgag gtcgttcctc agggacaggg cccgctcctg
     1021 atactcgggg agcacctgga tgagccgggt gcccgagagt cccaggagcc cgagcagcac
     1081 gaccagcaca ccggccagga gcaggctggt gaagacgacc gccaggccct tcggcacccc
     1141 ccggcggcgc agcgcgtcga acgccggcac cacggtgacg gtgaggagca tggcgagcag
     1201 gatgctgttg agcagctcgg ccgcttcccg aatgccggcc gcgatgatga cgaaggcggc
     1261 ggtgccgatc agcaggcgat agtgtcggtc ggagggatga gtcatgggtt accctcgcct
     1321 ctcccctccg ccgccgtcaa gtcccggctt cgcgcggagc gccaggacga tgacgacggc
     1381 ggccaccagg aaacccgcca ggagcagcag tccaggggcg aattccccgg tccgctccct
     1441 gacgtggccg atcaggtacg gtcccacgaa gccgcccacc gcacccatcg agttgatcag
     1501 cgcgatcccg ccggccgccg cctgctcccg gagaaaggcg gtgggcaggg cccagaaggg
     1561 ccccagccag ccgagcacgc cgaacgcggt gagcgacagc gcgacgacca ggaggccggt
     1621 gctcccggtg cgggtgaccg cgaggaagcc cagcgcgccc gcgagcgcgg gcagggcgag
     1681 atggagatgg cgctcgccgg tgcggtcgga gctccggccc accaacacca tcccgacggc
     1741 cgcggccgcg taggggatcg cggtgatgac gccgacctcg aagttgctga agtcgccgct
     1801 ggccttcacc agctggggga gccagagggc gaagccgtag agggcgacga ccagcaggaa
     1861 gtagctcagg ccgagccacc acaccaccgg gttgccgagg gcctgtcgca ggctcgcgcc
     1921 gtgggacatg acccgctcgg cccgctccgc ctccaaggtc tcctccagcc acgcccgctc
     1981 cgccggcggg agccagcgcg cgtcgcgggg gcggtcgggc agcagccaca ggaccgcgaa
     2041 gccgaccagg accgagggga tgccctcgag caggaagagc cactgccagc cccgcagacc
     2101 gagccacccg tcgaggccca gcagcgcccc cgagaggggc ccgccgatca ccccggacac
     2161 cgggatcgcc gcgagaaacc aggcgtaggc ccgggcccgt tcccgggcgg gataccacca
     2221 ggtgagatag tagatgatcc cggggaagaa gccggcctcc gccacaccca gcaggaagcg
     2281 gagcaggtag aagctccagg gcgcgtgcac cagcatcata gccgaggccg ccagccccca
     2341 ggtcaccatg atgcgcgcga tccagagccg ggccccggtc cggtagagca ccaggttgct
     2401 ggggacctcg aacaggcagt agccgaggaa gaagacgccg gcgccgaagc cgtacaccgc
     2461 ggggccgaag ccgaggtcgc ggttcatctc cagggccgcg aagccgacgt tgacccggtc
     2521 gaggaagttg aggatgtaga gcaggaagag gaacggaatc aggcggcggg agacgcgcgc
     2581 gacggcaggg tggctgctgg cgcgcacgat ggggatcagt cgcggaactg ggatgcttcg
     2641 tcgaagatca cgggctggac cagctcctcc cgcaccccgt cggccacgag tcgcgcaaga
     2701 ttccgtcgcc agtacgctcc ctgttccgcg atggcgtggc tgtcccggtc caggtgccgc
     2761 ttggggcacc cggcccagca caccggcagg aacgagcacc gccggcaggt cggcaggagc
     2821 gtggggtcga acgcattcca ccaggcccgg tcttcggctt cggtatcggg ttggggcgag
     2881 aggaccggca acgcccgcga cgaaggctgt ggcaggctgc cgacgcgccg atgcggttcc
     2941 cccacctgga gtccgcagcg gtacagcccg ccatccgccc cgatcaccac ggagtcgtcg
     3001 gcgagcgccg cgcagaccga ggtgcgggga tagggaaacc cgtccgggac ctcggactct
     3061 tccacggcga tgccgccgcc gatcgccgct ttggcctggg ctcggagctc ctcgaacacc
     3121 tcacccggca gctcccgcgg tcgcaggaag gcggaacggt cggagaacgc cgagatgcgc
     3181 gccggctgaa agaccgcggg gaaggggcgg tcgaaccatc cacgctcccg catgaacgcg
     3241 atgaacggca ggatgtcgcc ctggttgccg tgatccaggt tcagtcggac gtccacccgg
     3301 acgtgatcga gcagacgatc gaccaccccg gctgcctggt cgaaggacga ggcacccgcc
     3361 tcgggagcgc ggccccgccg atagcggcgg cgcttgtcgt gatgggacgc gaggccgtcg
     3421 aaggagatct ggacctgtcg cagcgcgtgg gtcgcgacga aggagcccac gtcctcgggc
     3481 caggccgttc cgttggagac gatggaagct ccgtagacca cgccgaggcg cgcgcacagc
     3541 ttctggagcg cgtccgaagc ggtctccagc gcggtcaggt tgagcagcgg ctccccgcca
     3601 taccagtcga cgtgcagcgt gggccggccg ctcgtcttca agcgcgactc cgcgagccgc
     3661 aggatgccgc cgatgtccct cggctcgagc tgggcgcccg agcgctcctc gtagcagtag
     3721 tagcagccga ggttgcagtc catcgtggtg gtgatggtca gggtcatcgg cgtgcgccgg
     3781 cgcgcctccc ggtagcgctc gcgaatgatc ccgacctcgt ccatcgccgc ggggacgagg
     3841 aagcctccct cgatcagctg caggaccagc tgcggaggcc actcctcggg cgcgatcggc
     3901 tgcggcggcc cggccaggca gtcggcgatc cggcccgcat cgccgcctgc cagtcggatc
     3961 acggcgcccg agccggcgtt gtacagcagc gtcccgtcgc gaaccgggat cgcgaagctg
     4021 tatctcgagc tagcgagtgc cacgactgcc gcgccgcgtt ccgcgggcgg gattgatgac
     4081 atcgctgccg aggtccacca gcgccatgca ggtgcccgac ccaccgcaga gccgcgcccc
     4141 gatgttcttc gcccgcttga gatccggccc caccaggacg gtgctcacca catccagacg
     4201 catgccgggc ttgagcggaa cccggggctt cttgtccttg gagacgatga actggatcga
     4261 ggacttcttg gtggacttgc gcttggccat aggggactcc cagtgagggg agcttcaaca
     4321 ttcgtccccc cgggtggccc gcaaggcctc ggatgcgaca agaagggccc caatcgcgac
     4381 acgcccgggt cgcgaccccg atagttgccg tagtggcaag catcgttgca cttactaagc
     4441 gcttgactcc gttgtcaccc cgagcgcagc gaagggggcc atccccgtca tggtcccctt
     4501 cactgcgttc agggtgacac gtgtcgcttg ccgggcgtgg tacttctgcc tatattcatg
     4561 ctcacatcgg gagcgctcgc gcgaccgaat ccaacgtgat cagggagggg ctggcgttga
     4621 cgccggcccc tttttcgtta gtcgggcgtg cgccgcatgt ccccactccg atcacaccac
     4681 tgcaaggagc gggaacaatg cgtaccaccg gcacggtgaa atggttcaac gacgccaagg
     4741 gcttcggatt catcaccccc gaggatggcc agaaggactg cttcgtccat cattccgcga
     4801 tccagggtca gggcttcaag agcctggccg agggcgagcg ggtcgagttc gacatcgtgc
     4861 agggccagaa gggccccgcc gcggagaacg tcgtcaagct gcagtagccc gaatcaccga
     4921 acgccgcatg gctcggtg
//
LOCUS       DASUYN010000169         4047 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_496473, whole genome shotgun sequence.
ACCESSION   DASUYN010000169 DASUYN010000000
VERSION     DASUYN010000169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4047)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4047)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4047
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_496473"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..393
                     /locus_tag="VF061_03280"
     CDS             <1..393
                     /locus_tag="VF061_03280"
                     /inference="COORDINATES: protein motif:HMM:NF013231.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEX6668553.1"
                     /translation="WVRYLRKTEGISPSQYNLLRILRGAGVNGRTMSEISERMINRDP
                     DVTRLADRTVKLGLARRMRDEVDRRVVKLFITEKGLEMLGRLDEAVVVFLNQALGALG
                     PKRLRMLRDLLGEARAGFGPFPVPARVK"
     gene            474..1355
                     /locus_tag="VF061_03285"
     CDS             474..1355
                     /locus_tag="VF061_03285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668554.1"
                     /translation="MSTAAARIAVLAAALGLTGAAVVRQSPATAERDGSTTLQGPEAR
                     VGNGTGRIFVELGPGGEPRAIGIALTESALAGLATRMNTTSRCFDKNGDGTLSHGECL
                     GDYQTDLALPAGARDLQLPFRWATVNWNPEGHLPPAPAVWSAAHFDFHFFLVDPELIH
                     GIRPGPCGEFIHCDDAKRAGLPLAPPHAPEGYIDVGAAVPGMGNHLVDSRDPELADPQ
                     LGFSHTFIYGSYDGKLIFLEPMVSHAFLSRRAPECRPVRAPRAYATAGYYPTTYCVRH
                     DAASGTYRVTLEGLVRK"
     gene            1365..2807
                     /locus_tag="VF061_03290"
     CDS             1365..2807
                     /locus_tag="VF061_03290"
                     /inference="COORDINATES: protein motif:HMM:NF012927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668555.1"
                     /translation="MWHPHPFVKHAIPATRPPTADEASGSRWFSPLRSGRLALAERTW
                     VPAMVPWRATDDGFVTPEVLAWYERFARGQPGVLVVEATGIRDIPSGPLLRIGDDRFI
                     PGLAELVRTVREASGGRTRLFIQIIDFLRIRRRPEPERFFREFLVLSDRHRSLLPGSD
                     DAVREALARLPEAEWPRFLDERELESLRFGERERVTDTWLPHIRELPRVLPELFARAA
                     ARAERAGFDGVELHYAHAYTMASFLSALNHRDDGYGGSREGRVRLPLEVHAAVRDAVG
                     NRFVVGCRFLAEECIAGGYGADDAAWFGAELATAGVDYLSLSRGGKFEDAKQPRVGWA
                     RYPYTGPSGYECMPTVRSDQRGPFGRNAAATRRVREAVRAAGAETPVVLSGGISTFEQ
                     AEELLRTGAADVVAAARQSLADPDWFRKLRLGRGAEVRRCVYTNYCEGLDQVHKPVTC
                     KLWDHLDGRRRLTAPVWDPEPSRERPPASE"
     gene            2950..4005
                     /locus_tag="VF061_03295"
     CDS             2950..4005
                     /locus_tag="VF061_03295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668556.1"
                     /translation="MRLPPQAPRPLATTAVLVLLLAGCLAPTDPTTDVRSTPVPAEPA
                     GSIGSTRVTIDGSRFRINGNITYPGKPAQGTLMNVRMVNSVFEDTSKPSFNPVANTDE
                     FVGRMPEYVSLGVRAFTVSLQGGYPGYEGARNSGFLRNGELKSTYLSRVARVIERADA
                     LGAVIILSLYYQRQDQYLDGEPAVRAGVVNAVNWIKSKGYKNVILEVVNEYGHRGFDH
                     AILRSDAGVADLIRLAKSRHSALPVSASSLRNGQTTPRVAAAADLILVHFNALAVSEI
                     PAKVRALRDASPNKPIVCNEDSRTGSAAASAASATVQAGASYGLMLERRNQHYDFEFL
                     GRSDDRTAYDRYVALTR"
BASE COUNT          592 a         1437 c         1413 g          605 t
ORIGIN      
        1 tgggtccgct acctccggaa gacggagggg atctccccca gccagtacaa cctgctccgc
       61 atcctgcgcg gggccggggt caacgggcgg accatgagcg agatctccga gcggatgatc
      121 aaccgcgacc ccgacgtcac ccggctggcc gaccgcacgg tcaagctcgg cctcgcgcgc
      181 cgcatgcggg acgaggtgga ccgccgggtc gtgaagctct tcatcaccga gaaggggctc
      241 gagatgctcg gccggctcga cgaggcggtg gtcgtgttcc tgaaccaggc gctgggcgcc
      301 ctcggcccca agcggctccg gatgctgcgg gacctgctcg gcgaagcccg cgccggcttc
      361 gggcccttcc ccgtcccggc cagggtgaag tagccggctt ttcgcggcga gatacttgtt
      421 gccacgactg ttgtcgtcac gttcacaatc cagaggagag gagggtgtag ccgatgtcga
      481 ccgccgcagc caggatcgcg gtcctcgcag ccgcgctggg gctcaccgga gccgccgtcg
      541 ttcgccagtc tcccgccacc gcggagcggg atggatccac gacgctccag ggtcccgagg
      601 cccgcgtcgg gaacggcacg gggcggatct tcgtcgagct ggggccgggc ggcgagccgc
      661 gcgccatcgg tatcgcgctc accgaatcgg ccctcgccgg cctggcgacc cggatgaaca
      721 ccaccagccg ctgcttcgac aagaatggcg acggcaccct cagccacggc gagtgcctcg
      781 gcgactacca gacggacctc gccctgccgg ccggcgccag ggaccttcag ctccccttcc
      841 gctgggccac cgtgaactgg aatcccgagg gccatctgcc accggccccc gcggtgtgga
      901 gtgcggcgca cttcgatttc catttcttcc tggtggaccc cgagctgatt cacgggatcc
      961 ggcccgggcc gtgcggcgag ttcatccatt gcgacgacgc caagcgggcc ggcctgcccc
     1021 ttgccccgcc gcacgccccc gagggctaca tcgatgtcgg cgccgccgtt ccgggcatgg
     1081 gcaatcacct ggtggattca cgggaccccg agctcgccga tccgcagctc ggattctccc
     1141 acaccttcat ctacggcagc tacgacggca agctgatctt tctggagccg atggtgtcgc
     1201 acgcctttct ctcccgacgg gcgccggagt gccggccggt ccgggctccg cgcgcctatg
     1261 cgacggcggg gtactatccc acgacgtact gcgtgcgcca cgacgcggcg tccgggacct
     1321 accgggtgac gctggaggga ttggtccgca agtaacttcc ctccatgtgg cacccccatc
     1381 ccttcgtcaa gcatgcgatc ccggcgactc gtccgcccac tgcggacgag gcgtcgggat
     1441 cgcggtggtt cagcccgctg cgctccggcc ggctggcgct ggcggagcgc acctgggtac
     1501 cggccatggt gccgtggcgc gcgaccgatg acgggttcgt cacccccgag gtcctggcct
     1561 ggtacgagcg cttcgcgcgg gggcagccgg gggtgctggt cgtcgaggcg accgggatcc
     1621 gggacattcc cagcgggccg ctgctcagga tcggagacga ccggttcatc cccgggctgg
     1681 cggagctggt gcgtaccgta cgcgaggcga gcggtggacg gacccggctg ttcatccaga
     1741 tcatcgactt cctccggatc cgccggcggc cggagccgga gcgattcttc cgcgagttcc
     1801 tggtgctctc cgaccggcac cgctcgctcc tgcctgggag cgacgacgcc gtgcgggaag
     1861 cgctggcccg cctgccggaa gcggagtggc cccggttcct cgacgagcgt gagctcgaga
     1921 gcctgcggtt cggcgagcgg gagcgggtca ccgacacctg gctgccccac atccgcgagc
     1981 tgccgcgggt cctgccggag ctgttcgccc gggcagccgc ccgcgcggag cgggcggggt
     2041 tcgacggcgt cgagctgcac tacgcccacg cctacaccat ggcatccttt ctctccgcgc
     2101 tgaaccatcg cgacgacggc tacggaggat ctcgcgaggg tcgcgtgcgg ctgccgctcg
     2161 aggtccacgc cgcggtgcgg gacgcggtgg ggaaccggtt cgtggtgggc tgccggttcc
     2221 tggcggaaga gtgcatcgcg ggcggctacg gtgccgatga cgcggcgtgg ttcggcgcgg
     2281 agctggccac ggcaggagtg gactatctct cgctctcccg cggcgggaag ttcgaggacg
     2341 ccaagcagcc gcgagtggga tgggccaggt atccctacac cggacccagc gggtacgagt
     2401 gcatgcccac cgtccgatcg gaccagcggg gcccgttcgg ccggaacgcc gcggccacca
     2461 ggagggtgcg ggaggcggtg cgcgcggcgg gagccgagac gccggtcgtc ctctcgggcg
     2521 ggatctcgac gttcgagcag gcggaggagc tgctccggac cggcgcggcg gacgtcgtcg
     2581 cggcggcccg gcagagcctc gccgatcccg actggttccg aaagctccgg ctcggccggg
     2641 gcgccgaggt gcgccgctgc gtctacacca actactgcga gggtctcgac caggtgcaca
     2701 agccggtgac ctgcaagctc tgggaccacc tcgacggccg gcgccgcctc accgcgccgg
     2761 tgtgggaccc tgaaccttcg cgggagcggc cgccggcctc ggaatgactc acccgcgccg
     2821 cgcggtgatg ctcgtcatag ctcgaagcag tacagaagcg gagcttggca gccccggatg
     2881 gtcacgggag tcgcggggcc aggcatggcg ccaggtgcgg gcttcctgcc ggtatacaat
     2941 ggagtccgta tgcgccttcc gccccaggcg ccgcgtccgc tagccacgac cgcggtgctc
     3001 gtccttctcc tcgccggctg cctcgcgcca accgatccga caaccgatgt ccgcagtacg
     3061 ccggtccctg cggagcccgc cgggtcgatc gggagcacgc gggtcaccat agacggcagc
     3121 cggttccgga tcaacggcaa catcacctac ccgggaaagc ctgcccaggg caccctgatg
     3181 aacgtccgca tggtgaactc ggtcttcgag gacacctcca agccctcgtt caacccggtc
     3241 gccaacaccg acgagttcgt cggacggatg ccggagtacg tctcgctggg cgtgcgcgcg
     3301 ttcaccgtct ccctgcaggg cggctatccc ggctacgaag gggccaggaa ctccggcttc
     3361 ctcaggaacg gagagctgaa gtccacctac ctctcccgag tggcgcgcgt catcgagcgg
     3421 gcggacgcgc tgggcgccgt gatcatcctg agtctctact accagcgcca ggaccagtac
     3481 ctggacggcg agccggcggt acgggccggc gtcgtcaacg cggtgaactg gatcaagagc
     3541 aagggctaca agaacgttat cctggaggtc gtgaacgagt acggacaccg gggcttcgac
     3601 cacgccatcc ttcggtcgga tgccggtgtc gccgacctca tccggctggc caagagccgg
     3661 cactccgcgc tcccggtctc ggcgagctcc ctgcggaacg gccagaccac cccgcgcgtc
     3721 gccgcggcgg cggatctcat cctggttcac ttcaacgccc tggcggtgtc ggagattccg
     3781 gcgaaggtgc gcgcgctccg ggatgcctct cccaacaagc cgatcgtctg caacgaggac
     3841 tcgcgcaccg ggtcggcggc ggcttcggcg gccagcgcga ccgtccaggc aggcgcgtcc
     3901 tacggcctga tgctggagcg tcggaaccag cactacgatt tcgagtttct gggccggagc
     3961 gacgaccgca ccgcttacga tcgctacgtc gcgctgaccc gatagggccg gcgccgccca
     4021 cgcccggggg agccgcaccg ccgagtg
//
LOCUS       DASUYN010000170         2647 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_715910, whole genome shotgun sequence.
ACCESSION   DASUYN010000170 DASUYN010000000
VERSION     DASUYN010000170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2647)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2647)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2647
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_715910"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(52..1059)
                     /gene="coxB"
                     /locus_tag="VF061_03300"
     CDS             complement(52..1059)
                     /gene="coxB"
                     /locus_tag="VF061_03300"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR02866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit II"
                     /protein_id="HEX6668557.1"
                     /translation="MRRTLLRAAPVAGLTAGLAACGGARFSLEPAGPAADSIADLFWA
                     MTILGTVVFLIFCATLVWALAHRRDPVPRPTPEQDRRRTRMILLFGAALPALVLVPLL
                     FWTFDSLAAIDPRARPADLVVDVVGKQWWWEIRYRDSVPGRTFTTANELHLPVGKRVE
                     LRLTSTDVIHSFWIPELHGKTDLIPGRENVAWIEASRPGEYGGQCAEYCGLQHTTMGL
                     LVVAQPEAEYEEWAARQRSAAVTPTDSATDRGREAFLRACAYCHTVRGTPAGGRLGPD
                     LTHLASRRTLAAGLLPNTPGHLGGWIANPQALKPGSRMPRVPMSRDEFRLIHQYLLTL
                     R"
     gene            complement(1056..1547)
                     /locus_tag="VF061_03305"
     CDS             complement(1056..1547)
                     /locus_tag="VF061_03305"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX6668558.1"
                     /translation="MRATRLLPGVAAFAVACGGEETQPAPGATWLAEPIAAVRTSTLA
                     AGAPSQVPELRNPYADDPGALTQGRLLYQSFNCSGCHGGAGGGGIGPPLADADWIYGG
                     SDANIYATIVQGRPNGMPAFGPGLQGEAAWKLAAYVRSLGAPAEGQGSEGQGNREEGG
                     QGR"
     gene            complement(1544..2383)
                     /locus_tag="VF061_03310"
     CDS             complement(1544..2383)
                     /locus_tag="VF061_03310"
                     /inference="COORDINATES: protein motif:HMM:TIGR03871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEX6668559.1"
                     /translation="MKRRVLVLTATFALAGAALASDAAPERAAVWPRVLRVCADPNNL
                     PFSDSAGRGFENRLAELIAADLGAKVQYTWWAQRRGFVRNTLGAGSCDLIPGVPARFD
                     PVATTRPYYRSTYVFVSRRDLVPAIESFDDPRLRRLRVGVHLIGDDHANPPPVSALAR
                     RGIVRNVAGYTIYGDYREPNPPARLVEAVARGDVDVAVVWGPLGGYFAGRSGAPLRVT
                     PVNRPDDGPTVPFVFAIAMGVRPEDRALARAVEDVLMRRRAEVRGILKQYGVPLLADG
                     GPT"
     gene            complement(2380..>2647)
                     /locus_tag="VF061_03315"
     CDS             complement(2380..>2647)
                     /locus_tag="VF061_03315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668560.1"
                     /translation="FQVGSGIIGQPITYLGPDGTQYVAILAGVGGWAGAAALGILPDV
                     DPFIALGFANAMKDLPQYTAQGGTLYVFALDDRGRPAGGTEPSR"
BASE COUNT          368 a          987 c          958 g          334 t
ORIGIN      
        1 ttgcggtcga gccgcggcgg cctgcgcgat gcggtaccgg cttccacgcg actaccggag
       61 cgtcagcagg tactggtgaa tgagccggaa ctcgtcccgg ctcatcggca cccgcggcat
      121 ccggctgccc ggcttgagcg cctgtggatt cgcgatccag ccgcccaggt gccccggcgt
      181 gttgggcaga agcccggcgg cgagggtgcg gcggctggcg aggtgggtga ggtcgggacc
      241 gagccgtccg cccgccggcg tgccccgcac cgtgtggcag taggcacagg cccgcaggaa
      301 cgcctcccgg ccgcggtcgg tggccgagtc ggtcggcgtc accgcggccg agcgctgccg
      361 cgcggcccat tcctcgtact cggcctccgg ctgggccacc accagcagcc ccatggtcgt
      421 atgctggagg ccgcagtact cggcgcactg gccgccgtac tcgcccgggc ggctggcctc
      481 gatccaggcg acattctcac ggcccgggat caggtcggtc ttgccgtgca gctcaggaat
      541 ccagaagctg tggatgacgt cggtggaagt gagccggagc tccacccgct tcccgaccgg
      601 caggtgcagc tcgttcgcgg tggtgaacgt gcgtcccgga acactgtccc ggtagcggat
      661 ctcccaccac cactgcttgc ccaccacgtc cacgacgagg tccgcgggcc gcgcgcgcgg
      721 gtcgatggcc gcgaggctgt cgaaggtcca gaagagcaga gggacgagga cgagcgccgg
      781 cagggcggcc ccgaagagca ggatcatgcg ggtgcgacgc cgatcctgct ccggcgtcgg
      841 cctcggtacc gggtcgcggc ggtgggccag ggcccagacc agcgtcgcgc agaagatcag
      901 gaacaccacc gtgcccagga tggtcatcgc ccagaagagg tcggcgatgc tgtccgcggc
      961 ggggcccgcg ggctcgagcg agaatcgcgc gccgccgcac gcggcgagcc cggctgtcag
     1021 gccggcaacc ggcgcggccc gcaggagcgt ccgcctcacc gcccctgccc accctcttcc
     1081 cggttcccct ggccttcgct gccctgcccc tccgccggcg cgcccagcga gcgcacgtaa
     1141 gccgccagct tccaggccgc ctcgccctgc agacctggac caaacgcagg catgccgttg
     1201 gggcggccct gcacgatcgt ggcgtagatg ttcgcgtccg acccgccgta gatccaatcc
     1261 gcatccgcca gcgggggccc gatcccacca ccgcccgcgc cgccgtggca gccgctacag
     1321 ttgaacgact ggtacagcag ccgcccctgg gtcagggcgc cgggatcgtc ggcataggga
     1381 ttccggagct cggggacctg gctcggggcc ccggcggcca gcgtgctcgt gcgcaccgcg
     1441 gcgatgggct cggcgagcca ggtggctccg ggtgccggct gggtctcctc gccgccgcac
     1501 gcgacggcga aggcggccac gccgggcagc agacgcgtgg ctctcatgtc gggcccccgt
     1561 ccgccaggag cggcactccg tactgcttca ggatccctcg cacctcggcg cgccgccgca
     1621 tgagcacgtc ctccaccgcc cgggcgagcg cgcggtcctc cggccggacg cccatcgcga
     1681 tcgcgaacac gaagggcacg gtcgggccat cgtccgggcg gttcaccggg gtcacccgca
     1741 ggggagcccc gctccggccg gcgaagtagc cgcccagcgg gccccagacc acggcgacgt
     1801 ccacgtcgcc ccgcgccacc gcctcgacca gacgggccgg cggattcggc tcccggtagt
     1861 cgccgtagat ggtgtagccc gccacgttcc gcacgatgcc ccgccgggcc agtgcgctca
     1921 ccgggggcgg gttggcgtgg tcgtccccga tgaggtgcac gccgactctc agccggcgga
     1981 gccggggatc gtcgaacgac tcgatggcgg gcaccaggtc ccgccggctc acgaagacat
     2041 aggtggatcg gtagtagggc cgggtcgtgg cgaccggatc gaagcgagcc ggcaccccgg
     2101 ggatgaggtc gcaggagccg gcgccgagcg tgttgcggac gaagccacgc cgctgcgccc
     2161 accaggtgta ctgcaccttg gccccgaggt cggccgcgat gagctcggca agccggtttt
     2221 cgaagccccg gccggcgctg tcggagaacg ggaggttgtt gggatcggcg cagacccgga
     2281 gcacccgggg ccacacggcc gcgcgctccg gcgccgcgtc ggacgcgagc gccgcgcccg
     2341 ccagcgcgaa cgtcgcggtg agcaccagca cccggcgctt catcgcgacg gctccgtccc
     2401 gccggcgggc cggccccgat catcgagggc gaacacgtac agcgtgccgc cctgcgcggt
     2461 gtactgcggc aggtccttca tcgcgttggc gaagccgagc gcgatgaacg gatccacgtc
     2521 cgggaggatg cccagcgccg ccgcgcccgc ccaccccccg acgccggcga ggatcgccac
     2581 gtactgggtg ccgtcgggcc ccagataggt gatcggctgg ccgatgatcc ccgatcccac
     2641 ctggaac
//
LOCUS       DASUYN010000171         5693 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1377982, whole genome shotgun sequence.
ACCESSION   DASUYN010000171 DASUYN010000000
VERSION     DASUYN010000171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5693)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5693)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5693
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1377982"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1164
                     /locus_tag="VF061_03320"
     CDS             <1..1164
                     /locus_tag="VF061_03320"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing methyl-accepting
                     chemotaxis protein"
                     /protein_id="HEX6668561.1"
                     /translation="RQADQRRQMLWLLFMVSLVVGISIVLWTVRMVDRPLTHLVGAAE
                     RFGGGDLRPLRLGEMPTELERLARAMDDMGGRLRSVVVSVVGEASQIGTSASDFSAMS
                     EELAASSGEISTAMVKIASSAEQQVKGMEKADALLHSLRQIAEANALAATRVSELGGR
                     IQDLAARHQADVAAAGQTLLDVKEVVRTSAGQVKELTRLSEPITDFIDLIKQISTQTN
                     LLALNAAIEAARAGEHGRGFAVVAEEVRRLADSSATAAEDVAKTVQFIRHQVREVSHT
                     MEAGSAKVQGIETVAAAAARALEQIAAAVGEVHGAASEVEREAVANRRIVEDLGVRTQ
                     EVSQAASEHASASEQVTAAAEEQSASTEEMASSAGDLLQGATRLTSLMQQFKT"
     gene            complement(1154..1450)
                     /locus_tag="VF061_03325"
     CDS             complement(1154..1450)
                     /locus_tag="VF061_03325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668562.1"
                     /translation="MDPGPRPLGALEVITAHTGPATDPDGYTLMLNGVDFGALAIADT
                     LLLTNLPEAQYSIGLAGVAAHCDNGGANPRGVRVDGGRTSRVIFQVKCHPPLRS"
     gene            complement(1521..1874)
                     /locus_tag="VF061_03330"
     CDS             complement(1521..1874)
                     /locus_tag="VF061_03330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668563.1"
                     /translation="MTLLETLPGIANVLRSPVADALNNVIRAAARLSEFNVADAEELV
                     RYATRRSLMGQDEGDRLLAEVHAAQQKRLDRAADREKAQRAKARGKAKTVRPVKAVKA
                     VKKVKVKKAAKARKR"
     gene            complement(2073..2483)
                     /locus_tag="VF061_03335"
     CDS             complement(2073..2483)
                     /locus_tag="VF061_03335"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HEX6668564.1"
                     /translation="MQRYLRLITVAAGVMAAEAAPAQAQEVHEIRMVSSGKGEFRFQP
                     ASLTVRRSDVLLFRAVSGGPHSVVFEGKEVAAADRERLNDAMPRRAGALSSPLLTDGT
                     EYRVVVPPGLTAGTYRFFCLPHRAYDMKGEVTVR"
     gene            2603..2860
                     /locus_tag="VF061_03340"
     CDS             2603..2860
                     /locus_tag="VF061_03340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668565.1"
                     /translation="MGRRGIKEYRAPEALILIAADRDQKPLVCPSCGAAAVERIPQRT
                     APDDAPGGKVTLHCTACSRTAAYIPRMLNRSSLPEAPWPHT"
     gene            complement(2866..3582)
                     /gene="lepB"
                     /locus_tag="VF061_03345"
     CDS             complement(2866..3582)
                     /gene="lepB"
                     /locus_tag="VF061_03345"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: protein motif:HMM:TIGR02227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HEX6668566.1"
                     /translation="MATGTQTRSVVVWLWEWTKSIVVALVVWFFLRTFLIEAFRIPSG
                     SMENTLLIGDFLFVNKALYGAEVPIVNTRLPAVREPVRNDILVFDSVEEEGLKVVKRL
                     VGMPGDTLAMESGVLYRNGSRVDEPWAVHTDPARSEDPMQRAKMREWQLPHLVNSDTA
                     EYQPDLQDWGPIVVPSDSFFMMGDNRDSSYDGRYWGFLPRRNVRGRPLVVYFSYDASS
                     WRSLPFFTAVRWDRIFSAPE"
     gene            complement(3636..4103)
                     /locus_tag="VF061_03350"
     CDS             complement(3636..4103)
                     /locus_tag="VF061_03350"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011365628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEX6668567.1"
                     /translation="MIATGDRAPPFALTDAAGRQVALEDLAGRHVLLYFYPKDDTPGC
                     TKEACGFRDSWNELQQLGVVVLGVSPDSADSHARFAQKYRLPFPLLSDPGKEMMQEYG
                     AWGEKTRYGRTTTGVIRSTVWIGPDGRVRRHWPRVANAETHPEQVLAALRAGL"
     gene            complement(4100..5284)
                     /locus_tag="VF061_03355"
     CDS             complement(4100..5284)
                     /locus_tag="VF061_03355"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX6668568.1"
                     /translation="MTRTLAVLLLGISACSSAGGAPEGGGAGGSGGPPAMPVEAVVAT
                     SDTVVDAIIATGQIEAVHSVELRPDIEGRIAAILVREGSVVSRGQPLIKVDDAELKAE
                     VARAEAERDLARQSLTRTSELLAQKASSQSELERAEATARSTEAQHQLLKVRLDRTTV
                     RAPFTGVAGRRLVSPGDYVTTSTALMTVQTVTPQRAVFQVPERYAEQLKVGQEVTFQV
                     AALPGKEFSGRVDFVDPVVQLPGRTITVKAQVPNPRRELQAGMFIEVRLATAVRPSAV
                     VIAEDAVLPLQGTNYVWVVVDGKATRRQVELGVRTPGFVEARSGVDAGEQVVVGGQER
                     LAEGAPVAATLVDRRPASGRESVGGTTTATDTSPNGSPTAPRTDTAVAEGGAADTAGG
                     RR"
     gene            complement(5281..>5693)
                     /locus_tag="VF061_03360"
     CDS             complement(5281..>5693)
                     /locus_tag="VF061_03360"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEX6668569.1"
                     /translation="NVSSVTFRHSFPLWNNRQREIETTRARVARDVARAIREDLERVV
                     RRDVTGAYDTYQTSREAVRLALVGVQVGRENYRMQEMRYRAGASTILDLLDAQVSLAE
                     AEAGLVQARYVTRLSLARLEAMLGRRLFPNKDAP"
BASE COUNT          850 a         2025 c         1971 g          847 t
ORIGIN      
        1 cgtcaggcgg accagcgccg ccagatgctc tggctcctgt tcatggtctc gctggtggtc
       61 ggcatctcca tcgtgctctg gaccgtccgg atggtggacc gcccgctcac ccatctcgtc
      121 ggcgcggccg agcgcttcgg cgggggggac ctgcggccgc tccggctggg cgagatgccg
      181 accgagctgg agcggctcgc ccgcgcgatg gacgacatgg gcggccggct ccgctcggtc
      241 gtggtatcgg tggtgggcga ggcgagtcag atcggcacca gcgccagcga tttctccgcc
      301 atgagcgagg agctggcggc gagcagcggc gagatctcca ccgccatggt gaagatcgcc
      361 tccagcgcgg agcagcaggt gaaggggatg gagaaggcgg acgcgctgct gcacagcctc
      421 cgccagatcg cggaggccaa cgcgctggcc gccacccggg tgagtgagct cggcgggcgg
      481 atccaggatc tggccgcgcg gcaccaggcg gacgtggccg ccgccgggca gaccctgctc
      541 gacgtgaagg aggtggtccg cacctcggcc ggtcaggtca aggagctcac ccggctgtcc
      601 gagccgatca ccgatttcat cgacctgatc aagcagatct ccacccagac caacctgctg
      661 gcgctcaacg ccgccatcga ggcggcgcgg gccggcgagc atggccgcgg gttcgcggtg
      721 gtggcggagg aagtgcgccg gttggccgac tcgagcgcga cggcggcgga ggacgtggcc
      781 aaaacggtcc agttcatccg ccatcaggtg cgcgaggtct cgcacaccat ggaggcgggc
      841 tcggccaagg tgcagggcat cgagaccgtg gcggcggccg ccgcgcgggc gctggaacag
      901 atcgccgccg ccgtgggcga ggtgcatggc gccgcgtcgg aggtggagcg cgaggcggtg
      961 gcgaaccgca ggatcgtgga ggacctgggc gttcggaccc aggaagtcag tcaggcggcg
     1021 agcgagcacg cctccgcgag cgagcaggtc accgccgccg ccgaggagca gagcgcgagc
     1081 accgaggaga tggcgtcgtc ggccggggat ctgctccagg gcgccacccg gctgacgtcg
     1141 ctgatgcagc agttcaagac ctgagaggtg ggtggcactt cacctggaaa atgacccgac
     1201 tggtgcggcc gccgtcgacc cggacaccgc gagggttggc cccgccgttg tcgcagtggg
     1261 ccgccacgcc cgcgagaccg atggagtact gcgcctcggg gagattggtc agcaggagcg
     1321 tatcggcgat cgcgagcgcc ccgaaatcga ccccgttgag catgagcgtg tagccgtccg
     1381 ggtcggtggc gggcccggta tgcgccgtga tgacctccag cgcaccgagg ggacggggac
     1441 ctggatccac gggaaggtcc gcccctcccg gctcgctgga gcacgcggcg agcgcgagcg
     1501 tccagcggag tgggcgcagc ttaccgcttc ctggccttcg cggccttctt gaccttcacc
     1561 ttcttgacgg ccttcaccgc cttgaccggg cggaccgtct tggccttgcc gcgcgccttc
     1621 gcgcgctgag ccttctcccg gtcggccgcc cgatcgagcc gtttctgctg cgccgcgtgc
     1681 acttccgcga gcagccggtc gccctcgtcc tgccccatca ggctccgcct cgtcgcgtac
     1741 cgaaccagct cttcggcgtc ggccacgttg aattcggaga gccgggcggc cgcgcggatg
     1801 acgttgttga gggcgtccgc gaccgggctt cgcagcacgt tcgcgattcc cggaagggtc
     1861 tccagcaacg tcatgatctg agttccgcca agttccgatg ccacaatggc ctccttgcct
     1921 gcgtgtcacc ccgtcgtcga gccccccgaa ccgagccgaa ttctggcacg gtcgccgccg
     1981 aggcgctagt agtatcatag actactaata tcgccgaggc aagaaacaga ggccgagcgg
     2041 gtccgcccgg cctcgacagc cgtcccacct ccttatcgga cggtcacctc gcccttcatg
     2101 tcgtacgccc ggtggggcag acagaagaac cggtaagtcc ccgccgtcag gcccggcggc
     2161 acgaccaccc ggtactccgt gccgtcggtc aggagcgggc tgctgagcgc gccagcccgc
     2221 cgcggcatcg cgtcgttcag ccgctcccga tccgcggcgg cgacctcctt cccctcgaag
     2281 accacgctgt gggggccgcc gctcacggcc cggaacagga gaacgtcgct ccgtcgcacg
     2341 gtcagcgagg ccggttggaa ccggaactcg cccttccccg aggacaccat gcgaatctcg
     2401 tggacttcct gggcctgggc cggtgccgct tccgcggcca tcaccccggc cgcaaccgtg
     2461 atcaaccgga gatatcgctg catggttcag ctcctcgaat caaagggcgc gccgctgtgg
     2521 cgcgcccgtg gagactgccc taagtttagc agggtggggt cagagagtct tgggcaacca
     2581 gaccccgccg gaagggcagg ccgtgggacg caggggcatc aaggagtacc gcgcaccgga
     2641 agcgctgata ctgatcgccg cggaccggga ccagaaacct ctggtctgtc cctcatgcgg
     2701 cgcggctgcg gtcgagcgaa tcccccagcg caccgctccc gacgacgccc ctggcggcaa
     2761 ggtcacgctc cactgcaccg cctgcagccg caccgccgcc tacatccccc gcatgctcaa
     2821 ccgctcctcc ctgcccgagg ccccctggcc ccacacctga cgcgctcact cgggggcgct
     2881 gaagatccgg tcccagcgca cggcggtgaa gaacggcagt gaccgccagc tgctcgcgtc
     2941 gtagctgaaa tacaccacca gtggacgccc ccgcacgttc cggcgcggca ggaatcccca
     3001 gtaccggccg tcgtatgagc tgtcccggtt gtcgcccatc ataaagaagg aatccgacgg
     3061 aaccacgatc gggccccaat cctggaggtc gggctggtat tcggcggtgt cgctgttgac
     3121 cagatgcggc agctgccact cgcgcatttt ggcccgctgc atcgggtcct ccgagcgggc
     3181 cgggtcggtg tgcaccgccc agggctcgtc gacccgactg ccgttgcggt aaaggacgcc
     3241 gctctccatg gcaagcgtgt cccccggcat gcccaccagc cgcttcacga ccttgagccc
     3301 ctcctcttcc accgagtcga acaccaggat gtcgttccgc accggctccc gcacggcggg
     3361 cagccgggtg ttgacgatcg gcacctcggc cccgtacagc gccttgttca cgaacagaaa
     3421 gtcgccgatg aggagcgtgt tctccatgct gccggacggg atccggaacg cctcgatcag
     3481 gaaggtccgc aggaagaacc acaccacgag ggcgacgacg atggatttgg tccactccca
     3541 gagccagacg acaacggaac gggtttgggt accggtagcc atgcggacat ccattcgggt
     3601 atcggagagg ggaatatagc cccgcccgga gggcctcaga ggccggcccg caaagcggcg
     3661 agcacctgct ccgggtgggt ctccgcgttg gcgacccggg gccagtgtcg ccgcacccgg
     3721 ccgtcggggc cgatccagac cgtggagcgg atcaccccgg tcgtcgttcg gccgtagcgc
     3781 gtcttctcgc cccaggctcc gtactcctgc atcatctcct tgccgggatc ggagagcagg
     3841 ggaaacggga gccggtactt ctgggcgaag cgcgcgtgcg agtcggccga gtccggcgag
     3901 acccccagca cgacgacccc aagctgctga agctcgttcc aggagtcgcg gaacccgcag
     3961 gcctccttgg tgcagcccgg agtgtcgtcc ttggggtaga agtagaggag gacgtgccgg
     4021 ccggccaggt cctcgagggc gacctggcgt ccggcggcgt cggtcagcgc gaagggaggg
     4081 gcccggtcgc cggtcgcgat catcgccggc ccccggccgt atccgccgcc ccgccctcgg
     4141 cgaccgcggt atcggtgcgg ggtgcggtgg ggctcccgtt gggcgaggta tccgtggcgg
     4201 tagtggttcc gcccacgctt tcccgtccgc tcgcggggcg gcggtccacc agcgtcgccg
     4261 ccacgggagc cccttcggcc aggcgctcct gcccccctac cacgacctgc tcgcccgcat
     4321 ccaccccgct ccgcgcctcc acgaagccgg gggtgcggac gcccagctcc acctgacggc
     4381 gggtggcctt tccgtcgacc accacccaca cgtagttggt gccctggagc ggcagcacgg
     4441 catcctcggc gatcaccacg gcgctcgggc ggacagcagt ggcgagacgg acctcgatga
     4501 acatgccggc ctggagctcg cgacgcgggt tcggcacctg ggccttgacg gtgatggtgc
     4561 gcccggggag ctgcaccacc gggtccacga agtccacccg gccggagaat tccttgcctg
     4621 gcagggccgc cacctggaag gtgacctcct gccccacctt cagctgctcg gcgtagcgct
     4681 ccggtacctg gaacaccgcc cgttgaggcg tgacggtctg gaccgtcatc agcgcggtcg
     4741 aggtggtcac gtagtcgccc gggctcacca gccggcggcc ggcgacgccg gtgaacggcg
     4801 cgcggacggt cgtacggtcg agccgcacct tgagcagctg atgctgcgct tcggtgctcc
     4861 gggcggtggc ttcggcccgc tccagctccg actggctgga tgccttctgc gccagcaact
     4921 cgctcgtgcg agtgagcgac tgccgcgcga gatcgcgctc cgcctcggcc cgcgccacct
     4981 ccgccttgag ctcggcgtcg tccaccttga tgagcggctg ccctcgcgag acgacggagc
     5041 cctcgcgaac caggatggcc gcgatgcggc cttcgatgtc ggggcggagc tcgaccgagt
     5101 gcacggcctc gatctggccg gtcgcgatga tcgcgtccac caccgtatcg ctcgtggcaa
     5161 ccacggcctc caccggcatg gcgggcgggc cgcctgaccc gccggcgcct ccgccctccg
     5221 gcgcgccgcc ggcgctgctg caggccgaga tgcccaggag caagacggcg agtgtccgtg
     5281 tcacggtgcg tccttgttcg ggaagagtct gcggcccagc atcgcctcga gccgcgccag
     5341 cgacagccgg gtgacgtagc gcgcctgcac caggcccgcc tcggcctccg cgaggctgac
     5401 ctgcgcatcg agcaggtcca ggatggtgct cgcgccggcc cggtagcgca tttcctgcat
     5461 ccggtagttc tcccgcccca cttgcacgcc caccagggcg aggcgcacgg cttcgcggct
     5521 ggtctgatag gtatcgtagg cgccggtgac gtcgcgccgc acgacccgct cgaggtcctc
     5581 gcggatggcc cgcgccacgt cgcgggcgac ccgtgcccgc gtcgtctcga tctcgcgctg
     5641 ccggttgttc cagagcggga aggagtggcg gaaggtcacc gagctcacgt tgg
//
LOCUS       DASUYN010000172         2639 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_276191, whole genome shotgun sequence.
ACCESSION   DASUYN010000172 DASUYN010000000
VERSION     DASUYN010000172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2639)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2639)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2639
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_276191"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            95..1897
                     /locus_tag="VF061_03365"
     CDS             95..1897
                     /locus_tag="VF061_03365"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RecQ family ATP-dependent DNA helicase"
                     /protein_id="HEX6668570.1"
                     /translation="MADARRLLHRHFGYSDFRPAQAPVVQSVLAGCDTLAVLPTGAGK
                     SVCFQVPAMALGRLTVVVSPLISLMQDQVAAAEGRGIPAACLTSGLTSGEQAAVRARV
                     VEGRLRLLYLSPERLERFAPELRAAGIRPALVAVDEAHCIAEWGHDFRPSYRGLLAAR
                     YRLGRPPAVALTGSATPAVRREIARALGFPAGRYAEHLGSFDRRNLWFGVVRVADDRE
                     RLQALRRLISGDDRMAIVYAPTRSVTESVARALVVSGHRAAPYHAGLDRARRAAILDA
                     FLSDRLDVVVATCAFGMGIDKPTVRLVVHWTLPPTPESYYQEAGRAGRDGEFARCVLL
                     WHPSDADLHRRLLDVTFPPRRLLERIWRDRSKVKGVAGNVLESAERLARELRPDLGPV
                     NWEPVRRRRRHAEERLRAMEGYARERGCRRRALVGYFGEQLAACAGCDRCRAEPTSRP
                     LPRAAAERLTRLRQAVGGKSGPWGGCVLEPDVLLRLARNPPPDAATLADVPGVGPALA
                     QAYGATILGALGVEPAGTGRAGAEKGAAETALELWRAAVAREMGVPDYVILGNRALAQ
                     LALGDAGPARSIGPRFRAKFEGELRRLLGLSASP"
     gene            complement(1905..2507)
                     /locus_tag="VF061_03370"
     CDS             complement(1905..2507)
                     /locus_tag="VF061_03370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668571.1"
                     /translation="MFRRLLSPPALVLAAAACGGDAAPHADNPLAQLTAAAQQMQKAA
                     EGFTKRKPVPPVAFRELIEFLPDRVAGLKRAEPKGETTTVGSWQYSQAEVDFASADGS
                     RRVDVGIFDYAHIPFLYVPFHAILGMNVAKESTDGYQRSTKIEGYPGFEEWNRSGTSE
                     AVVLLGERFIVKAQARGMGEGAARKVLEDMDLGGLSKEGS"
BASE COUNT          318 a          948 c          954 g          419 t
ORIGIN      
        1 gtctgaggtg taccgggcgg atccgtgccc gagcgagtgg tagcgatcct ccacgggatc
       61 tccggcgctg ccatcgtgcc ccatgcagcc cacgatggcg gacgcccggc gcctgctaca
      121 tcggcacttt ggttactccg acttcaggcc cgcccaggcg ccggtggtgc agtcggtcct
      181 ggccgggtgc gacacgctgg cggttctgcc gaccggggcc ggcaagtcgg tctgcttcca
      241 ggtccccgcc atggcgctcg gcaggctgac ggtcgtggtg agcccgctca tctcgctgat
      301 gcaggaccag gtggcggccg cggagggccg ggggattccg gccgcgtgcc tcaccagcgg
      361 gctcacgtcg ggcgagcagg cggcggttcg ggctcgggtg gtcgaggggc gcctgcggct
      421 gctctatctc tcacccgaac ggctggagcg gttcgccccg gagcttcggg cggcgggcat
      481 ccgccccgcg ctcgtcgccg tggacgaagc ccactgcatc gcggagtggg gccacgattt
      541 ccgtcccagc taccggggcc tgctcgcggc gcgctaccgg ctgggccggc cacccgccgt
      601 ggcactcacc ggcagcgcga ctccagccgt tcggagggaa atcgcccggg cgctcggctt
      661 tccggcgggg cgctatgccg agcatctcgg ctcgttcgat cgccggaacc tctggttcgg
      721 tgtggtgcgg gtggcggacg atcgcgagcg gctgcaggcg ctgcggcgcc tgatctcggg
      781 cgacgatcgg atggccatcg tctacgcccc cacccgaagc gtcaccgaga gcgtggcgcg
      841 cgccctggtg gtgtccggcc atcgcgctgc gccgtaccat gccgggctcg accgcgcgcg
      901 ccgggccgcc atcctcgatg ccttcctctc cgaccgcctc gacgtcgtcg tggccacctg
      961 tgctttcggc atgggcatcg acaagcccac ggtgcgcctg gtcgtgcact ggacgcttcc
     1021 tcccacccct gagtcctatt accaggaggc cggtcgcgcc ggccgcgacg gggaattcgc
     1081 ccgctgcgtc ctgctgtggc acccgtcgga cgcggacctc caccgccggc tgctggacgt
     1141 caccttcccg ccacggcggc tcctggagcg gatctggcgt gaccggtcga aggtgaaggg
     1201 cgtcgccggc aacgtcctcg agtccgccga gcgactggcc cgggagctcc gaccggatct
     1261 ggggccggtg aactgggagc cggtccggcg ccgccggcgc cacgccgagg aacgccttcg
     1321 tgcgatggaa gggtatgcgc gcgagcgtgg ctgccgccgc cgcgccctgg tgggttactt
     1381 cggggagcag ctcgcggcgt gcgccggctg cgaccgctgt cgggccgagc ccacgagtcg
     1441 cccgctcccg cgcgcggccg ccgagcgcct cacgcgactg cgccaggcag tcggggggaa
     1501 gtccgggccg tggggaggat gcgtgctgga gcccgacgtg ctcctgcggc tggcgcggaa
     1561 tccgccgccg gatgccgcga cgctggccga cgtgccgggc gtcggcccgg cgctggccca
     1621 ggcgtatggc gcgacgatcc tgggcgcact cggcgtcgag ccggcaggaa ccgggcgagc
     1681 gggcgcggag aagggtgcgg cggagacggc gctcgagctg tggcgcgcgg ccgtggcgcg
     1741 cgagatgggc gtgccggact atgtgatcct ggggaatcgt gccctggcgc agctggctct
     1801 gggcgacgcc ggtccggcca ggagcatcgg cccgcggttc cgagccaagt tcgaggggga
     1861 gctgcgtcgg cttctcgggc tttccgcttc cccctgactc cgggtcagga gccctccttc
     1921 gacagtccgc ccaggtccat atcctcgagc accttccgcg ccgccccttc gcccatcccg
     1981 cgggcctgcg ctttcacgat gaaccgctca cccagcagca cgaccgcctc gctggtgcca
     2041 cttcggttcc actcctcgaa ccccggatat ccctcgatct tggtgcttcg ctgatagccg
     2101 tcggtgctct ccttggccac gttcatcccg aggatcgcgt ggaagggcac gtacaggaac
     2161 gggatgtggg cgtagtcgaa gatgcccacg tccacccgcc gtgagccgtc cgcgctggcg
     2221 aagtccacct ccgcttgcga gtattgccag cttcccaccg tcgtggtctc gcccttcggc
     2281 tccgctcgct tcagtccagc gacccggtcc gggagaaact cgatcagctc ccggaacgcc
     2341 accggcggga ccggctttcg cttggtgaaa ccctcggccg ccttctgcat ctgctgggcg
     2401 gcggcggtca gctgggcgag gggattgtcg gcgtggggcg cggcgtcgcc gccgcaggcc
     2461 gcggcggcca gcacgagggc gggaggactg agcagccggc ggaacatgac gacctccggg
     2521 atccgcgtgt ctgtggcgat gaggtgggtt ggcccgaaca tcggcccttg aggccacccc
     2581 gcgcaagctc gaccggctat attgtccacc gactgccggc atctcctcct accggaccc
//
LOCUS       DASUYN010000173         2326 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_276195, whole genome shotgun sequence.
ACCESSION   DASUYN010000173 DASUYN010000000
VERSION     DASUYN010000173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2326)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2326)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2326
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_276195"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..748)
                     /locus_tag="VF061_03375"
     CDS             complement(<1..748)
                     /locus_tag="VF061_03375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668572.1"
                     /translation="MRSPKGGKTRRTTVGATLALLGLTGGLVASSSALAAPDPLAPSS
                     SVVLQLKSSGGLKLKPKTLSVPVNKGELDPITGAGSIETKKAFTARRGGRKVKVKITG
                     LIFGANGGPGRIDAKVNKRRTKGFGKLSGGTLTRNGFGAKLDGVIAKLGKKGAKELRR
                     ALTPGGAKKASAAAGGIKGGKPLGTVAVNAVPKTVEVLPGGTLVFDADTEFGITLAAH
                     CVNSTIGHPVEAIPPGVQSGALNDIFTFPVT"
     gene            complement(909..1715)
                     /locus_tag="VF061_03380"
     CDS             complement(909..1715)
                     /locus_tag="VF061_03380"
                     /inference="COORDINATES: protein motif:HMM:NF044908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HEX6668573.1"
                     /translation="MPGAFYEPDGDRFVATELTRGPWDPNAQHAGPPAALIGRAIERL
                     GGGRIGGEDGVPAQIGRITYELLRSVPIAPLRVKAEVVRPGRRVELFAATLTDDAGET
                     LMRAQGWRLRIEEVSFDPPPGTSPRKPAGPERGEPGEFFHTGYDVGYHSAMEYRFVSG
                     AFMEVGPATVWMRMSVPLLPDEQPTPLQRVLVASDSGNGVSAALDWRRYLFINVDLGV
                     YLHRMPEGEWVCLDAVTLPERNGIGIADTLLHDERGAIGRAVQTLLIAER"
     gene            1804..2208
                     /gene="msrB"
                     /locus_tag="VF061_03385"
     CDS             1804..2208
                     /gene="msrB"
                     /locus_tag="VF061_03385"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HEX6668574.1"
                     /translation="MTYLEKVKKSEAKWRAELTPEQYEVVREKGTEAPFTSELNDNKA
                     AGTYRCVACGQPLFNSDAKFESGTGWPSFDAPMGDEAVATEDDNSFLMRRTEVLCSRC
                     DAHLGHVFDDGPAETTGKRYCINGCALEFAEE"
BASE COUNT          359 a          808 c          791 g          368 t
ORIGIN      
        1 cagtgaccgg gaaggtgaaa atgtcgttaa gggcgccgct ctggaccccc ggagggatcg
       61 cctcgacggg gtgaccaatg gtggagttga cgcagtgggc ggcgagcgtg atcccgaatt
      121 ccgtgtcggc gtcgaacacc agcgtcccgc cgggcagcac ctcgaccgtc ttcggcacgg
      181 cgttgaccgc gacagtcccc agcggcttgc cccccttgat ccctccggcg gcggcgctcg
      241 ccttcttcgc gcctccggga gtgagcgccc ggcgcagctc cttcgccccc ttcttgccga
      301 gcttcgcgat caccccgtcg agcttggcgc cgaagccgtt cctggtgagc gtgcctccgc
      361 tgagcttgcc gaagcccttc gtcctccgct tgttgacctt cgcgtcgatc ctgccgggcc
      421 cgccgttggc cccgaagatt agtccggtga tcttgacctt gaccttccgg cctccccgtc
      481 gcgccgtgaa ggccttcttg gtctcgatcg agccggcgcc ggtgatcggg tcgagctcgc
      541 ccttgttgac cggcacactg agggtcttcg gcttcagctt gaggccgccc gagcttttca
      601 gttgaagcac gaccgaggag ctgggggcga gcggatcggg cgcggcgagc gcggagctcg
      661 aggcgacgag cccgccggtc agcccgagca gggccagagt cgcgccgacg gtggtccggc
      721 gggtctttcc gcccttcggg cttcgcatcg cttcccctcc ttagtcgcgg tgatggccgg
      781 gcgctggtaa cgcgccgtgg ggataataaa cactcgcgtt tcccaatagt tgctacggga
      841 gccgtaaacc ggtcagagtc tggcttgacg cggcggcctc gagaactgtc gaccgagttc
      901 tctcccggtc agcgctctgc gatcaagagc gtctggacgg cacggccgat cgccccccgc
      961 tcgtcgtgaa ggagggtgtc cgcgatcccg atcccgttcc gctcgggaag cgtgaccgcg
     1021 tccaggcaga cccactcccc ttccggcatc cgatgcaggt agacgccgag atcgacgttg
     1081 atgaacaggt agcgccgcca gtcgagcgcc gcgctcaccc cgtttccgga gtccgaggca
     1141 acgaggacgc gctgcagcgg cgtcggctgc tcgtccggca ggagggggac gctcatccgc
     1201 atccagacgg ttgcgggacc gacctccatg aaggcgccgg agacgaaccg gtactccatc
     1261 gcggagtggt agccgacgtc gtagcccgtg tggaagaact cgcccggctc gccccgctcg
     1321 ggccccgcgg gcttccgcgg cgatgttccc ggcggcgggt cgaaggacac ctcctcgatc
     1381 cgaagccgcc agccctgcgc ccgcatcagg gtctcgccgg cgtcgtcggt gagcgtcgcc
     1441 gcgaacagct cgacccgcct ccccgggcga acgacctcgg ccttcacccg gagcggcgcg
     1501 atcggaacgg agcggaggag ctcgtaggtg atcctgccga tctgggccgg caccccgtcc
     1561 tcgccgccga ttctcccgcc ccccagccgc tcgatcgcgc ggccgatcag cgcggcgggc
     1621 ggcccggcgt gctgagcgtt cggatcccat ggcccccggg tgagctcggt ggcgacgaac
     1681 cgatcgccgt cgggctcgta gaaggcgccg ggcacgcggg catcctaggg tggcgtaacg
     1741 atcgagccct ccctcggacg gtaagagtga gcggattaag ctgctcgata ccgacggaac
     1801 gaggtgacgt acttggagaa ggtgaagaag agcgaggcga agtggcgagc cgagctcacc
     1861 cccgagcagt acgaggtcgt tcgcgagaag ggcaccgagg cgcccttcac cagcgagctc
     1921 aacgacaaca aggcggccgg cacctacagg tgcgtggcct gcggccagcc gctgttcaac
     1981 tccgacgcga agttcgaatc ggggaccggc tggcccagct tcgatgcgcc gatgggcgac
     2041 gaggcggtcg ccaccgagga tgacaacagc ttcctgatgc gccgcaccga ggtgctctgc
     2101 tcgcgctgcg acgcgcatct ggggcacgtc ttcgacgacg gcccggcgga gacgaccggc
     2161 aagcgctact gcatcaacgg ctgcgccctc gagttcgccg aggagtgaac cggaagctgg
     2221 tctgggcgtg cggctccttg gcgaacgcca acaccttggc cggctcgatc cggaacacgg
     2281 cggcggcatc ctcgcccgcg ccgaacacac catcaccgac gtcgaa
//
LOCUS       DASUYN010000174         4654 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1599495, whole genome shotgun sequence.
ACCESSION   DASUYN010000174 DASUYN010000000
VERSION     DASUYN010000174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4654)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4654)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4654
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1599495"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..496
                     /locus_tag="VF061_03390"
     CDS             <1..496
                     /locus_tag="VF061_03390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668575.1"
                     /translation="AEASDRQGLEEQVKAMVQVKKQEVSTLDAQRKLAEKSKQEAEVA
                     SFEAEKKDAERHKQFLEKRVSLHQAEKETAKARKSLAEATLKALELELQLANRRADRD
                     RAATADVAAALRHENVIRELERKVLEAQRTQADREKQVADRHQDIAKRRLELYQAQAA
                     AAGR"
     gene            complement(566..1297)
                     /locus_tag="VF061_03395"
     CDS             complement(566..1297)
                     /locus_tag="VF061_03395"
                     /inference="COORDINATES: protein motif:HMM:NF014017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HEX6668576.1"
                     /translation="MSGLWGGTSGYVYRHWRRGVFYPEGLRQRDELPWYAERFRTVEL
                     NNPFYRLPAPESFDRWRDAVADDFLFAVKASRYITHIRRLREVAEPIALFLERARRLG
                     SRLGPLLFQLPPSFPADLAALRRFLEELPDGYRWVVEFRHPSWHTPEAYEALAARGVA
                     LCIPVGGRVRPDLVTTADFVYLRMHAGDGAGGGFTPEQLQWWAGRLRALGGTGKDRFV
                     YFNNDAGGHAPRDARSLLDLLAVAR"
     gene            1452..2081
                     /locus_tag="VF061_03400"
     CDS             1452..2081
                     /locus_tag="VF061_03400"
                     /inference="COORDINATES: protein motif:HMM:NF025033.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX6668577.1"
                     /translation="MTSSLALFSRNFIKHPRMLGSLIPSSRFLVNRLLDQVDWSRAGT
                     IVEYGPGVGTFTGEILRRLGPGGSVVAIDTNRDFARYLARTLRDDRLHVIEGSAADAG
                     ENLQERGLGRADYVISGIPYSTMNPELRERILRTTHELLQPDGAFLVYQFTRAVLPYL
                     REVFPHVQQEFEPRNIMPARLFYCHRNSDRRNGNGRREARPKARTASEH"
     gene            complement(2085..2693)
                     /locus_tag="VF061_03405"
     CDS             complement(2085..2693)
                     /locus_tag="VF061_03405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668578.1"
                     /translation="MARDRNEAINSYISDMLGLEDHIEKAVRAQLEDLKDYPEVVAEL
                     RQIHRKIEHHISDLRGLSDRRQAGGVKETVKRAGSAVLGAAAGVIDLVRTEGLPKNLR
                     DDYTALSLAHIGYIMLHTTGLSLDDREVAELAQQGFTDYAESLTRLQAIIPAAVVAYF
                     KQEGLPARDDVAPQVRRTLEEVWQRQSLGTPASAESTIGRGL"
     gene            2836..3726
                     /locus_tag="VF061_03410"
     CDS             2836..3726
                     /locus_tag="VF061_03410"
                     /EC_number="3.1.21.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease IV"
                     /protein_id="HEX6668579.1"
                     /translation="MRRLIGAHTVDNGGIHMAALRAGRSGMQAPQIFTAIPKYYGDKT
                     SIRPERVQRFREALGRAGIDPANVLVHSAYVLNTATADEEKWSRAAAGLRKELERSTA
                     LGVGALCFHPGAATGGDREAALERVSLAITRALEAVPGTTRVLIENTAGAGLTVGKTP
                     GEVGAMLAGVPAALRRRTGYGLDTCHLFSAGHDLSASQGALVRILDEFEAAAGSPPAF
                     FHLNDSEGPLGSNRDRHMLIGEGLIGVEPFRWLLRDRRSAGVPLILETPQQHYEIGEE
                     DDSPDPYDVRMVELLRSLEE"
     gene            3856..4566
                     /locus_tag="VF061_03415"
     CDS             3856..4566
                     /locus_tag="VF061_03415"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HEX6668580.1"
                     /translation="MNSPERTAVSGIEAPRRPFLVALSLTLLVAAVQWTPPVPPLQVR
                     QANSLVMARVAATPFRVPGIVDSAALERHVVARFEHLPLARFFFSRTRERDFSDRLAR
                     AIVKEAGYLQVEPSLLAGVLLTENAPLDVRARSSQGALGLMQVMHFHAGEYDCDSADL
                     LQVESNICHGARVLGYYLKRTGNLRRALLRYNGCVSGTHTPNCRRYPSKVLRTASQVR
                     REVLKYPPYSLAVDTTTF"
BASE COUNT          748 a         1651 c         1586 g          669 t
ORIGIN      
        1 ggccgaggcc tccgaccggc agggcctcga agagcaggtg aaggccatgg tccaggtgaa
       61 gaagcaggag gtctccacgc tcgacgccca gcgtaagctc gccgagaaga gcaagcagga
      121 ggccgaggtc gcctccttcg aggccgagaa gaaggacgcc gagcgtcaca agcagttcct
      181 ggagaagcgg gtctcgcttc accaggcgga gaaggagacc gcgaaggccc ggaagagcct
      241 ggccgaggcc accctcaagg cgctggagct ggagctgcag ctcgccaacc gtcgcgccga
      301 tcgcgaccgg gccgcgaccg ccgatgtggc cgccgcgctc cggcacgaga acgtgatccg
      361 cgagctggag cgcaaggtgc tcgaggcgca gcggacgcag gccgatcggg agaagcaggt
      421 ggccgacagg caccaggaca tcgccaagcg ccggctggag ctgtaccagg cccaggcagc
      481 ggctgccggc aggtaaccgc gcgccgccgt ctgccgggcg cccaccgtcg gggaagctcc
      541 ccgcggtggg cgctcgtgtt tcggttcacc gcgcgacggc gaggaggtcc agcaggctgc
      601 gggcgtcccg gggggcatgg ccgcccgcat cgttgttgaa gtagacgaag cggtccttgc
      661 cggttccgcc cagcgcccga agccgcccgg cccaccactg gagctgttcg ggggtaaagc
      721 cgcctcccgc gccgtcgccc gcgtgcatgc ggaggtacac gaagtcggcg gtggtgacga
      781 ggtccggtcg cacccgacca cccacgggga tgcagagcgc cacgccgcgg gcggccagag
      841 cctcgtaagc ctcgggcgtg tgccagctcg gatggcggaa ctcgaccacc cagcggtagc
      901 cgtcgggcag ctcctccagg aagcggcgca gggcggcgag gtcggccggg aagctggggg
      961 gaagctggaa gagcaggggg cccagcctgg agccgaggcg gcgggcgcgc tcgaggaaga
     1021 gcgcgatcgg ctcggcaacc tcgcgcagcc ggcggatgtg ggtgatgtag cggctggcct
     1081 tgaccgcgaa gagaaaatcg tcggccacgg cgtcgcgcca gcggtcgaag ctctcggggg
     1141 ccggcaggcg atagaagggg ttgttgagct cgacggtgcg gaagcgctcg gcataccatg
     1201 gcagctcgtc ccgctggcgc aaaccctcgg ggtagaacac gccccgccgc cagtggcggt
     1261 acacgtagcc ggaggtcccg ccccacagcc cgctcacggg ccctcccctt gtcccgctgt
     1321 ccaaagcctt gaatcttcag gcttggccga aaccgaccct acagtcacgg agccaggaga
     1381 cacgacatga cgcacgattc cgcgggacct ctgatggcgg cgctgaaccc ggcgatcgcc
     1441 atggtgcggc cgtgacgtcg tcgctcgccc tcttcagccg caacttcatc aagcatccgc
     1501 gcatgctggg ctcgctcatc ccgagctcgc gctttctggt gaaccgactg ctcgaccagg
     1561 tggactggag ccgcgccggc accattgtcg agtacggccc gggcgtgggc acgttcacgg
     1621 gggagatcct gcgccggttg ggtcccggcg gcagcgtagt ggccatcgac accaaccgtg
     1681 atttcgcccg gtatctcgcc cgcacgcttc gcgacgaccg tctgcacgtg atcgaggggt
     1741 ccgcggccga tgccggtgag aacctccagg agcggggtct gggacgcgcg gactacgtca
     1801 tctcggggat tccctactcc accatgaacc ccgagctgcg ggagcggatt ctccgcacga
     1861 cgcacgaact gctccagccg gacggggcgt ttctggtcta tcagttcacc cgcgccgtcc
     1921 tgccctacct gcgcgaggtc tttccccacg tccagcagga gttcgagccg cgaaacatca
     1981 tgccggcccg gctgttctac tgccaccgca attccgaccg ccggaacggc aacgggcggc
     2041 gcgaggcccg tccaaaggcc cgcaccgcct cggagcacta gcggctacag accgcggccg
     2101 atggtggact cggcggacgc cggcgtgccc agggactgcc gctgccacac ttcctccagc
     2161 gtccggcgca cctgcggcgc cacgtcgtcg cgcgccggga gcccttcctg cttgaagtag
     2221 gcgaccacgg cggcgggaat gatcgcctgg agccgggtga gggactcggc gtagtcggtg
     2281 aagccctgct gcgcgagctc ggccacctca cgatcgtcga gcgacagacc cgtggtgtgc
     2341 agcatgatgt agccgatatg ggccaggctc agcgcggtgt agtcgtcgcg cagattcttg
     2401 ggaagcccct cggtccgcac caggtcgatg acacccgcgg ccgcgcccag caccgccgaa
     2461 cccgcccgct tgaccgtctc cttgacgcca cccgcctgcc gccgatcgct gaggccgcga
     2521 agatcggaga tgtggtgctc gatcttccgg tgaatctggc ggagctcggc gaccacttcc
     2581 gggtagtcct tcaggtcctc gagctgcgcc cgcacggcct tctcgatgtg gtcctccagc
     2641 ccgagcatgt cactgatata gctgttgatc gcttcgttcc tgtcgcgagc cacgatatac
     2701 ctccggatcc ttcggggaaa acgtaatgga aatcgccgga ccgcccggcg gggaagctca
     2761 gagaatggga cgcggagcgc acgatgtctg tgggggggat caccggtcat ccggggatcc
     2821 gggtatcatc ctggcatgag acgcttgatc ggcgcgcaca ccgtggacaa cggcggcatc
     2881 cacatggcgg ccctgcgcgc gggccgatcg gggatgcagg ccccccagat cttcaccgcg
     2941 atcccgaagt actacggcga caagacgtcc atccgcccgg agcgggtcca gcgcttccgc
     3001 gaggccctcg gccgggccgg gatcgacccc gccaacgtgc tggtgcactc ggcctacgtg
     3061 ctcaataccg cgaccgcgga cgaggagaag tggagccggg ccgccgccgg actcaggaag
     3121 gagctcgagc gatccaccgc gctgggggtg ggcgcgctct gcttccaccc gggcgcggcc
     3181 accggcggcg accgcgaggc cgccctcgag cgcgtgtcgc tcgccatcac ccgcgcgctg
     3241 gaggcggtgc ccgggacgac aagggtgctg atcgagaaca ccgccggcgc gggcctcacc
     3301 gtcggcaaga ccccgggcga ggtgggagcc atgctggccg gcgtgccggc cgcgctccgc
     3361 cgacgcacgg ggtacggcct cgacacctgc cacctcttct ccgcgggcca cgacctcagc
     3421 gcttcccagg gggcgctggt ccggatcctc gacgagttcg aggccgccgc cggatcgccg
     3481 cccgcattct tccacctcaa cgacagcgag ggccccctcg gctccaaccg ggaccggcac
     3541 atgctgatcg gggagggcct catcggcgtg gagccgttcc gctggctgct gcgggaccgg
     3601 cgcagcgcgg gcgtcccgct gatcctggag acgccgcagc agcactacga gatcggggag
     3661 gaggacgact cgccggaccc gtacgatgtg aggatggtgg agctgctgcg atcgctggag
     3721 gagtagcccc ctccaccgtc aaatccctcg ccagttcgat ttcttgccac tccccgtgtg
     3781 ccccgattct tgctgacgct tgccccggct cccgcaccag cacggtttac gtcgcaccgg
     3841 ggagagcgac ctcgcatgaa ttcgccagaa cgtaccgcag taagcgggat cgaggcgcct
     3901 cgtcgcccct tcctcgtcgc cctctccctg acgctgctcg tcgccgcggt ccagtggacg
     3961 ccaccggtgc ccccgctcca ggtacgccag gccaacagcc tggtcatggc gcgcgtggca
     4021 gcgacgccgt tccgagtccc cggcatcgtg gacagcgccg cgctggaacg gcacgtggtg
     4081 gcacgcttcg agcacctgcc gctggcgcgc ttcttcttca gccggaccag ggagcgcgat
     4141 ttctccgacc ggctcgcgcg ggcgatcgtg aaggaggccg gctatctcca ggtggagccc
     4201 agcctgctcg cgggcgtgct cctcaccgag aacgccccgc tcgacgtgcg ggcgcggagc
     4261 agccagggcg cgctcggcct catgcaggtg atgcacttcc acgccggcga gtacgactgc
     4321 gactccgccg atctgctgca ggtcgagtcc aacatctgcc acggcgcccg ggtgctgggc
     4381 tactacctca agcgcaccgg caacctccgt cgggcgctgc tgcgctacaa cggctgcgtc
     4441 tcgggcaccc atacgccgaa ctgccgccgg tatccctcca aggtgctgcg gaccgcgtcg
     4501 caggtgcgac gcgaggtgct caagtatccg ccgtacagcc tggcggtgga tacgaccacg
     4561 ttctgagatc ggcacactac gtccccccta cagccccaac aactccttca ccgccttccc
     4621 gaactcccgt cccacccgct ccagcacctc gacc
//
LOCUS       DASUYN010000175         5139 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_716966, whole genome shotgun sequence.
ACCESSION   DASUYN010000175 DASUYN010000000
VERSION     DASUYN010000175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5139)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5139)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5139
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_716966"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..726)
                     /locus_tag="VF061_03420"
     CDS             complement(<1..726)
                     /locus_tag="VF061_03420"
                     /inference="COORDINATES: protein motif:HMM:NF013292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoaspartyl peptidase/L-asparaginase"
                     /protein_id="HEX6668581.1"
                     /translation="MTISRRRFLGRSAATGLLGALPLPHSLGAPWIRRSAVEPVVIAS
                     MNGNWYRNGGKETCVELAWRLMTRGSDVLDALIAGVHILELDPEEDSVGYGGLPNADG
                     VVQLDSCCMHGPRRRAGGVAGLEGVRTPSKVAKLVMDHTDHHLLVGAGAQAFARNLGV
                     AIEDDLNTEHSRKAWLEWKRRTDPRHYLDPQRRAQSDRRVLDSLFHEGLLHSRVAHGT
                     INCDGINAKGEICGVTTTSGLAWK"
     gene            819..1010
                     /locus_tag="VF061_03425"
     CDS             819..1010
                     /locus_tag="VF061_03425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668582.1"
                     /translation="MKGRISKTLESILLDPAGRRQLREHLIRGRDGWVRVNGKTYRVQ
                     IDVTSKVKNPLGRRLAEAG"
     gene            1007..1837
                     /locus_tag="VF061_03430"
     CDS             1007..1837
                     /locus_tag="VF061_03430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668583.1"
                     /translation="MSFAFPALLAFLLVLPGIILRYSYARGPWGWASPTSLRRVSEEL
                     AYGVAFALVLHAVWLTLVRALGFEPDVDSMFLLLVGNFGEGDRYLDRVLASVSAHYPA
                     VAGYLVSLYGASAVAGNLGHRAVRRLKLDHRTKTFRFDNYWYYMLTGEVLDFRENAGE
                     ERRVDGVYLSAVVDHASGSYLYRGIVSDFTFDRDGGLDTIVLADAHRRRLVDDREEGT
                     PRAGVGPLEPDDRYYEIRGDFLVLRHTELRTLNLDYFAVTLEESPAGAGLEEPPPMPG
                     "
     gene            2007..2933
                     /locus_tag="VF061_03435"
     CDS             2007..2933
                     /locus_tag="VF061_03435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668584.1"
                     /translation="MRFVTRIIPTLAALATTATAAACSSDATAPSADDGSTTGSAVVT
                     VDSALTAGGVTRIEIELFPGELVAREVHVDNDDVEEKIVSGVTAIDPGQGTITLELGG
                     LTVAYGAGTRFRTESESHETRATWEALVQVELAAGRHPLIEARRNPAGAPQAPEDPSF
                     TAADLRLEAGSDEPKIEIYVDGDNLISADGTSEVGLRVLGLPITVNGRTRLGPDDNGG
                     AGQPSGGSVEFQMGVTSVDAGAGTLTLSNGTLVRVTAATAISPDGDLLTLDSAAAAVT
                     QGRPVRAEGRGTMESASPTVILASTLKIEVDD"
     gene            3000..3668
                     /locus_tag="VF061_03440"
     CDS             3000..3668
                     /locus_tag="VF061_03440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668585.1"
                     /translation="MRTCRAVPLTLAILACAARLGLAQQPATLPPEAVARAVLSADSA
                     GDWAAVLALAHPEALTRFRARQVFQLRMLAAHGWPSADVAETDSTAEAHWQQVRARQE
                     RFMLDSVFQVPDADSLARTSVDTVYARWVRGVRARADSGAVAPGYRVVGAVKASDTLA
                     YVVMERPLEQPLGPLPEMFRDLPRETHMAVVMVLRRHGRDWRSMLDGVGESLPFGSEM
                     LPDE"
     gene            3665..4804
                     /locus_tag="VF061_03445"
     CDS             3665..4804
                     /locus_tag="VF061_03445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P1 family peptidase"
                     /protein_id="HEX6668586.1"
                     /translation="MSPLLSLALLLLLASAPALAQERARPRARDLGIAPGLLPTGSLN
                     AITDVRGVAVGHATVREGDSIRTGVTAILPHRGNLFRERVPAAIHVGNGFGKLVGVTQ
                     VSELGELETPILLTCTLCVWRAADAMVAHLLAQPGMEEVRSINPVVGETNDGYALNVI
                     RRRPVGERDVRAALEGAAGGRVGEGSVGAGTGTVAFGWKGGIGTSSRRVAAAESTWTV
                     GVLVQSNYGGDLHILGVPVGRALGRDGLGVGGERQGARGSIMIVIATDAPVTDRNLRR
                     LAARAWLGVARTGSAMDNGSGDYAIAFSTHPGVRRRWREARRTAIELGNDAMSGLFQG
                     AVEATEEAIYNSLLTATTERANGNTVEALPADEVLRILRVRGAVK"
     gene            4912..>5139
                     /locus_tag="VF061_03450"
     CDS             4912..>5139
                     /locus_tag="VF061_03450"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX6668587.1"
                     /translation="MYDAIIVGARCAGAATAMLLARRGHKVLLVDRATFPSDLPHGHF
                     LHRRGPARLKRWGLLGRVAATGAPAITSITTD"
BASE COUNT          711 a         1817 c         1855 g          756 t
ORIGIN      
        1 cttccaggcg agtccgctcg tggtggtgac cccgcagatc tcgcccttgg cgttgattcc
       61 gtcgcagttg atggtgccgt gggccaccct cgagtgcagc agtccctcgt ggaagagcga
      121 atcgaggacc cgacgatccg attgcgcccg gcgttggggg tcgagatagt ggcgggggtc
      181 ggtgcggcgc ttccactcga gccaggcctt ccgggagtgc tcggtattga ggtcgtcctc
      241 gatcgcgacg ccgaggttgc gggcgaatgc ctgggcgccg gcgccgacga gcaggtggtg
      301 gtcggtgtgg tccatcacca gcttcgccac cttcgagggg gtacgcacac cctccagtcc
      361 ggccacgccg ccggcgcgcc gcctggggcc gtgcatgcag caggaatcga gctgcaccac
      421 gccgtcggcg ttgggcagtc cgccgtagcc cactgagtct tcctctggat cgagctcgag
      481 gatgtggact ccggcgatca gcgcgtcgag cacgtcgctc ccccgcgtca tgagccgcca
      541 ggcgagctcg acgcaggtct ccttgccgcc gttccggtac cagttgccgt tcatggaggc
      601 gatcaccacc ggctcgaccg ccgaccgccg gatccagggc gcgcccagcg agtgcggcag
      661 gggcagggcc cccagcaggc cggtggcggc gctccggccg agaaagcggc gacgggagat
      721 ggtcatggtg cggctcggga gtggggtcgg cggaagatga cgttgcgcgc cccgcatcgc
      781 caccctaacg ttcgacagcc ccgtcgcagg agcttcgctt gaagggccgc atcagcaaga
      841 cactggagtc catcctgctc gaccccgccg ggcggcggca gctgcgcgag catctcatcc
      901 ggggccggga cgggtgggtc cgagtgaacg gcaagaccta tcgggtgcag atcgacgtca
      961 cctcgaaggt gaagaatccc ctcggcagga gactcgcgga agccggatga gcttcgcctt
     1021 tccggccctc cttgccttcc tgctggtcct cccaggcatc atcctccgtt acagctacgc
     1081 gcgcggcccg tggggctggg ccagccccac gtcgcttcgc cgggtgtccg aagagctggc
     1141 ctacggggtg gccttcgccc tggtgctgca cgcggtctgg ctgaccctgg tgcgcgccct
     1201 gggcttcgag cccgacgtgg actcgatgtt cctgctcctg gtcggcaact tcggcgaggg
     1261 cgaccgatac ctggaccggg tgctggcctc ggtgtccgct cactaccccg cggtcgccgg
     1321 ttacctcgtg tcgctgtacg gcgcctccgc ggtggccggc aatctcggac accgcgccgt
     1381 gcgccggctc aagctcgacc accgcaccaa gaccttccgc ttcgacaact actggtacta
     1441 catgctgacc ggcgaggtgc tggacttccg ggagaacgcg ggtgaggagc gccgggtgga
     1501 cggcgtgtat ctctcggcgg tggtggatca cgcctccggc agctacctgt accgcggcat
     1561 cgtctccgac ttcaccttcg accgggacgg cggactcgac accatcgtgc tggcggacgc
     1621 ccaccgccgc cggctggtgg acgaccggga ggaagggacg cctcgcgccg gggtcggccc
     1681 cctggagccg gacgaccgct actacgagat ccggggcgac ttcctggtgc tccgccacac
     1741 ggagctgcgg accctcaacc tcgactactt cgcggtgacg ctggaggaga gccccgcggg
     1801 agccggcctc gaggagcctc cgccgatgcc cggctgatcc caccgcatcg tttcgttcca
     1861 gctgcattcc cgcgttacac gaccggtccc ctctccctgt tgtcattcaa tcacttacga
     1921 gtagcgagcg aaggctcgcg gcttgccctt ccggaggccg tcagccggtc gaacgaccga
     1981 gcgaccgacc tattccggag gcacccatgc gcttcgtcac gcgaatcatc ccgaccctgg
     2041 ccgccctcgc caccaccgcg accgcggctg cctgcagctc cgacgccacc gccccctcgg
     2101 ccgacgacgg gagcacgacg ggctccgccg tcgtcaccgt ggacagcgcc ctgaccgcgg
     2161 gcggggtgac tcgcatcgag atcgagctct tcccgggcga gctggtcgct cgcgaggtgc
     2221 acgtggacaa cgatgatgtg gaggagaaga tcgtgagcgg cgtgacagcg atcgacccgg
     2281 ggcaggggac catcacgctg gagctcggcg gactcacggt cgcctacggc gccgggaccc
     2341 gcttccgcac cgagagcgag agccacgaga cccgcgccac ctgggaggcg ctggtgcagg
     2401 tcgagctcgc ggccggacgc cacccgctga tcgaggcccg gcgcaatccg gccggtgccc
     2461 cgcaggcgcc ggaggacccg tccttcaccg ccgcggacct ccggctggaa gcgggaagcg
     2521 acgagccgaa gatcgagatc tacgtggacg gggacaacct gatcagcgcg gacggcacgt
     2581 cggaggtcgg cctccgggtg ctcggcctcc cgatcaccgt gaacggccgc acccggctcg
     2641 ggccggacga caacggcgga gccgggcagc cttcgggcgg gtcggtggag ttccagatgg
     2701 gcgtcacgtc ggtggacgcg ggggcaggca ccttgacgct gtcgaacggc acgctggtgc
     2761 gagtgacggc ggcgaccgcg atcagcccgg acggagatct cctcaccctg gattccgccg
     2821 ccgccgcggt gacacagggt cggccggtgc gggccgaggg acggggcacg atggaatccg
     2881 cctcgccgac cgtgatcctc gcgagcaccc tgaagatcga agtggacgac tgagggaccg
     2941 tgactcccgg gcccggccgg gctgagcctg gccgggacac ccgttagctt cactggatcg
     3001 tgcgcacatg ccgagccgtt ccgctcaccc tggcgatcct ggcctgcgcg gcccggctcg
     3061 gcctcgccca gcagccggcg acgctcccgc cggaggccgt cgcgagggcc gtgctcagcg
     3121 ctgactccgc aggggactgg gcggcggtgc tggcgctggc gcatcccgag gcgctgacgc
     3181 ggttccgcgc ccggcaggtg ttccagctcc gcatgctcgc cgcgcacggc tggccctccg
     3241 ctgacgtggc ggagacggac tccaccgcgg aggcccactg gcagcaggtg cgagcgcggc
     3301 aggagcggtt catgctggac tcggtcttcc aggtgcccga tgccgattcg ctcgcccgca
     3361 cgtcggtgga cacggtctac gcgcggtggg tgcgcggcgt gcgagcccgc gcggactcgg
     3421 gcgcggtcgc gccgggctat cgcgtcgtgg gcgcggtcaa ggcgagcgac accctcgcct
     3481 acgtcgtcat ggagcggccg ctggagcagc ccctcggtcc actgcccgag atgttccgag
     3541 acctgccgcg ggagacgcac atggcggtgg tgatggtgct ccggcggcac ggccgcgact
     3601 ggcgcagcat gctggacggg gtcggggagt cgctgccctt cggctccgag atgctgcccg
     3661 acgaatgagc ccgctgctct ctctcgcact cctcctgctg ctcgcctcgg cacccgcgct
     3721 cgcgcaggag cgtgcccgcc cccgggcgcg cgacctcggc atcgcgccgg gtctgctgcc
     3781 gaccggctcg ctcaacgcga tcaccgacgt ccgcggggtc gccgtggggc acgccaccgt
     3841 gcgggagggg gattcgatcc gcaccggcgt gaccgccatc ctgccgcacc gcggcaacct
     3901 gttccgggag cgcgtgcccg ccgcgatcca cgtgggcaac ggcttcggca agctggtcgg
     3961 cgtcacccag gtctcggagc tgggagagct ggagaccccc attctgctca cctgcaccct
     4021 ttgcgtgtgg cgcgcggctg acgccatggt ggcgcacctc ctggcgcagc ccggaatgga
     4081 ggaggtccgc tcgatcaacc ccgtcgtggg tgagaccaac gacggctacg cgctcaacgt
     4141 catccgccgc cggccggtcg gggagcgtga tgtccgggcg gcgctggaag gtgccgcggg
     4201 ggggcgggta ggggagggga gcgtcggcgc gggcacgggc acggtggcct tcggctggaa
     4261 gggcgggatc ggtacgtcgt cacggcgggt cgccgcggcc gagagcacct ggacggtcgg
     4321 cgtcctggtg cagagcaact acgggggcga cctccacatc ctcggtgtgc cggtcgggcg
     4381 ggcgctgggc cgcgacggcc tcggtgtcgg cggagagcgt cagggcgccc ggggctccat
     4441 catgatcgtg atcgccaccg atgcgccggt caccgaccgg aacctccgcc ggctcgccgc
     4501 ccgcgcgtgg ctgggcgtgg cgcggaccgg ctcggcgatg gacaacgggt cgggcgacta
     4561 tgccatcgcc ttctccacgc atccaggtgt tcgccgccgc tggcgcgagg cgcgccggac
     4621 cgcgatcgag ctgggcaacg atgccatgtc ggggctgttc cagggcgcgg tggaggccac
     4681 cgaggaggcg atctacaact ccctcctcac cgcgaccacc gagcgggcga acgggaacac
     4741 ggtcgaggcc ctgccggcgg acgaggtgct ccggatcctg cgtgtccgcg gggcggtgaa
     4801 gtgaggtagc cgcgggccac ctggtggccg gtcgagtgca ggttctccgc ttctcacgga
     4861 ggagccggga aatgagcggc tccggtcggg gatacctgcg gagaccgcct catgtacgac
     4921 gccatcatcg tcggcgcccg gtgcgccggc gccgctaccg cgatgttgct ggcccgccgg
     4981 gggcacaaag tcctgctggt ggaccgggcg acctttccga gcgacctccc ccacggccac
     5041 ttcctgcatc gccgcggccc cgcgcgactc aagcgctggg gcctgctggg ccgcgtggcc
     5101 gcgaccggcg cacccgcaat cacctccatc accaccgac
//
LOCUS       DASUYN010000176         5658 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_717315, whole genome shotgun sequence.
ACCESSION   DASUYN010000176 DASUYN010000000
VERSION     DASUYN010000176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5658)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5658)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5658
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_717315"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..562)
                     /locus_tag="VF061_03455"
     CDS             complement(<1..562)
                     /locus_tag="VF061_03455"
                     /inference="COORDINATES: protein motif:HMM:NF014427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEX6668588.1"
                     /translation="MATSKTPAAALLRPVLLALACVLPACDGGEDLQGTDPPAIAEVT
                     VDAPATTIAVGDSVQLEAVALDAAGNVVDDRAVEWTSADPAIAAVSSSGMVTGLHAGE
                     ATIGATVDDVAGAIAITVTATAPPAPPSPPGSGAPGLERIASGLAFPLDLTSPPDDDR
                     LFVVEKGGTIRIIADGAVLPEPFLDVS"
     gene            complement(626..2023)
                     /locus_tag="VF061_03460"
     CDS             complement(626..2023)
                     /locus_tag="VF061_03460"
                     /EC_number="1.11.1.5"
                     /inference="COORDINATES: protein motif:HMM:NF015131.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c peroxidase"
                     /protein_id="HEX6668589.1"
                     /translation="MTSRILAVALAAGATLWLSGCGDAATAPMDQTPRMAAAGETAAA
                     TPEVAALAAEVRQLAAAQGITPLARPPAVRPALSLLGQALAFDRELSGNRDIACMTCH
                     LSATATVDGRSVAVGQGASGLGTARVHPQGRFVHRNAPPLFNLHAMSTLTWDGRVFVD
                     KNGVVRTPGASLLAHQRATLECGTASALPMFPVLSRSEMRGETGNELAAVPDDKHQRT
                     WKFLMRRLGAFPEYRTMFEAAYPGAVFDSLNFAHAGNAMGCWIVNVFGATNTPWDQFL
                     AGNDDALTETQLRGAKAFMGTARCSQCHNGPLFTDSKFHNVAVPQVGPGFGNGPDGRD
                     DFGRMRQTGNTNHRYQFRTPPLRNVELTGPYGHDGAIVSLREWVNHYSQSDAKLRAYD
                     PSQLEPLLQGTLLATAADILLTRDTRLRTLVIPAGTVDEITEFLKALTDPAARDLRRF
                     VPARVPSGLPVDSGF"
     gene            2200..2598
                     /locus_tag="VF061_03465"
     CDS             2200..2598
                     /locus_tag="VF061_03465"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX6668590.1"
                     /translation="MRAPTATDLLLTVAEPTRLRILNCLAAAPLFVSDLQDVLDLPQP
                     TVSRHLQVLRRAELVRDTPIAQFVLYRLRRDAGAPGRLLSAILDALIQDDPALRSERE
                     RAAHRSRSHTHTRVQEPHALRAMPRARRST"
     gene            2595..3302
                     /locus_tag="VF061_03470"
     CDS             2595..3302
                     /locus_tag="VF061_03470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX6668591.1"
                     /translation="MTYRILVVDDEPDITALVAYHLAKAGFRVSTAANGPDALKAARE
                     EKPDIVILDLMLPGVSGYDILAELRKREETREVGVILLTARREETDRIRGLTLGADDY
                     LTKPFSPQELSLRVRALLRRLAAPPVTAGSTLAAGPISIDRSAHRATVGGEELSLTAT
                     EYKLLLTLVERRGRVQTRPQLLETVWEAQPDIQTRTVDMHVQRLRTKLGEAGRLIETV
                     RGFGYRFKGTERGARAR"
     gene            3299..5008
                     /locus_tag="VF061_03475"
     CDS             3299..5008
                     /locus_tag="VF061_03475"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX6668592.1"
                     /translation="MTFATRLVAGTLLVLVLAVGVLLLVAERSLRRDLVGDIERTLES
                     EAGLIREALSPDSTSWGENVRRLAASQGNRRITLVERGGRVIADSDFPPGPLPAIESH
                     GGRPEIRAALEGRTGIATRHSETVGRAMLYVAVPGGPGAIRVAADLRQVDEIVGRAQA
                     AVAGAALLALLVGGLLALVAGRSIARPLTQITTAARAIAAGSPPRFPRSGVPDIDALV
                     QALRQMHRQLADRFEELRREQAETAALVESMVEGVVAADERGRIVTANPAARRFLGYD
                     PLDPLPDLAELFRAKAAREVVDAALAGTPVLDREVELDGRSVLLNARPLPAGGAVLVM
                     HDLTELRRLEAVRRDFVANVSHELKTPLTSISGYAETLLSDPPDPEMARTFLGTILGN
                     ARRMQALVDDLLDLSRIESGRWQPSRTAIDVAAAARESWTEVCGRPESRQVAFAVEVE
                     PGAETLCADHDALRHVLTNLLENSVRHTAAGGRVVCLARREGAGIALAVRDNGAGITR
                     EHLPRIFERFYRADAARSREEGGTGLGLAIVKHLVEAHGGRVSAESERGKGTTVTCWF
                     PDA"
     gene            complement(5005..>5658)
                     /locus_tag="VF061_03480"
     CDS             complement(5005..>5658)
                     /locus_tag="VF061_03480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668593.1"
                     /translation="RLTQPRGVPAGRQDKEDARMRRAGLAVVLTAVVMGNGCGDREAR
                     AESGRTPVVDSAVPIEVALERFRRDHVRPAGLTGGAGTREALVRRFVSALESSDTAAL
                     REMVLQRNEFAWLYYPTTAFARVPYELPPALLWFQMQGQTEKGASLLLSERAGTPLGY
                     RGHQCASDRREGDNSIHGHCVIVRASATGDTVRDRLFGLIVERGGVYKFVSYANKLD"
BASE COUNT          766 a         2062 c         2028 g          802 t
ORIGIN      
        1 cggagacgtc gaggaagggc tcgggaagca cggcgccatc cgcgatgatc cggatggtgc
       61 cgcccttctc cactacgaac agccggtcgt cgtcgggtgg ggaggtgaga tccaggggga
      121 aggccagccc gctcgcgatc cgctccaggc cgggcgcacc cgagccgggc ggggacggag
      181 gtgccggcgg cgcggtggcc gtcacggtga tcgcgatggc gccggcaaca tcatcgacgg
      241 tggcgccgat cgtggcttcc cccgcgtgca gccccgtgac catccccgac gacgagacgg
      301 cagcgatggc cgggtccgcg ctggtccact cgacggctcg atcgtccacc acgttcccgg
      361 cggcgtcgag ggccacggct tcgagctgta cgctgtcgcc caccgcgatc gtcgtcgcgg
      421 gggcgtctac cgtcacctcg gcgatggccg gtggatcggt tccctggaga tcctcgccgc
      481 cgtcacaggc cggcaagacg cacgcgagcg ccagcaggac cgggcgcagg agcgccgcgg
      541 ccggggtctt cgaggtcgcc atgcctcatc gttacaacga tccggtgccc gctactgtga
      601 cgcagattcc ggtatgggcc gaccgctaga aaccgctgtc caccggcagc ccgctcggca
      661 cccgcgccgg cacgaagcgc ctcaggtcgc gcgcggccgg gtcggtgagc gccttcagga
      721 actcggtgat ctcgtccacg gtccccgccg ggatgaccag agtccggagc ctcgtgtccc
      781 gggtcaggag gatgtcggcc gccgtggcca ggagcgtgcc ctgcagcagc ggctcgagct
      841 ggctcgggtc gtaggcccga agcttggcgt cggactggct gtagtggttc acccactcgc
      901 gcaggctgac gatggccccg tcgtgaccgt agggaccggt cagctccacg ttgcgcagcg
      961 gcggggtccg gaactggtag cggtgattgg tattccccgt ctgccgcatg cgcccgaagt
     1021 cgtcccggcc gtcgggaccg ttgccgaagc ccggaccgac ctggggcacc gccacgttgt
     1081 ggaacttgct gtcggtgaac agcgggccgt tgtggcactg ggagcagcgc gccgtgccca
     1141 tgaaggcctt ggcgccgcgg agctgggtct cggtcagggc gtcgtcgttg ccggccagga
     1201 actggtccca cggcgtattg gtcgccccga acacgttcac gatccagcag cccatcgcgt
     1261 tgccggcatg ggcgaagttc aggctgtcga acaccgcccc cgggtaggcc gcctcgaaca
     1321 tggtgcggta ctcggggaag gcgcccagcc gccgcatgag gaacttccag gtccgctggt
     1381 gcttgtcgtc gggcacggcg gcgagctcgt tccccgtctc gccccgcatc tccgatcggg
     1441 agagcacggg gaacatcggc agcgcggagg cggtcccgca ctccagggtc gcgcgctggt
     1501 gcgccaggag gctcgcaccg ggcgtccgca ccaccccgtt cttgtcgacg aacacccggc
     1561 cgtcccaggt gagcgtgctc atcgcgtgca ggttgaagag cggtggggcg ttccggtgca
     1621 cgaagcgccc ctgcgggtgc acccgggccg tgccgaggcc gctggccccc tgccccaccg
     1681 cgacgctgcg cccgtccacc gtggcggtgg cggagagatg gcaggtcatg caggcgatgt
     1741 cccggttgcc gctcagctcc cggtcgaacg cgagcgcctg gcccaggagc gagagggccg
     1801 gtcgcaccgc aggcggccgc gccagcgggg tgatcccctg ggcggcggcg agctggcgga
     1861 cctcggccgc gagcgcggcg acctccggcg tggcggcggc ggtctcgcct gcggccgcca
     1921 tcctgggagt ctggtccatg ggagccgtgg cggcgtcgcc gcagccggaa agccacaggg
     1981 tcgcgcccgc agcgagggca acggcgagga ttctgctggt catcgtggcg actcggtgga
     2041 ggatagcgct gactgcacgg ctcgaggcgc ggccaccatg cccccccaca ggcacccaga
     2101 agcgactccc gtgccagggt tggcgcacca tgcaggcccc gcggagtgcc agatattgcg
     2161 cttgtacatt ctcccgggcg tatatatgtt caagcgcata tgcgcgcccc tacggcgacc
     2221 gacctcctcc tcaccgtcgc ggaacccacc cggctccgca tcctcaactg cctcgcggcc
     2281 gcgcccctct tcgtctccga cctgcaggac gtgctcgacc tgccccagcc gacggtctcc
     2341 cgccatctcc aggtcctccg gcgggccgag ctggtgcggg atacgccgat cgcgcagttc
     2401 gtgctctatc gcctgcgtcg cgacgccggc gccccgggcc gcctgctctc ggccatcctc
     2461 gacgcgctga tccaggacga ccccgcgctc cgctcggagc gggagcgggc cgcgcaccgg
     2521 agccggtcgc atacccacac gcgggtccag gagccgcacg ccctcagagc gatgccccgc
     2581 gccaggagat cgacatgacg tatcgcattc tcgtagtgga cgacgagccg gacatcaccg
     2641 ccctggtggc ctaccatctc gccaaggccg gcttccgggt ctccaccgcc gccaacggtc
     2701 ccgatgccct gaaggcggcg cgggaggaga agccggacat cgtcatcctc gacctgatgc
     2761 tgccgggcgt gtcgggctac gatatcctcg ccgagctcag gaagcgggag gagaccaggg
     2821 aagtgggcgt cattctgctc accgcgcgcc gggaggaaac ggaccgcatt cgagggctca
     2881 ccctcggggc cgacgactat ctcaccaagc ccttctcgcc ccaggagctc tcgctccggg
     2941 tgcgggcgct gctccggcgg ctggcggcgc ccccggtcac ggcgggatcc accctcgcgg
     3001 ccgggcccat ctccatcgac cgctccgccc accgggccac cgttggcggc gaggagttga
     3061 gcctcacggc caccgagtac aagctgctgc tcacgctggt cgagcggcgg ggccgggtgc
     3121 agacccggcc gcagctcctg gagacggtgt gggaggcgca gcccgacatc cagacccgca
     3181 ccgtggacat gcacgtccag cggctgcgca ccaagctggg cgaggccggc aggctgatcg
     3241 agacggtccg cggcttcggg taccggttca aggggacgga gcggggggcc cgcgcccggt
     3301 gaccttcgcc acccggctgg tcgcgggtac cctgctggtg ctggtgcttg cggtcggggt
     3361 cctgctgctg gtggcggaac gctcgctgcg gcgcgacctg gtcggggaca tcgagcggac
     3421 gctggagagc gaggcgggcc tcatccgcga ggcgctctcc cccgattcca ccagctgggg
     3481 cgagaacgtg cgccgcctcg ccgcgagcca gggcaatcgc cggatcaccc tggtggagcg
     3541 tggcggccgg gtgatcgccg acagcgattt ccccccgggg ccgctccccg cgatcgagag
     3601 tcacggcggc cggccggaga tccgcgccgc cctcgagggc cggaccggca tcgcgacccg
     3661 ccacagcgag acggtggggc gggccatgct ctacgtggcg gtgccgggcg gtcccggcgc
     3721 gatccgggtg gccgccgacc tgcggcaggt ggacgagatc gtggggaggg cacaggccgc
     3781 ggtcgcgggc gccgcgctgc tcgcgctgct cgtgggcggc ctcctcgctc tcgtggccgg
     3841 ccgatccatc gcccgtccgc tgacccagat cacgaccgcc gcccgcgcga tcgccgcggg
     3901 atcgccgccc cgctttccgc gctccggtgt gcccgacatc gacgcgctgg tgcaggcgct
     3961 gcgccagatg catcgccagc tggccgaccg cttcgaggag ctgcgccggg agcaggcgga
     4021 gaccgccgcg ctggtggagt ccatggtgga aggggtcgtc gcggccgacg agcgcggccg
     4081 catcgtcacc gccaatcccg ccgcccgccg gttcctgggc tacgacccgc tcgaccccct
     4141 gcccgacctc gccgagctct tccgcgccaa ggcggcgcgc gaggtggtgg acgcggcgct
     4201 cgcgggcacg ccggtcctgg atcgggaggt ggagctggac gggcgctccg tgctgctcaa
     4261 cgcgcggccc ctcccggcgg ggggcgcggt gctggtgatg cacgacctca ccgagcttcg
     4321 ccgcctggag gcggtgcgcc gcgacttcgt cgcgaacgtg tcccacgagc tcaagacccc
     4381 gctcacctcg atctccggct atgccgagac cctgctgtcc gacccgcccg atcccgagat
     4441 ggcgcgcacg ttcctgggca cgattctcgg caacgcgcgc cgcatgcagg ccctggtgga
     4501 cgatctcctc gacctctccc gcatcgagtc gggtcgctgg cagcccagcc gcaccgcgat
     4561 cgacgtcgcg gccgcggccc gcgagtcgtg gaccgaggtg tgcggccggc ccgagtcgag
     4621 acaggtggcg ttcgccgtcg aggtggagcc gggggccgag accctctgcg ccgatcacga
     4681 cgcgctgcgc cacgtgctga ccaacctgct ggagaactcg gtccgtcaca ccgccgcggg
     4741 ggggcgcgtc gtctgcctcg cgcgccgcga gggcgccggg atcgcgctgg cggtacggga
     4801 caacggcgcc ggcatcaccc gcgagcacct gccgcgcatc ttcgagcgat tctaccgtgc
     4861 cgacgcggcg cgctcccgcg aggaaggggg taccggtctc ggcctcgcga tcgtgaagca
     4921 cctggtggag gcgcacgggg gacgggtgtc cgcggagagc gagcggggca agggcacgac
     4981 ggtcacctgc tggttccccg acgcctagtc cagcttgttg gcgtaactca cgaacttgta
     5041 gacccctccc cgctccacga tgagcccgaa caaccggtcg cgcaccgtgt cgcccgtcgc
     5101 gctggcgcgc actatcacgc agtgtccatg gatggagttg tcaccttccc ggcggtccga
     5161 ggcgcactgg tgccctcggt atccgagcgg tgttccggcg cgctcggaga gcagcaacga
     5221 ggcacccttc tcggtctggc cctgcatctg gaaccagagc agcgcgggcg gcagctcgta
     5281 cggcacgcgg gcgaacgccg tggtgggata gtacagccag gcgaactcgt tccgttgcag
     5341 caccatctcc ctcagcgcgg cggtatcgga cgactcgagc gccgagacga accgacgcac
     5401 gagcgcctcg cgggtcccgg cgccaccggt caggccggcg ggccggacat ggtcccggcg
     5461 gaaccgctcc agggcgacct caatcggcac cgcgctgtcc acgacgggtg tcctgccgct
     5521 ctccgcgcgg gcttcacggt cgccgcatcc gttgcccatc acgacggcgg tgagcaccac
     5581 cgccagtccg gcccttcgca tcctcgcgtc ctccttgtcc tgccgcccgg caggcacgcc
     5641 tcggggctgc gtcagtcg
//
LOCUS       DASUYN010000177         2461 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1379181, whole genome shotgun sequence.
ACCESSION   DASUYN010000177 DASUYN010000000
VERSION     DASUYN010000177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2461)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2461)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2461
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1379181"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..602
                     /locus_tag="VF061_03485"
     CDS             <1..602
                     /locus_tag="VF061_03485"
                     /inference="COORDINATES: protein motif:HMM:NF044477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEX6668594.1"
                     /translation="PVVRDPLRLFREFAERCQSDRRHVEHVRKLSLLLFEQLGQTLGC
                     GPEEQLLLESASLLHDVGQLVSYPKHHKHSYSLITHAERLGLSPRDRELVALVSRYHR
                     RTGPRRKHPEFAVLPPADQDVVRRLSAILRVADGLDRGHSAAVDTVATRLDPDALRLT
                     VSPAESGTDLGLECWGASRKADVLGTLMERDILITARGR"
     gene            complement(607..1377)
                     /locus_tag="VF061_03490"
     CDS             complement(607..1377)
                     /locus_tag="VF061_03490"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HEX6668595.1"
                     /translation="MFPYRDDNPTLGTPAVTYLLIGLNVAAWVLVQGMGAEPFLSRSV
                     CELGLIPGEFLGRLPEGHSIPISESMACVMDQKREWYAPLTSMFLHGGWLHLIGNMWF
                     LWLFGNNVEDSMGSFRYLAFYLLTGLAAAGAQTFVNPDSAIPMVGASGAISGVMGAYV
                     VLYPRVRVHMIIFLGFFITRAAVPAFLMLGYWFLLQLLGGIPTLGDEKGGVAFWAHAG
                     GFLAGALLVFVFKDSELVAKHRAMSQTMEHGLVARERW"
     gene            complement(1441..1590)
                     /locus_tag="VF061_03495"
     CDS             complement(1441..1590)
                     /locus_tag="VF061_03495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lmo0937 family membrane protein"
                     /protein_id="HEX6668596.1"
                     /translation="MLWTIFVILLVLWLLGVVSSYTLGGFIHVLLIVAVILAVMQLVQ
                     GRRAL"
     gene            1871..>2461
                     /locus_tag="VF061_03500"
     CDS             1871..>2461
                     /locus_tag="VF061_03500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp70 family protein"
                     /protein_id="HEX6668597.1"
                     /translation="MASKIIGIDLGTTNSVVSVMEGGDPVVIPNAEGGRTTPSVVAFT
                     KDGERLVGQVAKRQAVTNPKNTVFSIKRFMGRRMNEVQEEIKKVPYKVVEGQNGLVAV
                     EISGKRYSPPEISAMILQKMKQTAEDYLGQTVDRAVITVPAYFNDAQRQATKDAGKIA
                     GLDVKRIINEPTAAALAYGLDKKGADRKIAVYDLGGG"
BASE COUNT          463 a          828 c          825 g          345 t
ORIGIN      
        1 agccggtcgt gcgcgacccg ctccggctct tccgcgagtt cgccgagcgc tgccagtcgg
       61 accggcggca cgtcgagcac gtgcgcaagc tctcgctgct gctgttcgag cagctgggtc
      121 agacgctggg ctgcggtccc gaggaacagc tgctgctgga atcggcgagc ctgctccacg
      181 acgtgggcca gctggtgagc taccccaagc accacaagca cagctacagc ctcatcaccc
      241 acgccgagcg tctgggactg tcgccgcggg atcgcgagct ggtcgccctg gtaagtcgct
      301 accaccgccg caccggaccg cggaggaagc acccggagtt cgcggtgctc ccgcccgccg
      361 atcaggacgt cgtccgccgg ctgagcgcga tcctgcgggt ggcggacggt ctcgaccgcg
      421 ggcactccgc ggcggtggac acggtggcga cgcgtctgga ccccgacgcg ctgagactca
      481 ccgtctcgcc ggcggagagc gggacggatc tcggcctgga gtgctggggg gcgtcgcgga
      541 aggcggacgt gctgggaacg ctgatggaac gggacatcct catcacggcc cgaggccgtt
      601 aggcgctcac cagcgttccc gggccaccag cccgtgctcc atggtctgcg acatcgcccg
      661 gtgcttcgcc accagctccg aatccttgaa gacgaagacc aggagcgccc cggcgaggaa
      721 ccctcccgcg tgggcccaga aggccacgcc gcccttctcg tcgcccagcg tggggatccc
      781 gccgaggagc tgcagcagga accagtagcc cagcatgagg aacgccggga ccgcggcgcg
      841 ggtgatgaag aagccgagga agatgatcat gtggacccgc actcgcgggt agagcacgac
      901 gtaggcaccc atcacgccgc tgatcgcgcc cgaggcgccg accatgggaa tcgcgctgtc
      961 cgggttgacg aaggtctgcg cgccggccgc cgccagcccg gtcagcaggt agaaggccag
     1021 atagcggaag ctccccatcg agtcctcgac gttgttcccg aagagccaca ggaaccacat
     1081 gttcccgatc aggtggagcc agccgccgtg gaggaacatc gaggtgagcg gcgcgtacca
     1141 ctcccgcttc tggtccatca cgcaggccat ggactcgctg atggggatgg agtgcccctc
     1201 cggcagccgg cccaggaact cccccgggat cagccccagc tcgcacaccg atcgggacag
     1261 gaagggctcg gcccccatgc cctggaccag cacccatgcg gccacgttga ggccgatgag
     1321 caggtaggtg acggcgggag ttccgagggt cgggttgtcg tcgcgatagg ggaacatgga
     1381 ggaaggtaac tactgcgggt ggcggggccg ccagacgcgg ccccgccgac ccactctccc
     1441 ctatagggcc cttctcccct gcaccagctg catcaccgcc aggatgaccg caacaatcag
     1501 caagacgtgg atgaacccac ccagcgtgta ggacgagacc actcccagca gccacaggac
     1561 caggaggatc acgaagatcg tccacagcat gattcgcctc ccttgaggtg cggtgtccgg
     1621 cgcttgtcgg gcacccgtgg aggtcagccg ggcccatccc ggtcccacgg ggctcactcc
     1681 gaggatatca gcattggtcg gcgagggtcg tgagacgggt cacgcccacg gaggggcggt
     1741 cgcccctcct cgatctgctg ccaatatggc agcaatacgg ggtatagctc ttgccctact
     1801 gcgggccgac gagctctccg tgtgtcagaa gggcaaccgg agccaacgca tcatcccaac
     1861 gggagtcgac atggcgtcga aaatcatcgg catcgacctg ggcaccacca attcggtcgt
     1921 ctccgtcatg gagggcggcg accccgtcgt gatccccaac gccgagggtg gccggaccac
     1981 accgtccgtg gtggcgttca ccaaggacgg tgagcgactg gtcggtcagg tggccaagcg
     2041 ccaggcggtg accaacccga agaacaccgt cttctcgatc aagcgcttca tgggccggcg
     2101 catgaacgag gtccaggaag agatcaagaa ggtcccctac aaggtcgtcg agggccagaa
     2161 cggcctcgtg gccgtcgaga tcagcggcaa gcggtacagc ccgcccgaga tctcggcgat
     2221 gatcctgcag aagatgaagc agacggcgga agactacctc ggccagacgg tggaccgcgc
     2281 cgttatcacg gtgcccgcgt acttcaacga tgcgcagcgc caggccacca aggatgccgg
     2341 caagatcgca ggccttgacg tcaagcgcat catcaacgag cccaccgcgg ccgcgcttgc
     2401 ctatggcctg gacaagaagg gcgctgatcg caagatcgcc gtgtacgacc tgggtggcgg
     2461 c
//
LOCUS       DASUYN010000178         2330 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_717391, whole genome shotgun sequence.
ACCESSION   DASUYN010000178 DASUYN010000000
VERSION     DASUYN010000178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2330
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_717391"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            153..>2330
                     /locus_tag="VF061_03505"
     CDS             153..>2330
                     /locus_tag="VF061_03505"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEX6668598.1"
                     /translation="MAQITINGKSMAFEPGATILEAARASGIEIPTLCWYPKLPIVGN
                     CRICLVSVQGQGKLLPACATPAAEGMVVETESDPAVENRRSVLGFLLERYPAEHLTNG
                     GRKRPRNEFERYVTQYDVPIRDHRELPLRAGDERPGDVMIQHDMSTCILCTRCVRACE
                     DIQEVGVLDVGMRGEHAQIIVGGDGDPDHAGCTWCGECVRVCPTGAIFEFIPRQRFGS
                     EVLRTPDNVARSVCPYCGVGCQIDLQVKGNEIMRVTSPDIEEDTPNQGSTCVKGRFGY
                     DFPMHRDRLVTPLIRKGWMHDGEQWVWTGEWPRHREGPWQLIEEMGRRRKPRPPQRSV
                     GKPPLTGVPSTEGDDVRDRVATPPAWYSAFREATWDEALSLTAQELWRIRDSHGSGAL
                     AALSSAKCSNEDNYVFMRMVRAGFGTNNVDHCTRLCHSTSVAAMSRALSTSAASGSMR
                     EIEEACDVIFISGANTTETHPVFGALIKRAVAKGARLIVADVRRIELAELADIHLQML
                     PGTDVALYNGMLNHVIAAGLVDRAFIESRTHDFDKVQAAVAAYTPEKVAKITGIPAAT
                     LRGAAEMYARGPRTSTLWAMGLTQHNTGTDIVASLLNLMLGCGMIGKWGAAMLPIRGQ
                     NNVQGASDMGAIPFAYTDYRPVTDPANRAEYARAWRVPEESLSLDRGLMVTEIVQDGS
                     PIRGLYVMGENPVLSDPNISHAEHWVRGLEFLAVQDLFLTETAR"
BASE COUNT          374 a          836 c          783 g          337 t
ORIGIN      
        1 acgccgcctg acccagctcc cctctgcact ccacgccccc gggcagcttt tccgggggcg
       61 ttttcgtttc ccggctccag cgcccttgct cgacccatcg agggggtcta gactcacgta
      121 aatcactcac ttccgccgac catcggtgtg caatggccca gattacgatc aacggcaaga
      181 gcatggcatt cgagcccggg gccaccatcc tcgaggcggc ccgcgcatcc gggatcgaga
      241 tccccaccct ctgctggtat cccaagcttc ccatcgtcgg caactgccgg atctgcctgg
      301 tctcggtcca gggccagggc aagctgctcc cggcctgcgc cacgccagcc gccgagggga
      361 tggtggtgga gaccgagtcc gacccggcgg tcgagaaccg aaggtccgtg ctcggcttcc
      421 tgctcgagcg ctacccggcc gaacacctga ccaacggcgg gcggaagcgg ccccgcaacg
      481 agttcgagcg ctacgtcacc cagtacgacg tccccatccg cgaccaccgc gagctccccc
      541 tccgggccgg cgacgagcgt ccgggcgacg tgatgatcca gcacgacatg agcacctgca
      601 tcctctgcac ccgctgcgtg cgggcatgcg aggacatcca ggaggtcggg gtgctcgacg
      661 tcggcatgcg gggcgagcac gcccagatca tcgtgggggg cgacggcgat cccgaccacg
      721 cgggctgcac ctggtgcggc gagtgcgtcc gggtgtgccc caccggcgcc atcttcgagt
      781 tcatcccccg ccagcgcttc ggctccgagg tcctgcgcac gcccgacaac gtggcccgct
      841 ctgtctgccc gtactgcggt gtcgggtgcc agatcgacct ccaggtgaag ggcaacgaga
      901 tcatgcgggt gacctcgccg gacatcgaag aggacacccc gaaccagggc tccacctgcg
      961 tgaaggggcg gttcggctac gacttcccca tgcaccggga ccggctggtg acgccgctca
     1021 tccgcaaggg ctggatgcac gatggggagc agtgggtgtg gaccggggag tggccccgtc
     1081 accgcgaggg cccctggcaa ctcatcgagg aaatgggccg gcggcggaag ccgcggccgc
     1141 cccagcggag cgtcggcaag ccgccgctga ccggggtgcc ctccaccgag ggcgacgacg
     1201 tgcgcgaccg ggtcgcgact ccgcccgcct ggtacagcgc cttccgggag gccacctggg
     1261 acgaggcgtt gagcctgacg gcgcaggagc tctggcgcat ccgtgacagc cacggctccg
     1321 gcgccctcgc cgcgctctcg tccgccaagt gcagcaacga ggacaactac gtcttcatgc
     1381 ggatggtccg cgcggggttc gggaccaaca acgtggacca ctgcactcgg ctctgccact
     1441 cgacctcggt cgcggcgatg agccgggcgc tgtcgacctc ggcggcctcg ggctcgatgc
     1501 gggagatcga ggaggcgtgc gacgtcatct tcatctccgg ggccaacacc accgagaccc
     1561 acccggtgtt cggcgcgctg atcaagcgcg cggtggccaa gggcgcgcgg ctcatcgtag
     1621 cggacgtccg ccgcatcgag ctcgccgagc tggcggacat ccacctgcag atgctccccg
     1681 gcaccgacgt ggcactctac aacgggatgc tgaaccacgt catcgccgcg gggttggtgg
     1741 accgggcgtt catcgagtcg cggacccacg acttcgacaa ggtgcaggcg gcggtggccg
     1801 cctatacgcc ggagaaggtg gcgaagatca ccgggatacc cgccgcgacc ctccgcggcg
     1861 cggcggagat gtacgcccgc ggtcctcgca cctccacgct ctgggcgatg ggactgacgc
     1921 agcacaatac cggcaccgac atcgtggcga gcctgctcaa cctgatgctc gggtgcggca
     1981 tgatcggcaa gtggggcgcg gccatgctcc ccatccgggg ccagaacaac gtgcagggcg
     2041 ccagcgacat gggcgcgatc ccctttgcct acaccgatta ccgcccggtc accgaccccg
     2101 ccaaccgggc cgagtacgcc agggcctggc gggtgccgga ggagtcgctc tcgctggacc
     2161 gcgggctcat ggtgaccgag atcgtgcagg acgggagtcc gatccgcggg ctgtacgtga
     2221 tgggcgagaa cccggtgctc tccgacccca acatctccca cgccgagcac tgggtccggg
     2281 ggctcgagtt cctcgcggtg caggatctct ttctcaccga gaccgcccgc
//
LOCUS       DASUYN010000179         3651 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_940450, whole genome shotgun sequence.
ACCESSION   DASUYN010000179 DASUYN010000000
VERSION     DASUYN010000179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3651)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3651)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3651
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_940450"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..609)
                     /locus_tag="VF061_03510"
     CDS             complement(<1..609)
                     /locus_tag="VF061_03510"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX6668599.1"
                     /translation="MADPIRYVASTTIPLYTAKIGGKKRMELLWGDRVRLLTQTGSRV
                     RVMARGLEGYVDRASLMEDSLLELYFIDVGQGDGVLVRTPDDRHVLIDGGFTRTKQPT
                     RKSAADFVDWKFVRDYERDTIRLDAMISSHCDADHYGGLWDLLNDDGDARSELNARKV
                     EVKAFYHAGVGWWTNDTTTRYLGPVDDEDNLTQLLGDRDSLRR"
     gene            complement(803..>3651)
                     /locus_tag="VF061_03515"
     CDS             complement(803..>3651)
                     /locus_tag="VF061_03515"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX6668600.1"
                     /translation="RPELAASLGADRFLREIRFAARLQHPHILPLLDSGEAAAEGGPG
                     PPVLWYAMPLVEGESLRERLRRHGQQPLADVLRWTAELAEALAYAHAQGVVHRDIKPE
                     NVLLSAAGAEPGVPPHALLADFGVARALETSASDRLTETGLALGTPTYMSPEQSLGDA
                     TLDGRTDLYSLGCVLYELLTGEPPYTGPTAQAIVAKRLGDPIPSARRLRESVPPALDL
                     VLQRLLAKSPADRYASAAELSTVLAALRESAPASPMPTVPSAATGRTRPVMVGGVLLV
                     ALVGALVAVRLAGRSAGEVAALDPAAVAVLPFRVTAPDRSLDYLGEGIVDLLAVKLDG
                     SAGVRAVPPRQLLAALRYQPGAAITPEQANAEARRTGAGRVLDGSMVRSGGGVVLSAI
                     LRRTDGAGRAVQAEASGSLDSLPALVDRLAARLLAGQAGSTPSLGELSSARAITAYLR
                     GKAANRRGRYQDAVAAFGEALEEDSTFALAALDLIASGQRFGNDELDRPSRLAWTYRS
                     RLTPKGRILLRAILGPRYPEPSSQIAQIAAWQEAVEAAPEQPESWFQLGDRQLHQGAL
                     NDLPNPVERAVGNFRRALELDPTWVSPLDHILMAKLYLEDTTDFRPLAQQWLAQDTMP
                     GDRSSYLRWRLGIALGDSALVARQRASLDRSNDEAVLWLAGNAQADAVGLGDVALAIR
                     ELERRAVTGPRLRLARRYRREWLLNTGRPAEALALTDSLASGEPFPGWVRITRIEDAL
                     FWDGDTAAAWAEVRVLGGTESSPELRRLSPGVRALASCRLGFWAMDRGDREGVRRWAG
                     RLRADTPAGPEFNADNRLMCAELLDAWVAWREGRPEARRLLDRADSIYITSDVMDDWQ
                     VTNLVTARLREAVGDLPGAARAIARVRVAMPASPRYQSTYLREQARIGLEVGDTLTAV
                     RALRRYVALREGAAPALRARADSARARLATLVGR"
BASE COUNT          503 a         1307 c         1369 g          472 t
ORIGIN      
        1 ccggcggagg ctgtcgcggt cgccgaggag ctgggtcagg ttgtcctcgt cgtccaccgg
       61 acccaggtag cgcgtggtgg tgtcgttggt ccaccagccg acaccggcgt ggtagaaggc
      121 cttgacctct accttccggg cattgagctc gcttcgggcg tcgccgtcgt cgttgagcag
      181 gtcccacagg ccgccgtagt ggtccgcgtc gcagtgcgag ctgatcatcg cgtccaggcg
      241 gatggtgtcg cgctcgtagt cccgcacgaa cttccagtcc acgaagtcgg cggcgctctt
      301 gcgggtgggc tgcttggtgc gggtgaagcc gccgtcgatc agcacgtgcc ggtcgtccgg
      361 cgtccgcacc agcacgccat cgccctggcc gacgtcgatg aagtagagct cgagcaggga
      421 gtcctccatc agcgaggccc ggtccacgta cccctcgaga ccccgcgcca tgacccgcac
      481 ccggctgccg gtctgggtca gcagccgcac ccggtcgccc cagaggagct ccatccgctt
      541 cttcccgccg atcttcgcgg tgtagagggg aatcgtggtg gacgcgacgt acctgatcgg
      601 gtcggccatg tgcgctccgg gaaggtgagg atgcgcacta gcctacgggt ggggaccggg
      661 gccggccaga gggaaacacg gcaggaaacg ggcgcgaacg cgacacgttt gcggtgctgg
      721 gtgacgcatt catgatcgcg gtgcgtgtgt ggccggcgaa gtgcgacaga ctggcgggcg
      781 ggaagcgggc gtgaccgccc tctcaccgcc cgaccagcgt cgccagccgg gcgcgcgcgc
      841 tgtcggctct ggcccgcagc gccggcgccg ctccctcgcg gagggccaca taccgccgca
      901 gcgcacgcac ggccgtgagg gtgtcgccca cctcgagccc gatccgcgcc tgctcccgca
      961 ggtaggtgga ctggtacctc gggctggcgg gcatcgccac ccgcacccgg gcgatcgccc
     1021 gcgccgctcc cggcaggtcg ccgacggcct cgcgcagccg ggccgtcacc aggttggtca
     1081 cctgccagtc gtccatcacg tcactcgtga tgtagatcga atccgcccga tccagcagcc
     1141 gtcgggcctc gggccgccct tcgcgccagg ccacccaggc gtcgagcagc tcggcgcaca
     1201 tgagccggtt gtcggcgttg aactccgggc cggccggcgt gtcggcgcgc agtcggcccg
     1261 cccaccggcg cacgccctcc cggtcgccac gatccatggc ccagaagccg agccggcagg
     1321 aggcaagcgc tcgaacaccg ggggagagcc gccggagctc gggtgatgac tccgtcccac
     1381 cgagcacccg gacctcggcc caggccgcgg cggtgtcacc gtcccagaag agcgcgtcct
     1441 cgatgcgggt gatccggacc cagcccggaa acggctctcc cgaagccagg ctgtcggtga
     1501 gcgcgagtgc ctcggccggc cgcccggtgt tgagcagcca ttcccgccgg tagcgccggg
     1561 ccaggcgcag ccgcggaccg gtgacggcgc ggcgctccag ctcgcgaatc gccagtgcca
     1621 catcgccgag gccgacggca tccgcctgcg cattgcctgc cagccagagg accgcctcgt
     1681 cgttcgaccg gtcgagcgac gcgcgctggc gggcgaccag ggccgagtcg cccaaggcga
     1741 tgcccaggcg ccagcgcagg taggatgacc gatcgccggg catggtatcc tgcgccagcc
     1801 actgctgcgc caacggccgg aaatcggtcg tgtcctcgag gtagagcttg gccatgagga
     1861 tgtggtcgag cggggagacc caggtcgggt cgagctccag cgcccggcgg aagttcccca
     1921 cggcgcgctc caccggattg ggcaggtcgt tgagggcacc ctggtgcagc tgccggtcgc
     1981 cgagctggaa ccaggactcg ggctgctccg gcgccgcctc gaccgcttcc tgccaggcgg
     2041 cgatctgcgc gatctgggac gaaggctccg ggtaccgggg gccgagaatc gcacgcagca
     2101 ggatccggcc cttgggcgtg agcctggagc ggtaggtcca ggcgagccgg ctggggcggt
     2161 ccagctcgtc attgccgaag cgctggcccg aggcgatcag gtcgagggcc gcgagtgcga
     2221 aggtgctgtc ctcctcgagc gcctccccga aggcggccac cgcgtcctgg tagcggccgc
     2281 gccggttggc cgccttgcct cgcaggtagg cggtgatcgc ccgggccgac gagagctcac
     2341 cgagcgaggg cgtgctgccg gcctgccccg cgagcagcct ggcggcgagc cggtccacca
     2401 gcgccggcag cgagtccagg cttccggaag cctccgcctg cacggcgcgg ccggcgccgt
     2461 ccgtgcggcg gaggatcgcg ctcagcacaa cccccccgcc ggagcggacc atgctcccgt
     2521 ccagcacccg ccctgcaccg gtgcgccggg cctcggcatt cgcctgctcc ggtgtgatgg
     2581 ccgcgcccgg ctgatagcgc agcgcggcga gcagctgccg cggcgggacc gcgcgcacac
     2641 ccgcagagcc gtcgagcttg accgcgagca gatccacgat tccctcgccc agatagtcga
     2701 gcgaccggtc gggtgcggtc acgcggaagg gaaggacggc gacagccgcg gggtccagcg
     2761 cggcgacttc gcccgccgag cgacccgcga gcctcacggc cacgagcgct ccgaccaggg
     2821 cgacgagcag cacgcctccg accatcaccg ggcgggtccg gccggtcgcg gccgacggga
     2881 ccgtcggcat cggcgacgcg ggggccgact cccgcagcgc ggcgagcacc gtggacagct
     2941 cggccgcgct ggcatagcgg tcggccggcg acttggccag gagccgctgg agcacgagat
     3001 cgagcgccgg cgggaccgac tcgcgcagcc ggcgggcgga ggggatcgga tcgcccaggc
     3061 gcttggccac gatcgcctgt gcggtggggc cggtgtacgg cggctcaccg gtcagcagct
     3121 cgtagagcac gcagcccagg ctgtagaggt cggtgcggcc gtcgagcgta gcgtcgccga
     3181 gcgattgctc cgggctcatg taggtcggag tgccgagcgc gagcccggtc tcggtgaggc
     3241 ggtcggaggc gctggtctcg agggcgcggg ccactccgaa gtcggcgagg agcgcgtgcg
     3301 gcggcacacc cggctcggcg ccggcggcgc tgagcagcac gttctccggc ttgatgtcgc
     3361 ggtgcacgac gccctgcgcg tgggcgtacg ccagcgcttc cgccagctcg gcggtccagc
     3421 ggaggacgtc ggcgagcggc tgctggccgt gccggcggag gcgctcgcgg aggctctcgc
     3481 cctccaccag cggcatggcg taccagagca ccggcgggcc ggggcccccc tcggcggccg
     3541 cctcgccgga atcgaggagc ggaaggatgt gcgggtgctg cagccgcgcg gcgaagcgga
     3601 tctcacggag gaaccggtcg gcaccgaggc tggcggccag ctcgggccgg a
//
LOCUS       DASUYN010000180         3506 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_278691, whole genome shotgun sequence.
ACCESSION   DASUYN010000180 DASUYN010000000
VERSION     DASUYN010000180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3506)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3506)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3506
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_278691"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2533
                     /gene="mfd"
                     /locus_tag="VF061_03520"
     CDS             <1..2533
                     /gene="mfd"
                     /locus_tag="VF061_03520"
                     /inference="COORDINATES: protein motif:HMM:TIGR00580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003690 - double-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HEX6668601.1"
                     /translation="LLELLPGDTYLIQESAGADADEVARAWSEAEHHLEVARRLGEDV
                     PRRDAILEQPDAWRGRIGAFPRLTLRDDSADLQFGFFPPERVDRDLNRLRALLAGSPP
                     TLILCDNEGQLERLDELLEEGARGATRATLAIGALDGGFVMPSLRVLTDHEIFRRARR
                     LRRPRRYRQAAPSLATGALSVGDYVVHLDHGIGVYRGIQTIMVGESTLEVAIVEYEGG
                     DRLNVPLYRLDQLERYRAAGEDGDRPPPRIHRLGGASWQRVRERTRQAIKHMAAELLD
                     LYARRSVSAGYAFPPDTRWQRELESSFLYEDTPDQRKATEEVKTDMEKPLPMDRLLVG
                     DVGYGKTEIAVRAAFKAVQGGKQVAVLVPTTILAEQHGRTFTERLADFPVKIEVLSRF
                     RTPKEQKAALARLTGGGTDIVIGTHRLLSKDVAFKDLGLLVVDEEHRFGVKHKERLKA
                     LRLAVDVLTLTATPIPRTLHLSLAGLRDLTLIETAPRDRSPILTFVEPWDDGLLEEAF
                     AREIDRGGQVFVVHNRIETIETVAAKVRGLAPRARVGVAHGQMPAEDLETVMRGFVSG
                     EVDILVSTMIVESGLDVPNANTMVVHDAHRFGLAQLYQLRGRVGRSHRRAYCYLLVPD
                     AIDADAEERLRVLEHHTDLGAGYRIALKDLEIRGAGNLLGAEQSGHAHAVGFDLYMRW
                     LEETVRNLRGQGAAEQPAPPDVVLDRPAHLPDGYVPDDDVKLDLYRRLARALAPGEID
                     GLRDELRERFGPLPAEAETLLHMAHLRVLGAALGLQHVLVRGDEARLTFRPGTQPRLT
                     GLTSALDDVQLAAEVRRTVPLSLRLLRLGGEPIVPALVRALQKAV"
     gene            2567..>3506
                     /locus_tag="VF061_03525"
     CDS             2567..>3506
                     /locus_tag="VF061_03525"
                     /inference="COORDINATES: protein motif:HMM:NF024545.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEX6668602.1"
                     /translation="MRRSVLALLLASGVALSGCSNFRDLFSAHADVAAEAGALELPVQ
                     RLADMVTGVTKGQRQRVTRETADFITDTWVDYALFSQAVALNQLPVDSASVVSAVWPE
                     LAELKGTHFHDTLMSRRAAMSDSAADSLYRADVRVLQHILFGARNAAPPQKEATRKKA
                     EATLARVRKGADFGQLASQLSEDPGSKADSGFLPPGPKGRFVASFDSAAWVLQPGQTS
                     GVVETPFGFHLIRRPPLGEVRGRLDDYLMDQAGAAVDSTFMDSLAAASEIELENGAAA
                     TMRAALGATQESRRSDRAITSYKGGELTVQEFLRWVR"
BASE COUNT          511 a         1244 c         1250 g          501 t
ORIGIN      
        1 cttgctcgag ctgctgccgg gcgacaccta cctgatccag gagtcggccg gggccgatgc
       61 cgacgaggtt gcccgtgcct ggagcgaggc ggagcaccac ctcgaggtcg cacgccggct
      121 gggcgaggac gtgccgcggc gcgacgcgat tctggagcag ccggacgcct ggcgcgggcg
      181 gatcggggcg ttcccccggc tgaccctgcg ggacgactcc gccgatctcc agttcgggtt
      241 cttcccgccc gagagggtgg accgggacct gaatcggctg cgcgcgctcc tcgccgggtc
      301 cccgccgacc ctcatcctgt gcgacaacga ggggcagctg gagcggctgg acgagctgct
      361 ggaggaaggc gcgcgcggcg cgactcgggc cacgctcgcc atcggcgcac tggacggcgg
      421 cttcgtgatg ccctcgctcc gcgtcctcac cgaccacgag atcttccgtc gcgcccgccg
      481 gctgcgccgc ccccggcggt accgtcaggc ggcgccctcc ctggcgaccg gcgcgctgag
      541 cgtcggcgat tacgtcgttc acctcgacca cgggatcggg gtctatcgcg gcatccagac
      601 gatcatggtg ggggagtcca cgctcgaggt cgcgatcgtg gagtacgagg ggggcgaccg
      661 gctcaacgtg cccctctacc ggctcgacca gctggagcgc taccgcgccg cgggcgagga
      721 cggcgaccgg ccgccgcctc gcatccaccg gctcggcggc gcctcctggc agcgggtgcg
      781 ggagcgcacc cgccaggcga tcaagcacat ggcggccgag ctcctggatc tctacgcccg
      841 ccgctccgtc tccgccggct acgcgttccc cccggatacc cggtggcagc gggagctgga
      901 gagcagcttc ctctacgagg acacgcccga tcaacggaag gcgacggaag aggtcaagac
      961 cgacatggag aagccgctcc ccatggaccg tctgctggtg ggcgacgtgg ggtacgggaa
     1021 gaccgagatc gcggtgcgcg ccgcgttcaa ggcggtgcag ggcggcaagc aggtcgcggt
     1081 cctggttccc accaccatcc tggcggagca gcacggccgc accttcaccg aacggctggc
     1141 cgacttcccg gtgaagatcg aggtgctctc ccgcttccgg accccgaagg agcagaaggc
     1201 ggcgctcgct cgcctcacgg gcggcggcac cgacatcgtc atcggcaccc accgcctgct
     1261 ctccaaggac gtcgccttca aggatctcgg cctcctggtg gtggacgagg agcaccgctt
     1321 cggcgtgaag cacaaggagc ggctcaaggc gctccggctt gcggtggatg tgctcacact
     1381 gacggcaacg ccgatccccc ggaccctgca cctctcgctc gcggggctga gggacctcac
     1441 gctcatcgag accgcgccgc gggaccggtc gcccatcctg accttcgtcg agccgtggga
     1501 cgacggcctg ctggaggagg cgttcgcccg ggaaatcgat cgcgggggcc aggtgttcgt
     1561 ggtccacaac cggatcgaga ccatcgagac agttgccgcc aaggtccggg ggctcgcgcc
     1621 gcgggcccgg gtgggcgtgg cgcacgggca gatgccggct gaggacctgg agacggtgat
     1681 gcgcgggttc gtgtccggtg aggtggacat cctcgtctcc acgatgatcg tggaatccgg
     1741 actcgacgtg cccaacgcga acaccatggt ggtgcacgac gcccaccggt tcggcctggc
     1801 ccagctgtac cagctccgcg gcagggtggg gcggagccac cggcgcgcct actgctacct
     1861 gctggtgccc gatgccatcg atgccgacgc cgaggagcgg ctccgggtgc tggagcatca
     1921 caccgacctc ggcgccggat accggatcgc gctcaaggac ctcgagatcc gcggcgcggg
     1981 caacctcctg ggcgcggagc agtcgggaca cgcgcacgcg gtggggttcg acctctacat
     2041 gcgctggctg gaggagaccg tccgcaatct ccggggtcag ggcgccgcgg agcagcccgc
     2101 cccacccgat gtcgtgctgg atcgcccggc gcacctgccg gacggctacg tgccggacga
     2161 cgacgtcaag ctcgacctgt accggcgact ggcgcgggcg ctcgcacccg gcgaaattga
     2221 cgggctgcga gatgaactgc gcgagcgctt cgggcccctt ccggccgagg ccgaaaccct
     2281 cctgcacatg gcgcatctgc gcgtcctggg ggcggcactc ggcctgcagc acgtgctggt
     2341 ccggggggac gaggcgcggc tcaccttccg cccgggcact cagcccaggc tcaccgggct
     2401 cacatcggcg ctggacgacg tgcagctggc ggcagaggtg cgccgcaccg tgccgctctc
     2461 gctacgcctc ctccgtctcg gtggagagcc gatagtaccc gcgctggttc gggcgttgca
     2521 gaaagccgtt tgagttccag tgtttcagtc cccaaccgga gtacccatgc gtcgttccgt
     2581 tctcgctctc ctgctcgcct ccggagtcgc actcagcggc tgctccaatt ttcgcgacct
     2641 cttctcggct cacgcggacg tcgccgccga ggcgggcgcg ctcgagctgc cggtccagcg
     2701 actcgccgac atggtcaccg gcgtgaccaa gggtcagcgc cagcgggtga cccgggagac
     2761 ggcggacttc atcaccgaca cgtgggtgga ctacgccctg ttctcgcagg cggtggcgct
     2821 gaaccagctg ccggtcgact ccgccagtgt ggtcagcgcg gtgtggcccg agctggccga
     2881 gctcaagggg acgcatttcc acgacaccct gatgtcccgc cgcgcggcga tgtccgatag
     2941 cgccgcggac agcctgtacc gcgccgacgt ccgcgtgctg cagcacatcc tcttcggcgc
     3001 gcggaacgct gccccgccgc agaaggaggc gacccggaag aaggcggagg cgaccctcgc
     3061 ccgcgtcagg aagggtgcgg acttcggtca gctcgcgtcg cagctctcgg aggatccggg
     3121 gagcaaggcc gacagcggct tcctgccgcc cggccccaag ggtcgcttcg tggcgtcctt
     3181 cgacagcgcc gcctgggtgc tccagccggg gcagaccagc ggggtggtgg agacgccgtt
     3241 cggcttccac ctgatccggc ggccgccgct gggcgaggtc cgcgggcggc tcgacgacta
     3301 tctgatggac caggcgggcg ccgcggtgga ctcgaccttc atggacagcc tggccgccgc
     3361 aagcgagatc gagctggaga acggcgccgc cgcgaccatg cgcgcggcgc tgggcgccac
     3421 ccaggaatcc cgccgctcgg accgggcgat caccagctac aagggcgggg agctcaccgt
     3481 acaggagttc ctccgctggg tgcgcg
//
LOCUS       DASUYN010000181         4155 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1380667, whole genome shotgun sequence.
ACCESSION   DASUYN010000181 DASUYN010000000
VERSION     DASUYN010000181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4155)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4155)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4155
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1380667"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(277..654)
                     /locus_tag="VF061_03530"
     CDS             complement(277..654)
                     /locus_tag="VF061_03530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668603.1"
                     /translation="MDHAWDVLGEWQAEFELPESESPVHGKVTFRSWGDAELQLDPIE
                     AAIAGIPASVPLERASEVHLTDAGGGALQWVLHAPSTNWSLQATLWPGSLHLFVHDPE
                     DEEEHLYRARATRNREYYLRKYP"
     gene            815..1096
                     /locus_tag="VF061_03535"
     CDS             815..1096
                     /locus_tag="VF061_03535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668604.1"
                     /translation="MNEFFITLAAGFAGYLLARRFMSRRLRFVDAVQSRFAPLVAAVA
                     AAVAISPLTALPLVTLTTAMVFGIGAGIGTASGARLVRRADMELRRLIP"
     gene            1169..1411
                     /locus_tag="VF061_03540"
     CDS             1169..1411
                     /locus_tag="VF061_03540"
                     /inference="COORDINATES: protein motif:HMM:NF016265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HEX6668605.1"
                     /translation="MAPLQCRRCGQTREGMAFQPFPTELGRKVFEQICGVCWAEWTKT
                     QQQLINHYGLNLRDPQAKEFLLQNMEQFLFQTRSGV"
     gene            complement(1439..2452)
                     /locus_tag="VF061_03545"
     CDS             complement(1439..2452)
                     /locus_tag="VF061_03545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668606.1"
                     /translation="MQRSYGAALRFVNPDLSCGVPLLLLPLLLTLLLPVAAAAQGLPA
                     FRPINPVAASRSGLGFEPFREPSPGRWQVDVGLEYASTIEYNRVSGAAFFLDSELLRL
                     RARLHHDLGPRAFLLGEAELLGAYDGVLDGFLEWYHDLLGIEIPERERRPPNDFLYAA
                     DLPGRSPVLRRPGDLFLGDLRIGAGFRPHPRLQTVLALTLPTNSGPPGYGRDAVSASL
                     LNTLRLPVTPRLMVEAGLAGGYTPAGGPLEDLQHELFAAGSGGLRWRFWGRQSLFGNL
                     FVHSPYYRDTGIPALDGRELSFDFGWILAGEGGRELRVGMTEDLEPAGPAVDLVFRIG
                     LGL"
     gene            2620..>4155
                     /gene="aroF"
                     /locus_tag="VF061_03550"
     CDS             2620..>4155
                     /gene="aroF"
                     /locus_tag="VF061_03550"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: protein motif:HMM:NF008865.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HEX6668607.1"
                     /translation="MRVAIQGTYGSFSEAAARRRWPGLETLPCREATSVVAAVREGRA
                     EAGCLPIENSLIGSVTTTYDLLEEAFGDGTLRLTHEILYPVHHTLMAVPGARLEGIKR
                     VLSHPVALGQCRDWLSRHLPDAELVSAWDTAGSAEIVAQENNPALAAVAARHAADAHG
                     LLPIAERIEDDPTNQTRFLTFTRSGVELPAATGGMTRYKTSIIVLIDHKPGMLALTLQ
                     AFGVGGVNLMALQSRPERSAPWTYRFYVDVDGAATDPRVAEALEEVEALAARVVVLGS
                     YEAWVEGSRLSAPPPTPAHHTRKPDIPLVDRRRAPDGSRVQVRHLVFGGESPVLIAGP
                     CSVESEAMILETADAVAKLGGDMLRGGAYKPRTSPYDFQGLGVKGLRYLADARERTGL
                     PVVTEVLSWEEVAVVGHFADMLQIGARNMQNFSLLRAASRSGKPILLKRGAGATIEEW
                     LMAAEYVLAEGNPNVVLCERGIRTFERATRHTLDLTAVVMVRERTHLPVIVDPSHAAG
                     LRSL"
BASE COUNT          655 a         1431 c         1434 g          635 t
ORIGIN      
        1 gtacggcaac acgaccgcgg cgacgatccc gatcgcgttg gacgaatgcg tgcgggcggg
       61 gcgggtccag gagggtgatc tcgtggcgat gacggcgttc ggcagcggat ttctgtgggg
      121 gagcgccgcg gtggtgtggt agcggaaggc ggtactgggc agcggcgaaa gcgacgaggg
      181 atgttttcac ccggtaaccg gtgagaagat ccctctttcg ctcaggatga cagggctact
      241 ccgcctaccg ccttaccgcc ttaccgcctt accgccttac ggatacttac gcagatagta
      301 ctcccgattc cgcgtggcgc gggcgcgata gaggtgctcc tcctcatcct cgggatcgtg
      361 cacgaacagg tgcagggacc ccggccacag ggtggcctgg agcgaccagt tggtggaagg
      421 cgcgtgaagc acccactgca gggccccgcc gccggcatcg gtgaggtgca cctcgctcgc
      481 ccgctccagc ggaacgctgg ccgggatccc ggcgatggcc gcctcgatcg gatcgagctg
      541 cagctccgcg tcgccccacg aacggaacgt caccttgccg tgcaccgggg actcggactc
      601 cggcaactcg aactccgcct gccactctcc caacacgtcc catgcgtggt ccatgggacc
      661 gatgtccggg acttgtaccg tcggatgtct caaaggcatc gctggcctcc tccctcggat
      721 gactgggcta aggacagggt cgccacactg aatctttggg ctccggtgtt ccgtactgga
      781 acgcgacctg caactctgac cggagtaccg cacaatgaac gagttcttca tcaccctcgc
      841 ggccgggttc gccgggtatc tgctcgcacg ccgcttcatg agccgcaggc ttcggttcgt
      901 cgatgccgtc cagtccaggt tcgctcccct ggtggcggcg gtcgccgctg ccgtcgcgat
      961 ctcgccgctg accgcgctac cgctcgtaac gctaacgact gcaatggttt tcggcatcgg
     1021 ggccggtata ggcacggcca gtggggctcg cctcgtccgc cgggcggaca tggagctcag
     1081 gcgccttatc ccttgacgca aggtagcgcc tggcccggcg gcggcccgta cactggatca
     1141 catttcccgg gccgcctatc ttgccgccat ggcgcctctt cagtgccgcc ggtgcggcca
     1201 gacccgggaa ggcatggcct tccagccctt ccccaccgag ctcggccgca aggtcttcga
     1261 acagatctgc ggcgtatgct gggcggaatg gacaaagacc cagcaacagc tcatcaacca
     1321 ctacgggctc aacctccgcg atccacaggc caaggagttt ctgctccaga acatggagca
     1381 gttcctgttc cagacgcgat ccggggtctg aagcgctcgg cctttcctgg cggcgtgcct
     1441 acagtccgag cccgatccga aacacgagat ccaccgccgg ccctgccggt tccagatcct
     1501 ccgtcatccc gacccgcaac tcccggccgc cctcgccggc caggatccac ccgaaatcga
     1561 aggatagctc gcgcccgtcg agcgcgggga tgccggtgtc ccggtaatag gggctgtgca
     1621 cgaacaggtt tccgaacagc gactggcggc cccagaatcg ccagcgcagc ccgccgctgc
     1681 ccgcggcgaa gagctcgtgc tggagatcct cgagcgggcc gccggccgga gtgtagccgc
     1741 cggcgaggcc ggcctcgacc atcaggcgcg gcgtgaccgg gaggcgaagc gtgttgagga
     1801 ggctggccga gaccgcatcg cggccgtagc cgggcggtcc gctgttggtc ggcagggtga
     1861 gcgcgaggac ggtctgcagc ctggggtggg gccgaaaccc cgcaccgatg cggagatctc
     1921 cgaggaagag atcgccggga cggcggagta cggggctccg gcccggcaga tccgcggcgt
     1981 acaggaagtc gttcggcggc cgacgttccc gctccgggat ctcgatgccg agcaggtcgt
     2041 ggtaccactc gagaaagccg tccagcacgc cgtcgtaggc ccccagcagc tcggcttcgc
     2101 ccaggaggaa ggctcgcggc cccaggtcat ggtggaggcg ggcgcggagc cgcagcagct
     2161 ccgagtcgag aaagaaggcg gcacccgaga cccggttgta ctcgatggtg ctggcgtact
     2221 ccagccccac atcgacctgc caccggcccg gcgacggctc ccggaacggc tcgaagccga
     2281 gcccgctccg ggacgcggcc accgggttga tgggccggaa cgcgggaagc ccctgggccg
     2341 ccgcggcgac cggcaggagc agcgtcagaa gcagcggcag caggagcagc ggcacaccgc
     2401 aagataagtc cgggttgaca aaccggagcg ccgctccgta gcttcgctgc atggtcctca
     2461 ctcacggctc ggggttcttc tactttacca acgccggcgc ggcgctcccg ccgtccggtg
     2521 tcggcagcgt gctgtagcgc actaccgacc ggaccgcagg cgccccgccg gacttcgccg
     2581 gcggggcttt ttgttttcca tccacggagc gatgagcgta tgcgcgttgc gattcagggc
     2641 acctacgggt ccttcagcga agcggctgcc cgccggcggt ggcccggcct ggagacgctg
     2701 ccctgccgcg aggcgacgag cgtggtcgcc gcggtccgtg agggccgggc ggaggcgggc
     2761 tgcctgccga tcgagaactc gttgatcggc tcggtcacca ccacctatga cctgctcgaa
     2821 gaggccttcg gtgacggcac gctccggctg acgcacgaga tcctgtaccc ggtgcaccac
     2881 accctgatgg cggtgccggg cgccaggctc gaggggatca agcgcgtgct ctcccatccg
     2941 gtcgccctgg gccagtgccg cgactggctc agtcgccacc tgcccgacgc cgagctggtg
     3001 agcgcgtggg acacggcggg cagcgcggag atcgtggctc aggagaacaa tcccgcgctg
     3061 gccgcggtcg ccgcccgcca cgccgcggat gctcacggcc tgctgcccat cgccgagcgg
     3121 atcgaggacg accccaccaa tcagacccgc ttcctcacgt tcacccgctc gggtgtcgag
     3181 ctgccggccg cgaccggcgg catgacccgc tacaagacct ccatcatcgt gctgatcgac
     3241 cacaagccgg gcatgctcgc gctgacgctc caggcgttcg gggtgggtgg ggtcaatctc
     3301 atggcgctcc agtcgcgccc cgagcgatcg gcgccgtgga cctaccgctt ctacgtcgac
     3361 gtggatggag cggccaccga cccccgcgtg gcggaggcgt tggaggaggt cgaggcgctg
     3421 gcggccaggg tcgtggtact gggaagctac gaggcatggg tcgagggctc gcggctctcc
     3481 gcgcccccgc cgaccccggc gcatcacacc cgaaagcccg acatccccct ggtggatcgc
     3541 cggcgcgcac cggacggcag ccgagtgcag gtgcggcacc tcgtcttcgg cggtgaatcg
     3601 ccggtgctca tcgccgggcc ctgctcggtg gagagtgagg cgatgatcct ggagaccgcc
     3661 gacgccgtcg cgaagctggg cggtgacatg ctccggggcg gcgcgtacaa gccgcgcacc
     3721 tcaccctacg acttccaggg actcggcgtg aagggcctcc ggtatctggc cgacgccagg
     3781 gagcgtaccg ggcttccggt cgtgaccgag gtgttgagct gggaggaagt ggcggtggtg
     3841 gggcacttcg ccgacatgct ccagatcggc gcccgcaaca tgcagaactt cagtctgctg
     3901 cgcgccgcga gccgaagcgg gaagccgatc ctcctgaagc gcggggccgg cgcgaccatc
     3961 gaggagtggc tcatggccgc ggagtatgtc ctggcggagg ggaatcccaa cgtggtgctg
     4021 tgcgagcgcg ggatccgcac cttcgagcgc gccacccggc acaccctgga cctcactgcc
     4081 gtggtcatgg tgcgggagcg gacgcacctg cccgtcatcg tggaccccag ccatgccgcg
     4141 gggctccgct ccctg
//
LOCUS       DASUYN010000182         4823 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_500102, whole genome shotgun sequence.
ACCESSION   DASUYN010000182 DASUYN010000000
VERSION     DASUYN010000182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4823)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4823)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4823
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_500102"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..337
                     /locus_tag="VF061_03555"
     CDS             <1..337
                     /locus_tag="VF061_03555"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX6668608.1"
                     /translation="FVAVARAKGLSPRAVAVRHVLRNALIPVLTLLGLSLPALFSGAV
                     FIEAIFAWPGVGRVLVEGVVARDYPVVMAATAVSAVLVVAGNLLAELLVAWVDPRVRS
                     GARSGAGAT"
     gene            334..1185
                     /locus_tag="VF061_03560"
     CDS             334..1185
                     /locus_tag="VF061_03560"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX6668609.1"
                     /translation="MRGLWRDRRAAFGLTVLVGAALVALLAPAVAGDPIAQRDIVATR
                     FLPPLSSDLHGGFHPLGTDRFGRDVWARLAYGARVSLGVGALAVLVSVLVGVAVGAAA
                     GFWRGWRGTLLLGLTDFALALPRVVLLLLLASLWEPSAGLVILVLGLTGWMTIARLVH
                     GEVRALAVRPFVEGAVGLGASDLRVLVRHILPNAMTPVIVAAALGLGNAIMLEAGLSF
                     LGLGVQPPTPSWGNLIASGRDTLVNAPWVAAAPGVALVLVVVGATLLGDAVRDRLDPS
                     LAVRRGE"
     gene            complement(1193..1702)
                     /locus_tag="VF061_03565"
     CDS             complement(1193..1702)
                     /locus_tag="VF061_03565"
                     /inference="COORDINATES: protein motif:HMM:NF040422.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6438 domain-containing protein"
                     /protein_id="HEX6668610.1"
                     /translation="MIGRGGLLLGAALAACSPREPEPAATPAGEPSAGADAPVITLER
                     TPCFGTCPVYTVTLSRSGTVSFTGRHHVAQAGEATATVPAERVDGLLAELEAGGYFGF
                     ADAYVMDSPACGMYATDSPTVITSATRGGETKTIRHDRGCSAAPPELSRLEQRIDDVA
                     GTARWIGRD"
     gene            complement(1699..3849)
                     /locus_tag="VF061_03570"
     CDS             complement(1699..3849)
                     /locus_tag="VF061_03570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668611.1"
                     /translation="MTIRRVGSHALLALLLAACGGGSTSPSTGSLALGVSGLPSGATG
                     DLTVVGPGDFTRRVQQTQTLSGLAPGSYTVTAAGVTVGNAQYLPAPASQSVAVTGGDA
                     ASAGVVYAAVDRSLAITVAGLPAGTDAAITVSGPGGYTRAVTGSETLSPLSAGQYTLT
                     ALPVTDGTDQYTPAPASQTVSVTGAASATVTYTTGGTAGFNLRVDGVYLVQSVQTYDR
                     SVPLIRDRDALLRVFVTANQVNTAMPDVDVTLYSNGEAIAELTIPAPNPTTPLAPGEA
                     ALNSSWNVILDRSLLLSDLSIVATVDAANLVAEGDESDNTFPASGTPLPLDVRTTDPF
                     RVMFVPVITRADGRQGNVTQANRGDYLETTMRVHPLASWDATVHAAYTTDTDSVLQSG
                     NGNKAWSAILGEILTLRNTEGGTRYYYGVVNPTYSGGVAGVGYIGGPVAIGWDKAGSR
                     SGVAAHEWGHNWGRGHAPCGGAGNPDSGYPYNGGVIGVIGYDVVNEALKPADAHDLMG
                     YCSDEWISDYTYLGVMSWRSAESVSGGKAGTIQPGMLVWGRIEGGRAVLEPPVRVTAR
                     PSLPERPGPYRLEGRAEDGSMLFGFDFAPLEVADDPVGAKHFSFVVPMRTEGAVRLAS
                     VHLGGPGVRASREQASSELPTVTVTRASAGRLALRWDPSESPMLLVRDPVTGEVLSFA
                     RGGAAVVATSRDEVLVTVSGRAPRPDLRLRARPR"
     gene            4086..4463
                     /locus_tag="VF061_03575"
     CDS             4086..4463
                     /locus_tag="VF061_03575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668612.1"
                     /translation="MDETRSPQPVRPPVEELAAQTYCQRAALELAALIRHQQKPRRGT
                     RRDSALLRRCVEQVLGNGSTAPLANGPWRVDTRPLKRPGRGGLRFIPLVTRGTTTVMV
                     STPTEAEELAAFLNYCGIQDLGG"
     gene            complement(4479..>4823)
                     /locus_tag="VF061_03580"
     CDS             complement(4479..>4823)
                     /locus_tag="VF061_03580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxalase"
                     /protein_id="HEX6668613.1"
                     /translation="IRELPAERQGSWGVGSVHHIAWRVPDGDAQRTIQSSVARAGGRP
                     TEVIDRFWFQSVYFREPGGALFEVATDGPGFTVDEPTATLGERLILPPWLEPRRAEIE
                     RALPKLGAPVRT"
BASE COUNT          594 a         1752 c         1755 g          722 t
ORIGIN      
        1 gttcgtggcg gtcgcgcggg ccaaggggct gtcgccccgg gcggtcgcgg tgcggcacgt
       61 gctgcgcaac gccctgattc cggtgctcac actgctgggt ctctcgctgc cggccctctt
      121 ctccggcgcg gtgttcatcg aggcgatatt cgcctggcca ggcgtgggcc gggtgctggt
      181 ggagggtgtg gtcgcacggg attaccccgt ggtcatggcg gcgaccgcgg tgagcgcggt
      241 gctggtcgtg gccggcaacc tgctggcgga gctgctggtc gcgtgggtgg acccgcgggt
      301 gcggagcggc gcgcggtccg gcgccggcgc gacatgaggg ggctctggcg cgaccgccgg
      361 gccgccttcg gactgacggt cctcgtcggc gccgccctgg tggcgctcct cgccccggcg
      421 gtcgccggcg accccatcgc ccagcgcgac atcgtcgcca cccgctttct cccgccgctc
      481 agctccgatc tccacggcgg gttccacccg ctcggcaccg accggttcgg ccgcgacgtg
      541 tgggcccggc tggcctacgg cgcgcgggtc tccctgggcg tgggagcgct ggcggtcctg
      601 gtctcggtgc tggtgggcgt cgccgtcggc gcggcggccg gattctggcg cggctggagg
      661 ggaacgctgc tcctgggcct gaccgacttc gcgctggcgc tcccgcgcgt cgtgctgctc
      721 ctgctcctgg cctcgctctg ggagccgagc gcggggctgg tgatcctggt gctggggctg
      781 accggctgga tgaccatcgc ccgactggtg cacggggaag tgcgggccct ggcggtgcgc
      841 ccgttcgtcg agggcgccgt ggggctgggc gcgtcggatc tccgggtgct ggtgcggcac
      901 atcctgccca acgccatgac gccggtgatc gtggccgccg cactcggact cggcaatgcc
      961 atcatgctgg aggcggggct ctcgttcctc ggcctgggcg tacagccgcc cacgccgtcg
     1021 tgggggaatc tgatcgcctc cgggcgggac acgctggtca acgcgccgtg ggtcgcggcg
     1081 gcgccgggcg tggcgctggt gctggtggtg gtgggggcga cgctcctggg cgacgcggtg
     1141 cgggaccggc tggatccgtc gctggcggta cggcgcggag agtagacgcc gctcagtccc
     1201 tgccgatcca cctcgccgtg cccgccacgt cgtcgatccg ctgctccagc cgggagagct
     1261 cgggcggagc cgcggagcag ccgcggtcgt ggcggatggt cttggtttcc ccgccgcgcg
     1321 tcgcgctcgt gatcacggtc ggcgaatcgg tcgcgtacat cccgcacgcg ggcgagtcca
     1381 tcacgtacgc gtccgcgaac ccgaagtagc ctcccgcctc cagctcggcg agcagaccgt
     1441 ccacccgctc ggccggaacg gtcgccgtcg cctcgccggc ctgggccacg tggtgcctgc
     1501 cggtgaagct cacggttccc gagcgcgaga gggtcacggt gtagaccggg caggtgccga
     1561 aacagggcgt ccgctcgagc gttatcacgg gagcatccgc gcccgccgat ggctcgcccg
     1621 ccggcgtggc ggccggctcc ggctcccgcg ggctgcaggc cgccagtgcg gccccgagca
     1681 gcagccctcc ccggccgatc atcgaggccg ggcccggagc cgcaggtcgg ggcgtggcgc
     1741 ccgacccgag acggtcacca gcacctcgtc ccggctcgtc gccaccacgg ccgcgccccc
     1801 gcgggcgaag gagagcacct cccccgtcac cgggtcgcgc accagcagca tcggggactc
     1861 gctcggatcc cagcgcagcg cgaggcggcc ggcgctcgcc cgcgtcaccg tcacggtcgg
     1921 cagctccgac gacgcctgct cgcgcgaggc gcgaacgccc ggccccccga gatgcaccga
     1981 ggcgagcctc accgccccct cggtacgcat gggcaccacg aaggagaagt gcttcgcccc
     2041 cacgggatca tcggccacct ccaacggcgc gaagtcgaag ccgaacagca tgctgccgtc
     2101 ctcagcgcgg ccctcgagcc ggtagggacc cggccgctcc ggcagactcg gccgcgccgt
     2161 cacgcgtacc ggcggctcga gcaccgctcg cccgccctcg atccgtcccc acaccagcat
     2221 ccccggctga atcgtgcccg ccttcccgcc ggacacggac tcggctgagc gccagctcat
     2281 caccccgaga taggtgtagt cgctgatcca ctcgtcgctg caatagccca tgaggtcgtg
     2341 cgcgtcggcc ggcttgagcg cttcgttcac cacgtcgtag ccgatgacgc cgatgacgcc
     2401 gccgttgtac ggatagccgc tgtcggggtt gcccgcgccg ccgcagggcg cgtgcccccg
     2461 gccccagttg tgcccccact cgtgcgcggc caccccgctt cggcttccgg ccttgtccca
     2521 gccgatcgcc accgggccgc cgatgtatcc cacgccggcg accccgccgg agtaggtggg
     2581 attcacgact ccgtaatagt agcgggtccc gccctccgta ttgcggaggg tcagtatctc
     2641 gcccaggatc gcggaccagg ctttgttccc gttgcccgat tgcagcaccg aatccgtatc
     2701 ggtcgtgtac gccgcgtgca cggtcgcatc ccagctcgcc agcggatgaa cgcgcatcgt
     2761 cgtctcgagg taatcgcccc ggttcgcctg agtgacgttg ccctggcgac cgtccgccct
     2821 ggtgatcacg gggacgaaca tcacgcggaa gggatcggtg gtgcggacat cgagcgggag
     2881 cggcgttccg gacgcgggga acgtgttgtc ggactcgtcc ccctccgcga cgaggttcgc
     2941 ggcgtccacc gtggccacga tcgagaggtc cgacagcagc agcgaccggt cgaggatgac
     3001 gttccacgag ctgttgagcg ccgcctcgcc cggcgcgagc ggtgtcgtcg ggttcggcgc
     3061 cggaatggtg agttccgcga tcgcctcgcc gttgctgtag agcgtcacgt ccacgtccgg
     3121 catcgccgtg ttcacctggt tggcggtcac gaagacgcgc agcagggcgt cccgatccct
     3181 gatgagcggc acactccggt cgtaggtttg aacactctgc accaggtaca ccccatcgac
     3241 ccggaggttg aaaccggcgg tgccgccggt ggtgtaggtg acggtcgcgc tcgcggcccc
     3301 ggtgacgctg acggtctgac tggcgggcgc cggggtgtac tggtcggtgc cgtcggtgac
     3361 cggaagggcg gtgagagtgt actgtcccgc cgagagaggg ctcagcgtct cgctcccggt
     3421 gacggcgcgg gtgtatccgc ccggtccgga cacggtgatc gccgcgtcgg tgccggccgg
     3481 cagccctgcc acggtgatgg ccagggaccg gtccacggcg gcgtacacga cacccgcgct
     3541 ggcggcgtcg cccccggtca cggcgaccga ctgcgaggcc ggcgcaggca ggtactgcgc
     3601 gttgcccacg gtgacgcccg cggcggtgac cgtgtagctc cccggcgcga gtcccgagag
     3661 cgtctgtgtt tgctggactc ggcgggtgaa atcccccgga ccgactaccg tgaggtcgcc
     3721 ggttgctccg ctgggaaggc ccgacacgcc cagggcgagg ctgccggtgg agggactggt
     3781 gctgccgccg ccgcacgcgg cgagcaggag ggcgaggagg gcatgggagc cgacccggcg
     3841 gatggtcatg tggtctcgcg ttctgcgccg aatgcaatcg ggggacagcg cccgggccca
     3901 acccgctaaa ttcctcaggg tatgacggtt gtgcgggtcg gccacccccg ccgggcgccg
     3961 ggatgcgggc tccggcgccc gctgtgggca actggcgcgc caccggatgc tatgccggcg
     4021 ggcgaacggt aggtacctta ggaaaggttt cttgcgggag acttcccgcc tctggaaggt
     4081 gcccaatgga tgagacgcgt tcgccgcagc ctgtccggcc tccggtcgag gagctggcgg
     4141 cccagaccta ctgccagcgg gcggcgctgg agctggccgc cctcatccgc caccagcaga
     4201 agccgaggcg cggcacccgc cgcgattccg ctctgctccg ccgctgcgtc gagcaggtgc
     4261 tcggcaacgg cagcaccgcc ccccttgcca acggcccctg gcgcgtcgac acccgcccgc
     4321 tcaagcggcc gggtcggggc ggtctccgct tcatcccgtt ggtcacccgg ggcaccacca
     4381 ccgtcatggt ctccaccccc acggaggcgg aggagctggc ggcgttcctc aactactgcg
     4441 gcatccagga tctgggcggc taggacgcac gtcgccggct aggttctcac cggcgctccc
     4501 agcttcggca gggcccgctc gatctcggcc cggcgcggct ccagccaggg aggcaggatc
     4561 agtcgctcgc ccagggtcgc cgtcggctcg tccacggtga agccgggccc gtcggtcgcc
     4621 acctcgaaga gcgcgccgcc gggctcgcgg aagtacacgg actggaacca gaagcggtcg
     4681 atcacctcgg tcggccggcc gcccgcccgg gcgacggacg actggatggt ccgctgggcg
     4741 tcgccatccg ggacccgcca ggcgatgtgg tgcacgctgc ccacgcccca gctgccctgc
     4801 cgctccgccg gcagctcccg gat
//
LOCUS       DASUYN010000183         2777 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_719134, whole genome shotgun sequence.
ACCESSION   DASUYN010000183 DASUYN010000000
VERSION     DASUYN010000183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2777)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2777)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2777
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_719134"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1884)
                     /gene="mutS"
                     /locus_tag="VF061_03585"
     CDS             complement(<1..1884)
                     /gene="mutS"
                     /locus_tag="VF061_03585"
                     /inference="COORDINATES: protein motif:HMM:NF003810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HEX6668614.1"
                     /translation="MTRETAGSSTPPMLQHWREIKAQRPDTILFYRVGDFYEMFYQDA
                     ELAARVLEIALTSRGDGVPLAGVPVKAAAEYLRQLVSAGHRVAICEQVEDPRLAKGLV
                     RREVVETVTPGALLVDGWIPGRRNNWLTALARSRAAAQGSRLGIAAVDLSTGELILET
                     VTEEGLEEALSRLSPAELVVPAGDTHPPLPAAGPSPLVTSREPWEFDPDLARDELARR
                     FSIASLDGLGIGPEDDAALGAAGALLRYLAELQPGGLPHLARPVVRRSEAFLWLDDMT
                     RRNLELVEPLRAGAAGCTLLETLDATVTPMGGRLLRQWLLSPLRDPGAIEARLDVVDV
                     AVRDARGRARLREALDGVRDLERLAGRAAAGRAVPRELGALRDSFQRLPDVAEALSAL
                     AGFALPDGRCSVLLAEAVEELDLLADLAAELARALEDRPPPALADGGVIRPGYDAELD
                     ELRSLRDGGRRYIASLQQRERERTGIPSLKVGFNKVFGYYLEITHSHAAKVPADYERR
                     QTLASAERYVTPELKDYESKVLGAEERMAGREAELFGALRAAVGQAIGRIQRTARVLA
                     RLDVWAALAERAVAGRYVRPQVYEGFDLVLRESRHPVIERMMARESFMPNDARFTASE
                     RVLL"
     gene            1996..2208
                     /locus_tag="VF061_03590"
     CDS             1996..2208
                     /locus_tag="VF061_03590"
                     /inference="COORDINATES: protein motif:HMM:NF042755.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6677 family protein"
                     /protein_id="HEX6668615.1"
                     /translation="MAGQGSTGNVIAALASFFIPGLGQLIQGRLMRAIVMFVLAAILW
                     WFLLGWIVHLWSILDAALWKPRDVPV"
     gene            2220..2636
                     /locus_tag="VF061_03595"
     CDS             2220..2636
                     /locus_tag="VF061_03595"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX6668616.1"
                     /translation="MPQPFHFAFFVRDLDSTRRFYGEILGCREGRSTETWVDFDFFGN
                     QISAHTTGQVTPTQNTGKVEDVLVPMPHFGAILGWEQFEAIAGRIRAAGLPFVVEPRT
                     RYAGQPGEQATMFVLDPSGNALEFKSFKHREHVFTA"
BASE COUNT          384 a         1021 c          994 g          378 t
ORIGIN      
        1 gagcagcacc cgctcgctcg cggtgaaccg ggcatcgttg ggcatgaacg attcccgggc
       61 catcatccgc tcgatcaccg gatggcggct ctcccggagg acgagatcga acccctcgta
      121 cacctgggga cgcacgtagc ggccggcgac cgcccgctcg gcgagcgccg cccacacgtc
      181 gagccgggcc agcacccgcg cggtgcgctg gatccggccg atggcctggc ccaccgccgc
      241 ccggagcgcg ccgaacagct ccgcctcccg gcccgccatc cgctcctcgg cgccgagcac
      301 cttcgactcg tagtccttga gctcgggcgt cacgtagcgc tcggcggagg cgagcgtctg
      361 ccgccgctcg tagtcggccg gcaccttggc cgcgtgcgag tgggtgatct cgagataata
      421 gccgaagacc ttgttgaagc cgaccttgag cgacgggatc ccggtgcgct cccgctcccg
      481 ctgctgcagt gaggcgatgt agcggcggcc gccgtcgcgg agcgagcgca gctcgtccag
      541 ctccgcgtcg tagccgggcc ggatcacgcc gccgtcggcg agggccggcg gggggcggtc
      601 ctccagcgcc ctggcgagct cggcggcgag atcggccagg aggtcgagct cctccaccgc
      661 ctccgccagc aggacggagc agcgcccatc gggcagcgcg aaccccgcca gcgcgctcag
      721 cgcctcggcc acgtccggga gccgctggaa ggagtcgcgc agcgccccca gctcgcgggg
      781 caccgcgcgg ccggccgccg cgcggccggc caggcgctcg aggtcgcgca ccccgtcgag
      841 ggcctcgcga aggcgagcgc ggccgcgggc atcgcgcacc gccacgtcca ccacgtcgag
      901 ccgcgcctcg atcgcccccg ggtcccggag cggcgagagg agccactggc ggagcagccg
      961 cccgcccatc ggggtcacgg tcgcgtcgag cgtctccagc agggtgcagc ccgccgcgcc
     1021 ggcgcggagc ggctcgacca gctccaggtt ccggcgggtc atgtcgtcga gccagaggaa
     1081 ggcttcgctc cggcggacga ccgggcgcgc gaggtgcggc agcccgccgg gctgcagctc
     1141 cgccaggtag cggagcagcg cgcccgcggc accgagcgcc gcgtcgtctt cgggtccgat
     1201 gccgagaccg tccagcgacg cgatggagaa ccgccgcgcg agctcgtctc tggcgagatc
     1261 ggggtcgaac tcccacggct cgcgcgaggt gacgagggga gatgggcccg cggctgggag
     1321 gggaggatgg gtgtcgcccg cgggcaccac cagctcggcc gggctcagac gggagagcgc
     1381 ctcctccaac ccctcctcgg tcaccgtctc cagtatcagc tccccggtgc tgagatccac
     1441 cgcggcgatc cccagtctgg agccctgcgc ggcggcccgg ctccgcgcca gtgcggtcaa
     1501 ccagttgttg cgccggcccg ggatccagcc gtcgaccaga agggcgccgg gcgtgaccgt
     1561 ctccaccacc tcgcggcgca ccagtccctt ggcgagccgc gggtcttcca cctgctcgca
     1621 gatggcgacc cggtggcccg cgctcaccag ctgccggaga tactccgcgg cggccttcac
     1681 cggcacgccg gcgagcggca ccccgtcgcc ccgagaggtg agggcgatct ccagcacgcg
     1741 agcggccagc tcggcgtcct ggtagaacat ctcgtagaag tcgccgaccc gatagaagag
     1801 gatggtgtcc gggcgttgcg ccttgatctc ccgccaatgc tgcagcatcg gcggggtgga
     1861 ggagccggcg gtctcgcgag tcacgggcgc cggaagggga tgcgaggggg ctggcgggac
     1921 atacgctgga caatataacc cttcactccg ggggtgaccc gcatccgctt tccacttcga
     1981 actcgtgagg tgcgcatggc cggccagggc tcgaccggga acgtgatcgc cgcgctcgcc
     2041 agcttcttca tccccgggct ggggcagctg atccagggcc ggctgatgcg ggcgatcgtg
     2101 atgttcgtgc tcgccgcgat cctctggtgg ttcctgctcg gctggatcgt ccacctgtgg
     2161 tccatcctcg acgcggcgct gtggaagccg cgcgacgtcc cggtttgagg ggagagcccg
     2221 tgccgcagcc cttccatttc gcgttcttcg tccgcgacct cgattccacc cgccgattct
     2281 acggcgagat cctcggctgc cgtgaaggcc gcagcaccga gacctgggtg gacttcgact
     2341 tcttcggcaa ccagatctcg gcccacacca ccggccaggt gacgccgacc cagaacaccg
     2401 gcaaggtcga ggacgtcctg gtgcccatgc cgcacttcgg ggccattctc gggtgggagc
     2461 agttcgaggc gatcgccgga cggatccgcg ccgccggcct gcccttcgtg gtcgagccgc
     2521 ggacccgcta cgccgggcag cccggcgagc aggccacgat gttcgtgctc gatcccagcg
     2581 gcaacgcgct cgagttcaag agcttcaagc accgggagca cgtcttcacc gcatgacgac
     2641 ggcttcggtc gccgtgatcg gcggtggggt gatgggcgcg agcgtcgcgt accacctcgc
     2701 ggcccgcggc tggcgtgagg tggtgattct cgaccgcggc gccggccccg gggagggaag
     2761 caccggccgc gccaccg
//
LOCUS       DASUYN010000184         2424 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_57867, whole genome shotgun sequence.
ACCESSION   DASUYN010000184 DASUYN010000000
VERSION     DASUYN010000184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2424)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2424)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2424
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57867"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..419
                     /locus_tag="VF061_03600"
     CDS             <1..419
                     /locus_tag="VF061_03600"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEX6668617.1"
                     /translation="VLITDGANNTGQPTPFVAAEAARALGVRIHTVGVSAPDTSAIDD
                     GFIWREGRTPDRLTSSDEAVLRRIADRSGGRYFRATDPDALERIMTEIDPLERTDVRI
                     AQTRDYRELFLWTLVPGLLLLAGDLLLRATRLRGLP"
     gene            427..2202
                     /locus_tag="VF061_03605"
     CDS             427..2202
                     /locus_tag="VF061_03605"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEX6668618.1"
                     /translation="MSFASPGVLLLLLTALPAAAWLALRAERRRRAALEAFGAPPVLA
                     RGSSLPRKTRTRLLLRLAALALGIVALARPQLGERRSELARTGRDILVLLDLSRSMNA
                     SDVGGTRLAAARRLGWETVSASPGDRVGLIVFGGSAFLQLPLTSDQAAFRLFLDAASS
                     DDLGDPATDLSAALRTAVKTFEHEGEEGRRAVLVLSDGESGEGDMDAALDEVRLAGLS
                     VFAIGVGSSTGGPMPADSADLPDPYHRDHIGRVVVTRLEEEDLRRAAEATGGRYARWD
                     RPEELGQLRAGIAAIQPRTLATREGRQLADRYQWPLALTVVLLLAELLVGGDLGRGRT
                     GRRPPASSRRSAAEPGDRAPASRAIPAPALRAILLTGAAALGCAGVRAGERHYVRGEY
                     AEAYEAFRRAQASDSSARLAYNVGNALYRLERYEPAARSFRAAAKAARTPEERGRALY
                     NLGNAMVRAAEERPTEAEPLLEAVAAYEAVLQLDPGNADAQWNLEIALRRLGDDRVSG
                     GTSGRGRNADYGQGNMNVSGYEGTPDAAVGAMAGGGFGSAEGESVEELSAEEARQLLD
                     AVQRQQLTSHEGRPSQRGPVGERDW"
     regulatory      2251..2324
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00521"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="SAM riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00521"
BASE COUNT          309 a          872 c          930 g          313 t
ORIGIN      
        1 tcgtgctcat caccgacggc gccaacaaca ccgggcagcc caccccgttt gtggccgcgg
       61 aggccgcacg ggcgctcggg gtgcggatcc acacggtggg ggtgagcgcg ccggacacca
      121 gcgccatcga cgacggcttc atctggcgcg aggggcgcac ccccgaccgg ctcaccagct
      181 cggacgaggc ggtgctgcgc cggatcgccg accggagcgg cggacgctat ttccgcgcca
      241 ccgacccgga cgcactggag cggatcatga cggagatcga tccgctcgag cgcaccgatg
      301 tccgcatcgc gcagacacgg gactatcggg agctcttcct ctggacgctg gtgccggggc
      361 tgctgctcct ggccggcgat ctgctgctcc gggccacccg gctccggggg ctgccgtgag
      421 cgcgcgatga gcttcgcctc tcccggggtg ctcctgctgc tgctcaccgc acttcccgcg
      481 gcggcgtggc tcgcgctccg ggcggagcgc cgccgccggg cggcgctgga agcgttcggc
      541 gcgcctccgg tcctggcccg cggctcctcg ctgccgcgga agacccgcac ccggctgctg
      601 ctccggctcg ccgccctcgc gctcggcatc gtggcgctgg cccgacccca gctcggcgag
      661 cggcgcagcg agctcgcccg caccggccgc gacatcctgg tgctgctgga tctctcccgc
      721 tcgatgaacg cgagcgatgt gggcggcacc cggctggccg cggcgcggcg cctcggctgg
      781 gagacggtct ccgcgtcgcc cggtgaccgg gtggggctca tcgtgttcgg cgggagcgcg
      841 ttcctccagc ttccgctcac ctcggatcag gcggcgttcc ggctctttct cgacgcggcg
      901 agcagcgacg acctgggcga cccggccacg gatctctccg ccgcgctccg cacggcggtc
      961 aagaccttcg agcacgaggg cgaggaagga cggcgcgcgg tgctggtgct gtccgacggg
     1021 gagagcggcg agggcgacat ggacgcggcg ctcgacgagg tccggctcgc cgggctgtcg
     1081 gtcttcgcga tcggggtcgg cagcagcacc ggcggtccga tgccggcgga cagcgcggac
     1141 ctgcccgatc cgtatcaccg cgatcacatc ggccgcgtgg tggtcacccg gctcgaggag
     1201 gaggacctcc gccgcgccgc agaagccacc ggcgggcgct acgcgcggtg ggatcgtccg
     1261 gaggagctgg ggcagcttcg agccggcatc gcggcgatcc agccgcggac gctcgccacg
     1321 cgcgaggggc gccagctcgc cgaccgctac cagtggccgc tggcgctgac ggtggtgctg
     1381 ctgctggcgg agctgctcgt cggcggggac cttggccgcg ggcggacggg gcggcggccg
     1441 ccagcgtcct cgcggcggtc ggcggccgaa cccggtgacc gggcgcccgc ctcgcgcgcc
     1501 atccccgccc ccgcgctccg cgccatcctg ctgaccgggg ccgcggcgct cgggtgcgcc
     1561 ggcgtgcgcg ccggtgagcg gcactacgtc cgcggcgagt acgccgaggc gtacgaggcg
     1621 ttccgccggg cgcaggcgag cgacagcagc gcgcgtctgg cctacaacgt gggcaacgcg
     1681 ctctaccggc tggagcgcta cgagcccgcg gcgcgctcct tccgggcggc agccaaggcc
     1741 gcgcggacac cggaggagcg cgggcgggcg ctgtacaatc tgggcaatgc gatggtccgc
     1801 gcggcggagg agcggcccac cgaggccgag ccgctgctgg aggcggtggc ggcgtacgaa
     1861 gcggtgctcc agctcgaccc gggcaatgcc gatgcccagt ggaacctgga gatcgccctg
     1921 cgccgcctgg gcgacgaccg ggtgtcgggc ggcacctcgg gccggggccg caacgccgac
     1981 tacggccagg gcaacatgaa cgtctccggc tacgagggaa cccccgacgc cgcggtgggc
     2041 gcgatggccg gcggcgggtt cggctcggcc gagggcgagt cggtggagga gctgagcgcc
     2101 gaggaggcgc ggcagctgct cgacgccgtg cagcggcagc agctcaccag ccacgagggc
     2161 cggcccagcc agcgcggccc ggtgggcgag cgcgactggt agccccgggg gttgcgcggg
     2221 cggggccgat ggcataacct atcgggacaa tcgacgtctc gtggtcattt gcggcgtatt
     2281 gcagccacgt taaacaaatg ctaaaaagcc tcgcgtcccg cgtgtctttt tggcaccggg
     2341 cgcttttttc gttgcgccag tgccgaaggc ggtgggtgga ggcaaaggaa aggaccaatg
     2401 gcctccgcag ccccaacgct cccc
//
LOCUS       DASUYN010000185         4777 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_500492, whole genome shotgun sequence.
ACCESSION   DASUYN010000185 DASUYN010000000
VERSION     DASUYN010000185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4777)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4777)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4777
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_500492"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(155..943)
                     /locus_tag="VF061_03610"
                     /pseudo
     CDS             complement(155..943)
                     /locus_tag="VF061_03610"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
     gene            1218..2744
                     /locus_tag="VF061_03615"
     CDS             1218..2744
                     /locus_tag="VF061_03615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668619.1"
                     /translation="MLRIGEPGHDHGELVPAESGDLGIHRGPGRTDLILALAARGPQP
                     PRHLLEQVVPRFMAQGVVDPAEMVEIDEERRQSGVIALGLLQGAGEALLVGKAVGEAG
                     ETVVVREGADLLQHPGVHQRDGRLIREPPDLHPCVGDRRLLGVVGQHDHAHQLSVEPQ
                     REHETPGVAPLHQGRDERRRRLAGGGHDGQCAGSVEQLLHVLRSKVHPHAVTAAEPVV
                     VDQAGQRLGPVRRHERDAHRLAGVDVAKAREERGDDVSDTGGREHRPIDLGGGRERLE
                     LAVELGGHGIEGGTQVLELVPATDLDPAAEVPARDPPGAFSQLGERYEAAPDPADAQH
                     HDECHGGEHDECQLLREAHDGAHDMGPRLPQGEVPGRRGEDFVQEDGPGRGHVGLDFE
                     GCDGVGRQRRVEPQGLEAGLDARDRADEDVSAVVLHRQDGAGGDQALIEGRPEVVGID
                     LTDEETAHALTIGAFAHPADQVGAGEPSLTMVHRDERKTVLEIAAGLLSERGMAVRRA
                     "
     gene            complement(3222..3998)
                     /locus_tag="VF061_03620"
     CDS             complement(3222..3998)
                     /locus_tag="VF061_03620"
                     /inference="COORDINATES: protein motif:HMM:NF016367.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(5-formylfuran-3-yl)methyl phosphate synthase"
                     /protein_id="HEX6668620.1"
                     /translation="MPLLVSVRSGEEVAAALEGGAGIIDAKEPARGSLGAVDPDVLAA
                     IAGRTPATVPLSVALGDCVGVEQARAAVSSAPLPERSAPVYLKLGFAGLPPAQRITAL
                     LEVARRSVAGRTARVVAVAYADHGAAHAPAPEDVLRAAVTAGASGLLVDTWRKDGRGL
                     LDHVPLERLAGLSARARAAGMVFAVAGSLDITAIARLAAIADVIGVRGAACRGGRSGT
                     VDAGLVRGLRRCLEHARAGGAPEVARLNPGARVRLAEREA"
     gene            4082..>4777
                     /locus_tag="VF061_03625"
     CDS             4082..>4777
                     /locus_tag="VF061_03625"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX6668621.1"
                     /translation="MTLEGRSVVVTGGSSGIGRAIAGRCAAAGADVLITYRRNRRGAD
                     ETAAELSRTGRQVVVQQADITREQDITDLARRAREALGRVDVWINNAGADILTGAAGE
                     LPPREKLDLVLAVDVRGTVLASWEAAKLMREQGDGGVIINISWDHVTLGMAGENPVLY
                     SVAKGAVMSFSKSFAREVAPDIRVNILAPGFIETAFGQEANPRFRDEVVALTPLQRWG
                     TPDDVAAAAVFLAS"
BASE COUNT          719 a         1657 c         1697 g          704 t
ORIGIN      
        1 gttcgtggcc ggtgcgctcg atgccgcccg gctggtgctg gtcaagccgg ccgaggtggg
       61 agaggccggg gtggatggct gcttcgcgct ggtggtgccg gccgggctgg acgtgaaggt
      121 ggtggggtgg gagcggttcg cggggcaacc gatgtcatcc tgacacgccg ctcgcggtga
      181 acccgcgctc cccccgtgtc gcggagcgtc ggcccgcccg acccagcttc cgctcccgca
      241 gcagctcggc cagcgcatcc gccggcagcg ggcggctgaa gaagtaaccc tgcagctggt
      301 cgcaaccctg cttccgcagc agctccacct gctccccggt ctcgacaccc tccgccgtca
      361 cggtgaggcc cagcgcgtgt cccagcgcga tgatcgctgc cgagatcgcg gcatcgtccg
      421 gctcgctggt gatctcgcgg acgaaggccc ggtcgatctt gagggtgtcc agtggaaagt
      481 gcttcaggta gctgaacgag gagtacccgg tcccgaagtc gtccacggag agatggaggc
      541 ccatggcgcg gagggcgtgc aggatgtcgg tcccttcctt ctgatggttc accagcacgc
      601 tctcggtgag ctccagcccg aaatagcgcg cctccagtcc ggtctcctgc agaatgcgct
      661 cgacgctctc ggccacggtg cgggtcagct gtcggctgga gaggttcacc accacccgga
      721 tgggcgccat ccccgcctgc tgccaggcga ggttctgggc acaggccgtc cgcatcaccg
      781 attcccccag cggcacgatc aggccgttct cctccgccag cccgatgaac tccgacggtg
      841 gaagcagccc gaggtcgggg tggcgccagc gcacgagcgc ctcggctgcc accactgctc
      901 cgctcgcccc gctgacgatc ggctggtaat ggacctcgaa actcctggcg ctccagcgct
      961 cgtcgcagcg agttctccag cgtcagccgc tggagcgcgg tggcgttcat ggagcgcgag
     1021 tacgcctggt agctgttgcc accctgctcc ttcgccttgt acatggcggt gtcggcgtgc
     1081 atcagcagcg tctcgaggtc cttcccgtcg aagggataca cggcgatgcc gatgctggcg
     1141 ttcacgaaga tctcgcggcc attgagcctg aaggggtgcg ccagactggt cagaatgcgc
     1201 ctcgcgagct tggcggcgtg ctccggatcg gagagcccgg gcatgatcac ggtgaactcg
     1261 tccccgccga gtcgggcgac ctggggatcc accgcggccc tggccggacc gacctcatcc
     1321 tcgcgctcgc ggcaagaggc ccgcagccgc cccgccacct gctggagcag gtggtccccc
     1381 ggttcatggc ccagggtgtc gttgatccgg ctgaaatggt cgagatcgat gaagagcgcc
     1441 gccagtcggg tgtcatcgcg ctgggcctgc tccaaggcgc tggcgaggcg ctccttgtag
     1501 gaaaggcggt tggggaggcc ggtgagactg tcgtagtacg cgagggtgcg gacctgctcc
     1561 agcatccggg cgttcaccag cgcgacggcc gcctgatccg cgagccgcct gatctgcacc
     1621 cgtgcgtcgg cgaccgccgg ctcctcggcg tggtcggcca gcacgatcac gcccaccagc
     1681 tgagcgtgga accgcagcgg gagcacgaaa cacctggtgt agccccgctc caccaggggc
     1741 gcgacgaacg gcgccgccgg ctcgccggcg gcggccacga cggtcagtgt gccgggtccg
     1801 tggagcagct cctgcacgtg ctccgatcga aggtccaccc gcacgcggtc acggctgccg
     1861 agccggtagt cgtggaccag gctgggcagc gacttggccc cgtccgccgc catgagcgtg
     1921 acgcacaccg cctcgcaggg gtagacgtcg cgaaggcgcg cgaggagcgc ggcgacgatg
     1981 tctccgacac tggtggccga gagcaccgcc cgatcgatct cggcggcggt cgcgagcgcc
     2041 tggaactggc ggtcgagctg ggcggccatg gcattgaagg aggcacccag gtcctcgaac
     2101 tcgtcccggc tacggatctg gacccggctg ctgaagtccc tgcccgcgat cctccgggtg
     2161 ccttctcgca gctcggcgag cggtatgagg ctgcgccgga tccggctgat gctcagcacc
     2221 acgacgagtg tcatggaggc gagcacgacg agtgtcagct tctccgtgaa gcgcacgacg
     2281 gggcccatga catgggtccg cgactgcccc agggcgaggt tccaggtcgg cgcggcgaag
     2341 acttcgtcca ggaggatggg ccaggtcgag gacacgtagg gctcgacttc gaaggctgcg
     2401 atggagtcgg ccgccagcgg cgcgtcgagc cccagggcct ggaagctgga ctggatgccc
     2461 gcgatcgagc ggacgaggac gtgtccgctg tcgtccttca ccgtcaggat ggtgccgggg
     2521 gtgatcaggc cctgatcgaa ggtcgcccag aggtagtcgg cattgatctc accgatgagg
     2581 agaccgctca cgcccttacg atcggggcct tcgcgcatcc ggcggaccag gtaggcgcgg
     2641 gtgagccctc cctcacgatg gtccaccgcg atgagcggaa gaccgtgctc gagatcgccg
     2701 cgggcctgct ctccgagcgc gggatggcgg tccggcgcgc ctgacagcgg gacccgtctc
     2761 ccgtcgtccc ccacgaattc gagggccgtg aagcgacggg tcagcgaggg atcgagggcg
     2821 agggcctgcg agccgcccgc gggattgccg atggcctggg caacggtctc tggcgagatg
     2881 ttcttgaagg tggcatccag caacaggagg cgctcgaaga tagcggcgcc gaaggccttg
     2941 caggcctggt gcaggcgggc ctcgctctgg gcgatcagat atcgggtcac gtgccggtac
     3001 gacagcgtcg ccaccagggc ggtgggcagg acggcgcacc ccacgaagag caggagcagt
     3061 cggcggccga acctgctggt caggggtccc aggcgacgcg agtaatccat tggctcggcg
     3121 agttgaggct cccgccgtgg ggcaatactt atgcccgcac gaggtcacgc ctccgagccc
     3181 gtgacccacg ctcacgcgcc gaacgcaccg ccccggtggg gtcaggcctc gcgttctgcc
     3241 aagcgcaccc gcgcgccggg attcagtctc gcgacctcgg gggcaccgcc cgcccgcgcg
     3301 tgctccaggc agcgtcgaag cccgcgcacc aatccggcat ccaccgttcc gctccggcca
     3361 ccccggcagg cggctccccg gacgccgatg acatccgcga tcgccgccag gcgtgcgatg
     3421 gcggtgatgt ccaggcttcc ggccaccgcg aagaccattc cggcggcgcg cgcgcgcgcc
     3481 gaaagcccgg cgagacgctc gagcggaacg tggtccagca gtccgcggcc atccttccgc
     3541 caggtatcca ccagcagccc gctcgcgccc gccgtgaccg ccgcccgcag cacgtcctcg
     3601 ggcgccgggg cgtgcgccgc gccgtggtcg gcataggcga cggccaccac ccgagcggtt
     3661 cgtcccgcga ccgatctccg cgcgacctcc agcagggcgg tgatccgctg ggcgggcggc
     3721 aggcccgcga agcccagctt caggtacacc ggggcgctcc gctccggcag tggtgccgag
     3781 ctcaccgccg ccctggcctg ctccacaccg acgcagtctc ccagcgcgac gctgagcggc
     3841 accgtggccg gcgtgcgccc ggcgatggca gccagcacat cggggtccac cgcgccgagc
     3901 gagcctcgcg ccggctcctt ggcgtcgatg atgccggcac cgccctccag tgcggccgct
     3961 acctcctccc cgctgcgcac gctgaccagc aacggcatca ccgctccctt gtgagatgct
     4021 aaggctctga tatgttagga tttatgaagt tactccaagc cgggtgcgga agcgaggcgg
     4081 cgtgaccctc gagggcagga gcgtggtggt gaccggcggg tcgagcggca tcggccgcgc
     4141 cattgccggt cgctgcgccg ccgccggcgc cgacgtcctc atcacctatc gccgcaaccg
     4201 ccgcggagcg gatgaaacgg cggcggagct gtcccgcacc ggccgccaag tcgtggtgca
     4261 gcaggccgac atcacgcgcg agcaggatat caccgacctc gctcggcggg cgcgcgaggc
     4321 cctcggtagg gtggacgtgt ggatcaacaa cgccggcgcc gacatcctga ccggagcggc
     4381 cggcgagctg ccgccgcggg agaagctcga cctcgtgctt gcggtggacg tgcggggaac
     4441 cgtgctggca tcgtgggaag ccgcgaagct gatgcgggag cagggagacg gcggggtcat
     4501 catcaatatt tcgtgggacc acgtcaccct cggcatggcc ggcgaaaacc cggtgctcta
     4561 ttcggtggcc aagggggcgg tgatgagctt cagcaagtcg ttcgcgcgcg aggtggcgcc
     4621 ggacatccgg gtcaacatcc tggcgccggg gttcatcgag accgcgttcg gccaggaagc
     4681 caatcctcgc ttccgcgacg aagtggtcgc gctgacgccg ctgcagcgct ggggaacccc
     4741 ggacgacgtc gccgccgccg cggtcttcct cgcgtcc
//
LOCUS       DASUYN010000186         2192 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1602124, whole genome shotgun sequence.
ACCESSION   DASUYN010000186 DASUYN010000000
VERSION     DASUYN010000186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2192
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1602124"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(157..477)
                     /locus_tag="VF061_03630"
     CDS             complement(157..477)
                     /locus_tag="VF061_03630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668622.1"
                     /translation="MRVAELRHLFNAMDPAPLLARDLDPTVPGFIVALVLPGILPEVL
                     RGGMAGVASESLFIGGWVAMWRPLEVFLYDWWPIRAEARRLDRLAAMPVGIGEAPGEA
                     PESR"
     gene            620..>2192
                     /gene="atpA"
                     /locus_tag="VF061_03635"
     CDS             620..>2192
                     /gene="atpA"
                     /locus_tag="VF061_03635"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HEX6668623.1"
                     /translation="MATDTTLRPGELKNILLHEIQSADLSADDVSEVGTVLEVRDGVA
                     RIYGLNSAVASEMLEFTAQETGETVAGLVLNLEEDNVGAAIMGDYLKLKEGDQVRRTG
                     RLLDVPVGPAMLGRVVDALGRPVDGRGEIKTSRTRQVEMVAPGIIVRQPVKEPLQTGI
                     KAIDAMIPIGRGQRELIIGDRGTGKTAIAIDTIINQRGAGVVCVYIAIGQKRSTVATV
                     VERLKQAGAMDYTIVVVASASEPAPLQYIAPYAGCAIAEYFMYEEGKATLCVYDDLSK
                     QAAAYRQLSLILRRPPGREAYPGDVFYLHSRLLERAAKISEDKDVVRLDERIKKPGGS
                     LTALPIIETQAGDVSAYIPTNVISITDGQIFLTTDLFYSNVRPAVDAGISVSRVGGNA
                     QIKAMKQVAGPLRLSLAQYRELEAFAQFGSDLDAATQKQLARGARLVEVLKQPQYQPV
                     PVEKQVAIIYAVTNGYLDDVDLKQIRQWERDFLEYVANAPGNILEGIRTRKALDAELT
                     ASLKAAIDAFKPLFRA"
BASE COUNT          373 a          757 c          747 g          315 t
ORIGIN      
        1 catccccacc gtggtgaagt tgctgcactt cgcgtcgtcg agccacctga gcggcaccgc
       61 ccggcggatc gcgaacgtct ccaccagcgg gctcggcggc ctggggcccc ggggcgtgct
      121 ccaggcgttc gcccggggaa acacgcggag ccggacctag cggctctccg gcgcttcccc
      181 gggggcctcc ccgatcccta caggcatggc cgccaaccgg tcgaggcgcc gggcctcggc
      241 gcggatcggc caccagtcgt agaggaacac ctcgaggggc cgccacatcg ccacccaccc
      301 gccgatgaac aggctctcgc tcgctacgcc ggccatgccg ccccgcaaca cctccgggag
      361 gatccccggg aggaccaaag ccacgatgaa cccggggacg gtcgggtcga ggtcccgggc
      421 gaggaggggt gccgggtcca tcgcgttgaa caggtggcga agctcggcga cgcgcacctc
      481 gatggcgcat agctgccccc tgaccgggtg tccgactatt cttgcaggcc ggctcgacgt
      541 cttgcctcac tccgggtttt gtgattaatt tcacaagcta ggtcacaacc aggtccattc
      601 agccagggca gccccataca tggccactga tactaccctc cgtcccggcg aactcaagaa
      661 catcctgttg cacgagatcc agtcggcgga cctgtccgcg gacgacgtgt ccgaagtcgg
      721 aaccgtgctc gaggtgcggg acggagtcgc ccggatctac ggactcaact ccgcggtcgc
      781 cagcgagatg ctggagttca ccgcccagga gaccggggag acggtcgcgg ggctggtgct
      841 gaacctggag gaggacaacg tcggcgccgc gatcatgggc gactacctga agctgaagga
      901 gggcgatcag gtgcgccgca cgggccggct gctcgacgtg ccggtgggtc cggccatgct
      961 gggccgggtg gtggacgcgc tcgggcggcc ggtggacggg cggggcgaga tcaagacctc
     1021 gcggacccgg caggtcgaga tggtggctcc gggcatcatc gtccggcagc cggtgaagga
     1081 gccgctccag accggcatca aggccatcga cgcgatgatt cccatcggcc ggggccagcg
     1141 cgagctgatc atcggcgacc gcggcactgg caagacggcc atcgcgatcg acaccatcat
     1201 caaccagcga ggcgccggcg tcgtctgcgt ctacatcgcc atcggtcaga agcgctccac
     1261 cgtggccacg gtggtcgagc ggctcaagca ggcgggtgcg atggactaca ccatcgtggt
     1321 cgtcgcctcg gcgtcggagc ccgcgccgct gcagtacatc gccccgtacg ccggctgcgc
     1381 catcgccgag tacttcatgt acgaggaggg gaaggccacg ctctgcgtgt acgacgacct
     1441 gtccaagcag gcggcggcgt accgccagct ctcgctgatc ctgcggcggc cgccggggcg
     1501 cgaggcgtac ccgggggacg tgttctacct ccacagtcgt ctcctggagc gcgcggccaa
     1561 gatctccgag gacaaggacg tggtgcggct ggacgagcgg atcaagaagc cgggggggtc
     1621 gctcaccgcg ctacccatca tcgagaccca ggcgggcgac gtctccgcgt acatcccgac
     1681 caacgtcatc tcgatcaccg acgggcagat cttcctcacg accgacctct tctactccaa
     1741 cgtccgtccc gcggtggacg ccggcatcag cgtgagccgg gtgggcggca acgcccagat
     1801 caaggcgatg aagcaggtgg ccggtccgct gcggctctcg ctggcgcagt accgcgagct
     1861 ggaggccttc gcccagttcg gctccgacct cgacgccgcc acccagaagc agctggcccg
     1921 cggcgcccgg ctggtcgagg tgctcaagca gccccagtat cagccggtac cggtcgagaa
     1981 gcaggtggcc atcatctacg cggtcaccaa cggctacctg gacgatgtcg atctcaagca
     2041 gatccggcag tgggagcggg atttcctcga gtacgtggcc aacgccccgg ggaacattct
     2101 cgagggcatc cgcacccgga aggcgctcga cgccgagctg acggccagcc tcaaggccgc
     2161 gatcgacgcg ttcaagccgc tgttccgggc cg
//
LOCUS       DASUYN010000187         2511 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_58414, whole genome shotgun sequence.
ACCESSION   DASUYN010000187 DASUYN010000000
VERSION     DASUYN010000187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2511
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58414"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1928)
                     /gene="dxs"
                     /locus_tag="VF061_03640"
     CDS             complement(<1..1928)
                     /gene="dxs"
                     /locus_tag="VF061_03640"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: protein motif:HMM:NF003933.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009240 - isopentenyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HEX6668624.1"
                     /translation="MSLLATIQSPADLKRLKREQLPQLAQEIRDRLIECCSITGGHIG
                     ASLGVVELTVALLYEFDSPADKIVWDVGHQAYAWKLLTGRNEPFPTLRQRDGISGFLK
                     RDESEHDQFGAGHAGTAVSAAFGMATARDLRGEAHKVVAILGDGALTCGLSYEGMNNA
                     GHSDRDIILIVNDNGMSISPNVGAISKMLGRIVADPRTNRLREKIKGMTFALGGVFGE
                     GVVDFAKNVEESVKNLFSPGMLFEELGFRYFGPIDGHDLGKLCDTLQFVRGMHGPRVV
                     HVMTQKGKGFSYAEANQEKWHGLAAYDPVTGEARKKASGPPTWTQVFGEGLTAVAADH
                     PELVAITAAMPSGTGTSIFQKTYPDRFFDVGIAEGHAVTFAGGLATQGIRPVVAIYST
                     FLQRAYDNVIHDIAVQKLPVTFCMDRAGLVGEDGQTHMGLYDIAYMLAVPGMTVTAPK
                     DGDELVGLLRTAMTHTGGPFCTRYPRDKAPAEPGDPSAVPAVPYGSWEQLREGREDVA
                     ILAVGTMVAPAVQAAELLARDGVDCAVVNCRFLKPLDTAMLESLVQRHRILVTVEEGT
                     IVNGFGAYLAETLQTTHPEVRVVALGVPDRLVEQAPRADQLAGPERTQPLLRVQRHPP
                     LRGEAGDVLQDRLEVPVPR"
     gene            complement(2013..>2511)
                     /locus_tag="VF061_03645"
     CDS             complement(2013..>2511)
                     /locus_tag="VF061_03645"
                     /inference="COORDINATES: protein motif:HMM:NF012568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HEX6668625.1"
                     /translation="LELPASALGRMAVELFRSGGIRGMVGGQWLDLEAEGRTLALTDL
                     ITVHRGKTGALIRASCTLGAIAAEARPDEVAALTDYGEDVGLAFQIADDVLDATGTSE
                     ELGKTAGRDAQLAKSTYVSVMGVEAARAEAERLARRAVEHLDSAGVPSGALGALARYI
                     VTRKS"
BASE COUNT          344 a          911 c          858 g          398 t
ORIGIN      
        1 cgcggtaccg ggacctcaag tcggtcctgg agtacgtcac ccgcctcgcc ccgaagcggg
       61 ggatgacgct gtacgcggag gagcggctga gtccgttctg gcccggcgag ctggtccgcg
      121 cgcggcgcct gctccaccag ccggtcgggg acgccgaggg cgaccacgcg cacctcgggg
      181 tgcgtcgtct gcagcgtctc ggcgaggtag gcgccgaagc cgttcacgat ggtcccctcc
      241 tccaccgtga ccaggatccg gtgccgctgg accagcgact ccagcatcgc cgtgtccagc
      301 ggcttgagga agcggcagtt caccacggcg cagtccaccc cgtcgcgcgc caggagctcg
      361 gccgcctgca ccgccggcgc caccatggta cccacggcga ggatggcgac gtcctccctg
      421 ccctcgcgca gctgctccca gctcccgtac ggcaccgcgg gcacggcgga cggatcgccc
      481 ggctcggcgg gcgccttgtc gcgggggtag cgggtgcaga agggcccgcc ggtgtgcgtc
      541 atcgcggtgc ggagcagccc caccagctcg tcgccgtcct tcggcgccgt gaccgtcatc
      601 ccgggcaccg caagcatgta ggcgatgtcg tagagaccca tgtgggtctg gccgtcctcg
      661 cccaccagtc ccgcgcggtc catgcagaac gtcaccggca gcttctggac cgcgatgtcg
      721 tggatgacgt tgtcgtaggc gcgctgaagg aacgtgctgt agatcgcgac cacgggccgg
      781 atgccctgcg tcgcgaggcc ccccgcgaag gtgaccgcgt gcccctccgc gatgcccacg
      841 tcgaagaagc gatccgggta cgtcttctgg aagatgctgg tgcccgtgcc gctgggcatc
      901 gcggcggtga tcgccaccag ctccgggtgg tccgccgcga cggcggtgag accctcgccg
      961 aagacctggg tccaggtcgg tgggccgctg gccttcttgc gcgcctcgcc cgtcaccggg
     1021 tcgtaggccg ccagcccgtg ccacttctcc tggttcgcct cggcgtagga gaagcccttc
     1081 cccttctgcg tcatgacgtg caccacccgg ggcccgtgca tcccgcgcac gaactggagg
     1141 gtgtcgcaca gcttgccgag atcgtgcccg tcgatcgggc cgaagtagcg gaagcccagc
     1201 tcctcgaaca gcatgccggg ggagaagagg ttcttgacgc tttcctccac gttcttggcg
     1261 aagtccacca ccccctcgcc gaacaccccg cccagcgcga aggtcatccc cttgatcttc
     1321 tcccgcagcc ggttggtgcg ggggtcggcc acgatgcggc ccagcatctt gctgatcgcg
     1381 cccacgttgg gcgagatgga catcccgttg tcgttcacga tcaggatgat gtcccggtcg
     1441 gagtggccgg cgttgttcat cccctcgtag gagaggccgc aggtgagggc gccgtcgccc
     1501 aggatggcca cgaccttgtg cgcctcgccg cggagatccc gcgcggtcgc catgccgaag
     1561 gcggcggaga ccgccgtccc cgcgtgtccg gcgccgaact ggtcgtgctc gctctcgtcc
     1621 cgcttgagga agccggagat gccgtcgcgc tgccgcagcg tggggaaggg ctcgttccgg
     1681 ccggtgagga gcttccaggc gtaggcctgg tggcccacgt cccagacgat cttgtcggcg
     1741 ggcgagtcga actcgtagag cagcgcgacg gtgagctcga ccacgccgag gctggcgccg
     1801 atatggccgc cagtgatcga gcagcactcg atcaaccggt cgcggatctc ctgcgccagc
     1861 tgggggagct gctcgcgctt gaggcgcttg aggtcggcgg gagactggat ggtcgcgagc
     1921 aggctcatcg tcgttcttcc tgtgtcatcc tgagcgaagc gaaggggacc atgccggaat
     1981 ggcccccttc gcttcgcgca gggtgtgaac gtctacgatt tcctcgttac aatatacctg
     2041 gccagcgccc ccaacgcccc gctcggcacc ccggccgaat cgaggtgttc caccgcccgg
     2101 cgcgcgagcc gctccgcctc cgcgcgggcg gcctccaccc ccatcacgct cacgtaggtg
     2161 gacttggcga gctgcgcgtc ccgcccggcc gtcttcccca gctcctcgct cgtcccggtc
     2221 gcgtccagca cgtcgtcggc gatctggaag gccaggccca cgtcttcgcc gtagtccgtc
     2281 agcgcggcga cctcgtcggg ccgcgcctcg gcggcgatcg cgcccagcgt acaggaggcc
     2341 cggatcaggg ctccggtctt tccccgatgg acggtgatga ggtcggtgag cgccagcgtc
     2401 cggccctccg cctccaggtc cagccactgg ccgccgacca tgccccggat gccccccgag
     2461 cggaacagct cgaccgccat gcgccccagg gcggaggccg gcagctcgag g
//
LOCUS       DASUYN010000188         3117 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_721948, whole genome shotgun sequence.
ACCESSION   DASUYN010000188 DASUYN010000000
VERSION     DASUYN010000188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3117)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3117)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3117
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_721948"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..276
                     /locus_tag="VF061_03650"
     CDS             <1..276
                     /locus_tag="VF061_03650"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HEX6668626.1"
                     /translation="WAAGVSDADIVAGIRLLAETTGIFTETAGGATVSGALALAGAGR
                     LGPDDEVVLCITGNGLKTVEALQGVLPEAPVIAPRLKELEALYGRDL"
     gene            260..535
                     /locus_tag="VF061_03655"
     CDS             260..535
                     /locus_tag="VF061_03655"
                     /inference="COORDINATES: protein motif:HMM:NF014636.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HEX6668627.1"
                     /translation="MAVTFSLPTVLARLADGQSTIQASGTTLGDVVAQIADRFPRLAP
                     RLRDDSGGPYPFVTFYLNDEDIRFRSGFATPVREGDEITVVAAIAGG"
     gene            complement(539..1834)
                     /locus_tag="VF061_03660"
     CDS             complement(539..1834)
                     /locus_tag="VF061_03660"
                     /inference="COORDINATES: protein motif:HMM:NF024491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D-like domain-containing protein"
                     /protein_id="HEX6668628.1"
                     /translation="MSELFGLDVPWWAWALMITGAVATVGVIGALFLPDWPTPDYQLG
                     FDADAGSDDFLRLAAGFLNVPLLRGGTAELLRNGDRFYPAILEAIRGAQDTVNFEVYI
                     FESDETGREFIDAFKERARAGVEVRVLLDAFGSLKLKRAHRRELLDAGVKLEFFRPLT
                     LRNLVRVYRRTHRRAIVVDGRVGFTGGAAVSNKWRGDTRTPKEWRDSMTRVTGPLVAG
                     VQSAFAANWVYATGEVIAGPRFYPQGADGGPACGLSVVSSPTDAQQPIRMLIWLSFVN
                     ARRRLWIANSYFIPDVQLRMAARERARAGVDVRILVPGDHTDAKPVQYAGRAFYEELL
                     ADGVRIFEFQPSMMHAKTVVVDDAWVLVGSANMDERSMEINEENLLGVAEPEFTRAAA
                     EGLEEDFGRAREIQLDAWRRRPAYKRVLEKAAHILIEQY"
     gene            complement(1831..2766)
                     /locus_tag="VF061_03665"
     CDS             complement(1831..2766)
                     /locus_tag="VF061_03665"
                     /inference="COORDINATES: protein motif:HMM:NF015338.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HEX6668629.1"
                     /translation="MAALGGGLEARLAGWRKNVGEPVSLDLASAGEARRAAAATRLAV
                     MSWNVWMGRGRLLELVERLRDGTLGIPADVTPVLLIQEAFRQDHTIPARSNGFAAREL
                     VTRLRPRQDVVDVARTLGWNLRYAPSMRNGAERSDRGNAILTPLPLGGVQAIELPFAL
                     QRRVAVGATARVAGHTVRLLSAHLDPRGPVGYKWLGAAARGHQMEHLLAGLEDPTVVL
                     GADLNLGRGRAERAWRLLVEHGFAQGVPPVPPAWRHTYHSLPRLVIDYLLVRNRAGAI
                     RSSVVRRVDEDPGDRGPNVFGSDHHPLLGLVELAA"
     gene            2893..>3117
                     /locus_tag="VF061_03670"
     CDS             2893..>3117
                     /locus_tag="VF061_03670"
                     /inference="COORDINATES: protein motif:HMM:NF019814.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HEX6668630.1"
                     /translation="MKASDIRRGHVIMVDGQPCRVMDFQHRTPGNLRAFVQVRFRNLN
                     SGNTFDTRLSATEFVEDARLDTKELQVLYRD"
BASE COUNT          491 a         1126 c         1070 g          430 t
ORIGIN      
        1 tgggcggcgg gcgtgagcga cgccgacatc gtggccggca tccggctcct ggcggagacg
       61 accggcatct tcacggagac cgccggcggg gcgacggtct cgggtgcgct cgcgctggcc
      121 ggggccggcc ggctcgggcc cgacgacgag gtcgtcctct gcatcaccgg caacggactc
      181 aagaccgtgg aggcgctcca gggcgtgctg cccgaggccc ccgtcatcgc accgagactc
      241 aaggaactgg aggcattgta tggccgtgac ctttagcctg cccaccgtgc tcgccaggct
      301 ggccgacggc cagtccacca ttcaggcgag cggcaccacc ctgggcgatg tcgtcgccca
      361 gatcgcggac cggtttccgc ggctcgcgcc ccggctccgg gacgacagcg gcggccccta
      421 tcccttcgtc acgttctacc tgaacgacga ggacatccgg ttccgcagcg gcttcgcgac
      481 gccggtgcgg gaaggcgacg agatcacggt ggtagccgcg atcgccgggg ggtgaggatc
      541 aatactgctc gatgaggatg tgcgctgcct tttccagcac gcgcttgtag gcgggccggc
      601 ggcgccaggc gtcgagctgg atctcccggg cgcggccgaa gtcctcctcg agaccttccg
      661 ccgccgcacg ggtgaactcc ggctcggcca cgcccagcag gttctcctcg ttgatctcca
      721 tgctgcgctc gtccatgttg gccgagccca ccaggaccca ggcgtcgtcc accaccacgg
      781 tcttggcgtg catcatcgag ggctggaact cgaagatcct gaccccgtcc gccagcagct
      841 cctcgtagaa ggcacgtccc gcgtactgca cgggcttggc gtcggtgtgg tcgccgggca
      901 ccaggatgcg gacgtccaca cctgcgcggg cccgctcccg cgccgccatc cgcagctgga
      961 catcgggaat gaagtacgaa ttcgcgatcc agagccggcg ccgcgcgttg acgaagctga
     1021 gccagatgag catccggatc ggctgctggg catccgtcgg tgagctcacg accgacaatc
     1081 cgcacgccgg gccgccgtcc gcgccctgcg ggtagaaccg cggccccgcg atcacctcac
     1141 ccgtggcgta gacccaattg gcggcgaacg cggactggac gccggccacc agcggcccgg
     1201 tgacccgggt catgctgtcg cgccattcct tcggcgtccg cgtgtctccg cgccacttgt
     1261 tggacaccgc cgccccgccg gtgaacccga cccgcccgtc caccacgatc gcgcgccggt
     1321 gggtgcgccg atacacccgc accaggttcc ggagcgtgag ggggcggaag aactcgagct
     1381 tcaccccggc gtcgagcagc tcgcggcggt gcgcccgctt gagcttgagc gagccgaacg
     1441 cgtccagcag cacgcgcacc tccacacccg cgcgcgcgcg ctccttgaag gcatcgatga
     1501 actcccgccc ggtctcgtcc gattcgaaga tgtagacctc gaagttgacc gtgtcctgcg
     1561 cgccgcggat cgcctcgagg atcgcggggt agaaacggtc gccgttccgg agcagctcgg
     1621 ccgtgccgcc gcgcagcagt ggcacgttga ggaagccggc cgcgagccgg aggaagtcgt
     1681 cggagccggc atccgcgtcg aagccgagct ggtaatcggg cgtgggccag tcggggagga
     1741 agagcgcgcc gatcaccccg accgtcgcca ccgccccagt gatcatgagc gcccaggccc
     1801 accagggcac atcgaggccg aagagctcgc tcatgcggcc agctcgacca ggcccaggag
     1861 ggggtgatga tccgagccga agacattggg cccgcggtcg cccggatcct cgtccacccg
     1921 gcgcaccacc gacgagcgga tggcgccggc gcggttccgc accagcaggt agtcgatgac
     1981 gagccgcggc agcgaatggt aggtgtggcg ccaggcggga ggcaccggcg gcactccttg
     2041 ggcgaagccg tgctccacca gcagccgcca cgcgcgctcg gcgcgtcccc gtccgagatt
     2101 gagatcggcg cccagcacca cggtggggtc ctccaggccg gcgagcaggt gctccatctg
     2161 atggcctcgg gcggccgcgc cgagccactt gtagccgacc ggcccccggg gatcgaggtg
     2221 cgcgctcagc agacgcacgg tgtgtcccgc gaccctggcg gtggccccga ccgccacccg
     2281 ccgctggagc gcgaacggga gctcgatcgc ctgcaccccg cccagcggca gtggggtgag
     2341 aatcgcgttg ccccggtcgc tccgctcggc accgttccgc atcgagggag cgtaacgcag
     2401 gttccacccg agtgtgcggg cgacgtccac cacgtcctgt cgcggacgca gacgggtcac
     2461 cagctcccgc gcggcgaatc cgttcgaccg ggcggggatg gtgtggtcct gccggaatgc
     2521 ctcctgaatc agcagcacgg gcgtgacatc ggccgggatg cccaaggttc cgtcgcgaag
     2581 ccgctccacc agctccagga gccggccccg tcccatccag acgttccagc tcatcaccgc
     2641 aaggcgggtg gcggctgccg cgcgacgcgc ctccccggcg ctcgcgagat cgagcgagac
     2701 aggctcgccc acgttcttcc gccaaccagc caggcgggcc tcgagaccac caccgagcgc
     2761 tgccacgccc ggagaaccta gaccggccca tgagctggcg gcagtgactg cagtcacggg
     2821 tggcggtatc ttccaccggc tccggggcat cctgccctcg gcgcgaccga cgaccagagg
     2881 agcagcatac cgatgaaggc gagcgatatc cggcgcggac acgtgatcat ggtagacggc
     2941 cagccgtgcc gggtgatgga cttccagcac cggaccccgg ggaacctgcg ggcgttcgtc
     3001 caggtgcgtt tccgcaacct gaattccggc aacacgttcg ataccaggct gagcgccacg
     3061 gagttcgtgg aggacgcgcg gctcgacacc aaggagctgc aggtgctcta ccgcgac
//
LOCUS       DASUYN010000189         2207 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1163934, whole genome shotgun sequence.
ACCESSION   DASUYN010000189 DASUYN010000000
VERSION     DASUYN010000189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2207
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1163934"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            51..1697
                     /locus_tag="VF061_03675"
     CDS             51..1697
                     /locus_tag="VF061_03675"
                     /inference="COORDINATES: protein motif:HMM:NF013225.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HEX6668631.1"
                     /translation="MLTGTGAIGGREAVVVVLDHAFLGASIGPVAGEKILLAMESAAA
                     RRLPFIAICTAGGARTQEGLLGLIQAPKIAAAAARLHRAGVPVVSVLAHPATGAAWAA
                     LANQADIILAEPGARIGLGGRQPGGENAGTAEGLLARGMIDGIVDRTSLRDTLAILVA
                     LFADRGEYRPATPGDASFSATAFTAGEPIAARRRVAGWQEAGLARHPERPRARDYLAR
                     LVTDWIELHGDRTGDDDPAMIVGLGRIVGIPAAFIAGDRGQPAGAGAFRKAERVLRLA
                     GHLELPVIALVDTPGLDSGPGNDPAQTAAALAGVIGLTGLLPVPIVSVVIGEAAGAAG
                     VALGIGDHILMQEHAVYTVGGAEGTDRRAAEPLAASRTLTAAECRRLGVVDTIIPEPS
                     PAAHADPEAATRMLGAAVASALADLAGVGPRRLLNDRATKLRTLGQTTPEGREAARRE
                     VRELQELQRTLARSLGDLRERLEDHGLPRNLHLPQLPAPVRGRVHIDTSGLPTVEWAR
                     AELADRAVRLSAWRRHGEPPGEKPDLAPVTPGDERNEGSS"
     gene            1694..>2207
                     /locus_tag="VF061_03680"
     CDS             1694..>2207
                     /locus_tag="VF061_03680"
                     /inference="COORDINATES: protein motif:HMM:NF012993.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HEX6668632.1"
                     /translation="MTLPGVDSTPPPYRAAAIQFEPTLFDKTANLEALLRLTREAAAG
                     GAKLIVTPEMATTAYCWATREEVASDVEPVPGPTTQRFSEIAADHDCWVVVGLAEVDP
                     ETGIYYNSAVLIGPEGPVELYRKTHAYISEPKWAKDGDLGLPVFEIPIGRIAIMICQD
                     ACFPETTRVPA"
BASE COUNT          314 a          772 c          792 g          329 t
ORIGIN      
        1 ctcaagcggc ggagcggttc ggcggtcccg gtggtggcgt cagcgaggcg gtgctcaccg
       61 gcacgggcgc tattgggggg cgcgaggcgg tggtcgtcgt cctcgatcac gccttcctcg
      121 gtgccagcat cggtccggtc gccggcgaga agatcctcct cgccatggag tccgccgccg
      181 cccgccgtct tcccttcatc gccatctgca ccgccggtgg cgcgcgcacc caggaggggt
      241 tgctggggct gatccaggcg cccaagatcg ccgccgccgc ggcgcggctc caccgcgccg
      301 gggtgccggt cgtcagcgtg ctggcgcatc cggcgacggg cgcggcctgg gcggcactgg
      361 cgaaccaggc ggacatcatc ctggccgagc ctggagccag gatcggcctc ggtggccggc
      421 aaccgggtgg ggagaacgcc gggacggcgg aagggcttct ggcgcgaggc atgattgacg
      481 ggattgtcga ccgcacgagc ctgcgcgaca cactggcaat tctcgtcgcg ctcttcgccg
      541 accggggcga ataccggccg gcgactcctg gcgatgcttc gttctccgct accgctttca
      601 ccgccgggga accgatcgcg gcgcggcgcc gggttgccgg gtggcaggag gccgggcttg
      661 cccgtcatcc cgagcggccg cgcgcccgtg attacctcgc ccgtctggtc acggattgga
      721 tcgagctgca tggtgaccgt accggagatg acgatccggc gatgatcgtg gggctgggcc
      781 gcatcgtcgg catcccggcg gcgttcatcg ccggcgaccg gggtcaaccg gcgggagcgg
      841 gcgccttccg caaagcggag cgggtgctgc gcctggccgg gcacctcgag ctgccggtca
      901 tcgccttggt cgatacaccg gggctcgatt ccggacctgg caacgacccc gcgcagaccg
      961 ccgcggcgct ggctggggtg atcggactca cgggtctgct tccggtgccg atcgtgtcgg
     1021 tcgtcatcgg cgaggccgcc ggcgcggcgg gtgtggccct cggcatcggg gatcacatcc
     1081 tgatgcagga gcacgccgtc tacaccgttg gcggcgcgga gggcaccgat cgccgcgccg
     1141 ctgaaccact ggcggcctct cgcacactga cggctgccga atgccggcgt ctcggggttg
     1201 tcgacacgat catcccggag ccgagcccgg cggcccacgc cgatccggaa gccgccaccc
     1261 gcatgctcgg tgcggcggtc gcttcggcac tggccgatct ggcgggtgtc ggaccgcggc
     1321 gtctcctcaa tgaccgcgcg accaagctgc gcactctcgg tcagaccacg ccagagggcc
     1381 gagaggccgc tcggcgcgag gtccgcgagc tgcaggagct acagcgcacc ctggctcgct
     1441 cgctcggcga tttgcgcgag cgactcgagg atcatgggct gcccaggaat ctccacctgc
     1501 cgcagctgcc agccccagtg cggggtcggg tgcatatcga cacctcaggg ctgccaaccg
     1561 tcgagtgggc gcgcgcggag ctggccgacc gggcggtgcg actctccgcc tggcggcggc
     1621 atggcgagcc gcccggggag aagccggatc tggcgccggt cactcccgga gatgagcgaa
     1681 acgagggctc gtcatgaccc ttcccggtgt ggatagcacg ccgccgccct atcgagccgc
     1741 ggcaatccag tttgaaccga cgcttttcga caagaccgcg aacctggagg cactgttgcg
     1801 gctcaccagg gaggccgcgg ctgggggcgc gaagctgatc gtcacgccag agatggcgac
     1861 gaccgcctac tgctgggcca cccgcgagga ggttgccagc gacgtcgagc ccgtgcccgg
     1921 accgacgacg caacgcttct ccgagatcgc cgccgatcac gactgctggg tcgtggtcgg
     1981 tctggccgag gtcgatccgg aaaccggcat ctactacaac agcgcggtcc tcatcggccc
     2041 cgaaggaccc gttgagctgt accgcaagac ccacgcctac atctccgagc cgaagtgggc
     2101 caaggacggc gacctcggcc tgcctgtctt cgagataccg atcggccgca tcgcgatcat
     2161 gatctgccag gatgcctgct ttcccgagac gacccgcgtc ccggcgc
//
LOCUS       DASUYN010000190         9071 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1825576, whole genome shotgun sequence.
ACCESSION   DASUYN010000190 DASUYN010000000
VERSION     DASUYN010000190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9071
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1825576"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..671)
                     /locus_tag="VF061_03685"
     CDS             complement(<1..671)
                     /locus_tag="VF061_03685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668633.1"
                     /translation="MRNIPYLVLLAAILACNDQSEVTTEPADALAERGSGLRYRVVMQ
                     ASTLGGRVNVATSINSRGRLAGFSDLGTEPTRHAVLWGRGGNIDDLGTLGGLNSVVQW
                     PGQNDWGMVVGISETSDLDPNSEPWSCTAFFRDPTQPTGHVCRGFAYYDDRMHELPTL
                     GGTHGFATSANNRGQVVGWAETTVEDPTCNGDQVLQFRAVLWEPKKDRHRELPPLAGD
                     STSAAT"
     gene            836..1615
                     /locus_tag="VF061_03690"
     CDS             836..1615
                     /locus_tag="VF061_03690"
                     /inference="COORDINATES: protein motif:HMM:NF015272.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004833 - tryptophan 2,3-dioxygenase
                     activity [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0019441 - tryptophan catabolic process to
                     kynurenine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan 2,3-dioxygenase family protein"
                     /protein_id="HEX6668634.1"
                     /translation="MPTYGEYLRTEELLGLQRPLSEGPEHDEMLFIVIHQVYELWFKQ
                     VLHELEYLESLLDRNEGDRARHTLKRILTILKVMVAQLDILETMTPLEFLSFRDRLES
                     GSGFQSHQFRELEFALGLKDPRALERYPEGSEARRRLERRLHAGTLWDAFLRHLHTNG
                     VAVPRGDLQRDLAQSVAPSPELRPALVEVYRHQPALADLCERLVDLDEGLQEWRYRHV
                     KMVQRTIGTRRGTGGSTGAEYLMSTLNKPLFPDLWAIRTEL"
     gene            1615..2811
                     /locus_tag="VF061_03695"
     CDS             1615..2811
                     /locus_tag="VF061_03695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668635.1"
                     /translation="MDPASLHRSPNALAPHYARFRVSERLLLTGHSHQAWPDCGFEAQ
                     AEAWLDAARYVDDKWDHAFERAERVRDGFTRLLGDAGDGLALAPNTHELVVRLLSAVP
                     LRTRPRLVTTDGEFHTIRRQLDRLGEEGLEVVRIAEEPVETVAARLAAAVDARTALVL
                     VSAVFFDTGRIARGLGEVAASCRRHGTTLLVDVYHALNVVPVMLADDDLGDAFVVGGG
                     YKYCQLGEGNCFLRLPPGTELRPVVTGWFSEFTALTERHGNGRVAYGRGGDRFAGATY
                     DPTSHYRAAAVFDFFRERGLTPALLRDVSQHQIGILAETFDGLDLDPAVVTRDCSVPL
                     SEIGGFLALRSPRATALSRELHGREVMTDARGDVLRFGPAPYLSDRQLRDAIGLLGET
                     VRQSGR"
     gene            2808..3914
                     /locus_tag="VF061_03700"
     CDS             2808..3914
                     /locus_tag="VF061_03700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019704214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HEX6668636.1"
                     /translation="MIPIRVALLGFGYAGRVFHAPLIAATPGLSLTALGTRRSAAEAG
                     FPDAEAIPDMLAAARYPEADLVVIATPNESHAPLAEAALRAGKHVVVDKPFTVTLAEA
                     RALSALAGEDRRVLSVFQNRRWDSDFLGVRAAIAGGVLGDVAELRSEMSRYRPEVRDR
                     WRERAGPGSGLWYDLGPHLVDQALVLFGPPTGVAADLRIQRRGGSAVDWFHVVLGYDR
                     SRVILSASMLAAAPAPRFVVRGTRATLTRLSWDPQEEQLMGGVVPGSPAWGRDSEPFT
                     LHLGEPPEVRQIPAPPGDYTAYYAAVRDAIVAGGEPPVSPAQACCVMAILEAGARSSA
                     EGRVVAPDLTPAELLTWGHEFERKNRSAGPVADR"
     gene            3966..5057
                     /gene="ada"
                     /locus_tag="VF061_03705"
     CDS             3966..5057
                     /gene="ada"
                     /locus_tag="VF061_03705"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012320489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-binding transcriptional
                     regulator/O6-methylguanine-DNA methyltransferase Ada"
                     /protein_id="HEX6668637.1"
                     /translation="MILSPRTRAAAGAIESDPRWAAVVARRAAADGSFFYSVRTTGVY
                     CRPSCGARLPRPENVRFHATREEAEKAGFRPCKRCRPDRPALAERHAAMVTEACRLIE
                     TSSAAPALEELAARFGMSQFHFHRIFKSVTGLTPREYAAAHRGERVRRELGAAPSVTA
                     AIYESGYSSNGRFYGESERVLGMTPTEFRAGGANAEIRFAVGECSLGSILVARSGRGV
                     CAILLGDDPDALARELQDRFPRATLIGGDPGFEDLVARVVGLVEAPRVGLDLPLDVRG
                     TAFQQRVWRALREIPAGTTVSYREIARRIGSPASIRAVAHACAANPLAVAIPCHRVVR
                     SDGGLAGYRWGVERKRALLQREAAGATGS"
     gene            complement(5044..6915)
                     /locus_tag="VF061_03710"
     CDS             complement(5044..6915)
                     /locus_tag="VF061_03710"
                     /inference="COORDINATES: protein motif:HMM:TIGR00976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HEX6668638.1"
                     /translation="MSLYGAEAAGVPAVALAGGRGIDLAMPSPGSQVRWTIHGLAIHA
                     SLAGLAACASRPPSPATVVVDSAVPVPMRDGALLVASVWRPSSGARAPVLLVRTPYGR
                     GVDATGPDFIPQAVARGYAVVVQDVRGRYASEGDYEPYRHEGRDGYDTIEWAARQPWS
                     SGAVGTFGLSYPGAVQWLAAVERPPSLKAMVPAMTYATPESFWYSGGVWDGSWLDWTW
                     WNIAPDLRRRLGAPGPRTDEEVSAAWQRGGTQARRHRPMLTLPDFQGIAPWYYEWMRH
                     PPGDPWWDWATLEGRYDRVGAAVLNLSGWFDEPYGPLGAVTNYGGLVRARPPGASRSR
                     LILGPWTHGVDAVGKSASGDRDFGSAAAIDYTETVLRWMDRHLKGSDPGPEGPQVRVF
                     VMGANRWREAEAWPIPGTESDTVYLHSPADGTASGELRSSAVRAADGMTVIRSDPANP
                     VTDPHDGAYGPHDYRDLPGRPGVVVFETPAFTEAWELIGQVVAELEVSATVPDYDLWL
                     QLYDVAPDGTAWSLASPGTALLRASYRDGGPERRLIPEGEVVRLRIEGPLTANRFLAG
                     HRLRVALSGAFYPLFSVNPQTGAQEFESDGTRAGDIRVHHSAGRASMVILPRAPMTR"
     gene            6937..7398
                     /locus_tag="VF061_03715"
     CDS             6937..7398
                     /locus_tag="VF061_03715"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX6668639.1"
                     /translation="MNRAILLALAAVLPPALLPAQASPPGLPALTRQVFAAESSFAAT
                     MAARDSVAFARFIASDAIFFGEKNVLRGKAAVVNGWRRFFTGTAAPFSWRPEKVEVLD
                     AGTLALSTGPVHDPDGRQIGTFTSIWRREADGTWRVVFDKGCPVCNCEPDS"
     gene            7435..8022
                     /locus_tag="VF061_03720"
     CDS             7435..8022
                     /locus_tag="VF061_03720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEX6668640.1"
                     /translation="MTDEPISEPELEGILAFLRTAERLKSTPRSGWTTAGERESVAAH
                     TWRLLLMATVLADRFPGIDLARLLKICLIHDLGEALHGDVPAPLQSVGADKAARERED
                     LRAVLSPLPRRLREELLGLWDEYEAAETAEAQLAKGLDKLETILQHTQGLNPADFDYR
                     FNLTYGQAYTAAHPLLAAIRARLDAATEARARDLA"
     gene            8019..8720
                     /locus_tag="VF061_03725"
     CDS             8019..8720
                     /locus_tag="VF061_03725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668641.1"
                     /translation="MSRARLRAAAVHVYTASGVVLAFLATAEICSAEPDPRTVFILLA
                     LAVLVDATDGPLARRWEVKRWLPAIQGRTIDDIVDYLTYTFVPLLLVWRMGWVPEPAL
                     AWIAPALVASLFGFANTGIKDETGGFFLGFPSYWNVVAFYAGPLDRLYGPALNAALLL
                     LLSVATLLPLRFLYPNLTPRPWRTPVILGALLWLGAMLAMLGDYPRVPAWAVWLSLLY
                     PAFYVWLSLRLAARG"
     gene            complement(8736..>9071)
                     /locus_tag="VF061_03730"
     CDS             complement(8736..>9071)
                     /locus_tag="VF061_03730"
                     /inference="COORDINATES: protein motif:HMM:NF012308.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serpin family protein"
                     /protein_id="HEX6668642.1"
                     /translation="SLPRFRLEYGRKLLDDLAALGMGIAFSPAADFSRIADVAPDRLY
                     ITRVDQKTFVEVNEQGTEAAAATAVGVGRTSAPVAVEMRVDRPFLFAIRERLSGAVLF
                     LGVMHDLGE"
BASE COUNT         1216 a         3352 c         3207 g         1296 t
ORIGIN      
        1 gtcgcggcgg aggtagagtc tccggccagc ggcggcagct cccgatgacg gtccttcttc
       61 ggctcccaca ggaccgcgcg gaactgaagc acctggtccc cgttacaggt cggatcctcc
      121 accgtggtct cggcccagcc cactacctgg ccccggttgt tggcgctggt ggcgaagccg
      181 tgggtgcccc ccagcgtggg gagctcgtgc atccggtcgt cgtaataggc gaagccacgg
      241 cacacgtggc cggtgggctg ggtgggatcg cggaagaacg ccgtgcagct ccagggctcg
      301 ctgttcgggt cgaggtcact ggtttccgag attccgacga ccatgcccca gtcgttctgc
      361 cccggccact gcacgacgct gttcagcccg ccgagcgtgc cgagatcgtc gatgttgccg
      421 ccgcgacccc agagcaccgc gtgccgcgtc ggctcggtgc ccaggtcgga gaagccggcc
      481 agccgcccgc ggctgttgat gctggtggcg acgttgaccc tgccgcccag ggtcgaagcc
      541 tgcatcacga ctcggtagcg tagccccgag ccgcgctcgg cgagcgcgtc cgccggctcg
      601 gtggtgactt cggactggtc gttgcaggcg agaatggcgg cgagcaggac gaggtacggg
      661 atgttccgca ttgaaatact ccggtgatga gaaccagggc ggcgcgcgac ctcgcgcccc
      721 gcgatgctcc cccaccgtag tgctccgtac accggccggc gcgccggatt cggactccga
      781 atccgccggc gcgcccggtc ttgcgcgacc acggtcccgg ggccatcctg cccgcatgcc
      841 cacctacggc gaatacctcc gcaccgaaga gctcctggga ctgcagcgtc ctctctccga
      901 gggcccggag cacgacgaga tgctcttcat cgtcatccac caggtgtacg agctctggtt
      961 caagcaggta ttgcacgagc tggagtacct cgaatccctc ctcgaccgca acgagggcga
     1021 ccgcgcgcgc cacaccctca agcgcatcct caccatcctc aaggtgatgg tggcccagct
     1081 cgacatcctg gagacgatga cgccgctgga gttcctctcc ttccgcgacc ggctcgagtc
     1141 aggcagcggc ttccagtccc accagttccg ggagctggag ttcgccctcg gcctgaagga
     1201 ccctcgggcg ctggagcgct accccgaggg cagcgaggcg cggcgccggc tcgagcggcg
     1261 gctccacgcc ggcacgctgt gggacgcctt cctccggcac ctgcacacca acggtgtcgc
     1321 ggtcccgcgc ggcgacctgc agcgcgacct cgcccagagc gtggcgcctt cgcccgagct
     1381 ccggcccgca ctggtggagg tctaccgcca ccagcccgcg ctcgccgacc tgtgcgagcg
     1441 gctggtggat ctcgacgagg gcctccagga gtggcgctac cggcacgtga agatggtgca
     1501 gcgcaccatc ggcacgcggc gggggaccgg gggcagcacc ggcgcggagt accttatgtc
     1561 caccctcaac aagccgctct ttccggatct ctgggccatc cgcaccgagc tgtgatggat
     1621 cccgcgtccc tccatcgctc ccccaacgcg ctcgcgcccc attacgcccg cttccgcgtc
     1681 tccgagcgac tgctgctcac cggccattcc caccaggcat ggcccgactg cggcttcgag
     1741 gcgcaggcgg aggcatggct cgacgccgcg cgctacgtgg acgacaagtg ggaccatgcc
     1801 ttcgagcggg ccgagcgggt ccgcgacggc ttcacccggc tgctgggcga cgcgggtgac
     1861 ggcctcgcgc tcgcgcccaa cacccacgag ctggtcgtgc ggctcctgtc ggcggtgccg
     1921 ctccgtacca ggccgcggct ggtcacgacc gacggcgagt tccacaccat tcgccgccag
     1981 ctcgaccgcc tgggggagga agggctggag gtggtgcgga tcgccgagga gccggtggag
     2041 acggtcgccg cgcggctcgc cgcggcggtg gacgcccgca ccgccctggt gctggtgtcg
     2101 gcggtgttct tcgacaccgg ccgcatcgcg cgagggctcg gtgaggtggc ggcgagctgc
     2161 cgacgccatg ggaccaccct gctggtggac gtgtaccacg cgctcaacgt ggtgcccgtc
     2221 atgctggcgg acgacgatct cggcgacgcg ttcgtcgtcg gtgggggcta caagtactgc
     2281 cagctcggcg aaggcaactg cttcctgcgt ctgccgcccg gaacggagct ccggccggtc
     2341 gtgaccggct ggttcagcga gttcaccgca ctgacggagc ggcacggaaa cggacgcgtc
     2401 gcctacgggc gcggcggcga ccggttcgcc ggggcgacgt acgatcccac cagccattac
     2461 cgcgcggcgg ccgtgttcga cttcttccgc gagcgcgggc tcacccccgc gctgctgcgg
     2521 gacgtgagcc agcaccagat cggcatcctc gccgagacct tcgacgggct cgacctcgat
     2581 cccgccgtcg tgacccgcga ctgctcggtg ccgctgagcg agatcggcgg cttcctggcc
     2641 ctccgctcgc cccgcgccac ggcgctctcg cgggagctgc acggccgcga ggtgatgacc
     2701 gacgcccgcg gagacgtcct tcggttcggc ccggcgccgt acctgtcgga ccgccagttg
     2761 cgcgacgcca tcggcctgct gggcgagacc gtccggcaga gcggacgatg atcccgatcc
     2821 gcgtggcgct gctcggcttc ggctacgccg ggcgggtgtt ccacgcaccg ctcatcgccg
     2881 ccacgcccgg gctctcgctc accgcgctcg gcacccgccg ctccgccgcc gaggccggct
     2941 tccccgacgc cgaagccatc cccgacatgc tcgcggcggc acggtacccc gaggcggatc
     3001 tcgtcgtcat cgccacgccg aacgagagcc acgcgccgct cgccgaggcg gcgctgcggg
     3061 ctggcaagca cgtcgtggtg gacaagccct tcaccgtcac gctcgccgag gcgcgggcgc
     3121 tctcggcgct ggccggggag gaccgacggg tgctttcggt cttccagaac cggcgctggg
     3181 acagcgactt cctcggcgtc cgagccgcga tcgcgggagg ggtgctgggg gacgtggcgg
     3241 agttgaggtc cgagatgagc cgctaccgcc ccgaagtgcg cgaccgctgg cgggagcggg
     3301 caggcccggg ctcgggcctg tggtacgacc tggggccgca cctggtggac caggcgttgg
     3361 tcctcttcgg tccgccgacg ggggtcgcgg ccgacctccg gatccagcgc cgcggtggat
     3421 cggcggtgga ctggttccac gtcgtgctcg gctacgaccg cagccgcgtg atcctgtcgg
     3481 cgagtatgct tgccgccgct cccgcgccgc ggttcgtcgt ccgtggcacc cgggcaaccc
     3541 tcaccaggct gagctgggat ccgcaggagg agcagctgat gggcggagtg gtaccgggct
     3601 cgcccgcctg gggccgggac tcggagccgt tcacgctcca cctgggcgag ccgcccgagg
     3661 tgcggcagat ccccgccccg ccgggggatt acaccgccta ctatgcggcg gtgcgggatg
     3721 cgatcgtggc cggtggggag ccgcccgtct ccccggctca ggcctgctgc gtcatggcca
     3781 tcctggaggc gggggcgcgc tcatccgcgg aggggcgagt ggtggcgccc gaccttaccc
     3841 cggccgagct cctcacgtgg gggcacgagt tcgagcgcaa gaaccggagt gcgggcccgg
     3901 tggcggaccg gtagacttcc ctcgtgaagg acgacggcat gtcacgcagc cgaaagggaa
     3961 agcgaatgat cctgtcaccc cggacccggg ccgccgccgg cgcaatcgag agcgacccgc
     4021 gctgggcggc cgtggtggcc cgccgtgcgg cggccgacgg cagcttcttc tactcggtgc
     4081 gaaccaccgg cgtgtactgt cgcccctcct gcggggcgcg gctgccccgt ccggagaacg
     4141 tgcggttcca cgcgacccgg gaggaggccg agaaggccgg gttccgcccc tgcaagcggt
     4201 gccgcccgga ccggccggcg ctggcggagc ggcacgcggc gatggtgacg gaagcctgtc
     4261 gcctgatcga gacctcgtcc gcggcgccgg cactcgagga gctggccgcg cgcttcggga
     4321 tgagccagtt tcactttcac cggatcttca agtcggttac cggcttgacc ccgagggagt
     4381 acgcggcggc ccaccgcggc gagcgggtgc ggagagagct gggggcggca ccgagcgtga
     4441 ccgcggcgat ctacgagtcg ggctacagct cgaacggccg gttctacggt gagtcggagc
     4501 gggtgctcgg gatgaccccg accgagttcc gcgccggcgg cgcgaacgcg gagatccgct
     4561 tcgcggtcgg tgagtgctcc ctgggctcga tcctggtcgc ccggagcggg cgcggggtct
     4621 gcgctatcct cctgggcgac gaccccgacg cgctggcccg agagctccag gaccgctttc
     4681 cccgcgccac gctcatcggc ggcgacccgg ggttcgagga cctggtggcc agggtggtcg
     4741 gactggtgga ggccccgcgc gtcgggctcg acctgccgct ggatgtgcgg ggcaccgcgt
     4801 tccagcagcg ggtctggcgc gcgctgcggg agataccggc gggaaccacg gtgagctacc
     4861 gcgagatcgc gcggcggatc ggctcccccg cctcgatccg ggcggtggcc cacgcctgcg
     4921 cggcgaaccc gctcgcggtc gccatcccct gtcaccgcgt ggtccggagc gacggcggcc
     4981 tcgcgggcta ccgctggggc gtggagcgga agcgggccct gctccagcgc gaggccgccg
     5041 gggctaccgg gtcataggag ccctgggcag gatcaccatc gaggcgcgcc cggccgagtg
     5101 atggacccgg atgtcgcccg cccgagtgcc gtcgctctcg aactcctggg ccccggtctg
     5161 cgggtttacc gagaacagcg gatagaacgc gcccgagagc gccacgcgga gacggtgccc
     5221 ggcgagaaag cggttggcgg tgagcgggcc ctcgatccgg aggcggacga cctcgccctc
     5281 gggaatcagg cggcgctccg gaccgccgtc gcgatagctc gcccgcagta gcgcggtgcc
     5341 ggggctcgcc aggctccagg ccgtgccgtc gggggccacg tcgtagagct ggagccagag
     5401 gtcgtagtcc ggcaccgtgg cgctcacctc cagctcggcg acgacctggc cgatcagctc
     5461 ccaggcctcc gtgaaggccg gcgtctcgaa cacgaccaca cccggccggc cgggcaggtc
     5521 tcggtagtcg tgcgggccgt acgcgccgtc atgtggatcg gtgaccggat tcgccgggtc
     5581 ggaccggatc acggtcatgc cgtctgcagc gcggacggcg ctcgagcgta gctcgccgga
     5641 tgcggtgcca tcggccggtg agtgcaggta cacggtgtcg gactcggtcc ccggaatcgg
     5701 ccaggcctcc gcctcccgcc accggttcgc tcccatgacg aagacccgca cctgggggcc
     5761 ctccggcccc ggatccgatc ccttcaggtg gcgatccatc cagcgcagca ccgtctcggt
     5821 gtagtcgatc gcggccgcgg aaccgaagtc gcggtcgccc gacgcggact ttcccacggc
     5881 gtcgacgccg tgagtccagg ggccgaggat cagccggctc ctcgaggcgc ccggcgggcg
     5941 ggcgcgcacc aggccgccgt agttggtgac cgcgcccagc gggccgtagg gctcatcgaa
     6001 ccacccggac aggttgagca ccgcggcgcc caccctgtcg tagcgtccct ccagcgtggc
     6061 ccagtcccac cagggatccc ccggcgggtg gcgcatccac tcgtagtacc acggcgcgat
     6121 gccctggaaa tccggcagcg tcagcatcgg ccggtggcgc cgggcctggg tgcccccgcg
     6181 ctgccaggcg gccgacacct cctcgtccgt gcgcggtccc ggcgcgccca gccggcgacg
     6241 caggtcggga gcgatgttcc accaggtcca gtccagccac gagccgtccc acacaccgcc
     6301 ggagtaccag aagctctccg gggtggcgta ggtcatcgcc ggcaccatcg ccttcagtga
     6361 cggcgggcgc tccaccgcgg cgagccactg caccgccccc ggataggaca ggccgaaggt
     6421 gcccaccgcg ccgctcgacc acggctgccg cgcggcccac tcgatggtgt cgtagccgtc
     6481 gcgtccctcg tggcggtacg gctcgtagtc gccctcggag gcgtagcggc cgcgcacgtc
     6541 ctgcaccacc acggcgtacc cgcgagccac ggcctgcgga atgaagtccg ggcccgtcgc
     6601 atccaccccc cggccgtacg gcgtccgcac gagcagtacc ggcgctcgcg cgcccgagga
     6661 cgggcgccac acgctggcca ccagcaacgc gccgtcccgc atcggcaccg gcaccgcgga
     6721 atccacgacc accgtggccg gcgaaggagg acgcgaggcg caggccgcca gcccggcgag
     6781 cgaggcatgg atcgcgagcc cgtgaatggt ccagcgcacc tgggatcccg gcgagggcat
     6841 ggccaagtct atgccccggc cgccggcgag cgccaccgcg ggaaccccgg cggcttccgc
     6901 cccgtagaga ctcacacccc ttcaggagcc gactcgatga accgggcgat cctcctcgcg
     6961 ctcgccgccg tcctgccgcc ggccctgctc ccggcccagg cttcgcctcc cgggcttccg
     7021 gccctcaccc ggcaggtgtt cgccgccgag agcagcttcg cggccacgat ggcggcgcgc
     7081 gactcggtcg ccttcgcccg cttcatcgcg tccgacgcga tcttcttcgg tgagaagaac
     7141 gtgctgcggg gcaaggcggc ggtggtgaac ggctggcggc ggttcttcac cgggaccgcc
     7201 gcccccttct cctggcggcc ggagaaggtc gaggtgctcg acgccggcac cctcgccctg
     7261 agcaccggcc cggttcacga ccccgacgga cgccagatcg gcaccttcac ctcgatctgg
     7321 cgccgcgagg ccgacggcac ctggagggtg gtgttcgaca aggggtgccc ggtgtgcaac
     7381 tgcgagccgg actcctgatc tcgcgcgggc acggcctgcg gctacctttc ccgcgtgacc
     7441 gacgagccga tatccgaacc cgagctcgag gggatcctcg cgttcctccg gaccgcggag
     7501 cgcctcaaga gcaccccgcg cagcgggtgg accaccgcgg gcgagcggga gagcgtggcg
     7561 gcccacacct ggcgcctctt gctcatggcg acggtgctgg ccgaccgctt tcccggcatc
     7621 gacctggccc gcctgctcaa gatctgcctc atccacgacc tgggtgaggc gctgcacggc
     7681 gacgttcccg cgccccttca gtccgtcggc gccgacaagg ccgcgcgcga gcgcgaggat
     7741 ctccgcgccg tgctgagtcc cctgccccgg cgcctccgcg aagagctcct ggggttgtgg
     7801 gacgagtacg aagccgcgga gacggccgag gcgcagctgg ccaagggcct cgacaagctg
     7861 gagaccatcc tccagcacac ccaggggctc aacccggccg atttcgacta ccgcttcaat
     7921 ctcacctacg gccaggccta caccgccgcg caccccctgc tcgccgcgat ccgcgcgcgc
     7981 ctggacgcag ccaccgaggc gcgagcccgc gacctcgctt gagccgggcg cggctccggg
     8041 cggcggccgt tcatgtctac accgcctccg gcgtggtcct cgcgttcctc gccaccgccg
     8101 agatctgctc ggcggagccc gatccgcgca cggtcttcat cctgctcgcg ctcgcggtcc
     8161 tggtggacgc gacggacggc cccctcgcgc gccgctggga ggtgaagcgg tggctgccgg
     8221 cgatacaggg ccgcacgatc gacgacatcg tggactatct cacctacacc ttcgtgccgc
     8281 tgctgctggt ctggcggatg ggctgggtgc cggagccggc gctcgcctgg atcgcgccgg
     8341 cgctggtcgc gtcgctcttc ggcttcgcca acaccgggat caaggacgag accgggggct
     8401 tcttcctggg ctttccgtcc tactggaacg tggtggcttt ctacgcgggg ccgctggacc
     8461 ggctctatgg ccccgcgctc aacgccgcgc tgctgctgct gctgtcggtc gcgaccctgc
     8521 tgccgctccg cttcctctac cccaacctga cgccccggcc ctggcgcacg ccggtcatcc
     8581 tgggcgcgct gctctggctg ggggcgatgc tcgccatgct gggcgactac ccccgcgtgc
     8641 cggcgtgggc ggtgtggctc tcgctgctgt atcccgcctt ctacgtctgg ctgtcgctcc
     8701 ggctcgcggc gcggggctga cgccggggac cgcggctact cgccgaggtc gtgcatcaca
     8761 ccgaggaaga gcacggcgcc cgagagccgc tcccggatgg cgaagaggaa gggccggtcc
     8821 acccgcatct ccaccgcaac cggggccgag gtgcggccca cgccgaccgc cgtggccgcg
     8881 gcagcctcgg tgccctgctc gttcacctcg acgaacgtct tctggtccac ccgggtgata
     8941 tagagccggt cgggcgcgac gtcggcgatt ctggagaagt cggccgccgg cgagaacgcg
     9001 atacccatcc ccagcgccgc gagatcgtcc agcagcttgc gcccgtactc caaccggaag
     9061 cgcggcaggg a
//
LOCUS       DASUYN010000191         2123 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1605360, whole genome shotgun sequence.
ACCESSION   DASUYN010000191 DASUYN010000000
VERSION     DASUYN010000191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2123
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1605360"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2000
                     /locus_tag="VF061_03735"
     CDS             <1..2000
                     /locus_tag="VF061_03735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668643.1"
                     /translation="AMSRIRTAPAWPGALLLLAIAGGAEAQYPLTRDRSTSTVGTRFG
                     DTTSTAGPAPAPATGAVRELVCRGAEGLQVATVANPSPRNSRQVAVSLSYRRNPRPAG
                     LAYEQLEPGACSWNITGDPTLPAEPGIVHFDLEPQGAEYIPDPASLTQWLNNPRHYWT
                     FYVDDLTNVSISHGSYGARFQAPAGDKPTATRPAAQRRERLRCRGGGAATFTQGKRIG
                     PNLFAVTLSYNAASTAAGPIGKGLQPGTCAWADRTDAPAEPGRIEFTTARNAQREQEK
                     SGAPVDSSATAAERWPDLRTIPAYMTDPGHYWTFNVSLTNPDSALRHGAWIPTAPEAP
                     DPPSPGPVATTPSGDSPYTSTSPSGARTTVSLPGGGGGGSTIEERYTPGAGNATVTDP
                     RIVFDIRNVQVRTGLDGASISFEAAPNLVPVVSVSTTAPEGAEGSQRFSGSSTRLTVS
                     GTPTGGTRWRYSAASGTPLARGTRYWFIAEAPEGPNSRYNQVTGEFRTLAQRVTVTVS
                     DIQVVSDGDAESDGDLWFTVRTCPDRVFQESDLIGDFKNRVQWSEGRHTLNREVTSAP
                     PSAPDKLRVLIVGIEDDYDVASGFGSRDPFQVWFSCEGSGNLEPKKTAKAEWNAVIMD
                     LDLSRYPGTKATEQFVRRSQPLQNGSTLMFEVRGYVTVTRE"
BASE COUNT          335 a          774 c          732 g          282 t
ORIGIN      
        1 tcgcgatgtc tcgaatccgc acggcaccgg cgtggcccgg agcgctcctg ctgctggcga
       61 tcgcgggcgg cgccgaggcg cagtatcccc tcacgcggga ccgcagcacc agcacggtgg
      121 gcacgcgctt cggcgatacc acgtccaccg caggccccgc ccccgcccct gccaccggcg
      181 cggtgcgcga gctggtctgc cggggagccg aaggcctcca ggtcgccacc gtggcgaacc
      241 cgagcccgcg caactccagg caggtggcgg tgtcgctctc ctaccggcgg aacccgaggc
      301 cggcgggctt ggcctacgag cagctcgagc caggggcctg cagctggaac atcacgggcg
      361 atcccaccct cccggccgag ccggggatcg tgcacttcga cctggagccg cagggcgcgg
      421 agtacatccc cgacccggcc tcgctgacgc agtggctgaa caatccccgg cactactgga
      481 ccttctacgt cgacgacctg accaacgtgt ccatcagcca cgggtcgtac ggcgcgaggt
      541 tccaggcgcc ggcgggcgac aagccgaccg ctacccggcc cgcggcgcag cgccgcgagc
      601 ggctccgctg ccgggggggc ggcgcggcga ccttcaccca gggcaagcgc atcggcccca
      661 acctcttcgc ggtgacgctc agctacaacg cggcttccac cgcggccgga ccgatcggca
      721 agggactgca gccgggcacc tgcgcctggg ccgaccgcac cgatgctccc gcggagccgg
      781 gccggatcga gttcaccacc gcgcgcaacg cgcagcgcga gcaggagaag agcggcgccc
      841 cggtggacag ctcggcgaca gcggccgagc gctggcccga cctgcggacc atcccggcct
      901 acatgacgga cccggggcac tactggacgt tcaatgtcag cctgacgaat cccgactccg
      961 cgctgcgcca cggggcctgg attccgaccg cgcccgaggc gccggatcct ccctcgcccg
     1021 ggccggtggc gaccacgccg tcaggcgaca gcccgtacac ctcgacttca ccttcggggg
     1081 cgcgcaccac ggtgagcctt ccgggcgggg gcgggggcgg gagcaccatc gaggagcgct
     1141 acactccagg tgccggcaac gccaccgtga ccgatccgcg catcgtcttc gacatccgga
     1201 acgtccaggt ccggaccggg ctcgacggcg ccagcatcag cttcgaggcc gcaccgaacc
     1261 tcgtgcccgt ggtctccgtc agcacgaccg ctcccgaggg cgcggagggc agccagcgct
     1321 tcagcgggtc ttcgacccgc ctgaccgtgt cgggcacacc gaccggtggc acccgctggc
     1381 gctactcggc ggccagcggc accccgctcg cccgcggcac gcgctactgg ttcatcgccg
     1441 aggcgcccga aggccccaac tcgcggtaca accaggtcac cggtgagttc cgcaccttgg
     1501 cgcagcgcgt aaccgtcacc gtcagcgata tccaggtcgt gagcgacggc gacgcggaat
     1561 cggacgggga tctctggttc acggtccgga cctgtcccga tcgagtgttc caggagtcgg
     1621 acctcatcgg cgacttcaag aaccgggtgc agtggtcgga ggggcgtcac accctgaacc
     1681 gcgaggtcac gagcgcgccg ccctccgctc ccgacaagct tcgggtgctg atcgtcggga
     1741 tcgaggacga ctacgatgtt gcctcggggt ttgggtcacg cgacccgttc caggtctggt
     1801 tctcctgcga ggggagcggg aatctcgagc cgaaaaagac ggcgaaggcc gagtggaacg
     1861 ccgtcatcat ggatctggac ctgtcgcggt acccgggcac caaggccacc gagcagttcg
     1921 tccggcgctc gcagccgctc cagaatggaa gcaccctgat gttcgaggtg cgcggatacg
     1981 tgacggtcac tcgggagtag gtcgcccctt gtcaccctga gcgcagcgtg ggttgggatg
     2041 gtcgagggag gccgctgagc gcgcttcccg gaggaagcga tccttccagg tgggatccag
     2101 ccggtgctcc ggatgcggga gct
//
LOCUS       DASUYN010000192         3511 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1384898, whole genome shotgun sequence.
ACCESSION   DASUYN010000192 DASUYN010000000
VERSION     DASUYN010000192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3511
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1384898"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..73
                     /locus_tag="VF061_03740"
     tRNA            1..73
                     /locus_tag="VF061_03740"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:34..36,aa:Glu,seq:ttc)
     gene            143..901
                     /locus_tag="VF061_03745"
     CDS             143..901
                     /locus_tag="VF061_03745"
                     /EC_number="2.4.99.-"
                     /inference="COORDINATES: protein motif:HMM:NF013915.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase family
                     protein"
                     /protein_id="HEX6668644.1"
                     /translation="MIPEIEIGPLTLQTFGLCFAAAFLAAGAVVGVRLKELGKPVDWA
                     YEMGFSALAGGLIGARLDWLIQNWDDASDDIFGNILSGSGLVWFGGLVGGALGVILWA
                     RWRGYLSLGLLDLAAPALALGYAVGRIGCQLSGDGDYGKPWDGPWAMSYPDGTVPTTE
                     EVHPTPVYETLAMGIVALVLWRLRNRLTGGLLFALYLLLAGLERFLVEFIRRNEDVAL
                     GLTQAQLISVVMAIAGAVWLAYGLRRPPAAPATA"
     gene            complement(930..1679)
                     /locus_tag="VF061_03750"
     CDS             complement(930..1679)
                     /locus_tag="VF061_03750"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX6668645.1"
                     /translation="MDLGIEGKVALVMGASKGIGMGIAEALGREGARVALSARSEDAL
                     REVAKDIGESAVLPADTGDLDGMKALPGRVAEELGPVEILVTNTGGPPPGGALDHPRE
                     AWEEAYRSLVLAPQTLTDAVLPGMRERGWGRIVNVASSSVREPIPGLALSNAHRMAAI
                     GLFKTLADEVAKDGVTVNSVATGLFATERLATLHGSMADAERAAEEQVPAGRLGTPEE
                     YGDLVAFICSERAGYLTGTVIPLDGGRLRSV"
     gene            complement(1679..2008)
                     /locus_tag="VF061_03755"
     CDS             complement(1679..2008)
                     /locus_tag="VF061_03755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668646.1"
                     /translation="MLWRSGLAQLLAVIAVSLVLAALLPSSFFEDWGWLSGPAAWLAC
                     SGFTARVVGLPAGPVLLGALVAGIPSGIAVLAGVHWLGVALAVAVFALWCGTLAARHT
                     GVAGGGR"
     gene            complement(2082..3254)
                     /locus_tag="VF061_03760"
     CDS             complement(2082..3254)
                     /locus_tag="VF061_03760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668647.1"
                     /translation="MPFALDAIRKLGERGHEVHACDSYAAAPGSHSKYLAGHFTTASA
                     TDDPEAFVGDVERYAADNEIEVVIPMFEEIFYLAAQHERLSEVTRLFAPPFRTLAQVH
                     DKGTFQELCDRLGIRTPQTVVAHDPDELKVAIGRFPKYFGRAAFSRGGVGLMTNTGPL
                     AGHLKPEEVHPTESNPWLVQEFVDGPMRCTYSCIHGGEVATHMSYRAPRQWEHSTGIQ
                     FLSVDPSDTLPTVEGLASDLEWDGQMSLDFVDAEQGLMMIECNPRPTDGVLLMTAEEL
                     ERGLLAPTIETLQIEPGREEQLDFAVLGQVFKEPLKEAPGSIHDLAAVKGTDSGWHDE
                     LPQLYSFLAFAHHERMSLEERKGLFEAMSDGITWDGQPIPGLPPDDSTYLAKLTGD"
     gene            3303..3375
                     /locus_tag="VF061_03765"
     tRNA            3303..3375
                     /locus_tag="VF061_03765"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3336..3338,aa:Val,seq:tac)
BASE COUNT          476 a         1415 c         1091 g          529 t
ORIGIN      
        1 ggccccgtgg tctagcggta aagattccgg cttttcaagc cgtgagacgc cggttcgagt
       61 ccggtcgggg ctattgctgt ctgttccgat tgcggcccgg tcttcggacc cgcttagccg
      121 cctgagctag cctctcccgc ccgtgatccc cgagatcgag atcgggccgc tcaccctcca
      181 gaccttcggg ctctgcttcg cggcggcgtt cctggccgcc ggcgcggtcg tcggcgtccg
      241 cctgaaggag ctgggcaagc cggtggactg ggcctacgag atggggttct cggccctcgc
      301 cggcggactg atcggggccc gcctggactg gctgatccag aactgggacg acgcctccga
      361 cgacatattc ggaaacatcc tctcgggctc cgggctggtc tggttcggtg gcctggtcgg
      421 cggcgccctc ggcgtgatcc tctgggcgcg ctggcgcggc tacctcagcc tcggcctcct
      481 ggacctcgcc gcccccgccc tcgccctggg ctacgccgtg ggccgcatcg gctgccagct
      541 ctccggcgac ggcgactacg gcaagccctg ggacggcccc tgggccatgt cctaccccga
      601 cggcaccgtc cccaccaccg aggaggtgca cccgaccccg gtctacgaga ccctcgcaat
      661 gggcatcgtc gccctggtcc tctggcggct gcgcaaccgc ctgaccggcg gcctgctgtt
      721 cgcgctctac ctgctgctgg cggggctgga gcgcttcctc gtcgagttca tccgccgcaa
      781 cgaggacgtc gccctgggcc tgacacaggc ccagctgatc agcgtcgtga tggcgatcgc
      841 cggcgccgtc tggcttgcat acggcctgcg gcgcccgccg gcggccccag ccacggcctg
      901 atcccgggcg ccgccgccgg gccgcagcct cagaccgagc gcagccgccc gccgtccagc
      961 gggatcacgg tcccggtcag gtacccggcc cgctccgagc agatgaacgc gaccaggtcc
     1021 ccgtactcct ccggggtccc caaccgcccc gccggcacct gctcctccgc cgcccgctcc
     1081 gcgtccgcca tcgacccgtg cagtgtcgcc agccgctcgg tcgcgaacag gcccgtcgcc
     1141 accgagttca ccgtgacgcc gtccttcgcc acctcgtcgg cgagcgtctt gaacagcccg
     1201 atcgccgcca tcctgtgcgc attcgagaga gccaggcccg gtatcggctc ccgcaccgag
     1261 ctggaggcca cgttgacgat tcggccccat cccctctccc gcatcccggg cagcaccgcg
     1321 tcggtcagcg tctgcggcgc cagcaccagc gagcggtagg cctcctccca cgcctcgcgg
     1381 ggatggtcga gcgctccgcc cggcggcggc cccccggtgt tcgtgaccag gatctccacg
     1441 ggccccagct cctcggccac gcgtcccggc agcgccttca tcccgtccag gtccccggtg
     1501 tcggctggca gcacggctga ctccccgatg tccttcgcca cttcgcggag cgcgtcctcc
     1561 gaccgggccg agagggcgac acgagcaccc tcccgtccca gggcctcggc gatccccatg
     1621 ccgatcccct tgctcgcccc catcaccagc gcgaccttcc cttcgatccc caggtccatc
     1681 agcgcccacc tccggcgacg ccggtgtggc gcgcggcgag cgttccgcac cagagcgcga
     1741 acacggcgac ggccagcgcc acccccagcc agtgcacccc cgccagcacc gcgatgccgc
     1801 tcgggatccc cgccaccaac gcgcccagga gtaccggacc agcgggcagc cccaccaccc
     1861 gcgccgtgaa ccccgagcac gccaaccacg ccgccggacc gctcagccat ccccagtcct
     1921 cgaagaacga gctcggcagc agcgccgcca gcaccaggga caccgcgatt acggcgagca
     1981 gctgcgccag cccggaccgc cacagcacac tccggtcgag ccccggcccg cgccgggcgg
     2041 cggagccgtg ccgtgctctc gaggcggtca gcccctccaa ctcagtcccc cgtcagcttc
     2101 gccaggtacg tggagtcgtc cggcggcagg cccggaatcg gctgtccgtc ccacgtgatc
     2161 ccgtccgaca tcgcctcgaa cagccccttc cgctcctcca ggctcatccg ctcgtgatgc
     2221 gcgaacgcca ggaacgagta cagctgcggc agctcgtcgt gccacccgct gtcggtcccc
     2281 ttcaccgcgg ccaggtcgtg gatcgagccg ggcgcctcct tgagcggctc cttgaagacc
     2341 tgccccagga ccgcgaagtc aagctgctcc tcacgccccg gctcgatctg gagcgtctcg
     2401 atcgtcggcg cgagcagccc cctctccaac tcctcggcgg tcatcagcag caccccgtcg
     2461 gtcggccgcg ggttgcactc gatcatcatc agcccctgct ccgcgtcgac gaagtcgagc
     2521 gacatctggc cgtcccactc caagtcgctc gccagcccct cgaccgtcgg cagcgtgtcc
     2581 gacgggtcca ccgacaggaa ctggattcca gtcgaatgct cccactgccg cggcgcgcgg
     2641 taggacatgt gcgtcgccac ctctccgcca tggatgcagg agtaggtgca gcgcatcggc
     2701 ccatcgacga actcctgcac cagccacgga ttggactcgg tcgggtggac ctcctcgggc
     2761 ttcaggtggc cggccagcgg cccggtgttg gtcatcagcc cgactccgcc gcgcgagaac
     2821 gccgcccgcc cgaagtactt ggggaagcgc ccgatcgcca ccttcagctc gtccggatcg
     2881 tgcgcgacga cggtctgcgg cgtccggatc ccgagccggt cacagagctc ctgaaacgtc
     2941 cccttgtcgt gcacctgcgc gagcgtccgg aacggcggcg cgaacagccg cgtcacttcc
     3001 gagagccgct cgtgctgcgc ggccaggtag aagatctcct cgaacatcgg gatgaccacc
     3061 tcgatctcgt tgtcggcggc gtaccgctcc acgtccccga cgaacgcctc ggggtcgtcg
     3121 gtcgccgacg cggtggtgaa gtgcccggcc aggtacttcg agtggctccc cggcgccgcc
     3181 gcgtagctgt cgcacgcgtg cacctcgtgc ccccgctcgc cgagcttccg aatggcgtcc
     3241 agcgcgaagg gcatgcgcga gctcgtgatc aggatccgca cgaggcctac cctacgcatc
     3301 ccgggcggtt agctcagttg ggagagcgct tcgcttacac cgaagaggtc actggttcga
     3361 gcccagtacc gcccatcccc cgcgcgcacg gcgctcagga cggcttcggg tcctcgccct
     3421 cggtgtgctg gggcgtcagc gcgcccggac cgctcccccg cccgcgcagc agctcctcct
     3481 ccagctccgc gcccgcagct tccgccgttc a
//
LOCUS       DASUYN010000193        10387 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_945457, whole genome shotgun sequence.
ACCESSION   DASUYN010000193 DASUYN010000000
VERSION     DASUYN010000193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10387)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10387)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10387
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_945457"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2032)
                     /locus_tag="VF061_03770"
     CDS             complement(<1..2032)
                     /locus_tag="VF061_03770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012874565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_except=(pos:complement(1442..1444),aa:Sec)
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEX6668648.1"
                     /translation="MSLSRRQFLRQSGLTTAGGALGGLVALGLDPDRARAATVPLEWK
                     IERTRAVPSVCPYCAVGCGLLLHVRDGRLINAEGNPESPISRGTLCPKGAASFQLTVN
                     PNRPTRALYRKPGGTAWEPIELERAMDMVADRVKQTRDATFRRTGTINGREVTLNHML
                     GVGSLGGATMDNEWNYVQAKMFRGLGGVFIENQARIUHSATVPGLGTSFGRGGATTAQ
                     QDLQNSDAIVIMGSNFAECHPVGFRWAMKARERGAKLIHVDPRFTRTSAMCDLHVPIR
                     AGTDIAFLGGVVNYIIQNERWFKEYVLHYTNASTIISETFRDTEDLDGLFSGFDPKTR
                     SYDTRLWAYDGTIPGQPEMDKSANQPHAKEGNPGVDYRRNPPRTDPTLQHPRCVFQIL
                     KRHYARYTPEMVSRICGCSEEHFLEVAKTLCDNSGRERTAAFAYAVGWTQHTVGVQYI
                     RTASILQALLGNMGRPGGGILALRGHATIQGSTDIATLYNLLPGYLTAPSAQVARHDT
                     LEGWLQNEMPTTGWWANGRKYMVSFLRAWYGDAATPENEWGYQYLPKNVGDHSHLPMF
                     VAMHEGTLKGFMALGQNPAVGGQNAVYQRAGLARLEWLVVKDLFRTETAEFWMAPDVE
                     DPSAIQTEVFFFPSASVPEMDGSFTNTQRLVQWHEKAVDSPGDCRSDLWFTHH"
     gene            2232..2678
                     /locus_tag="VF061_03775"
     CDS             2232..2678
                     /locus_tag="VF061_03775"
                     /inference="COORDINATES: protein motif:HMM:NF024297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX6668649.1"
                     /translation="MIARYGLLLAALAVPAAARAQTAADSSAIRAVALDYAEGWYEGN
                     AERMSRAVHPELVKRIVVSDSATNRSVIQNMGATALVNGTRRGWGKETPADRRQKDVT
                     ILDIFGNAASVKAVMADWIDYLQVAKVDGRWVIVNVLWERKPGSKG"
     gene            2678..4054
                     /locus_tag="VF061_03780"
     CDS             2678..4054
                     /locus_tag="VF061_03780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668650.1"
                     /translation="MRLRPAALGGLATLLTAAAASPSDPPSRRSQDPPRSAAWLSLLP
                     DGEAKRKFILDCTGCHQFDQTIARPGGEPRTEAQWVEAVTRMLGYAGATTSFPVIAAD
                     RDAGATAAWLVRSLRGADVADLPVAASRPADVREYLMPVAQDLPHDLVVEPGGDVVIT
                     GMFTHRLYRLQQETGALSEIEIRGVPSANPRAIDRDAEGRTWVVLGQPTRLAMVAADT
                     AWRSWDVGMYPHSLAVAPDGRVWFNGHFTREPELIGYVDPERDTVVTHRVPPHPTLAK
                     GPGGPIPYEIRAAPDGRIWLGELQGNRLVAFTPGSGKFRSYTMPTPHSGPRRFDVDAK
                     GVLWIPAYSANLLVRLDPATGKFTEIRLPVKDALPYVARVDPRDGAIWIGTGAADALL
                     RYDPRSRLFETFPLPSRGALVRHLAVDPESGAVWLAYGASPGIPARVARVVVQEKGRE
                     RWNVKSEK"
     gene            complement(4152..5720)
                     /locus_tag="VF061_03785"
     CDS             complement(4152..5720)
                     /locus_tag="VF061_03785"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HEX6668651.1"
                     /translation="MTSRGSLRRFPILGSALAFLTGLMLAGVLNIPGFTEAQQQDSRY
                     AAETTGTATPPPAAVANLQNLSEAFASVAEAVKPSVVFIKSGRRNEPSERMHPQLPPG
                     FEQFMPRLPQQPEFQEAAGSGFVVSRDGYILTNAHVVDGSDEVIVRLLDRREFKAKVV
                     GTDDATDLAVVKIEANNLTPAPLGDSDAARVGEWVLAVGNPLGENLTFTVTSGIISAK
                     GRTLALPNVSDRSIQDFIQTDAAINPGNSGGPLVNTGGRVLGVNSAIASRTGFYSGYG
                     FAIPINLARQVMDQLISHGEVRRSVLGITVRNASANDAAYVGLPDIRGVLVEDFGSDT
                     SAAKRAGLEPGDIIITVDGKPVEYVGQLQQRIAFRKPGETVKVEVARKGGVRKTYDVR
                     LQTLPGAAAVADRQTGNDAGGADEVGAAMGKLGVTVAPVTRDDVARFDLGPAQRGLLV
                     TDVTAGGPAWGELVDPDRGGPDIILEIEGQPVKTTTELRDALKAMKPGDIVSLRVYNT
                     QAKNRRVERIRLGE"
     gene            5926..7920
                     /locus_tag="VF061_03790"
     CDS             5926..7920
                     /locus_tag="VF061_03790"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HEX6668652.1"
                     /translation="MDRTHMARAPWTGLFALLALAGCGSGRTDGSLPSPEAGPAGTAA
                     PPARVMEVPVLETFGAAVAKGTRARSGAPGPRYWQQWADYRLAAELNPVSKRLTGTAA
                     IRYHNRSPDTLAVVYVHLLHNIFAPGSRHNTDIPWAVEGYQLSRVAAQGASLAEGKGE
                     GAGYEVDGTVMRIRLPKPLAPGNATDLEFGYRIRIPPDGAPRGGQDGEVYYISYWYPQ
                     MAVYDDVNGWQTDQYYGNAEFYMGYGNYDVALTVPAGWLVSSTGTLTNAADVLSAQTR
                     ARLDSAMTAKEVVRVVTEADRGAGKATAAGTDGKLTWRFRAENVRDVAWGASPSYLWD
                     ATNAEVGDADGDSAPDTARVDAFWRPEMRRSHWDQAARYGRHSVEFLSKYLWPYPYPH
                     MSAVDGPTSCGGMEYPMMTCIGGQWDTLSMYEVVVHEIAHMWHPMQVGSDEKRFAWMD
                     EGFAQYTQSQAMADFFQGYDDEAENREPYVNLAIAGGEVELMRHGDRYPNYTAYGTAS
                     YYKTATALVALRGVLGKETFEKAFREYGKRWQYKHPLPYDFFNTVEDVAGRDLSWFWR
                     EWFFETWKLDQAIDTVTTVGDSLEVVVENRGRAPMPVHLVVTRSEGAPQTVEIPVSAW
                     FAGEKRASVRVARQPAIKTIEIDPERDFPDIDRGNGVWPR"
     gene            8047..10254
                     /locus_tag="VF061_03795"
     CDS             8047..10254
                     /locus_tag="VF061_03795"
                     /inference="COORDINATES: protein motif:HMM:NF011071.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional alpha,alpha-trehalose-phosphate
                     synthase (UDP-forming)/trehalose-phosphatase"
                     /protein_id="HEX6668653.1"
                     /translation="MSRLLIVANRLPVTVRSTSSGVEVERSAGGLATGLSRPHGQSGG
                     LWIGWSGAGDDLSPAQQAELERQLASQRLVAVPLTDELVSRYYEGYSNGVLWPLFHYL
                     LDQVPLQAGDWPAYVQANEQFADVVAAQYRPGDLIWVHDYQLLLLPGLLRRRLPDARI
                     GFFLHIPFPSEELFRTLPARRQLLEGMLGADLVGFHTPTYLRHFAIALTDILGLAVDI
                     DRVQLPGREVRLGVFPMGVDAALFQGLARDPAVEAEAEALRGDGSVRILVGVDRLDYT
                     KGIPRRLLAFERMLELHPELREKVRLVQVAVPSRTGVEAYQDFRSVVDGLVGRINGVF
                     GTPRWVPVHYIFRGLSAPDLVALYRAADVMLVTPLRDGMNLVAKEFIASRADGDGVLV
                     LSEFAGASWELPEALQVNPYDTDGTAEVIFRALTMEPEERRARLAPLRERVATFDVHR
                     WVSLFLEQLERVTEPAARAVSPTAGEAALRDELVRALERNDELLLLLDYDGTLVPFTA
                     TPELARPDAGLIHLLRTLATRPETEVHIVSGRSREALEQWVGNLPIWLHAEHGFWSRP
                     PGQAEWNPAADIHGSWREPVLGILRDITARTPGSLIEVKAVAIAWHYRMADLETGARR
                     ANELRIHLNQLLSNHPVEILAGNRVLEIRPYGVHKGRIIPPMSPEREARTTILAIGDD
                     RTDEDLFTSLPPEAISARVGPGATRARFRLDGTAAVRSLLQMLAETGVREHQA"
BASE COUNT         1491 a         3621 c         3691 g         1584 t
ORIGIN      
        1 ggtggtgggt gaaccagagg tcgctgcggc agtcgcccgg agagtccacc gccttctcgt
       61 gccactggac caggcgctgg gtgttggtga acgagccgtc catctcgggc acgctggcgg
      121 aagggaagaa gaagacctcg gtctggatgg cggacgggtc ttccacgtcg ggcgccatcc
      181 agaactccgc cgtctcggtc cggaagaggt ccttcaccac cagccactcc agccgcgcca
      241 gcccggcccg ctggtagacg gcgttctggc ctcccaccgc cgggttctgt cccagcgcca
      301 tgaagccctt gagcgtgccc tcgtgcatgg cgacgaacat gggcaggtgc gagtggtcgc
      361 ccacgttctt gggcaggtac tggtaccccc actcgttctc cggtgtggca gcgtcgccgt
      421 accaggccct gaggaacgag accatgtact tccgcccgtt ggcccaccac ccggtcgtcg
      481 gcatctcatt ctggagccag ccctccagcg tgtcgtgccg ggccacctgg gcgctgggag
      541 cggtgaggta cccgggcagg aggttgtaga gcgtggcgat gtcggtggag ccctggatcg
      601 tcgcgtgccc gcgcagcgcc aggatcccgc cgccggggcg gcccatgttg cccagcagcg
      661 cctgcaggat cgacgccgtc cggatgtact ggaccccgac cgtgtgctgg gtccagccca
      721 ccgcgtaggc aaaggccgcc gtgcgctcgc gcccggagtt gtcgcacagc gtcttcgcca
      781 cctcgaggaa gtgctcctcg ctgcagccgc agatccggga gaccatctcg ggcgtgtagc
      841 gggcgtagtg ccgcttcagg atctggaaga cgcaacgggg atgctggagg gtcggatcgg
      901 tgcgcggcgg attccgccgg tagtccaccc cggggttgcc ttccttggcg tggggctggt
      961 tcgcactctt gtccatctcc ggctggcccg ggatggtgcc gtcgtacgcc cacagcctgg
     1021 tgtcgtacga gcgggtcttg gggtcgaagc cagagaagag cccgtcgaga tcctcggtgt
     1081 cccggaaggt ctccgagatg atcgtcgagg cgttggtgta gtggaggacg tattccttga
     1141 accagcgctc gttctggatg atgtagttga ccaccccgcc gaggaaggcg atatcggtgc
     1201 ccgcccggat aggcacgtgc aggtcgcaca tcgccgaagt gcgggtgaac cgcgggtcca
     1261 cgtggatcag cttggcgccg cgctcgcgtg ccttcatggc ccagcggaac cccaccggat
     1321 ggcactcggc gaagttcgag cccatgatca cgatcgcgtc cgagttctgc agatcctgct
     1381 gcgccgtcgt cgcgccgccc ctaccgaagc tcgtccccag accggggacc gtggcggagt
     1441 gtcatattcg ggcctggttt tcgatgaaca ctccgcccaa cccccggaac atcttggcct
     1501 ggacgtagtt ccactcgttg tccatggtgg ccccgccgag ggagccgacg ccgagcatat
     1561 ggttgagcgt cacctcgcgg ccgttgatgg tgccggtacg gcggaaggtc gcgtcgcggg
     1621 tctgcttgac ccggtcggcc accatgtcca tggcccgttc aagctcgatc ggctcccagg
     1681 cggtgccgcc gggcttccgg tacagtgccc gggtggggcg attgggattg accgtgagct
     1741 ggaagctggc cgcgcccttg gggcagagag tgccccggct gatcggcgac tcggggttac
     1801 cctcggcgtt gatcagccgg ccgtcgcgga cgtggaggag gagcccgcag ccgaccgcac
     1861 agtaggggca gacggagggg accgcgcggg tgcgctcgat cttccactcg agcggcaccg
     1921 tggccgcgcg ggcacggtcg ggatccagcc cgagagccac cagcccgccc agcgcgccgc
     1981 cggcggtggt gagtccggac tgcctgagaa actggcgccg ggagaggctc attcagctcg
     2041 tgcccgttgc tcctgcccgt gggtgctgtg accgccgcga tcagccggcg ctcatccggc
     2101 gtgagatcgg atttcgtgcc ggggcggctc cttgcacaac atggctatca tcatcccgct
     2161 cggcaagttc cgaaacaccc ctgccatgcc cgccgtagag cccagaccta ccgaccttcc
     2221 cgggagagcc catgatcgcc cgttacggcc tgctgctcgc cgcgctggcc gtccccgccg
     2281 ccgcccgcgc ccagaccgcc gccgactctt ccgccatccg tgcggtcgcg ctggactacg
     2341 ccgaagggtg gtacgagggc aacgccgagc ggatgagccg agcggtgcat cccgagctgg
     2401 tgaagcggat cgtggtgagc gacagcgcca ccaaccgcag cgtgatccag aacatgggcg
     2461 ccaccgcgct ggtgaacggc acccggcgcg gctggggcaa ggagacgccg gcggatcggc
     2521 ggcagaagga cgtcaccatc ctcgacatct tcggcaacgc cgccagcgtg aaggcggtga
     2581 tggccgattg gatcgactac ctccaggtcg ccaaggtgga cggccggtgg gtgatcgtga
     2641 acgtgctgtg ggagcggaag ccggggagca agggctgatg cgcctccgcc ccgccgcgct
     2701 gggcggcctc gcgacgctcc tgaccgccgc ggccgcgtct ccctcggatc ccccgtcgcg
     2761 ccgctcccag gacccccctc gcagcgccgc gtggctgtcc ctgctcccgg acggcgaggc
     2821 caagcgcaag ttcatcctcg actgcaccgg gtgccaccag ttcgaccaga cgatcgcccg
     2881 gccggggggg gagcctcgca ccgaggccca gtgggtggag gcggtgaccc ggatgctcgg
     2941 ctacgccggg gcgaccacct cgttcccggt catcgcggcc gaccgcgacg ccggcgccac
     3001 cgcggcctgg ctggtgagga gcctgcgcgg ggccgacgtc gccgacctgc cggtggcggc
     3061 ctcgcgcccg gccgacgtgc gggagtacct gatgcccgtc gcccaggacc tgccccacga
     3121 cctggtcgtg gagccgggcg gggacgtggt gatcaccggg atgttcaccc accggctcta
     3181 ccgcctccag caggagaccg gtgcgctgag cgagatcgag atccgcggcg tgcccagcgc
     3241 caatccccgc gccatcgacc gcgacgcgga gggacgcacc tgggtggtgc tggggcagcc
     3301 cacccggctc gcgatggtcg cggccgacac cgcatggcgc agctgggacg tggggatgta
     3361 tccccatagc ctcgccgtcg cgcccgacgg cagggtgtgg ttcaacggac acttcacccg
     3421 tgagcccgag ctgatcgggt acgtggatcc ggagcgggac accgtcgtga cccatcgtgt
     3481 gccgccccat ccgacgctgg cgaaaggtcc gggcggcccg attccctacg agatccgcgc
     3541 ggccccggac ggccgcatct ggctgggcga gctgcagggc aaccgcctcg tcgcgttcac
     3601 gccgggcagt gggaagtttc ggagctacac catgcccacc ccgcacagcg ggccgcggcg
     3661 cttcgacgtg gacgcgaagg gcgtgttgtg gatccccgcc tactcggcga acctgctggt
     3721 ccgcctcgac ccggcgacgg ggaagttcac ggagatccgg ctgccggtga aggacgcgct
     3781 gccgtacgtg gcccgggtgg acccgcggga cggcgccatc tggatcggca ccggtgcggc
     3841 ggacgcgctg ctccggtacg acccgcgctc ccgactgttc gagaccttcc ccctgccgag
     3901 ccggggcgcg ctggtgcggc acctggcggt ggatccggag agcggagccg tgtggctggc
     3961 gtacggcgcc tcgcccggga tcccggcgag agtggcgcgg gtcgtggtcc aggagaaagg
     4021 gcgtgaaagg tggaacgtga aaagtgaaaa gtgaaaggtg aaatgggaga tccgcccccc
     4081 ccttttcacc tttcacctgt cacttttcac gcttcttccg gcttcacgcc tttcccgtcc
     4141 tcaggtcgct ctcactcccc cagcctgatc cgctccaccc gccggttctt cgcctgcgtg
     4201 ttgtacaccc gcaggctcac gatgtcaccc ggcttcatcg ccttcagcgc gtcccgcagc
     4261 tcggtggtgg tcttcaccgg ctggccctcg atctcgagga tgatgtccgg cccgccgcgg
     4321 tcgggatcca ccagctcgcc ccaggcgggg ccgccggcgg tgacgtcggt gaccaggagc
     4381 ccgcgctggg cggggccgag gtcgaagcgg gcgacgtcgt cccgggtcac cggagccacc
     4441 gtcacgccga gcttgcccat ggccgcgccg acctcgtcgg cgcccccggc gtcgttcccg
     4501 gtctgccggt cggcgaccgc cgccgccccg ggcaaggtct ggagcctcac gtcgtaggtc
     4561 ttccgcacgc cacccttccg cgccacctcg accttcaccg tctcgcccgg cttgcggaag
     4621 gcgatccgct gctgcagctg gccgacgtac tcgacgggct tgccgtccac cgtgatgatg
     4681 atgtcgccgg gctcgaggcc ggcgcgcttg gcggcggagg tgtcgctgcc gaagtcctcg
     4741 accaggacgc cccggatgtc gggcaggccg acgtaggccg cgtcgttggc ggaggcgttc
     4801 cgcaccgtga tgcccaggac cgagcggcgg acctcgccat gggagatcag ctggtccatc
     4861 acctggcggg ccaggttgat ggggatcgcg aacccgtagc cggagtagaa tcccgtccgg
     4921 ctggcgatcg ccgaattcac gcccagcacc cggccgcctg tattcaccag gggcccgccc
     4981 gagttgccgg gattgatcgc ggcatcggtc tggatgaagt cctggatgct ccggtcgctc
     5041 acgttcggca gcgccagggt ccggcccttc gcgctgatga tgcccgaggt gacggtgaag
     5101 gtcaggttct cgcccagcgg gttgcccacg gccaggaccc actcgcccac ccgggccgcg
     5161 tcgctgtcgc ccagcggagc gggggtgagg ttgttcgcct cgatcttgac taccgcgagg
     5221 tcggtggcgt cgtcggtgcc caccaccttg gccttgaact cgcgccggtc gagcagccgg
     5281 acgatgacct cgtcggaacc gtcgaccacg tgggcgttgg tcaggatgta gccgtcgcgg
     5341 gagacgacga accccgaccc ggccgcctcc tggaactcgg gctgctgcgg cagccggggc
     5401 atgaactgct cgaagcccgg cggcagctgc gggtgcatcc gctcggaggg ttcgtttcgc
     5461 cggcccgact tgataaagac cacgctgggc ttgaccgcct cggctaccga ggcgaaggcc
     5521 tcgctcaggt tctggaggtt ggcgaccgcc gcgggcgggg gggtggcggt gcctgttgtt
     5581 tccgccgcgt agcgggagtc ctgctgctga gcttcggtga agccgggaat gttgagcacg
     5641 ccggccagca tcaggccggt gagaaaggcg agcgcggagc cgaggatggg gaaccggcgc
     5701 agcgaacctc gagacgtcat gggcatctcc gtgtagggat cggcgaccgc ggggccgccg
     5761 gatacttggt tctgatgccc aagggggttc cagcgtcgcg ccacgtttcg gtccgcacca
     5821 cccgaaaccg aggcttgcct gggacccgta gtcaggcgat catccgcccc cgaactgggc
     5881 ccggaccgga ctcggccgga ccggactacc gcactggaga agctgatgga ccgcacgcac
     5941 atggctcgcg ccccctggac ggggctgttc gccctcctcg ccttggcggg ctgcggctcc
     6001 ggccgcaccg acggctcgtt gccttctccg gaggccggcc cggccggcac cgcggcgccc
     6061 ccggcgcggg tcatggaagt cccagtgctg gagaccttcg gcgcggcagt cgccaagggg
     6121 acccgcgccc gctcgggcgc ccccggcccc cgctactggc agcagtgggc ggactaccgc
     6181 ctggccgcgg agctcaaccc ggtgtccaag cgcctgaccg gcacggccgc gatccggtac
     6241 cacaatcgct cgcccgacac cctcgccgtc gtctatgtcc acctgctcca caacatcttc
     6301 gccccgggca gccggcataa caccgacatc ccctgggcgg tggagggcta ccagctctcc
     6361 cgggtggccg cgcagggcgc cagcctggcg gagggcaagg gcgagggggc cgggtacgag
     6421 gtggacggca ccgtcatgcg gatccggctg cccaagccgc tcgccccggg caacgccacc
     6481 gacctcgagt tcggctaccg gatccggatt cctcccgatg gagcgccgcg gggcggccag
     6541 gacggcgagg tgtattacat cagctactgg tatccccaga tggcggtgta cgacgacgtg
     6601 aacgggtggc agaccgacca gtactatgga aacgccgagt tctacatggg ctacgggaac
     6661 tacgacgtgg cccttacggt cccggcaggc tggctggtct ccagcaccgg caccctgacc
     6721 aacgcggcgg acgtgctgag cgcgcagacc cgggcgcggc tcgactccgc gatgaccgcg
     6781 aaggaagtcg tgcgcgtggt gaccgaagcc gaccgcgggg cgggcaaggc cacggcggca
     6841 ggcaccgacg gcaagctcac ctggcgcttc cgggcggaga acgtgcgcga cgtggcctgg
     6901 ggtgcgtcgc ccagctacct gtgggacgcc accaacgcgg aggtgggtga cgcggacggc
     6961 gacagcgccc cggacacggc gcgggtggac gccttctggc gacccgagat gcggcggagc
     7021 cactgggacc aggcggcccg gtatggccgg cactcggtgg agtttctctc gaagtacctc
     7081 tggccctacc cctatcccca catgtcggcg gtggacggac ccacctcgtg cggcgggatg
     7141 gagtatccga tgatgacctg catcgggggc cagtgggata cgctcagcat gtacgaggtc
     7201 gtggtccacg agatcgccca catgtggcac cccatgcagg tgggctcgga cgagaagcgc
     7261 ttcgcctgga tggacgaggg gttcgcccag tacacccagt cccaggcgat ggccgacttc
     7321 ttccaggggt acgacgacga ggcggagaac cgggagccgt acgtcaacct ggccatcgcg
     7381 ggcggcgagg tggagctgat gcggcacggc gaccgctacc ccaactacac ggcctacggc
     7441 accgcgagct actacaagac cgcgaccgcc ctggtcgccc tccgcggcgt gctggggaag
     7501 gagacgttcg agaaggcctt ccgggagtac ggcaagcggt ggcagtacaa gcacccgctg
     7561 ccctacgatt tcttcaacac ggtggaggac gtggccgggc gggacctctc ctggttctgg
     7621 cgcgagtggt tcttcgagac ctggaagctg gaccaggcca tcgacaccgt caccacggtg
     7681 ggcgactcgc tggaggtggt ggtggagaac cgcggccggg cgccgatgcc ggtgcacctg
     7741 gtcgtcaccc ggagcgaagg cgcgccccag acggtggaga tcccggtgag cgcctggttc
     7801 gcgggggaga agcgggcgtc cgtccgggtc gcccggcagc cggccatcaa gaccatcgag
     7861 atcgaccccg agcgcgactt cccggacatc gaccggggga acggggtgtg gcctagatga
     7921 gccgccggat gtcaccctga acgccgcgaa gggggccatg ttcgaacgtg gcccccttcg
     7981 cttcgctcag ggtgacaatg acatgcaccg gctcccgctt cccccctccg ccgctacctt
     8041 taccccatgt cccggctcct catcgtcgcc aaccgccttc cggtcaccgt ccgctctacc
     8101 tcgagtgggg tggaggtcga gcggagcgcc ggggggctgg ccaccggcct ttcccggccc
     8161 cacggccaat ccggcggcct ctggatcggg tggtctgggg ccggggacga cctcagcccc
     8221 gcgcagcagg cggagctgga gcggcagctg gcctcccagc ggctggtggc cgtaccgctc
     8281 acggacgagc tggtgagccg gtattacgag ggctattcca acggggtcct ctggccgctg
     8341 ttccactacc tgctcgacca ggtgcccctc caggccggcg actggcccgc gtatgtccag
     8401 gccaacgagc agttcgccga cgtagttgcg gcgcagtacc ggccgggtga cctgatctgg
     8461 gttcacgact accagctcct gctcctcccg ggcctgctcc ggcgccgcct gcccgacgcc
     8521 aggatcgggt tcttcctcca catcccgttc ccgtcggagg agctgttccg gaccctgccc
     8581 gcgcgccgcc agctgctcga ggggatgctc ggcgccgacc tggtgggctt ccacacgccc
     8641 acctatctcc gccacttcgc catcgccctg accgacatcc tgggcctcgc cgtggacatc
     8701 gaccgggtcc aactgcccgg ccgagaggtc cggctcggtg tcttcccgat gggcgtggac
     8761 gccgcgctgt tccagggcct ggcccgcgac ccggcggtgg aggcggaggc cgaggcgctc
     8821 cggggcgacg gcagcgtgcg gatcctggtg ggggtggacc ggctcgacta caccaagggc
     8881 atcccccgcc ggctgctcgc gttcgagcgg atgctggagc tccacccgga gctgcgggag
     8941 aaggtgcgcc tggtgcaggt cgcggtgccc tcgcgcaccg gcgtggaggc ataccaggac
     9001 ttccgttcgg tggtggacgg cctggtgggc cgaatcaacg gcgtcttcgg caccccgcgc
     9061 tgggtcccgg tgcactacat cttccgcggg ctctcggcgc ccgacctggt cgcgctctac
     9121 cgggccgcgg acgtgatgct ggtgacgccg ctccgcgatg ggatgaacct ggtggccaag
     9181 gagttcatcg cgtcccgggc ggacggcgac ggggtgctgg tgctgagcga gttcgccggc
     9241 gcctcgtggg agctgcccga ggcgctgcag gtgaatccgt acgacaccga cggcacggcg
     9301 gaggtgatct tccgcgcgct gacgatggag ccggaggagc gccgggctcg gctggcgccg
     9361 ctgcgcgagc gggtcgccac gttcgacgtg caccggtggg tctccctgtt cctggagcag
     9421 ctggagcggg tgacggagcc ggccgcccgc gccgtgtcgc ccaccgccgg cgaggccgcg
     9481 ctccgggacg agctcgtccg ggccctggag cggaacgacg agctgctgct cctgctcgac
     9541 tacgacggga cgctggtgcc gttcacggcg acgcccgagc tcgcccggcc cgacgccggg
     9601 ctgatccatc tgctccgcac gctcgcgacc cggccggaga ccgaggtgca catcgtgagc
     9661 gggcggagcc gcgaggcgct ggagcagtgg gtcggcaacc tgcccatctg gctccacgcg
     9721 gagcacgggt tctggtcccg cccgcccggc caggcggagt ggaacccggc ggccgacatc
     9781 cacggctcct ggcgcgagcc ggtgctgggg atcctgcgcg acatcacggc gcgcacgccg
     9841 gggtcgctga tcgaggtcaa ggcggtggcg atcgcctggc actaccggat ggccgatctg
     9901 gagaccgggg cccggcgcgc caacgagctc cggattcacc tgaatcagct gttgagcaac
     9961 catccggtcg agatcctcgc cggcaaccgg gtgctggaga tccggcccta cggcgtccac
    10021 aaggggcgga tcatcccgcc gatgtcgccc gagcgcgagg cgcgaaccac gattctcgcg
    10081 atcggcgacg accggaccga cgaagacctc ttcacctcgc tcccgcccga agcgatcagc
    10141 gcgcgggtgg ggccgggcgc gacccgggcg cgtttccggc tggacggcac cgcggccgtg
    10201 cggtcgctgc tccagatgct ggccgagacc ggcgtccggg agcaccaggc ctagccatga
    10261 gcctgctggc cccgtccgtg accgaacgcg accacgtgct ggggcccccc gatgcgcggg
    10321 tcaccctggt ggagtacggc gacttcgagt gtccccattg tggcgccgtc catcccatcg
    10381 tgcaggc
//
LOCUS       DASUYN010000194         4884 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_62313, whole genome shotgun sequence.
ACCESSION   DASUYN010000194 DASUYN010000000
VERSION     DASUYN010000194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4884)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4884)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4884
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62313"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(222..992)
                     /locus_tag="VF061_03800"
     CDS             complement(222..992)
                     /locus_tag="VF061_03800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX6668654.1"
                     /translation="MEDWLLPLQQGQPEVAWDRFISRHRRLIFAAIRHYTQDYDDGME
                     LFAHLCEKLREGDMRRLRTRAEDPSPRAQFSTWLVAVVRHAAVDWFRHRDGRHRLSQV
                     AQELPSRQRRIFELVFLDRRSHSEAFELLSQEHPGLGFRAFLAELRATYHAVVQGRRG
                     LLLRELGPPPPDSSADDPHHPIESAERRERLQAALDGLAPEDRLTAELYVIDGLPAGE
                     VAKVLGLPNPKAVYNRVYRILAELRAGLERSGIRRGDL"
     gene            complement(1204..1488)
                     /locus_tag="VF061_03805"
     CDS             complement(1204..1488)
                     /locus_tag="VF061_03805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668655.1"
                     /translation="MYVLVQHTISDPAAFWNAADPRTLSPEVKLHHTFPTPDGTRAVC
                     IWEAQSVDAVRNLLEPLVGRVSRNEYFPVENRDGFAKPSRVPQTAAASAP"
     gene            complement(1554..2345)
                     /locus_tag="VF061_03810"
     CDS             complement(1554..2345)
                     /locus_tag="VF061_03810"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX6668656.1"
                     /translation="MTAHVSAIRAVIVDDEPLARARLRMLLARQADMQVVAECAEGAE
                     AARAIARVRPEVVFLDIEMTETSGMEVATALGDDPLPAVVFVTAHERYALEAFEVRAL
                     DYLLKPFDEARFLATLDRVRAWTAAVRSRRSHEHLVAILRELSDAPVDELERLRAPAM
                     PLRFADLELDPATHEVRRAGRPVPLRPREYELLRALVIRGGAVTSRRELLHEVWRYQE
                     GVNSRTVDTHIAVLRRKLGHRPGEPGYILTVAKAGYRLLEQQTVG"
     gene            complement(2342..3487)
                     /locus_tag="VF061_03815"
     CDS             complement(2342..3487)
                     /locus_tag="VF061_03815"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HEX6668657.1"
                     /translation="MAVPAPILPSEEPAGERPARLADLVGLGRLFLGGLGFWTAVALV
                     FAVQDLLVLGTSRFSVHRLIVGQLASWWPCALLTPAIAAGALRIRASRPPLGRAILLH
                     ALGAALFLSVGGALMGTLESLLPWAREGPGLATAAGGVIRYLGPDLLLYFLVVAATEA
                     AAHAWESRRRGIAAAAYARQLAEARLHVLSAQLQPHFLFNTLHAISALVWQDPARAER
                     LLARLSEMLRLTLRSGTRVETTLAEELALLQRYAEIQEARYGERLRVGFEVEPAVRTA
                     MVPRLILQPLVENAIRHGITRRITPGRVDVRAWTVGGRLHLAVCDDGVGLGHGRPVRE
                     GVGLSITRARLRQLYGLEQLVELCPAPGGGAVCALSFPLHLAETAAP"
     gene            complement(3550..4512)
                     /locus_tag="VF061_03820"
     CDS             complement(3550..4512)
                     /locus_tag="VF061_03820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668658.1"
                     /translation="MRHLALFAALTLVAAACNTATDPADPALGEAAAPEASQGRPDLR
                     EARADLIRAGNDVSAAIGSEGIVAGLGGAFTSNGLLLSPRRPTIEGREAATTFLAGDP
                     NAPTAMQWEVIVADVSADADQGYTWAQGTTTIDLGAGPTIIPSFYLAYWRRTDTGRWR
                     IAAFVFNLGGPQSLPLPDGFGTPDRRHRRSYPGTRGEFRQELLATDAAFSAASVSDGV
                     GPAFERYAAPNAIAVGGGFVFGPEAIGEAFTGGPDDVVSWEPRFAVAAGSGDLGFTVG
                     DAVFDIPGVGMFYTKYLTVWQRQQDTKEWRFVADLGSSRPAPAT"
     gene            complement(4620..>4884)
                     /locus_tag="VF061_03825"
     CDS             complement(4620..>4884)
                     /locus_tag="VF061_03825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668659.1"
                     /translation="FAGRPGTADGLKVDVHGNVFGVGPGGVYVVSPAGELLGWIDFAG
                     HVGNVAWGEDGSTLFVAANAAVYRLRTSARGAGWMGASATRGP"
BASE COUNT          746 a         1670 c         1818 g          650 t
ORIGIN      
        1 gcagtgctcc aggtggcgca cgagatgcgg gtcgccccgg aagtcgggct cgcagacatg
       61 gcgaacgagc gccagcggat cagggtgcgt catcgggttc atgggctacc gtaccagtcg
      121 ggacccaggg tgggagagcg agcgaacgac agcaccagcc gcgtcgtact ccgttggacg
      181 gacaactcgt ggaaacttgc ttgtcgtgag ggatagggtc ctcacaggtc gccgcgtcgg
      241 atgccggatc gctccagccc ggcacgaagc tcggccagga tccggtacac gcggttgtag
      301 accgccttgg ggttggggag gccgagcact ttcgcgacct ctcctgccgg aagaccgtcg
      361 atgacgtaga gctcggccgt cagacgatcc tccggtgcca ggccgtcgag agcggcctgg
      421 aggcgctcgc ggcgctcggc ggattcgatc gggtggtggg gatcgtcggc cgatgaatca
      481 ggcggcggcg gtcccagctc gcgcaggagc agtccccgcc gtccctgcac gacggcatgg
      541 taggtcgcac gcagctctgc caggaacgcg cggaagccaa gcccggggtg ctcctgactg
      601 agcagctcga aggcctcgct gtgacttcgg cggtcgagga acacgagctc gaagatccga
      661 cgctggcggg agggcagctc ctgcgcgacc tgcgagagcc ggtgccggcc gtcacggtga
      721 cgaaaccagt ccactgcggc atggcggacg accgcgacca gccaggtgga gaactgcgcg
      781 cgggggctgg ggtcttccgc gcgagtgcgc aggcgccgca tgtcgccctc gcgcagcttc
      841 tcgcacaggt gcgcgaagag ctccatcccg tcgtcgtagt cctgggtgta atgccggatg
      901 gcggcgaaga tcagccgccg gtggcgggag atgaatcgat cccaggccac ctccggctga
      961 ccctgctgca gggggaggag ccagtcctcc atgacttgcc tcgcgctcgg gcctcccgat
     1021 cggttcgccg atcacatacg gtccggcgcg gcgcaacgtg agtcgtcgga ggggagtggt
     1081 ccgctggaga ctagtctacc ggtccgccgg gaaaccgcaa cagagtttcg gctccgcccg
     1141 gctcaagcca gagacgtacg gagggatcga gtcggcgatc ccgaaggtgc ggcgcgcgga
     1201 gcgctaggga gcgctggcgg cggccgtctg cggcacccgc gagggcttgg cgaacccatc
     1261 ccggttttcc accgggaagt attcattccg gctgacgcgg ccaaccagcg gctcgagcag
     1321 gttgcggacc gcgtccaccg actgagcttc ccagatgcag acggcccgag tgccgtcggg
     1381 cgtggggaag gtatggtgaa gcttgacttc tggggacagg gtgcgcgggt cggctgcgtt
     1441 ccagaacgca gccggatcgg agatggtgtg ctggaccagg acgtacatag gtccctccga
     1501 gagaatgatg aagtgggtgt gggactctta aatgggggcc ggtaccgggg ctgtcaaccc
     1561 acagtttgct gctccaacag ccggtatccg gccttcgcga cggtgaggat gtagcccggc
     1621 tcccccggcc ggtggcccag cttccgccgc agcacggcga tgtgggtgtc cacggtccgg
     1681 ctgttcacgc cttcctggta gcgccacacc tcgtgcagca gctcccgccg gctcgtcacc
     1741 gcgcccccgc ggatcaccag ggcgcggagc agctcgtact cccgcgggcg gaggggcacc
     1801 ggacgccccg cgcggcgtac ctcgtgcgtc gcggggtcga gctcgaggtc ggcgaaccgg
     1861 agcggcatcg ccggcgcgcg gagccgttcc agctcatcca ccggtgcgtc ggacagctcc
     1921 cgcaggatgg cgaccaggtg ctcgtgagag cgccggctcc gcaccgcagc ggtccaggcg
     1981 cggacccggt cgagcgtcgc gaggaagcgc gcttcgtcga acggtttgag caggtagtcc
     2041 agcgcccgca cctcgaatgc ctccagggca tagcgctcgt gcgcggtcac gaataccacc
     2101 gcgggcagcg ggtcgtcgcc gagcgcggtg gccacctcca tgccgctggt ctccgtcatc
     2161 tcgatgtcga ggaacacgac ctcaggccga acgcgcgcga tcgcgcgagc ggcctccgcg
     2221 ccctcggcgc actccgccac gacctgcatg tcggcctgcc gggcgagcag cattcgcagc
     2281 cgggcccggg cgagcggctc gtcgtccacg atgaccgcgc ggatcgccga gacgtgtgcg
     2341 gtcacggcgc cgccgtctcc gccaggtgca gcgggaagga gagcgcgcac accgcgccgc
     2401 cgccgggcgc cgggcagagc tccaccagct gctccaggcc atagagctga cggagccgtg
     2461 cgcgggtaat cgacaggccc acgccttccc tgaccgggcg gccgtggccc aatccgacgc
     2521 cgtcgtcgca aaccgcgagg tgcagccggc ccccgaccgt ccacgcgcgc acgtccaccc
     2581 ggccgggggt gatgcggcgg gtgatgccgt gccggatcgc gttctccacc agtggctgga
     2641 ggatgagtcg cggcaccatc gccgtgcgca ccgcgggctc cacctcgaac ccgactctga
     2701 gccgttcccc gtagcgcgcc tcctggatct cggcgtagcg ctggaggagc gcgagctcct
     2761 ccgcgagcgt ggtctccacc cgtgtcccgc tccggagcgt gagccgcagc atctcgctca
     2821 agcgcgccag cagccgctcg gcccgggcgg ggtcctgcca gaccagcgcc gagatcgcgt
     2881 gcagggtatt gaagaggaag tggggctgca gctgcgcgct gagcacgtgg agtctcgcct
     2941 cggcgagctg ccgggcgtag gcggcggcgg cgataccgcg gcgccgcgac tcccacgcgt
     3001 gcgccgcggc ctcggtcgcg gcgacgacga ggaagtacag cagcaggtcc ggtcccagat
     3061 agcggatgac gccgccggct gccgtcgcca ggcccggccc ctcgcgggcc cacggcagca
     3121 ggctctccag cgtccccatg agcgccccgc ccaccgagag gaagagcgcg gcgccgagcg
     3181 catgcaggag gatcgcccgg cccagcgggg gccgggaggc gcggatccgg agggcgccgg
     3241 ccgcgatcgc cggagtgagc agcgcgcagg gccaccagct cgcgagctgg ccgacgatca
     3301 gtcggtggac cgaaaagcgc gaggtgccga gcaccagcag gtcctggacc gcgaacacca
     3361 gggcgacggc ggtccagaac ccgagcccgc cgaggaagag ccggccgagg ccgacgagat
     3421 cggcgaggcg ggcggggcgc tcgccggcgg gctcctcgga gggcaggatc ggtgcaggaa
     3481 cggccatggt cctgaggaga cgcccgagtg ccgccgcgcg gcacccgggc gtcagcgaac
     3541 cgtcagcgct caggtggccg gggccgggcg gctgctcccg aggtcggcca cgaagcgcca
     3601 ctccttggtg tcctgctgtc gctgccagac ggtcaggtac ttggtgtaga acatcccgac
     3661 gccggggatg tcgaaaacgg cgtcgcccac ggtgaatccg aggtcgccgc tgccggccgc
     3721 gacggcgaac cggggctccc agctgaccac gtcgtccgga ccgccggtga acgcctcccc
     3781 gatcgcttcc gggccgaaga cgaatccacc gcccaccgca atggcgttgg gcgccgcgta
     3841 gcgctcgaag gcggggccga ccccgtcgga gacggaggcc gcggagaagg ccgcgtcggt
     3901 ggccagcagc tcctgccgga actcgccccg cgtgccgggg tagctccgcc tatgcctgcg
     3961 gtccggggtc ccgaacccgt ccggcagcgg gagactctgg gggccgccca ggttgaagac
     4021 gaaggcggcg atccgccacc ggccggtgtc cgtccgccgc cagtaggcga gatagaagct
     4081 ggggatgatg gtcgggccgg caccgagatc gatcgtggtc gtgccttgcg cccaggtgta
     4141 gccctggtcg gcgtcggcgg acacgtcggc gacgatcact tcccattgca tcgcggtcgg
     4201 agcgttgggg tcgccggcga ggaacgtcgt ggcggcctcg cggccctcga tcgtgggcct
     4261 gcggggcgag aggaggaggc cgttgctggt gaaggccccg ccgagaccgg ctacgatgcc
     4321 ctcggagccg atggcggcag agacgtcgtt gccggccctg atgaggtcgg cgcgggcctc
     4381 ccggagatcg ggacggccct ggctcgcttc cggcgcggcg gcctctccga gggccgggtc
     4441 ggccggatcg gtggcggtgt tgcatgcggc cgcgacgagc gtgagcgcgg cgaacagggc
     4501 gagatggcgc atgggtgggt ctccgggcgt gagtggactg gcctgctcac gggagacgcc
     4561 gcaaacggat gggtgaacgg aggtgagacg ttagagaatt gtgagacggt cgctcaggct
     4621 cacgggccgc gcgtggcgct ggcgcccatc caccccgcgc cccgggccga ggtccgaagc
     4681 cgatacaccg cggcgttggc cgcgacgaac agggtggacc cgtcctcacc ccaggccacg
     4741 ttgccgacgt gcccggcgaa gtcgatccag cccagcagct cgccggcggg gctgacgacg
     4801 tacaccccac ccgggcccac gccgaagaca ttcccgtgca catccacctt cagaccgtcc
     4861 gccgttcccg gccggccggc aaag
//
LOCUS       DASUYN010000195         3240 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_283734, whole genome shotgun sequence.
ACCESSION   DASUYN010000195 DASUYN010000000
VERSION     DASUYN010000195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3240
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_283734"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..696
                     /locus_tag="VF061_03830"
     CDS             <1..696
                     /locus_tag="VF061_03830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668660.1"
                     /translation="GLLLALGAGVDRPFSAWEEMFLPMALREHVRRVVVRGQDGTSVP
                     LVASERTLFVSTAPQPPPAPPAWLPRYLLLGALLGALAALLGRAARPRRRWARYALAG
                     VVAVWGVVGGLGGVVLTALWGLTDHAMSYRNENLLQLNPLLLALPPLMLLGLAGVPRA
                     APWARAVAWTLAGLSLAGLVLQVLPGLDQVNGPVIALLVPIHTGVAMGLWLASRPQPA
                     PVPPLPPGSRGTR"
     gene            complement(635..1327)
                     /locus_tag="VF061_03835"
     CDS             complement(635..1327)
                     /locus_tag="VF061_03835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668661.1"
                     /translation="MRAAVWSVSIVAALAAREPLEAQGGGSRFAVLPFENTGSYGQDK
                     EVFEGLELAVPALLASALDRHPGADAIPRGTLLGAMQKRDLGPSQRFDSDAAVQVATG
                     TGARYAVTGSFADFYGKLRVNARLVDGKTGEIVKVVSNDDPKLQDRAQLAAIIQVVAE
                     RLVSAAGLQPFPSGASVPAIPTEAISAFGRGLLYEGRDDRAKASEFYRSALTAFPGFP
                     EAAAGLERVGGG"
     gene            complement(1338..2204)
                     /locus_tag="VF061_03840"
     CDS             complement(1338..2204)
                     /locus_tag="VF061_03840"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX6668662.1"
                     /translation="MTYNVRFWGTRGSIPTPGPQTARYGGNTACVSVTGPDGRLVILD
                     AGSGLRPLGHELMVHRNGAIAADILLSHTHWDHIQGLPFFKPLSAPGNSFCILGAAQE
                     GVSLEEILRRQMDPMVFPVPLRALAAAIQVKEIAEGEIALSGFTARAFRLRHPGTTLG
                     FRLAPASGGRDFAYLTDNELGDGARYPVGPDWRRRLLQFLAGADTLIHDAMYAEQIVH
                     ARCGWGHSTPRQSVTLAAEAGCRRLIMFHHEPEHDDEALDRLLDDTRAFAARTAPGLE
                     VEAASEGMELPL"
     gene            complement(2301..2978)
                     /locus_tag="VF061_03845"
     CDS             complement(2301..2978)
                     /locus_tag="VF061_03845"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEX6668663.1"
                     /translation="MPLSPMEVLRKVPLFSGLSETDLAAFAELTRERSYPKGSVIVFE
                     DDPGDALFLVAAGQVKVVLIAEDGREVILSVLGEGTFFGEMAVIDEEPRSAHVIAMED
                     SSLLVLRREDFHARLRHSPEVAISLLKEISRRLRRADEKIGSLVLLDVNGRVAHLLLR
                     MADDEGGDRITRKLTHHTIAQMIGSSRETVSRTMRNLVERGIIAVTRKDITLRDRRSL
                     MLAARRA"
BASE COUNT          485 a         1092 c         1168 g          495 t
ORIGIN      
        1 gggttgctgc tggctctggg ggccggcgtg gaccggccgt tctcagcctg ggaagagatg
       61 ttcctcccca tggccctgcg ggagcacgtg cgccgggtgg tggtgcgcgg ccaggatggc
      121 acctcggtgc cgctggtggc cagcgagcga accctgttcg tgtccaccgc gccccagccg
      181 ccacccgctc cgccagcgtg gctcccccgg tacctgctac tgggggcgct gctcggcgca
      241 ctggcggcgc tcctgggccg agcggctcgt ccccgccggc ggtgggctcg gtacgcgctc
      301 gctggggtgg tagcggtgtg gggagtcgtc ggcggactgg gcggcgtggt gctgaccgca
      361 ctctgggggc tcaccgatca cgcgatgtcg taccgcaacg agaacctgct ccagctcaac
      421 ccgctgctgc tcgcgttgcc tccgctcatg cttctcggac tggccggagt gcctcgggcg
      481 gcgccgtggg cacgagcggt ggcgtggacg ctcgcgggac tgtcattggc cggactggtg
      541 ctccaggtcc tgcccggcct cgaccaggtg aacgggccgg tgatcgcgct gctggttccc
      601 attcacacag gggtggccat ggggctgtgg ctggctagcc gcccccaacc cgctccagtc
      661 ccgccgctgc ctccgggaag ccggggaacg cggtgagcgc actgcggtag aactcgctcg
      721 ccttcgcccg gtcgtcccgg ccctcgtaca ggagcccgcg gccgaaggcg ctgatggcct
      781 cggtgggaat ggcgggcacc gaggctccgg agggaaaggg ctggaggccc gccgcggaga
      841 cgaggcgctc cgccacgacc tgaatgatcg cggcgagctg ggcgcggtcc tggagcttgg
      901 gatcgtcatt ggagacgacc ttcacgatct ctccggtctt gccgtccacc aggcgggcat
      961 tgaccctgag cttgccgtag aagtccgcga agctcccggt cactgcgtag cgagcgcccg
     1021 tccccgtcgc cacctggacc gccgcgtccg aatcgaatcg ctgggagggg ccgaggtccc
     1081 gcttctgcat cgcgcccagg agcgtgccgc gagggatggc gtccgcaccc ggatggcgat
     1141 cgagggcact ggcgaggagg gcgggaaccg cgagctcgag cccctcgaac acctccttgt
     1201 cctgtccgta ggagccggtg ttctcgaagg ggaggaccgc gaacctgctg ccgccgccct
     1261 gggcctcgag aggctccctc gcggccagcg cggcgacgat cgagaccgac cacaccgctg
     1321 cccgcatcag cacctcctca cagcggaagt tccatcccct ccgaagccgc ctccacctcc
     1381 aggcccggtg cggtccgcgc ggcgaaggcg cgggtgtcgt ccagcaggcg gtcgagggcc
     1441 tcgtcatcgt gctccggctc gtggtgaaac atgatcagcc gccggcaacc cgcctccgcc
     1501 gccagcgtca cggactgccg gggggtggaa tgcccccacc cgcaccgggc atgcacgatc
     1561 tgttccgcgt acatggcgtc gtggatcagg gtgtcggctc cggcaaggaa ttgcagcagc
     1621 cgccggcgcc agtcgggccc cacgggatag cgcgcgccgt cgccgagctc gttgtcggtg
     1681 agataggcga agtcgcggcc gcccgaggcc ggcgccaggc ggaagccgag ggtggtgccg
     1741 gggtggcgga gacggaaagc gcgggcggtg aagccggaca aggcgatctc tccctcggcg
     1801 atctccttca cctggatcgc cgccgccagg gcgcggagcg gcaccgggaa gaccatcggg
     1861 tccatctgac gccggagaat ctcctccagc gacacgccct cctgcgccgc ccccaggatg
     1921 cagaacgagt tgcccggcgc gctcaggggc ttgaagaacg gcaggccctg gatgtggtcc
     1981 cagtgggtgt gggagaggag tatgtcggcc gcgatggccc cgttccgatg gaccatcagc
     2041 tcgtggccga gcgggcgcag cccgctgccg gcgtccagga tcacgagccg gccgtcgggg
     2101 ccggtgacgc tcacgcaggc cgtgttgccg ccgtagcgcg cggtctgcgg acccggtgtc
     2161 gggatggagc cgcgggtgcc ccagaacctc acgttgtagg tcatggaagc cgcgccgagc
     2221 gacgagggga catgctcgaa cgtctcccga tccggccccg accggctacg gctggagtca
     2281 ccaccgagtg gtgactgcgc tcacgcccga cgggcggcca gcatgagcga gcggcggtcc
     2341 cggagagtta tgtccttgcg ggtgaccgcg atgatgcctc gctccaccag attccgcatg
     2401 gtccgggaca cggtctcgcg gctggagccg atcatctgcg cgatggtgtg gtgagtcagc
     2461 ttgcgggtga tccggtcgcc gccctcgtca tccgccatgc gcagcagcag gtgggcgacc
     2521 cggccgttga cgtcgagcag cacgaggctg ccgatcttct cgtccgcgcg gcgcagccga
     2581 cgggagatct ccttcagcaa cgaaatcgcc acttccgggg aatgccgcag ccgggcatgg
     2641 aagtcctcgc gccgcagcac caggagactg gagtcttcca tggcgatcac atgagccgag
     2701 cggggctcct cgtcgatgac ggccatctcg ccgaagaacg tcccctcgcc gagcacggag
     2761 aggatgacct cccgtccgtc ctccgcgatg agcacgacct tcacttgacc ggccgccacc
     2821 aggaacagcg catcgccggg gtcgtcctcg aagacgatga cgctgccctt ggggtaactc
     2881 cgctcgcgag tgagttcggc gaaggcggcg aggtcggtct cgctgaggcc cgagaaaagc
     2941 gggaccttgc gcaagacctc catgggggac aggggcacga gagcctctcg gaaagcggaa
     3001 gtggttggga gtaggttact tgcgcgaggt acgagtgtca atgaagcggg gcaggggggt
     3061 cgcgcggcgg cggggcagtc gaatcgtcgc cgccccgccg agcttgaact taagccctca
     3121 aacggtttag atttggcggc ttagcgaaac ccaggagttt catgtgaagc aggatctgca
     3181 tcccaactac cggaagctga cggcggtctg cgcctgcggg aactcgttcg agacccgctc
//
LOCUS       DASUYN010000196         2049 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_946004, whole genome shotgun sequence.
ACCESSION   DASUYN010000196 DASUYN010000000
VERSION     DASUYN010000196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2049
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_946004"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..717
                     /gene="mreB"
                     /locus_tag="VF061_03850"
     CDS             <1..717
                     /gene="mreB"
                     /locus_tag="VF061_03850"
                     /inference="COORDINATES: protein motif:HMM:NF010539.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreB"
                     /protein_id="HEX6668664.1"
                     /translation="VICVPSAITEVERRAVTEAARRAGAIDAQLIEQPMAAAIGAGLP
                     IDAPVGSMVIDIGGGTTETAVISLGGIVALEAVRIGSFDIDAALQTYIRREYGIAIGE
                     RTAEEIKVAVGSADPTPDESHAEVRGRDLVSGLPRVVVLSPEEVRGAIEEVVSSIIES
                     VIRCLAKAPPELSQDFLVRGVNLVGGGGMLRGLDQRLSRETRVPVELVDAPLECVVLG
                     AGHCIEHYDALKGIFMGARR"
     gene            754..1515
                     /locus_tag="VF061_03855"
     CDS             754..1515
                     /locus_tag="VF061_03855"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX6668665.1"
                     /translation="MYDVDGDVGVITLHRPEARNALTWGMYARLEELVREADVRCLVV
                     TGADPAFCSGDDVRQVMGGGDRPPPVVTREGGPRLTPAADALLHTDIPIVAAVNGAAV
                     GWGMELALLTDLRVASERARFGELFVLRGLVSDVAGLGRLAGLVGRERAAELLFTGAV
                     IDASEAQRIGLVGRVVPHEELLPTAMELARRIAANPPLAVQRLKAGLRQALDPDWREL
                     GAWVSSSLAELFATEDHKEGVRAFLEKRPARFEGS"
     gene            complement(1512..>2049)
                     /locus_tag="VF061_03860"
     CDS             complement(1512..>2049)
                     /locus_tag="VF061_03860"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HEX6668666.1"
                     /translation="IPADNPFADGAAALPEIWSAGLRNPWRFSFDPANGDLWIGDVGQ
                     NAVEEIDLVTTAQGAGRGTDFGWSAFEGTDRYNEDQESPNHWPPIFEYRHEDGGCSVT
                     GGMVYRGEAIPALRGAYLFGDYCARGINALVADNGQLVDAATISEEPGQIVSFGTDVA
                     GEVYVLSIGGSVFRLEPA"
BASE COUNT          277 a          700 c          762 g          310 t
ORIGIN      
        1 gtcatctgcg tcccgtcggc catcacggag gtcgagcggc gagcggtcac cgaagccgcc
       61 aggcgcgccg gggccatcga cgcccagctc atcgagcagc cgatggcggc ggccatcgga
      121 gctgggctac cgatcgacgc gccggtgggc agcatggtca tcgacatcgg cggcggcacc
      181 accgagacgg cggtcatctc cctgggtggg atcgtggcct tggaggcggt gcgcatcggg
      241 agcttcgaca tcgatgccgc cctccagacg tacatccgcc gggagtacgg catcgccatc
      301 ggcgagcgaa cggccgagga gatcaaggtg gcggtaggtt cggcggatcc gacgccggac
      361 gagagccacg ccgaggtgcg gggccgtgac ctggtgagcg gccttccgcg ggtcgtcgtg
      421 ctcagcccgg aggaggtgcg gggcgccatc gaggaggtcg tcagctcgat catcgagagc
      481 gtcatccgct gcctggccaa ggccccgccc gagctctcgc aggacttcct ggtccgcggc
      541 gtcaacctgg tcggcggtgg cgggatgctg cgggggctgg accagcgcct ctcgcgggag
      601 acgagggtgc cggtggagtt ggtcgatgcc ccgctggagt gcgtggtgct cggcgccggg
      661 cactgcatcg agcactacga cgcgctcaag ggcatcttca tgggagcccg gcgctgagtg
      721 agcgcagcga gctccatgtc acggtgcgac ctcttgtacg acgtcgacgg cgatgtcggc
      781 gtgatcacgc tgcaccggcc cgaggcccgc aacgcgttga cgtggggcat gtacgcccgc
      841 ctggaggagc tggtccggga ggcggacgtc cgctgcctcg tcgtcaccgg cgccgatccc
      901 gccttctgct ccggcgacga cgtgcgccag gtgatgggcg gcggcgaccg cccgcccccg
      961 gtggtcacac gggagggtgg gcctcggctg acgcccgccg ccgacgcgct gctgcacacc
     1021 gacatcccga tcgtcgccgc cgtgaacggc gccgcggtgg gttggggcat ggaacttgcg
     1081 ctgctgaccg acctgcgcgt ggccagcgag cgggcccgct tcggcgagct cttcgtgctg
     1141 cgcgggcttg tctccgacgt cgccggcctg ggccgcctgg ccgggctggt gggacgggag
     1201 cgggcggccg agttgctgtt caccggcgcg gtgatcgacg cctccgaggc gcagcggatc
     1261 ggcctcgtcg ggcgcgtggt tccccacgag gagctcctgc ccacggcgat ggagctggcg
     1321 cgccgcatcg ccgccaaccc gccgctggcc gtgcagcggc tcaaggccgg tctccgccag
     1381 gccttggacc ctgactggcg cgagctgggg gcgtgggtgt cgtccagcct ggccgagctg
     1441 ttcgccacgg aggaccacaa ggagggcgtg cgcgcgttcc tcgagaagcg ccccgcgagg
     1501 ttcgagggtt cttaggcggg ctccagcctg aacacggagc cgccgatcga caggacgtac
     1561 acctcgccgg ccacgtccgt gccgaagctg acgatctgac cgggctcctc ggagatcgtt
     1621 gccgcatcaa cgagctgacc gttgtcggcc accagcgcgt tgatcccccg ggcgcagtag
     1681 tcgccgaaca ggtacgcgcc gcgcagcgcg gggatcgctt cgccgcggta gaccatgccg
     1741 ccggtcaccg agcagccacc gtcttcatgc cggtactcga agatcggcgg ccagtggttg
     1801 ggtgactcct ggtcctcgtt gtagcgatcg gtcccctcga aggcgctcca gccgaagtcg
     1861 gttcctcgcc ccgcgccctg cgcggttgtc accagatcga tctcctcgac cgcgttctgg
     1921 cccacgtcgc cgatccagag atctccgttg gcgggatcga acgagaaccg ccacgggttg
     1981 cgcagcccgg cgctccagat ctcagggagc gcggcggcgc cgtcggcgaa cgggttgtcc
     2041 gcggggatg
//
LOCUS       DASUYN010000197        13054 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1827813, whole genome shotgun sequence.
ACCESSION   DASUYN010000197 DASUYN010000000
VERSION     DASUYN010000197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 13054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13054
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1827813"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1560)
                     /locus_tag="VF061_03865"
     CDS             complement(<1..1560)
                     /locus_tag="VF061_03865"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HEX6668667.1"
                     /translation="MRRIPALLLPALLVACGGSRQTSSAGATPEPAPPSAEQYAGADS
                     LPLPPAPSVDSLIPPEELAAELHLAADSAADEAVLDALADAEPTEEEAKAADTAIPGD
                     DSEALAEAVTWDIDVETYNSHHRVQWYLDFFQGKGRERMGIWLNRMQRYEPMIRERLA
                     REGMPGDLVYLALIESGFSNTATSRAKAVGMWQFMKGTAKYYDLRVDSWVDERRDPFK
                     ATDAAVRHLRDLNQRFGSLYLAAAAYNAGSGRVSRGLRKLRPDPEAASADAAFFRLYD
                     TRLLRRETKDYVPKLIAAALIAKEPARHGFVVTAEEPLVYDSIVVPTMTGLDVIARLA
                     DTTVAAIRELNPQFLRLATPPATASVVRLPPGRGPMTIAAYAELPPEKRVTFVEHYVQ
                     RGETMGGIARKYRVSSLLLQDANPRVSPRRLRIGQRLVVPTGGAISSSMARRMSDPKP
                     AAGTSTSGYHRVKWGETLSEIADEYGVSQRELRSWNKLDERGSIRAGQRLRVAPPAAK
                     AGSARTHVVRWG"
     gene            complement(1645..2070)
                     /locus_tag="VF061_03870"
     CDS             complement(1645..2070)
                     /locus_tag="VF061_03870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668668.1"
                     /translation="MAAPNPLSERLRFAEFVLDRLPNGRCRAKVGLTWRDSEAFCGES
                     EGLASQAGELRCAALACVEALGQAVAQSGMTFELLGVKAVRAFDATVVIVSLATTGGE
                     VSDQRVVGSVLTETDPARAAALAVLNATNRILGNRLFMR"
     gene            complement(2157..2384)
                     /locus_tag="VF061_03875"
     CDS             complement(2157..2384)
                     /locus_tag="VF061_03875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668669.1"
                     /translation="MVEHGDRRWNVSVAAERRAHSAEWNLVFSFRCASADGQSVWVTY
                     PLSSASKAALFAQADKLSNDALAAALAERLG"
     gene            complement(2451..3113)
                     /locus_tag="VF061_03880"
     CDS             complement(2451..3113)
                     /locus_tag="VF061_03880"
                     /inference="COORDINATES: protein motif:HMM:TIGR04282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR04282 family arsenosugar biosynthesis
                     glycosyltransferase"
                     /protein_id="HEX6668670.1"
                     /translation="MGHPRPSLPLPGAGPELSTPRSGAAAALALFLHAPRLGTVKPRL
                     AAEIGDRHALRLYRIMVARTLAAAREAGLEITIWYAPSDAGPEMRYWLGEGCHLRPQA
                     SGDRGVRLGAAARAAEPDRAWLALVGDCPGLEAALLREAATIAERGEAVIGPTVDGGY
                     YLIGGMPPLPDVFTAMPWRSDRLLAETRARLAHVGVVWHELPPLTVVDTIEDAKAERL
                     LT"
     gene            complement(3062..3967)
                     /gene="ilvE"
                     /locus_tag="VF061_03885"
     CDS             complement(3062..3967)
                     /gene="ilvE"
                     /locus_tag="VF061_03885"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: protein motif:HMM:NF006185.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino-acid transaminase"
                     /protein_id="HEX6668671.1"
                     /translation="MSATLKPSKSAPGTGAGTPTVWLDGEWFDRKTATVSVYDHGLLY
                     GDGVFEGIRVYGGRIFKLAEHLDRLYDSAKAIWLTIPMPMSEMVAVTEEAVRRSGIAE
                     AYIRHIVTRGVGDLGLDPRKCAKPSVIIIVDTIRLFPEEVYETGLRVATAGTPIPHRE
                     ALSPRVKSLNYLAHILAKVEGIHAGADEVLMLDSEGHVAEGSGQNLFVVKNGVIRTPA
                     AYAGILKGVTRDTIIELGREAGYDVQETTLNRYDVYTADEAFFTGTASEVIAIRQVDG
                     RTIGTGKPGSVTRDLRSRFQALVRS"
     gene            4048..4704
                     /locus_tag="VF061_03890"
     CDS             4048..4704
                     /locus_tag="VF061_03890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HEX6668672.1"
                     /translation="MRPNRWSEPQLDRRTYPRAEYRRTAPALLELESYRCAVRDLAPG
                     GLRIEPAPAGRVWEIGERVGGVLHLRTVGQVLIDAIIGRIDRAGLALVPDAGAWPEPP
                     IIDAERSALVRWHHERRSAPRLPLPQLPGRGGTPLRDVSATGLRYALAPSERAPGTGS
                     HVAGELRLDAETVIPVRGQVIRHVGREIAVALDPPGLTPEILALLRRRFFPEGVDLPR
                     "
     gene            complement(4771..5805)
                     /gene="cheB"
                     /locus_tag="VF061_03895"
     CDS             complement(4771..5805)
                     /gene="cheB"
                     /locus_tag="VF061_03895"
                     /EC_number="3.1.1.61"
                     /inference="COORDINATES: protein motif:HMM:NF001965.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0008984 - protein-glutamate methylesterase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis-specific protein-glutamate
                     methyltransferase CheB"
                     /protein_id="HEX6668673.1"
                     /translation="MIRVFIVDDSAFVRRALARVLAAQPGFKVVGAAESGAEALAKVP
                     AADPDFVTLDVDMPGMDGLQVLPALLRWKPSLRVVMLSAHTREGAAATVSALAAGAVD
                     FIDKSTFNVMDLEFLRREVVDRMQALAPRPAPVRTNGTDARAVPDQGTLGELRDCDLC
                     LIGASTGGPPAVQRILERLPARFPVPIVVVQHMPPGFTEAFAKRLDSLSRLRVREAVE
                     GMRLLPGQVAVAPGGRHLRVSSGLAVVLTAEPAEARHIPSIDVAMRSAARSRPGRVLG
                     ILLTGMGEDGADGMATIRAGGGVTIAESEASCVVYGMPRAAVRRGGASLVLPLEEIAE
                     LLAAVPPVSP"
     gene            complement(5802..6629)
                     /locus_tag="VF061_03900"
     CDS             complement(5802..6629)
                     /locus_tag="VF061_03900"
                     /inference="COORDINATES: protein motif:HMM:NF013867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008983 - protein-glutamate
                     O-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-glutamate O-methyltransferase CheR"
                     /protein_id="HEX6668674.1"
                     /translation="MTAFPAADLKLLGDLIQERFGLTFDGVRREILAARLGPRLRELH
                     LDSPRAYYEYLRFHPLRDAEFDRLPALVTNNETYFFRETRQFDILVGHVLPERRAAAP
                     GRPLRILSAGCSSGEEPYSVGMALQGAGHLPGRVWELDACDLNADRIARAREAVYEEG
                     SLRACDPETRRRYFTQEGERFRVRERYRAGIRFFQANLLAPGFALERSAYDAVLCRNL
                     LIYFCDAAFDRLIGLLGRALMPGGYLFLGHSESLFDRSTDLTSVVVAGSVVYRKPPG"
     gene            complement(6626..8620)
                     /locus_tag="VF061_03905"
     CDS             complement(6626..8620)
                     /locus_tag="VF061_03905"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HEX6668675.1"
                     /translation="MSSAQLSPAQRIAALEAAAREPDGEGAILAALEDVAPTVRERAI
                     RLAARYVEPSILGELAADGENAVRRNAGLSALERQGPYAVPHLLDMLRGQDPELVLFA
                     LQSLSRIGFAAAGPAIPPLLDHPDPNVALAAIEAAGRLRVGEAVPALCGLLQRDLWLQ
                     LGAIAALGEIGHPDAVGPLLAFVPDSILAEPAVQALRRIAAPESLEPLLPLLLSVRER
                     SLRDPLLLAVAVVIELHPAPEPLLRRLERDIVVDGGNLVGYLAQLLETPSGASDDDEA
                     DSLLRAAATLVAAAGLAELQPVLLARLARDAMAQWIEALFGRFADRIAPRLPALLRHP
                     DADVRCGALRVGTFAPADLSAVVSHLGDSHLPVRTAACLALGRMGIDAVAPLLMERLR
                     NGEPPEQSAAAQGLARLSPEALTELDACLEPGVAEPIVLEALGVLARTPVPLLETRVL
                     QLTESPSPGIRLAALRAASRAPGSRPEIALLRALADRHTPIQAEALELMVRRGGEKSV
                     ATLVAMLGTADSLRFHVIRALGQCRAQAAAVRLRDLFPQCGPHEQLQIVSSLLRIAPV
                     WLPEFLLERLESPDLDMRRAAAQGLAETAGFEHMPVLRAFADDPDWDIRHSAARGLGR
                     LRTEENRAVLLTLARDVESVVAAAARAALEQPHDAVSSAA"
     gene            complement(8617..10092)
                     /locus_tag="VF061_03910"
     CDS             complement(8617..10092)
                     /locus_tag="VF061_03910"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0098561 - methyl accepting chemotaxis
                     protein complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX6668676.1"
                     /translation="MAKAWQQTIKDWTIRRKILTGFAVVLALTAALGWQAIRALDRLN
                     AVGNDVRAAEQIFQDSRAAILLFLVVTIAGGVVLALGLARLIADPLTQLGVLAEQVSK
                     GDLTTDIRSQSRDEIGWLEHSMRQMVKNLREIATQIAVTSRAVAQSAEEISASSTQMA
                     KGAEMQSSSTEETSSTMVEIASQMQNLARSAEALAANVDQTSASIQEMSATLTQTSEN
                     GEVLIRAVEEATATLGTMIENVGAIATRIHQVDQVSQQSVADTRDNGERLQESISSIG
                     QRSDEIGKIVKVIEGIADQTNLLALNAAIEAARAGEAGKGFAVVADEVRRLAERSVSA
                     TQEIGGVIETVQKDTKRAVTLIEHVLAGIMESINKTSGLVAEAAGAADEQAADAREVL
                     ATVGRMSALARQIASSISENAAGAQEISAAAQKMNQLTHQMSEAVTEQKHGGEMVVKA
                     VEAIAVVSRQNLVAVEQMSGAAKSLAGESDALRQRVALLQV"
     gene            complement(10190..10705)
                     /locus_tag="VF061_03915"
     CDS             complement(10190..10705)
                     /locus_tag="VF061_03915"
                     /inference="COORDINATES: protein motif:HMM:NF013731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HEX6668677.1"
                     /translation="MPTDARATAEPLLGFADSLPAAANDAAAPAAMLHLLTFTLDREE
                     FGIPVTQVREVIRVDGITRVPQVPPHVRGVTNLRGRILAVVEIRTRLGLTPATVTPTS
                     RIVVVEVMGRALGLLVDRVSQVTKVPVDSVAPPPEEVVTAETDFLTGVARWNSRLIML
                     LDLDKVLLLNA"
     gene            complement(10695..12350)
                     /locus_tag="VF061_03920"
     CDS             complement(10695..12350)
                     /locus_tag="VF061_03920"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheA"
                     /protein_id="HEX6668678.1"
                     /translation="MIAGENAFGDLLQDYIVECLPLAEQVGDAFVQLERRWRDGHPGD
                     DLLTTVKGRLHTIKGNSAMMGLNPVRDVAHALEDACGFLGRAPEARTEAAAALLVAGG
                     GLLVDMVGAASPEADPAPAAAFVERVRGFLAAAPGAAAAHSDRRHAERRGPRSEEGDA
                     AGNVVRIDFRRLDAMLEVLGEGLIQHSSLVDLYRRLTRKVGACREIEELDQSVLALQK
                     TLTRLESTLMEARLLPVSTVLSRFPRLVRDVAHAEGKKVRLEVSGGETTLDKAVLDRL
                     SEPLLHLVSNAVAHGLERSEDRTRAGKPAEGVIRLRAAAVSGRVAIRVSDDGRGLDED
                     AIRARAESLGLDVRTADASQLHNLVFVSGLSTAERVTTLSGRGLGLDVAANVIHALGG
                     TIEVESRRGQGTAFTLSLPVTLAIVRSLIVEVDRERYAVPLSHVAETVRAEPEAIRQI
                     NHQGVTQWRGDLIHVADAGAVLGTPESSRGRRPFYVVMTAGARRRGLLVDRLIGHQDI
                     VVKGLDPALGRPAVVSGTTILGDGRVACILDVVRILEGTAHAN"
     gene            complement(12347..12748)
                     /locus_tag="VF061_03925"
     CDS             complement(12347..12748)
                     /locus_tag="VF061_03925"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX6668679.1"
                     /translation="MPESFLVIDDSKLLHQMYRLIFSQGDLAGSTVHYAANGREGYAL
                     LAQHPELTLVLLDLNMPEMNGLEVLARRQAEHLHPHVPVALVTTEGSEEDEARGRAVG
                     AWDYLRKPFQPSDIQALVRRARELRRSRGAA"
     gene            complement(12752..>13054)
                     /locus_tag="VF061_03930"
     CDS             complement(12752..>13054)
                     /locus_tag="VF061_03930"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX6668680.1"
                     /translation="LKPAENGREAMELLDRSTEPFDAVLLDLRMPDMDGVEFLRALRR
                     QPVHGRTPVIVTTAEADDSDLVAQAASLGVAAIVKKPWSPQSLRSVVQKVIDSPTG"
BASE COUNT         1843 a         4724 c         4677 g         1810 t
ORIGIN      
        1 accccagcgc accacgtggg tccgcgcgct gccggccttg gcggccggag gcgccacccg
       61 caggcgctgg cccgcgcgga tgctgcccct ctcgtccagc ttgttccagg atctgagctc
      121 gcgctggctc acgccgtact catcggcgat ctcggacagg gtctcgcccc acttcacccg
      181 gtgatagccc gaggtgctgg tgcccgccgc gggcttcggg tccgacatcc ggcgcgccat
      241 cgagctggag atcgcgcccc ccgtggggac tacgagtcgc tgcccgatcc ggagccgccg
      301 cggactcacc cgggggttgg cgtcctgcag cagcaggctg ctgacccggt acttcctggc
      361 gatcccgccc atcgtctcgc cccgctgcac gtaatgctcg acgaaggtca cccgcttctc
      421 cggcggcagc tccgcgtagg cggcgatcgt catcggaccg cggccggggg gaaggcggac
      481 caccgacgcg gtcgccggcg gcgtcgcgag tcgcaggaac tgaggattga gctcgcggat
      541 cgccgccacc gtcgtgtccg ccagccgcgc gatgacatcg agcccggtca tcgtcggcac
      601 cacgatggag tcgtagacca gcggctcctc ggccgtcacc acgaacccat ggcgcgcggg
      661 ctccttcgcg atcagcgcgg cggcgatcag cttggggacg taatccttgg tctcccggcg
      721 gagcagacgg gtgtcgtaga gccggaagaa ggcggcgtcg gcgctggcgg cttcgggatc
      781 gggacgcagc ttccggagcc cccgcgacac ccgccccgag cccgcgttgt aggccgccgc
      841 cgcgaggtag agcgagccga accgctggtt caggtcgcgc aggtggcgca ccgcggcatc
      901 ggtggccttg aacggatcgc gacgctcgtc cacccacgaa tccacccgca ggtcgtaata
      961 cttcgcggtg cccttcatga actgccacat gcccaccgcc ttggcgcggc tggtggcggt
     1021 gttggagaag ccgctctcga tcagcgccag gtataccagg tcgcccggca tcccctcccg
     1081 ggcgagccgt tcccggatca tcggctcgta gcgctgcatg cggttgagcc agatgcccat
     1141 gcgctcgcgg cccttgccct ggaagaagtc gagataccac tgcacccggt ggtggctgtt
     1201 gtaggtctcg acgtcgatgt cccaggtaac cgcctcggcg agggcctcgc tgtcgtcccc
     1261 ggggatggcg gtgtccgccg ccttcgcctc ctcctccgtc ggctcggcat ccgccagcgc
     1321 gtcgagcacg gcctcgtcgg cggcggagtc ggccgccagg tgcagctcgg cggccagctc
     1381 ttcgggggga atcagactgt cgacggaagg cgccggcggg agaggaagcg aatcggcccc
     1441 ggcgtactgc tcggcgctcg ggggcgcggg ttccggcgtg gcgccggcgg acgaggtctg
     1501 ccgggagccg ccacacgcga ccaggagcgc cggcagcagg agagcgggaa ttcgacgcat
     1561 cagcgctccg cttcggagta cattcggggt gcattccgcc gggcggaagg cgttctgagg
     1621 cagtggtgcg gcgcggcgcg ccgcctagcg catgaacaac ctgttaccca ggatccggtt
     1681 ggtggcgttg agcacggcca atgccgccgc gcgcgccggg tcggtctcgg tgaggacgga
     1741 gcccacgacc cgctgatccg agacctcgcc accggtggtc gccaacgaga cgatgacaac
     1801 cgttgcatcg aaggcccgca ccgctttcac gccgagcagc tcgaacgtca tgccgctctg
     1861 ggcgacggcc tggccgaggg cctccacgca ggccagggcg gcgcagcgaa gctcgcccgc
     1921 ctgggaggcc agaccctcgc tctccccgca aaacgcctcc gagtcgcgcc aggtgagccc
     1981 taccttcgcg cggcaccgcc cattgggcag gcggtccagc acgaactcgg cgaagcgcag
     2041 gcgctcgctg agagggttgg gggcagccat ggccgtcctg ggaaggcggg ttcaatgatt
     2101 cagggcgggg atccggaggg gcaaagccta tgccacccct ggcccgccgg ctgtcctcac
     2161 ccgagacgct cggcgagggc ggcggcgagg gcgtcgttgg agagcttatc ggcctgcgcg
     2221 aagagcgcgg ccttggaggc agacgagagc ggataggtca cccataccga ttgaccgtcg
     2281 gcgctcgcgc accgaaagga gaacaccaga ttccattccg ccgaatgcgc gcggcgctcg
     2341 gcggcgaccg acacattcca tcggcggtcg ccgtgctcga ccactctcca taccatggcg
     2401 actccacgaa gtcgaccgga aggtcggcca atatgagata cggccgcgaa tcaggtcaag
     2461 agccgctcgg ccttcgcatc ctcgatcgtg tccacgacgg tgagcggcgg cagctcgtgc
     2521 cacaccacgc ccacgtgggc caggcgcgcg cgcgtctccg ccagcaggcg gtcgctgcgc
     2581 cacggcatcg cggtgaacac gtcgggcagc ggcggcatgc cgccgatcag atagtacccg
     2641 ccgtccaccg tcggtccgat gaccgcctca ccccgctccg caatcgtcgc ggcctcgcgc
     2701 agcagcgcgg cttcgaggcc gggacagtcg cccaccagcg cgagccatgc ccgatccggc
     2761 tcggccgcgc gcgcggctgc gccgagccgg acgccgcgat cgcccgaagc ctggggccgg
     2821 aggtggcagc cctcgccgag ccaatagcgc atctcggggc cggcatcgct gggggcgtac
     2881 cagatggtga tctcgagtcc ggcctcgcgt gccgcggcga gggtgcgggc gaccatgatg
     2941 cggtagagtc ggagcgcgtg gcggtcaccg atctcggccg cgaggcgggg cttgacggtg
     3001 ccgaggcggg gagcgtggag gaagagggcg agcgccgccg cggcgccgga ccgcggcgtg
     3061 ctcagctccg gaccagcgcc tggaagcggg agcgaaggtc gcgggtgacc gatccgggct
     3121 tgccggtgcc gatggtccgg ccgtccacct gacggatcgc gatcacctcg ctggcagtgc
     3181 cggtgaagaa ggcctcgtcc gccgtgtaga cgtcgtagcg gttgagggtg gtctcctgca
     3241 cgtcgtagcc cgcctcccgg cccagctcga tgatggtgtc gcgggtgacg cccttgagga
     3301 tgccggcgta ggccgcgggc gtacggatca cgccgttctt caccacgaag aggttctgtc
     3361 ccgacccttc ggccacgtgg ccctcgctgt cgagcatcag gacttcgtcc gcgccggcgt
     3421 ggatcccttc caccttggcc aggatgtggg cgaggtagtt gagcgacttg acccgcggcg
     3481 agagcgcctc ccggtggggg atcggcgtgc cggcggtcgc cacccggagg ccggtctcgt
     3541 agacctcctc ggggaacagg cggatggtgt ccacgatgat gatgaccgac ggcttggcgc
     3601 acttccgggg atcgaggccg aggtcgccga cgccgcgggt cacgatgtgg cggatgtagg
     3661 cctccgcgat ccccgagcgg cggaccgcct cttcggtcac cgcgaccatc tcgctcatcg
     3721 gcatcggaat cgtgagccag atcgccttgg cggagtcgta cagccggtcg aggtgctcgg
     3781 ccagcttgaa gatcctgccg ccgtagacgc ggatcccctc gaagacgccg tcgccgtaca
     3841 acaggccgtg atcgtagacg gagaccgtgg cggtcttgcg atcgaaccat tcaccgtcga
     3901 gccagacggt gggcgtgcct gcgccggttc ccggcgcgga cttggagggc ttgagagtgg
     3961 ctgacatgtg ggcaatgtac cccgtggggc cggagcggcc aagacgtgcc cactggtccg
     4021 ggagcgccac cctggcgagt ttttagcatg cgaccgaatc gctggagcga gccgcagctg
     4081 gatcggcgga cctatccccg tgccgagtac cggcgtaccg cgcccgcgct gctcgagctc
     4141 gagagctacc gctgcgcggt gcgagacctt gcacccggcg gcctgcggat cgagccggcg
     4201 ccggccggcc gggtctggga gatcggcgag cgggtgggcg gcgtcctcca cctgaggacg
     4261 gtgggccagg tgctgatcga cgccatcatc gggcgtatcg accgcgccgg tctggccctc
     4321 gtgcccgacg ccggcgcctg gccggagccc cccatcatcg acgccgagcg gtccgcgctg
     4381 gtccgctggc atcacgagcg ccgcagtgct ccgcgcctcc cgctgcccca gcttccgggc
     4441 cgcggcggta ccccgctccg cgacgtgagc gccaccggcc tccgctatgc cctcgcgccc
     4501 agcgagcgcg cacccggtac cggaagccac gtcgcgggcg agctccggct cgatgccgag
     4561 acggtgatcc ccgtccgggg acaggtgatc cggcacgtcg gccgggagat cgcggtggcg
     4621 ctcgatccgc ccggcctcac ccccgagatc ctggcgctgc tgcggcggcg gttcttcccc
     4681 gagggagtgg acctgcccag gtgatggcgt cgctgtcacc ctgagcgaag cgaagggggg
     4741 ccatgcccga aatggtcccc ttcactgcgt tcagggggac accggaggca ccgccgccag
     4801 cagctccgcg atctcctcca gcggcagcac caggctcgca cccccgcgtc gcaccgccgc
     4861 gcgcggcatc ccgtacacga cgcagctcgc ctcgctctcc gcgatggtga cgccgccgcc
     4921 cgcgcggatc gtcgccatgc cgtccgcccc gtcctcgccc atcccggtga gcaggatgcc
     4981 gagcacccgc ccaggcctcg agcgcgccgc cgagcgcatg gccacgtcga tgctcgggat
     5041 gtgccgggcc tcggcgggct ccgcggtcag cacgaccgcg agcccggagc tcacccgcag
     5101 gtgtcgcccg cccggggcga ccgcgacctg ccccggcagg aggcgcatgc cttccaccgc
     5161 ttcgcgcacc cggagccggc tcagcgagtc cagccgcttg gcgaacgcct cggtgaaccc
     5221 cggcggcatg tgctgcacca caacgatcgg gaccggaaac cgggccggca gccgctccag
     5281 gatccgctgg acggcgggtg gtccgccggt ggaggcgccg atcaggcaga ggtcgcagtc
     5341 gcgaagctcg ccgagggttc cctggtccgg gaccgctcgc gcgtcggttc cgttggtgcg
     5401 caccggcgcc ggccgcgggg ccagcgcctg catccggtcc accacctctc gccgcaggaa
     5461 ctccaggtcc atcacgttga aggtgctctt gtcgatgaag tccaccgcgc ccgcggcgag
     5521 cgccgacacg gtggcggcgg ctccctcccg ggtgtgcgcg gagagcatca ccacccgcag
     5581 cgagggcttc caccgcagca gcgccggcag cacctggaga ccgtccatcc ccggcatgtc
     5641 cacgtcgagg gtgacgaagt cgggatccgc cgccggcacc ttggccagcg cctccgcccc
     5701 cgactccgcc gcgccgacca ccttgaagcc gggctgggcc gcgagcacgc gggccagcgc
     5761 gcgccggacg aaggccgagt cgtccacgat gaagacgcgg atcatcccgg tggcttccgg
     5821 tagacgaccg agccggccac cacgaccgac gtgaggtcgg tgctgcggtc gaagagcgac
     5881 tcggagtggc cgaggaagag gtagccgcca ggcatgagcg cccggccgag gaggccgatg
     5941 agccgatcga atgccgcgtc gcagaaatag atcagcaggt tccggcacag gaccgcgtcg
     6001 tacgcgctcc gctccagcgc gaaccccggc gccagcaggt tcgcctggaa gaagcggatg
     6061 ccggcgcggt accgctcccg cacccggaac cgctcgccct cctgggtgaa ataccggcgc
     6121 cgcgtctccg ggtcgcaggc gcggagcgac ccctcctcgt acacggcctc cctggcccgc
     6181 gcgatccggt cggcgttcag gtcgcacgcg tcgagctccc agacccgtcc gggcaggtga
     6241 cccgcgccct ggagggccat gcccacggag tacggctctt cccccgagct gcagcccgcg
     6301 gagaggatcc gcaggggccg tcccggcgcg gcggcgcggc gctcgggcag gacgtggccg
     6361 accagaatgt cgaactggcg ggtctcgcgg aagaagtagg tctcgttgtt ggtgaccaga
     6421 gcggggagcc ggtcgaactc ggcatcgcgc aggggatgaa agcggaggta ctcgtagtaa
     6481 gcgcgcggcg aatcgaggtg cagctcgcgc aggcggggac cgagccgggc ggcgaggatc
     6541 tcccgacgca cgccgtcgaa ggtgagaccg aatcgctcct ggatcaggtc gcccaggagc
     6601 ttgaggtcgg ccgcgggaaa cgcggtcacg ccgcgctgga caccgcgtcg tgcggctgct
     6661 ccagcgcggc ccgggccgcg gccgccacca ccgattcgac gtcgcgggcg agggtgagca
     6721 gcaccgcgcg gttctcctcc gtccgcagcc ggccaaggcc gcgggccgcg gagtggcgga
     6781 tgtcccagtc ggggtcgtcg gcgaaggccc gcagcaccgg catgtgctcg aatcccgccg
     6841 tctccgcgag tccctgcgcg gccgcgcggc gcatgtcgag gtccggcgac tccagccgct
     6901 cgagcaggaa ctccggcagc cacaccggcg cgatccgcag cagcgaggac acgatctgga
     6961 gctgctcgtg cggcccgcac tgggggaaca ggtcccggag ccgcacggcc gccgcctgcg
     7021 cgcggcactg gccgagcgcg cggatcacgt ggaagcgaag cgagtccgcg gtgcccagca
     7081 tcgccaccag cgtcgccacc gacttctcgc cgccccggcg caccatgagc tccagcgcct
     7141 cggcctgaat cggcgtgtgg cggtccgcca gggcccgcag cagcgcgatc tcgggtctcg
     7201 atccgggagc gcgggaggcg gcccggagcg cggccagacg gatgccgggg ctgggcgatt
     7261 ccgtgagctg gagaacacgg gtctccagca ggggcacggg cgtccgggcc agcacgccca
     7321 gcgcctccag cacgatcggc tcggccacgc ccggctcgag gcaggcgtcg agctccgtca
     7381 gcgcttcggg tgagagtcgc gcgaggccct gggcggcggc ggactgctcc ggcggctccc
     7441 cgttccggag ccgctccatc agcagcggag cgaccgcgtc gatgcccatg cgcccgagcg
     7501 ccaggcaagc ggcggtgcgc accgggagat gggagtcgcc cagatggctc accaccgcgg
     7561 acaggtcggc gggcgcgaag gtgcccaccc ggagggcgcc gcagcggacg tcggcgtcgg
     7621 ggtgccggag cagcgcgggg agccggggcg cgatccggtc ggcgaagcgg ccgaacagcg
     7681 cctcgatcca ctgcgccatc gcgtcacgcg cgagccgggc gagcagcacc ggctgcagct
     7741 cggccaggcc ggcggccgcg accagcgtgg ccgcggcgcg cagcaggctg tcggcctcgt
     7801 cgtcgtcgga tgcgccggag ggcgtctcca gcagctgcgc gaggtagccg acgaggttcc
     7861 cgccgtccac cacgatgtcg cgctccagcc gccgcaggag cggctcgggg gccgggtgca
     7921 gctcgatcac caccgcgacg gcgaggagca gcggatcccg gagggaccgc tcccgcaccg
     7981 agagcagcag tggcaagagc ggctccagcg actcgggcgc cgcgatccgt cggagcgcct
     8041 gcacggcggg ctccgccagg atcgagtccg gcacgaacgc caggagcggg cccaccgcgt
     8101 cggggtggcc gatttccccc agcgccgcga tggccccgag ctggagccag aggtcgcgct
     8161 ggagcagccc gcagagcgcc ggcaccgcct cgcccacccg gagccggccg gccgcctcga
     8221 tcgccgccag ggccacgttg ggatcgggat ggtcgagcag cggagggatg gcggggccgg
     8281 ccgcggcgaa gccgatgcgg gaaaggctct ggagcgcgaa gagcaccagc tcggggtcct
     8341 gcccccgcag catgtccagg aggtgtggca ccgcgtaggg cccctggcgc tcgagggcgc
     8401 tgagccccgc gttccgccgg accgcgttct cgccgtccgc cgccagctcg ccgaggatgg
     8461 acggctcgac gtagcgggcc gcgagccgga tggcgcgctc gcgcaccgtg ggcgccacgt
     8521 cctccagtgc ggcgagaatg gcaccctcgc cgtccggctc gcgggcggcc gcttccagcg
     8581 ccgcgatccg ctgcgccggc gagagctggg cggagctcat acctggagca gtgccacgcg
     8641 ctgccgcagg gcgtcggact cgcccgccag gctcttcgcc gccccgctca tctgctcgac
     8701 cgccaccagg ttctgccgcg acacgaccgc gatcgcctcc accgccttca ccaccatctc
     8761 gccgccgtgc ttctgctcgg tgaccgcctc cgacatctgg tgggtgagct ggttcatctt
     8821 ctgcgccgcg gcactgatct cctgcgcgcc ggcggcgttc tccgagatcg agctggcgat
     8881 ctgccgggcg agggcggaca tccggcccac cgtggcgagc acctcgcggg cgtcggccgc
     8941 ctgctcgtcc gccgctcccg cagcctcggc cacgaggccg gaggtcttgt tgatggactc
     9001 catgatcccg gcgaggacgt gctcgatgag ggtcacggcg cgcttggtgt ctttctgcac
     9061 cgtctcgatc accccaccga tctcctgggt cgcgctcacc gagcgctcgg ccaggcggcg
     9121 gacctcgtcg gccaccacgg cgaacccctt gccggcctcg cccgcccggg cggcctcgat
     9181 ggccgcgttc agcgccagca ggttggtctg gtcggcgatg ccctcgatca ccttcacgat
     9241 cttgccgatc tcgtcggacc gctggccgat ggaggagatc gactcctgga gccgctcgcc
     9301 gttgtcgcgg gtgtcggcga ccgactgctg actgacctgg tccacctggt gaatgcgggt
     9361 cgcgatcgcg cccacgttct cgatcatggt cccgagcgtg gcggtggcct cctccacggc
     9421 gcggatgagc acctccccgt tctccgaggt ctgggtgagc gtggcactca tctcctgaat
     9481 ggacgcggag gtctggtcca cgttcgcggc cagcgcctcg gcgctgcggg cgaggttctg
     9541 catctgcgag gcgatctcga ccatggtcga ggaggtttcc tcggtcgagc tggactgcat
     9601 ctccgcgccc ttcgccatct gggtcgagga ggcggagatc tcctcggccg actgggccac
     9661 ggcgcgggac gtgaccgcga tctgggtggc gatctcccgc aggttcttca ccatctgccg
     9721 catcgagtgc tccagccatc cgatctcgtc ccgcgactgg ctccggatgt cggtggtgag
     9781 gtcgcccttg gagacctgct ccgccagcac gccgagctgg gtgagcgggt cggcgatcag
     9841 acgggcgagg ccgagggcga gcacgacacc gcccgcgatc gtcaccacga ggaacaggag
     9901 gatggccgcc cgggaatcct ggaagatctg ctccgcggcc cgcacgtcgt tccccaccgc
     9961 gttgagccgg tcgagggccc ggatggcctg ccatccgagc gccgccgtca gggcgagcac
    10021 caccgcgaat ccggtgagga tcttcctgcg gatcgtccag tccttgatcg tctgctgcca
    10081 ggccttggcc atgtcacgca tccttgagta gggcttcatt tgtcaccctg agcgcagcga
    10141 aggggaccat gcgggcatgg cctccctcgc tccgctcggg atgacagcat cacgcgttca
    10201 ggagcagcac cttgtcgaga tcgagcagca tgatgagccg ggagttccag cgcgcgaccc
    10261 cggtgaggaa gtcggtctcg gccgtcacca cttcctcggg cggtggtgcc acgctgtcca
    10321 ccggcacctt ggtcacctgc gacacccggt ccaccagcag gcccagggcg cggcccatga
    10381 cttccaccac cacgatccgc gacgtcgggg tgacggtcgc gggggtgagg ccgagccggg
    10441 tccggatctc caccacggcg aggatccggc cgcggaggtt ggtgacgccg cggacgtgcg
    10501 ggggcacctg cggcacccgg gtgatcccgt ccacccggat cacctcgcgc acctgggtga
    10561 ccgggatgcc gaactcctcg cggtcgagcg tgaaggtcag gagatggagc atggcggccg
    10621 gcgcggccgc atcgttcgcc gccgccggca gcgaatccgc gaagcccagc agaggctcgg
    10681 cggttgcccg cgcgtcagtt ggcatgagcg gttccctcga ggatgcggac cacgtcgagg
    10741 atgcaggcga cccgcccatc ccccaggatg gtggtgcccg agaccacggc cggccggccc
    10801 agggccggat ccagcccctt caccacgatg tcctggtgcc cgatcaggcg gtccaccagc
    10861 aacccgcggc gcctggcgcc cgcggtcatg acgacgtaga agggacgccg gccccgagac
    10921 gactccgggg tgccgagcac ggcccccgcg tcggccacgt gaatcaggtc tccgcgccat
    10981 tgcgtgaccc cctggtggtt gatctggcgg atcgcctccg gctccgcccg caccgtctcc
    11041 gccacgtggg agagcgggac cgcatagcgc tcccggtcca cctccacgat gagggagcgc
    11101 acgatggcga gcgtgaccgg caggctcagc gtgaaagcgg tcccctgccc cctccggctc
    11161 tccacctcga tcgtgccgcc gagcgcgtgg atgacgttcg cggcgacgtc gaggcccaga
    11221 ccgcggcccg agagcgtcgt cacccgctcc gcggtggaga ggccggagac gaacacgagg
    11281 ttgtggagct gcgatgcgtc cgcagtgcgg acgtcgagtc cgagcgactc ggccctggcg
    11341 cggatggcat cctcgtcgag cccccggcca tcgtcgctca cccggatggc cacgcgtccc
    11401 gacacggctg cggcccgaag gcggatgacg ccctccgccg gcttcccggc gcgggtgcgg
    11461 tcctcggacc gttccaggcc gtgggccacg gcgttgctca ccaggtgcag cagcggctcg
    11521 ctcaggcggt cgagcaccgc cttgtccagg gtggtctcgc cgccgctcac ctccagcctg
    11581 accttcttcc cttccgcgtg ggcgacgtcc cgcaccaggc gggggaagcg gctcagcacc
    11641 gtggagaccg gcagcagccg ggcctccatc agcgtggact cgagccgggt gagggtcttc
    11701 tgcagcgcca gcaccgactg atccagctcc tcgatctccc ggcacgcgcc caccttgcgc
    11761 gtcaggcggc ggtacaggtc caccagcgac gagtgctgga tcaggccttc gccgagcacc
    11821 tcgagcatcg cgtcgagccg gcggaagtcg atccggacga cgttccccgc cgcgtccccc
    11881 tcctcgctgc gcgggccgcg acgctccgcg tgccggcgat cgctgtgcgc cgccgcggcg
    11941 ccgggggccg ccgccaggaa gcctcggacc cgctccacga aggcggccgc gggcgcggga
    12001 tcggcctcgg gcgaggcggc gccgaccatg tccaccagga ggccgccgcc cgcgaccagc
    12061 agcgcggccg ccgcctcggt gcgggcctcg ggcgcgcgac ccaggaaccc gcaggcgtcc
    12121 tccagcgcgt gggcgacgtc gcgcaccgga ttgagcccca tcatcgcgga gttgcccttg
    12181 atggtgtgga ggcgcccctt cacggtcgtg agcaggtcgt cgccggggtg gccgtcgcgc
    12241 cagcgccgct ccagctgcac gaacgcatcc cccacctgct ccgccagggg caggcactcc
    12301 acgatgtagt cctggagcag atccccgaac gcgttctcgc cggcgatcat gccgctcccc
    12361 ggctgcgcct gagctcgcgg gcgcgtcgca ccagcgcctg gatgtccgac ggctgaaagg
    12421 gcttgcggag gtagtcccag gcgccgactg cccggccgcg cgcctcgtcc tcctcgctgc
    12481 cctcggtggt gaccagagcg acgggcacgt ggggatggag gtgctccgcc tgccggcggg
    12541 ccagcacctc gagcccgttc atctccggca tgttgaggtc gagcagcacc agggtgagct
    12601 cggggtgctg agccagcagg gcgtatccct cgcgcccgtt cgcggcgtag tgcaccgtgc
    12661 tcccggcgag gtcgccctgg gagaagatca gccggtacat ctggtggagg agcttcgagt
    12721 cgtcgatgac tagaaaggat tcgggcatga gttaccctgt cggggaatcg atgaccttct
    12781 gcaccacgct gcggagggac tggggagacc acggcttctt gacgatcgcg gccacgccca
    12841 gcgatgccgc ctgcgccacc aggtccgagt cgtccgcctc ggcggtggtc acgatgacgg
    12901 gcgttcgccc gtgcaccggc tgccgccgga gcgcgcggag aaactcgacg ccgtccatgt
    12961 cgggcatccg gaggtcgagc agcacggcgt cgaacggctc ggtcgagcgg tcgagcagct
    13021 ccatcgcctc gcggccgttc tcggccggtt tcag
//
LOCUS       DASUYN010000198         2471 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1386739, whole genome shotgun sequence.
ACCESSION   DASUYN010000198 DASUYN010000000
VERSION     DASUYN010000198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2471)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2471)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2471
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1386739"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1676
                     /locus_tag="VF061_03935"
     CDS             <1..1676
                     /locus_tag="VF061_03935"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF013206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEX6668681.1"
                     /translation="NAVDAACAMLAAVTTMWDVLSWGGETQALIYHPKLRKVLGINAL
                     GVAPSGATAEYYRSRGYRYPPEYGPLAAVTPGTPGGLLTMLAEYGTLSLEQVLAPAIQ
                     MADGYPIEAQTANAIERHRERIKQWRYSREVYLPHAGADREAPEPGEIFRQPDLAATL
                     RKLVAAERAALQAGRSRKEAIGAAYDRFYRGDIARELVRGVREEGGLITLEDLARWRV
                     RIEEPVSTGYKGITVYKLPFWQQGPALLQALNILEQADLKRMGYNSPAYIHALYQAMS
                     LAFADRDFYYGDPYFPPEEPVRGLLSKEYARARFAVIDWHRNDPSVKPGDPYPYQGGT
                     NPFAELLGKWTVEPAPDTLERSGQQDDLSDAGTTSIQAADSAGWAVSITPSGGWVPAV
                     IAGRTGVGLSQRAQSFVTRAEDGPYNVIAPGKRPRVTLTPTLALRDGLPFLSFAVQGG
                     DSQDQNLLQFFLNIVEFGMTPQQAAEAPNINSGQMRSSFGAHEARPGLLLIAASTPDS
                     VRGELERKGYTLEVEERTSGPINAILFDRAHGTMWGASSNHGEDHGVAW"
     gene            1769..>2471
                     /locus_tag="VF061_03940"
     CDS             1769..>2471
                     /locus_tag="VF061_03940"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX6668682.1"
                     /translation="MTVLERLRTALAPGIAVEREIAHGGMGIVLLGRDMLLDRTIAIK
                     VLRPELVTAVSAERFLREARHAAALRHPNVVRVHHADEADGLHYYTMDYIAGETLASR
                     LAGGRLPAREAVRVGLNLLAALAAAHRHKLIHRDVKPSNIFLTPGSALLGDFGVAHAL
                     DSSSTALTQPGSPVGTLAYISPEQLRDQPVTERTDIYAVGLVLYEAITGTRWQPLADP
                     ARGDWSALPRHLRGPI"
BASE COUNT          377 a          915 c          837 g          342 t
ORIGIN      
        1 gcaacgcggt ggacgcggcc tgcgccatgc tcgccgcagt cacgacgatg tgggacgtgc
       61 tctcctgggg cggcgagacc caggcgctga tctaccaccc caagctcagg aaggtcctcg
      121 gcatcaacgc cctcggcgtc gcaccctcgg gcgccaccgc cgagtactac cgctcgcgcg
      181 gctaccggta cccgcccgag tacggaccgc tcgcggcggt gacgcccggc acgccgggcg
      241 gactcctgac catgctcgcc gagtacggca cgctgtcgct ggaacaggtg ctcgcgccgg
      301 cgatccagat ggcggacggc tacccgatcg aggcccagac cgccaacgcg atcgagcggc
      361 accgggagcg gatcaagcag tggcgctatt cccgcgaggt ctacctgccc cacgccgggg
      421 ccgatcgcga ggcgcccgag ccgggcgaga tcttccggca gcccgatcta gccgccacgc
      481 tgcggaagct cgtggccgca gagcgggccg ctctgcaggc ggggcggagc cggaaggagg
      541 ccattggcgc cgcctacgac cggttctacc gcggcgacat cgcccgcgag ctggtgcgcg
      601 gcgtgcgcga ggagggaggc ctcatcacgc tggaggacct ggcgcgctgg cgggtgcgga
      661 tcgaggagcc ggtcagcacc ggctacaagg gcatcaccgt ctacaagctg cccttctggc
      721 aacagggccc cgccctgctc caggcgctca acattctgga gcaggcggac ctgaagcgga
      781 tgggctacaa ctcgcccgcc tacatccacg cgctctacca ggcgatgagc ctcgcgttcg
      841 ccgaccgcga cttctactac ggcgatccct acttcccgcc ggaggagccg gtccggggac
      901 tgctctcgaa ggagtacgcc cgggcgcggt tcgcggtgat cgactggcac cggaacgatc
      961 cgtcggtgaa gccgggcgat ccctatccct accagggcgg caccaaccct ttcgcggagc
     1021 tgctcgggaa gtggacggtg gagcccgccc ccgacacgct ggagcggagc gggcagcagg
     1081 acgacctctc cgacgcgggc acgacctcga tccaggcggc ggactcggcc gggtgggccg
     1141 tctccatcac gccgagcggc gggtgggtgc cggcggtgat cgcgggacgc accggcgtcg
     1201 ggctgagcca gcgggcgcag agcttcgtca cccgagcgga ggacgggccc tacaatgtga
     1261 tcgcgccggg caagcgtccc cgggtgacgc tcacgcccac gctcgcgctc cgcgatggcc
     1321 tgccgttcct gtccttcgcc gtgcagggcg gcgactcgca ggaccagaac ctgctgcagt
     1381 tcttcctcaa catcgtggag ttcgggatga cgccgcagca ggcggccgag gcgccgaaca
     1441 tcaacagcgg gcagatgcgc tcgtccttcg gcgcgcacga ggcgcgtccc gggttgctcc
     1501 tgatcgccgc ctccacgccc gacagcgtgc gcggggagct ggagcgcaag ggctacacgc
     1561 tggaggtcga ggagcgcacc tcgggaccca tcaacgcgat cctgttcgac cgggcgcacg
     1621 gcacgatgtg gggagcgtcc agcaaccacg gggaggacca cggcgtggcc tggtagccca
     1681 cgccgggcca tttgcacttt cccggtccgc gacgcattct catagcattc ctctcaggac
     1741 agccagcgcc gagacgagcc tgccgacgat gacggtgctc gaacgtctgc gtaccgcgct
     1801 cgctcccggc atcgctgtgg agcgggagat cgcgcacggt gggatgggta tcgtcctgct
     1861 gggccgcgac atgctgctcg atcgcaccat cgccatcaag gtgctgcggc ccgagctggt
     1921 cacggccgtc tccgccgagc gcttcctccg cgaggcccgg cacgccgccg ccctgcgcca
     1981 tcccaatgtc gtccgggtgc atcacgcgga cgaggccgac ggacttcact actacacgat
     2041 ggactacatc gccggcgaga cgcttgcctc gcggctggct ggcgggaggc tgcccgcccg
     2101 ggaggcggtc cgcgtgggcc tgaacctcct cgccgctctg gccgcagcgc accgccacaa
     2161 gctgatccac cgcgacgtca agccgtccaa catcttcctc accccgggca gcgcgctgct
     2221 gggcgacttc ggcgtggctc acgccttgga ctccagctcc accgcgctca cccagcccgg
     2281 gagtcccgtc ggcaccctcg cctacatctc ccccgagcag ctccgggacc aacccgtcac
     2341 cgagcggacc gacatctacg ccgtggggct ggtgctctac gaggcgatca ccggcactcg
     2401 ctggcagccc ctcgccgatc ccgcccgtgg agactggtcc gccctgccgc gtcacctgcg
     2461 cggccccatc c
//
LOCUS       DASUYN010000199         8098 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1607436, whole genome shotgun sequence.
ACCESSION   DASUYN010000199 DASUYN010000000
VERSION     DASUYN010000199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8098)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8098)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8098
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1607436"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2359
                     /locus_tag="VF061_03945"
     CDS             <1..2359
                     /locus_tag="VF061_03945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668683.1"
                     /translation="PLEAPVLDLDAYAGGLKATRRGGGEQTKSLRFDGADGKEYQFRS
                     IDKDPVAALPPALRTTAAAGIVRDQTSAGHPVGSLLVPPLLEAAGIPHAAPRVFILPK
                     DHPRLGEFAAEYGGMLGTIEERPTDEEGASFEGAAEVISTTKLLKELEASPNDRVDAT
                     AFLTARLVDVLVGDWDRHQDQWRWARFDDSRPYRWVPIPRDRDQAFARYDGLLLAVAR
                     ASAPQLVNFGPDYAGMLGQTWNGRDLDRWLLVPLDRADWDSMATALQARLTDSVIEAA
                     AGRLPPSYIPLDSVRLADALKSRRDELPEAARDYYRHLAGEVEVHGTDREELATVDRL
                     DDRFTEISLAVMGDNGEPEEPYFTRRFDHDETKEVRLILHGGGDRVQVRGEGGGGVRV
                     RILPGKGTDAVVDSSGGGRIHLYTDEAADSVLPGRDVEVDRQPYAPPDTAVRDWGDRW
                     LSVTWLAAGPDIGIFGGTGVSFTRYGFHRDPFAERYRLRAGWSTGANTGRADFNATWI
                     PENSRIRARLLARASGIEVLRFHGFGNEVPAEGDDEFFRAEQVDLTLAPSIGFPLGRA
                     EFRAGPVLRYSDTDFDEDRFLTPDVYGAGKFGMLGLASQLSLGALDRPLGAARGVSLS
                     VDGSWYPAAIDVEDAFGELHANVSGFVSALGAPLEPTLALHLGGKRVWGRFPFQEAAY
                     IGDAATVRLGRQNRYAGEASLYAQSELRLFLTKFYFLAPADFGVLGLADVGRVFLDGE
                     DSDRWHAAGGGGVWASFLDRAYMVRLSLAASSERTAVYLGIGRGF"
     gene            complement(2386..3774)
                     /locus_tag="VF061_03950"
     CDS             complement(2386..3774)
                     /locus_tag="VF061_03950"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HEX6668684.1"
                     /translation="MTIWSPTLLPGAEPKYQALLDALLRDVEAGTLPPGTRLPPQREL
                     ADRLRVAIGTVGRAYAEAEQRGVVSGEVGRGTFVRGPEPGLESGAVDDGDAEVIDLSK
                     SRLVRDPRVGTVAAMLQSLARRSDLDRLMDYYQPAPGMARHREIGARWVGRSGLSVPA
                     ERVIITSGAQHGAATVLASLAKPGDLILTEHVTYTGMKAIASLLHLQLRGLPLDGDGL
                     IPEAFEAACREGAPRALYCMPTLHNPTGRTMPLGRRRALVDIATRYDVPLVEDDVYGF
                     LPDQPIPPLTALAPAHAYYITSTSKSMAPGLRVGYVVAPEARVDRVAAVIRASTWLVA
                     PLLAELASDWIERGEADAMVAWKREETAARHAAAVRILGRWLPDAPPRSFHLWLPLPE
                     PWRTEEFVSQARALKVVVSPSEEFVVGRESAPHAVRVCLGATSSRARLEQGLKRLAEL
                     LEEGPEPSLSGY"
     gene            3850..4842
                     /locus_tag="VF061_03955"
     CDS             3850..4842
                     /locus_tag="VF061_03955"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEX6668685.1"
                     /translation="MRTTPLPAPPASAPPWRRPRLRVSAPSPAAVAANAGGAGVKAAV
                     AFVGLCVIWGSTWLAIKVGLRDLPPISFAGIRFALAALILLVIVSVRGLRLPWAARDW
                     RLLLWTGLLSITVNYALVFWAELHISSGLAAVLNATIPLFGLPLAHRVLAAEPMTPHK
                     VGGVVLGVLGMAIVFGAELGGNTPMAAWASAGVLVASLAGAQAGILVKARGTHLDPAV
                     LAGVQMTFGSVPLLLGGTLLEGNPLQLAWTPSALLSLGYLTVVGSVVAFLAYYWLIRQ
                     IDVTRVLLIPLITPLVALGLGSVFLGEDVGWGTAVGGGAILGGVALAVWNGGRR"
     gene            complement(4885..5826)
                     /locus_tag="VF061_03960"
     CDS             complement(4885..5826)
                     /locus_tag="VF061_03960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668686.1"
                     /translation="MDRMDEEALRRELDGVASTDLVYVVKEGGQEVVGLSKTGVDECC
                     MALVSQGQVIREENLQYELLGEGEEREALFKVKAARFAVSPAGQEVRLDQVIGVKRQP
                     LYYEPAQLDLDSRVPSRKYRGKTYRELLTTAEGRDYLAWMAENFAETEIREFARRILA
                     GEDVVSRRGRQLNPHWYEAGAMKAARNARFRLIPGNIRAQVIASARQSGLARVLEGAT
                     ASAAAPAAASPTAPVPVPAVERTESVSRVGPYAPTEKQVAFYQRLAESPVFSEEERRR
                     ALEWLATKATRQTIKDQIDWLKRQVETRRASRAESAA"
     gene            complement(6180..6362)
                     /locus_tag="VF061_03965"
     CDS             complement(6180..6362)
                     /locus_tag="VF061_03965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668687.1"
                     /translation="MSQHDGRPWEGEGDLPWDTPDAEWEPAEAEAWRGDLHLDDWPES
                     MAGPEYWLYKNQSDDE"
     gene            6640..6713
                     /locus_tag="VF061_03970"
     tRNA            6640..6713
                     /locus_tag="VF061_03970"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6674..6676,aa:Pro,seq:ggg)
     gene            6797..7249
                     /locus_tag="VF061_03975"
     CDS             6797..7249
                     /locus_tag="VF061_03975"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012478.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEX6668688.1"
                     /translation="MRGSAVALFALILSACGGSGDDGRAAGGAGDFAIDSAALTRTGS
                     GLQYQDVTVGSGPEAREGQVAVVHYTGWLTDGTKFDSSRDRNAPFSFPLGAGQVIRGW
                     DEGVAGMKVGGRRKLLIPASLGYGDMGAPPVIPPGATLVFDVELLDLK"
     gene            7397..8068
                     /locus_tag="VF061_03980"
     CDS             7397..8068
                     /locus_tag="VF061_03980"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEX6668689.1"
                     /translation="MFTRHGRRTVLAVGALAMVVGLAGCAAKVKQEDFNNEMAKLRQE
                     MQAGDQAVATRLDSTNQAVAEQRARLDALEQELQAFRSEYTVSIEKVRGMLKFNVPVH
                     FEFASSELREADRPVLDRFASVVTEYYPGALVTVEGFTDPSGSAAYNMQLGKRRAEAV
                     QEYLATSGGLTADHLKAVSYGESRNRQVVPGAKGPGELGVENRRVALVIDHAAVATDE
                     VALGD"
BASE COUNT         1152 a         2840 c         2820 g         1286 t
ORIGIN      
        1 tcccctcgag gcgccggtgc tcgacctcga cgcctacgcc ggcgggctca aggccacgcg
       61 aaggggtggc ggcgagcaga ccaagtcact gcggttcgac ggcgcggacg ggaaggagta
      121 tcagttccgc tcgatcgaca aggatccggt ggcggcgctg cccccggcgc tgcgcaccac
      181 ggccgcggcc ggcatcgtgc gggaccagac cagcgccggg catccggtgg gctcgctgct
      241 cgtgccgccg ctcctggaag cggccggcat tccccacgcc gcgccccggg tgttcatcct
      301 cccgaaggat cacccccggc tgggagagtt cgcggcggag tacggcggga tgctcggcac
      361 catcgaggag cgacccaccg acgaggaggg cgcgtccttc gaaggggcgg ccgaggtcat
      421 cagcacgacc aagctgctga aggagctcga ggccagcccc aacgatcggg tcgacgcgac
      481 cgccttcctc accgcgcggc tggtggacgt gctggtgggc gactgggacc ggcaccagga
      541 ccagtggcgc tgggcgcgct tcgacgactc ccgtccctac cgctgggtgc ccatcccgcg
      601 cgaccgggac caggcattcg cccgctacga cgggctgctg ctcgcggtcg cgcgggcgag
      661 cgcaccccag ctggtcaact tcggccccga ctacgccggc atgctgggcc agacctggaa
      721 cggccgcgac ctcgatcgct ggctgctggt gccgctggac cgcgccgact gggactcgat
      781 ggcgaccgcg ctccaggccc ggctcaccga ctcggtgatc gaggcggccg cggggcggct
      841 cccaccgagc tacatcccgc tcgactcggt gcgtctggcg gacgcgctca agtcccgtcg
      901 cgacgagctg cccgaggcgg cgcgtgacta ctaccggcat ctcgcgggcg aggtcgaggt
      961 gcacggcacc gatcgcgagg agctcgcgac cgtcgaccgg ctggacgatc gcttcaccga
     1021 gatttcgctc gccgtgatgg gggacaatgg cgagccggag gagccgtact tcacccgccg
     1081 cttcgaccac gacgagacca aggaagtccg tctgatcctg cacggcgggg gggaccgggt
     1141 gcaggtacga ggcgagggcg gaggcggcgt ccgggtccgg atccttcccg gaaaggggac
     1201 cgacgcggtg gtggactcct ccggcggcgg ccgcattcac ctgtacaccg acgaggcggc
     1261 ggactcggtc ctgccgggcc gcgatgtcga ggtggatcgg caaccctacg cgccgccgga
     1321 tacggcggtg cgcgactggg gcgaccgctg gctctcggtg acctggctgg ccgcgggtcc
     1381 ggacatcggc atcttcggtg gcaccggtgt ctccttcacc cgctacggct tccatcgcga
     1441 tcccttcgcc gagcgttacc gcctgcgggc cggttggtcc accggcgcca acacgggccg
     1501 cgccgacttc aacgccacct ggattccgga aaactcgagg atccgcgccc gactcctcgc
     1561 ccgcgcgtcc gggatcgagg tgctgcgatt ccacggcttc gggaacgagg tgccggccga
     1621 gggtgacgac gagttcttcc gggccgagca ggtagacctg accctggcgc cgtccatcgg
     1681 ctttccgctg ggacgcgccg agttcagagc cggaccggtg ctgcgctact cggacacgga
     1741 cttcgacgag gaccgctttc tcacgccgga tgtctacggc gcgggaaagt tcgggatgct
     1801 cggactcgcg agccagctca gtctgggggc cctggaccgc cccctcggcg ccgcgcgcgg
     1861 cgtatcgctc agcgtggacg gttcctggta tccggccgcg atcgacgtgg aggacgcctt
     1921 cggcgagctg cacgccaacg tcagcgggtt cgtgagcgca ctcggcgcgc cgctggagcc
     1981 caccctggcg ctgcacctcg gcggcaagcg ggtgtggggg cgcttcccct tccaggaggc
     2041 cgcgtacatc ggcgacgccg ccaccgtccg cctcggccgg cagaaccgct atgccggaga
     2101 ggcttcgctc tacgcgcaga gcgagctgcg gttgttcctc accaagttct acttcctggc
     2161 gccggcggac ttcggtgtgc tggggctggc ggacgtcggt cgggtcttcc tcgacggcga
     2221 ggactccgac cgctggcacg cggcgggcgg cggcggggtg tgggcctcgt tcctcgatcg
     2281 ggcctacatg gtcagactgt ccctggccgc gagcagcgag cggacggcgg tgtatctggg
     2341 aatcgggaga gggttctagg gggaggacgc gggggtggcc ctcgcctagt atcccgagag
     2401 actcggctcc ggcccctcct ccagcagctc cgccagtcgc ttcagccctt gctccagtcg
     2461 cgcccgcgac gaggtcgcgc ccaggcagac gcgcacggcg tggggtgcgc tctcgcggcc
     2521 gaccacgaac tcctcggacg ggctcaccac caccttcagc gcgcgtgcct gggagacgaa
     2581 ctcctcggtg cgccacggct ccggcagcgg cagccaaagg tggaagctcc gcggcggcgc
     2641 atcgggcagc catcggccca ggatccggac cgccgccgcg tgccgcgccg ccgtctcctc
     2701 ccgcttccac gccaccatgg cgtccgcctc gccgcgctcg atccagtcgc tcgcgagctc
     2761 cgcgaggagg ggtgcaacga gccaggtgct ggcccggatc acggccgcga cgcggtccac
     2821 ccgcgcctcc ggcgccacca cgtaccccac ccgcagtccc ggcgccatgc tcttcgaggt
     2881 gctggtgatg tagtaggcgt gggccggcgc cagggcggtg agcggaggga tcggctggtc
     2941 gggcaggaag ccgtagacgt cgtcctcgac cagcggtacg tcgtagcgcg tcgcgatgtc
     3001 gacgagcgcc cggcgccggc cgagcggcat ggtgcggccg gtgggattgt gcagcgtggg
     3061 catgcagtag agcgcccgcg gggcgccttc ccggcaggcg gcctcgaagg cctccggaat
     3121 cagaccgtcc ccgtccagcg gaagaccccg cagctggagg tgcaggaggc tcgcgatggc
     3181 cttcatgccg gtgtaggtga cgtgctccgt gaggatgaga tcgcccggct tggcgagaga
     3241 ggcgagaacc gtggcggccc cgtgctgggc cccgctggtg atgatcacgc gctccgccgg
     3301 cacactcaga ccgctccgcc ccacccagcg cgctccgatc tcccggtggc gcgccatgcc
     3361 cggcgccggc tggtagtagt ccatgagccg gtcgaggtcg gaccgccgcg cgagggactg
     3421 cagcatcgcg gcgaccgtgc ccacccgggg atcgcgcacc agccggctct tgctcaggtc
     3481 gatcacctcg gcatccccgt cgtccaccgc gccggactcc aaccccggct ccggaccccg
     3541 cacgaaggtg ccgcgcccaa cctcgccgct cacgacccca cgctgctcag cctccgcata
     3601 cgcccggccc accgttccga tggctacccg caaccggtcg gccagctcgc gctgtggcgg
     3661 taggcgggtg cctggcggga gggttccggc ttcgacgtca cgcaggaggg catcgagcag
     3721 cgcctggtac ttgggctcgg cgcccgggag cagggtaggt gaccatattg tcatagagac
     3781 aatatgccat ttgacatggt tcaagtcaat ggcaatattg tgcaatcact ggattgaacg
     3841 gagccgccca tgagaaccac gccccttccc gcgccgcccg cctcggcccc accgtggcgg
     3901 cggccccggc tccgggtgtc cgcgccgagc ccggccgctg ttgcagcgaa cgccggcgga
     3961 gcaggggtca aggccgcggt ggcgttcgtc ggtctgtgcg tcatctgggg ctccacctgg
     4021 ctcgcgatca aggtcgggct ccgcgatctc ccgccgatca gttttgccgg gatcagattc
     4081 gcgctggcgg cgctcatcct cctcgtgatc gtatcggtgc gaggcctccg gctcccctgg
     4141 gccgcgcggg actggcggct cctcctctgg accggtctgc tctcgatcac ggtgaactac
     4201 gccctggtct tctgggccga gctgcacatc tcgtccggac tggcggcggt gctcaacgcg
     4261 accattccgc tcttcgggct cccgctcgcg caccgcgtgc tcgcggcgga gccgatgacc
     4321 ccgcacaagg tgggcggcgt cgtcctcggc gtgctgggta tggcgatcgt cttcggcgcg
     4381 gagctcggcg ggaacacgcc gatggcggcg tgggcgagcg ccggcgtact cgtcgcgtcc
     4441 ctcgccgggg cacaggccgg catactggtg aaggccaggg gcacccatct ggacccggcc
     4501 gtcctggcgg gcgtgcagat gaccttcggc tcggtgccgt tgctcctggg gggcacgctc
     4561 ctggagggca atccgctcca gttggcctgg acgccttcgg cgctgctctc gctggggtac
     4621 ctgaccgtgg tcgggtcggt ggtggcgttc ctcgcctact actggctgat ccggcagatc
     4681 gacgtgacgc gggtcctgct gatcccgctg atcacgccgc tggtggcgct gggcctgggc
     4741 tccgtcttcc tgggcgagga tgtagggtgg ggaacggcgg tgggtggggg agcgattctc
     4801 ggcggtgtcg cgctcgcggt atggaacggg gggcgccgct gatcgcgaca ccccccgttc
     4861 ctcactacgc ctcggtcaga gcgatcaggc cgcggactcg gcgcggctgg cgcggcgggt
     4921 ctcgacctgg cgcttgagcc agtcgatctg gtccttgatg gtctgccgcg tagccttggt
     4981 ggccagccac tcgagtgcgc ggcgccgctc ctcctcggag aagaccggcg actcggccag
     5041 tcgctggtag aacgccacct gcttctcggt gggcgcgtag ggacccaccc ggctcaccga
     5101 ctcggtgcgc tccactgcgg gcaccgggac cggggccgtc ggggatgcgg cagccggcgc
     5161 cgcagcggag gccgtagcgc cctcgagcac ccgggccagg ccgctctgac gcgcggaggc
     5221 gatgacctgc gcccggatgt tgccggggat gagccggaag cgagcgttcc tcgccgcctt
     5281 catcgcgccg gcctcatacc agtgcgggtt gagctggcga ccccgccgcg acaccacgtc
     5341 ctctcccgcc aggatgcgcc gggcgaactc ccggatctcg gtctcggcga agttctcggc
     5401 catccacgcg agatagtccc gcccctccgc cgtggtcagc agctcacggt aggtcttgcc
     5461 acggtacttc cggctcggca cgcgggagtc gaggtcgagc tgggccggct cgtagtagag
     5521 cggctgccgc ttgaccccga tgacctgatc gagccggact tcctgccccg cgggcgagac
     5581 ggcaaaccgg gccgccttca ccttgaacag cgcctcccgc tcctcccctt cgccgagcag
     5641 ctcgtactgg aggttctcct cccggatgac ctgtccctgc gagaccagcg ccatgcaaca
     5701 ttcgtccacc ccggtcttgc tgaggccgac gacctcctgt ccaccctcct tcaccacgta
     5761 caccagatcg gtcgaggcga cgccatccag ctcccgccgc aacgcctctt cgtccattcg
     5821 gtccatcagc tgaaacgggt cccattgcgg ggccgccggt acggctggcg cctccgcggg
     5881 aacgggcaaa gcttccgaca tgtcccactc ctgctctatg taaacgggcc acgacccggt
     5941 actccggata ccgcatcaac tctggaagac tctcccggac cttgatgcgt aacaccaaat
     6001 ctaacaacgg cttagcccat gtcaacaggc tctatgtccg ccgctgacat gcagttagcc
     6061 gatcgggttt cgggattgtt tcggggacac caggcgaagg tccgcgaggc tcggaaaagc
     6121 agagagggac gagctggttg gccggtccct ctcaggcgtg cggtgcggcg gcagggcggt
     6181 tattcatcgt cgctctggtt cttgtagagc caatactccg gtccggccat gctctcgggc
     6241 caatcgtcca ggtggagatc cccccgccag gcctcggcct cggctggctc ccattccgca
     6301 tccggcgtgt cccagggcag atctccctcc ccctcccagg gacgcccatc gtgttgactc
     6361 atacccgctc ctcggttggt ctccggacca caggggcacc cgcttgacga gcaaatgccg
     6421 ggccgccggg cccggcggtg gctggacggc tcggagcggc cggctcgggc tgccggggaa
     6481 ccaatcgagt atcggggaac tgcaagaagg ccggaaatgg gaggcgtcac actccccctg
     6541 gccaccctca tgagacaagc atgtctccag cgacagtcct ccctagggag aggacctacc
     6601 gcgttgcggg tggctcaact acaattccgt cccgcatgac gggacgtggc gcagcccggt
     6661 agcgcactgc aatggggttg caggggtcgc gggttcaaat cccgccgtcc cgatgggcac
     6721 agagccgacc gcagctggtc ggctttgtcg caacagctcg cctcccgtca tctccttcca
     6781 tttctcgagg tcttccatgc gtggctcagc cgtggctctc ttcgcgctca ttctctcagc
     6841 ttgcggcggt tccggcgacg acggccgcgc tgcgggcggt gccggtgact tcgcgatcga
     6901 ctcggcggcc ctgacccgga ccgggagcgg cctccaatac caggacgtca ccgtcggcag
     6961 cgggcccgag gcgcgtgagg gccaggtggc ggtggtccac tacaccggat ggctgacgga
     7021 cggcaccaag ttcgacagca gccgggaccg gaacgcaccg ttctcctttc ctctgggcgc
     7081 gggtcaggtc atccgggggt gggatgaggg cgtggcgggg atgaaggtcg gtgggcgtcg
     7141 caagctgttg attccagcca gcttgggcta cggtgacatg ggcgcgccac cggtgatccc
     7201 tccgggcgcc accctggtgt tcgacgtcga gctgctggac ctgaagtgag ctagatcaca
     7261 gccgagcggc gatgtctgac ctatagtcat acgccttctc cgttcaccag ccgcggaagc
     7321 agtctcgacc ggcgggtccc acccgggccc gggcccggcc gcgtctgtgt aggatcatca
     7381 cccaaagggg gacccgatgt tcactcgtca cggccgtcgc accgtgttgg ccgtcggtgc
     7441 gctcgcgatg gtcgtcggac tggccgggtg cgccgccaag gtgaagcagg aggacttcaa
     7501 caacgagatg gcgaagctcc ggcaggagat gcaggccggt gaccaggccg tcgcgactcg
     7561 gctggattcg accaaccagg ccgtcgccga gcagcgggcc cgactggatg cgctggagca
     7621 ggagctgcag gccttccgca gcgagtacac ggtgagcatc gagaaggtgc gcgggatgct
     7681 caagttcaac gttccggtcc acttcgagtt cgccagcagc gagctgcgcg aggccgatcg
     7741 tccggtgctc gatcgcttcg cctcggtggt caccgagtat tacccgggcg cgctggtcac
     7801 ggtggaaggc ttcaccgatc cctccggcag cgccgcctac aacatgcagc tcggcaagcg
     7861 ccgcgccgag gcggtgcagg aatacctcgc gacctcgggc ggactcaccg cggaccacct
     7921 gaaggccgtg agctatggtg agtcccgcaa ccggcaggta gtgcccggtg caaagggtcc
     7981 gggcgagctg ggggtcgaga accggcgcgt cgcgctggtc atcgaccacg ccgccgtcgc
     8041 caccgacgag gtcgcgctcg gcgactgagc ctcactcctc gtcgtgctcg tgctcgtc
//
LOCUS       DASUYN010000200         2195 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_64880, whole genome shotgun sequence.
ACCESSION   DASUYN010000200 DASUYN010000000
VERSION     DASUYN010000200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2195)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2195)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2195
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64880"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..860
                     /locus_tag="VF061_03985"
     CDS             <1..860
                     /locus_tag="VF061_03985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668690.1"
                     /translation="GGRMPPVRGSLLSSMPNVICTTCGVQYGESESAPGSCVICSEER
                     QYIGWQGQQWTTLDELRRDHRSRIEPEGPGLTGIGIEPSFAIGQRALHLRTAGGGFIW
                     DCTSLVDEAAVSTVRRLGGARAMAISHPHFYSAMVEWSRALGGIPIYLHEADRAWVMR
                     DDPAIVYWGGDRLEIEPGLTLIHCPGHFAGSTALHWADGADGLGALLTGDTIMVAQDR
                     RTVSFMYSYPNLIPLGPGTVERIVAAVEPYDFEQIYGGWTGKNVREAGKAAVRYSARR
                     YLRAIERGD"
     gene            853..>2195
                     /locus_tag="VF061_03990"
     CDS             853..>2195
                     /locus_tag="VF061_03990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEX6668691.1"
                     /translation="MTESGGRRGGSALAVDLRRARAARRREQRAKEPAAAPTPRRRPA
                     RVVECADRDPVDCVREWFGRHEWEPFPFQEEVWRAYLAGESGLIHAATGTGKTYAAWM
                     GPVMEWLRDYPSARRRPAAPLRVLWVTPLRALAGDTEAALRAPVEDLGLPWSVESRTG
                     DTPARVRARQRERLPTALVTTPESLSLLLTRDDAPTLFDHLELVVVDELHELMASKRG
                     VQTELCLARLRRFRPDLRTLGLSATLGNLDTARDALLGVDAEGHPRAGRIFQGLVPKA
                     LVVDALIPESMERFPWSGQIGLRLLPEVIAAVEEGETALVFTNTRATAEIWFQALLAA
                     RPDWAGILALHHGSMDRGTREWVEDGLREGKLRCVVCTSTLDLGVDFTPVDRVLQVGS
                     PKSVGRLIQRAGRSGHRPGAVSRLTCVPTNALELVDVAAARAALEAREIEARRPV"
BASE COUNT          288 a          792 c          814 g          301 t
ORIGIN      
        1 cgggcggccg catgccgccc gtccggggaa gtttactttc cagcatgccg aacgtcatct
       61 gcacgacctg cggcgtgcaa tacggcgagt ccgagtcggc gccggggtcg tgcgtgatct
      121 gctccgagga gcggcagtac atcgggtggc agggacagca gtggaccacg ctggacgagc
      181 tccggcgcga ccaccggagc cggatcgagc ccgaaggccc gggcctcacc ggcatcggca
      241 tcgagccgtc cttcgccatc ggccaacggg cgctgcacct ccgcaccgcc ggcggcgggt
      301 tcatctggga ctgtaccagc ctggtggacg aggcggccgt gtccacggtg cgcaggctgg
      361 gcggcgcccg cgcgatggcc atctcccatc cccacttcta ctcggccatg gtcgagtgga
      421 gccgcgccct cggcgggatc ccgatctacc tgcacgaggc cgatcgcgcc tgggtgatgc
      481 gggacgaccc cgccatcgtg tactggggcg gcgaccggct cgagatcgag cccggcctca
      541 ccctgatcca ctgtcccggc cacttcgccg ggagcaccgc cctccactgg gccgacggcg
      601 ccgatgggct gggcgccctc ctcacgggcg acaccatcat ggtggcccag gatcgccgca
      661 cggtgagctt catgtacagc taccccaacc tgattcccct gggtcccggc acggtcgagc
      721 ggatcgtcgc cgcggtcgag ccgtacgact tcgagcagat ctacggcggc tggaccggga
      781 agaacgtccg ggaggccggg aaggccgcgg tccgctactc cgcacggcga tacctccggg
      841 cgatcgagcg cggtgactga gagcgggggg cggcggggcg gatccgcgct ggcggtggac
      901 ctccgccggg cgcgggcggc caggcgccgg gagcagcgcg ccaaggagcc cgccgcggcc
      961 cccacgccca ggcgccggcc cgcgcgggtg gtcgagtgcg ccgaccggga cccggtcgat
     1021 tgcgtgcggg aatggttcgg gcgccacgag tgggagccgt tcccgttcca ggaggaggtc
     1081 tggcgcgcct acctcgcggg ggagagcggt ctcattcacg ccgcgaccgg caccggcaag
     1141 acctacgccg cctggatggg gcccgtgatg gaatggctcc gcgactatcc gtccgcccgc
     1201 cgccgcccgg cggcgccgct ccgggtgctc tgggtgacgc cgctccgggc actcgcgggc
     1261 gacaccgagg cggcgctccg cgcgccggtc gaggatctgg gattaccctg gagcgtggag
     1321 tcacgcaccg gcgacacgcc cgcgcgggtg cgcgcccgcc agcgggaacg gctgcccacc
     1381 gctctggtca cgactcccga gagcctctcc ctgctgctga cccgcgacga cgcccccacg
     1441 ctgttcgatc acctcgagct ggtcgtggtg gacgagttgc acgagctcat ggcctcgaag
     1501 cgcggcgtgc agaccgagct ctgcctcgcg cggctgcgcc gcttccggcc ggaccttcgc
     1561 accctgggcc tctccgccac cctcggcaat ctggacacgg cgcgggacgc cctgctcggc
     1621 gtggacgccg aggggcatcc ccgggccggg aggatcttcc agggactggt gcccaaggcc
     1681 ttggtggtgg acgcgctcat cccggagtcc atggagcggt ttccctggtc gggccagatc
     1741 gggctgcggc tgctgcccga ggtgatcgcc gcggtcgaag agggcgagac cgcgctcgtg
     1801 ttcaccaata cccgggccac cgccgagatc tggttccagg ccttgctcgc cgcgcggccc
     1861 gattgggcgg gcatcctggc gctgcatcac ggctcgatgg accgcggcac ccgcgagtgg
     1921 gtggaggacg gcctccggga ggggaagctc cggtgcgtcg tgtgcacctc cacgctcgac
     1981 ctgggcgtgg acttcacccc ggtggatcgc gtcctccagg tgggaagccc gaagagcgtg
     2041 ggccgcctga tccagcgcgc gggccggagc ggccaccggc ccggcgcggt gagccggctg
     2101 acctgcgtgc cgaccaacgc gctcgagctg gtggatgtgg cggccgcgcg ggcggcgctc
     2161 gaggctcgcg agatcgaggc ccgccgcccg gtgga
//
LOCUS       DASUYN010000201         2923 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_948840, whole genome shotgun sequence.
ACCESSION   DASUYN010000201 DASUYN010000000
VERSION     DASUYN010000201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2923)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2923)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2923
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_948840"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..249)
                     /locus_tag="VF061_03995"
     CDS             complement(<1..249)
                     /locus_tag="VF061_03995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668692.1"
                     /translation="MTPENLLTTGAGALCLALGAGLLQGERERRHAAAGLLVLGLAIG
                     AWHAGSPPGGGLTPPGRLGQGFLVGNGGLLLLGAALGCV"
     gene            519..1544
                     /locus_tag="VF061_04000"
     CDS             519..1544
                     /locus_tag="VF061_04000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018250722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000902 - cell morphogenesis [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HEX6668693.1"
                     /translation="MPRRRTWRPASELAVDLGTANTLVLVKGEGVVLNEPSVAAVDQA
                     TGNIMGIGLEAKRMLGRTPDGILAVRPMKDGVIANFEVAEKMLRHFLRLVIDRTILKV
                     KPSVIVCVPSGITEVERRAVRDSARSAGVKRLLMVAEPMAAAIGVGLPVETPAGCMVI
                     DIGGGTTNIAVIALSGIVCDASIRTGGDELDQSIVHYMRKTYSLLVGEPTAERIKMRI
                     GSAVPLHPEEELDVKGRDLVSGLPKIVRIDSSGVRDAMQEPISRIVNAVRRALEMTPP
                     ELASDILERGIVLTGGGALIRGLDQLLMDETGLPVRVDEDPLTSVVRGTGRILDDFPR
                     YGSVLTT"
     gene            1955..2377
                     /locus_tag="VF061_04005"
     CDS             1955..2377
                     /locus_tag="VF061_04005"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX6668694.1"
                     /translation="MPSPWEVLVIEDDELDRALVCELLTVRGRGGVRVAEVANLQAGL
                     DQLESRRFDLVMLDTKLPEATALHALRAVGEKAPLTPILPHPAYISVQTRHAARQRGA
                     FDVVVRGDLNPMWAAVNKLLTLSTFGSDINPPARAVGQ"
     gene            2530..2835
                     /locus_tag="VF061_04010"
     CDS             2530..2835
                     /locus_tag="VF061_04010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668695.1"
                     /translation="MNARQSGPARPAQARGREARLRADFGYLYPGLEAGVWTPVEVLI
                     NRVVTLLYGDPANSGRITGARLLRDDHFEFRGASPRPEGWPERLTRMSDASTPPDPS"
BASE COUNT          440 a         1053 c         1023 g          407 t
ORIGIN      
        1 gacgcatccc agggccgcgc cgagcagcag gagtcctccg ttgcccacca ggaagccctg
       61 gcccaggcgc cccggaggag tgagtccccc gccgggggga gagccggcgt gccaggcccc
      121 gatggccagc cccaggacca ggagcccggc agccgcgtgc ctccgctccc gctcaccctg
      181 gaggagccct gccccgaggg cgaggcaaag cgccccggcg ccggtcgtaa ggaggttttc
      241 gggtgtcatc agcgtggctg gagacttgca cttacgccaa gacgtgcagc acccgctacc
      301 cgcggcaaga ccgcgcctcc ctcggaaaag cgcgagagcg ggacggactt ccgggaccca
      361 cgggacgggg gccggccggg tgaaacgcaa tcggcgcggg acatctgcaa ggtgagactc
      421 atctcttccc gggaatccag cacgtgacag ccacggtcga actgatcaac gccactcccg
      481 acgtcatcgc ccaggaaggc gccgagcgcc gccgggccct gccacgccgc aggacctggc
      541 gtcccgccag cgagctggcc gtggacctcg gcaccgcgaa cacgctcgtc ctggtgaaag
      601 gcgagggcgt cgtgctgaac gagccctcgg tcgccgccgt ggaccaggcc accgggaaca
      661 tcatggggat cggtctggag gccaagcgca tgctgggccg cacgccggac ggcatcctcg
      721 cggtgcgccc gatgaaggac ggcgtgatcg cgaacttcga ggtcgcggag aagatgctgc
      781 ggcacttcct ccgactggtc atcgaccgga cgatcctcaa ggtgaagccc agcgtgatcg
      841 tgtgcgtccc gtccggcatc accgaggtgg agcgtcgcgc cgtccgcgac tccgcccgct
      901 cggccggcgt gaagcggctc ctgatggtgg ccgagccgat ggcggcggcc atcggcgtgg
      961 ggctgccggt ggagacgccg gccgggtgca tggtgatcga catcggtggc ggcacgacca
     1021 acatcgcggt catcgcgctc tccgggatcg tctgtgacgc ttcgatccgc accggcgggg
     1081 acgagctgga ccagtcgatc gtgcactaca tgcgcaagac ctacagcctg ctggtgggcg
     1141 agcccaccgc agagcggatc aagatgcgca tcggctccgc cgtgccgctc caccccgagg
     1201 aggagctgga cgtgaagggc cgggacctgg tctccggcct ccccaagatc gtgcgcatcg
     1261 attcctccgg cgtgcgggac gcgatgcagg agccgatctc ccggatcgtg aacgcggtgc
     1321 gccgggcgct ggagatgacg ccgcccgagc ttgccagcga catcctcgag cgcggcatcg
     1381 tgctcaccgg tggcggtgcc ctcatccggg gcctcgacca gctcctcatg gatgaaaccg
     1441 gtcttccggt ccgtgtggac gaggatcccc tgacctccgt agtccgcggg accgggcgga
     1501 tcctcgacga ctttccccgc tatggcagcg tcctgacgac ctgagcgtgc cgggggcact
     1561 gcccccgggc cccagcccca cacgccggca ttcgcgccca cgggcgagga tggccggcgt
     1621 gtggtctttg tgggaactcg gcaacaggtg gggaccacaa ggggccggcg gaggccaggc
     1681 cggatgcccg gcgccggatg ggatcccgcc gggatctggt gcagcaattc cttcgagggc
     1741 aagaggatac aggagcgctg gaaggccggc ttcgggagac ctcgcgggtg gcacatctct
     1801 ggcctccctc gtcgtcgccc ccgcggacac cgggtccggg cgggttcgcg agccttcagg
     1861 aggtcctcga tgccggccca ggccctgttc tcggtcacgc tgagcgccat cacgctggcg
     1921 agcggcgcct ccccgtcgtc cggcggccgc tgacatgccg agcccctggg aagtcctcgt
     1981 catcgaggac gacgagctcg accgcgcgct ggtctgcgag ctgctcaccg tgcgcggccg
     2041 gggcggcgtg cgggtcgccg aggtggcgaa cctccaggcc gggctcgacc agctggagtc
     2101 gcgacgcttc gacctggtca tgctggatac caaactgccc gaggccactg cgctgcacgc
     2161 gctccgggcg gtgggcgaga aggcgccgct cacacccatc ctcccccacc ccgcctacat
     2221 ctcggtgcag acgcgccatg ccgcgcgcca gcgcggtgcc ttcgacgtcg tggtccgcgg
     2281 cgatctcaac cccatgtggg ccgccgtcaa caagctgctc accctgagca ccttcggcag
     2341 cgacatcaat cctcccgcga gagcggtcgg ccaatgagcg gctgggcggc ggcatacgcc
     2401 accgccgacc gggtcggctc gtggaccacc acctggaact ggttgcgagg ggcccgggag
     2461 ccgggtagcc ttgtggcgac cgcggcaaat tcgtggtcgt accggctttc catctggagg
     2521 aggtcccgcg tgaatgcccg ccagtcgggg ccggcccgac ctgcccaggc gcgggggcga
     2581 gaggccaggc tccgagccga cttcggctac ctgtatcccg gcctcgaggc cggcgtctgg
     2641 acgccggtcg aagtcctcat caatcgcgtc gtcacgctcc tctacggcga ccccgccaac
     2701 tccgggcgga tcaccggcgc caggctgctg cgggacgacc acttcgagtt ccggggcgcc
     2761 tccccgcggc ccgagggctg gcccgagcgc ctcacccgga tgagcgacgc ctcgaccccg
     2821 cccgatccca gctgacagcg gatgccggtt gtggtccgcc ggccgactcg ggcgtccgtt
     2881 ccagacgccg gcgcccacgg cgccgagcat ttcatccatc gcg
//
LOCUS       DASUYN010000202         3028 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_286974, whole genome shotgun sequence.
ACCESSION   DASUYN010000202 DASUYN010000000
VERSION     DASUYN010000202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3028)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3028)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3028
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_286974"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1896)
                     /locus_tag="VF061_04015"
     CDS             complement(<1..1896)
                     /locus_tag="VF061_04015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668696.1"
                     /translation="MSKAGGAKCGAGCTCETCRGIRDETPLAVENRYGLSAIRYRVGD
                     HARFKESLLAGLSRAALPALRELTTRRDDDFSIGLLDAFAVMADVLTFYQERIANESY
                     LRTATERLSIGYIARLIGYQLRPGAAARTAIAFTMQEGAGAVEKLRLPVGTRVQSTPG
                     PEEKAQVFETVEEVELRPDWNAVPALSLQEQQLGSLTDRVRLEGAGLNLRKGDDLLLV
                     FPTPNATGFTASFRRVRSVEEGPRRVRSVEEGPQGQWTMVLLTPQIAGAAFDSLTPLQ
                     TGVFVFRKHASLFGYNAPDFKTLDALKTPPSGEPDWPLADSATTEDWLTLDAVYRESV
                     PGTWGVWDPPGTTDSPLIFSVSTAVEAGVAAYALSGKVTQLNIERGKGITTSIKPSSF
                     AALRSISVMLQPEKLELAKTPAIWPVWGNTVVFAQAVKGLEPGRMVALRGKLLRAEVL
                     KPVTLYLLAGTGVIQKVLQPDDRLDLLLFPIPIADGSSTVFVAVQDGLLGFVFALPGQ
                     VRYRNDEVGVELVTITSVAADRRSVTFDPPLAQRYDPPSVTLNANLAESTHGESVRET
                     FAGGDATRVFQRFPLQQTPLTYVPATTPSGVRSTLRVWVDEIEWHGVSSLYGRGPNDR
                     VFITRRDG"
     gene            complement(1893..>3028)
                     /locus_tag="VF061_04020"
     CDS             complement(1893..>3028)
                     /locus_tag="VF061_04020"
                     /inference="COORDINATES: protein motif:HMM:TIGR02243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="putative baseplate assembly protein"
                     /protein_id="HEX6668697.1"
                     /translation="VDAVLARFRPRLRQGPVTQVGQVLLENGVTRLAAFDPDGSAAAA
                     FQWSLRRVLPAIELTSDGTEGWIPQRELLDSHPADRHFMAEIEDDGSTTLRFGDAELG
                     MRPEAGSSFTAIYRVGTGTAGNVGAEALAHLADGVSGINVPSVLLVRNPLPASGGVDP
                     ETSEEVRQKAPFAFRTQERAVTLADYEEMALRHPGLQRAAARFRWTGSWRTVFVTLDP
                     LGGDTITPDPALKQKVRNHLERYRLAGYDLEVDDPHYVSLEIELHVCVRSGYFEADVR
                     QALLEVFSNRTRADGLKGLFHPDRFSFGEAVYLSPLFRAALAVDGVESVRCVTFRRQG
                     KPDQDKALKEGRIVLNRLEIVRLDNDPNFPEHGTFRVSTGGAP"
BASE COUNT          491 a         1018 c         1042 g          477 t
ORIGIN      
        1 tccgtcgcgg cgggtgatga acacccggtc gttcggcccc cggccgtaga gcgaagacac
       61 cccgtgccac tcgatctcat ccacccatac ccggagcgtc gagcggacgc cgctgggtgt
      121 ggtggcgggg acgtaggtga gcggggtctg ctggaggggg aaccgctgga agacgcgggt
      181 tgcatcgccg ccggcgaacg tctctcgcac cgattcaccg tgggtcgatt cggccaggtt
      241 ggcgttcaac gtgacactgg gcgggtcgta ccgctgggcc aggggcggat cgaacgtgac
      301 gctcctccgg tcggccgcca cgctcgttat ggtgaccagc tccactccga cttcatcgtt
      361 ccggtagcgg acctgtccgg gcaaggcgaa gacgaagccg agcagcccat cctggaccgc
      421 gacgaacacc gtgctgctcc cgtccgcgat cgggatggga aacagcaaaa ggtcgaggcg
      481 gtcgtccggt tgcagaactt tctgaatcac tccggtgccg gccagcagat ataacgtgac
      541 cggcttgagc acctcggcac gaagcagctt gcctcgaagc gccaccattc gaccgggttc
      601 gagccccttg acggcctgcg cgaagaccac cgtgttgccc cagactggcc agatggcggg
      661 agttttggcg agctccagct tttcgggctg gagcatgacc gagatcgagc ggagcgccgc
      721 aaacgagctc ggcttgatcg atgtggtgat gcctttgccc cgctcgatat tgagctgagt
      781 caccttgccg ctgagcgcgt aggctgcgac gcccgcctcg accgcggtcg acaccgaaaa
      841 gatgagcgga ctgtcggtcg ttcccggggg atcccacaca ccccaggtcc cgggcaccga
      901 ctcccgatag accgcgtcga gggtgagcca gtcctcggtc gtggccgagt cggccagggg
      961 ccagtccggc tcgccggagg gcggggtctt gagcgcgtcc aacgtcttga agtccggcgc
     1021 attgtagcca aacagggagg catgcttccg gaagacgaac acgccggttt gcagcggcgt
     1081 cagcgagtcg aatgccgcgc cagcgatctg gggggtcagc aggaccatgg tccactggcc
     1141 ctgcgggccc tcctcgaccg accgcactct ccgtggcccc tcctcgaccg accgcactct
     1201 gcggaaggac gcggtgaagc cggtcgcatt cggcgttgga aagaccagga gcaagtcgtc
     1261 gcccttgcgg aggttgagcc cggccccttc cagccggacg cggtccgtga gcgagccgag
     1321 ctgttgttcc tggagcgaca gggccggaac cgcgttccag tcgggacgga gctcgacctc
     1381 ctcgaccgtc tcgaagacct gtgccttctc ttccggaccg ggcgtgctct ggactcgggt
     1441 accgacgggg agcctcagct tctccaccgc accggcgccc tcctgcatgg tgaacgcgat
     1501 cgcggtgcgc gcggccgcgc ccggccgcag ctggtagccg atgaggcggg cgatgtagcc
     1561 gatcgagagc cgctcggtgg cggtccggag atacgactcg ttggcgatcc gctcctgata
     1621 gaaggtcagc acatcggcca tgacggcgaa ggcgtcgagc agcccgatgg agaagtcgtc
     1681 gtcccggcgg gtggtcaact cccgcaacgc gggcagcgcg gcccgggaga gcccggccag
     1741 gagactttcc ttgaagcgcg cgtgatcgcc cacgcgatag cggatggccg agaggccgta
     1801 gcggttctcg accgccagcg gggtctcgtc gcgaattccg cggcaggtct cgcaggtgca
     1861 gccggccccg cacttggcgc caccggcctt gctcacggcg cgcctcccgt gctcacccgg
     1921 aaggtcccgt gctccgggaa gttcgggtcg ttgtccagcc ggacaatctc gagccgattc
     1981 aggacgatcc tcccttcctt aagagccttg tcctggtcgg gcttgccctg acgccggaag
     2041 gtcacgcacc gcaccgactc caccccgtcc accgcgagcg cggcccggaa cagggggctc
     2101 aggtacaccg cctcgccgaa gctgaagcga tcgggatgga aaaggccctt caggccgtcg
     2161 gcgcgggtgc ggttgctgaa cacctccaga agcgcctgcc gcacgtcggc ctcgaagtat
     2221 ccggacctca cacagacgtg gagctcgatc tcgagcgaga cgtagtgcgg atcgtccacc
     2281 tcgaggtcgt agccggcgag gcggtagcgc tccagatgat tccgcacttt ctgcttcaga
     2341 gcgggatcgg gggtgatggt atcgcccccc agcgggtcga gcgttacgaa gaccgttcgc
     2401 cagcttccgg tccagcggaa ccgagccgcc gcccgctgga ggcccggatg gcgcagggcc
     2461 atctcctcgt agtccgcgag ggtcacggca cgctcctggg tgcggaaggc aaacggcgcc
     2521 ttctggcgga cctcctcgga agtctccgga tccactccgc ccgaggcggg cagcgggttg
     2581 cgcacgagca gcaccgatgg gacgttgatc cccgacacgc cgtcggccag atgggccagc
     2641 gcttccgcgc ccacgtttcc agccgtgccg gttcccaccc ggtaaatggc ggtgaaggac
     2701 gagcccgcct ccggccgcat gccgagctcg gcgtcgccga accggagcgt ggtcgagccg
     2761 tcgtcttcga tttccgccat gaagtggcga tcggcgggat ggctgtcgag tagctcgcgc
     2821 tgagggatcc agccctcagt gccgtcggag gtgagctcaa tggccgggag cacccggcgc
     2881 aggctccact ggaaggcggc agcggccgag ccgtcggggt cgaaggcggc gaggcgcgtg
     2941 acgccgttct ccaacaggac ctgccccacc tgcgttaccg ggccctgccg cagtctcggc
     3001 cggaagcggg ccaacaccgc gtcgacgt
//
LOCUS       DASUYN010000203         2112 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_507705, whole genome shotgun sequence.
ACCESSION   DASUYN010000203 DASUYN010000000
VERSION     DASUYN010000203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2112
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_507705"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1113
                     /locus_tag="VF061_04025"
     CDS             <1..1113
                     /locus_tag="VF061_04025"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX6668698.1"
                     /translation="AESLMDLSPWNYGEARGTKARPGTRDVVTTLERTLKQYPDHLGA
                     CHFYIHIVEASTTPGRALPCADKMARQIPGAGHLVHMPSHIYMRVGYYDRVVNHNHDA
                     VEADQTYVQDRKPTGFYQYTYYPHNWHMLWYGLIQLGRGAEAINASRELVKVVPVDVV
                     KTVPPLEYFFPAPYWSLVRFGKYDEMLAEPAPDASLKYATAMWRYGRGLAFVAKGRTD
                     EAAAELNSVAAAVEATPKEAPAGINSQKKLLSLAERHLAGKVAVAKGDTAAAIAALEQ
                     AIGHEDELLYDEPPAWYHPIRQELAAIHLAMGHAPVAEKLYREDLVHFPNNGWSLYGL
                     ARSLEAQKKSAEAAKVDAQYRKWWDKADVKPLAIGS"
     gene            complement(1208..>2112)
                     /locus_tag="VF061_04030"
     CDS             complement(1208..>2112)
                     /locus_tag="VF061_04030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668699.1"
                     /translation="SPADSARWPVKGAEPLPGSLLPEHRIIAYYGNPRSTRMGIMGQI
                     PPDSMLPRLEEVAMRWALADRERKVMPALHLIATVAQGSPGPGRKYRLRMGDSLISMV
                     ASWAEERGWILFLDVQVGQSTVEDELPPLLPYLQRPYVHLALDPEFSMKAGGVPGKRI
                     GTMDAADVNHAVEVLGNLVTEHKLPPKVLVVHRFTRKMLTNTDSIRLDPRVQVVIQMD
                     GFGSPYLKQDAYRFWISPYPVQYAGFKLFYKNDREPKARAPGYVPSCDRVTFELVGCG
                     DDGLMTPEQVISGLYPVPLYIQYQ"
BASE COUNT          351 a          738 c          709 g          314 t
ORIGIN      
        1 gccgagtcgc tgatggacct ctcgccctgg aactacgggg aggcgcgcgg gaccaaggcg
       61 cggccgggca cccgggacgt cgtcaccacg ctcgagcgga cgctgaagca gtatcccgac
      121 caccttggcg cctgtcactt ctacatccac atcgtcgagg cctcgaccac gccgggccgg
      181 gccctgccct gcgccgacaa gatggcccgg cagatccccg gggccggaca cctggtccac
      241 atgccgtcgc acatctacat gcgcgtcggc tactacgacc gggtcgtgaa ccacaaccac
      301 gacgccgtcg aggccgatca gacctacgtg caggaccgga agcccaccgg cttctaccag
      361 tacacctact acccccacaa ctggcacatg ctctggtacg ggctgatcca gctgggccgc
      421 ggtgccgagg cgatcaatgc gtcgcgcgag ctggtgaagg tcgtcccggt ggacgtggtg
      481 aagacggtgc cgccgctgga gtacttcttc cccgccccct actggtcgct ggtgcggttc
      541 gggaagtacg acgagatgct ggcggagccc gcccccgatg cctcactgaa gtacgcgacg
      601 gcgatgtggc gctacggccg gggcctggcc ttcgtcgcga agggccggac ggacgaggcc
      661 gcggcggagc tgaacagcgt ggcggccgcg gtcgaggcca ccccgaagga ggcgcccgcg
      721 gggatcaact cccagaagaa gctgctctcc ctcgccgagc ggcacctggc tggcaaggtc
      781 gcggtcgcga agggcgacac cgccgccgcc atcgccgcgc tggagcaggc gatcgggcac
      841 gaggacgagc tgctctacga cgagccgccc gcctggtacc acccgatccg gcaggagctg
      901 gccgcgatcc acctcgcgat gggccacgcg ccggtggcgg agaagctgta ccgcgaggac
      961 ctggtgcact tccccaacaa cgggtggtcg ctctacggtc tggcccgcag cctcgaggcc
     1021 cagaagaagt ccgccgaagc ggccaaggtg gacgcgcagt accggaagtg gtgggacaag
     1081 gccgacgtga agccgttggc catcggatcg tagagcgcag cgaagcaagt tgtcaccctg
     1141 agcggagcga agggggccat gtgcgagcat ggcccccttc acttcgttca gggtgacagg
     1201 ggacgcctca ctggtactgg atgtacagcg gcaccggata caatcccgaa atcacctgct
     1261 ccggcgtcat cagcccgtcg tccccgcacc ccaccagctc gaaggtcacc cggtcgcagc
     1321 tcggcacgta gcccggcgcc cgcgccttcg gctcccgatc gttcttgtag aacagcttga
     1381 agccggcgta ctgcaccggg tagggcgaga tccagaagcg gtaggcgtcc tgcttgaggt
     1441 agggcgagcc gaaaccgtcc atctggatca ccacctgcac ccgcgggtcg agccggatgc
     1501 tgtcggtgtt ggtcagcatc ttccgggtga agcggtgcac caccagcacc ttgggcggga
     1561 gcttgtgctc ggtgacgagg ttgcccagca cctcgaccgc gtggttcacg tcggccgcgt
     1621 ccatggtccc gatccgcttt cccgggacgc ctcccgcctt catcgagaac tcggggtcga
     1681 gcgcgaggtg cacgtagggc cgctgaaggt aggggagcag cggcggcagc tcgtcctcca
     1741 cggtgctctg gccgacctgt acgtccagaa acaggatcca gccgcgctct tcggcccacg
     1801 aggccaccat gctgattagg ctgtcgccca tcctgagccg gtacttccgg ccgggccccg
     1861 gactgccctg cgccaccgtc gcgatcaggt gcagcgccgg catcaccttc cgctcccggt
     1921 ccgccagcgc ccagcgcatc gcgacctcct ccagccgcgg gagcatggag tcgggcggga
     1981 tctgccccat gatgcccatc cgcgtcgagc gcgggttgcc gtagtaggcg atgatgcgat
     2041 gctcgggtag cagcgagcct ggcagcggct ccgcgccctt gaccggccat ctcgcggagt
     2101 ccgccgggct ca
//
LOCUS       DASUYN010000204         4983 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1388699, whole genome shotgun sequence.
ACCESSION   DASUYN010000204 DASUYN010000000
VERSION     DASUYN010000204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4983)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4983)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4983
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1388699"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..246)
                     /locus_tag="VF061_04035"
     CDS             complement(<1..246)
                     /locus_tag="VF061_04035"
                     /inference="COORDINATES: protein motif:HMM:NF019342.4"
                     /note="Members of this family of hydrolases with an active
                     site Cys residue belong to MEROPS family C26; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HEX6668700.1"
                     /translation="MSAPRIALGAVVRSWDGADRTGLNSAYVRSVLSAGGVPVMLSPI
                     MGPSYAARALDGVDGLVLTGGEDMDPAWYQAVPHPKAY"
     gene            complement(243..644)
                     /locus_tag="VF061_04040"
     CDS             complement(243..644)
                     /locus_tag="VF061_04040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668701.1"
                     /translation="MAAVAAASTLLEQFTIPNRTLAAPPASLPERTVARVVAAGAFPA
                     VVGRADTMLVIGVEGNPTGATPGFGVLVVDASERVQGVMLYEGNPIPGAPRLGEVSIG
                     ASSLPLIGVQADPAAFTDPSCPSLFPDSVLP"
     gene            818..1504
                     /locus_tag="VF061_04045"
     CDS             818..1504
                     /locus_tag="VF061_04045"
                     /inference="COORDINATES: protein motif:HMM:NF012383.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase"
                     /protein_id="HEX6668702.1"
                     /translation="MAGPERAKRFADRYEAGRQLAVALAAYRGRSDVLVVALPRGGVP
                     VGYEVARTLGVQLEVMQVRKLGVPGHEELAMGAIASGGVRIVSENVVEALGIPDRVIA
                     TVAAAEVQELERRERIYREGRLFPDVHGRTVILVDDGLATGSTMRAAAAALRALGAER
                     LVAAVPVAPVESCDALREAVDEVVCATTPPRFVAVGEWYEDFSQTSDEEVRELLRRAQ
                     GVPMSGGRPE"
     gene            complement(1524..1745)
                     /locus_tag="VF061_04050"
     CDS             complement(1524..1745)
                     /locus_tag="VF061_04050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668703.1"
                     /translation="MKRTSWILGSMTAFALAACGGGNAGDDAGSMGGAGTETGNPGMT
                     ADTAPAVGAMDTALTDTAGMTGTDTTAVQ"
     gene            complement(1849..2481)
                     /locus_tag="VF061_04055"
     CDS             complement(1849..2481)
                     /locus_tag="VF061_04055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668704.1"
                     /translation="MSHPDLRERFAGLWARLGGRGDGAQAFETVLGGWLEAHRRYHGL
                     DHLRDCLGRLDEASVSGHQRDVAEAALWYHDLVYQPGAADNESKSAERARAALAEGGV
                     PEDIADEIARLVLLTAHSAPAADPVGALVCDVDLSILGRPADAFAEYERRIREEYRQI
                     PESLYRAGRARVLKALLARAPLFRTDHFRRRYEETARRNLRRSLDAIGGR"
     gene            complement(2478..3515)
                     /locus_tag="VF061_04060"
     CDS             complement(2478..3515)
                     /locus_tag="VF061_04060"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX6668705.1"
                     /translation="MESVEHLIVGGGPAGLRAAQVLAEAGREALVAEKHEEIGPKTCA
                     GGLTPKAVSLLRDLGLPPDVGLARVGRVAFGLGRPVELDPELTVVVTLSRRRLGGYQA
                     SWTRAAGAEVRAGCAVRELDLAARTATVGGRPVRWRHLIGADGADSAVRRALGLPHSR
                     AWFAAEYNLPDVRLEPLRVECDPALRGGYFWVFPHDDYTSVGAVSAKHAVRPADLRAY
                     LDRRLARMGLEGSGAPFEAATLEVEFRGFHFPGHVHLAGDAAGVPSSLTAEGIYPALL
                     AGEEVAREILEPHYRSAKVARWLRVKRRHDRFATFLQRRLGRAVALPLLDRLSGWTPA
                     KRPMARWFLAG"
     gene            complement(3494..3970)
                     /locus_tag="VF061_04065"
     CDS             complement(3494..3970)
                     /locus_tag="VF061_04065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668706.1"
                     /translation="MPDSHCSICEQVAGRISAPGGPIYDDGLWLVSHHAGPRTDPGEL
                     IVKVRRHCETLGELTAAEAAALGPILRAGVAAIERVVRPERTYVASYNESVRHVHFFL
                     LPRTRSLPAGHVTSDLYRKARMWLRRTGVARNPTEADRAQAAARIREDPAWRASSI"
     gene            4153..4713
                     /locus_tag="VF061_04070"
     CDS             4153..4713
                     /locus_tag="VF061_04070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668707.1"
                     /translation="MFDGLKARLERLLRERGGADPRAYAAGLRDALVEARFGLTEMRR
                     ALAAAETELQSERKQLVDAERRGKLAAAVPDPETVAVAERFAARHRERIMVLERKVVV
                     QRDELQLAEREVEEMTVQWRTASRSGGASSASVDAAWRDLEAAGATRTPEDPDRIAAD
                     LDRKKREEAVEAQLAYLKRKMGKGKA"
     gene            4710..>4983
                     /locus_tag="VF061_04075"
     CDS             4710..>4983
                     /locus_tag="VF061_04075"
                     /inference="COORDINATES: protein motif:HMM:NF018024.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1028 domain-containing protein"
                     /protein_id="HEX6668708.1"
                     /translation="MNHPPGRWPRSTFLLGLSLSLVTVSGSRLSAQVPTEAPPHLQKI
                     AHTYSIVGWDSATGDLGVVVQSKFPNVGGIVPWARAGVGAVATQSLS"
BASE COUNT          731 a         1738 c         1840 g          674 t
ORIGIN      
        1 gtacgccttg gggtggggca cggcctggta ccaggcgggg tccatatcct cgcctccggt
       61 gagcaccagg ccgtccacgc cgtccagcgc gcgggcggcg tacgacggcc ccatgatcgg
      121 gctcaacatc accggaacgc ctccggccga cagcaccgag cgcacgtagg ccgaattgag
      181 accggtccga tccgcgccgt cccacgaccg cacgaccgcg ccgagcgcga tgcgcggagc
      241 gctcacggaa ggaccgaatc cgggaagagg ctcgggcagc tcgggtcggt gaacgcggcg
      301 gggtccgcct gcacgccgat gagtggcagc gaggatgctc cgatggagac ctcacccagc
      361 cgcggggcac cgggaatcgg attgccctcg taaagcatca cgccctggac ccgctcggac
      421 gcatccacca ccagcacccc gaagcccggc gtagcaccgg tggggttccc ctcgacgccg
      481 atcaccagca tggtgtcggc gcgacccacg acggcgggaa aagcacccgc cgcgaccacc
      541 cgggccacgg tccgctcggg gagtgaggcc ggcggggcgg cgagggtacg attgggaatg
      601 gtgaactgct cgaggagggt gctcgcggcg gcgactgccg ccaatccgca agcagccggg
      661 acgcgacctt cggagccacc gcacgctgcg gtgagcacga ggaacgaggc cagccagggc
      721 cggggcaaca tgtccataag atacccaccg gtcgaagccg ctccaacggt gagcccgctc
      781 acatcaggcc gccgcgtgcc gatctatgca tgaccccatg gccggaccgg aacgggcgaa
      841 acgcttcgcg gaccgatacg aggcaggccg ccagctggcg gtggcgctcg ccgcgtaccg
      901 cgggcggagc gatgtgctgg tggtcgcact cccgcgaggt ggggtgcccg tgggttacga
      961 ggtcgcccgc accctgggcg tccagctcga ggtgatgcag gtgcggaagc tcggcgtgcc
     1021 gggtcacgag gagctggcca tgggcgccat cgcctcgggc ggcgtgcgga tcgtgagcga
     1081 gaacgtggtc gaggccctcg gtatcccgga tcgggtgatc gcgaccgtcg ccgcggcgga
     1141 ggtgcaggaa ctggagcgcc gggagcggat ctatcgtgaa ggccggcttt ttcccgacgt
     1201 gcacggacgc accgtgattc tggtggacga cgggctcgcg accggatcca ccatgcgtgc
     1261 cgcggcggcg gcgctccgcg ccttgggggc cgagcggctg gtcgccgcgg tgccggtcgc
     1321 accggtggag agctgcgacg cactgcgtga ggcggtggac gaggtcgtgt gcgcgacgac
     1381 cccgccccgc ttcgtggcgg tgggcgagtg gtacgaagat ttctctcaga ccagcgacga
     1441 ggaagtgcgc gagctgttgc gccgagcgca gggcgtgccg atgagcggcg gccggcccga
     1501 gtgagcgccg gccgcgcgga aggttactga acggcggtgg tatccgtccc ggtcatcccg
     1561 gcggtatcgg tcagggccgt gtccatggcg ccgacggcgg gcgcggtgtc ggcggtcatg
     1621 ccggggttgc cggtttcggt gccggctccg cccatcgatc cggcgtcgtc acccgcgttg
     1681 ccaccgccgc aggcggccaa cgcgaaggcc gtcatggagc cgagtatcca ggatgtgcgc
     1741 ttcatggaaa tgtccctttc cgtcactggt tgtcgtcctg cccctgcccg ctctttgacc
     1801 gcgaacgcta agggcaaccc tgacccgccg acgtgatctg cgtcacgttc aacggccccc
     1861 gatggcgtcc agggagcgtc gcaggttgcg ccgggcggtc tcctcgtagc gacggcggaa
     1921 gtggtcggtc cggaacagcg gcgcccgggc caggagtgcc ttcaggactc gggcacgtcc
     1981 ggcccggtac agcgactcgg gaatctgccg gtattcctcc cggatgcgcc gctcgtactc
     2041 cgcgaaggcg tcggcggggc ggccgaggat ggagaggtct acatcgcaga ccagggcccc
     2101 aacggggtcg gccgccggcg ccgagtgggc cgtgagcagg accagccggg cgatttcgtc
     2161 ggcgatgtcc tcgggcacgc cgccttcggc cagcgcggcc cgcgcccgct cggcgctctt
     2221 ggactcgttg tcggcggcac cgggctggta gacgaggtcg tggtaccaca gggcggcctc
     2281 ggcgacatcg cgctggtggc ccgagaccga tgcctcatcc aggcgcccga ggcagtcccg
     2341 aagatgatcc aggccgtgat accggcggtg cgcctccagc cagccaccaa gcaccgtctc
     2401 gaaggcctgc gccccgtccc cgcgtccccc cagcctggcc cacaggccgg cgaaccgctc
     2461 gcgaaggtcg ggatggctca tcccgccagg aaccatctcg ccatggggcg cttcgcgggc
     2521 gtccagccgg aaagccggtc cagcagtggg agcgcgaccg cgcgacccag gcggcgctgg
     2581 agaaaggtcg cgaagcgatc gtgccggcgc ttcacccgca gccagcgggc gaccttcgcc
     2641 gagcggtagt gcggttccag gatctcacgg gccacctcct cgccggcgag cagcgccggg
     2701 tagatcccct ccgccgtcag ggaggaaggc acaccggcgg cgtctcccgc caggtggacg
     2761 tgacccggga aatggaatcc gcggaactcc acctccagcg tggcggcctc gaacggtgcg
     2821 ccgctgccct ccaggcccat ccgtgccagc cgacggtcca ggtaggccct gaggtccgcc
     2881 ggccgcaccg cgtgcttcgc cgacacggcg ccgaccgagg tatagtcgtc gtgcgggaag
     2941 acccagaagt agccccctct cagcgcggga tcgcactcca cccgcagcgg ctccaaccgt
     3001 acatcgggaa ggttgtactc cgccgcgaac caggcccgcg agtgagggag gcccaacgcc
     3061 cgccgcacgg cggagtcggc gccgtcggcg ccgatgagat ggcgccagcg gacaggtctt
     3121 ccccccaccg tggcggtgcg ggcggccagg tccagctcgc ggaccgcgca acctgcccgg
     3181 acttcggccc ccgcggcgcg ggtccagctg gcctggtatc cgcccagccg acggcgggag
     3241 agggtgacga ccaccgtcag ttcgggatcg agctcgacgg gccggccgag gccgaacgcg
     3301 acccggccca cccgggccag gccgacgtcg ggtggcaggc cgaggtctcg cagcagggaa
     3361 accgccttgg gggtgagccc gccggcgcac gtcttggggc cgatctcctc gtgcttctcc
     3421 gccaccaggg cctcgcgtcc ggcttccgcg agcacctggg ccgcgcgcag gccggccggt
     3481 ccgccgccga cgatcagatg ctcgacgctc tccacgccgg atcctcgcgg atccgggcgg
     3541 ccgcctgcgc ccgatccgct tcggtgggat tgcgcgcgac gccggtccgc cggagccaca
     3601 tccgcgcctt gcggtagagg tcggaagtga cgtggccggc gggaagcgac cgggtgcgcg
     3661 ggaggagaaa gaagtggacg tggcggacgc tctcgttgta gctggcgaca taggtccgct
     3721 ccgggcgcac cacccgctcg atcgcggcca cgcccgcccg gaggatcgga cccagcgccg
     3781 cggcctcggc cgcggtgagc tccccgaggg tctcgcagtg ccgccgcact ttcacgatca
     3841 gctctccggg gtcggtgcgc gggccggcat gatgactgac cagccacagg ccgtcatcgt
     3901 agatcgggcc gccgggggcg gagatccggc cggcgacctg ctcgcagatg ctgcaatgtg
     3961 aatcgggcat cctccgcacg cacccctcca tggtgtccga gtacggtacc cgccgcgtgg
     4021 tgcgcgggga agtgcgtgga ccgaagtcgc ttgacggtct tcagcgcagg gcctagcatt
     4081 cgctttccga gcggcgggca ccggccccgg tgtccgattt ccccgaggtt ccatgcgagc
     4141 tggtctccgg ccgtgttcga cggcttgaaa gcgcggctgg agcgactgct gcgcgagcgc
     4201 ggcggtgccg acccgcgcgc ctatgccgcc ggcctgcgcg atgccctggt ggaggcccgc
     4261 ttcggcctca ccgagatgcg ccgtgcgctc gccgcggcgg agaccgagct tcagtccgag
     4321 cggaagcagc tcgtggatgc ggaacggcgg gggaagctgg cggcggcggt gccggatccc
     4381 gagaccgtgg ccgtggcgga gcggttcgcg gctcgacacc gggagcggat catggtgctc
     4441 gagcggaagg tcgtggttca gcgggacgag ctgcagctgg cggagcggga ggtggaggag
     4501 atgaccgtcc aatggcggac ggcctcccgg agcggtggcg cctcttcggc gtccgtcgat
     4561 gcggcgtggc gggacctgga ggcggccggc gcgacgcgca cgccggagga ccccgaccgc
     4621 atcgccgcgg acctcgaccg gaagaaacgg gaggaggcgg tcgaggccca gctcgcctac
     4681 ctcaagcgca agatgggaaa gggcaaggca tgaatcaccc cccgggccgt tggccgcgct
     4741 cgacgttcct gctgggcctc tcgctgtcgc tggtcacggt ttccggttcc cgtctttccg
     4801 ctcaggtccc caccgaggcc cctccgcacc tccagaagat cgcccacacc tacagcatcg
     4861 tcggctggga ttccgccacc ggcgacctgg gggtcgtggt gcagtccaag ttccccaacg
     4921 tgggcgggat cgttccctgg gcccgggccg gagtcggcgc ggtggcgacc cagagcctga
     4981 gca
//
LOCUS       DASUYN010000205         2436 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1389542, whole genome shotgun sequence.
ACCESSION   DASUYN010000205 DASUYN010000000
VERSION     DASUYN010000205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2436)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2436)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2436
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1389542"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            41..529
                     /locus_tag="VF061_04080"
     CDS             41..529
                     /locus_tag="VF061_04080"
                     /inference="COORDINATES: protein motif:HMM:NF039391.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6265 family protein"
                     /protein_id="HEX6668709.1"
                     /translation="MRVALASTVLLAALTGSPGAVPADPTPPGLAGLAFMAGCWRAPT
                     GDGTTIEEYYTAPSDNLILGVSRYLKGGRVTSYEFTTIAREDSGVVLTPRPSGQAPVP
                     FRLTRLDSTGATWENPAHDFPTLIAYRRGAGDSLVARIEGPGREGRRSTEWRMARATC
                     GR"
     gene            complement(533..1588)
                     /locus_tag="VF061_04085"
     CDS             complement(533..1588)
                     /locus_tag="VF061_04085"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX6668710.1"
                     /translation="MTEKSPSRKVLLVDDDPMMVRLIRKILADNGVTTIAHATSGREA
                     LESLEGVDVVILDHQLPDTSGLEVLEAIRARPHPPAVVLVTAHGNESLAAAALRQGAD
                     DYLAKDVSLNQLLPQVLERVRRMRELRKALVAAEQDLVRAERLAAIGEMTVTLHHEIN
                     NPLMAAFAHVDLLLADPAMDEGARRETLASIRDALHRIRDIVRRIGDLREIRTKTYAT
                     GAPMVDLGDAGAASGIGRGQALLLVTEEHLARVVSLLLRHAGFEVARADDAAHLTQLA
                     AAGRPRLVVAQGGTDAAGAQALSGFVPPAERGYRVVALVSGTGAGALAAGADRVVELP
                     FDPAAFTADILALTATR"
     gene            complement(1599..>2436)
                     /locus_tag="VF061_04090"
     CDS             complement(1599..>2436)
                     /locus_tag="VF061_04090"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HEX6668711.1"
                     /translation="QPNAAILMLTAVNDATSAALCMQRGAVDYLIKPVDLRHVGRAVE
                     TALQKRRARLEGQQRNRRVDEDVALRGAEGRRERTEQERISVATLDALVNALEAKDPY
                     LRGHSARVADLSAGVAAQLGCGDELIEAIRTAGRLHDIGKIGIREEVLHKQGPLTDDE
                     YEHVKQHVLVGSQILAPLVHLQEVITYVRSHHERWDGFGYPDRLSGERIPLGGRIIAA
                     AEIYDALTTARPYQEKMSPDIAVERMRDLVGTVLDPAVHRALEAVVHHRQALVFLDDA
                     TR"
BASE COUNT          320 a          892 c          865 g          359 t
ORIGIN      
        1 cgaacgctag cttcgtcgtt ccaactccgg aggtcgtccc atgcgagtcg cccttgcatc
       61 cacggtcctg ctggcggccc tgaccgggtc gcccggcgcc gtgcctgccg accccacgcc
      121 ccccgggctc gcgggtctcg cgttcatggc cgggtgctgg cgggcaccca ccggggacgg
      181 cacgaccatc gaggagtact acacggcgcc ctcggacaac ctcatcctcg gcgtctcgcg
      241 gtatctcaag ggcggtcggg tgaccagtta cgagttcacc accatcgctc gggaggacag
      301 cggggtcgtg ctcacgccgc gcccgtccgg gcaggcgccg gtcccgttcc gtctcacccg
      361 actcgattcc accggggcga cctgggagaa tccggcccac gattttccga ccctgatcgc
      421 ctaccggcgc ggggcgggcg acagcctcgt ggcgcggatc gagggtcccg gccgcgaggg
      481 ccgacgctcg acggaatggc ggatggcgcg cgccacctgc ggccgctgac cgtcagcggg
      541 tggcggtgag cgcgagaatg tcggcggtga aggcggcggg atcgaaggga agctcgacga
      601 cgcggtccgc gccggccgcc agcgcgccgg cgcccgtacc cgagacgagg gccacgaccc
      661 ggtagccgcg ctccgccggc ggcacgaacc cgctcagcgc ctgggccccg gccgcgtcgg
      721 tcccgccctg ggccacaacc agccgcggcc ggcccgcggc cgccagctgc gtcaggtggg
      781 ccgcgtcgtc ggcccgcgcc acctcgaacc ccgcgtgccg cagcagcagc gagaccaccc
      841 gcgccaggtg ctcctcggtg accaggagca gggcctggcc gcgcccgatc cccgaggcgg
      901 cgccggcgtc acccaggtcg accatcgggg cgccggtggc gtaggtcttg gtccggatct
      961 cgcgcaggtc cccgatccgg cggacgatat cgcggatccg gtgcagcgca tcgcggatgc
     1021 tggcgagcgt ctcgcgccgg gccccctcgt ccatggcggg gtcggccaga agaaggtcga
     1081 cgtgagcgaa cgcggccatc aggggattgt tgatctcgtg gtgcagcgtg accgtcatct
     1141 ccccgatggc ggccagccgc tcggcgcgga ccaggtcctg ctcggccgcc accagcgcct
     1201 tccgcagttc ccgcatgcgg cgcacccgct ccagcacctg cggcagcagc tggttgaggg
     1261 agacgtcctt ggcgaggtag tcgtcggcgc cctggcgcag ggcggccgcc gccagcgact
     1321 cgttcccgtg ggcggtgacc agcacgacgg cgggcggatg cggtcgcgcg cggatcgcct
     1381 cgaggacctc gagcccgctc gtgtccggga gctggtggtc gaggatgacc acgtccacgc
     1441 cctcgagcga ctcgagggcc tcgcgcccgc tggtcgcgtg ggcgatggtg gtgaccccgt
     1501 tgtcggcgag aatcttcctg atcaggcgga ccatcatcgg atcgtcgtcc accaacagga
     1561 ccttccggga aggactcttc tcggtcactg cagcccgatc atcgcgtcgc gtcgtccagg
     1621 aagaccagcg cctgccgatg atgcaccacc gcctccaggg cccggtggac cgcggggtcc
     1681 agcaccgtgc cgaccaggtc gcgcatccgc tccaccgcga tgtcgggcga catcttctcc
     1741 tggtaggggc gcgccgtcgt cagggcatcg tagatctccg ccgccgcgat gatccggcca
     1801 cccagcggga tgcgctcgcc cgagagccgg tcgggatagc cgaatccgtc ccagcgctcg
     1861 tggtgactcc ggacgtaggt gatgacctcc tggagatgca ccagcggggc gaggatctgt
     1921 gagccgacca gcacgtgctg cttcacgtgc tcgtactcgt cgtcggtgag cgggccctgc
     1981 ttgtggagaa cctcctcccg gatcccgatc ttgccgatgt cgtgcagccg gccggcggtc
     2041 cggatcgcct cgatcagctc gtcgccgcag ccgagctggg ccgcgacgcc ggcggagagg
     2101 tccgcgaccc gggcggagtg tccccgcaga tagggatcct tcgcctccag cgcgttcacc
     2161 agcgcgtcca gcgtagcgac ggagatccgc tcctgctccg tccgctcccg ccgcccttcc
     2221 gccccgcgga gggcgacgtc ctcatccacc cgccggttgc gttgctggcc ttcgagtcgg
     2281 gcccggcgtt tctggagggc ggtctcgacg gcgcgcccga cgtggcggag atccaccggc
     2341 ttgatgagat agtcgacggc gccccgctgc atgcagagcg ccgcgctggt cgcgtcgttg
     2401 acggcggtga gcatcaggat cgcggcgttg ggttgc
//
LOCUS       DASUYN010000206         2440 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1610771, whole genome shotgun sequence.
ACCESSION   DASUYN010000206 DASUYN010000000
VERSION     DASUYN010000206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2440)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2440)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2440
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1610771"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..196
                     /locus_tag="VF061_04095"
     CDS             <1..196
                     /locus_tag="VF061_04095"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEX6668712.1"
                     /translation="NLALSKRRAAEAKRFLMQQGIDSTRLETVGYGEEQPLDPSSTEP
                     AWAMNRRADFNVSGGALSQR"
     gene            614..1708
                     /locus_tag="VF061_04100"
     CDS             614..1708
                     /locus_tag="VF061_04100"
                     /inference="COORDINATES: protein motif:HMM:NF015338.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HEX6668713.1"
                     /translation="MRLSRHLLTAVALCAAAACSDAGPPSPFGPEAEPAPEAYHMLDH
                     ELAVMTRNMYVGADVDAVIAALASPDPGDDQAALVAAIATLQQTDFPARAAAIASEIA
                     RTRPHVIGLQEVSRVDITIPPLGVDVHLDFLPAVMAELTALGLEYDVAARVRNIEATP
                     FAGVSLIDEDALLVDRRRVTVQATTAQSFTANLGPVAPGVVLARGWVTAALTVGDRSY
                     TVANTHLESGDLTGLDQLRAAQAAELAQALAGAQNAIVLGDLNDVPGSPMYQVLVGAG
                     LTDVWATLRGQARGYTCCHAPDLSNQVRQFDERIDYVFARLGDGAPVLGQIHRLGSEP
                     SDRFPGPVHGLWPSDHAGLVARLFTVPPQS"
     gene            complement(1710..>2440)
                     /locus_tag="VF061_04105"
     CDS             complement(1710..>2440)
                     /locus_tag="VF061_04105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668714.1"
                     /translation="RDRAAAIADGYRRIGPDFPSMGEHWVSVPQVVRGEVDPRRPPIL
                     EYVTVDGAPALAGVAYTQLVRDRPPRAPLPAPASAWHYHAGSVSEESFILGHARGGEG
                     REPDPGPRVAVLHAWVWLENPAGLFATDNWALPWHRLGITPPPGSAEPTPAGLAAALA
                     TGGRDYFLTLLRLREGLSDKSTGRIAAVLDRKARDWRTRLQAVADRGLPMPAAELSGA
                     WTALEGEIRRICAACTISPRTAHH"
BASE COUNT          338 a          895 c          849 g          358 t
ORIGIN      
        1 caatctcgcg ctgagcaagc ggcgcgcggc ggaagccaag cggttcctga tgcagcaggg
       61 gatcgacagc acccggctgg agaccgtggg gtacggcgag gagcagccgc tggatccctc
      121 gtccaccgag ccggcctggg cgatgaaccg gcgggcggac ttcaatgtga gcgggggcgc
      181 gctctcgcag cgctagtcta cgcccgaccc ctgtcacccc gagcgcagcg aaggggatca
      241 tgcgcggcat ggtccccttc actgcgttcg gggtgacagg tgacacatcc agtccccggt
      301 cacgaccggg taacgccgat gcccgagctt cccggtacct cccaccggag ctcggtatcg
      361 ccactgatgg atcatcccgc tggtggagcc ggatcggcgg cgtcctggtc gtcgcgtacc
      421 tgctggtcct gtttcacgcc ttcgcggcgg cgcgcgccat gctcccgcgg gcgtgctggg
      481 tcgggcggct cgaccgccgc tggaccgacc tgtggatgcg gtgaccccgc cgcagccttg
      541 accgcgcctt gaccgccctc cggtaagctc ggcccacgtt gttctcctcc ccaccgagca
      601 accggagata ccgatgcgac tctcacgcca tctgctcacg gcggtcgccc tgtgcgcggc
      661 cgcggcatgc tccgacgccg gccccccgag cccgttcggc ccggaggccg agcccgcgcc
      721 tgaggcctac cacatgctcg atcacgagct cgccgtcatg acgcgcaata tgtacgtggg
      781 agccgacgtg gacgccgtca tcgcagcgct cgccagtccg gaccccggcg acgaccaggc
      841 cgcgctcgtc gcggcgatcg cgacactcca gcagaccgac tttcccgccc gcgccgcggc
      901 gatcgcgtcg gaaatcgccc ggactcgtcc ccacgtgatc gggctgcagg aggtctcccg
      961 ggtcgacatc acgatcccgc cgctcggcgt ggatgttcac ctcgacttcc tgcccgcagt
     1021 catggccgag cttacggcgc tcggcctcga gtacgatgtg gccgcccgag tccggaacat
     1081 cgaggcgact ccgttcgcgg gcgtgagcct gatcgacgag gatgcgctcc tggtcgatcg
     1141 gcggcgggtg accgttcagg cgacgacggc acagtccttc accgccaatc tcggtcccgt
     1201 tgcccccggc gtggtcctcg cccgcggatg ggtgacggcg gccctgaccg tcggcgatcg
     1261 cagctacacc gtcgccaaca cccatctcga gtccggcgac ctgaccggac tggatcagct
     1321 gcgtgccgct caggccgccg agctggcgca ggcgctcgcg ggcgcgcaga acgccatcgt
     1381 actgggcgat ctcaacgacg tgcccggctc cccgatgtac caggtgctgg tgggcgcagg
     1441 gctgaccgac gtgtgggcga cactccgcgg gcaggcccgg ggctacacct gctgccacgc
     1501 gcccgacctg tccaaccagg tgcggcaatt cgacgagcgg atcgactacg tcttcgcccg
     1561 tctcggggat ggggcgccgg tgctgggcca gatccaccgg ctgggaagtg aaccgtccga
     1621 ccggttcccc ggcccggtcc acgggctctg gccttcggat cacgcggggc tcgtcgcccg
     1681 actcttcacc gtgccgccgc agtcgtgaat cagtggtggg cggtccgcgg cgatatggtg
     1741 caagcggcgc agatgcggcg gatctctccc tcgagcgcag tccaggcccc ggagagctcc
     1801 gccgccggca ttggcagccc gcgatcggcg actgcctgga gccgggtccg ccagtcccgg
     1861 gccttccggt cgagcaccgc agcgatccgg ccggtgctct tgtccgacag cccctccctg
     1921 agacgcagga gcgtgaggaa gtagtcccgg cctccggtgg caagcgccgc cgccaaacca
     1981 gccggtgtgg gctccgcgct gcccggcggc ggggtaatgc cgagccggtg ccacggcagt
     2041 gcccagttgt cggtcgcgaa gaggccggcg ggattctcca gccagaccca ggcgtgcagg
     2101 acggcgaccc ggggacccgg gtccggctcc cgcccttcgc caccacgcgc gtgaccgagg
     2161 atgaagctct cctcgctcac cgatccggcg tggtagtgcc aagcggatgc cggtgccggc
     2221 agcggcgcac ggggcgggcg gtcgcgcacc agctgggtgt aggcgacgcc ggcgagcgcc
     2281 ggcgccccgt ccaccgtcac atactccagg atcggcgggc gccgggggtc cacctcaccg
     2341 cgcacgacct gggggacgct gacccagtgc tcgcccatgc tggggaagtc ggggccgatg
     2401 cgccggtatc cgtcggcaat ggcggcggcg cggtcgcggt
//
LOCUS       DASUYN010000207         2510 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_728136, whole genome shotgun sequence.
ACCESSION   DASUYN010000207 DASUYN010000000
VERSION     DASUYN010000207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2510)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2510)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2510
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_728136"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..564)
                     /locus_tag="VF061_04110"
     CDS             complement(<1..564)
                     /locus_tag="VF061_04110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668715.1"
                     /translation="MTGVRGVLAAALAAGSAAALAGLSQVSWTPEPGPEAMVRLSWRA
                     RGERVEVCRDLSAEELAQLPQHMRRERICEGTTAEYRLRVGVDGDRLVDERVQGSGEV
                     QTRPLFVYRELVLAPGEHRLEVELERVGTTEAEDDDSAGEEDGDAPARGGESAVPRRL
                     AFERTIRLRPREIVLVTYDPERQALVLK"
     gene            complement(561..2138)
                     /locus_tag="VF061_04115"
     CDS             complement(561..2138)
                     /locus_tag="VF061_04115"
                     /inference="COORDINATES: protein motif:HMM:NF012263.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase iron-sulfur subunit"
                     /protein_id="HEX6668716.1"
                     /translation="MNALDASARRVLASLDGALNRLYGWRYNPLYQSGALTVALLLLL
                     IVTGVYLLLFYRVGSPYESVGRITDQVWLGRWIRGLHRYASDAAVVAAALHAFRLFAQ
                     GRRWGPRTLAWISGVVLFGLILVCGWTGYVMVWDGFGQVLATEGARFMDLLPLFSEPI
                     GRAFTGERALGGAFFFLNLFLHIALPIGLGIVLWLHVSRVARPVLLPPRRLMWTLFAL
                     LTAAAVLIPVRMAPEASPYARPEQVPLDVFYAFWLPLTEGRPVWAAWLVGLVATLAVL
                     TVPSWARPAATRRPPASVVDERLCTGCRQCSLDCPYEAIAMLPRTDGRADVVAHVTPA
                     LCVSCGICAGSCAPMGVGPPGRTGRDQLERVRAFVTGRRPGAGDVVVVACTRGAGGIG
                     GSDTVEGCPVLPMQCVGNLHTSVIEYLVRAGAGGVLVAACPLRDCWNREGPRWLEERV
                     YHDREAELKERVDRQRVRIAHAGLRERARIVEALRGFQAEVRALAAAPGEDAIDLLLL
                     CEPEESGAAGAPRDTPP"
     gene            2300..2473
                     /locus_tag="VF061_04120"
     CDS             2300..2473
                     /locus_tag="VF061_04120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668717.1"
                     /translation="MAADQNPVPEPAEPIPFGQRFFDNWPLLMVLGIVIMVVIFTGWG
                     LWEITSLERAPLP"
BASE COUNT          390 a          956 c          863 g          301 t
ORIGIN      
        1 cttcagcacc agggcctgcc gctccgggtc gtaggtgacc agcacgatct cccgcggccg
       61 gaggcggatg gtgcgttcga acgcgaggcg ccggggcacc gcggactctc ccccgcgggc
      121 cggcgcgtcg ccgtcctcct cgccggccga gtcgtcgtct tccgcctccg tggtccccac
      181 ccgctccagc tccacctcga gcctgtgctc ccccggagcc aggaccagct cccggtagac
      241 gaagaggggc cgcgtctgga cttcgccgga gccctgcacc ctctcgtcca ccagccgatc
      301 accgtccacc ccgacgcgca agcggtactc ggcggtggtc ccctcgcaga tccgctcgcg
      361 ccgcatgtgc tgggggagct gggccagctc ctccgccgag aggtcgcgac agacctcgac
      421 ccgctccccg cgggcccgcc aggacagccg aaccatggcc tcggggcccg gctccggggt
      481 ccacgacacc tgcgagaggc ccgcgagggc cgccgccgag ccggccgcga gagccgccgc
      541 cagcacgccg cggacgcccg tcacggtggg gtatcccgcg gagctccggc cgcgccggac
      601 tcctccggtt cgcagagcag gagcaggtcg atggcgtcct cgcccggggc tgcggcgagc
      661 gcgcggacct cggcctggaa cccgcgcagt gcctccacga tcctggctcg ctccctcagg
      721 cccgcgtgcg cgatccggac ccgctggcgg tccacccgct ccttgagctc cgcttcgcga
      781 tcgtggtaca cccgctcctc cagccagcgc gggccttcac ggttccagca gtcccggagc
      841 gggcacgcgg cgaccagcac gccgccggcc ccggcgcgca ccaggtactc gatgacggac
      901 gtatgcaggt tcccgacgca ctgcatgggg agcaccgggc atccctccac ggtatccgat
      961 cctccgattc caccggcgcc acgggtgcac gcgaccacga cgacgtcgcc cgcgccgggc
     1021 cggcgcccgg tcacgaaggc gcgtacccgc tccagctggt cccgcccggt gcggcccggc
     1081 ggcccgaccc ccatcggcgc gcaggagccc gcgcagatcc cgcagctgac gcagagcgcg
     1141 ggggtcacgt gcgccacgac gtcggcccgg ccgtcggtgc ggggcagcat cgcgatcgcc
     1201 tcgtaggggc aatccagcga gcactggcgg cacccggtgc agagccgttc gtccacgacc
     1261 gacgccggcg gccgccgggt cgcggccggt cgggcccagc tgggcaccgt cagcacggcc
     1321 agggtggcca ccagcccgac cagccatgcc gcccacaccg ggcgtccctc ggtgagcggc
     1381 agccagaagg cgtagaacac atcgagcggc acctgctccg ggcgggcgta gggcgacgcc
     1441 tccggtgcca tgcgtacggg gatcaggacc gcggcggcgg tgaggagggc gaacaacgtc
     1501 cacatgaggc gccgcggcgg caggagcacg ggtcgcgcga cccgggagac gtgcagccag
     1561 agcacgatcc cgaggccgat cggcagcgcg atgtgcagga acaggttgag gaagaagaac
     1621 gcgccgccca gggcccgctc gccggtgaac gcgcgcccga tcggctcgga gaagaggggc
     1681 agcaggtcca tgaagcgcgc gccctcggtc gcgagcacct ggccgaagcc gtcccacacc
     1741 atcacgtacc cggtccagcc gcagaccagg atcaggccga agagcacgac gcccgagatc
     1801 cacgcgagcg tgcgggggcc ccagcggcgg ccctgggcga acagcctgaa cgcgtggagg
     1861 gcggccgcga cgacggcggc atcgctggcg taccggtgaa gcccgcggat ccagcggccc
     1921 agccacacct ggtcggtgat gcggccgacc gactcgtagg gcgaccccac ccggtagaag
     1981 agcagcaggt acacaccggt cacgatgagc aggagcagca gcgcgaccgt gagcgcgccg
     2041 ctctggtaga gcgggttgta gcgccacccg tacagccggt tcagcgcccc gtcgagactc
     2101 gcgagcacgc ggcgggccga cgcgtcgagg gcgttcacag tgcgatcatg aagttttatt
     2161 cagacgtcgt gggagtcttg cccgccgatc catcggacaa caattatgta actccgcacg
     2221 aaatgtcacc ccgtcgcgcc cgccggcgcg gcgaccatcc gcccgacggc accgtaccag
     2281 cgtcaacccg gagacgcctg tggccgctga ccagaatccc gttcccgagc cggccgagcc
     2341 cattccattc ggccagcggt tcttcgacaa ctggcccctg ctgatggtcc tcgggatcgt
     2401 catcatggtc gtcattttca ccggctgggg gctctgggag atcacgagcc tcgagcgtgc
     2461 acccctgccc tgaagggatc gccatggaca cccataccgg gatcgagtcc
//
LOCUS       DASUYN010000208         7928 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1610953, whole genome shotgun sequence.
ACCESSION   DASUYN010000208 DASUYN010000000
VERSION     DASUYN010000208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7928)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7928)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7928
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1610953"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..295)
                     /locus_tag="VF061_04125"
     CDS             complement(<1..295)
                     /locus_tag="VF061_04125"
                     /inference="COORDINATES: protein motif:HMM:NF015331.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEX6668718.1"
                     /translation="MASPFQIVERTSTLPVSAEEAFAWHERAGAFERLTPPWERIDVL
                     ERSGGIREGARTAVRVHLGPLRFRWVALHREYVEGRRFVDEQVEGPFSHWIHEH"
     gene            343..855
                     /locus_tag="VF061_04130"
     CDS             343..855
                     /locus_tag="VF061_04130"
                     /inference="COORDINATES: protein motif:HMM:NF012774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HEX6668719.1"
                     /translation="MRRGAFAGFLLVSLGLQSCGPAAGSAATRHESPCVIERIADGDT
                     FTCRDGRRVRLIGIDTPERGQGESGRQARAALSRLAPAGTTVRLERDIAPRDRYGREL
                     AHVWVGSRLVNEALVLEGWAVLYTVPPNVKYAGRLERAQKRARAAGVGLWADGRLDCA
                     PAQYRRGECR"
     gene            complement(892..1992)
                     /locus_tag="VF061_04135"
     CDS             complement(892..1992)
                     /locus_tag="VF061_04135"
                     /inference="COORDINATES: protein motif:HMM:NF014244.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HEX6668720.1"
                     /translation="MGWTITIGRVAGTEIKVHLTFFILVAFWAMAGYRQGGPPGALLA
                     TFSLLALFACVVLHEFGHIRMAARFGVRTPDVILLPIGGVARLERIPDEPRQELLIAL
                     AGPAVTLAIVVVLYVGLTLSGPEPPLWGLEPAGRCLDNPVRAFLENVMRVNLYLLLFN
                     LFPAFPMDGGRVLRALLASRLGLVAGTRIAARLGQASAVLAGFYGLTAGEPILLLVSL
                     FVFLGAGAEASAVETRAAGAGLNAAQMMVTHFRTVPIHATLADAVELLLSGEQREFPV
                     VDNLGRVEGMLTRDHIIKGLSRRGQGSTVGEAMAAQAPLVAPTMSFQESLERLRESGL
                     PALPVVDGSGRLVGVLTMDNITDLLLVRRAGA"
     gene            complement(2062..2748)
                     /locus_tag="VF061_04140"
     CDS             complement(2062..2748)
                     /locus_tag="VF061_04140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668721.1"
                     /translation="MAAPSLISSRRFSGTTRLRLQVLFARAWEALADTYQNQAAEFVR
                     RLKHQLPLEEALDRYFREIGVPAAMSDTVRARALIALASMVEEGTEAPVETPEPTWSP
                     LRPDRLIGALRRRARYVEETNLECRLAASIAEEAVASTHVRMALEVAELLADECTPDE
                     ALMQYVRSFDLPAIDAQLIFRRAMASWAERDPLGLDRVEPVVPTVTICASGAQVDFGS
                     RLRLGLRAAV"
     gene            2956..4929
                     /gene="speA"
                     /locus_tag="VF061_04145"
     CDS             2956..4929
                     /gene="speA"
                     /locus_tag="VF061_04145"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: protein motif:HMM:NF003763.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008792 - arginine decarboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006527 - arginine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HEX6668722.1"
                     /translation="MTVASHYNCPFAPQQEFDIATTVAPPAWTVKDAEKLYNMSGWGL
                     GYFRINAEGHVTVHPDTNRKRGLDLYHLATDLHAQGVGLPLLLRFSDILKSRIEALSG
                     EFSKTIKEFGYEGTYTTVYPVKVNQQRHVVQEIVEFGAPYGVGLECGSKPELQAVLGL
                     NEDTRHLIVCNGYKDEEYMRLALMGQKLGHTVMVVLEQLNELDVLLKVAGEMGVEPTA
                     GVRIKLATEGSGRWAKSGGERSKFGLSAVELMRLLNELDRRGRKEILRLVHFHLGSQI
                     TDIRHVKAGLEEITRYYAELRGMGFDITHVDVGGGLGVDYDGSRSTRPASVNYTMREY
                     ASDVVYTIGTACRTEELPMPHIISESGRALTAHHALLLVNVTDVESLVEPAPPTLGAE
                     PHPLLQEMAENLEALSPERIEEVFHDAIFAKERTQEYFASGVFSLRDKADAEQLYLAT
                     LHALQQAIGDDRASFPEITAHIDSALVDRYFCNFSVFQSLPDNWAIDQLFPIMPIHRL
                     NEPPNRRGTLQDMTCDSDGVIDRFVGGRKGKPSLELHPVTEGEPYILGIFLTGAYQEI
                     LGDLHNLFGDTNAVHVRLTDQGYEVTDLVHGDTVTEVLNYVQFHASDLLATFRRKVGN
                     AKGLSRQEANSFIADFVAGLEGYTYLEEDVGEE"
     gene            complement(5050..7002)
                     /gene="acs"
                     /locus_tag="VF061_04150"
     CDS             complement(5050..7002)
                     /gene="acs"
                     /locus_tag="VF061_04150"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003987 - acetate-CoA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0019427 - acetyl-CoA biosynthetic process
                     from acetate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HEX6668723.1"
                     /translation="MTDQIDTLLSETRRFPTNAEFAARAASTAALYSAGHDWKRFWED
                     QARELDWMALWTRVLDWKPPHAKWFLGGKLNASVNCVDRHLRGPRRNKAAIIWEGEPG
                     EHRVLTYWDLSREVGRCANALKRLGVRRGDRVAIYLPMVPEAAIAMLACARIGAVHSV
                     VFGGFSAEALRDRINDAGAVVLITADGGYRRGQLLPLKRMADTAMADTPTIRHCLVVR
                     RQARAEGDESFAHMTEGRDHWWHRLLDGESPACPPESMDAEDMLFILYTSGTTGKPKG
                     IVHTTGGYLTHVTSTAKHVFDLHDEDVFWCTADIGWVTGHSYVVYGPLANGATVVMYE
                     GAPDWPERDRFWSIVERYGVTILYTAPTAIRAFMKWGTEHPARHDLSTLRLLGTVGEP
                     INPEAWIWYHEHIGRSNCPIVDTWWQTETGGIMITPLPAVVTTKPGSATIPYPGIVPE
                     LVDAKGNRLESGGGFLTIAQPWPGMLRTIFGDDERYREIYWSRFPNRYFTGDGAKLDE
                     DGYWWILGRVDDVLNVAGHRIGTMEVESALVDHPAVAEAAVVGKTHELKGQALAAFVT
                     LKDGNHPTAGLKDDLKAHVTEKIGAIARPDDIFFSADLPKTRSGKIMRRLLKDIAEGR
                     ALGDTTTLADPNVVSRLKEMYEEKEG"
     gene            complement(7007..>7928)
                     /locus_tag="VF061_04155"
     CDS             complement(7007..>7928)
                     /locus_tag="VF061_04155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046912 - acyltransferase activity, acyl
                     groups converted into alkyl on transfer [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="citrate/2-methylcitrate synthase"
                     /protein_id="HEX6668724.1"
                     /translation="TQFLEGFRYDAHPMGVLLGVVGALSTFYPDAKDIHDPENRKLQR
                     VRLLAKAPTIAAFAFRHSRGLPFVFPDNDLDYIANFVNMTFSIGGRHKPNKVLQRALE
                     ILLILHADHEQNCSTSAVRAVGSSHVDPFSAVSAGIAALYGPLHGGANEAVLAMLDEI
                     GDKKNIPAFIKEVKGGGGRLMGFGHRVYKSYDPRAKLIKRVADDVFRETGLNPKLEIA
                     LELERIALEDEYFIKRKLYPNVDFYSGLIYQAMGYPTEYFTVLFALGRMPGWLAQWEE
                     MLLDKDQKIARPRQIYTGKDERPFVPIEKR"
BASE COUNT         1241 a         2712 c         2764 g         1211 t
ORIGIN      
        1 gatgctcgtg gatccagtgg gagaacggcc cttcgacctg ctcgtccacg aaccggcggc
       61 cctccacgta ttcgcggtgg agggccaccc agcggaaccg cagggggccg aggtgcaccc
      121 ggaccgcagt gcgggcgccc tcccggatgc cgccggagcg ctcgagcacg tcgatccgct
      181 cccacggggg cgtgaggcgc tcgaaggcgc ccgcccgctc gtgccaggcg aaggcctcct
      241 cggccgacac cggaagggtg ctggtgcgct cgacgatctg gaatggcgat gccatcgtgc
      301 gcctcttctc ctagattccc gcccatgccg catcttcgtg ccgtgcgtcg tggcgcattc
      361 gccggcttcc tgctggtcag cctgggtctg cagtcgtgcg ggcccgccgc ggggtccgcc
      421 gcgacccgac acgagtcccc atgcgtcatc gagcggatcg cggacggaga caccttcacc
      481 tgccgcgacg ggcgccgagt ccggctcatc ggcatcgaca cgcccgagcg ggggcaaggt
      541 gaatcgggcc gtcaggctcg cgcggccctg agccgcctcg ctccggcggg gaccacggtc
      601 cgcctggagc gagatatcgc gccccgggat cgttacggcc gcgagctggc tcacgtctgg
      661 gtcggctcgc ggctggtgaa cgaggcgttg gtcctggagg gttgggcggt gctctacacc
      721 gtgcccccga acgtcaagta tgccgggcgg ctcgaacgag cgcaaaagcg ggcgcgcgcg
      781 gcaggcgtgg gcttgtgggc cgatgggcgg ctcgactgtg ctccggcgca gtaccggcgg
      841 ggcgagtgtc gctgaccatt cggaggcggc ctggttccac gtgacgcgcc ctcacgcgcc
      901 cgccctccgc accagcagca gatccgtgat gttgtccatc gtgagcactc ccaccagccg
      961 accgctgccg tccaccaccg gcaatgcggg aagcccgctt tcgcggagcc gctccaggga
     1021 ttcctgaaag ctcatggtcg gggccaccag gggagcctgc gccgccatcg cctcgcccac
     1081 cgtggagccc tgccctcgcc ggctcagccc cttgatgatg tggtcgcggg tgagcatacc
     1141 ctccacccgt cccaagttgt ccaccacggg gaactcccgc tgttcgccgg agagaagcag
     1201 ctcgacggcg tccgccagcg tggcgtggat gggcacggtg cggaagtggg tcaccatcat
     1261 ctgcgcggcg ttcagccccg cgcccgctgc ccgcgtctcc accgcggatg cctccgcgcc
     1321 ggcgccgagg aagacgaaga gcgagaccag aaggaggatc ggctccccgg cggtgagccc
     1381 gtagaacccc gcgaggacgg cgctcgcctg gcccagccgg gcggcgatcc gggtgcccgc
     1441 caccagcccc agcctgctgg cgagcagcgc ccgcagcacc cgcccaccat ccatcggaaa
     1501 ggcagggaag agattgaaca ggagcaggta gaggttgacg cgcatcacgt tctcgagaaa
     1561 agcccgcacg gggttgtcga gacaccggcc ggcgggctcg agtccccaga ggggcggctc
     1621 cggtcccgac aacgtgagcc ccacgtacaa gacgacgacg atcgccaggg tcaccgcggg
     1681 cccggcgagc gcgatgagca gctcctgcct cggctcgtcg gggatgcgct ccaggcgggc
     1741 cacgccgccg atgggcagga ggatgacgtc aggggttcgg acgccgaacc gcgcggccat
     1801 ccggatgtgg ccgaactcgt gcagcacgac gcaggcgaac agcgccagca gggagaaagt
     1861 ggcgagcagc gcgccgggcg ggccgccctg ccggtatccc gccatcgccc agaaggcgac
     1921 gagaatgaag aaggtgaggt ggaccttgat ctcggtcccc gccacccgtc cgatcgttat
     1981 ggtccagccc atccgccgtc gcctccgctc cgcccgtcgt cgggctcccc ccaattatag
     2041 gcggagcggg tgcgcggcgg ctcagacggc ggcgcgaagc cccaggcgca gccggctgcc
     2101 gaagtccacc tgcgcgccgc tggcgcagat ggtcacggtc ggcaccacgg gctcgacccg
     2161 gtcgagcccc agcgggtcgc gctccgccca ggaggccatc gcgcggcgga agatgagctg
     2221 cgcgtcgatc gccggcagat cgaaggagcg cacgtattgc atgagcgcct cgtccggggt
     2281 gcactcgtcg gcgagcagct ccgcaacctc gagcgccatc cgcacgtggg tggaggccac
     2341 cgcctcctcg gcgatggacg ccgcgagccg gcactcgagg ttggtctcct ccacgtagcg
     2401 cgcccgtcgc cggagcgcgc cgatcaaccg gtcgggccgg agcgggctcc aggtgggctc
     2461 cggcgtctcc accggcgcct cggtgccctc ctccaccatc gacgccaggg cgatgagcgc
     2521 ccgcgcgcgc accgtgtcgc tcatcgcggc cggcacgccg atctcgcgga aatagcggtc
     2581 cagcgcttct tccagcggaa gctggtgctt cagccggcgc acgaactcgg cggcctggtt
     2641 ctggtaggta tcggcgagcg cctcccaggc gcgggcgaac agcacctgga ggcggagacg
     2701 ggtcgtgccc gagaaacggc ggctcgagat cagactgggc gctgccatgg gacctccaat
     2761 gttctggacg gtggtgcagc ccgctgcttc gggtgcttcg cgggatgcaa cccctggagg
     2821 tgcgagcttc gtgcccgccg gatggcccgg cggccacccg ggaagtcgcg cccggaacgg
     2881 cgcttaccgg ggggtgacgg agcctgcacc ggccccgaga ggagcccttg tcgcggaccc
     2941 gccacgacgc tttccatgac tgtcgcttcc cattacaatt gcccgttcgc ccctcagcag
     3001 gagttcgaca tcgccacaac cgtcgcaccg cccgcctgga ccgtaaagga cgcggagaag
     3061 ctctacaaca tgagcggatg gggcctgggc tacttccgca tcaacgccga gggccacgtc
     3121 accgtgcacc cggacaccaa ccggaagcgc gggctcgatc tctatcacct cgccaccgac
     3181 ctccacgccc agggcgtcgg cctgccgctg ctgctccgct tctccgacat cctgaagtcg
     3241 cggatcgagg ccctctccgg cgagttctcc aagaccatca aggaattcgg ctacgagggg
     3301 acctacacca cggtgtaccc ggtgaaggtc aaccagcagc gccatgtggt gcaggagatc
     3361 gtggagttcg gcgcgccgta cggggtgggc ctcgagtgcg gaagcaagcc cgagctccag
     3421 gcggtgctcg gcctcaacga ggacacccgt cacctcatcg tgtgcaacgg ctacaaggac
     3481 gaggagtaca tgcggctggc cctcatgggc cagaagctgg gccacacggt gatggtcgtg
     3541 ctggagcagc tgaacgagct ggatgtcctg ctcaaggtcg ccggggagat gggcgtggag
     3601 ccgaccgcgg gcgtgcgcat caagctggcg accgaggggt cgggtcggtg ggccaagagc
     3661 ggcggcgagc gctccaagtt cgggctctcc gcggtggagc tgatgcggct cctgaacgag
     3721 ctggaccggc ggggccggaa ggagatcctg aggctggtgc acttccatct ggggagtcag
     3781 atcaccgaca tccgccacgt gaaggccggc ctggaggaga tcacccgcta ctatgccgag
     3841 ctccggggca tgggcttcga catcacccac gtggacgtgg gcggcggact gggcgtggac
     3901 tacgacggct cccgctccac ccggcccgcc agcgtgaact acaccatgcg cgagtacgcc
     3961 agcgacgtgg tctacaccat cggcaccgcc tgccgcaccg aggagctgcc gatgccgcac
     4021 atcatcagcg aatcgggccg agcgctgacg gcgcaccacg cgctgctgct ggtgaacgtg
     4081 acggacgtcg agtcgctggt ggagccggcc ccgcccacgc tgggggcgga gccgcatccc
     4141 ctgctccagg agatggccga gaacctggag gcgctgagcc cggagcggat cgaggaggtc
     4201 ttccacgacg cgatcttcgc caaggagcgc acccaggagt acttcgccag cggcgtcttc
     4261 tcgctgcgcg acaaggcgga cgccgagcag ctctacctgg ccacgctgca cgcgctgcag
     4321 caggcgatcg gggacgaccg cgcctcgttc cccgagatca ccgcgcacat cgattcggcg
     4381 ctggtggacc ggtacttctg caacttctcg gtgttccagt cgctgcccga caactgggcg
     4441 atcgatcagc tctttcccat catgccgatc catcgcctga acgagccgcc gaaccggcgg
     4501 ggcacgctgc aggacatgac ctgcgactcg gacggggtga tcgaccgctt cgtggggggg
     4561 cgcaagggga agccctcgct ggagctccac ccggtgaccg agggcgagcc ctacatcctc
     4621 ggcatcttcc tgacgggcgc ctaccaggag atcctgggcg acctgcacaa cctcttcggg
     4681 gacaccaacg cggtccacgt ccggctcacc gaccagggct acgaggtgac cgacctggtc
     4741 cacggcgata cggtgaccga ggtgctcaac tacgtgcagt tccacgccag cgacctgctc
     4801 gccaccttcc ggcgaaaggt cggtaacgcg aaggggctgt cccggcagga ggccaactcg
     4861 ttcatcgcgg acttcgtggc ggggctggag ggatacacct atctggagga ggacgtgggg
     4921 gaggagtagg ggaacggcgg acgggggcgg aaggcgcggc gttgtcatcc tgagcgcagc
     4981 gaaggaggcc atggaccggc atggcctcct tcgctgcgct caggatgaca tccgtccctg
     5041 aaccgccgtc tagccttcct tctcctcgta catctccttc agccggctca ccacgttcgg
     5101 gtccgccagc gtcgtggtat cccccagcgc ccggccttcg gcgatgtcct tcaacagccg
     5161 gcgcatgatc ttgccgctcc gggtcttggg cagatcggcc gagaagaaga tgtcgtccgg
     5221 ccgggcgatg gcgccgatct tctccgtcac gtgcgccttc aggtcgtcct tgagcccggc
     5281 ggtcgggtgg tttccgtcct tcagcgtgac gaacgccgcc agggcctgtc ccttgagctc
     5341 gtgcgtcttg cccaccacgg ccgcctcggc gaccgcaggg tggtccacca gggcgctctc
     5401 cacctccatc gtgccgatgc gatggcccgc cacgttcagc acgtcgtcca cccgacccag
     5461 gatccaccag tagccgtcct cgtcgagctt ggcgccgtcg ccggtgaagt agcggttggg
     5521 gaagcggctc cagtagatct cccggtaccg ctcgtcgtcg ccgaagatgg tgcgcagcat
     5581 gccgggccac ggctgggcga tggtgagaaa gccgcctccg gactcgagcc ggttgccctt
     5641 ggcatccacc agctcgggga cgatacccgg atacggaatc gtggccgagc cgggcttggt
     5701 ggttaccacg gcggggagcg gagtgatcat gatcccgccg gtctcggtct gccaccacgt
     5761 gtccacgatg gggcagttgc tccgcccgat gtgctcgtgg taccagatcc acgcctccgg
     5821 gttgatcggc tcgcctaccg tgccgaggag ccggagggtc gagaggtcgt ggcgggccgg
     5881 gtgctcggtg ccccacttca tgaaggcgcg gatcgccgtg ggcgcggtgt agaggatggt
     5941 gacgccatag cgctccacga tgctccagaa gcgatcccgc tccggccagt ccggggcgcc
     6001 ctcgtacatc accacggtgg ccccgttggc cagcggtccg tacacgacgt aggagtgtcc
     6061 ggtgacccag ccgatgtcgg cggtgcacca gaacacgtcc tcgtcgtgca ggtcgaacac
     6121 gtgcttggcg gtcgaggtga cgtgggtgag gtagccgccg gtggtgtgga cgatgccctt
     6181 gggctttccc gtggtgccgg aggtgtacag gatgaacagc atgtcctcgg cgtccatgga
     6241 ctcgggcggg caggcgggcg actcgccgtc cagcaaccgg tgccaccagt ggtcccggcc
     6301 ctcggtcatg tgggcgaagg actcgtcgcc ctccgcgcgc gcctgccggc ggacgacgag
     6361 gcagtgccgg atcgtgggcg tgtcggccat ggcggtgtcc gccatgcgct tgaggggcag
     6421 cagctggccc cggcgatagc cgccgtcggc ggtgatcagg acgacggcgc cggcgtcgtt
     6481 gatccggtcc cgcaacgcct ccgccgagaa cccgccgaag acgaccgagt gcacggcacc
     6541 gatccgcgcg caggccagca tcgcgatggc cgcttccggc accatgggga gatagatggc
     6601 gacccggtcg ccccgccgga cgcccagccg cttgagcgcg ttggcgcagc gtccgacctc
     6661 gcgggacaga tcccagtagg tgagaacccg gtgctccccc ggctccccct cccagatgat
     6721 ggccgccttg ttccggcggg ggccgcggag atggcgatcg acgcagttga ccgaggcgtt
     6781 gagcttgccg cccaggaacc acttggcgtg gggcggcttc cagtcgagca cccgggtcca
     6841 gagcgccatc cagtccagct cacgcgcctg gtcctcccag aagcgcttcc aatcgtgacc
     6901 cgcggaatag agtgcggccg tgctggcggc gcgggcggcg aactccgcgt tggtcggaaa
     6961 ccgccgcgtc tcggagagca gggtatcgat ctggtcggtc atggtctcac cgcttctcga
     7021 tcggcacgaa cggccgctcg tccttgccgg tgtagatctg gcggggccgg gcgatcttct
     7081 ggtccttgtc cagcagcatc tcctcccact gggccagcca tcccggcatc cggcccagcg
     7141 cgaagagtac ggtgaagtac tcggtggggt agcccatggc ctggtagatc aggccggagt
     7201 agaagtccac gttgggatag agcttccgct tgatgaagta ctcgtcctcc agcgcgatcc
     7261 gctccagctc cagcgcgatc tcgagcttgg gattgagtcc cgtctcccgg aacacgtcgt
     7321 ccgccacccg cttgatcagc ttggcgcggg ggtcgtacga cttgtacacc cggtggccga
     7381 agcccatcag ccgccccccg ccgcccttca cctccttgat gaacgccggg atgttcttct
     7441 tgtcgccgat ctcgtccagc atggcgagca ccgcctcgtt ggcgccgccg tgcagcggac
     7501 cgtagagcgc ggcgatgccg gcggagacgg cggagaaggg gtccacgtgg gaggagccga
     7561 ccgcgcgcac ggcgctggtg gagcagttct gctcgtggtc ggcgtggagg atcaggagga
     7621 tctcgagcgc ccgctgcagc accttgttcg gcttgtgccg gcccccgatg ctgaacgtca
     7681 tgttcacgaa gttcgcgatg tagtcgagat cgttgtcggg aaagacgaac ggcaggcccc
     7741 gcgagtggcg gaaggcgaag gccgcaatcg tgggggcctt ggccagcagc cgcacgcgct
     7801 ggagcttgcg gttctcggga tcgtggatgt ccttggcgtc ggggtagaag gtggagagcg
     7861 cgcccaccac gcccagcagg acgcccatcg ggtgggcgtc gtagcggaat ccctcgagga
     7921 actgggtg
//
LOCUS       DASUYN010000209         3576 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1391213, whole genome shotgun sequence.
ACCESSION   DASUYN010000209 DASUYN010000000
VERSION     DASUYN010000209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3576)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3576)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3576
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1391213"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..515)
                     /locus_tag="VF061_04160"
     CDS             complement(<1..515)
                     /locus_tag="VF061_04160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668725.1"
                     /translation="MGASHLAAILLAGLTQTSSPDTTPSPYSSPAVQHLVERAMARRR
                     AGDSAVSDYRARIHYRLTVGLGRRRWARVPAAAVEEQVADIQWQRPNDLRVDVRGRRA
                     RFRSELRLSSVWDRPWFVPRSVDDSVRIFSDEFPATGALHPLARGAPGWYRYALAGGL
                     SVTPGPGGTLRL"
     gene            complement(497..916)
                     /locus_tag="VF061_04165"
     CDS             complement(497..916)
                     /locus_tag="VF061_04165"
                     /inference="COORDINATES: protein motif:HMM:NF014950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX6668726.1"
                     /translation="MFSPLAKALLDGFSEGVVVFDADGKLLYANLQAREALAGMDLAD
                     GAPDLQPRLAAMGGRLRPLRVGALELGEAMFIPGVEGPTTLAAREKEAIVKTLDAHNW
                     KLAETARHLGISRTTLWRRLKAYGLHRDGRSKWAQVT"
     gene            complement(1087..>3576)
                     /locus_tag="VF061_04170"
     CDS             complement(1087..>3576)
                     /locus_tag="VF061_04170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEX6668727.1"
                     /translation="LLEREHGEEIRALAASGKGFGIVAGTGTGKTLGIRPIAESILEE
                     PLRVGVVNREREATPETPGWNVVIVTTGIARRWFQDDLITGRDTVIVDEIHQTSAELE
                     LCLALGKRARCRYIWLSATVDPAFYARYLDSAEVLHTYAFDPALKAKVQVLPQTPDEF
                     FHERFVRHIIKERRGVAAFLPTRAEVERLGVELGEQWKRLTTAFYHGGEPIRVIRPFL
                     EGEVERPFLLAMTAAGQSALNVPGLDTVIIYDARYGNVVERGRNVLHRLYLGANEILQ
                     MAGRVHGRVPKGEVFILSDRDLDFASLRPTPPEFQLAGDAERVAITCAALGVDARDLD
                     LPVPLDRVAYRRAVDLLTTRGLIENGRLTAYGREVEALPVERPWGELLVHAGTALLPV
                     VAVCSNIESLHRMTREERDLHGLVANGSDHLTAYNIYAEAVNQHGYVGEVYGLPRHLF
                     EEGLEEWAERRGVLVKAIEDTALGLASVYRSLELPLPKQLPYASKEIRLAWMDLVARV
                     MPFDLVLDEHTAEGQEARVSKTSFAGSWGAVAGALRFFADRFGVARASIEGTTLPYDL
                     VGTYAVVGGAKVVLSGPRKHQRLAVERRRSYFGFELDTEVEPLNGRIPEGLREEGREL
                     LAGLLLAGEVVHPDAGRLKRAVGELDELWRRSGGTVPAVAPDALRARIRAQLDGVESW
                     DDFQRTRLALDPTALVDPETRARLEALPGMVRLRGDAAPVDYELQNGEAVARVRLREG
                     QAKRLRPDEVPALDRPVRFAVQRGRHPPVLADTVTELQALLRKAPRHGREDDGDSRIP
                     PRGRNGGRGRGRGQRGPRQGRTRGGRPGRRR"
BASE COUNT          521 a         1314 c         1235 g          506 t
ORIGIN      
        1 aggcgcaacg tgccgcctgg ccccggggtg accgagaggc cgccggccag cgcgtagcga
       61 taccaccccg gtgcgccccg ggcgagtgga tggagcgcgc cggtcgcggg gaactcgtcg
      121 ctgaagatcc gtaccgaatc gtccaccgac cgagggacga accagggccg atcccagacg
      181 ctcgagagcc tgagctcgga ccgaaaccgg gcgcgccgac cgcgcacatc caccctgagg
      241 tcgttgggcc gctgccactg gatgtccgcc acctgctcct cgacggcggc cgcaggcacg
      301 cgcgcccagc ggcgccgacc gagccccacg gtgaggcggt agtggatgcg ggcccggtag
      361 tcggacacgg cagagtcacc ggcccggcgc ctggccatgg cgcgctcgac caggtgctgg
      421 accgccgggg agctgtaggg ggaaggagtg gtgtcggggg aggaagtctg ggtgagaccg
      481 gccagcagga tcgcggctag gtgacttgcg cccatttgct ccggccgtct cggtgtagcc
      541 cgtacgcctt gagacggcgc cagagggtgg tccggctgat gcccaggtgc ctggccgtct
      601 cggcgagctt ccagttgtgc gcgtcgagtg tcttgacgat agcctccttt tcccgggcag
      661 ccaacgtggt gggaccttcg acgcccggga tgaacatcgc ctcccccagc tccagcgcac
      721 cgacccggag agggcggaga cgcccgccca tggccgccag ccggggctgg agatcgggcg
      781 cgccgtccgc caggtccatc ccggccaacg cctcgcgcgc ctgcaggttg gcgtacagga
      841 gcttgccgtc ggcatcgaac accacgactc cctcgctgaa cccgtccagc agggccttgg
      901 cgagcggcga gaacacggac ggcagggatc cgatagtgag ggcttccggc atgggcgtac
      961 gtacgaaggt aacacacctg gtggtttcag accgcgacgt gccgccgagt atgcgtggcg
     1021 tcacttccat gcccttctag acgcccttta gccccgaaag tgcacattga agcgtccggc
     1081 ccaggctcat cgcctccggc cgggccgacc cccgcgcgtc cgcccctgcc tcggaccccg
     1141 ctgtccccgc ccccttcctc tccccccgtt ccggccccgc ggcgggatcc gggaatcgcc
     1201 atcgtcctcc cgcccgtgcc ggggcgcctt ccgcagcaag gcctggagct cggtgaccgt
     1261 atcggccagg accggggggt gccggccccg ctgaacggcg aatcgcaccg gccgatcgag
     1321 cgcgggcacc tcgtctggtc tgagccgctt ggcctgccct tccctgagtc gcacgcgagc
     1381 cacggcttca ccgttctgaa gctcgtaatc caccggcgcc gcatcgcccc ggaggcgcac
     1441 catgccgggg agcgcctcga gtcgcgcccg ggtctcggga tccaccaggg cagtcggatc
     1501 gagggcgagc cgggtccgct ggaagtcgtc ccagctctcc acgccgtcga gctgcgcccg
     1561 gatccgggcc cgaagcgcgt ccggcgcgac cgccggcacc gtgcctccgg acctccgcca
     1621 gagctcgtcg agctcgccga ccgcccgctt gagccggccg gcgtcgggat gaacgacctc
     1681 gcccgccagg agcagtccgg cgagcagttc ccggccctcc tccctgaggc cctcggggat
     1741 cctcccgttg agcggctcga cctcggtgtc gagctcgaag ccgaagtagc tccgccgccg
     1801 ttcgacggcg agccgctggt gctttcgcgg accggagagc acgaccttgg cgccaccgac
     1861 cacggcatac gtgcccacca ggtcgtaggg gagcgtggtg ccctcgatgg aggcgcgggc
     1921 caccccgaag cggtcggcga agaaccggag cgcaccggcg accgcgcccc agctgccggc
     1981 gaaggaggtc ttggagaccc gcgcctcctg cccctcggcc gtgtgctcgt ccaacaccag
     2041 gtcgaacggc atcacccgcg ccacgagatc catccaggcg agccggatct ccttcgaggc
     2101 gtaggggagc tgcttgggca gcggcagctc gagcgagcgg tagaccgaag ccaggcccag
     2161 cgcggtgtcc tcgatcgcct tcaccaggac gccgcggcgc tccgcccatt cctccaaccc
     2221 ctcctcgaag aggtgacggg ggagcccgta cacctcgccc acgtagccgt gctggttcac
     2281 cgcctccgcg tagatgttgt acgcggtgag gtgatcgctg ccgttggcga ccagcccgtg
     2341 gaggtcccgc tcctcccgcg tcatccggtg gagcgactcg atgttggagc acaccgccac
     2401 gaccggcagc aacgccgtgc cggcgtgcac cagcagctcg ccccagggcc gctccaccgg
     2461 gagcgcctcc acctcgcggc catacgccgt cagccggccg ttctcgatca ggccgcgagt
     2521 ggtgagcaga tccaccgcgc gccggtaggc cacgcggtcg agcgggaccg ggaggtccag
     2581 gtcccgcgcg tccacgccga gcgcggcgca ggtgatcgcc acccgctcgg cgtcgccggc
     2641 gagctggaac tcggggggtg tgggccggag cgacgcgaaa tcgaggtccc ggtcgctcag
     2701 gatgaagacc tcccccttgg gcacccggcc atgcacccgc cccgccatct ggaggatctc
     2761 gttggcgccg agatagaggc ggtgaaggac gttgcggccc cgctcgacga cgttgccgta
     2821 gcgggcatcg tagatgatca cggtgtcgag ccccggcacg ttgagggccg actgccccgc
     2881 ggcggtcatc gcgagcagga aggggcgctc gacctcgcct tcgagaaacg gccggatcac
     2941 ccggatcggc tcgccgccgt ggtagaacgc ggtggtgagt cgcttccact gctcgcccag
     3001 ctcgacgccc agccgttcga cctcggcccg cgtcggcagg aacgccgcca ctccgcggcg
     3061 ctccttgatg atgtgacgga cgaagcgctc gtggaagaac tcgtccggcg tctggggcag
     3121 cacctgcacc ttcgccttga gcgccgggtc gaaggcgtag gtgtgcagca cttccgcgct
     3181 gtccaggtag cgggcgtaga acgcgggatc gacggtggcg ctgagccaga tgtagcggca
     3241 gcgcgcccgc ttgccgagcg cgagacagag ctccagctcg gcggaggtct ggtggatctc
     3301 gtccacgatc accgtgtccc gcccggtgat gaggtcgtcc tggaaccacc gccgcgcgat
     3361 gcccgtggtg acgatgacca cgttccagcc cggcgtctcg ggcgtggcct cgcgctcccg
     3421 gttcaccacg ccgacccgga gcggctcctc cagaatggac tccgcgatcg gccggatccc
     3481 gagcgtcttg ccggtcccgg tcccggccac gatgccgaag cccttgcccg aggcggcgag
     3541 cgcccggatc tcttccccgt gctcgcgctc cagcag
//
LOCUS       DASUYN010000210         2551 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1832710, whole genome shotgun sequence.
ACCESSION   DASUYN010000210 DASUYN010000000
VERSION     DASUYN010000210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2551)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2551)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2551
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1832710"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(125..601)
                     /locus_tag="VF061_04175"
     CDS             complement(125..601)
                     /locus_tag="VF061_04175"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF015769.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEX6668728.1"
                     /translation="MAIVLFRVDDRLIHGQVVVGWGRPLGVNRVVLVDDQVATSAWEQ
                     DLYRMAVTPDIEVEFLTIAQAAASLRDWQSDTRRTLVLTGDLETMAALHRADPVTVHR
                     INLGGIHHKAGRRERLPFLYLTDEEMTRLEALEAAGAAVSAQDLPTTPAVSLKALG"
     gene            complement(601..975)
                     /locus_tag="VF061_04180"
     CDS             complement(601..975)
                     /locus_tag="VF061_04180"
                     /inference="COORDINATES: protein motif:HMM:NF015567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668729.1"
                     /translation="MSEALRGVVVCHGGLAKALVEAAESITGVTGVLRAVSNSGCDRE
                     TLEHRVGEAVDGRPAVVFTDLASGSCLFAVLKHLRTLQGVKVVTGVNLAMLVDFVFHV
                     SLDAGAAAEHAMAAGTKAIRTP"
     gene            complement(968..1930)
                     /gene="hprK"
                     /locus_tag="VF061_04185"
     CDS             complement(968..1930)
                     /gene="hprK"
                     /locus_tag="VF061_04185"
                     /inference="COORDINATES: protein motif:HMM:TIGR00679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HPr(Ser) kinase/phosphatase"
                     /protein_id="HEX6668730.1"
                     /translation="MLRLRDFLSRRGDPLQLEALTGELGLDRQLPDAEVAGPGLALAG
                     YTGRFAPNRLHVFGETEITYLQSLSAEQRRKSLEQFFEFELPCIFVTKGQEVPPEMLE
                     LAKSRGVPLMRSQLKTAEFYRRVKPIVEEAFAPRTTLHGSLADVYGVGLLFVGRSGIG
                     KSECVLDLVERGHRLVADDVVQVIRRGNDILIGRGHELAAHHMEIRGIGLIDIPALFG
                     VRAVRQQKRIEVVVQLEDWETAKDSDRTGLAREETTILDVAVPRVVVPLNPGKNITVI
                     SEVVAMMHLLRYSGVDVAAAFNARLIKRMKEQRGVREYLQEDYE"
     gene            complement(1930..2244)
                     /locus_tag="VF061_04190"
     CDS             complement(1930..2244)
                     /locus_tag="VF061_04190"
                     /inference="COORDINATES: protein motif:HMM:NF014534.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPF/RaiA family ribosome-associated protein"
                     /protein_id="HEX6668731.1"
                     /translation="MQTTITARHCEISDPLRERALTVAGRLGNLANRPIEATVVFDVE
                     GGQQTAELRLHIARGEVLVAKGEAEDHRTALDRAEEKLRKQVEKASAHPRRSRPSQAN
                     PL"
     gene            complement(2267..>2551)
                     /locus_tag="VF061_04195"
     CDS             complement(2267..>2551)
                     /locus_tag="VF061_04195"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024914.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX6668732.1"
                     /translation="GWGITVVEAAACGTPSLASDSPGLRDSVRHMETGYLVPHGDVDA
                     LAARMLELAGNPALVARLGAAARRFAEGLSWERAAAETERHLQDIIAGSA"
BASE COUNT          389 a          918 c          861 g          383 t
ORIGIN      
        1 catccggcga ccagcccgac caccacgggg cgggagagca tcgcctgggg cacactcacc
       61 aggtcgagcc cgacgacggt gccccagatc accatgagga tcgcgctcga gagcgagaaa
      121 tcgatcatcc gagggccttc agggagacgg cgggcgtcgt cggaaggtcc tgggcgctga
      181 ccgccgcccc cgcggcctcc agcgcctcca gtcgggtcat ttcctcgtca gtgaggtaga
      241 gaaacggcag acgctccctc cgcccggcct tgtggtggat gccgcccagg ttgatccggt
      301 ggaccgtgac cgggtcggcg cggtgcagcg cggccatcgt ctccagatcg ccggtgagga
      361 ccagcgtccg gcgagtgtcg gactgccagt cgcgcagact cgcggccgcc tgggcgatgg
      421 tgaggaactc gacctcgata tccggcgtga ccgccatgcg atagaggtcc tgctcccagg
      481 cgctcgtcgc cacctggtcg tccaccagca ccacccgatt gacgccgagc gggcgtcccc
      541 atcccacgac cacctgtcca tggatcagcc ggtcgtccac ccggaacagc acgatcgcca
      601 tcagggagtc cggatggctt tcgtgccggc ggccatggca tgctcggcgg cggcgccggc
      661 gtcgagcgag acgtggaaga cgaagtccac cagcatcgcg aggttgacgc cggtgaccac
      721 cttcacgccc tgaagagtgc ggaggtgctt cagcaccgcg aagagacagg atcccgaggc
      781 gaggtcggtg aagaccacgg ccggccgccc gtccaccgcc tcgccgaccc ggtgctccag
      841 ggtttcgcgg tcgcaaccgc tgttggagac ggcccgaagc accccggtga cgccggtgat
      901 cgattccgcc gcctccacca gggccttggc cagaccgccg tgacacacca cgaccccgcg
      961 caaggcctca ctcatagtct tcctgaagat actcccgaac cccgcgttgt tccttcattc
     1021 gcttgatgag cctggcgttg aacgcggcgg cgacgtccac gcccgagtag cggaggagat
     1081 gcatcatcgc cacgacctcc gagatgaccg tgatgttctt gccggggttg agcgggacga
     1141 ccactcgcgg caccgccacg tcgaggatgg tcgtctcttc gcgggccagc ccggtccggt
     1201 cggagtcctt cgcggtctcc cagtcttcca gctgcacgac gacctcgatc cgcttctgct
     1261 gccggacggc ccggaccccg aagagcgccg ggatgtcgat cagtccgatg ccccggatct
     1321 ccatgtggtg tgcggccagc tcgtgccccc ggccgatcag gatgtcgttg cctcgccgga
     1381 tcacctgcac cacgtcgtcg gccacgagcc ggtgcccccg ctccaccaag tccagcacgc
     1441 actcgctctt cccgatgccg gaccgcccga cgaagagcag accgacgccg tacacgtccg
     1501 ccagcgagcc gtgcagcgtg gtgcggggcg cgaacgcctc ctccacgatc ggcttgacgc
     1561 gacggtagaa ttcggccgtc ttgagctggc ttcgcatcag ggggacgccg cgggatttcg
     1621 cgagctcgag catctcgggc ggcacctcct gccccttggt gacgaagatg cacggcagct
     1681 cgaactcgaa gaactgctcc agcgacttcc gccgctgctc cgccgacagc gactggagat
     1741 aggtgatctc cgtctcgccg aacacgtgga gccggttggg cgcgaagcgg ccggtgtagc
     1801 cggccagcgc caggccgggg ccggcgacct ccgcatccgg cagctggcgg tccagcccca
     1861 gctcgccggt cagcgcctcg agctggagcg gatcgccgcg gcgggagagg aagtcccgga
     1921 ggcggagcat cagagggggt tggcctgcga gggccgggaa cggcgagggt gggccgacgc
     1981 cttctcgacc tgcttccgca gcttctcctc ggcccggtcg agggcggtac ggtggtcctc
     2041 ggcctcgccc ttggcgacga gcacctcacc ccgggcaatg tgcagccgca gctccgcggt
     2101 ctgctgccca ccctccacgt cgaagacgac cgtggcctcg atcggccggt tggccaggtt
     2161 gcccagccgg ccggcgaccg tgagcgcgcg ctcccgaagc gggtcggaga tctcgcagtg
     2221 gcgggcggtg atcgtcgtct gcatgactgt tccctcctga cccggcctag gccgagccgg
     2281 cgatgatgtc ctgtaggtgt cgctccgtct cggcggcggc gcgctcccag ctcagccctt
     2341 cggcgaaccg gcgcgcggcg gcgcccaggc gggcgacgag tgcagggttc ccggcgagct
     2401 ccagcatccg cgcggccagc gcgtccacgt cgccgtgagg tacgagatag ccggtttcca
     2461 tatggcgcac cgagtcgcgc agccccgggc tgtccgaggc gagcgacggg gtgccgcatg
     2521 ccgccgcctc cacgaccgtg atgccccatc c
//
LOCUS       DASUYN010000211         4572 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1612365, whole genome shotgun sequence.
ACCESSION   DASUYN010000211 DASUYN010000000
VERSION     DASUYN010000211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4572)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4572)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4572
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1612365"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..659
                     /locus_tag="VF061_04200"
     CDS             <1..659
                     /locus_tag="VF061_04200"
                     /inference="COORDINATES: protein motif:HMM:NF024829.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HEX6668733.1"
                     /translation="APEGARWPSLGQRLPAGATLGRVSDAQPLTVPMGGTVTAVGARP
                     GEIVEAGQMLLELADHSRPVVRLAWPADAGRPRERVTLVPPGGDATVEAALIGPAPEA
                     DPLTRNPAFLYRARSRWPGAVPGTAVSAVVPEGESVQGVLVPDAAVVQWEGFGWAYVR
                     RDPGEYARVRVPTDQPAQGGWVVGPPLAAGDSVVVTGVQELLSEEFRARVTVGEESGE
                     "
     gene            676..3789
                     /locus_tag="VF061_04205"
     CDS             676..3789
                     /locus_tag="VF061_04205"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX6668734.1"
                     /translation="MLTGLVRGSLRHRGVVLGLAAALVVLGADTLQRAPLDVFPEFAP
                     PQVSIQTEAPGLSPEQVELQVTKPIEDAINGVQGIAAVRSQSIQGLSVVTAVLGERVD
                     IRQARQALAERLGEVAVRLPSTVEPPVLTPLTSSSSTVLVVGITADSVSPMDQRSFVD
                     WVLRPRLLAVPGVSKVAVFGGEVRQLQVQLDPQRLRLHGIGIAEAAEAARRSSGLRGG
                     GVIDQPSQRLTVRTEGQATSPEDLAATVVRERDGVVLRLGDLGRVTHAPETRFGEGGV
                     NGERGLVIVVSGQLGANTKVVAGRVEAALARLRPTIEAAGLELHPALFRPSEFIDLAL
                     RNITTSLLLGAALVAVVLFLFLSDARAAAISLTAIPLSLLAAILTLEYLGFGINTLTL
                     GGLAIALGEVVDDAIIDVENIARRLRLNRASPHPRPAAKVVLEASLEVRSSVVYATFV
                     VALVFVPVLLLTGVQGALFRPLALAYILATLASLVVALSVTPAMTLILLGRRDGRLAE
                     APVLTWLKRRYRRALAWSLPRPALFAGAAVLICGAAAATVPFFGGTFLPEFREGHYLV
                     HMSAVPGTSLDESLRLGQHVTDVLRADPRVRSVAQRIGRAELSEDTWGTHYTEFEISL
                     VPLTGVDAETVEHDLRTLLLGFPGVNFAIRGFLSERIEETLTGSTAELVIRVFGDDLD
                     SLDLAARRVAEAVAAVPGTIDVSYDPPAVTPEVAVRLRPRDAGAAGLRPDEVLEAVEV
                     ATRGVAVAHLVEGNRSTAITVTLLPEARARPEDLRTLPVVSESGRLVELHQVADIART
                     TGRSLIMHVGTRRVQTVTANVAGGDTDGVTRQVESRLAAGVGLPAGVYAEVGGTGTAQ
                     REARRELLLNSLLAGAGILMLLWVAFGETSRLGLVLANLPFALVGGVLAVFATGGILS
                     LGSLVGFVTLFGIATRNAVMLVSHYDHLVWQEGMPWGAETAVRGALERLGPILMTALV
                     TGLGLLPLAIGSGDPGREIEGPMAIVILGGLATSTVLTLFVLPTLALRFGRFAERPHP
                     DAEETAA"
     gene            3786..>4572
                     /locus_tag="VF061_04210"
     CDS             3786..>4572
                     /locus_tag="VF061_04210"
                     /inference="COORDINATES: protein motif:HMM:NF015056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetamidase/formamidase family protein"
                     /protein_id="HEX6668735.1"
                     /translation="MIRVMLVSALLAPAALAAQDTVRYTPTVQQPTFAVREPVLRIRP
                     GTVLVSRTHFGPYYTEAGGAFPGEVGPFYVEGATTKDMLKVEIVKVRPNHGLAASQVY
                     SDFGGLATDSRVRLLNEPIPARRYVWRLDTTRMVGVTDMPRSRVKRMEIDLQPMLGRV
                     AVAPRGQEAFSGLWPGDFGGNMDAQEVRQGTTVYLPIFHDGAYFYFGDGHARQGYGEV
                     AGTGLETSMDVVLRIDVVKGRTIDWPRLEDAEHIMVVGSARPLI"
BASE COUNT          555 a         1655 c         1654 g          708 t
ORIGIN      
        1 cggccccgga aggcgcccgg tggccgtcac tcggccagcg gctcccggcc ggcgccaccc
       61 tcggacgcgt ctccgacgcg cagccgctga ccgtcccgat gggcgggacg gtcaccgccg
      121 tcggcgcccg tccgggcgag atcgtggagg ccggccagat gctcctggag ctggcggacc
      181 actcccgccc ggtggtgcgg ctcgcctggc cggcggacgc ggggcggccg cgggagcggg
      241 tcaccctggt gccccccggc ggggatgcga ccgtggaggc cgcgctcatc gggcccgcgc
      301 ccgaagccga tccgctcacc cgaaaccccg cgttcctgta ccgggcccgc tcgcgctggc
      361 ctggggccgt gccgggcacc gccgtctccg ccgtcgtgcc ggagggcgag agcgtccagg
      421 gtgtgctcgt cccggacgcg gcggtggtgc aatgggaggg attcggctgg gcctacgtgc
      481 gtcgcgatcc cggagagtac gcccgggtcc gggtgccgac cgatcagccc gcgcagggcg
      541 ggtgggtcgt ggggcctccg ctcgcggcgg gggacagcgt ggtcgtgacc ggcgtgcagg
      601 agctgctctc ggaggagttc agggcccgcg tcaccgtggg cgaggaatcg ggcgagtgac
      661 ccgcgcgtcg ccggcatgct gaccgggctc gtccgcggct cccttcgcca tcgcggcgtc
      721 gtgctgggac tcgccgccgc gctggtcgtc ctcggggccg acacgctgca gcgcgcgcca
      781 ctcgatgtct ttcccgagtt cgccccgccc caggtctcga tccagacgga agcgcccggt
      841 ctctcgccgg agcaagtcga gctccaggtc accaagccga tcgaggacgc catcaacggc
      901 gtccagggta tcgccgccgt gcggtcgcaa tccatccagg gactgtcggt cgtgaccgcg
      961 gtgctcggcg agcgggtgga catccggcag gcgaggcagg ccctggccga gcgcctgggc
     1021 gaagtggcgg ttcgactccc ctcgacggtc gagccgccgg tcctcacccc gctgacgtcc
     1081 tcctccagca cggtgctcgt cgtcggcatc actgccgact cggtgtcgcc gatggatcag
     1141 cgctcgttcg tggattgggt gcttcgcccc cggctgctgg ccgtgcccgg cgtctcgaag
     1201 gtggcggtgt tcgggggaga ggtgcgccag ctccaggtcc agctcgatcc ccagcgcctc
     1261 cggctccacg gtatcggcat cgcggaagcc gccgaggccg cgcggcgctc cagcgggctc
     1321 cggggcggcg gggtgatcga ccaaccgagt cagcgcctca ccgtacggac cgagggccag
     1381 gccacctcgc ccgaggacct ggcggcgacg gtggtccggg agcgggatgg cgtggtcctg
     1441 cgcctcggcg atctcggtcg ggtgacccat gccccggaga cccgcttcgg cgagggcggg
     1501 gtcaacggcg agcggggcct ggtgatcgtc gtctccggcc agctgggcgc caacaccaag
     1561 gtcgtggccg gccgggtgga ggccgcgctg gcccggctcc ggcccacgat cgaggccgcc
     1621 ggcctcgagc tgcatccagc gctgttccgc ccctccgagt tcatcgatct ggccctccgc
     1681 aacatcacga cctcgctgct gctcggcgcg gcgctggtgg cggtggtgct gttcctcttc
     1741 ctctcggacg cgcgcgccgc ggcgatctcg ctgaccgcca taccgctctc tctgctcgcg
     1801 gccatcctta ccctggagta cctcgggttc ggcatcaaca cgctgacgct cggcgggctc
     1861 gccatcgcgc tcggtgaagt cgtggacgac gccatcatcg acgtggagaa catcgcccgc
     1921 cgcctgcggc tcaatcgggc gagcccccat ccgcggcccg cggcgaaggt ggtcctcgag
     1981 gcgtcgctgg aagttcgcag cagcgtggtc tacgccacct tcgtggtggc gctggtgttc
     2041 gttccggtgc tgctcctcac gggggtgcag ggcgcgctct tccgccccct cgcgctggcc
     2101 tacatcctcg ccacgctcgc ctcgcttgtg gtcgcgctca gcgtgacgcc cgcgatgacg
     2161 ctcatcctcc tgggccggcg cgacggtcgg ctcgcggagg cgccggtgct gacctggctc
     2221 aagcggcgct accggcgggc gctggcctgg agcctgccgc gacccgcgct gttcgccggc
     2281 gcggcggtgc tgatctgcgg ggccgccgct gccacggtgc cgttcttcgg gggcaccttc
     2341 cttcccgagt tccgcgaggg gcactacctg gtccacatgt cggccgtgcc gggtacctcg
     2401 ctcgacgaat cgcttcggct cggacagcat gtcaccgacg tgctccgcgc cgacccgcgc
     2461 gtccgctccg tcgcgcagcg gatcgggcgg gccgagttgt cggaagacac ctggggcacg
     2521 cactacaccg agttcgagat cagtctcgtc ccgctgaccg gtgtggatgc ggagacggtg
     2581 gagcacgacc tgcgcacgct gctcctgggc ttccccggcg tcaacttcgc catccgcggg
     2641 ttcctctccg agcggatcga ggagaccctg accgggtcca cggcggagct ggtgatccgg
     2701 gtgttcggcg acgatctcga cagtctcgac ctggccgcga ggagagtggc ggaggccgtc
     2761 gccgcggtgc ccggcacgat cgacgtctcc tacgatcctc cggcggtcac accggaggtc
     2821 gccgtccggc ttcgcccccg ggacgcgggt gcggcgggcc tgcggccgga cgaagtgctg
     2881 gaggccgtcg aggtggcgac gcgcggggtg gcggtggccc atctggtcga ggggaaccgc
     2941 tcgacggcca tcaccgtgac gctcctgccc gaggcgcggg ccagaccgga ggacctccgc
     3001 acgctgccgg tggtgtccga gtcgggccga ctggtggagc tgcatcaggt cgccgatatc
     3061 gcccgcacca ccgggcggtc gctgatcatg catgtgggaa cccgccgggt gcagaccgtg
     3121 acagccaacg tcgccggcgg cgataccgac ggggttaccc gccaggtgga gagccgcctc
     3181 gcggccggcg tcggcctccc cgctggcgtc tacgccgagg tcggcggcac cggcacggcg
     3241 caacgcgagg cccgccgcga gctgctgctc aacagcctgc tcgccggagc ggggatcctc
     3301 atgctgctct gggtcgcctt cggcgagacc agccggctgg gcctggtgct ggccaacctg
     3361 cccttcgcgc tggtgggcgg cgtgctcgcc gtgttcgcga ccggcggcat cctgtcactc
     3421 ggctcgctgg tgggcttcgt gaccctcttt gggatcgcca cccgcaatgc cgtgatgctg
     3481 gtctcccact acgaccatct ggtctggcag gaggggatgc cctggggagc ggagaccgcc
     3541 gtccgcggcg cgctggagcg gttgggcccg atcctgatga ccgccctggt caccggcctc
     3601 ggcctgctcc cgctggccat cggcagcggc gaccccggcc gggagatcga agggccgatg
     3661 gccatcgtga tcctcggcgg cctggctacc tccaccgtgc tcaccctctt cgtacttccc
     3721 acgctggcgc tccggttcgg ccggttcgcg gagcgccctc accccgatgc cgaggagact
     3781 gccgcatgat ccgcgtcatg ctggtgtcgg cgttgctcgc gcccgccgcg ctcgcggcgc
     3841 aggataccgt ccggtatacc cccacggtcc aacagcccac cttcgccgtg cgcgagcccg
     3901 tgctccggat tcgcccgggc accgtgctcg tgagccggac ccacttcggc ccctactaca
     3961 cggaggccgg cggcgccttc ccgggcgagg tcggcccgtt ctatgtcgaa ggtgccacca
     4021 cgaaggacat gctgaaggtc gagatcgtga aggtccggcc caaccatgga ctggcggcct
     4081 cgcaggtgta ctccgacttc ggcggactcg ccacggacag ccgcgtccgg ctgctcaacg
     4141 agccgatacc cgcccgacgc tacgtctggc gcctcgacac gacgcgaatg gtcggggtga
     4201 ctgacatgcc gaggagcagg gtgaagcgca tggagatcga tctccagccg atgctcggca
     4261 gggtcgcggt ggctccgcgg gggcaggagg ccttttccgg gctctggccc ggcgacttcg
     4321 gcggcaacat ggatgcgcag gaggtccgcc agggcaccac ggtctatctg ccgatcttcc
     4381 acgacggcgc ctacttctac ttcggcgacg gtcacgccag gcagggctac ggggaggtcg
     4441 cgggcaccgg gctcgagacc agcatggacg tcgtcctccg gatcgacgtg gtgaagggcc
     4501 gcaccatcga ctggccccgc ctcgaggacg cggagcacat catggtggtc ggcagcgcgc
     4561 ggccgctgat cg
//
LOCUS       DASUYN010000212         2355 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_289998, whole genome shotgun sequence.
ACCESSION   DASUYN010000212 DASUYN010000000
VERSION     DASUYN010000212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2355)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2355)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2355
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_289998"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(124..342)
                     /gene="infA"
                     /locus_tag="VF061_04215"
     CDS             complement(124..342)
                     /gene="infA"
                     /locus_tag="VF061_04215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012039277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HEX6668736.1"
                     /translation="MAKEEGIEMEGVVTEVLPDRNYRVMLENGHEILAYAAGKMSKFK
                     IRVLEGDRVSVVLSPYDLTRGRVIYRHK"
     gene            complement(459..2171)
                     /locus_tag="VF061_04220"
     CDS             complement(459..2171)
                     /locus_tag="VF061_04220"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR02289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family oligoendopeptidase"
                     /protein_id="HEX6668737.1"
                     /translation="MPVLALPSTPAALAKARWEDLAPYFDDLAERPLDESTVEGWLQT
                     WSTLEELVTEAAALAMIAYTIDTSDPEKEADHLRFSTEVLPRMEERSVELARRLVESG
                     YRTPELESTLARFRTSIEIFREANVPIFSELEELSARYQRITGSMTVEWEGQDRPLPQ
                     LQPYLKSPDRAVRERAFRAAAGPYLEQRATLASLFDRMYELRQRAARNAGFANFRDYI
                     FPAKFRFDYTPADCARFHEAVEATVAPAVERMLAVRRRRLSLDALRPWDLAVDPYRKA
                     PLRPFATTDEFVSKARAVFERVDPVLGAEFQTMIDEGLLDLDSRKGKAPGGYCETLHH
                     RGRPFIFMNAVGLVDDVMTLLHEAGHAFHAFASHEQPLIWQRHPGSEAAELASMSMEL
                     LAGPHLAQPVGYFTPEDHRSAWLEHLEDVLLSLAHIASVDAFQDWIYTSGQGGEAAAR
                     DAAWLRIRTRFERGVDWSGLDRERVARWYRQLHIFQYPFYYIEYGIAQIGALQVWRNS
                     RRDHPRAVAQYRGALALGAVRGLPDIYRAAGAELTFDAKKLGELVTLVEAEIERVRAE
                     LPVA"
BASE COUNT          371 a          814 c          813 g          357 t
ORIGIN      
        1 cgtcaaggtc aagtaagctc ggacccgaca cggaaacggg ccgccaccat ggcggcccgt
       61 ttctttttcg gggttatggc cccttcgctg cgctcagggt gactcggcta tttcgccgcc
      121 tcgtcacttg tgcctgtaga tgacccgccc gcgggtgaga tcgtagggcg agagcacgac
      181 gctcacgcgg tcgccttcca gcacccggat cttgaacttg ctcatcttcc cggcggcgta
      241 cgccaggatc tcatggccgt tctccagcat gacccggtag ttgcggtcgg gcaggacctc
      301 ggtcacgacg ccctccatct cgatcccttc ttctttcgcc atccacgctc tccgctgcgg
      361 gaaccagctc acacggcacc gtagcccggc gccggccggc agggaatctt gccccgcgcg
      421 gcgccggaag caacatcggg gcacggccgg gcggcggact aggcgaccgg aagctcggcc
      481 cgcacccgtt cgatctcggc ctcgaccagg gtcaccagct cccccagctt cttggcgtcg
      541 aaggtgagct ccgcgccggc cgcccgatag atatccggca ggccgcgcac cgcgccgagc
      601 gccagggccc cgcggtactg ggcgaccgcc cgggggtgat cgcgccggct gttgcgccag
      661 acctggagtg cgccgatctg ggcgatgccg tactcgatgt agtagaaggg atactggaag
      721 atgtggagct gccggtacca gcgggccacc cgctcccggt ccagtccgct ccagtccacc
      781 cctcgctcga agcgggtgcg gatgcggagc cacgcggcgt cccgcgccgc cgcctcccca
      841 ccctgaccgc tggtgtagat ccagtcctga aacgcgtcca ccgaggcgat gtgcgcgaga
      901 ctgaggagga cgtcttccag gtgctcgagc caggcgctgc ggtgatcttc gggggtgaag
      961 tagccgaccg gctgggcgag atgggggccc gccagcagct ccatggacat cgacgccagc
     1021 tccgccgcct cagaccctgg atgccgctgc cagatgagcg gctgctcgtg cgaggcgaac
     1081 gcatgaaagg cgtgtcccgc ctcgtgcagg agcgtcatca cgtcgtccac cagacccacg
     1141 gcgttcatga agatgaacgg ccgcccgcgg tggtgcaggg tctcgcagta gccgccgggc
     1201 gccttgccct tgcggctgtc gaggtccagc agaccctcgt cgatcatggt ctggaactcg
     1261 gcgccgagca ccgggtccac ccgctcgaac accgcgcggg ccttgctcac gaactcgtcg
     1321 gtcgtggcga aggggcggag gggcgccttg cgatagggat ccacggccag atcccagggc
     1381 cgcagcgcgt cgagcgagag ccgccgccgg cgcaccgcca gcatccgctc caccgccggc
     1441 gcgaccgtcg cttccaccgc ctcgtggaac cgcgcgcagt cggccggcgt gtagtcgaag
     1501 cggaacttgg ccgggaagat gtagtcccgg aagttggcga accccgcatt ccgagcggcg
     1561 cgctggcgca gctcgtacat gcggtcgaac agtgaggcga gcgtggcacg ctgctcgagg
     1621 tacggaccgg cagccgcccg gaaggcgcgc tcccgcacgg cgcggtcggg actcttgagg
     1681 tagggctgca gctgcggcag cggccgatcc tgtccctccc actccaccgt catggagccg
     1741 gtgatccgct ggtagcgcgc gctcagctcc tcgagctcgg agaagatggg gacgttggcc
     1801 tcgcggaaga tctcgatcga ggtgcggaag cgggccagcg tgctctccag ctccggcgtg
     1861 cgatagccgg actccaccag ccgccgggcc agctccacgc tccgctcctc catcctggga
     1921 agcacctcgg tggaaaagcg caggtggtcc gcctccttct cggggtccga cgtgtcgatg
     1981 gtgtaggcga tcatggccag cgcggcggcc tcggtgacca gctcctccag cgtggaccag
     2041 gtctgtagcc agccctcgac ggtactctcg tcgagcgggc gctcggcgag atcgtcgaag
     2101 tacggcgcga ggtcctccca gcgcgccttg gcgagggcgg caggagtcga aggaagggcc
     2161 agcacgggca cgacgagctc ctgaaaacgt gagggaaggt cggtcaggag atatagacga
     2221 agacggcgcg ggtcacaatc ccggcggaac cagccggtga aaattcgtgc gctgctgata
     2281 gcgtcggccg atcgcgagca gcaccccctc gccgagggcc cggccggtga gctgcaggct
     2341 ggtgggcagg ccgcc
//
LOCUS       DASUYN010000213         3552 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_68579, whole genome shotgun sequence.
ACCESSION   DASUYN010000213 DASUYN010000000
VERSION     DASUYN010000213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3552)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3552)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3552
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68579"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            364..948
                     /locus_tag="VF061_04225"
     CDS             364..948
                     /locus_tag="VF061_04225"
                     /inference="COORDINATES: protein motif:HMM:NF015147.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LEA type 2 family protein"
                     /protein_id="HEX6668738.1"
                     /translation="MGVCAAATVVACTPLGVWVYDDPGLEVSRVRVEHETSRDPLVLG
                     LAVWNPNDYDVTTARLELQLKVDDVPVGHYSRDSVIPVPQVGLADLTLPLTVPKGQVQ
                     QRIRALSSGTHRFAVEGRATFSTPFGRRKVRFAHEGDLAFRGANEARVATTVASDSLD
                     HRARRGIYAPRLPGVRPTPDQRPQPMYEPRAEPR"
     gene            complement(958..>3552)
                     /gene="dnaE"
                     /locus_tag="VF061_04230"
     CDS             complement(958..>3552)
                     /gene="dnaE"
                     /locus_tag="VF061_04230"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HEX6668739.1"
                     /translation="GKTVRRYDGSPSPPTALPPYRLTASRDAWLRPAADLVRLFPDCP
                     EAVRETEAIAERCRYRIPVGRVVAPRLAEPDASFQRLRALAYAGAERRYGTVAPVTRE
                     RLEHELRIIGQKGFADYFLVVKDIVEHGPTHCGRGSVANSIVSYCLGITHVEPLGAGL
                     LFERFLNPERKDPPDIDLDFPWDERDHVLAYVFRRYPRPQAAMVANHNCFRLRGALRE
                     VAKVHGRPAGEIREVTRRIPIFEDEPLEELLATHPNFQGLDLPPNWRDYARMAAPLVG
                     VPRHLSVHPGGVVIVPTALTDYVPLEPAVKALEDHPDLTVPVIQFEKDGAEDAGLVKI
                     DLLGNRSLAVIRDAIAAVDRNTGHKIDYTTSDVGEDEATRALFRTGQTMGVFYTESPA
                     SRALCAKSRAETFDLLVLNTSIIRPASNRYIRTYLERLHGAPYEPLHPVLRDTLAETF
                     GVMVYQEDVVNVCAVFAGMPLATADGLRKSLSKKRPAKQLAGYAEEFFAGALALGRDP
                     ETIRRVWEMIMSFAGYSFCKGHSASYIQVAQHACYLRAHYPAEFMAAVLANGGGFYHP
                     FAYVAEAMRMGLTVLPPDVNASDFRCTGRGRELRIGLQFVKGLSAEGAERVLRARDGC
                     HPERSEGGHARDGLLRFAQDDTARPRDTARPFRSIFDLQQRTGIAADDLRALVKVGAL
                     DSIADGWTRPMMLWMVDAGQRRSTGDSAAAHGGGDWFDHLPPALPVLRQYSTERRRRE
                     EYGALGFVTDTHPMRLHADRLARLRLCRSTDLPRQVGRHVLLAGMLTTAKPVHTLQDE
                     PMEFATFDDGEGLIETVLFPRVYRERGHVLFDQGPFVFRGKVEEEFGAITVTITHLDR
                     LERAAGKP"
BASE COUNT          545 a         1197 c         1310 g          500 t
ORIGIN      
        1 gccaccggcc gagacctggg ccgacagatc gaggaagggg agtgggagca gtgcgccctc
       61 ctgcacgatc cggaacctgc cgcccttctc cgccacgaag agccgcggat caccggtggg
      121 cgcggtcagg tacagcggga aggcgaggcc ggagaccacc ggctccagcg ccacgggctc
      181 cggtcccgtc ggcagatccg gcgtttcact ttcgaactgc gacccgcacc cactagcgac
      241 ggccgctgga atgagcgaaa gtgctgtttg caacgggaac agggtgggcc accgggaggg
      301 agtccgcagc agcatgcaac gtcctttcat cccctagtgc gcgcgcttcg gaggcgccgg
      361 ctggtgggag tctgtgcggc cgccacggtg gtggcgtgca cgccgctcgg ggtctgggtc
      421 tacgacgatc cggggctcga ggtctcgcgc gtacgggtgg agcacgagac gagtcgcgac
      481 ccgctggtgc taggactcgc ggtctggaac ccgaacgact acgacgtcac cacggcccgg
      541 ctcgagctcc agctgaaggt ggacgacgta ccggtcggcc actactcgcg cgacagcgtc
      601 atccccgtgc cgcaggtcgg gctggccgac ctgaccctcc cgctcacggt ccccaagggg
      661 caggtgcagc agcgcattcg cgcgctgagc tccgggaccc accgcttcgc ggtggaaggc
      721 cgggccacgt tctcgacccc cttcgggagg cggaaggtac ggttcgcgca cgagggcgac
      781 ctggcgttca ggggcgcgaa cgaggcgcgc gtcgccacca ccgtcgcgtc ggactcgctg
      841 gaccatcgcg cgcgccgggg catttacgca ccccgcttgc ccggcgtccg gccgacgccc
      901 gaccagcgtc cccagccgat gtacgagccg cgcgcggagc cgcgctaaag gtagcgccta
      961 gggtttgccc gcggcgcgct ccagccggtc gagatgggta atggtgaccg tgatcgcgcc
     1021 gaactcctcc tccaccttcc cccgaaaaac gaagggcccc tgatcgaaaa ggacgtggcc
     1081 gcgctcgcgg tagacccgcg ggaagagcac ggtctcgatc agtccctctc cgtcgtcgaa
     1141 ggtcgcgaac tccatcggct cgtcctggag ggtgtgcacc ggcttggcgg tggtgagcat
     1201 gccggcgagc aacacgtggc ggccgacctg ccggggaagg tcggtgctgc ggcagagcct
     1261 gagccgggcc agccggtcgg cgtggagccg catggggtgg gtatcggtga cgaaccccag
     1321 cgcgccgtat tcctcgcgac gccggcgctc ggtggagtac tgccggagca cggggagggc
     1381 gggggggagg tggtcgaacc agtcgccgcc gccgtgggcc gcggcggaat ccccggtgga
     1441 ccgacgctgg ccggcgtcca ccatccagag catcatcggc cgggtccagc cgtcggcgat
     1501 ggagtcgagc gcgccgacct tgaccagcgc gcggaggtcg tcggcggcga tgccggtgcg
     1561 ctgctggaga tcgaagatgg agcggaaggg gcgcgcggtg tcacgcgggc gcgcggtgtc
     1621 atcctgagcg aagcgaagga gcccatcccg agcatggccc ccttcgctgc gctcagggtg
     1681 acaaccatcc cgcgcccgca gcacccgctc cgctccctcc gcgctgagcc ccttcacgaa
     1741 ctggagcccg atccgcagct cccgcccgcg cccggtgcag cggaagtcgc tcgcgttcac
     1801 gtccggcggc agcacggtga gccccatccg catcgcttcc gccacgtagg cgaaggggtg
     1861 gtagaacccc ccgccgttgg cgagcaccgc ggccatgaac tccgccggat agtgcgcccg
     1921 caggtagcag gcgtgctgcg ccacctggat gtagctcgcc gagtggccct tgcagaagct
     1981 gtagccggcg aacgacatga tcatctccca cacccgcctg atcgtctcgg ggtcgcggcc
     2041 cagggccagc gcgccagcga agaactcctc ggcgtagccg gcgagctgct tggcgggccg
     2101 cttcttggag agcgacttcc ggagcccgtc ggcggtagcg agcggcatgc cggcgaagac
     2161 cgcgcagacg ttcaccacgt cctcctggta gaccatcacc ccgaaggtct ccgccagcgt
     2221 gtcgcgcagc accgggtgca gcggctcgta gggcgcgccg tgcagccgct caagataggt
     2281 gcggatgtag cggttggagg cggggcggat gatgctggtg ttgagcacca ggaggtcgaa
     2341 cgtctccgcc cggctcttgg cgcagagcgc gcgggaggcg ggcgactcgg tgtagaacac
     2401 gcccatcgtc tgtccggtgc ggaagagcgc ccgggtggcc tcgtcctcgc ccacatcgga
     2461 cgtggtgtag tcgatcttgt gacccgtgtt gcggtccacg gccgcgatcg cgtcgcggat
     2521 cacggcgagc gagcggttgc ccaggagatc gatcttcacc agccccgcgt cctcggcgcc
     2581 gtccttctcg aactggatca ccggcaccgt caggtccgga tggtcctcca gcgccttcac
     2641 cgccggctcc agtggcacgt agtcggtgag cgcggtgggg acgatgacga cgccgccggg
     2701 gtggaccgag agatggcgcg gcacgcccac cagcggcgcg gccatgcgag cgtagtcgcg
     2761 ccagttcggc ggaaggtcga gcccctggaa gttgggatgg gtggcgagca gctcctccag
     2821 cggctcgtcc tcgaagatcg ggatccggcg agtgacctcg cggatctcgc ccgcggggcg
     2881 gccgtgcacc ttggccactt cgcgcagcgc accgcggagc cggaagcagt tgtggttggc
     2941 gaccatggcc gcctggggcc ggggatagcg gcggaagacg taggccagca cgtggtcccg
     3001 ctcgtcccag gggaagtcga gatcgatatc gggcgggtcc ttgcgctcgg gattgaggaa
     3061 gcgctcgaag aggagcccgg cgccgagcgg ctcgacgtgg gtaatgccga gacagtagct
     3121 cacgatcgag ttcgccaccg agccgcggcc gcagtgggtc gggccgtgct ccacgatgtc
     3181 cttcaccacc aggaagtagt cggcgaagcc cttctggccg atgatgcgga gctcgtgctc
     3241 cagccgctcg cgcgtgaccg gggcgacggt gccgtagcgc cgctcggcgc cggcgtaggc
     3301 cagggcccgg agccgctgga acgaggcatc gggctcggcc agccgcggcg ccaccacccg
     3361 gccgacggga atccggtagc ggcagcgctc ggcgatcgcc tcggtctcgc gcaccgcctc
     3421 gggacagtcg gggaagagac ggacgagatc ggcggccggg cggagccagg cgtcgcgtga
     3481 ggcggtaagg cggtaaggcg gtaaggcggt agggggggaa gggctaccgt cgtaccgtct
     3541 taccgtctta cc
//
LOCUS       DASUYN010000214         5718 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_730028, whole genome shotgun sequence.
ACCESSION   DASUYN010000214 DASUYN010000000
VERSION     DASUYN010000214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5718
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_730028"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            172..654
                     /locus_tag="VF061_04235"
     CDS             172..654
                     /locus_tag="VF061_04235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668740.1"
                     /translation="MDPRTSRFADRVASHFEHDGLPPIAGRIFALLLLSDEALSLDQL
                     SEDLGVSKASASTNARLLAKFGVIEPVRRNGSRRDYYRTAGDLFERSMARQLERWREF
                     TELIGEGRRTLRPAAPTVRERLERYEGALSYMTDAIGRAMVRWRGLRAARLVPTGSDR
                     "
     gene            651..2111
                     /locus_tag="VF061_04240"
     CDS             651..2111
                     /locus_tag="VF061_04240"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEX6668741.1"
                     /translation="MSRAAVVSALLLVGCAGTPSVSGVRGASPRPEVPWTPPDGVLPR
                     VAPADTSARAAVPPDVADRIRRLTLAEIVDLGLRSNPATRLAWANAHTAASVYGSERG
                     AWLPSVDADVSAARLKTAASQGRSAVEQSIFTPSVTLNYLLLDFGGRSGRVSGARNRL
                     LSASFRHNAAIQDVVLQIQVAYFQYLGNRALLQAQRTTMEESRTNLVAAEERRRVGLA
                     TVADVLQARTAASQAQLDLQTIEGNVQTTRGALALALGLPANLPYDVDSSAAIAPVAP
                     LADSVNAIIATALQGRPDLAASRAEVEAALAGVTEARGALLPSLGFSATGGRTYATTI
                     PDGANSYSLSLGLTIPIFNGFSRQHDLRAAEFEAEAARARTELLRQEVVFQVFSAYYT
                     LQTATRRVRTAEDLLASASQSNEVALARYKAGVGSVLDLLAAQSALASARAQQVEARL
                     AWSVSLAQLAHDAGVLDPGVESPLRLTPDTTEVPSR"
     gene            2108..3196
                     /locus_tag="VF061_04245"
     CDS             2108..3196
                     /locus_tag="VF061_04245"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX6668742.1"
                     /translation="MSVSRLRALAGLLALALGACKEEALPSSPPVPVTLAAVERRSVP
                     FELLATGTVEPLQTVSVQPQVSGPIVRVAFREGQNVERGQVLFQIDPRPYQATLARAE
                     AILERDKAQEANARQEAARYAGLVEREYVTAQQYDQARTTAAAAAATLAASEAAVQEA
                     RLNLQYATIRAPISGRTGSLRVRQGNLVRANEATPLVTINQIQPILVRFAVPAANLSL
                     IQQRRGETLAVRAEPVGGGPASEGTLSFVDNAVDTTTGTIMLKGTFPNADGALWPGEF
                     VNVRLRLYVDQDALTVPARAVVSGQQGSYVFVVQRDSTAATTPVKVVRQAGDVAVVNG
                     ELEAGQQVVTDGQLRLRQGSKVQVKGAT"
     gene            3193..>5718
                     /locus_tag="VF061_04250"
     CDS             3193..>5718
                     /locus_tag="VF061_04250"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX6668743.1"
                     /translation="MSFTELFIRRPVMTTLVMVGIFIFGLVAYRALPVSDLPAVDYPT
                     ISVDASLPGASPETMASSVATPLEKEFSTIPGIEVMTSTSTQGGTSVSLQFALDRNID
                     GAAQDVQAAISQAMRSLPQGIEPPRFRKVDPSSRPILYYALRSRTLPLPQLNEYAETF
                     LAQRLSTVAGVAQVQVYGSQKYAVRIQLDPQQLAARSIGIDEVARAVQNGSVNLPTGI
                     LWGTDKAYAVESRGQLDNAADFGALSVTYRDGAPVRLRDLGLVVDSVQDTKRASWFNG
                     ERAVVLAIQRQPGTNTVAVAEAVKAEVERLRAQIPPSVEIATLNDRSVTVKASVEDVK
                     FTLYLALCLVVMVIFLFLRNLRATAIPSLALPMSIVATFAVMYLMGYSLDNLSLMALT
                     LAVGFVVDDAIVVLENIVRHIERGEPVMEAAIKGSREITFTVISMTLSLVAVFIPVLF
                     LGGLIGRLFEEFAVTIGVAILVSGFVSLTLTPMLCSRWLKPHDREERHGRFYLAVERA
                     WTTSLRWYERSLGWVMRHRRVALAFSAAILIGTVVLFQVVPKGFIPSEDQGQLYATTE
                     TAEGTSYEAMVQHQQAAAAIVQEDPNIAGFMSSVGGGGRISTVNQGRFFIHLKDRDQR
                     DMSADEVARSLSDKLAAVPGMRVFISNPPVLNIGGRSSKSEYQFTLTSSDLDALYDAA
                     GVLEARMQEIPGLTDVTSDLQVRNPQVQVEIQRDRAAALGIDVNQIESALYNAYGARQ
                     VSTIYTPNDQYWVVMELLPEYQRDLSALNLLHITGRQGVSVPLGSLAQVTPGTGPLTV
                     NHSGQLPSVTLSFDLEPSTSLGTAVQRVEAAAREVLPSTISTSF"
BASE COUNT          832 a         2124 c         1940 g          822 t
ORIGIN      
        1 tcagctacac cgagttcgac ggcgggcacg tcgtcccccc ggacatcgcc cgcgccgccg
       61 cggactggct cctcctgcct gcctgagcgt ccgcccttgg ctttgaccaa cgttcagtcc
      121 atactgaacg aacttgccgt ccgacctccg ccaggaccac ccgggagaac gatggacccc
      181 cgcaccagtc gcttcgccga ccgcgtcgcc tcgcacttcg agcacgacgg actccccccg
      241 atcgccgggc gcatcttcgc cctcctcctc ctgagcgatg aggcgctgag cctggaccag
      301 ctctccgagg accttggcgt cagcaaggcc agcgccagca ccaatgcccg tctgctggcc
      361 aagttcggcg tgatcgagcc ggtgcgccgc aacggaagcc ggcgcgacta ctaccgcacc
      421 gccggcgatc tcttcgagcg ctccatggcc cggcagctcg agcgctggcg ggagtttacc
      481 gagctgatcg gcgagggccg gcgcaccctg cggcctgccg cccccacggt gcgcgagcgg
      541 ctggagcgct acgagggcgc gctcagctac atgaccgacg cgatcggccg cgccatggtg
      601 cggtggcgcg gcctccgcgc cgccaggctg gtccccacgg gatcggatcg gtgagccgcg
      661 ccgccgtcgt atcggcgctc ctcctggtgg ggtgcgcggg gacgccgagc gtctcgggcg
      721 tgcggggagc gtcgccgcgc cccgaggtgc cgtggacgcc gccggacggg gtgctgccgc
      781 gcgtggcccc ggccgacacg tcggcccgcg cggcggtgcc gcccgacgtg gccgaccgca
      841 ttcgccgcct cacgctggcc gagatcgtgg atctcggcct ccggagcaat cccgccaccc
      901 ggctcgcctg ggccaacgcc cacaccgcgg cttcggtcta cggctccgag cgcggcgcgt
      961 ggctcccctc ggtggacgcg gacgtgagcg ccgctcggct gaagacggcc gccagccagg
     1021 gccggagcgc ggtcgagcag tccatcttca cgcccagcgt gaccctgaac tacctgctgc
     1081 tcgacttcgg cggccggagc gggcgggtct ccggcgcgcg caaccggctg ctgtccgcca
     1141 gcttccggca caacgccgcg attcaggacg tggtgctcca gatccaggtc gcctacttcc
     1201 agtacctggg aaaccgcgcg ctgctccagg cgcagcggac caccatggag gagtcgcgca
     1261 ccaacctggt cgcggcggag gagcgccgcc gggtaggtct cgccaccgtg gccgacgtgc
     1321 tccaggcccg gaccgccgcg agccaggccc agctcgacct ccagaccatc gaggggaacg
     1381 tgcagaccac ccgcggcgcg ctggccctgg cgctgggcct gcccgcgaac ctgccgtacg
     1441 acgtggactc cagcgcggcc atcgcgccgg tggcgccgct ggcggacagt gtgaacgcca
     1501 tcatcgccac ggcgctccag ggccggcccg atctcgccgc gagccgggcc gaggtcgagg
     1561 ccgcgctcgc cggcgtcacc gaagcgcgcg gcgcgctgct cccgtcgctc ggcttcagcg
     1621 cgaccggcgg gcggacctac gccaccacca ttcccgacgg cgccaacagc tattccctgt
     1681 cgctcggtct cacgatcccg atcttcaacg gcttctcccg ccagcacgac ctccgcgccg
     1741 ccgagttcga agccgaggcc gcgcgggcgc gcaccgagct gctccggcag gaagtcgtct
     1801 tccaggtctt cagcgcctac tacacgctgc agaccgccac ccggcgggtt cgcaccgccg
     1861 aggatctcct cgccagcgcg agccagtcga acgaggtcgc gctcgcccgc tacaaggccg
     1921 gtgtcggttc cgtgctcgac ctgctcgcgg cccagagcgc gctcgcgagc gcacgggcgc
     1981 agcaggtgga agcgcgtctc gcgtggagcg tgtctctggc ccagctggcg cacgacgccg
     2041 gcgtgctcga ccccggcgtc gagagcccgc tccggctcac ccccgatacc acggaagtgc
     2101 cttctcgatg agcgtctccc gccttcgcgc cctcgccggg ctgctggccc tggccctcgg
     2161 agcctgcaag gaggaggcgc tgccgtcctc gccgccggtg ccggtcaccc tcgccgcggt
     2221 cgagcgccgg tcggtgccgt tcgagctcct ggcgaccggc acggtggagc ccctgcagac
     2281 cgtctcggtg cagccgcagg tgagcggccc gatcgtgcgg gtcgccttcc gcgagggcca
     2341 gaacgtggag cgggggcagg tgctgtttca gatcgatccc cggccctatc aggccaccct
     2401 cgcgcgcgcc gaggcgatcc tggagcggga caaggcccag gaggcgaatg cccgccagga
     2461 ggcggcgcgc tatgccgggc tggtggaacg agagtacgtc accgcccagc aatacgacca
     2521 ggcccgcacc acggcggccg cggccgccgc gacgctggcc gcgagcgagg ccgcggtcca
     2581 ggaggcccgg ctcaatctcc agtacgccac catccgcgcc ccgatctcgg gccgcaccgg
     2641 gagcctgcgg gtccgccagg gcaacctggt gcgggccaac gaggcgacgc ccctggtcac
     2701 catcaaccag atccagccga tcctggtgcg cttcgcggtg ccggcggcga acctgtccct
     2761 cattcagcaa cggcggggcg agacgctggc ggtgcgggcc gagccggtgg gcggcggccc
     2821 ggccagcgaa ggcacgctca gcttcgtgga caacgcggtg gacaccacca ccggcaccat
     2881 catgctcaag gggacctttc ccaacgcgga tggcgccctc tggcccggcg agttcgtgaa
     2941 cgtgcgcctc cggctctacg tggaccagga cgcgctcacc gtccccgccc gggcggtagt
     3001 ctccggccag caggggagct atgtcttcgt ggtgcagcgg gacagcaccg ccgcgaccac
     3061 accggtgaag gtggtgcggc aggccggaga cgtcgccgtc gtcaacggcg agctggaggc
     3121 cggccagcag gtcgtcaccg acggacagct gcggctgcgg cagggatcga aggtccaggt
     3181 caagggggcc acatgagctt caccgagctg ttcatcaggc gacccgtcat gaccacgctg
     3241 gtcatggtgg gcattttcat cttcggcctg gtggcgtatc gcgcgcttcc ggtgagcgat
     3301 ctgcccgcgg tggactatcc caccatctcg gtggatgcca gcctgccggg cgcgagcccc
     3361 gagaccatgg cctcctcggt ggcgacgccg ctggagaagg agttctccac catcccgggc
     3421 atcgaggtga tgacctcgac cagcacccag ggcggcacct cggtctccct gcagttcgcg
     3481 ctcgaccgca acatcgacgg cgcggcgcag gacgtccagg cggccatctc ccaggccatg
     3541 cgctcgctgc cccagggcat cgagccgccc cggttccgga aggtggaccc ctcctcccgg
     3601 cccatcctgt actatgcgct gcgcagccgc acccttccgc tcccccagct caacgagtac
     3661 gcggagacgt tcctggccca gcggttgtcc accgtggccg gagtcgcgca ggtgcaggtg
     3721 tacggctcgc agaagtacgc cgtccggatc cagctcgatc cccagcagct cgccgcgcgc
     3781 agcatcggca tcgacgaggt ggcgcgcgcg gtgcagaacg gcagcgtcaa cctgcccacc
     3841 ggcattctct ggggcaccga caaggcctac gcggtagaga gccggggcca gctggacaac
     3901 gcggccgact tcggcgccct cagcgtcacc taccgcgacg gcgctccggt gcggctccgc
     3961 gacctcggtc tggtggtgga cagcgtccag gacaccaagc gggcgagctg gttcaacggc
     4021 gagcgggcgg tcgtgctcgc gatccagcgg cagccgggca ccaacacggt ggcggtcgcc
     4081 gaggcggtga aggccgaggt cgagaggctg cgggcgcaga tcccgccgtc ggtcgagatc
     4141 gccaccctga acgaccggtc ggtgacggtg aaggcctcgg tggaggacgt gaagttcacc
     4201 ctctacctgg cgctctgcct cgtggtgatg gtgatcttcc tgttcctccg gaacctccgg
     4261 gcgacggcga tccccagcct cgccctgccc atgtccatcg tcgccacctt cgcggtgatg
     4321 tacctcatgg gctacagcct ggacaacctc tccctcatgg cgctcaccct cgcggtgggc
     4381 ttcgtggtgg acgacgcgat cgtggtgctg gagaacatcg tccgccacat cgagcggggc
     4441 gagccggtga tggaggccgc gatcaagggc agccgggaga tcaccttcac ggtgatctcg
     4501 atgacgctct cgctggtggc ggtgttcatc ccggtgctct tcctcggcgg cctgatcggg
     4561 cggctcttcg aggagttcgc ggtcaccatc ggggtggcga tcctggtctc ggggttcgtc
     4621 tcgctgacgc tcacgccgat gctctgcagc cgctggctca agccgcacga tcgcgaggag
     4681 cggcacggcc gcttctacct ggccgtcgag cgagcctgga ccacgtcgct ccggtggtac
     4741 gagcgcagcc tgggctgggt catgcgtcac cggcgggtcg cgctcgcttt cagcgcggcc
     4801 atcctgatcg gcaccgtggt cctgttccag gtcgtgccca agggcttcat cccgagcgag
     4861 gatcagggcc agctctacgc cacgaccgag acggccgagg gcaccagcta cgaggccatg
     4921 gtccagcacc agcaggccgc agcggcaatc gtgcaggaag atcccaacat cgctggattc
     4981 atgtcgtcgg tgggcggcgg cggacgcatc agcacggtca accagggccg cttcttcatc
     5041 cacctcaagg accgcgacca gcgggacatg agcgcggacg aggtggcccg gtcgctctcg
     5101 gacaagctcg cggccgtgcc cggcatgcgg gtcttcatct ccaatccgcc ggtgctcaac
     5161 atcggcgggc gctcctccaa gagcgagtac cagttcaccc tgaccagctc ggacctggac
     5221 gcgctctacg acgccgcggg ggtgctcgag gcgcggatgc aggagattcc cggcctcacc
     5281 gacgtcacca gcgatctcca ggtccgcaac ccgcaggtgc aggtggagat ccagcgcgac
     5341 cgtgcggccg cgctcggcat cgacgtgaac cagatcgaga gcgcgctcta caacgcctac
     5401 ggcgcgcgcc aggtcagcac catctacacc ccgaacgacc agtactgggt ggtgatggag
     5461 ctcctgcccg agtaccagcg cgacctgtcg gcgctgaacc tgctccacat caccgggcgc
     5521 cagggcgtgt ccgtgccgct ggggagcctg gcccaggtga cgcccggcac cggccccctc
     5581 accgtcaacc actccggcca gctcccctcg gtcaccctct cgttcgacct cgagccgagc
     5641 acctcgctcg gtaccgcggt gcagcgggtg gaggcggccg cgcgcgaggt gctgccgtcc
     5701 accatcagca ccagcttc
//
LOCUS       DASUYN010000215        10305 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_511146, whole genome shotgun sequence.
ACCESSION   DASUYN010000215 DASUYN010000000
VERSION     DASUYN010000215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10305)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10305)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10305
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_511146"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..166
                     /gene="rpsC"
                     /locus_tag="VF061_04255"
     CDS             <1..166
                     /gene="rpsC"
                     /locus_tag="VF061_04255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682368.1"
                     /note="forms a complex with S10 and S14; binds the lower
                     part of the 30S subunit head and the mRNA in the complete
                     ribosome to position it for translation; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HEX6668744.1"
                     /translation="GYHEGRVPLHTLRADIDYATSTAKTTYGTIGIKVWIFKGEVIED
                     VSGRTYSTGA"
     gene            172..585
                     /gene="rplP"
                     /locus_tag="VF061_04260"
     CDS             172..585
                     /gene="rplP"
                     /locus_tag="VF061_04260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HEX6668745.1"
                     /translation="MLAPKRIKFRKTFKGRTRGIATRGNTVAFGEFGLMSLDPGWVTN
                     RQIEASRVAMTREMKRGGKVWIRIFPDKPITKKPAETRMGKGKGNPEGWVAVVKPGRV
                     LFEVEGVTEDLAKKALGLAAAKLPVKTRFIKREES"
     gene            589..783
                     /gene="rpmC"
                     /locus_tag="VF061_04265"
     CDS             589..783
                     /gene="rpmC"
                     /locus_tag="VF061_04265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HEX6668746.1"
                     /translation="MKVDEIREMSVEDLKAKIEELTTERFNLRFRSATESIDNPMRFR
                     GIRRDLARLQTILREKESNG"
     gene            776..1045
                     /gene="rpsQ"
                     /locus_tag="VF061_04270"
     CDS             776..1045
                     /gene="rpsQ"
                     /locus_tag="VF061_04270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007628116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HEX6668747.1"
                     /translation="MAEQATEGRARRKVRTGVVTSDKMEKTVTVSLVRRYAHPVYGKQ
                     VTRTKKVKARNEHGAKAGDTVRIMETRPLAKTVSWRVTEIVERAR"
     gene            1049..1417
                     /gene="rplN"
                     /locus_tag="VF061_04275"
     CDS             1049..1417
                     /gene="rplN"
                     /locus_tag="VF061_04275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002460061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HEX6668748.1"
                     /translation="MVQQESILRIADNSGARRALVIRVLGGSKRRYAGLGDTVVVAIK
                     DAIPTGQVKKGDVAKAVIVRTAKETRRKDGSYIRFDENAAVLISDSGEPRATRIFGPV
                     ARELREKRYMKIVSLAPEVL"
     gene            1419..1799
                     /gene="rplX"
                     /locus_tag="VF061_04280"
     CDS             1419..1799
                     /gene="rplX"
                     /locus_tag="VF061_04280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HEX6668749.1"
                     /translation="MKPLVYKKAKRIRRKPPVRQRLHLTKGDTVQVISGDDKGKQGKV
                     LEVFPKTGRIKIQGVNLVKRHLRASPTAEGGIVEREAPIHHSKAMLLDPTSGEPTRVR
                     RRVDADGTVERIAVKSDQPIPRSR"
     gene            1802..2506
                     /gene="rplE"
                     /locus_tag="VF061_04285"
     CDS             1802..2506
                     /gene="rplE"
                     /locus_tag="VF061_04285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HEX6668750.1"
                     /translation="MADEKAKAAKPAKGQPQGQAKGGQQGGGKGKEKGAGGAVDHEPK
                     AREGAPRLHTYYLDTVRPRLAKEFGLPNPNQVPRLEKIVLNVGMGDASKNPKQLESAV
                     EELSAITGQKAVITRAKKAIANFNLRAGMPVGAFVTLRGARMYEFLDRFITLSIPRIR
                     DFRGLPTRSFDGRGNYTFGIREQMIFPEIDYDKVEKIHGMDITIVTSTDRDDLAMALL
                     RELGWPFRGETPQKVA"
     gene            2624..2805
                     /locus_tag="VF061_04290"
                     /pseudo
     CDS             2624..2805
                     /locus_tag="VF061_04290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599304.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            2819..3214
                     /gene="rpsH"
                     /locus_tag="VF061_04295"
     CDS             2819..3214
                     /gene="rpsH"
                     /locus_tag="VF061_04295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HEX6668751.1"
                     /translation="MNLTDPVADMLTRIRNACSAGHRRVDIPVSKLKTEVARLLRDNH
                     YIADYKLLDDGQHGVLRLYLKYHNESPVIRELRRVSTPGLRRYVKCRELPRVKNGLGM
                     AIVSTPKGLMTDREARSANLGGELLAVVW"
     gene            3223..3762
                     /gene="rplF"
                     /locus_tag="VF061_04300"
     CDS             3223..3762
                     /gene="rplF"
                     /locus_tag="VF061_04300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008372550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HEX6668752.1"
                     /translation="MSRIGKKPVTLPKGVNLDLQGNSVAVKGPKGELRRTLHPEMKLT
                     LADGTFTVERPSEDKRHKALHGLTRTLVQNMVEGVSKGFIKTLEIQGVGYKAEAKPYG
                     VNLIVGYSHPVKYEAPKGIKISVENNTVVKVEGADKEVVGQVAAELRSVRPPEPYKGK
                     GIRYQGEQVRRKAGKTGAK"
     gene            3764..4135
                     /gene="rplR"
                     /locus_tag="VF061_04305"
     CDS             3764..4135
                     /gene="rplR"
                     /locus_tag="VF061_04305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HEX6668753.1"
                     /translation="MRRIHAPKTRSQLRYRRHLRVRSKVAGTAERPRLVVFRSLKHIY
                     AQLVDDDRGVTLLGVSDGSEGIAVDGAGKVARGKAVGTLLAEKAKTAGVSRVVFDRAG
                     YRYHGRVQAVAEGAREGGLEF"
     gene            4351..4836
                     /gene="rpsE"
                     /locus_tag="VF061_04310"
     CDS             4351..4836
                     /gene="rpsE"
                     /locus_tag="VF061_04310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004106339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HEX6668754.1"
                     /translation="MENVIAINRVAKVVKGGRRFSFNALVAVGDGKGKVGIATGKANE
                     VSEAVRKAVDAAKRSMVELPKTGSTIPHEVVGQHGAGRVLLKPAATGTGVIAGGPVRA
                     VLECAGITDILTKSLGSTNPHNMVRATMNGLTSLVSARQVARERGVELDQIAYKPRQG
                     A"
     gene            4838..5095
                     /gene="rpmD"
                     /locus_tag="VF061_04315"
     CDS             4838..5095
                     /gene="rpmD"
                     /locus_tag="VF061_04315"
                     /inference="COORDINATES: protein motif:HMM:TIGR01308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HEX6668755.1"
                     /translation="MGRNPAVGRQGPRHHAAVIPSEDTAKALEVKQIRSTIGHPETMR
                     RTLAALGLRRHQQTVRVANTASARGMLFKVRHLVEVKPAAK"
     gene            5217..5651
                     /gene="rplO"
                     /locus_tag="VF061_04320"
     CDS             5217..5651
                     /gene="rplO"
                     /locus_tag="VF061_04320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HEX6668756.1"
                     /translation="MTLSSLSPSRGSTQARKRVGRGPGSGLGKTAGKGHKGHKARTGG
                     STNPGFEGGQMPMYRRLPKRGFTNPFKVTAQAVNLSQLKKVSATEVSPETLYSAGLIG
                     KVDRPVKLLGTGDADRSYTVRGVSLSASARAKIEAAGGKIEG"
     gene            5652..6968
                     /gene="secY"
                     /locus_tag="VF061_04325"
     CDS             5652..6968
                     /gene="secY"
                     /locus_tag="VF061_04325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HEX6668757.1"
                     /translation="MTTPRVPNLAIDDELKRKLLFTLGILVIYRIGAHIAAPGVNVTA
                     LADFIRNSAAAGFFGLYDALGGGLSRATVFALGIMPYISASIIFQLAGGIAPSIGKMQ
                     KDEEGKKKITQWTRYLTVAIALSQAYTFALFTESIPGAVPEPGFASRLIMVVTLTAGA
                     IFVMWLGEQITERGIGNGMSLLITFSILERLWPGALQLLQFVQTGVVSAIGAVAFLAI
                     LVLIIAAVVAMTIAARRIPIQIPRKVMGRGRIREGQKTFIPIRLITAGVMPIIFAQTI
                     IIVPGTLASFTQNAVLQDLAGFFNPGDWPYNLTFAAMILVFSYFYTSIIFNSVDLAEN
                     LKKQGGFIPGVKPGASTADYIDGVLGRITLPGGLFLATIAILPILVSQWFNIPTSGFG
                     GTSVLIVVGVLLDTIAQVEQHRTLRKYDGFMKTGRVKFRGRQQRYM"
     gene            7073..7636
                     /locus_tag="VF061_04330"
     CDS             7073..7636
                     /locus_tag="VF061_04330"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: protein motif:HMM:NF001381.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0019205 - nucleobase-containing compound
                     kinase activity [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HEX6668758.1"
                     /translation="MDILLLGPPGAGKGTQGAILGRAMGLPKFATGDLLRDAVKRGTP
                     LGQQAKAVMEAGHLVGDDIILGVVREEVGKPEAAKGVIFDGVVRTIPQAEGLERILAE
                     KKRKMDAVLFFDVTDEEILARLERRRTVEGRADDDPVAVATRLRAYREQTAPVLEWYE
                     RRGGVKRIPAVGTVDEIAARVRDALGR"
     gene            7633..8385
                     /gene="map"
                     /locus_tag="VF061_04335"
     CDS             7633..8385
                     /gene="map"
                     /locus_tag="VF061_04335"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HEX6668759.1"
                     /translation="MITLKSAREIEIMAKAGRIVAGTLALMREIVRPGMTTEDLDAAA
                     EAYIRGHAGAVPSFKGLYGFPKTLCTSIDEEIVHGIPSPRRVLAEGSIVSVDVGVQLE
                     GLHADSATTIPVGEVAPEAERLMEVTRESLTAAIGQARLGNHVGDIGHAVQKVAEGAG
                     FGVVRELVGHGIGTRFHEEPQVPNYGSPRRGPRLLEGMTLAIEPMITLGSPATRTLND
                     KWTVVTADGSLSAHFEHTVAITANGPRILTTA"
     gene            complement(8388..9032)
                     /locus_tag="VF061_04340"
     CDS             complement(8388..9032)
                     /locus_tag="VF061_04340"
                     /inference="COORDINATES: protein motif:HMM:NF016825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclodeaminase/cyclohydrolase family protein"
                     /protein_id="HEX6668760.1"
                     /translation="MPDPTSPTRTASLNDWARLIARPTIAPGGGSAAAAAGVLAAAVV
                     EMVAGLTAAREAYAPVHEEARAARARAEGLRQELLTLASADAEALLRLGEALALPRTS
                     DSERQLRERRKRAALQDAAEIQRDVLAGCAELAALGAAMVERGLRSAQADAATAVFLA
                     VASARSAARAVATNLEGEPADSEFAGVARAVPQKLAEAEEAERAALHLLGQPTG"
     gene            complement(9098..9889)
                     /locus_tag="VF061_04345"
     CDS             complement(9098..9889)
                     /locus_tag="VF061_04345"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008934 - inositol monophosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006020 - inositol metabolic process
                     [Evidence IEA];
                     GO_process: GO:0046855 - obsolete inositol phosphate
                     dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HEX6668761.1"
                     /translation="MVSSLDLLHLARTAAERAASYLRGVERPADPAGWSLKGSRDFVT
                     EVDRTAERLVSEVLLSAEPGSRIVGEELQPEVVTEGLVWIVDPLDGTTNFLHDFPSYA
                     VSVAGAVDGALEVAAVVNVPTGQTYTASSGGGAWHGERRLTVSAIADPAFALIGTGFP
                     FKDTSRISEYLEQFRRVAGRTSGIRRPGAASLDLVDVAAGRFDGFWEQYLSAWDIAAG
                     VLLIREAGGVVTDLSGREVGIEHTGLVAGNPVIHAWLLDTLASTR"
     gene            9891..>10305
                     /locus_tag="VF061_04350"
     CDS             9891..>10305
                     /locus_tag="VF061_04350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HEX6668762.1"
                     /translation="MLALREPGNLPGMARIFSGIQPSGELHIGNWLGAVQNWVNLQHS
                     YDCIFCVVDLHAITGKYDQGSLAARTREMAIGLLACGIDPARAVLFVQSHVPEHSELQ
                     WLLNTVTPIGELERMTQFKDKSQRFESVPAGLLNYP"
BASE COUNT         1816 a         3461 c         3611 g         1417 t
ORIGIN      
        1 ggggtatcac gaggggcggg tgcccctgca cacgctgcgg gcggacatcg actacgccac
       61 cagcaccgcg aagacgacct acggcaccat cgggatcaag gtctggatct tcaagggcga
      121 ggtgatcgag gacgtgtccg gccgcaccta tagcacgggg gcctgaggcc gatgctggcg
      181 ccgaagcgaa tcaagttccg caagaccttc aagggccgga cccgcggcat cgccacccgg
      241 ggcaacaccg tggcgttcgg cgagttcgga ctgatgagcc tggatccggg ctgggtcacc
      301 aaccggcaga tcgaggcctc ccgcgtggcc atgacccgcg agatgaagcg cggcggcaag
      361 gtgtggatcc ggatcttccc ggacaagccg atcaccaaga agccggccga gacccgcatg
      421 ggcaagggta agggcaatcc cgagggctgg gtggcggtgg tcaagccggg ccgggtgctc
      481 ttcgaggtgg agggcgtgac cgaggacctg gccaagaagg cgctcgggct ggccgcggcc
      541 aagctcccgg tcaagacgcg cttcatcaag cgcgaggaga gctgagcgat gaaggtagac
      601 gagatccggg agatgtcggt cgaggacctg aaggcgaaga tcgaggagct caccaccgag
      661 cgcttcaacc tccgcttccg ctcggccacc gagtcgatcg acaatccgat gcgcttccgg
      721 ggcatccggc gcgacctcgc gcggctgcag acgatcctgc gggagaaaga gtccaatggc
      781 tgagcaggcg accgaaggcc gcgcccgccg gaaggtgcgc accggcgtgg tgacgagcga
      841 caagatggag aagaccgtca ccgtgtccct ggtgcggcgc tacgcccatc cggtgtacgg
      901 caagcaggtc acccggacca agaaggtgaa ggcccggaac gagcacggcg ccaaggccgg
      961 cgacaccgtc cggatcatgg agacccgtcc gctggccaag acggtgagct ggcgggtgac
     1021 cgagatcgtc gagagggcga gataagccat ggtgcaacag gaatcgatcc tccggatcgc
     1081 cgacaactcg ggcgcccgcc gcgcgctggt gatccgcgtg ctgggcggca gcaagcggcg
     1141 ctacgccggc ctgggcgaca ccgtggtggt ggcgatcaag gacgccatcc ccaccggcca
     1201 ggtgaagaag ggcgacgtcg ccaaggcggt gatcgtgcgg acggccaagg agacccgacg
     1261 gaaggacggc tcctacatcc ggttcgacga gaacgccgcg gtgctgatca gcgactcggg
     1321 cgagccgcgg gccacccgca tcttcggccc ggtggcgcgc gagctgcgcg agaagcggta
     1381 catgaagatc gtgtcgctcg cgccggaggt gctctagcat gaagccgctg gtatacaaga
     1441 aggccaagcg gatccgccgg aagccgccgg tgcggcagcg actgcacctc accaagggcg
     1501 ataccgtcca ggtgatctcg ggcgacgaca aggggaagca ggggaaggtg ctcgaggtct
     1561 tccccaagac cgggcggatc aagatccagg gcgtcaacct ggtgaagcgg cacctccgcg
     1621 ccagccccac ggccgaaggc gggatcgtgg agcgcgaggc gccgatccat cactcgaagg
     1681 cgatgctgct cgatcccacc agcggtgagc cgacccgcgt gcggcggcgc gtcgatgccg
     1741 acgggacggt cgagcggatc gccgtgaagt cggaccagcc gattcccagg agccggtgac
     1801 gatggcggac gagaaggcga aggcggccaa gcccgccaag gggcagcccc agggacaggc
     1861 caagggcggc cagcagggcg gcggcaaggg gaaggagaag ggcgccggcg gagcggtcga
     1921 tcacgagccc aaggcccgcg agggcgcgcc gcggctgcac acctactacc tggacacggt
     1981 ccggccgcgg ctggccaagg agttcggcct tcccaacccg aaccaggtgc cgcggctgga
     2041 gaagatcgtg ctcaacgtgg gcatgggcga cgccagcaag aaccccaagc agctcgagtc
     2101 ggcggtcgag gagctgagcg cgatcaccgg acagaaggcg gtcatcaccc gggccaagaa
     2161 ggcgattgcg aacttcaacc tccgggccgg catgccggtg ggcgcattcg tgacgcttcg
     2221 cggggccagg atgtacgagt tcctggaccg gttcatcacc ctgtcgatcc cccgcatccg
     2281 cgacttccgc gggctgccga cccggagctt cgacggccgg gggaactaca ccttcgggat
     2341 ccgggagcag atgatctttc cggagatcga ttacgacaag gtggagaaga tccacggcat
     2401 ggacatcacc atcgtgacgt ccaccgaccg ggacgacctg gcgatggcgc tcctccggga
     2461 gctgggatgg ccgttcaggg gcgagacgcc acagaaggtg gcgtaggacc gaaaagcgtg
     2521 gaaggtgaaa agtgaaaggt gaaagggatc gtcgatcccg catcttcacg cttctccttt
     2581 tcacttttca cttttcactt ttcacgtagt tgaggaacga tggcaaagac tgcctggatc
     2641 gagcgggcca agcgtactcc gaagttcaag gtgcgggggg tacggcgctg ccagcgctgc
     2701 ggccgcgccc gcgcggtgct gcggaagttc ggtctgtgcc gcatctgttt ccgtgagctc
     2761 gccttgaggg gagaaatccc gggcgtgcgc aaggccagct ggtaagggga acgagggaat
     2821 gaatctcaca gatcccgtcg cggacatgct gacccgcatc cgcaacgcgt gctccgcggg
     2881 gcaccggcgc gtggacattc cggtgtccaa gctgaagacc gaggtcgccc ggctgctgcg
     2941 ggacaaccac tacatcgcgg actacaagct cctcgatgac ggccagcacg gcgtgctgcg
     3001 gttgtacctg aagtaccaca acgagtcccc ggtgatccgg gagctgcggc gcgtctcgac
     3061 gccggggctg cggcgctacg tcaagtgccg cgagctgccc cgggtcaaga acgggctcgg
     3121 gatggcgatc gtctcgaccc ccaaggggct gatgaccgat cgcgaggcgc gcagcgcgaa
     3181 cctcggcggc gagctcctcg ccgtggtctg gtaggaggcg cgatgtcgcg tatcggcaag
     3241 aagccggtca ccctccccaa gggcgtgaac ctggatctcc agggcaactc cgtggcggtg
     3301 aagggaccca agggcgagct ccggcggacg ctgcatccgg agatgaagct caccctggcc
     3361 gacggcactt tcacggtcga gcggcccagc gaggacaagc gccacaaggc gctccacggg
     3421 ctcacccgga ccctggtcca gaacatggtc gagggcgtct ccaagggctt catcaagacc
     3481 ctcgagatcc agggcgtcgg gtacaaggcg gaggccaagc cctacggggt gaacctcatc
     3541 gtcgggtact cgcacccggt gaagtacgag gcccccaagg gcatcaagat ctcggtcgag
     3601 aacaacaccg tggtcaaggt cgagggcgcc gacaaggaag tggtcggcca ggtcgcggcg
     3661 gagctgcgct ccgtgcggcc gccggagccc tacaagggga agggcatccg ctaccagggt
     3721 gagcaggtcc gccgcaaggc gggcaagaca ggagccaagt aacatgcgcc ggattcacgc
     3781 gcccaagacg cgcagccagc tccgctaccg gcgccacctc cgggtgcgca gcaaggtggc
     3841 gggcacggcg gagcgtccgc ggctggtggt gttccgctcg ctcaagcaca tctacgccca
     3901 gctggtggac gacgaccgcg gcgtgaccct cctcggcgtg agcgacggga gcgagggcat
     3961 cgcggtcgac ggggcgggca aggtggcccg cggcaaggcg gtcggcacgc tgctggcgga
     4021 gaaggcgaag acggccggag tcagccgggt ggtgttcgat cgcgccggct accgttacca
     4081 tggtcgcgtc caggcggtgg ccgagggcgc gcgcgaaggc ggattggagt tctaatggcg
     4141 gacgagacga cgcagaccgg cggacaggcg acggcgaccg acgccggcga ggcagcgccg
     4201 gcggcggagc agcaacagca gcagcagcag cagcaacagc ggcccggctc cgaccgaccc
     4261 cgcggccggg gtgggcgcgg cggaggcgag cgcggcggcc gcggcggtcc ccgccgggac
     4321 cggggcgacc gcgagcacgc cagcgaccac gtggagaacg tcatcgccat caaccgcgtg
     4381 gccaaggtcg tgaagggcgg ccggcggttc tccttcaacg ccctcgtcgc cgtcggcgac
     4441 ggcaagggca aggtgggcat cgccaccggg aaggccaacg aggtctccga ggcggtccgc
     4501 aaggcggtgg acgcggccaa gcgctcgatg gtggagctgc ccaagaccgg ctcgaccatc
     4561 ccccacgagg tggtgggcca gcacggcgcc ggacgggtgc tgctcaagcc cgccgcgacc
     4621 ggcacgggcg tgatcgccgg aggtccggtg cgcgcggtgc tcgagtgcgc gggcatcacc
     4681 gacatcctga ccaagagcct cggctccacc aacccgcaca acatggtgcg ggccacgatg
     4741 aacgggctca ccagcctggt ctccgcgcgc caggtggcgc gggagcgcgg ggtggagctc
     4801 gaccagatcg cctacaagcc gcggcaggga gcctgagatg ggtcggaatc cggcagtcgg
     4861 gcggcagggc ccccgacacc acgcggccgt catccccagc gaggacacgg cgaaggcgct
     4921 cgaggtgaag cagatccgct ccaccatcgg ccaccccgag accatgcggc ggacgctggc
     4981 ggcgctgggg ctccggcggc atcagcagac ggtgcgggtc gcgaacaccg cgtccgcccg
     5041 cggtatgctg ttcaaggtcc ggcacctggt cgaggtgaag ccggcggcta agtaacagcg
     5101 caaaaggtga aaagtgaaaa gtgaaacgga gggctcgatc cccttttcac tgtttacttt
     5161 tcactcttca cgcttttcag cagctcacgc attcggagta accgatggct gacaagatca
     5221 ccctctcctc gctgtccccg agccggggct ccacccaggc gcgcaagcgc gtcgggcggg
     5281 ggccgggctc cgggctcggc aagacggccg ggaagggcca caagggccac aaggcgcgca
     5341 ccggcggctc gaccaacccc gggttcgagg gcggtcagat gccgatgtac cggcgcctgc
     5401 ccaagcgcgg gttcaccaat ccgttcaagg tgaccgcgca ggcggtgaac ctctcgcagc
     5461 tcaagaaggt gagcgcgacc gaggtgagcc ccgagacgct ctattcggca ggactgatcg
     5521 gcaaggtgga ccggccggtg aagctcctgg gcaccggtga cgccgaccgg tcctatacgg
     5581 ttcgaggcgt gtccctgtcc gcgtcggcgc gcgcgaagat cgaggcggcc ggcggcaaga
     5641 tcgaggggta agtgaccaca ccccgcgtcc ccaatctggc catcgacgac gagctgaagc
     5701 ggaagctcct cttcaccctc ggcatcctgg tgatctaccg gatcggcgcc cacatcgccg
     5761 cccccggggt gaacgtcacc gcactggccg atttcatccg gaactcggcc gccgccgggt
     5821 tcttcggact gtacgacgcc ctgggcggcg ggctctcccg cgccacggtg ttcgccctgg
     5881 gcatcatgcc ctacatctcg gcctcgatca tcttccagct ggcgggcggg atcgcgccgt
     5941 ccatcggcaa gatgcagaag gacgaggagg gcaagaagaa gatcacgcag tggacccggt
     6001 acctcaccgt ggccatcgcc ctctcccagg cctacacctt cgcgctcttc accgaatcca
     6061 tccccggtgc ggtgcccgag ccgggcttcg cctcccggct catcatggtg gtgaccctca
     6121 ccgccggcgc gatcttcgtg atgtggctcg gcgagcagat caccgagcgc ggcatcggca
     6181 acgggatgag cctgctcatc accttctcga tcctcgagcg gctctggccg ggcgcgctgc
     6241 agctcctcca gttcgtccag accggtgtgg tcagcgcgat cggcgcggtg gccttcctcg
     6301 ccattctcgt actgatcatc gcggcggtgg tggcgatgac gatcgcggcc cgccggatcc
     6361 ccatccagat cccccgcaag gtcatgggcc gggggcggat ccgggaaggg cagaagacct
     6421 tcatcccgat ccggctgatc accgccggcg tgatgccgat catcttcgcc cagaccatca
     6481 tcatcgtccc cggcaccctg gcgagcttca cccagaatgc cgtgctgcag gacctcgccg
     6541 gattcttcaa cccgggcgat tggccctaca acctcacctt cgcggcgatg atcctggtgt
     6601 tcagctactt ctacacctcg atcatcttca attccgtcga cctggcggag aacctgaaga
     6661 agcagggagg gttcatcccc ggcgtgaagc ccggcgccag caccgccgac tacatcgacg
     6721 gtgtgctcgg ccggatcacg ctgccgggcg gtctcttcct ggcgaccatc gccatcctgc
     6781 cgatcctggt gtcccagtgg ttcaacatcc ccacgtccgg cttcggcggc acgtccgtgc
     6841 tgatcgtggt cggcgtgctg ctggacacga tcgcccaggt ggagcagcac cgcacgctgc
     6901 ggaagtacga cgggttcatg aagacgggcc gggtgaagtt ccggggcagg cagcagcggt
     6961 acatgtagag gacggcgtga aaagggaaag gtgaaaggtg aaaaggtggg gtcgccctcg
     7021 cctttttcac ttttcacctt ttacgcttca cgcttctcga ggacaggagc tcatggatat
     7081 tcttctgctg ggcccgcccg gcgccggcaa gggcacccag ggcgcgattc tggggcgggc
     7141 gatgggcctc ccgaagttcg ccaccggcga cctcctgcgg gacgcggtca agcgcggcac
     7201 cccgctgggc caacaggcga aggcggtgat ggaggcgggc cacctcgtgg gcgacgacat
     7261 catcctcggc gtggtgcgcg aagaggtcgg aaagcccgag gcggccaagg gtgtgatctt
     7321 cgacggcgtg gtgcgcacca ttccccaggc cgagggtctg gagcggatcc tggcggagaa
     7381 gaagcggaag atggacgcgg tgctgttctt cgacgtcacc gacgaggaga tcttggcccg
     7441 gctggagcgg cgccggacgg tggagggccg tgccgacgac gacccggtgg cggtggccac
     7501 ccggctccgg gcctaccggg agcagactgc cccggtgctc gagtggtacg agcgccgggg
     7561 aggggtcaag cggatccccg cagtggggac ggtggacgag atcgccgcga gggtgaggga
     7621 cgcactgggg agatgatcac gctcaagtcg gcgcgggaga tcgagatcat ggcgaaggcc
     7681 gggcggatcg tcgccggcac gctcgccctg atgcgggaga tcgtgcgccc cggcatgacg
     7741 accgaggatc tcgacgcggc cgcggaggcg tatattcgcg gccacgccgg cgccgtcccc
     7801 tccttcaagg gcctctacgg cttccccaag acgctctgca cctccatcga cgaggagatc
     7861 gtacacggca tcccctcgcc ccgcagggtc ctggcggagg ggagcatcgt gagcgtggac
     7921 gtcggggtgc agctcgaggg gctccacgcc gactcggcga ccaccatccc ggtcggggag
     7981 gtggcgcccg aggcggagcg gctgatggag gtgacgcggg agtcgctcac ggcggcgatc
     8041 ggtcaggcgc gcctgggtaa ccacgtggga gacatcggcc acgcggtcca gaaggtggcc
     8101 gagggggccg gcttcggggt ggtccgcgag ctcgtcggac acgggatcgg gacccgcttt
     8161 cacgaagaac cccaggtgcc gaactacggc tcgccgcggc gcggcccccg gctgctcgag
     8221 ggcatgacgc tggccatcga gcccatgatc accctcggga gccccgccac ccgcaccctg
     8281 aacgacaaat ggacggtcgt gaccgccgac ggcagccttt ccgcccattt cgagcacacg
     8341 gtcgccatca ccgccaacgg gccgcggatc ctcaccacgg cctgagccta cccggtcggc
     8401 tgccccagca ggtgcagggc cgctcgctcc gcctcttccg cttccgccag cttctgcggc
     8461 accgcgcgcg ccacgccggc gaactcggaa tccgccggct ccccctccag attggtcgcg
     8521 accgcgcggg ccgcactccg cgcgctcgcc acggcgagga acaccgccgt cgcggcgtcc
     8581 gcctgcgcgc tccggagtcc ccgctccacc atggcggcgc cgagcgccgc cagttcggcg
     8641 cagcccgcca gcacgtcgcg ctgaatctcg gccgcgtcct gcagggcggc gcgcttccgc
     8701 cgctcgcgga gctgccgctc cgagtcgctc gtcctcggga gcgcgagggc ctcccccagg
     8761 cgaagcagcg cctccgcgtc cgccgaggcc agcgtcagga gctcctggcg caacccctcc
     8821 gcccgcgcgc gcgccgcccg cgcctcctca tgcaccggcg cataggcctc ccgtgccgcc
     8881 gtcagccccg ccaccatctc caccaccgcc gccgccagca cccccgccgc ggcggcggcc
     8941 gacccgccgc cgggcgcgat cgtcggacgg gcgatgagtc tggcccagtc gttgagcgag
     9001 gcggtgcggg tgggcgaggt cgggtcgggc atcctgggct ccgtcagggt caccacaagg
     9061 tacggagggc actgagacaa gagtagtgga acgaggctca gcgtgtggaa gccagcgtgt
     9121 cgaggagcca ggcatggatc accggattcc ccgccacgag cccggtatgc tcgatcccga
     9181 cctcccgccc ggagagatcc gtcaccacac cccccgcctc ccggatcagg agaacgcccg
     9241 ccgcgatgtc ccaggccgag agatactgct cccagaatcc gtcgaaccgg cccgccgcga
     9301 cgtccacgag gtccagcgag gccgccccgg gccggcggat gcccgaggtg cgtccggcga
     9361 cgcgacggaa ctgctccagg tactccgaga tcctgctcgt gtccttgaag ggaaatccgg
     9421 tcccgatgag cgcgaaggcg gggtccgcga tggcggacac ggtcagccgc cgctcgccgt
     9481 gccaggcgcc gccgccgctc gaggcggtgt acgtctggcc cgtcggcacg ttcaccaccg
     9541 ccgcgacttc cagcgcgcca tccaccgcac cggccaccga taccgcatag ctcgggaaat
     9601 cgtgcaggaa gttggtggtg ccgtcgagcg gatccacgat ccagaccaga ccctcggtca
     9661 ccacctcggg ctgcagctcc tcgccgacga tccgactgcc gggctccgcg ctgagcagca
     9721 cctcgctcac cagccgctcc gccgtccggt ccacctcggt cacgaaatcg cggctcccct
     9781 tgagcgacca cccggccggg tccgccgggc gctccacccc cctgaggtag ctcgccgcgc
     9841 gctcggcggc ggtccgggcc agatgcagta agtctaagga ggacaccatc ttgctggccc
     9901 tgcgggaacc gggtaacttg ccgggcatgg cgcgcatatt ctcggggatt cagccttccg
     9961 gcgagctgca catcggcaac tggctggggg cggtgcagaa ctgggtgaac ctccagcact
    10021 cctacgactg catcttttgc gtcgtggatc tgcacgcgat caccggaaag tacgaccagg
    10081 gaagcctggc cgcgcggacc cgggagatgg cgatcggact gctcgcctgc ggcatcgatc
    10141 ctgcgcgcgc ggtcctgttc gtgcaatctc acgtgcccga gcacagcgaa ttgcagtggc
    10201 tgctgaacac cgtcacaccg atcggcgagc tcgagcggat gacgcagttc aaagataagt
    10261 cgcaacgatt cgaaagtgtc ccggcaggtc tgctgaatta cccgg
//
LOCUS       DASUYN010000216         2214 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_69202, whole genome shotgun sequence.
ACCESSION   DASUYN010000216 DASUYN010000000
VERSION     DASUYN010000216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2214)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2214)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2214
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69202"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..205)
                     /locus_tag="VF061_04355"
     CDS             complement(<1..205)
                     /locus_tag="VF061_04355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668763.1"
                     /translation="MNTYGAPNQPGIPPSKPSHGDGGQGGHRWMMIACCVPMLLVAVV
                     LVATGVAGAGALFAAIACTLMMIM"
     gene            complement(202..444)
                     /locus_tag="VF061_04360"
     CDS             complement(202..444)
                     /locus_tag="VF061_04360"
                     /inference="COORDINATES: protein motif:HMM:NF022577.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgaP-like transmembrane domain"
                     /protein_id="HEX6668764.1"
                     /translation="MTSRWSVNITPAERVARVLVGLVGAVGGVWLASGAPSTVVAVLE
                     VLLVVAGLDLVVTGALGHCPLYQKLGHVPRSLRRTA"
     gene            complement(592..1032)
                     /locus_tag="VF061_04365"
     CDS             complement(592..1032)
                     /locus_tag="VF061_04365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668765.1"
                     /translation="MHALTSRQRSVVLALAATLLLAGCASGARPETKPAGDSDAVRLP
                     PRTASAGPVEVQVTDGRIDDARASFAIELNNHTVDLTGDYARGSTLTVGNRAWGAPRW
                     TGDGPGSHHRAGTLTFPSAGQPSGVVVLRIAGLPAPAELRWAGR"
     gene            complement(1514..1753)
                     /locus_tag="VF061_04370"
     CDS             complement(1514..1753)
                     /locus_tag="VF061_04370"
                     /inference="COORDINATES: protein motif:HMM:NF023095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2933 domain-containing protein"
                     /protein_id="HEX6668766.1"
                     /translation="MSGNHLKHMAIGGGVVLATLLLVGVPAGTALTYALLLACPLMMV
                     AMMFMMSGHGGGDSRGPGAPAQTSGREPTQRDRSS"
     gene            complement(1771..1986)
                     /locus_tag="VF061_04375"
     CDS             complement(1771..1986)
                     /locus_tag="VF061_04375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668767.1"
                     /translation="MGAGGWLVMALFWGTFLALAVWAVTRLLAPTPGGAAVDGSQDVL
                     DRRLATGELDLDTYRRLRDELAVGSRR"
BASE COUNT          384 a          806 c          738 g          286 t
ORIGIN      
        1 tcatgatcat catcagcgtg catgcgatgg cggcgaaaag ggccccagcg ccggctacgc
       61 cggtggccac gaggacgacc gccaccaaca gcatggggac acagcaggcg atcatcatcc
      121 agcgatgccc gccctgacca ccatcgccgt gcgatggctt gcttggcggg atccccggct
      181 ggttgggggc tccgtaggtg ttcatgctgt cctcctcagc gaccgcggca cgtggccgag
      241 cttctggtac agcggacagt gaccgagcgc gccggtgacc acgaggtcga ggcccgccac
      301 gaccagcagc acctccaaca cggcaaccac cgtggacggc gcgccggacg ccagccacac
      361 gccgcccacg gcaccgacca ggcccaccag gacccgggcc acccgctcag ccggggtgat
      421 gttcacgctc cagcgactgg tcatcggctt ctcctcctcg accggtccgg gagggttccc
      481 gtcccgccga gcaccagagc tgcccagctc cgtctcggtg cttccaatgt cgctcgggcc
      541 actgaagatg ccgcgtggag accgacgaag attcgctgaa gcgttgacgg ttcagcggcc
      601 ggcccagcgc aactcggccg gcgcgggcag ccccgcgatg cgcagtacga ctacgccact
      661 gggctgcccc gcggacggga aggtcagtgt gccggcgcgg tggtggctgc ccggaccgtc
      721 gcccgtccac cgcggcgcgc cccacgcccg gttccccacg gtcagcgtcg aacccctggc
      781 gtagtccccg gtcaggtcga ccgtgtggtt gttcagctcg atggcgaaac tggccctcgc
      841 gtcgtcgatg cggccgtccg taacctgcac ctccaccgga ccggccgacg ccgtacgcgg
      901 cggcaagcgc acggcgtccg aatcacctgc gggcttggtc tcgggccgtg cgccgctggc
      961 gcaaccggcg aggagaagtg tcgcggcgag cgccaggacg accgagcgct gtcggctcgt
     1021 caacgcgtgc atgtagcacc ctcggaaaga tgaactgacc ggacggcgtc cgtggcctcg
     1081 aggcccggcg cagaccccag ccgctggagg cgtcccacgg cgagcgaaac cccgatcacg
     1141 ttgattgcta gtccggccac catcaacggc cgctgtacgt cgatgaggaa ggtagcgatc
     1201 ccggcagcgc cggcgagggg cgccaagtcg gccacgtggt gagcgcagca cgccagcatc
     1261 cccaggcccg acgtaccagc ccctgcgctg accgagacag tcgccgcacg ggcggcccgg
     1321 tgtcgccgtc gcagctcgac catgagcgcg acctgggccg agaagcccac caccaagggc
     1381 gcaaggagcc accagtccgc ccggacttgc tggagcaggt gagcgatgcc agcggtccca
     1441 gcgaccacgc tcacgaagac accagccagc agaaggccag ctagccctcc gagggcggcg
     1501 ctccgtcggt ggatcacgac gatcggtccc gctgagttgg ctcccgcccg ctcgtctggg
     1561 cgggcgcgcc tggcccccgg gagtcgccac cgccgtgccc ggacatcatg aacatcatcg
     1621 cgaccatcat cagcgggcag gccagcagca gtgcgtaggt aagtgccgtg ccagccggca
     1681 cgccgacaag cagcagggtg gccagaacga cgccgccgcc gatggccatg tgcttcaagt
     1741 ggttgccgct catgccagtc gcctccctgt tcaccgacgg cttccgacgg cgagctcatc
     1801 gcgcaggcgc cggtaggtgt cgaggtctag ctccccggtc gcaagtcggc ggtcaagcac
     1861 atcctgggag ccgtcgacgg ccgcgccacc tggcgtcggg gcgagcaggc gggtcaccgc
     1921 ccagaccgcc agcgccagga aggtgcccca gaacagcgcc atcaccagcc accccccggc
     1981 ccccatgcca ccgcaccatg tgcctgcgaa catcagcctc acctcacggt cccgttccca
     2041 caggcacaac gatcgccagc atggatggcg gttgtcgggc gagaacggtg aaggatcgct
     2101 gaagtccgaa gtgaccgccc cggggtggat ggaggctctc aacccgccga agggtgggag
     2161 tcccggaagc accgaggaag tacccggacg aggtgcggga cgttgcgatc aaaa
//
LOCUS       DASUYN010000217         2564 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_70189, whole genome shotgun sequence.
ACCESSION   DASUYN010000217 DASUYN010000000
VERSION     DASUYN010000217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2564
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70189"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..301)
                     /locus_tag="VF061_04380"
     CDS             complement(<1..301)
                     /locus_tag="VF061_04380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMP synthase (glutamine-hydrolyzing)"
                     /protein_id="HEX6668768.1"
                     /translation="MPQHHDGILIIDFGSQYTQLIARRVREAHVYCEIHPPSRSVQWI
                     REWKPKGIILSGGPNSVYDENVPTADPELLRLDTPVLGLCYGMQLMAHLAGGNVTR"
     gene            complement(338..1642)
                     /gene="lysA"
                     /locus_tag="VF061_04385"
     CDS             complement(338..1642)
                     /gene="lysA"
                     /locus_tag="VF061_04385"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: protein motif:HMM:TIGR01048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008836 - diaminopimelate decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HEX6668769.1"
                     /translation="MGESVLSPAAPTESPLYADAGLERRGGPLFLGGAALTAIADSVG
                     TPAYLYNAGVIRRQFRALDQALAAVPHRVAYAVKANANLAVLRILRDLGAGADIVSGG
                     ELARALAAGFEPERIVFSGVGKTDAELTAAVEAGIGHVHLESTAELAALGRIVERLRR
                     PMKVGIRVNPDVTADTHPYIATGQGGIKFGVPVDQVVPLALGIRQHPLLTLDTIAMHI
                     GSQLLDAGPYAEGVRRLLELVAQLRQSGVETLTTLDVGGGLGIRYRDERPLSPAALAS
                     AIVPPVRESGLSLVLEPGRYLVGSAGVLLTTVLSRKHSGGKDLVIVDAGMNDLVRPSH
                     YMAYHEMAEIEPRGRPEAEVDVVGPVCETGDFLARDRALPGLERGERLAVLGAGAYGF
                     VMASNYNTRPRPAEVIVDEGRWWVSRPRERVDELYRTERVLP"
     gene            complement(1624..>2564)
                     /locus_tag="VF061_04390"
     CDS             complement(1624..>2564)
                     /locus_tag="VF061_04390"
                     /inference="COORDINATES: protein motif:HMM:NF015113.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="His/Gly/Thr/Pro-type tRNA ligase C-terminal
                     domain-containing protein"
                     /protein_id="HEX6668770.1"
                     /translation="AEEETLMILGLYRTFMEQWMGMPVLTGRKTDSERFAGALRTYSC
                     EAMMQDNKALQAGTSHNLGQNFSRAFEVTFQTASGDVDHVWNTSWGVSTRLVGALIMT
                     HGDDAGLVCPPRLAQYQVVIVPIYRSEEERTAVLETAERVRKELAAAGVRTHLDARDG
                     MKPGAKYYEWEGRGVPLRLEIGPRDVAAGTAILARRTGGKKESLPLAGLATALTSAME
                     AMQRELLETARARREANSIRGATREQFLARLEAGGGFIYSGFCGRGECEMEIKEQTKA
                     TVRVLPDEEFRSPEVPATCMWCGKPSVTEALWARAY"
BASE COUNT          355 a          925 c          896 g          388 t
ORIGIN      
        1 cgcgggtgac gttcccgccg gcgaggtggg ccatgagctg catgccgtag cagagcccga
       61 ggaccggcgt gtccagccgg agcagctcgg ggtcggccgt cggcacgttc tcgtcgtaca
      121 ccgaattggg accacccgag agaatgatgc ccttcggctt ccattcccgg atccactgca
      181 ccgagcgcga cggcggatgg atctcgcaat agacgtgcgc ctcgcgcacc cggcgcgcga
      241 tgagctgggt gtactgcgag ccgaaatcga tgatgaggat gccgtcgtgg tgctggggca
      301 ctcggggagg tctccttgaa gttgggggag ccgtcgttca gggcaacacc cgctcggttc
      361 ggtacagctc gtcgacccgc tcccgcgggc gggacaccca ccagcgcccc tcgtccacga
      421 tcacctcggc gggccggggc cgggtgttgt agttcgacgc catcacgaat ccgtacgcgc
      481 cggcgccgag cacggcgagg cgctctcccc gctccagacc gggcagcgcc cggtcgcgtg
      541 cgaggaagtc gccggtctcg cagacggggc ccaccacatc cacctccgct tcggggcggc
      601 cgcggggctc gatttccgcc atctcgtggt aggccatgta gtggctgggc cgcacgaggt
      661 cgttcatccc cgcgtccacg atgacgaggt ccttgccacc ggaatgcttc cgcgacagca
      721 ccgtggtgag cagcacgccg gcgcttccca cgagataccg acccggctcg aggaccaggg
      781 acaggccgct ctcccgcacc ggaggcacga tcgccgaggc cagcgcggcg gggctgagtg
      841 gacgctcgtc gcgataccgg atcccgagtc cgccgccgac gtcgagcgtc gtgagcgtct
      901 cgacgccgga ctgccggagc tgcgcgacca gctccagcag ccggcgcacg ccctcggcgt
      961 agggaccggc atcgagcagc tggctgccga tgtgcatcgc gatggtgtcg agcgtgagga
     1021 gcgggtgctg ccggatgccc agggcgagcg gcacgacctg gtccaccggc acgccgaact
     1081 tgatgccgcc ctgtcccgtc gcgatgtagg gatgagtgtc ggcggtgacg tcggggttca
     1141 cccggatccc gaccttcatc ggccggcgga gtcgctcgac gatgcggccc agcgccgcga
     1201 gctcggccgt ggattccagg tgcacgtggc cgatccccgc ctccacggcg gcggtcagct
     1261 ccgcgtcggt cttcccgaca ccgctgaaaa cgatgcgctc cggctcgaat ccggcggcca
     1321 gggcgcgagc cagctcgccg ccggagacga tgtccgcgcc ggcacccagg tcccgcagga
     1381 tccggagcac ggcgagattg gcgttcgcct tgaccgcgta ggcgacgcgg tggggcaccg
     1441 cggccagcgc ctggtccagg gcgcggaact gccgccggat gacgccggcg ttgtagaggt
     1501 aggccggcgt ccccaccgag tcggcgatcg ccgtgagggc ggcgccgccc aggaacagcg
     1561 gtccaccgcg ccgctccagg ccggcgtcgg cgtacagcgg cgactccgtc ggcgccgcgg
     1621 ggctcagtac gctctcgccc acagagcctc ggtcacgctg ggcttcccgc accacatgca
     1681 ggtggccggc acctccgggg accggaattc ctcgtcgggg agcacccgga cggtggcctt
     1741 ggtctgctcc ttgatctcca tctcgcattc cccccggccg cagaagccgg agtagatgaa
     1801 gcccccgccc gcctccaacc gagccaggaa ctgttccctg gtggcgcccc ggatgctgtt
     1861 ggcctcgcgg cgggcccgcg ccgtctccag cagctctcgc tgcatggcct ccatggcgct
     1921 ggtgagggcg gtggccaggc ccgcgagcgg caggctctcc ttcttcccgc cggtccgccg
     1981 ggccaggatg gccgtgccgg ccgcgacgtc gcggggaccg atctcgagcc ggagggggac
     2041 ccccctgccc tcccactcgt agtacttggc gcccggcttc atgccgtcgc gcgcgtcgag
     2101 atgggtgcga acgccggccg cggcgagctc cttgcggacc cgttccgccg tctcgagaac
     2161 ggcggtccgc tcctcctcgc tccggtagat cgggacgatc accacctggt actgggccag
     2221 gcgcggcggg cagaccaggc cggcgtcgtc gccatgggtc atgatcaggg ctcccaccag
     2281 ccgggtggac accccccagg acgtgttcca cacgtggtcg acgtcgcccg aggcggtctg
     2341 gaaggtgacc tcgaacgcgc gggagaagtt ctggcccagg ttgtgactgg ttcccgcctg
     2401 cagcgccttg ttgtcctgca tcatcgcctc gcagctgtag gtgcgcagcg cgccggcgaa
     2461 gcgctcgctg tcggtctttc gcccggtcag caccggcatc cccatccact gctccatgaa
     2521 ggtgcggtag agcccgagga tcatcagcgt ctcctcctcc gcct
//
LOCUS       DASUYN010000218         2201 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_70923, whole genome shotgun sequence.
ACCESSION   DASUYN010000218 DASUYN010000000
VERSION     DASUYN010000218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2201)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2201)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2201
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70923"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            525..>2201
                     /locus_tag="VF061_04395"
     CDS             525..>2201
                     /locus_tag="VF061_04395"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEX6668771.1"
                     /translation="MPAIAVPAFAPPFDPTAADPATALNLLLFAVPAALAVVLGLALL
                     YYRRRALKFTQDRTQLEERLRTEAAARQRAEQAQRRTEERYRTPADQVKDYAIYIMDD
                     QGRHRSWNEGVQRLLGYDKAEFLAASSADLFAPEDRAAGLPEQELAEAIAHGHSAGDQ
                     QLVRKDGSRFWASVSTTSVHSRQGELLGFAKRLRDLSEMRRVEEELRRNQEALELAHE
                     AAGLGTWEHDLVRGELRWDARARALFGLPADEDRPGARWADVIHPEDVGPTQELQERA
                     LAERKPFSAEYRVLWRDGTTHWVAAVGRGVMDLTTGRPLWMRGILLDITERKQTEERL
                     QEVLRLEAIGRLAGGIAHDLNNMLTAIVGFSELVGQGLGPLDARRADVDQIIRAADRA
                     AGLTRQLLAFARREIIQPRRLDLNAVVRGAEGILRPVLGENIELALQLAPAGGVIYAD
                     PARVEQIVMNLVLNARDAMPQGGRVTVNTAVVSLEAAAAGRRTGTETPPPGRYVMLSV
                     SDTGHGMDAATLQRMWEPFFTTKAVGHGTGLGLSMVYGSVKQSGGFVWADS"
BASE COUNT          353 a          759 c          775 g          314 t
ORIGIN      
        1 caagagctgc tgtggaggtt ttggacgcct cggcgccgcc aggtgaatcc caggccaagg
       61 ttggctaacg cgccgaagcc ggactccagg aagccgcggt gcttgatccc cgcagtgaag
      121 cccggaggcc ggcagcgaag gtgagccccg acggatcccc ctcctctctg ctgaaagtgt
      181 ataccagccc gagaaaggcc gagagccgac ccagcgcgaa ctaccgctcg ccttgcaggc
      241 cgaaccagcg catcgagttg ccaatgccgc ccgtgcccgt ggcgttccga accggaggtg
      301 gcgccgaatc gggctcctgg gtcggccccg gctgacggag gttccccagg cattggcggg
      361 cctcgccgag ggacgagttt gtccgcggcg ggctggcctc ttagtttgga ccacacccca
      421 acacatcgct cgatttgacc ggctccgccc agcaccctgg ccggccagga ggctgagtga
      481 cagggagccg gtcaataaaa cccacttccc gcgccgtggc cataatgccc gcgatcgctg
      541 ttccggcctt cgccccgcct ttcgacccca ccgcggccga tccggccaca gcgctgaacc
      601 tcctcctgtt cgctgtgccc gccgccctgg ccgtggtgct cgggctggcg cttctctact
      661 accgtcggcg agccctgaag ttcacccagg accgtaccca gctcgaagag cggcttcgga
      721 ccgaggccgc cgcgcggcag cgggccgagc aggcccagcg gcggaccgag gagcgctacc
      781 ggacgccggc ggaccaggtc aaggactacg cgatctacat catggacgac caggggcggc
      841 accgaagctg gaacgagggt gtccagcgac tcctgggcta cgacaaggcg gagtttctgg
      901 ccgcctcctc cgccgacctg ttcgctccgg aggaccgggc cgcaggcctg ccggagcagg
      961 aactcgccga ggccatcgcc cacggccact ccgcgggcga ccagcagctg gtgcggaagg
     1021 acgggtcgcg gttctgggcc tccgtttcca cgaccagcgt gcacagccgc cagggagagc
     1081 tgctcgggtt cgccaagcga ctccgggacc tcagtgagat gcggcgggtc gaggaggagc
     1141 tcaggcgcaa ccaagaggcg ctggagctgg cgcacgaggc ggccggcctc ggcacctggg
     1201 agcacgatct cgtgcgcggt gagctgcgat gggacgcgcg cgcgcgggcg ctgttcggtc
     1261 tcccggcgga cgaggaccgg cctggagccc gctgggccga tgtcatccac cccgaggatg
     1321 tgggaccgac ccaggagctg caggaacgag cgctggccga gcggaagccg ttctccgccg
     1381 agtaccgggt gctctggcgc gacggcacga cccactgggt cgccgccgtc ggacgagggg
     1441 tcatggacct caccactggc cgacccctct ggatgagagg catcctgctc gacatcactg
     1501 agcgtaagca gaccgaagag cgtctgcagg aggtgctgcg cctggaggcg atcggccggc
     1561 ttgcgggcgg catcgcccac gacctcaaca acatgctcac ggccatcgtg ggattcagtg
     1621 aactggtggg gcagggtctc ggaccgttgg acgcgcgccg cgcggacgtg gaccagatca
     1681 tccgggcggc cgaccgggct gccggactga cgcggcagct cctggccttc gctcgccgcg
     1741 agatcatcca gccgcggcgg ctcgacctga atgccgtcgt tcgcggcgcc gagggaatcc
     1801 tccgtccggt cctgggcgag aacatcgagc tggcgctcca gctcgccccc gcggggggag
     1861 tgatctacgc cgaccccgcc cgcgtggagc agattgtgat gaacctggtg ctgaatgccc
     1921 gggatgccat gccgcagggc ggcagggtca cggtgaatac ggcggtcgtc tcgttggagg
     1981 ccgcggccgc ggggcgacgg actggaaccg agactccccc gcccggccgc tacgtcatgc
     2041 tgtccgtgag cgacacgggg cacgggatgg atgccgccac gctgcagcgg atgtgggagc
     2101 cgttcttcac caccaaggcc gtcggccacg ggaccggcct cggcctctcc atggtgtacg
     2161 gctcggtcaa acagagtgga ggcttcgtct gggccgactc c
//
LOCUS       DASUYN010000219         2460 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1394533, whole genome shotgun sequence.
ACCESSION   DASUYN010000219 DASUYN010000000
VERSION     DASUYN010000219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2460)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2460)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2460
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1394533"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..918)
                     /locus_tag="VF061_04400"
     CDS             complement(<1..918)
                     /locus_tag="VF061_04400"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX6668772.1"
                     /translation="MSVRRSHLAFLAAAFLPLIGACGDDKRPVTTTIPGSSTPAVAAD
                     SGSPAGTVTETTAATVPVSYVDAEAAYTARKYGEAAELFGSYTRSNPENPWGHYMHGL
                     SAWKSGDSEQAMASFDEALRIDPQHRKSLLNSARVLLDTGRPREALERVERAMSLEPL
                     SAEGLRLLGRARYELKQIPEAIDAYQRAIALDERDVWALNNLGLIHIQQDRSEAALPI
                     LARAVELRTDSPVFQNNLGTALERTGHFAAAKRAYEAALAADSTYGKASASLARVTAL
                     AGSDTTTVDLSTFVAEFNAEVQRSRGAVDS"
     gene            complement(1132..>2460)
                     /locus_tag="VF061_04405"
     CDS             complement(1132..>2460)
                     /locus_tag="VF061_04405"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEX6668773.1"
                     /translation="TGGYEVLTAPTGEKALEILGSAPVDCVVLDLEMPGMDGFEVLRA
                     LERKGSQVPVIVYTGTGSYDRCVQAIRLGAYGFIDKAEPMERVVQEIESAMERSRLRS
                     ENFALRRQLGRETSLVGGSAAMAELRATIAKVAPVPTQVLITGESGSGKELVARDLHR
                     FGPHPAGPFVAINCAALPDSLVESELFGHERGAFTGAISTRKGAFEAAERGTLFLDEI
                     GELPLQAQAKLLRVLEERQVTRVGGTRPVKVEARIVAATNRDLEVAVREGRFREDLYF
                     RLAVHVVRVPPLRERLSDIPALADQFLTGICARFGIRRKKIAPDALDLLMAYEWRRNN
                     VRELRNVVERMIIAAESEIIAPEDVPLEIRSGGAPASLPLTGTQGFQALKAEAERRIV
                     VSALERHDWHVTRTAEALGLADHASLLKIMRRHGIRRAAGPRKAEADGGD"
BASE COUNT          348 a          873 c          850 g          389 t
ORIGIN      
        1 gctatcgacc gcgcccctcg agcgctgcac ctccgcgttg aactccgcca cgaacgtgct
       61 caggtccacg gtcgtcgtgt cactcccggc cagcgcggtg acgcgggcga ggctcgccga
      121 ggccttgccg taggtgctgt ccgcggcgag cgcggcctcg taggcccgct tggccgccgc
      181 gaagtggccg gtgcgctcca gggccgtgcc caggttgttc tggaacaccg gcgaatcggt
      241 ccggagctcc accgcccggg ccaggatcgg cagggccgcc tcgctccgat cctgctggat
      301 atggatgagg ccgaggttgt tcagggccca gacgtcgcgc tcgtccaggg cgatggcgcg
      361 ctggtacgcg tcgatggcct cggggatctg cttcagctcg taccgtgcgc ggcccaggag
      421 ccggagccct tcggccgaga ggggctcgag cgacatcgcc cgctcgaccc gctccagcgc
      481 ttcgcggggg cggccggtgt cgagcagaac ccgcgcggag ttgagcaggc tcttccggtg
      541 ctggggatcg atccggaggg cctcgtcgaa gctggccatc gcctgctccg agtcgcccga
      601 tttccaggcc gagaggccgt gcatgtagtg gccccacggg ttctccggat tggaccgggt
      661 gtaggagccg aacagctcgg ccgcctcccc gtacttccgg gcggtgtagg ccgcctcggc
      721 gtccacgtag gagaccggaa cggtcgcggc cgtagtctcg gtgacggtgc cggccggcga
      781 gccggagtcg gcagccacgg ccggggtgga gctgcccggg atggtggtgg tgaccgggcg
      841 cttatcgtcg ccgcaggccc cgatgagggg caggaaggcg gcggcaagga atgcgagatg
      901 ggagcgacgg accgacatgg gactacctcc tggctgggcg cccgcaggcg cgtagggtga
      961 tcggcgccat gcttaaggca agagggtggc cagaaggaca ctgctcggtg gctggtttct
     1021 aagtaactcc caattataca gttgacgtta agcacccagc cgtagtcaag cgggaatgtg
     1081 tccttcagga cacgcgaggc aaggtgccgc cgtgtcctat gggacacgct gtcaatcacc
     1141 cccgtccgct tcggccttgc ggggtccggc tgctctgcgg atgccgtgtc gccgcatgat
     1201 cttgagcagg ctcgcgtggt ccgccagccc gagggcctcg gcggtccggg tcacgtgcca
     1261 gtcgtgccgc tccagggcgg aaacgacgat ccgccgttct gcctccgcct tgagcgcctg
     1321 gaagccctgg gtccccgtga gcggcagact cgccggcgcg ccccccgacc ggatctccag
     1381 cgggacgtcc tccggcgcga tgatctcact ctccgccgca atgatcatcc gctccaccac
     1441 gttcctcagc tcgcgcacgt tgttccgccg ccactcgtag gccatgagca ggtcgagcgc
     1501 gtcgggcgcg atcttcttcc gccggatccc gaaccgggcg cagatcccgg tcaggaactg
     1561 gtcggccagg gccggaatgt ccgagagccg ttcccgaagc ggcggcaccc tcactacgtg
     1621 gacggcgagg cggaagtaga gatcctcccg gaaccgtccc tcccgcaccg cgacctccag
     1681 gtcgcggttc gtcgcggcca cgatacgcgc ctccaccttc accggcctgg tcccaccgac
     1741 gcgggtgacc tgccgctcct cgagaacgcg gagcagcttg gcctgcgcct ggagcgggag
     1801 ctcgccgatc tcgtccagga agagtgtgcc tcgctccgcg gcctcgaacg cgcccttccg
     1861 ggtgctgatc gctccggtga aggcccctcg ctcgtgcccg aagagctcgc tctccaccaa
     1921 gctgtcgggc agcgcggcgc agttgatggc gacgaacggc cccgccgggt ggggaccaaa
     1981 ccggtggaga tcgcgggcca ccagctcctt gccggacccg ctctcgcccg tgatcagcac
     2041 ctgggtcggc accggcgcca ccttggcgat cgtggcgcgc agctccgcca tggccgcgct
     2101 tccaccgacc agcgaggtct cgcggccgag ctgccggcgg agcgcgaagt tctccgaccg
     2161 caggcggctc cgctccatgg cgctttcgat ctcctgcacc acccgctcca tcggctccgc
     2221 cttgtcgatg aagccgtagg cgccgagccg gatggcctgg acgcagcgat cgtagctgcc
     2281 ggtgcccgtg tacacgatca cggggacctg ggaccccttc cgctccaggg cgcggagcac
     2341 ctcgaacccg tccatcccgg gcatctcgag gtcgagaacg acgcagtcca cgggcgcgga
     2401 gcccaggatc tccagcgcct tctctccggt cggcgcggtg agcacctcgt acccgccggt
//
LOCUS       DASUYN010000220         3920 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1394705, whole genome shotgun sequence.
ACCESSION   DASUYN010000220 DASUYN010000000
VERSION     DASUYN010000220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3920)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3920)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3920
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1394705"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            54..1736
                     /locus_tag="VF061_04410"
     CDS             54..1736
                     /locus_tag="VF061_04410"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HEX6668774.1"
                     /translation="MTAGPQSDLLPASQVAELINGLGKALRAFHMYLPNNPIYQRATD
                     NLRASFTPIWSVLDELVLSVVETDFVWEDQVVYHQLNKSESLAWGLFKDGMRSLTIKR
                     GAEQEELTRFLEMINRARYLPADAGDDLLTLLWEQEFQYIQYQFVEFFGEGGGTMPEQ
                     TGTYPTGGEDPAAQQRREQIAEEAPPRPKGVVDLEDFDSTLYFLDESEIHRVAREVED
                     EYRRDARTAALNILFDLFELEGDPGIRTEVLDIIDHLFPNLLNARDFRTAAAVLRESK
                     LLAARAKGLTAADRGRLDAFVAKLSQPAIAAQLLQSLDETPSLAADAEVAEVLRELRA
                     TALEPVLSAIPALTSPGLKAILEGVADRLASSHTDEVLRILRSPDSPALASVVTLCGR
                     LGLHQVVPGLAGTVAHPDPTVRLASVQALAQLGTPAALALVDKAIEDDDRGVRLAAVR
                     VAGARGYKGALKRVEAAVLGKKDMDLTEKMAFFEAYGAIAGAGALKALSGMLLPRGLL
                     KLKESSETRACAAIALGRIGTAEARELLTRVADDKDLVVRNAVSRALRGSAT"
     gene            1733..3184
                     /locus_tag="VF061_04415"
     CDS             1733..3184
                     /locus_tag="VF061_04415"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HEX6668775.1"
                     /translation="MTQPPDAGQRSAPEGQLRQGGRALLLAFYTALRSLKLYPVENAT
                     VQKALDDLHATAQALIAIESDLEVRLAGDFIFVNATRLRLELDNYASFSHILVMLRAF
                     EIGALRIHGSDRREWQILLSLLLSISEQRQPEERFEELAERLGAAGVTSLEVERATHH
                     EYGETEQERQAAKRVYSQGVAVTREVITSVRMGRATSVKRVKRAVQLIVDQVLNNETS
                     LMGLTTIRDYDEYTFAHSVNVCIFSVALGKKLGFSRLQLYDLGLTALLHDMGKARVPV
                     EILNKTTGLDEREWRVMQAHPWLGALTLFTLRSYDETPYRAILTAHEHHMKTDFTGYP
                     RTVRPRELGIFSRIVSVADGFDAATTRRSYQTVPIEPDQVLREMWQNPKRGYDQILVK
                     ALINLIGIYPVGTCVILDTFEVAIVAAPEPEGQQLNRPLVRIAVEADGGAVPPPGRLV
                     GLTERDEAGTYRRSIVKVTNPSRYGLTVGDYFV"
     gene            3177..>3920
                     /gene="trpA"
                     /locus_tag="VF061_04420"
     CDS             3177..>3920
                     /gene="trpA"
                     /locus_tag="VF061_04420"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: protein motif:HMM:NF012511.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HEX6668776.1"
                     /translation="MSDSILTRALADLRARGRPGLIPYLTAGYPDLRTSEEALHAADE
                     LADILEVGVPFSDPLADGPTIQRSTFRALEQGMTLAGTLELIRRCRLRRPVVVFSYLN
                     PVLRYGLDRFLADAEELGVAGLLLTDLPAGSDPRVERAVQTSALDLIRLIAPTTRPER
                     LHAAVAGAQGFVYLVARLGVTGASRALADDLSDSIQRVRLATPLPVAVGFGISSAEQA
                     AAVGRQADGVVVGSALVEVLGRDGVAGARR"
BASE COUNT          583 a         1395 c         1373 g          569 t
ORIGIN      
        1 ggccggggcg acaaggacgt ggcccacgtg gccgcgctgc tggggagcgt cgggtgacgg
       61 ccgggcccca gtcggatctc ctccccgcct cccaggtcgc ggagctgatc aacggcctgg
      121 gcaaggcgct ccgcgccttc cacatgtacc tccccaacaa tcccatctac cagcgcgcca
      181 cggacaatct ccgcgcgtcg ttcactccga tctggtccgt gctcgacgag ctggtgctca
      241 gcgtggtcga gaccgacttc gtgtgggagg accaggtcgt ctaccaccag ctcaacaaga
      301 gcgagagcct ggcgtggggg ctgttcaagg acgggatgcg ctcgctcacg atcaagcggg
      361 gcgcggagca ggaggagctg acccggttcc tggagatgat caaccgcgcg cgctacctcc
      421 cggccgacgc cggtgacgat ctgctcacgc tgctctggga gcaggagttc cagtacatcc
      481 agtaccagtt cgtggagttc ttcggcgagg gcggcggcac gatgccggag cagaccggca
      541 cctatcccac cggcggcgag gacccggcgg cccagcagcg gcgggagcaa atcgctgagg
      601 aagcgccgcc ccggcccaag ggcgtggtgg acctcgagga cttcgactcc acgctctact
      661 tcctcgacga gtcggagatc caccgggtcg cgcgcgaggt cgaggacgag taccgccgcg
      721 acgcccgcac ggcggcgctc aacatcctgt tcgacctctt cgagctggag ggcgacccgg
      781 gcatcaggac ggaggtgctc gacatcatcg accatctctt ccccaatctc ctcaacgccc
      841 gcgacttccg gaccgcggcg gcggtcctcc gggaaagcaa gctcctcgcg gcgcgggcga
      901 aggggctcac ggcggcggat cgcgggcggc tggatgcctt cgtcgccaag ctgagccagc
      961 cggcgatcgc ggcccagctg ctgcagtccc tggacgagac cccgtcactc gccgccgatg
     1021 cggaggtggc ggaggtcctg cgggagctgc gcgcgacggc gctggagccg gtgttgagcg
     1081 ccatcccggc gctgacgtcg cccgggctga aggcgatcct cgagggcgtg gccgaccggc
     1141 tggcctcgtc ccacaccgac gaggtgcttc gcatcctccg ctcccccgac tcacccgccc
     1201 tggcgtcggt cgtgacgctc tgcggccgtc tcgggctcca tcaggtggtg ccgggactgg
     1261 ccgggacggt cgcccatccc gatcccaccg tgcggctggc gtcggtgcag gcgctcgcgc
     1321 agctcggcac ccccgccgcg ctggcgctgg tggacaaggc gatcgaggac gacgatcgcg
     1381 gggtccggct cgcggccgtg cgggtcgccg gcgcgcgggg ctacaagggc gcgctcaagc
     1441 gggtggaggc ggcggtgctg ggcaagaagg acatggatct caccgagaag atggcgttct
     1501 tcgaggcgta cggggccatc gccggcgccg gcgcgttgaa ggccctgagc ggaatgctgc
     1561 tcccccgcgg gctgctcaag ctcaaggaat cgtccgagac ccgggcctgc gccgcgatcg
     1621 cgctgggccg gatcggcacc gcggaggccc gcgagctcct cacccgggtg gccgacgaca
     1681 aggatctggt ggtccgcaac gcggtgagcc gcgcgctccg ggggagcgcg acatgaccca
     1741 gccgcccgac gccggccagc gctccgcgcc cgaagggcag ctgcggcagg gtgggcgcgc
     1801 tctgctcctc gccttctata ccgcgctccg gagcctcaag ctctacccgg tcgagaacgc
     1861 caccgtccag aaggcgctgg acgacctcca cgcgaccgcc caggcgctca tcgccatcga
     1921 gagcgacctc gaggtccggc tggccggtga tttcatcttc gtcaacgcca cccggctccg
     1981 cctggagctc gacaactacg cctccttcag ccacatcctc gtgatgctcc gggcgttcga
     2041 gatcggcgcg ctccggatcc acggcagcga ccggcgcgag tggcagattc tgctcagcct
     2101 cctgttgagc atctcggagc agcggcagcc ggaggagcgc ttcgaggagc tggccgagcg
     2161 cctgggcgcg gctggggtga cctcgctgga ggtcgagcga gccacccacc acgaatacgg
     2221 tgagaccgag caggaacggc aggcggccaa gcgggtctac tcccagggag tggcggtcac
     2281 ccgggaggtg atcaccagcg tgcggatggg acgcgccacc agcgtcaagc gggtgaagcg
     2341 ggcggttcag ctcatcgtgg accaggtgtt gaacaacgag acctcgctga tggggctcac
     2401 caccatccgg gactacgacg agtacacctt cgcccactcg gtgaacgtct gcatcttctc
     2461 ggtcgcgctg gggaagaagc tgggcttctc gcgcctccag ctgtacgacc tggggctgac
     2521 cgcactgctc cacgacatgg gcaaggcccg ggtgccggtc gagatcctga acaagaccac
     2581 cgggctcgac gagcgggagt ggcgggtgat gcaggcgcac ccctggctcg gggccctgac
     2641 gctcttcacc ctgcgctcgt acgacgagac cccgtatcgg gccatcctga cggcgcacga
     2701 gcaccacatg aagaccgatt tcaccggcta tccgcgcacc gtcaggccgc gggagctggg
     2761 gatcttttcc cggatcgtgt cggtcgcgga cgggttcgac gccgcgacga cgcggcgcag
     2821 ctatcagacg gtgccgatcg agccggacca ggtgctgcgc gagatgtggc agaaccccaa
     2881 gcggggctac gaccagatcc tggtgaaggc gctcatcaat ctcatcggca tctatccggt
     2941 ggggacctgc gtgatcctcg acaccttcga ggtggcgatc gtcgccgctc ccgagccgga
     3001 gggacaacag ctcaaccgcc ccctggtgcg catcgccgtg gaggccgatg gcggcgccgt
     3061 gccgccgccg ggccgactgg tcggcctcac cgagcgcgac gaggccggca cctaccggcg
     3121 ctccatcgtg aaggtcacca acccctcgcg ctacggcctc accgtcggcg actactttgt
     3181 ctgattccat cctcacccgg gctctcgccg atctccgggc gcgcggccgc ccggggctca
     3241 tcccctatct caccgccggc tatcccgacc tccgcaccag cgaggaggcg ctccacgccg
     3301 ccgacgagct cgccgacatc ctggaggtcg gggtgccgtt cagcgatccg ctcgccgacg
     3361 ggcccacgat ccagcgctcg accttccggg ccctggagca agggatgacg ctggcgggca
     3421 cgctcgagct catccggcgc tgccggctgc gccgcccggt cgtggtcttc agctacctga
     3481 acccggtcct ccgctacggg ctggaccgtt tcctcgccga tgcggaggag ctgggcgtgg
     3541 ccgggctcct gctgaccgac ctgcccgcgg gaagcgaccc ccgggtggaa cgcgccgtgc
     3601 agacgagcgc gctcgacctg atccggctca tcgcgccgac gacgcgtccc gagcggctcc
     3661 atgccgccgt ggccggggcc caggggttcg tctatctcgt cgcccggctc ggggtcaccg
     3721 gggccagtcg ggccctcgcg gacgatctgt cggactcgat ccagcgcgtc cgtctggcca
     3781 cgccgctccc cgtggccgtg ggcttcggca tctccagcgc agagcaggcg gccgccgtgg
     3841 gccggcaggc ggacggcgtg gtcgtcggga gtgccctggt ggaagtgctc ggccgcgacg
     3901 gggtcgcggg ggcgaggcgc
//
LOCUS       DASUYN010000221         2899 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_72743, whole genome shotgun sequence.
ACCESSION   DASUYN010000221 DASUYN010000000
VERSION     DASUYN010000221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2899)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2899)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2899
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_72743"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(244..393)
                     /locus_tag="VF061_04425"
     CDS             complement(244..393)
                     /locus_tag="VF061_04425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668777.1"
                     /translation="MTRIKLVYWSLVSVLGALTFFLVAAGARMLRGRLDMGDAEGGSG
                     KGLRS"
     gene            491..576
                     /locus_tag="VF061_04430"
     tRNA            491..576
                     /locus_tag="VF061_04430"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:524..526,aa:Leu,seq:caa)
     gene            complement(727..945)
                     /locus_tag="VF061_04435"
     CDS             complement(727..945)
                     /locus_tag="VF061_04435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668778.1"
                     /translation="MSRMDPGRAAAEGREAVRLGRPVSDLPHNLDETEGRAWRAGWLL
                     GHEEAQAWRAEWEAGVLPYGRGAPRTAA"
     gene            complement(942..1163)
                     /locus_tag="VF061_04440"
     CDS             complement(942..1163)
                     /locus_tag="VF061_04440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668779.1"
                     /translation="MAELSREQVCTAIRLRLNVGALPKLEGDVFRVYDRVCQRRERLE
                     DVVTVFPGMTMEAVQAAWDTLRVWAEEDL"
     gene            complement(1450..1767)
                     /locus_tag="VF061_04445"
     CDS             complement(1450..1767)
                     /locus_tag="VF061_04445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668780.1"
                     /translation="MLCFLTARRLKPGSYDRFRQAWEPGEWPAGFLRAYHVRNSQDED
                     QVVSFGLFEGTMEDYRALRADQAASQVEDKRQREMAEVVDSVLLDGVFEVIEEVVPPH
                     RRG"
     gene            2091..2252
                     /locus_tag="VF061_04450"
     CDS             2091..2252
                     /locus_tag="VF061_04450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668781.1"
                     /translation="MSTTTTWTDPLDYVRRRRWTRIEGPAAATMSVSDAQALLAYSPF
                     LRREDLHLI"
     gene            2590..2733
                     /locus_tag="VF061_04455"
     tRNA            2590..2733
                     /locus_tag="VF061_04455"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2681..2683,aa:Leu,seq:caa)
BASE COUNT          414 a         1090 c          950 g          445 t
ORIGIN      
        1 cgagtcgctc acccgccgtg cgcctccgcg tgcctcgctc gccgcccgct cgacgggcgg
       61 cggcgtcagg aacttcctca cgagccagcc ggcgttctcc ggaaattccg tcaccgcgat
      121 cttcgcgtgg tgaaccaacc accggccggg gtggtcgttg ctcatcgggg tccgtccttg
      181 gtgatggggt gtgggctaac cctacacctg ggtgcccgca tcaaacgcgg tcatgatttc
      241 ctctcaggat ctgagaccct tgcccgagcc gccctcggca tcgcccatgt ccagccgccc
      301 gcgcagcatg cgcgcgccgg cggcgacgag gaagaaggtc agcgccccga ggaccgagac
      361 cagcgaccag tagacgagct tgatgcgggt cacgaccctt cagctacccg gcccgcggcg
      421 cggcaaaccg gtccccgggg caatcctgag ggcactgatc gccgggaccg cggctacact
      481 cggcccgccg ggggacgtgg cggaacggca gacgcggcgg tctcaaacac cgctgaggga
      541 cagcccctcg tgtgggttcg actcccaccg tccccatgcg gtgcccgctt ggtcagggca
      601 atctcggccg gtaggcagaa cgcggcttct ccgctcaaga ccgctcaaga ccgcccgttt
      661 tcgtgtacga ctggcccaca actggccccc acgtgccgcg ccggctccgg cgctcgattc
      721 cgtccctcag gctgccgtgc gcggagcgcc ccggccgtag ggcaagaccc cggcctccca
      781 ctcagcgcgc caggcctggg cctcctcgtg gccgagtagc cagcccgccc gccaggctcg
      841 cccctcggtc tcgtcgaggt tgtggggcag gtccgagacc gggcggccga ggcgcaccgc
      901 ctcgcggcct tcggctgccg ctcggcccgg atccatgcgg ctcacagatc ctcctccgcc
      961 cagacgcgga gcgtgtccca ggccgcttgg accgcctcca tcgtcatccc cgggaagacc
     1021 gtgaccacgt cctcaagccg ctcccgccgc tgacagacgc ggtcgtacac gcggaagacg
     1081 tcgccctcca gcttggggag cgcgcccaca ttcagccgga gcctgatcgc tgtgcagacc
     1141 tgctcgcggc tgagctcggc catcgaacgg ggcttccttc gtcctggggg ccaggagcct
     1201 accgaccccg gtccgctcgc cctgagccgg tctcggtgcg gcacagtgcc cgggatggcg
     1261 ccggtcacgc cagcgaagta agtttccagg agatgggcgg cccggccatc gcgtccgccc
     1321 attcggagag gttgcgagcg gcgtcggtcc atggcggtgt cggcgccgct tcgccaggag
     1381 acacgccagg gcgggcgcct ggtagacgtc ctccatcagc cggcgccccg gcgcttggcg
     1441 tcatcccggt cagccgcggc ggtgaggcgg gaccacctcc tcgatcacct cgaagacgcc
     1501 gtcgagcagg accgagtcca ccacctcggc catctcccgc tggcgcttgt cctccacctg
     1561 gctggccgcc tggtccgccc gcagggctcg gtagtcctcc atcgtgccct cgaagagccc
     1621 gaaggagacg acctggtctt cgtcctggga gttgcgcacg tggtaggcgc gcaggaagcc
     1681 cgccggccac tcaccgggct cccaggcctg gcggaagcgg tcgtagctcc ccggctttag
     1741 ccggcgagcg gtgaggaagc agagcatgga gcctccttcg gttagcgctg gataggccga
     1801 ccctatgtgg atacgccata acgggggagc gcgcccatct agcggccccc cctttcgacc
     1861 ttccggacgg gggcccccgg tttttctcac acggagttgc gaggcagttg cccgcgagcc
     1921 ctccacctat gaaccccccg cccccacgta cgccgttcta ggtaccgacg gtagggcgca
     1981 tgttggcctc gaattgcccc gcgggtaacc gaggctttgc cgcggcgtgg gagcgtcgcc
     2041 gcgcaccggg ttcccatcgg cgacggctac acccgaggga gggttacgat atgtccacca
     2101 ccacgacctg gacagacccg ctcgactacg ttcgcaggcg tcgttggacg cgcatcgagg
     2161 ggccggcggc ggccaccatg tcggtgtcgg acgcccaggc gctcctggcc tacagcccat
     2221 tcctccgccg cgaggaccta cacctgatct gagccccgcg tccggcttgc ggcggctcct
     2281 gcggggcggg cccggcctgt ggcggcgcgc gacgcgcgac aaggtcgacg cccggcggca
     2341 gccggaggtc attcacctcg cgccgttttc ttggaggcac agctacggca caaccgctgg
     2401 aggttcgacc tcttccacat cgcgccccca tccgccacgc gcacgatgtg atcgaccacc
     2461 gcgggcagcg acgtgtcgcc gcactctcgg cagcacgggt cctcggccag cacggcccgc
     2521 cgccacttct gccagcgccc cgtcgtcagg cggcccccgc agaggtccca tcccgccatc
     2581 tagggagctg gggcgtggcg catctactgg cgcatcgcat ccgggcgagt gccgagagtc
     2641 cagtttctat gcggggtgtc gcaaattccg gtcgcggtct caaacaccgc tgagggacag
     2701 ccctcgtgtg gggttcgact cccaccgtcc ccaagcgttc ccggcgaaca ggcgtgtcgt
     2761 acgcgccacc agctcccccg ggcgtccggg cgcgcgcctc gtcggtgcct ccaccgagtt
     2821 ccagcatgac gaacccgggc gggatccctt caggaccgct tcggagtgaa gaagaagcgc
     2881 agcctccggg tttcccctg
//
LOCUS       DASUYN010000222         6728 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1616784, whole genome shotgun sequence.
ACCESSION   DASUYN010000222 DASUYN010000000
VERSION     DASUYN010000222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6728)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6728)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6728
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1616784"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..983)
                     /locus_tag="VF061_04460"
     CDS             complement(<1..983)
                     /locus_tag="VF061_04460"
                     /EC_number="1.2.7.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR03121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formylmethanofuran dehydrogenase subunit A"
                     /protein_id="HEX6668782.1"
                     /translation="MRDICIEGGRIVPEVPLGTPTLNARGTVVMPGGVDIHSHVASSA
                     CNHARRLQPEEHTAEPVPAPELLDGEAPARSGTGGTLPSTFTTGYRYAGLGYTTVFDA
                     AVAPIMARHSHEEFDDTPIVDGGFFVLLGNDEYLLRQVETRNRDRARDYAAWMLGATG
                     GYAIKIVNPGGIQAWKSGQRNLTQIDQPLGSSRVTPRAILETLTDAANSLRLPHPVHI
                     HCNNLGMPGNAHTTLQSMEALAGRRAHFTHLQFHCYGSGAGDGWSSAAQRIIEYLNAN
                     PQLSADVGQVMFGPATTISADAPIEYLLHANSGRKWTNIDVELETGCGIVP"
     gene            complement(1052..2320)
                     /locus_tag="VF061_04465"
     CDS             complement(1052..2320)
                     /locus_tag="VF061_04465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668783.1"
                     /translation="MSSSFPHVTCLGCGCACDDIVVTVEDERIVRTEHACALGMGWFG
                     DGRVPGEIRVDGHPSSLDLALDAAADILNAARGRLLVFFGEDLTCSAQRAAVGIADRL
                     RAVTESVVSENAAAGILAAQRRGRAGCTLGEIRNRADLVLFWGTDPEKQYPRFRSRFT
                     PLSGLHLRRGHAGRSIVSVAIGPDTGPPEADLYLTLPLQDEVAALAELRTRLLGRSLG
                     DPAPWSPELAALADRLIRAKYVALIHDGEHSDQQRSPERIEALIALAQALNGPTRAAL
                     SSLRGGGNRSGAEAVLTWQTGFPFAVDFSRGAPRYQPDRRAADRLDTGALAAGLVVGA
                     PRSVPETLQRGLARIPTVVVGPRASEAPFAARVLIDTGVAGIHESGVGYRMDDVPLPL
                     QEILPGPRSATETLVQLARRLAPARTGVRS"
     gene            complement(2395..3225)
                     /locus_tag="VF061_04470"
     CDS             complement(2395..3225)
                     /locus_tag="VF061_04470"
                     /EC_number="1.2.7.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR03122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018493 - formylmethanofuran dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0015948 - methanogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formylmethanofuran dehydrogenase subunit C"
                     /protein_id="HEX6668784.1"
                     /translation="MSLDLTLHTAPAVPLEADILTPGRLAGLSALETAKLTVVHGNQS
                     AELGEFFRVSGALDGEIHLTGDLARVKLIGAGMSEGRIVVHGSAGMHLGAGMSGGEIL
                     VEGDAGDWVGPEMTDGRIVVRGNAGHMVGAAYRGSRVGLQGGEIVIFGNAGNEVGSGM
                     RRGLIAIGGDSGDFTGVNLLAGTIVVLGRLGWRTGAGMRRGTIVSMHGAELLPTFSFA
                     CTYRPIFLRLYLPYLKRLGLPVNDAQARGSYQRWCGDAIELNRGEILLLETGDAGAAN
                     "
     gene            complement(3222..4130)
                     /gene="fhcD"
                     /locus_tag="VF061_04475"
     CDS             complement(3222..4130)
                     /gene="fhcD"
                     /locus_tag="VF061_04475"
                     /EC_number="2.3.1.101"
                     /inference="COORDINATES: protein motif:HMM:NF002554.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formylmethanofuran--tetrahydromethanopterin
                     N-formyltransferase"
                     /protein_id="HEX6668785.1"
                     /translation="MQLNGTAIVDTFAEAFAMWGARVVITAETTEWARAAAQSMTGFA
                     TSIIGCKCEAGIEAELPPAETPDGRPGIGVLLFSTSAEGVGKRLVERVGQCVMTCPTT
                     ACYNGLEAAAETVVVGGQLRYFGDKHQISKLLAGRRLWRVPVMDGEFLVDERFGIQPA
                     VGGGNILILGRDQAATLRAAEAAVAAMRGAPGAILPFPGGVVRSGSKPKSRYSFLFAS
                     TNDAYCPTLRPLAPATELPEGIGAVLEIVIDGLDLPAVEEAMRRGIHAAAAAGAVQIS
                     AGNYGGGLGQYQIALRPLAEPVGAGL"
     gene            complement(4142..5818)
                     /locus_tag="VF061_04480"
     CDS             complement(4142..5818)
                     /locus_tag="VF061_04480"
                     /EC_number="1.2.7.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR03121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formylmethanofuran dehydrogenase subunit A"
                     /protein_id="HEX6668786.1"
                     /translation="MSSPLRIVNGRIYDPANGMDGVVRDLCLENGKVVDEVPPDARRI
                     DAQGMVVMPGGVDIHCHIAGPKVNLARKVQPEDHRQDVHLRTRLTRSGTGGTVPSTFT
                     TGYRYAALGYTAAMEAAVTPLGARHTLEELHDTPVIDKGFFVLVGNNVLLYRLLQEGR
                     REEFRHALAWWLSTTKAYAPKLVNPGADELWKGERNANITSLDQKIGPFDLTPRGVIA
                     AFIETANDLGLPHPVHIHCNNLGHTGNYETTLETMRIAEGRRAHITHIQFHSYGSVAG
                     KSGDNPTSQAQVIGDFVNSHPNISADVGAVMFGPSTSMTADAPLAYMLRHFGGGKWVN
                     ADTENESGCGIVPFTYQSRVYTNALQWAIGLELFLLSEDPWRMVFSTDHPNGGSFMSY
                     PRLIRLLMDAEYRKAEMAKVNQQALEHSGLRDCQSREYSLYEIAIITRAGPARLLGLT
                     QKGHLGVGADADVTIYDEDPDKEKMFATPRYVIKDGELVIEDHEFRADHYGRLFHVAP
                     DYDSGIEKVIQPFFEDYYTIQFGNYPVADRYAHAHQTIPTAPQAAAAAHP"
     gene            complement(5845..>6728)
                     /locus_tag="VF061_04485"
     CDS             complement(5845..>6728)
                     /locus_tag="VF061_04485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="formylmethanofuran dehydrogenase subunit B"
                     /protein_id="HEX6668787.1"
                     /translation="AHPRLFTRYAVTPKGMYVPNGKKDRTVVLVDVRRTLSTPVADIF
                     VQVKPRSDFEVLWALRALVKGRKVDPSVEERTGVSLAVLEDLVARMKSCNFGALLFGM
                     GLTMNRGRHFNSGALLALATDLNEFTHWVAKPVRGHGNVTGADNVVSWQTGFPFGVNF
                     ARGYPRFNPGEFTTVDVLARGDADAALIIASDPASNFPKAAIEHLKRIPVITLDPKLT
                     HTSQLARVAFTTATYGINVAGTVYRMDDVPITLRPAFESPYPSDEQILTAIRERVREL
                     LGGNRLPAGTPLAAATS"
BASE COUNT         1050 a         2268 c         2315 g         1095 t
ORIGIN      
        1 taggggacga tcccgcaccc ggtctccagc tcgacatcga tgttggtcca cttgcgcccg
       61 ctgttggcat gcagcaggta ctcgatcgga gcatcggcgc tgatggtcgt ggccgggccg
      121 aacatgacct ggcccacgtc ggcgctcagc tgcggattgg cattcaggta ctcgatgatc
      181 cgctgggcgg cggagctcca gccatctccg gcaccgctcc cgtagcagtg gaactgcagg
      241 tgggtgaaat gggctcgccg gccggcgagc gcctccatgc tttgcagcgt ggtgtgggcg
      301 tttccgggca tgcccagatt gttgcagtgg atgtgcacgg ggtggggcag ccggaggctg
      361 ttcgccgcgt cggtcagggt ttccagaatc gcccggggcg tcacccggct ggaccccaga
      421 ggctggtcga tctgcgtcag gttgcgctgg ccggacttcc aagcctggat gccgcccggg
      481 ttcacgatct tgatggcgta tccgccggtg gcccccagca tccaggcggc gtagtcgcgg
      541 gcccggtccc ggttgcgcgt ctcgacctgc cgcagcaggt attcgtcgtt cccgagaaga
      601 acgaagaagc ccccgtcaac gatcggggta tcgtcgaatt cttcgtgact gtgccgtgcc
      661 atgatcggcg cgaccgccgc gtcgaatacg gtcgtgtagc cgaggccggc atagcggtag
      721 ccggtcgtga aggtgctggg cagcgtgccg ccggtcccgg agcgggccgg agcctcccca
      781 tccagcagct ccggagccgg caccggttcg gccgtgtgct cttccggctg gagccggcgg
      841 gcatgattgc aggcggagct ggccacgtgc gaatggatgt ccacaccgcc gggcatcacg
      901 accgtgcccc tagcgttaag ggttggggtg ccgagcggca cctcggggac gatacggccg
      961 ccctcgatgc agatgtcccg cacctctccc tggatcccat tcatcggatc gtaaatcgag
     1021 gcacccacga tccgccgccg atcgggcgaa ctcatgaccg caccccggtt cgggccggcg
     1081 cgaggcggcg agcgagctga accagcgtct cggtggcgga tcgcggcccg ggaaggatct
     1141 cctgcagcgg gagcggcacg tcatccatgc ggtatcccac gcccgactcg tgaatgccgg
     1201 cgacaccggt gtcgatgagc actcgggccg cgaagggagc ctcgctcgcc cggggaccga
     1261 cgaccaccgt cgggatccgg gcgagtcccc tctggagggt ctcgggaacg ctcctcggag
     1321 cgcccacgac gagcccggcc gcgagcgcgc cggtgtcgag ccggtccgcc gctcggcgat
     1381 caggttgata ccgaggggca ccgcgcgaga aatcgacggc gaaagggaat ccggtctgcc
     1441 aggtcagcac cgcctccgcg ccgctgcggt tgcctccacc gcgcaggctg ctcagcgccg
     1501 cgcgcgtggg accgttgagt gcctgcgcca gtgcgatcag cgcctcgatc cgctcgggtg
     1561 agcgctgctg gtctgagtgc tcgccgtcgt ggatcagggc aacgtacttc gcccggatca
     1621 gccggtcggc cagtgcagcc agctcgggcg accacggggc cggatcaccc aggctgcggc
     1681 ccaggagccg ggtccggagc tcggccagtg cagcgacctc gtcctgcaag gggagcgtca
     1741 ggtacagatc cgcctcgggg ggccccgtgt ccgggccgat ggccaccgag acgatgctgc
     1801 ggcccgcgtg tccccggcgg aggtgaaggc cgctcagcgg agtgaaccgg gagcggaagc
     1861 gcgggtactg cttctccgga tcggttcccc agaagagcac caggtccgcc cggttccgga
     1921 tctcgcccag ggtgcagccc gcccggcccc gtcgctgagc cgcgagaatg cccgctgcgg
     1981 cattctccga gaccacactc tcggtcacgg cgcggagccg atcggcgatt ccgacggctg
     2041 cccgctgcgc cgagcaggtg agatcttccc cgaagaagac gagcagccgg ccacgggcgg
     2101 cgttgagaat gtcggcggca gcatcgagcg ctaggtcgag gctcgatggg tgcccgtcca
     2161 ctcgaatctc ccccggcacg cgcccatcgc cgaaccagcc catgcccagg gcgcacgcgt
     2221 gttcggtgcg gacgatacgc tcgtcctcga ccgtgaccac gatgtcgtca caggcacagc
     2281 cgcacccgag gcaggtgacg tgcgggaacg acgagctcat ggctggcagg aggactcgca
     2341 cagcgcccgg cgaaagatgc tcatgcctga ggtggagaag ggttcgctgg cggctcagtt
     2401 ggccgcgcca gcgtccccgg tctcgagaag gaggatttcg ccgcggttca actctatggc
     2461 gtcgccacac cagcgctgat aggagccccg cgcctgggcg tcattcaccg gaagaccgag
     2521 ccgtttcagg tagggaagat acaggcgaag gaagatgggc cggtaggtac aggcgaagct
     2581 gaacgtcggg agcagctcag ccccgtgcat ggacacgatc gtgccgcgcc gcatgcccgc
     2641 cccggtccgc cagccgagcc gcccaagcac cacgatcgtt ccggccagaa ggttcacgcc
     2701 ggtgaagtcc ccgctgtcac ccccgatcgc gatcagaccg cggcgcatcc cgctcccgac
     2761 ctcgttgccc gcgttgccga agatcacgat ctccccgccc tgcaggccca cccggctgcc
     2821 gcggtaggcg gccccgacca tgtgcccggc gttcccgcgc accacgatgc ggccgtcggt
     2881 catctcgggt ccgacccagt cgccggcgtc accctcgact aggatctcgc cgccgctcat
     2941 cccggcgccc agatgcatgc ccgccgaccc gtgcaccacg atgcggccct cgctcatccc
     3001 cgcaccgatc agcttcaccc tggcgagatc gccggtgagg tggatctctc catcgagggc
     3061 cccggagacc cggaagaact cgcctagttc ggccgactga tttccgtgga ccacggtgag
     3121 ctttgcggtt tcgagcgcgg acagaccggc gagtcggccc ggggtgagga tatccgcctc
     3181 gagtgggacc gcgggagcgg tgtgcagcgt caggtcgaga ctcatagccc agccccgacc
     3241 ggctccgcca gtggccgcag agcgatctgg tactgcccga gtccgccgcc gtagttgccg
     3301 gccgagatct gcaccgcccc ggccgcggcg gcggcatgga tgccgcggcg catggcctct
     3361 tcgaccgcgg ggaggtcgag gccgtcgatc acgatttcca gcacggcgcc gatcccttcg
     3421 ggaagctcgg tcgcgggggc cagcgggcgc agggtgggac agtacgcgtc gttggtggag
     3481 gcgaagagga aggaataccg gctcttgggc ttactaccgc tgcggaccac gcccccggga
     3541 aacggcagga tcgcgccagg ggcaccgcgc atcgcggcga ccgccgcctc ggccgctctg
     3601 agggtggccg cctggtcccg gccgaggatc aggatattgc cgccccccac ggcgggctgg
     3661 atgccgaacc gttcatccac cagaaactcg ccgtccatca ctggcacccg ccacagccgg
     3721 cgcccggcca gcagcttgga gatctggtgc ttgtccccga aataccggag ctgaccaccc
     3781 accacgaccg tctcggcggc cgcctcgaga ccgttgtagc acgccgtggt ggggcaggtc
     3841 atgacgcact gtcctacccg ttcgaccagc cgcttaccca cgccttcggc actggtggag
     3901 aagagcaaca cgccgatgcc ggggcggcca tcgggcgtct cggccggagg cagctccgcc
     3961 tcgatccctg cctcgcactt gcagccgatg atcgatgttg cgaagccggt catcgactgg
     4021 gcggcggctc gggcccactc cgtggtctcg gccgtaatca cgacccgcgc cccccacatc
     4081 gcgaaggcct ccgcgaaagt gtcgacgatc gccgtgccgt tgagctgcat gcgatggctg
     4141 cctatgggtg agcggcggcc gcggcctggg gcgcggttgg aatggtctgg tgcgcgtggg
     4201 cgtaccggtc cgccaccgga taattgccga actggatggt gtaatagtcc tcgaagaacg
     4261 gctgaatcac cttctcgatc ccggagtcat aatccggcgc cacgtggaac aggcgcccgt
     4321 agtgatcggc gcggaactcg tggtcctcga tcaccagctc gccgtccttg atgacgtagc
     4381 ggggcgtggc gaacatcttc tccttgtccg gatcctcgtc gtagatggtg acgtccgcat
     4441 ccgcgcccac ccccagatgt cccttctggg tcagcccgag gaggcgggcc gggccggcgc
     4501 gggtgatgat cgcgatctcg tagagcgagt attcgcgtga ctgacagtcc cgcagtccgc
     4561 tgtgctcgag ggcctgctgg ttgaccttgg ccatctccgc cttgcgatac tcggcatcca
     4621 tcagaagacg gatgagccgc ggatagctca tgaacgatcc accgttggga tggtcggtgg
     4681 aaaagaccat ccgccaggga tcttcggaga gcaagaacag ctcgaggccg atcgcccact
     4741 gcaacgcgtt ggtgtagacc cggctctggt aggtgaacgg gacgatgccg caaccactct
     4801 cattctcggt gtcggcattg acccatttgc ccccgccgaa atggcggagc atgtaggcca
     4861 ggggggcgtc cgccgtcatg ctggtggagg gcccgaacat cacggccccg acatccgcgc
     4921 tgatgttggg atggctgttg acgaagtcgc cgatcacctg agcctgcgag gtcggattgt
     4981 cgccgctctt gccggcgacc gagccgtagc tgtggaactg gatgtgggtg atgtgggccc
     5041 gccgcccctc ggcgatccgc atggtctcga gcgtcgtctc gtaattgccg gtgtgcccca
     5101 ggttgttgca gtggatgtgc accgggtgtg gcaggccgag gtcgttggcg gtctcgatga
     5161 aggcggcgat cacgccgcgg ggcgtgagat cgaagggacc gatcttctga tccagggacg
     5221 tgatgttggc gttgcgctcc cccttccata gctcgtccgc gccgggattg accagcttcg
     5281 gcgcatacgc cttggtcgtg ctcagccacc aggcgagcgc gtgccggaat tcctcgcgcc
     5341 gcccctcctg gagcaaccga tagagcagca cattgttgcc caccaggacg aagaagccct
     5401 tgtcgatgac gggggtatcg tgcagctctt ccagtgtgtg gcgggcgccg agcggggtca
     5461 cggccgcttc catcgccgcc gtgtaaccga gagcggcgta gcggtaaccg gtagtgaagg
     5521 tggagggcac cgtccccccg gtgccggagc gggtcagccg ggtacgcagg tgcacgtcct
     5581 gccggtggtc ctccggctga actttccgtg cgaggttgac cttgggtccc gcgatgtggc
     5641 agtgaatgtc gacgccgccg ggcatcacca ccatgccctg cgcgtcgatc ctcctggcgt
     5701 ccggagggac ttcgtccacg accttcccgt tctcgaggca caggtcgcgg accaccccat
     5761 ccatgccgtt ggcgggatcg tagatcctgc cgttgacgat ccgcagcggt gagctcaacg
     5821 cggcgctcct ctcggtaccc ggacctagga ggtggcggcg gcgagcggcg tcccggcggg
     5881 aaggcggttg ccacccagga gctcccggac ccgctcgcga atcgccgtca atatctgttc
     5941 gtcgctgggg tacggcgact cgaaggcggg ccgcagcgtg atgggcacgt cgtccatgcg
     6001 gtacaccgtg ccggccacgt tgatgccgta ggtcgccgtg gtgaacgcga cccgcgccag
     6061 ctggctcgta tgggtgagct tgggatccag cgtgatcacc gggatccgct tcagatgctc
     6121 gatggccgcc ttggggaagt tcgacgccgg gtcgctggcg atgatcagcg ccgcatcggc
     6181 gtccccgcgc gcgagcacgt cgaccgtcgt gaactcgcct ggattgaagc gggggtagcc
     6241 gcgcgcgaaa ttcacgccga aggggaagcc ggtctgccac gagaccacgt tgtcggcgcc
     6301 ggttacgttg ccatggcctc gaaccggctt cgccacccag tgggtgaact cgttgaggtc
     6361 ggtcgccagc gccagcaggg ccccggagtt gaagtgccgc ccgcggttca tcgtcaggcc
     6421 catgccgaac agcaacgccc cgaagttgca gctcttcatc cgcgcgacca ggtcctccag
     6481 gaccgcgagg gagacgccgg tgcgctcctc gacggacggg tcgaccttcc ggcccttgac
     6541 cagggcccgc aacgcccaga ggacctcgaa gtcgctgcgc ggcttcacct gaacgaagat
     6601 gtcggccacc ggcgtgctga gggtccgccg cacgtccacc agcacgacgg tgcggtcctt
     6661 cttgccgttg gggacataca tccccttggg cgtcacggca tagcgggtga agagccgcgg
     6721 atgggcct
//
LOCUS       DASUYN010000223         3048 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1395677, whole genome shotgun sequence.
ACCESSION   DASUYN010000223 DASUYN010000000
VERSION     DASUYN010000223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3048)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3048)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3048
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1395677"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            102..1133
                     /locus_tag="VF061_04490"
     CDS             102..1133
                     /locus_tag="VF061_04490"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX6668788.1"
                     /translation="MSRLGVLAAGAFAGWVGMRLLRGGERYSFAGKTVLVTGGSRGLG
                     LALARRLAAEGARVAICGRDPEALERARSELEAVGTEGLALPVDVSDRDAVAALVGRV
                     TERFGPIDMLVNNAGVITVGPEETMTLADYEEAMAVNFWGTVYPTLAVLPSMRERGSG
                     RIVNITSIGGRLGVPHLLPYSASKFAALGFTQGLRAEARRRGVLVTAVVPGLMRTGSP
                     RNATFRGRHRAEYAWFSIADSLPGLTIGAEEAARRVLDGARRGDAEVRFPMVTRLAVV
                     AGAVAPNLTASVMSLAGRMLPGAPAEPRGRRPGRESRSAASPSWLTRLGDDAARRYNQ
                     IAPSEGASA"
     gene            1171..1911
                     /locus_tag="VF061_04495"
     CDS             1171..1911
                     /locus_tag="VF061_04495"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEX6668789.1"
                     /translation="MTNDRIGETRQWDNLRRPGESSGVDINVGRRERVMSMVAAAGLA
                     AYGLRRRRGRALVLPIAGALLGRAVSGRCAVNQMLGRNTALDDEPSSPVTSVRRGEGV
                     RVDERIVIARPRSEVYGFWRNLENLPRFMDHLESVSVVDEERSHWVARGPAGTRVEWD
                     AVVHNEIPNELIAWRSLKGSEVDNAGSVHFSPTENGDTEVRVVLRYDPPAGRLGAAVA
                     RLFGEDPSLQVAEDLRRLKQVVEAGEPG"
     gene            1908..2804
                     /locus_tag="VF061_04500"
     CDS             1908..2804
                     /locus_tag="VF061_04500"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX6668790.1"
                     /translation="MTWDCIIVGGGPAGLSAALMLGRCRRRVLLCDAGEQRNLRSHGL
                     HGYLTRDGTAPDEFLRLGRRELGRYGTVECRELTIVDAVREDGGFHLRAADGSRLRSR
                     KLLLATGVVDELPALDGLDPLYGTSVHHCPYCDAWEWRDHPLAAYGEGEPACGLALSL
                     TFWSRDVLLCTGGAEVPSETAARLQAAGVQVREEPVARLEGRNGKLERIVFAAGEPAA
                     RSALFVLPGQRQRSPLAERLGCRFTEKGAVHTGTCEVTNVPGLFVAGDASKDAQFVVV
                     AAAEGTEAAMAIHKALMKEDLP"
     gene            complement(2816..>3048)
                     /locus_tag="VF061_04505"
     CDS             complement(2816..>3048)
                     /locus_tag="VF061_04505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668791.1"
                     /translation="RRAAVQIYGRKAAKGDSPRVRTEGYLELLARLEAVPEGEVIVHG
                     LAFSDAVYLVFTDPARAECLGVLRKRRLARGT"
BASE COUNT          419 a         1007 c         1196 g          426 t
ORIGIN      
        1 tgaacgaaga cctgggccgg ctgaaggcgc tgctcgaggg cgccaacagg agtgagacac
       61 atgggcgaga atctgagccg tagcgccgcg gcggcgaggt cgtgagccgg ctcggggtgc
      121 tcgctgccgg cgcgttcgcc ggatgggtcg gcatgcgcct gctccggggc ggcgagcggt
      181 actccttcgc cggcaagacg gtgctggtca ccggcggctc ccgcggactg ggactcgccc
      241 tcgcgcgacg cctcgcggcc gagggggccc gggtagccat ctgcggtcgc gaccctgagg
      301 cgctcgagcg ggcccgctcg gagctggagg cggtggggac ggaagggctc gccctcccgg
      361 tcgacgtctc ggaccgcgat gccgtcgccg cgctggtggg tcgagtgacg gaacggttcg
      421 ggcccatcga catgctggtg aacaacgccg gggtcatcac ggtcggaccc gaggagacga
      481 tgacgctggc ggactacgaa gaggccatgg ccgtcaactt ctggggcacg gtctacccga
      541 cgctcgccgt tctcccgtcg atgcgcgagc gggggagcgg gaggatcgtg aacatcacgt
      601 cgatcggggg gagacttggc gttccccatc tgcttccgta cagcgccagc aagttcgccg
      661 cattgggatt cacccagggg ctgcgcgccg aggcgcggcg ccgcggcgtg ctcgtcacgg
      721 cggtggtccc cggactgatg cgcaccggca gcccgcgcaa cgcgaccttc cgcggccggc
      781 accgcgccga gtacgcctgg ttcagcatcg ccgactcgct ccccggtctc acgatcggcg
      841 cggaggaggc ggcgcggcgg gtcctggacg gtgcccgacg gggtgatgcc gaggtgcgat
      901 tcccgatggt cacccggctc gcggtggtcg cgggggccgt cgctcccaac ctcacggcct
      961 cggtcatgag cctcgccggg cggatgctcc cgggcgctcc agcggagccc cgcggtcgtc
     1021 ggcccgggcg ggagagccgg tccgcggcct ccccctcctg gctcacccgc ctgggagacg
     1081 atgcggcccg acgctacaac cagatcgccc cctcggaggg tgcgagcgca tgagcccgcg
     1141 gggcgggcag agaggaacgg tggaatggcc gtgacgaacg acaggattgg ggagacgcgg
     1201 cagtgggaca atctgcggcg ccccggggag tcgagcgggg tcgacatcaa cgtgggccgg
     1261 agggaacgcg tgatgtccat ggtggcggcg gccggactgg cggcctacgg gcttcggcgt
     1321 cgccgtgggc gggcgctggt gctgccgatc gcgggggcgc tcctggggcg cgcggtgagc
     1381 ggtcgttgcg cggtcaacca gatgctgggc cggaataccg ccctcgacga cgagccctcc
     1441 agtccggtca ccagcgtgcg ccggggggaa ggggtgcggg tggacgagcg catcgtcatc
     1501 gctcgtccgc gcagcgaggt gtacgggttc tggcgtaacc tggagaatct cccgcgcttc
     1561 atggatcacc tggagtcggt cagtgtggtg gacgaggagc ggtcccactg ggtggccagg
     1621 ggcccggcgg gtacgcgggt ggagtgggac gcggtggtcc acaacgagat tcccaatgag
     1681 ctgatcgcct ggcgctcgct gaagggctcc gaggtggaca acgccggctc ggtccacttc
     1741 tcacccaccg agaacggcga caccgaggtt cgggtggtgc tgcgctacga tccgccggcg
     1801 ggacggttgg gtgccgcggt ggcgcggctg ttcggggagg acccgtccct ccaggtcgcc
     1861 gaggacctgc ggcggctgaa gcaggtcgtg gaggccggcg agcccgggtg acctgggatt
     1921 gcatcatcgt gggcggcggc cccgccgggc tgagcgcggc gctcatgctc ggccggtgcc
     1981 gccgccgcgt gctgctgtgc gacgccggcg agcagcggaa cctccgctcc cacggtctcc
     2041 acggctatct cacccgggac gggactgctc cggacgagtt ccttcgtctg ggtcgccggg
     2101 agctgggccg ctacgggacg gtcgagtgcc gcgagctgac gatcgtggac gcggtacggg
     2161 aggacggcgg cttccacctg cgcgccgcgg acggcagccg cctccggagc cgcaagctgc
     2221 tcctcgccac cggcgtggtg gacgagcttc ccgcgctgga cgggctcgat ccgctgtacg
     2281 gcaccagcgt gcaccactgc ccctactgcg acgcgtggga atggcgcgac catccgctcg
     2341 ccgcgtacgg cgagggggag ccggcgtgcg ggctcgcgct gagcctcacc ttctggtcgc
     2401 gggacgtgct gctgtgcacc ggcggtgcgg aggtaccctc tgagacggcc gcccggctgc
     2461 aggcagcggg ggtgcaggtg cgagaggagc cggtggcgcg tctggagggc aggaacggaa
     2521 agctggagcg catcgtgttc gccgccggcg agcccgcggc ccgcagcgcg ctcttcgtcc
     2581 ttcccggcca gcggcagcgc agcccgctgg ccgagcggct gggctgccgc ttcaccgaga
     2641 agggagccgt gcacacgggg acctgcgagg tgacgaacgt gccgggactc ttcgtcgcgg
     2701 gagacgcgtc gaaggatgcg cagttcgtgg tggtggccgc ggcggagggc accgaggcgg
     2761 ccatggcgat ccacaaggcg ctgatgaagg aggacctgcc ctaggctccc cgggctcaag
     2821 tcccccgtgc caggcggcgc ttgcgaagca ctcccagaca ttcggctcgg gcgggatcgg
     2881 tgaagacgag gtagaccgca tcactgaagg ccaggccgtg cacgatgact tccccctcgg
     2941 ggacggcctc gagccgggcc aggagctcga gatacccctc ggtgcgcacg cgcggggaat
     3001 cgcccttggc agccttccga ccataaatct gcacggcggc ccgccggg
//
LOCUS       DASUYN010000224         2738 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1616867, whole genome shotgun sequence.
ACCESSION   DASUYN010000224 DASUYN010000000
VERSION     DASUYN010000224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2738)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2738)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2738
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1616867"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2738)
                     /locus_tag="VF061_04510"
     CDS             complement(<1..>2738)
                     /locus_tag="VF061_04510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668792.1"
                     /translation="ADLRLRGELLGGSVRGEGWARPFDSVPSYSLAGGALGLEGTEAV
                     ASTLAGEDGEPQLDLRFSLRGNGVVPREADLRGEIRLAAVKRGGERVPLGDAGIRLVA
                     GRLELRPELLVAGGTIGGIATARLGDTVTYQVRRGTIDRVDLGRLMGDTVVAPLSGRF
                     RLSGRGTSPEEAAVTATFELDEVRYAARRVEEVVARARVDGGRAVLDLRGTLQGGRLA
                     VEASARPFDSVTTFQVRRAALDSVDLGTLLGRPDLAGPVTLAGSGGGTWSETERAVQG
                     TLTLAPSRLGHVEVTDGTAGAELRGERLTWNAALRSSGGALSLAGEGRPLAEVPSYTV
                     RQGRADSLDLGVLLGNDSLSTALSAKFAGSLTGTVLDSLLARLDLELLPSRVNDAELG
                     PGRLTLGLDRGALKGDVRLDGGDAALTAALTGNVGTHQSRVRAGGDLRVERLARWTGD
                     TAADGRLEGRFGLDLVADSSGLATVGGQVTALGGVGGVRLQQLHVAFSPAPGAVEVDT
                     LVIRSNAMVLDGAGRIALRTGATRDTFRVSGRTGDLTPLMRLAGADSVVVDSTLLDLT
                     VTGPPERRRIEGQADAFRLLYGGTLAERITARGGATMDSTGMSAVDGRVRVLGAAAGK
                     LTARTVELTGRSDSVVSLQGTIEVSDDISLGLGLQGSTSGDTTVAQLQRLDLNEGGRR
                     WRLTRPAGIALRPDAVEVDGFALAAGDRGISLDGIFTRRDSSDLTMRINGLELDALAE
                     ARLAPLAGRLDGTLHLSGPAEAPSVEGRMALAVRQPDGDDVGRIESELAWTRTGLRVD
                     ANASHREGGRLTVAGTLPWRLTLVPEDTAARVGFAREPADTMLLAVRADSFDLAFFEP
                     FLPQETATALTGGLAVDAQIAGTPDQPRATGTVDLRDLGLELPTLGVTYQEGRLVG"
BASE COUNT          367 a         1052 c          971 g          348 t
ORIGIN      
        1 ggcccacgag tcggccctcc tggtaggtga cccccagcgt gggcagctcg aggccgaggt
       61 cacgcaggtc cacggtcccg gtcgcgcggg gctggtcggg cgtgccggcg atctgcgcgt
      121 ccacggcgag cccgccggtg agagcggtgg cagtctcttg gggcaggaac ggctcgaaga
      181 aggccaggtc gaagctgtcc gcgcgcacgg cgagcagcat ggtgtcggcc ggctcccgcg
      241 cgaagcccac cctcgcggcc gtgtcctcgg gaacgagcgt gagccgccac gggagcgtgc
      301 cggccacggt gagccggccg ccctcgcgat gactggcgtt ggcgtccacc ctgaggccgg
      361 tccgggtcca ggccagctcc gactcgatcc ggcccacgtc atcaccgtcg ggctggcgca
      421 cggcgagcgc catccgtccc tcgaccgacg gcgcctcggc gggccccgag aggtgcagcg
      481 tgccgtcgag gcgtccggcc agtggagcca gcctcgcctc ggccaacgcg tccagctcca
      541 ggccgttgat gcgcatggtc aggtcgctgg agtcgcggcg ggtgaagatg ccgtcgaggg
      601 aaatgccgcg atcacccgcg gcgagggcga agccgtccac ctcgacggca tccggccgga
      661 gcgcgatgcc ggcggggcgc gtcaacctcc atcgacggcc gccctcgttc agatcgagac
      721 gctggagctg ggcgacggtg gtgtcaccgc tcgtgctccc ttgcaggccg agcccgaggc
      781 tgatgtcgtc gctcacttcg atggtgccct ggagcgacac gaccgagtcg gagcgcccgg
      841 tcagctccac cgtccgcgcg gtgagcttgc cggcggcagc accgaggacg cgcacccgac
      901 cgtccaccgc gctcatcccg gtgctgtcca tcgtggcgcc gccccgggcg gtgatccgct
      961 cggcgagcgt tcccccgtac agcagacgga aggcgtcggc ctgcccctcg atccgccggc
     1021 gctcgggcgg accggtgacg gtgagatcca gcagggtgga gtccaccacc accgagtcgg
     1081 cgccggcaag ccgcatgagg ggggtgagat cgccggtgcg gcccgagacg cggaaggtgt
     1141 cccgcgtggc gccggtgcga agcgcgatcc ggccggcccc gtcgagcacc atcgcgttgg
     1201 accggatcac cagggtgtcc acctcgaccg cgccgggagc ggggctgaac gccacgtgga
     1261 gctgctggag ccgaacgcca ccgacgccgc cgagcgcggt gacctggccc cccacggtgg
     1321 cgaggccgct gctgtcggcg acgaggtcga gcccgaagcg tccctccagc cggccgtccg
     1381 cggcggtgtc gccggtccag cgcgccagtc gctcgacccg caggtcgccc ccagcgcgca
     1441 ctcgcgactg gtgggtgccg acattgccgg tgagcgccgc ggtcagtgcg gcgtcgcccc
     1501 cgtccagtcg gacatctccc ttcaacgccc cgcggtcgag gcccagtgtc agccgacccg
     1561 gccccagctc cgcgtcgttg acgcgggagg gcaacagctc cagatccagc cgcgcaagca
     1621 ggctgtcgag caccgtgccg gtcagggatc ccgcgaactt ggcgctgagc gccgtgctga
     1681 ggctgtcgtt accgagcagc acgcccaggt cgagcgagtc cgcccggccc tgtcgcaccg
     1741 tgtaggaagg gacctccgca agggggcgac cttcgcccgc gagggagagt gcgccgccac
     1801 tgctccggag cgccgcgttc caggtgagcc gctcgcccct cagctcggcg cccgccgttc
     1861 catcggtcac ctcgacgtgc cccagccgcg atggtgccag ggtgagagtg ccttgcaccg
     1921 ccctctccgt ctcactccat gtcccgcctc ccgagcccgc cagcgtcacg gggccggcca
     1981 ggtccggccg gcccaggagg gtgccgagat ccacgctgtc cagcgcggcg cggcggacct
     2041 gaaaggtggt caccgagtcg aaggggcggg cgctcgcctc caccgcgagc cgcccaccct
     2101 ggagtgttcc acggaggtcg aggaccgccc gcccgccatc gactcgcgcc cgggcgacca
     2161 cttcctccac cctgcgggcg gcgtagcgca cctcgtccag ctcgaaggtc gccgtcacgg
     2221 ccgcctcctc gggtgacgtg ccccgcccgc tcagccggaa ccggccgctc agcggcgcga
     2281 cgacggtgtc tcccatcagc cggccgaggt ccacccgatc gatcgtgccg cgccgcacct
     2341 ggtaggtgac ggtgtcgccg agacgggcgg tggctatccc cccgatcgtc ccgccggcca
     2401 ccaggagctc gggccggagc tcgagacgtc cggcgaccaa gcggatcccg gcgtcgccca
     2461 ggggcacgcg ctcgccgccg cgcttcacgg ccgcgagacg gatctcaccc cgcaggtcgg
     2521 cctcccgagg aacgacgccg ttgcccctca ggctgaaccg caggtcgagc tggggctcgc
     2581 cgtcctcccc cgccagcgtg ctcgccaccg cctcggtgcc ctcgagaccg agcgcgccgc
     2641 cggcgaggct ataagacggc accgagtcga acggtctcgc ccatccctcc ccgcggacac
     2701 tgccgccgag cagctctccg cggagcctca agtcggcc
//
LOCUS       DASUYN010000225         3793 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1395950, whole genome shotgun sequence.
ACCESSION   DASUYN010000225 DASUYN010000000
VERSION     DASUYN010000225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3793)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3793)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3793
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1395950"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1978)
                     /locus_tag="VF061_04515"
     CDS             complement(<1..1978)
                     /locus_tag="VF061_04515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668793.1"
                     /translation="MTAGALALGLLLQAAQAAPVLSFPEPGLDDPSAYQGYQTRFYRD
                     ARRNAVQIYLEPTGGRVVLVWADAANESVGFTVRDGAGKPVPVTWGAEQAEVTASGST
                     RSIEYRLTVQAPRIELGWFVLGSMRIERDFVYAQRHLLPFSAPPFTVAEESLLVAGVG
                     RLPMGERREHLALLGAATVDELRARLLPAISSTRRGDGWLVRVERPSLDGWNRLRLEL
                     RTDPRDSVTRPTPRAVGIRSGSGGALNLRVRVTTDAEALTPLDRDEIFNAEFHRFLAE
                     ASRASDSAGRVRYRRLERQVRGVELLSSREKLMAGLPNFATYFGRDMMMAALMMEPVW
                     TPAMSEHVIASVLRKLGPGGAVSHEEALGGQAIREHAVVYDSLLAAAAGATRAGRRAE
                     ADTLLAAARDVLRHLQRTRENYHMIDDEYQLPVLAARWLADSAVPRERKRAFLSTPEG
                     GGESRLARLLRELALVAEQSRAYVDDPRPRNLVSFPLRDSVHRRSASWRDSDAGYAGG
                     RFAMDVNAIWVPEALDATATILAALPALGVSRRALDSLVPGLGGTALGSYLGDTLSLR
                     RAVDTWRGARRHFEVTLAPRAIRQRLDAKLAWLPADERRYWERTLRAAGEPRDTLAFL
                     ALSLDEAGQPIPVVNTDPATGLFLGSFGSPADLAS"
     gene            complement(1975..>3793)
                     /locus_tag="VF061_04520"
     CDS             complement(1975..>3793)
                     /locus_tag="VF061_04520"
                     /inference="COORDINATES: protein motif:HMM:NF015588.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668794.1"
                     /translation="TARTTYEWSNGARRTGVAVETFVSRADSHLAALRLDLTPRERGR
                     IRVRFALVGRPPPERLPLATLPRADPAWRPPDIWYPGHMVVRSRTAGRAPGGARLSLT
                     STPTGRTLVLAQAATVRWPGGLSGAAARTRAAGDTALVELAFDAEGGRTYSFTQITAF
                     VSGQEPRAAAGRESEAARARGWEKLAAENALAWGRRWETDIEVHGDSALQRVVRSMLF
                     YLLASASEGTGLGIPPMGLSGGGYYGHIFWDSDTWMFPPLLVTHPDVARSLVAFRRRT
                     LDAALANANANGFRGAMYPWEADERGQETTPHFAVQNAKMEIHVNGDVALAQWQYYQV
                     TGDSAWLATEGYPVIRETADFWVSRVRRDSARDRYHIDSVVSVHEGLIGVSDDAYTNA
                     VARKNLEIAVAASARLGAKADARWGEVAAKLHLPYDSASEYYRTYEGAPDSTLGAVTP
                     LLSYPLGVPMSERAKRAQLQQAVRRLLAEGPGAMMGSTLLAVDAAELGDRALLDSLLP
                     HSYEGHLRGPFLMLSETPRNDAVNFVTGAGGFLQQVIFGYTGLRIGDGGLEPAFEPLL
                     PSKVTRLVLRNVYSRGRRFDVVVDSTGRRMVPRDGGGPR"
BASE COUNT          526 a         1388 c         1392 g          487 t
ORIGIN      
        1 aggacgcgag gtcggcgggc gacccgaagc tccccaggaa gagtccggtg gcggggtcgg
       61 tgttgacgac ggggatgggc tggccggcct cgtcgagcga gagggcaagg aacgccaggg
      121 tgtcgcgggg ctctcccgcg gcgcgcaggg tccgctccca gtatcggcgc tcgtcggccg
      181 ggagccaggc gagcttcgcg tcgagccgct gccggatggc gcgcggtgcc agggtgacct
      241 cgaaatgccg ccgcgcgccg cgccaggtgt ccaccgccct gcggagcgac aacgtgtcac
      301 cgaggtagct ccccagcgcc gtcccgccga gaccgggcac caggctgtcc agcgccctgc
      361 gactcacccc caacgccggc agcgcggcca ggatggtcgc ggtcgcatcg agcgcctccg
      421 gcacccagat ggcgttgacg tccatggcga accggccgcc ggcgtagccc gcgtcgctgt
      481 cccgccagct ggcggagcgc cggtgcaccg agtcgcgcag cgggaagctc accaggttgc
      541 gcgggcgagg gtcgtccacg taggccctgg actgctcggc gaccagcgcc agctcccgga
      601 gcagccgggc gagccgcgac tcgccacccc cctcgggggt cgacagaaag gcgcgtttcc
      661 gctcgcgagg cacggccgag tcggccagcc agcgcgcggc gagcaccggg agctggtact
      721 catcgtcgat catgtggtag ttctcgcggg tccgctgcag gtggcggagg acgtcccggg
      781 cggccgccag cagggtgtcg gcctcggccc ggcgcccggc gcgggtcgcc cccgcggccg
      841 ctgccaggag cgagtcgtac accaccgcgt gctcccggat cgcctggccg ccgagggctt
      901 cctcgtgact cacggcgccg ccgggcccca gcttccggag cacgctggcg atcacgtgct
      961 ccgacatggc cggcgtccac accggctcca tcatcagcgc ggccatcatc atgtcgcggc
     1021 cgaagtaggt ggcgaagttg gggaggccgg ccatcagctt ctcccgcgag ctcagcagct
     1081 cgacgccccg cacctgccgc tccagccggc ggtaacgcac ccggcccgcg ctgtcgctcg
     1141 cgcgcgaggc ctcggccagg aaccggtgga attccgcgtt gaagatctcg tcgcggtcca
     1201 gcggcgtgag ggcctcggca tcggtggtca cccgaacgcg gagattcagg gctccgcccg
     1261 agcccgagcg gatcccgacg gcgcggggag tcggtcgggt gacagagtcc cgcgggtcgg
     1321 tacgcagctc cagccggagc cggttccacc cgtcgagcga aggccgctcg acccggacca
     1381 gccagccgtc cccccggcgc gtcgagctga tggcgggcag gagccgcgcg cgcagctcgt
     1441 ccaccgtcgc ggcgccgagc agcgccaggt gctcgcggcg ctcgcccatc gggagccggc
     1501 cgacacccgc gaccaggagc gactcctcgg cgaccgtgaa cggcggcgcg ctgaacggca
     1561 ggaggtgccg ctgggcgtac acgaagtcgc gctcgatccg catcgagccc agcacgaacc
     1621 agcccagctc gatcctcggc gcctggacgg tcagccggta ctcgatgctg cgggtagatc
     1681 cggaggcggt gacctccgcc tgctccgcac cccaggtgac cggcaccggc ttccccgctc
     1741 cgtcccgcac cgtgaagccg acgctctcgt tcgcggcgtc cgcccatacc agtaccacgc
     1801 ggccgcctgt cggctccagg tagatctgca ccgcgttccg cctggcgtcg cggtagaagc
     1861 gggtctggta tccctggtag gcggaggggt cgtccagccc cggctcggga aacgagagca
     1921 cgggcgcggc ctgcgccgcc tggaggagga gcccgagagc gagcgcgccg gcggtcaccg
     1981 cggcccgccc ccgtcgcggg gaaccatccg gcggccggtc gagtccacca ccacgtcgaa
     2041 gcggcggccc cggctgtaga cgttccgcag gaccagccgg gtcaccttcg acggcaggag
     2101 cggctcgaag gccggctcca gcccgccgtc gccgatgcgg aggccggtgt agccgaagat
     2161 cacctgctgg agaaagcctc cggcgccggt cacgaagttc accgcgtcgt tcctgggcgt
     2221 ctcggagagc atcaggaacg gtccccgcag gtgtccttcg tagctgtgcg gcagcagcga
     2281 gtccagcagc gcccggtccc ccagctcggc cgcgtccacc gcgagaagcg tggagcccat
     2341 catcgcaccc ggtccctcgg ccagcaggcg gcgcaccgcc tgctggagct gcgcccgctt
     2401 ggcccgctcg ctcatgggga cgccgagggg atagctgagc agcggcgtga cggccccgag
     2461 cgtggagtcg ggcgcaccct cgtaggtgcg gtaatactcg ctggcggagt cgtagggcag
     2521 gtggagcttc gccgccacct cgccccagcg ggcatcggcc ttcgcaccca ggcgggcact
     2581 ggccgcgacg gcgatctcca ggttcttgcg cgcgacggcg ttggtatagg cgtcgtcgct
     2641 cacaccgatc aggccctcgt gcaccgagac cacgctgtcg atgtggtagc ggtcccgggc
     2701 cgaatcgcgc cgcacccgac tcacccagaa gtcggcggtc tcccggatga cgggataacc
     2761 ctccgtggcg agccaggccg agtcgccggt gacctggtag tactgccact gcgcgagggc
     2821 gacgtcgccg ttgacgtgga tctccatctt cgcgttctgc accgcgaagt gcggcgtggt
     2881 ctcctgcccc cgctcgtcgg cctcccaggg atacatcgcc ccgcgaaacc cgttcgcgtt
     2941 ggcgttcgcc agcgccgcgt ccagtgtgcg gcggcggaag gcgaccagcg aacgggcgac
     3001 gtcggggtgg gtgacgagca gcggcgggaa catccaggtg tcggagtccc agaagatgtg
     3061 tccgtagtag ccgccaccgg agagtcccat cgggggaatg ccgagcccgg tgccctcgga
     3121 cgcgctggcg agcaggtaga agagcatgga gcgcaccacc cgctggaggg cgctgtcgcc
     3181 atggacctcg atgtcggtct cccaccggcg tccccacgcg agggcattct ccgcggcgag
     3241 cttctcccag ccgcgggccc gggcggcctc cgactcgcgg cccgccgcgg cacgtggctc
     3301 ctggccgctc acgaaggccg tgatctgggt gaacgagtag gtccggccgc cctccgcgtc
     3361 gaaggcgagc tccaccagtg ccgtgtcgcc cgccgctcgg gtccgcgccg cggcgcccga
     3421 gagaccgccg ggccagcgga cggtcgcggc ctgggccagg accagagtcc gccccgtggg
     3481 ggtggaggtg agcgatagcc gggccccacc aggtgcgcgg ccggccgtcc gcgagcggac
     3541 gaccatgtga cccgggtacc agatgtcggg cgggcgccat gcgggatccg ccctcggcag
     3601 ggtggccagg ggcagccgct ccggcggcgg gcggccgacc agcgcgaagc gcacccggat
     3661 ccggccgcgc tcgcgggggg tgagatcgag tcgcagcgcg gcgaggtgcg agtccgcccg
     3721 ggagacgaac gtctccaccg ccacgccggt gcgtcttgcc ccgttcgacc actcgtaggt
     3781 ggtccgggcc gtg
//
LOCUS       DASUYN010000226         2625 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1177052, whole genome shotgun sequence.
ACCESSION   DASUYN010000226 DASUYN010000000
VERSION     DASUYN010000226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2625)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2625)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2625
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1177052"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..895)
                     /locus_tag="VF061_04525"
     CDS             complement(<1..895)
                     /locus_tag="VF061_04525"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX6668795.1"
                     /translation="MREGTSHCPRCGPGSLALFGTEVSALDPHPAGETHALDRLQRAL
                     GRQFRVVRLIGRGGFAEVFEVVDTDLQRRLAVKVLRSDLPWSAATITRFKHEARAIAR
                     LSHPNTVPIHFVGEGEGLVYYAMPYLEGRTVTDLLRAEGALSADHALRIVEPVLDALQ
                     HAHEHGLVHRDVKPDNILLESGTGRPLLVDFGIVKYLDGPAHLTEAGYIVGTPLYMSP
                     EQALGSRSVDARSDVYGMGAVLFQLLTGAPPFEGTDSQEIVGRHIREPVPSASLSRDN
                     VPPWVKALVLRCMAKHPDDRYA"
     gene            1399..>2625
                     /gene="glnA"
                     /locus_tag="VF061_04530"
     CDS             1399..>2625
                     /gene="glnA"
                     /locus_tag="VF061_04530"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HEX6668796.1"
                     /translation="MATTAKPTTFTRTSGTGEVQQVLDLVRDRKLQVVDVKFCDLPGT
                     WQHFSIPASALDEDVFRDGLGFDGSSIRGFQAINESDMLLLPDPASAFVDPVLEVPTL
                     SLTCDIYDPITLEPYSRDPRFIAFKAEEYLRTTGIATTSFWGPEAEFFIFNSVRFDQN
                     AHEGYYHIDSEEGVWNSGRNGAPNLGHRPRFKEGYFPVPPVDRLQDVRSKIMLALIEA
                     GIPVEVQHHEVATAGQAEIDIRFGTLVQTADRLLTYKYIVKNVCHRLGYTATFMPKPL
                     FGDNGSGMHCHQSLWNGESPLFFDERGYAGLSEMARYYIGGLITHAPALLALCAPTTN
                     SYRRLVPGFEAPVNLMYSARNRSAICRIPMYSNSPRAKRVEFRAPDPTANPYLAFSAM
                     LMAGLDGIQRKLEPPAP"
BASE COUNT          423 a          914 c          880 g          408 t
ORIGIN      
        1 aggcgtagcg gtcgtcggga tgcttggcca tgcagcgaag aaccagcgcc ttgacccagg
       61 gcggcacgtt gtcgcgagac aggctcgccg aggggaccgg ctcgcggatg tggcggccga
      121 cgatctcctg ggagtcggtc ccctcgaacg ggggcgcccc ggtgaggagc tggaagagca
      181 ccgcgcccat gccgtagacg tcgctccgcg cgtccacgct gcggctcccc agggcctgct
      241 cgggactcat gtagagcggg gtgcccacga tgtatccggc ctcggtgaga tgcgccggcc
      301 cgtccaggta cttcacgatc ccgaaatcca ccagcagcgg gcggccggtc cccgactcga
      361 gcaggatgtt gtcgggtttc acgtcccggt ggaccaggcc gtgctcgtgg gcgtgctgga
      421 gcgcatcgag gacgggctcg acgatccgga gggcgtgatc cgccgacagc gccccttcgg
      481 cccggagcag gtccgtcacg gtgcggccct cgaggtaggg catggcgtag tacaccagcc
      541 cttcgccttc gccgacgaag tggatcggca ccgtgttagg gtggctgagc cgcgcgatgg
      601 cgcgggcctc gtgcttaaac cgggtgatgg tggcggcgct ccaggggagg tcggagcgga
      661 ggaccttcac ggccagccgg cgctgaaggt ccgtgtccac cacctcgaag acctcggcga
      721 acccgccgcg cccgatcaga cggacgaccc ggaactggcg gccgagcgcc cgctgcaggc
      781 ggtcgagcgc gtgggtctcg ccggccgggt ggggatcgag cgcggacacc tcggtgccga
      841 agagcgcgag gctccccggc ccacagcggg ggcagtgcga tgtgccctcg cgcaacaggg
      901 cgtggcagga cgagcagacc agtaccgtca gagcgcctcc ggaggccgtg cacccgcgac
      961 tcgcctgaac attaacgcca attccgggcc atgacccgtg caccccgccc ggcggcggga
     1021 ggagtccgcc gatgttctgg tgtatgacgt ggaaccctgt ccgtgcacaa taagcaggct
     1081 tcccggtacg acgcgttgga aactggcgtg tacccgcaga gatgtagcgg gattcatgcc
     1141 agttgtgcag gattgccttg acactcgtag ttccgggagg tatcctcatg gcagcgccgt
     1201 caaccgtcac ccagagtccc gatgccgccg aagctccgcc cccaagccag cgcccaggtc
     1261 caccgaaacc gccggttccc tcccaggcga gcgcgcgggc ccttggcgtg agcggacttc
     1321 gctcgaccgg acgcccctga gcccgcccgc ggcgactcag gggcgtcgct cttttccact
     1381 atcccgcacg aggagtccat ggccaccacc gccaagccga cgacgttcac ccggacctcc
     1441 gggaccgggg aggttcagca ggtcctcgat ctcgtccgtg accggaagct tcaggtcgtg
     1501 gacgtgaagt tctgtgacct gcccggcacg tggcagcact tctccatccc ggcgagcgcc
     1561 ctggacgagg atgtgttccg cgacgggctg ggcttcgacg ggtcgtccat ccgcggattc
     1621 caggcgatca acgagagcga catgctgctc ctgccggatc ccgccagtgc cttcgtggat
     1681 ccggtgctgg aggtgccgac cctctcgctc acctgcgaca tctacgaccc gatcacgctg
     1741 gagccctact cccgcgatcc ccggttcatc gccttcaagg cggaggagta cctgcggacg
     1801 accggcatcg cgaccacgtc cttctggggg ccggaggcgg agttcttcat cttcaactcg
     1861 gtgcggttcg accagaacgc gcacgagggg tactaccaca tcgactccga ggaaggggtc
     1921 tggaattccg gccgcaacgg ggcgcccaac ctggggcacc ggcctcgctt caaggaggga
     1981 tatttcccgg tgccgccggt ggaccggctg caggacgtgc gcagcaagat catgctcgcg
     2041 ctgatcgagg cgggcattcc ggtggaggtg cagcaccacg aggtggccac ggcgggccag
     2101 gcggagatcg atatccggtt cggcaccctg gtgcagaccg ccgaccgcct gctcacctac
     2161 aagtacatcg tgaagaacgt ctgtcaccga ttgggctaca ccgccacgtt catgcccaag
     2221 ccgctcttcg gcgacaacgg ctcggggatg cactgccacc agtcgctctg gaacggcgag
     2281 tcgccgctct tcttcgacga gcgcggctac gcggggctct cggagatggc gcgctactac
     2341 atcggcggtc tcatcaccca tgccccggcg ctgctcgccc tctgcgcccc caccaccaac
     2401 agctaccgcc ggctggtgcc cggcttcgag gcgccggtca acctcatgta ctcggcgcgc
     2461 aaccggtcag ccatctgccg gattccgatg tactccaaca gcccgagggc caagcgggtg
     2521 gagttccggg ccccggaccc cacggccaac ccctatctcg ccttctcggc gatgctcatg
     2581 gccggcctcg acggcatcca gcggaagctc gagccgcccg cgccg
//
LOCUS       DASUYN010000227         3095 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_515702, whole genome shotgun sequence.
ACCESSION   DASUYN010000227 DASUYN010000000
VERSION     DASUYN010000227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3095)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3095)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3095
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_515702"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..976
                     /gene="glnA"
                     /locus_tag="VF061_04535"
     CDS             <1..976
                     /gene="glnA"
                     /locus_tag="VF061_04535"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HEX6668797.1"
                     /translation="GYYHIDSEEGVWNSGRNGTPNLGHRPRHKEGYFPVPPSDRLQDV
                     RSKIMLALIEAGVPVEVQHHEVGTAGQAEIDIRFGTLVQTADRMMIYKYLVKNVCHRL
                     GYTATFMPKPLFGDNGSGMHCHQSLWNGNSPLFFDEGGYALISELARYYIGGLIAHAP
                     ALLALCAPTTNSYRRLVPGFEAPVNLMYSARNRSAICRIPMYSSSPKTKRVEFRAPDP
                     SANPYLAFAAMLMAGLDGIQRKLEPPPPIDEDLYELHDERKASIKMVPGSLPESLDAL
                     EQDHDFLLKGDVFTPDVIETWISMKRSKDVAAVNLRPHPYEFFLYYDA"
     gene            1088..2764
                     /gene="ilvD"
                     /locus_tag="VF061_04540"
     CDS             1088..2764
                     /gene="ilvD"
                     /locus_tag="VF061_04540"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF002068.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004160 - dihydroxy-acid dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009099 - valine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEX6668798.1"
                     /translation="MTSHLRSSAITEGVQRAPNRAMLRAVGFQDADFGKPIVGIASGW
                     STITPCNAGLDLLARRAESAARASGAMPQVFGTITVSDGISMGTEGMKYSLVSREVIA
                     DSIETACGAQSMDGVLAIGGCDKNMPGAMIAIARMNIPAVFVYGGTIKPGHYAGRDLT
                     VVSAFEAVGQHSAGKIDDRELLEVERRACPGKGSCGGMFTANTMSSVFEAMGMSLPSS
                     STMAAEDEEKADSAAASAEALVRAVHDGLTPRRILTRNAFENGIAVVMALGGSTNAVL
                     HLLAIARAAEVPLELDDFERIRSRVPVLCDLKPSGRFVATDLHRAGGVPQVMRILLEH
                     GVLHGDALTVTGRAVEATLRDLPAEPRADQEVIRPWSRPLYRQGHLAILRGNLAPEGS
                     VAKITGVKSPRITGPARVFESEEACLEAILAGRIRSGDVVVIRYEGPRGGPGMREMLA
                     PTSALIGAGLGESVGLVTDGRFSGGTYGLVVGHVAPEAAMGGPIALVREGDSITIDAE
                     RRLLALDLPDAELDRRRAGWSPPPPRYTAGVLFKYARQVSSASLGAVTDL"
     gene            complement(2796..>3095)
                     /locus_tag="VF061_04545"
     CDS             complement(2796..>3095)
                     /locus_tag="VF061_04545"
                     /inference="COORDINATES: protein motif:HMM:NF012407.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /protein_id="HEX6668799.1"
                     /translation="GDGPGLFEPVHGSAPDIAGRGVANPIGAIASAAMLLRHGLGLPE
                     AASAVEHAVGAVLGAGARTADIARSGEPVMGTREIGDEIARLVLWGKAVEPVLGP"
BASE COUNT          473 a         1095 c         1080 g          447 t
ORIGIN      
        1 ggggtactac cacatcgaca gcgaagaggg agtctggaac agcggccgga acggcactcc
       61 gaacctcggg caccgccccc ggcacaagga gggctatttc ccggttccgc cgagcgaccg
      121 gctgcaggac gtgcgctcga agatcatgct ggcgctgatc gaggccgggg tgccggtcga
      181 ggtccagcac cacgaggtgg gcaccgccgg ccaggcggag atcgacatcc ggttcggcac
      241 cctggtgcag accgccgatc ggatgatgat ctacaagtac ctggtgaaga acgtctgtca
      301 ccggctgggc tacacggcga cgttcatgcc caagccgctg ttcggcgaca acgggtcggg
      361 gatgcactgc caccagtcgc tctggaacgg caacagcccg ctcttcttcg acgagggcgg
      421 ctatgccctg atctccgagt tggcccggta ctacatcggc gggctcatcg cccacgcgcc
      481 ggccctgctc gcgctgtgcg ccccgaccac caacagctac cgccggctgg tgcccggctt
      541 cgaggctccg gtcaacctga tgtactccgc ccggaaccgg tcggcgatct gccggatccc
      601 gatgtactcg agctcgccca agacgaagcg ggtcgagttc cgcgcgccgg atccttcggc
      661 caacccgtac ctcgccttcg ccgccatgct gatggcgggt ctcgacggca tccagcggaa
      721 gctcgagccg cccccgccga tcgacgagga cctctacgag ctgcacgacg agcggaaagc
      781 cagcatcaag atggtccccg gctcgctgcc cgaatcgctc gacgccctgg agcaggacca
      841 cgacttcctg ctcaagggcg acgtcttcac gccggacgtg atcgagacct ggatctcgat
      901 gaagcggagc aaggacgtcg cggcggtcaa cctgcggccg catccgtacg agttcttcct
      961 gtattacgac gcgtgagcgg tgaggcggta aggcggtaag ggcggtaggg acggtccgcc
     1021 ctaccgcctt accgtcttac cgccttccgc cttaccgcct tccgccttac cacctaccat
     1081 tcccaccatg acatcgcacc tccgcagctc cgccatcacg gaaggcgtcc agcgcgcccc
     1141 caaccgcgcc atgctgcgcg cggtcgggtt tcaggatgcc gacttcggga agccgatcgt
     1201 gggcatcgcg agcgggtgga gcaccatcac cccctgcaat gccggcctcg acctcctcgc
     1261 ccgccgggcg gagagcgccg cgcgcgcgag cggcgcgatg ccccaggtgt tcgggacgat
     1321 caccgtgagc gacgggatct cgatggggac ggaaggcatg aagtactccc tggtctcccg
     1381 cgaggtgatc gccgattcga tcgagacggc gtgcggagcc cagagcatgg atggtgtgct
     1441 cgccatcggc gggtgcgaca agaacatgcc gggcgcgatg atcgccatcg cccggatgaa
     1501 catccccgcg gtcttcgtct acggcggcac catcaagccc ggccactatg cgggtcgtga
     1561 cctcacggtg gtgagcgcct tcgaagcggt gggacagcac agcgcgggga agatcgacga
     1621 ccgcgagctg ctcgaggtcg agcgccgcgc ctgtccgggc aagggctcct gcggcgggat
     1681 gttcaccgcg aacaccatgt cctcggtctt cgaggccatg gggatgagcc tgccctcctc
     1741 ctccaccatg gcggcggagg acgaggagaa ggcggacagc gcggccgcct cggccgaagc
     1801 gctggtccgg gcggtccacg acgggctcac gccccgccgg atcctcaccc ggaacgcgtt
     1861 cgagaacggc atcgccgtgg tgatggcgct gggtggctct accaacgccg tgctccacct
     1921 gctcgccatc gcccgggcgg cggaggtgcc gctcgagctc gacgacttcg agcggatccg
     1981 cagccgggtg cccgtgctct gcgatctcaa gccgtccggg cggttcgtcg ccaccgacct
     2041 gcaccgcgcg ggcggcgtac cccaggtgat gaggatcctg ctcgaacacg gagtgctgca
     2101 cggcgacgcg ctgacggtca ccggccgggc ggtggaggcc acgctgcggg acctgcccgc
     2161 cgagccgcgc gcggaccagg aggtgatccg gccctggagc cggcccctgt accggcaggg
     2221 gcacctggcg atcctgcgcg gcaacctggc accggaaggg tcggtcgcga agatcaccgg
     2281 cgtgaagtcg ccgcggatca ccggaccggc ccgggtgttc gagtcggagg aggcgtgcct
     2341 ggaggcgatc ctcgcggggc ggatccggtc cggcgacgtc gtggtgatcc ggtacgaagg
     2401 tccgcgaggg ggtccaggga tgcgggagat gctcgcgccc acctcggccc tgatcggcgc
     2461 ggggctcggc gagtccgtcg gtctggtcac cgacgggcgc ttctcgggag gcacctacgg
     2521 tctggtggtg gggcacgtcg cgccggaggc ggcgatgggc ggaccgatcg cgctggtgcg
     2581 cgagggcgat tcgatcacga tcgacgccga gcgcaggctg ctggcgctgg acctgcccga
     2641 cgccgagctc gatcggcggc gggcggggtg gagccccccg ccgccgcgct acaccgcggg
     2701 cgtgctcttc aagtacgcgc ggcaggtctc gagcgcgagc ctgggagccg tcacggatct
     2761 ttgaagcgct gacggcgggg ggccgcgact ctcgctcacg gtcccagcac cggctccacc
     2821 gctttgcccc agaggaccag ccgcgcgatc tcgtcaccga tctcccgggt gcccatcacg
     2881 ggctccccgc tccgtgcgat atcggcggtg cgcgcgccgg cccctagcac cgccccgacg
     2941 gcgtgctcca ccgccgacgc cgcctcgggc agtcccagcc cgtgccggag cagcatcgcg
     3001 gcgctggcaa tggcgccgat cgggttggcg accccccgtc ccgcgatgtc gggcgcggag
     3061 ccgtgcaccg gctcgaacag ccccggcccg tcgcc
//
LOCUS       DASUYN010000228         2376 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1177797, whole genome shotgun sequence.
ACCESSION   DASUYN010000228 DASUYN010000000
VERSION     DASUYN010000228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2376)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2376)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2376
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1177797"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            194..>2376
                     /locus_tag="VF061_04550"
     CDS             194..>2376
                     /locus_tag="VF061_04550"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEX6668800.1"
                     /translation="MGPGPLRILILEDVAMDAELVEYELERARVPFAARRVDTRESFL
                     RELDAFRPDVILSDFTLPRFDGMTALSLARERAPAVPFLIVTGSVNEETAVGCMKAGA
                     TDYLLKSNLARIGPAIEGALARVRARSEKARAEAALRRSEANLRAIFNNSLQAFVLIT
                     PDGVIQALNSTAVEWSTRLLGQPLREGGRIAEFVPEARRAFRAALGGETGNLERGFRD
                     TDGSERWFETTHAPVVDEEGSIIGVCLNARDITTRKQAERALRESEARYRDLFDNASD
                     LVCATDPDGTLLYVNRAWHDTMGLSEVELGRRFIEVVHPDSRERYAEVVARVLAGETL
                     THVVLVLVTAAGSSITVEGNLSCTLADGRPVMVRGIYRDITERRRAEEQLRQAERMQA
                     AGRLAGGMAHEVNNMMTGVLGFSQFLLRSFGEDDPRREEVEEIIRAGTRASDVTRQLL
                     AFTRQQVLHPEMLDLNAVVSGVEKMLRRTLGENHVLELTLATEVGQIRADRGQLEQVL
                     VNLVLNARDAMRERGRVTLTTSGAALDEVYAQAHGGVGIPPGDYVCLAVTDTGVGMDA
                     ATQARIFEPFFTTKPVGQGTGLGLSTVYGIVKQSDGFIWCYTEPGLGTTFKIYLPRAG
                     ARVTPVPPARPAVELRGGQETILVVEDEDVVRALACRGLREHGYTVLEARHGLEALEQ
                     VERNHRPIDLVISDVVMPELSGRELGTRLGALRPELPILYMSGYTG"
BASE COUNT          365 a          824 c          856 g          331 t
ORIGIN      
        1 tagggtgaac cggaaacgat gggacagcag ggtgggcacc tgccgtgacg cgtatcaccg
       61 gtggcgggcc cgatgggaag gacccgcggc gtgcttgact tcgaatatat tgctgcgact
      121 cttcagcgtg ccaccaatcg cgaaatcttc agccggcgcg accggctccg cacccgacgg
      181 cacgggggcg cacatgggac ccggacccct ccgcatcctc atcctcgagg atgtcgccat
      241 ggatgccgag ctcgtggagt acgagctcga gcgggcccgc gtccccttcg ccgcgcgccg
      301 ggtggacacc cgcgagtcgt tcctccgcga gctggacgcc ttccgccccg acgtcatcct
      361 ctccgacttc accctgccgc ggttcgacgg catgaccgcg ctgtcgctcg cccgggagcg
      421 cgcgcccgcg gtcccgtttc tcatcgtcac cggctcggtg aacgaggaga ccgcggtcgg
      481 ctgcatgaag gccggggcca ccgactatct cctcaagagc aacctcgcgc ggatcggacc
      541 cgccatcgag ggcgccctgg cacgggtgcg ggcccgcagc gagaaggccc gggcggaggc
      601 ggcgctgcgc cgatcggagg cgaacctccg ggccatcttc aacaacagtc tccaggcgtt
      661 cgtcctcatc acccccgatg gcgtgatcca ggcgctcaac tccaccgcgg tggagtggag
      721 tacccggctg ctgggccagc cgctgcggga aggcgggcgg atcgccgagt tcgtgcccga
      781 ggcccggcgg gccttccgcg cggccctggg aggggagacc ggcaacctgg agcgcggctt
      841 ccgcgacacc gacgggtcgg agcgctggtt cgagaccacc cacgccccgg tggtggacga
      901 ggagggaagc atcatcggcg tctgcctgaa cgcccgcgac atcaccaccc gcaagcaggc
      961 ggagcgggcg ctgcgcgaga gcgaggcgcg ctaccgcgac ctcttcgaca acgcgagcga
     1021 cctggtgtgc gccaccgacc ccgacggcac gctgctgtac gtgaatcgcg cctggcacga
     1081 cacgatgggc ctctccgagg tggagctcgg gcgccggttc atcgaggtgg tccatccgga
     1141 cagccgggag cgctatgcgg aggtggtggc ccgggtgttg gcgggcgaga cgctgaccca
     1201 cgtggtgctg gtcctggtga ccgcggccgg ctcgtccatc accgtcgagg ggaatctcag
     1261 ctgtacgctc gcggacggcc ggccggtcat ggtccggggg atctaccgcg acatcaccga
     1321 gcggaggcgg gcggaggagc agctccgcca ggccgagcgg atgcaggcgg cgggccggtt
     1381 ggccggcggg atggcccacg aagtcaacaa catgatgacc ggggtcctgg ggttcagcca
     1441 gttcctgctc cgcagcttcg gggaggacga cccgaggcgc gaggaggtgg aggaaatcat
     1501 ccgggccggg acccgcgcct ccgacgtcac ccgccagctc ctcgccttca ccaggcagca
     1561 ggtgctccat cccgagatgc tcgacctgaa cgccgtggtg agcggcgtgg agaagatgct
     1621 ccgccgcacg ctgggcgaga accatgtcct cgagcttacg ctggcgaccg aggtggggca
     1681 gatccgagcc gaccggggac agctcgagca ggtgctggtc aacctcgtgc tcaacgcccg
     1741 ggacgccatg cgcgagcggg gacgggtcac cctcaccacc agcggcgccg cgctggacga
     1801 ggtctacgcc caggcccacg gcggggtcgg gattccaccc ggcgactacg tctgcctcgc
     1861 ggtgaccgac accggggtgg gcatggacgc tgcgacccag gcccggatct tcgagccgtt
     1921 cttcaccacc aagccggtgg gccagggcac cggcctcggg ctctcgaccg tgtacggcat
     1981 cgtgaagcag agcgacggct tcatctggtg ctacaccgag cccgggctgg gcacgacctt
     2041 caagatctat ctcccccgcg ccggcgcccg ggtgaccccg gtcccccccg cccggcctgc
     2101 ggtcgagctc cgcggtggcc aggagaccat tctggtggtg gaggacgagg acgtggtgcg
     2161 cgcgctggcc tgccggggcc tgcgcgaaca tggctacacg gtgctggagg cgcgacacgg
     2221 cctggaggcg ttggagcagg tggagcggaa ccatcggccg atcgacctcg tgatctccga
     2281 cgtcgtgatg ccggagctga gcggccgcga gctcggcacc cgcctcggcg cgctgcgccc
     2341 cgagctgccg atcctgtaca tgtccgggta cacggg
//
LOCUS       DASUYN010000229         2033 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1397562, whole genome shotgun sequence.
ACCESSION   DASUYN010000229 DASUYN010000000
VERSION     DASUYN010000229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2033)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2033)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2033
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1397562"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            58..963
                     /locus_tag="VF061_04555"
     CDS             58..963
                     /locus_tag="VF061_04555"
                     /inference="COORDINATES: protein motif:HMM:NF020939.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HRDC domain-containing protein"
                     /protein_id="HEX6668801.1"
                     /translation="MTSWSVTETTARVLRRAVESGETRLGEGPPPVDMAARALKARRD
                     RERLDTMVRYAYSRGCRTRFIYDYFAGGARGGVAPRCGVCDVCLGWRRGAGRALQDDE
                     LLQVRIALSGVGRLSGRFGVERVAQVLVGGRGREVLDRCLDRIPTYGKLSALPLDYVK
                     DLLGVLADAGLVERQGIEGGRPGAFVLALTPEGRAVARGERRPELDLPVRGGSRKRTP
                     NATAAAADPDPAAADPELMLRLKAWRTEEARRRSVPPYVIFHDRTLAAIAAARPRTPG
                     ELTRIKGVGPAKLAAYGDALLQLVG"
     gene            complement(960..>2033)
                     /locus_tag="VF061_04560"
     CDS             complement(960..>2033)
                     /locus_tag="VF061_04560"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX6668802.1"
                     /translation="LLVWTYLPNYICAFLAVLSSRIIGHLGRKVRRARQYGSYRLVER
                     IGRGGMGEVWKAEHQLFARPAAIKLIAAHGMLDGSDGIAEERFRREAQVAAGLRSPHT
                     IQLYDFGITRDRRLYYVMELLDGCDLDSLVSRYGTQPPARVANILRQACHSLAEAHAA
                     GLVHRDIKPANLYIGRGGLEYDFVKVLDFGLVKQQAGVVPDGDIRLTAPEALSGTPAY
                     IAPEVAAGEAVDSRADLYALGCVGYVLVTGALVFEGENAMQLILKHIRSEPVRPSVRL
                     GKPIPVGLERLLMQCLEKDPADRPPSAAALSTALSDAGADEWTQGEARRWWETTFTPA
                     PPREPRTEPPTELLEVAGGRDGP"
BASE COUNT          294 a          712 c          721 g          306 t
ORIGIN      
        1 tcccagagcg tctcgtgatc gacgccatca agggcccgtg cggccgcggg gttggtgatg
       61 accagctggt cggtcaccga gaccacggcg cgggtgctgc gccgggcggt ggaaagcggc
      121 gaaacacggc tgggggaggg gccgcctccg gtggacatgg cggctcgggc gctcaaggcc
      181 cgccgggatc gcgagcggct cgacaccatg gtccgttacg cctactcgcg gggctgccgc
      241 acccggttca tctacgacta cttcgctggc ggcgcccgcg gcggcgtggc gccccgctgt
      301 ggcgtctgcg acgtgtgtct cggctggcgc cggggcgccg gtcgagcgct ccaggacgac
      361 gagcttctcc aggtgaggat cgcgctctcg ggtgtgggca ggctctccgg ccggttcggt
      421 gtcgagcggg tggcacaggt cctggtaggg ggccggggca gggaagtgct ggaccgctgt
      481 ctcgatcgca tcccgaccta cggcaaactc tcggcgctcc cgctggacta cgtaaaagat
      541 ctgctgggcg tgctggcgga cgcggggctg gtcgagcggc agggtatcga agggggccgg
      601 ccgggagcgt tcgtcctcgc gctgacgccg gagggcaggg cggtggctcg tggggagcgc
      661 cgtcccgaac tggacctgcc ggtgcgtggc ggctcgcgga agcggacgcc caatgccacg
      721 gccgccgccg cggacccgga tcctgccgcc gccgacccgg agttgatgct gcggctcaag
      781 gcgtggagaa ccgaagaggc tcggcggcgg agcgttccgc cctacgtgat cttccacgat
      841 cgcacgctcg cggccattgc cgccgcccgg ccccggacgc cgggcgagct gacccggatc
      901 aagggcgtcg gcccggccaa gctcgcggcc tacggagatg ccctgctgca gctcgtcggt
      961 taggggccgt cccggccgcc cgccacctcg agcagctccg tcggaggctc ggtccgcggc
     1021 tcgcgcggcg gggccggggt gaacgtggtc tcccaccacc ggcgcgcttc accctgggtc
     1081 cactcgtcgg caccggcgtc ggacaaggcc gtcgacagcg cggccgcgct cggaggacga
     1141 tccgccgggt ccttctccag gcactgcatc agcagccgtt ccagcccgac aggtatgggc
     1201 ttgcccagac gcaccgaagg gcgaaccggc tctgaccgga tgtgtttcag aatcagctgc
     1261 atcgcatttt cgccctcgaa caccagcgct cccgtcacca gcacgtatcc cacgcatccc
     1321 agggcgtaga gatctgcccg cgagtccacg gcctctcccg ccgcgacctc cggcgcgatg
     1381 tacgccggag tgcccgagag cgcttccggc gccgtcagcc gaatgtctcc gtccggcacg
     1441 acgccggcct gttgcttcac cagtccaaag tccaggacct tcacgaagtc gtattccaga
     1501 cccccgcgcc cgatgtagag gttcgccggc ttgatgtcgc ggtgcaccag gccggcggca
     1561 tgggcctccg cgagcgagtg acacgcctgc cggaggatgt tggccaccct ggccggtggc
     1621 tgcgttccgt agcggctcac cagggaatcg aggtcgcagc cgtccagcag ctccatcacg
     1681 tagtacaagc ggcgatcccg ggtgatgccg aagtcgtaca gctggatcgt gtgcggcgag
     1741 cgcagccccg cggcgacctg ggcctccctg cggaagcgct cctcggctat cccgtcggac
     1801 ccgtcgagca tcccgtgggc ggcgatgagc ttgatcgcgg ctggacgcgc aaagagctgg
     1861 tgctccgcct tccagacctc gcccataccg ccacgaccga tacgctccac cagccgatag
     1921 ctcccgtatt gccgggcgcg ccgcaccttc cgacccaggt ggccgatgat cctcgatgac
     1981 agcacggcga ggaaggcgca gatgtagttg ggcagatagg tccacaccag cag
//
LOCUS       DASUYN010000230         8093 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_296283, whole genome shotgun sequence.
ACCESSION   DASUYN010000230 DASUYN010000000
VERSION     DASUYN010000230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8093)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8093)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8093
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_296283"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1119
                     /locus_tag="VF061_04565"
     CDS             <1..1119
                     /locus_tag="VF061_04565"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX6668803.1"
                     /translation="QREPTGRGDPGDVRSAVVHVASGREWRGGQRQVLLLARELARAG
                     LQDQVVVTGAATELGFRLKGEGVRVRETRWQSGLDPRVLLPLLREVRAGAALLHAHDA
                     HALTLAALVARPTGIPLIVTRRVDFHLRRPGFWRRAARVIAISSAVADVLIDDGIDPV
                     RVQVVHSGIDLDAARQAEPLGLRERLGLPAEATIACTVGALVPHKDHATLLHAARLLV
                     GGFPALHWVIAGDGELRPVLEWLAGELGLAGRVHFLGHVSHPLGVIADADVYVMSSRE
                     EGLGTSVLDAMARGIPVASTSAGGLPEMLHAGGGILVPPRNPEALAAAVRRILCDPDL
                     RRRLVEQASRTVESFSAERMAAEVLTVYRSCAPLLDGS"
     gene            1116..1907
                     /locus_tag="VF061_04570"
     CDS             1116..1907
                     /locus_tag="VF061_04570"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX6668804.1"
                     /translation="MIYVCIPSYNEAATVGLLLWKIRQVFAGFPREYQMLVLDDGSTD
                     ATADILEPYSRVLPLTVVRHQGRRGYAASVQTLFRTALDLTDRPKRDAAILMHADFTH
                     NPQVIPDLVRRIESGADLVVAEGKLEGEASRSLRVLRRFAPQLLRGVVALPGVHDLVS
                     GFAILRLIALRNAMRSHRDGFLLTEGWAANAELYWRTGRYARRVEAVPSVERHDLRQR
                     PSRVRPTEEALNLWRARSRFRASPIAPPPEAVARDTERSAAAVSS"
     gene            1904..2662
                     /locus_tag="VF061_04575"
     CDS             1904..2662
                     /locus_tag="VF061_04575"
                     /inference="COORDINATES: protein motif:HMM:NF022750.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HEX6668805.1"
                     /translation="MIRSLILLAGVLQGSPPPERTSPPDYPFEVGETLTYSAKLGMLT
                     LGSGTLQVAGLDSVRGVETFRLRFRLQGKTVFYSLDDVLESYVATDGFESHRFVQDFV
                     ENNKPKHRTFDIFPDSGFYRESGRDTTFASPDDPLDDAAFFYFIRITPLEVGKKYVFD
                     RYFRKDKNPVTIEVVKRERMELPDGSKVQCLVLHPVIDTKGLFSKRSDTRIWLTDDER
                     RLPVQIRTKFPFGTITLRLKDMVVPGSGTPASGT"
     gene            2665..3627
                     /locus_tag="VF061_04580"
     CDS             2665..3627
                     /locus_tag="VF061_04580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668806.1"
                     /translation="MAYHEADLGRVRTIPVATRRNKVESSLLAAPPGGDRSFNAFFAS
                     LPDVLAARDLRAVVAGVARAARERRGVVLLLGGHVIKVGLGPLIGAWLRRGIVTHLAL
                     NGAAAIHDFELAAFGGTSEDVESGLGDGTFGMAEETGSEMNAAIAAAAKTGDGMGEGL
                     ARALKRRAELPGGECSVMLAALEADVPVTVHAAIGAEIIHQHPTADGAALGQTSHLDF
                     RRLAGSLPMVDQGGAVLNLGSAVLLPEVFLKALTVARNLHAGVPTHFLAADFDMQRHY
                     RPRVNVVQRPTRAGGEGYLLTGHHELMIPLLVWAVLQELETAGG"
     gene            complement(3634..3840)
                     /locus_tag="VF061_04585"
     CDS             complement(3634..3840)
                     /locus_tag="VF061_04585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668807.1"
                     /translation="MLRNLIGYAVFAVIAIVLLKVFFGLFGFVLGLLGTVVWLAFVGF
                     LIYLVLKVFAPDTAARVRELVAGH"
     gene            3913..5019
                     /gene="thiO"
                     /locus_tag="VF061_04590"
     CDS             3913..5019
                     /gene="thiO"
                     /locus_tag="VF061_04590"
                     /EC_number="1.4.3.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR02352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016647 - oxidoreductase activity, acting
                     on the CH-NH group of donors, oxygen as acceptor [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine oxidase ThiO"
                     /protein_id="HEX6668808.1"
                     /translation="MTASYDVIVVGGGPVGAACARELALSGRRVLVLDPEGESGQGWK
                     AAAGMLAPQIEAHQEDPLLELGLAAREHYESLAGALRATTDIDIGLWRQGIAHVAGDE
                     AEAGELRAKVAWQRQQGHLADWLDADEVKSRWPWLGPSAGALWAPHEGAVEPERLVGA
                     LRQDARRLGAVLEQDAATAVESRGERVVGVVGRGGRYAADDVIIAAGAWSSAVAGVPR
                     PIAVAPVRGQMAAFPWPAGARRAIVYGRGGYLVARGNEAIAGSTMEFAGFDAAVTSAG
                     LARVFASATALCPRLTGAEVRRTWAGLRPMTPDGLPIIGAEPRLQGLWYATGHGRNGI
                     LLAGLTGLLMRQLLGGEPPDEDLAPFAPERFWSW"
     gene            5142..5882
                     /locus_tag="VF061_04595"
     CDS             5142..5882
                     /locus_tag="VF061_04595"
                     /inference="COORDINATES: protein motif:HMM:NF025585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4331 family protein"
                     /protein_id="HEX6668809.1"
                     /translation="MHATPTFHRRTIAAGLFVIFGAAGATGLAIGSDHQDTPEVELNP
                     RMDLTDVYAFPGAAAGRIALVLNSRAFLTPGATAADASFDPDLLYQFKIDNDGDARED
                     RVIQVTFSGTGASQRVEVRGPVVPPVRGAMMNEVADVTPALSGSINTPLGSSADLQAF
                     AGPRDDPFFIDLEAAFCILPDRKPVGGALAAPCALTPGPSAPFYFRNPGVNYVQGFNV
                     LSIVVELPSALLENGAPGKLGIWGTISR"
     gene            5910..6503
                     /locus_tag="VF061_04600"
     CDS             5910..6503
                     /locus_tag="VF061_04600"
                     /inference="COORDINATES: protein motif:HMM:NF025585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4331 family protein"
                     /protein_id="HEX6668810.1"
                     /translation="MYLTHIAPLHRRASTLAIALAGLALAGCSDDGDGGTGPVAPRTF
                     NQIQRLGNPLVSEVLLAKRSHPTHGSIGPEDDVALIGPEALGFITGPGSVAGRSAEYA
                     NTLGGALLPDMLIVQTDKDPATAGWLTWLPLAPFANGYGGRKLEDDVVDLALLAVFGD
                     PFGADPAGAAGKEALTTDTVGADSPVLAAFPYLGAPN"
     gene            6500..7810
                     /locus_tag="VF061_04605"
     CDS             6500..7810
                     /locus_tag="VF061_04605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX6668811.1"
                     /translation="MSGATPRRALALAALLMGAAGVALGSAGGAGGAEAPDATGPGEA
                     EVLELDLAFFEARITRDAFAARDHAELARLYLRRARLSATPDADLARAEEHAGRSLEL
                     RTAHNREALQVLASSLMGRHRFAEARDAAERLLAADSASLPSRALLGEIQLELGDYAS
                     AARTFGTLLTVRHDLAVAPRYARWEEIRGRPAEARSLLRAALGEASSRHDMPPSQLAW
                     FRWRLGDLALRNGRLDEAEHELEEGLALAPGDHRLLDGLARVAAARGRWREAVGLGER
                     AIARVLDPATLGLLSLSYGMLGDSAASAEYERAMATSVRSQPGSLHRAWSLFLLDRGR
                     EAPAVLAGAQEEIRTRRDVYAWDVLAWALYRAGAHREALEASSKALAMGTRDASLHFH
                     AGAIAAAAGERRLARRRLNQALVINPRWHPTQPQEARALLERLR"
     gene            7807..>8093
                     /locus_tag="VF061_04610"
     CDS             7807..>8093
                     /locus_tag="VF061_04610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668812.1"
                     /translation="MSARMLLAPLLTVLVAAAHPSHTSTAELVARADSVQVAIRPFTD
                     NLAGTGDLRSYVAERFAIVDGRGAPVALEWIGSRRVRDVVVVRLRGRTPAGL"
BASE COUNT         1100 a         2917 c         2901 g         1175 t
ORIGIN      
        1 cagcgggagc cgaccggtcg aggcgatccc ggagacgtga ggtcggccgt cgtccacgtc
       61 gcgtccggcc gcgagtggcg gggcgggcag cggcaggtcc tgctcctcgc tcgcgagctg
      121 gcgcgggccg gcctccagga ccaggtcgtc gtcaccggag ccgccaccga gctcgggttc
      181 cggctcaagg gcgaaggcgt ccgggtgcgc gagacccggt ggcagtcggg cctcgatccg
      241 cgagtgctcc ttcccctcct gcgggaggtg cgggccgggg ccgcgctgct ccacgcgcac
      301 gatgcgcacg cgctgaccct cgccgcgctg gtcgcccggc ccaccggtat tcccctcatc
      361 gtcacccggc gggtggattt ccacctgcgc cgacccggct tctggcggcg cgcggcgcga
      421 gtcatcgcca tctcctccgc ggtggccgac gtgttgatcg acgacggcat cgatcccgtg
      481 cgcgtccagg tggtccattc cggcatcgac ctggacgccg cgcggcaggc ggaacccctc
      541 ggcctgcggg agcgcctcgg gcttccggcg gaggcgacta ttgcctgcac cgtgggcgcg
      601 ctggtccccc acaaggatca cgcgaccctg ctccacgccg cgcgactgct ggtcgggggc
      661 ttccccgccc tccactgggt gatcgccggc gacggggagc tgcgcccggt cctggaatgg
      721 ctggcgggcg agctggggct ggccggacgg gtgcactttc tgggacatgt gtcccacccg
      781 ctcggagtga tcgcggatgc ggacgtctac gtcatgagca gccgggagga ggggctcggg
      841 acatcggtcc tggacgccat ggcgcgtggc attccggttg catccacgtc cgccggcggg
      901 ctccccgaga tgttgcacgc ggggggtggc attctggtgc ctccccggaa tccggaggca
      961 ctggccgcgg cggtccgccg gatcctgtgc gatcccgact tgcggcggcg gctggtggag
     1021 caggcctcac gcacggtcga gtccttcagc gcggagcgca tggcagccga ggtcctaacg
     1081 gtgtatcgtt cgtgcgcccc actacttgac ggatcatgat ttacgtctgc ataccgagtt
     1141 acaacgaggc cgccaccgtc ggcctgctgc tctggaagat tcgccaggtg ttcgcggggt
     1201 tcccccgcga gtatcagatg ctcgtcctgg acgatggctc caccgatgcg accgcggaca
     1261 ttctggagcc ctactcccgg gtgctgccgc tcaccgtggt gcggcaccaa gggcgccgag
     1321 gctacgccgc ctcggtccag acgctgtttc gtaccgcgct cgacctcacc gaccggccca
     1381 agcgcgacgc ggcgatcctg atgcacgccg acttcaccca caatccacag gtgatccccg
     1441 acctcgtgcg ccgcatcgag agcggcgccg atctggtggt cgccgagggg aagctggagg
     1501 gggaggcgtc ccggtcactc cgcgtgttgc gccggttcgc ccctcagctc ctccgcggcg
     1561 tggtggcgct gcccggggtg cacgacctgg tctccggctt cgccatcctg cgtctcatcg
     1621 cgctgcggaa cgcgatgcgg agccatcgcg atgggttcct gctgaccgag gggtgggccg
     1681 cgaacgccga gctctactgg cgcaccggcc gctacgcgcg gcgggtcgag gcggtccctt
     1741 cggtcgagcg ccatgacctg cgccagcgtc cgagccgcgt ccggcccacg gaggaagcgc
     1801 tgaatctctg gcgggcacgc tcccgcttcc gcgcctcgcc gatcgcgccg ccgcccgagg
     1861 cggtcgcccg tgacaccgag cgctccgccg cggcggtctc gtcgtgatcc gctccctgat
     1921 cctgctggcc ggggtactcc agggcagccc gccaccggag cggacctcac cgcccgacta
     1981 ccccttcgag gtcggcgaga ccctgacgta cagcgccaag ctcggcatgc tgacgctggg
     2041 ctccggcacg ctccaggtcg ccggcctcga ctcggtacgc ggggtggaga ccttccggct
     2101 ccgattccgt ctccagggaa agacggtctt ctactccctg gacgacgtgc tcgaatccta
     2161 tgtggcgacc gacggcttcg agtcgcaccg gttcgtccag gacttcgtgg agaacaacaa
     2221 gccgaagcac cggaccttcg acatttttcc cgactccggg ttctaccgcg agagcggccg
     2281 cgacaccacc ttcgccagcc ccgacgatcc gctggacgac gcggcgttct tctacttcat
     2341 ccggatcact ccgctcgagg tcggcaagaa gtacgtgttc gaccgctact tcaggaagga
     2401 caagaacccc gtcaccatcg aggtggtgaa gcgcgagcgc atggagctgc ccgacggcag
     2461 caaggtgcag tgtctcgtgc tccacccggt gatcgacacc aagggcctgt tctccaagcg
     2521 gtccgacacc cggatctggc tcaccgacga cgagcgcagg ctgccggtgc agatccggac
     2581 caagttcccc ttcggcacca tcaccctgcg attgaaggac atggtggtgc ccgggagcgg
     2641 taccccggcc tccggcacct gagcgtggcc taccacgagg ccgatctcgg ccgggtgcgg
     2701 acgatcccag tcgccaccag gcgcaacaag gtcgagtcct ctctcctcgc cgccccaccc
     2761 ggcggcgacc gctccttcaa cgccttcttc gccagcctcc ccgatgtcct cgcggcccgc
     2821 gacctgcggg ccgtcgtcgc cggcgtggcc cgcgccgcgc gggagcgtcg cggcgtcgtg
     2881 ctcctgctcg gcgggcacgt gatcaaggtg gggctcggcc cgctgatcgg cgcctggctg
     2941 cggcgaggca tcgtcacgca cctcgcgctc aacggggcgg ccgcgatcca cgacttcgag
     3001 ctcgccgcgt tcggcggcac gagcgaggac gtcgagagcg gtctgggcga cgggaccttc
     3061 ggcatggcgg aggaaaccgg gtccgagatg aacgccgcca tcgcggccgc ggcgaagacg
     3121 ggcgacggga tgggcgaggg actcgcccgg gcgctgaagc gcagggcgga gttgccgggg
     3181 ggcgagtgct ccgtgatgct ggccgcgctc gaggccgacg tcccggtcac ggtgcacgcc
     3241 gcgatcggcg cggagatcat ccaccagcac ccgactgcgg acggcgcggc gctggggcag
     3301 acgagccacc tggacttccg gcgcctcgcg ggctcactgc cgatggtcga tcagggcggg
     3361 gcggtgctga atctcgggag cgcggtgctg ctgccggagg tgttcctgaa ggcgctgacg
     3421 gtcgcccgca accttcatgc gggggtcccg acccacttcc tcgccgccga cttcgacatg
     3481 cagcgccact accggccgcg cgtcaacgtg gtccagcgtc ctacccgagc cggcggcgag
     3541 ggctatctgc tcacgggcca ccatgagctc atgatccccc tcctggtgtg ggcggttctc
     3601 caggagctcg agacggcggg agggtagccg cggtcagtga cccgcgacca gctcccgcac
     3661 ccgggccgcc gtgtccggcg cgaacacctt cagcaccagg tagatcagga atcccacgaa
     3721 ggccagccac accaccgtgc cgagcaggcc gagcacgaag ccgaagagac cgaagaacac
     3781 cttgagcagg acgatggcga tcaccgcgaa gaccgcgtat ccgatgagat tcctgagcat
     3841 gtaccttcct cctggcagcg ggacagcgcc tagtacgccc ctacgtttca aatagtttca
     3901 tagggaaggt aagtgacggc ttcctacgac gttatcgtgg tgggtggcgg ccccgtcggg
     3961 gccgcctgcg cccgagagct cgccctctcc gggcgccggg tgctcgtgct cgacccggag
     4021 ggcgagagcg gccagggctg gaaggcggct gcgggaatgc tcgcgcctca gatcgaggcg
     4081 caccaggagg acccgctgct ggagctgggg ctggcggcgc gcgaacacta cgagtccctc
     4141 gcgggggcgc tccgggccac gactgatatc gacatcgggc tgtggcgcca ggggatcgcg
     4201 cacgtggccg gcgacgaggc cgaggcgggc gagctgcgag cgaaggtggc atggcagcgt
     4261 cagcagggac acctggccga ctggctcgac gccgacgagg tgaagagccg ctggccctgg
     4321 ctgggaccgt cggcgggcgc gctctgggcg ccgcacgagg gcgccgtgga gcccgagcgg
     4381 ttggtcggcg ccctgcgcca ggacgcgcgc cgcctcggcg cggtgctgga gcaggatgcg
     4441 gcgaccgcgg tcgagtcgcg gggggaacgg gtcgtcggtg tcgtcgggcg gggaggccgc
     4501 tatgccgccg acgacgtgat catcgccgcg ggcgcctggt cgtcggcggt ggccggcgtt
     4561 ccacggccga tcgcggtcgc cccggtgcgc ggtcagatgg cggcctttcc ctggccggcg
     4621 ggtgcgaggc gggcgatcgt gtacggtcgc ggaggctacc tcgtggcgcg gggcaacgag
     4681 gcgatcgccg gctccacgat ggagttcgcg ggcttcgatg ccgcggtcac ctccgccggc
     4741 ctggcgcggg tattcgcctc cgccaccgcg ctctgtccca ggctgaccgg ggccgaggtg
     4801 cgtcgcacct gggccggact ccgaccgatg actccggacg ggctgcccat catcggcgcc
     4861 gagccgcgac tccaggggct gtggtacgcg accggccacg gccgcaacgg catcctcctc
     4921 gcgggcctca ccgggctgct catgcgccag ctgctcggtg gcgaaccgcc ggacgaggat
     4981 ctggcgccct tcgcaccgga gcgattctgg agctggtaga acacagctag aggccgcgcg
     5041 tcagcagcat ccctcataca tccgttttcc gggctccggc gtaagccagt cacgacgcgg
     5101 catgcgtcgt ctcgccacca ccgcccagga gaaggatggc catgcacgcc acccccacat
     5161 tccaccggcg cacgatcgcc gccgggctct tcgtcatctt cggcgccgcg ggcgccaccg
     5221 ggctcgccat cggatcggat caccaggaca cgcccgaggt cgagctcaat ccccggatgg
     5281 acctgaccga cgtctacgca tttcccggcg cggcggctgg tcgcatcgcc ctcgtgctca
     5341 acagccgggc ctttctcacg cccggcgcca ccgccgcgga cgcctcgttc gaccccgacc
     5401 tgctctacca gttcaagatc gacaacgacg gggacgcccg cgaggaccgg gtgatccagg
     5461 tgacgttcag cggcaccggc gcctcccagc gggtcgaggt ccgcgggccg gtcgtgccgc
     5521 cggtgcgggg agcgatgatg aacgaggtcg cggacgtgac tcccgccctg agcggctcca
     5581 tcaacacccc gctcggctcg tcggcggacc tccaggcgtt cgcgggcccg cgcgacgatc
     5641 ccttcttcat cgatctcgag gccgccttct gcatactccc cgatcgcaag ccggtcggcg
     5701 gcgcgctggc cgcgccctgc gccctcaccc ccggtccgag cgcgccgttc tacttccgca
     5761 accccggggt caactacgtc cagggcttca acgtgctgtc catcgtggtc gagctgccga
     5821 gcgcgctgct cgagaacggt gcgccgggca agctgggcat ctggggcacg atcagccgct
     5881 gacgcggcgt cactcgagga gacaccgaca tgtatctcac ccacatcgcc cccctgcacc
     5941 gccgggcaag caccctggcg atcgccctcg ccggtctcgc gctcgcgggc tgtagcgacg
     6001 acggcgacgg gggcaccggg cccgtggcac cccgcacctt caaccagatc cagcggctgg
     6061 gcaatccgct ggtcagcgag gtcctgctgg ccaagcgcag ccacccgacg cacggctcga
     6121 tcggacccga ggacgacgtc gccctgatcg ggccggaggc actggggttc atcaccgggc
     6181 ccggcagcgt ggccggccgg tccgccgagt acgcgaacac gctgggcggc gccctcctgc
     6241 ccgacatgct gatcgtgcag accgacaagg atccggccac cgcgggatgg ctcacctggc
     6301 ttccgctcgc gccgttcgcc aacggctacg ggggccgcaa gctcgaggac gacgtggtgg
     6361 acctcgcgct gctggcggtc ttcggcgatc cgttcggcgc cgatcccgcg ggcgccgccg
     6421 ggaaggaggc gctcaccacc gacaccgtcg gcgcagactc gccggttctc gcggctttcc
     6481 cttatctcgg ggcgccgaat tgagcggggc gacgccacgc cgcgcgctcg cgctggcagc
     6541 gctgctcatg ggcgcggcgg gcgtcgcgct cggctcggcc ggtggggcgg gcggagcgga
     6601 ggcgccggac gccaccgggc ccggggaggc cgaggtactc gagctggacc ttgccttctt
     6661 cgaggcccgg atcacccgcg acgcgttcgc cgcgcgcgac catgccgagc tcgcgcggct
     6721 ctacctccgg cgcgcccggc tgagcgccac accggacgcg gacctggctc gagcggagga
     6781 gcacgctgga cggtcgctcg agctgcgcac ggcgcacaat cgggaggcgc tccaggtcct
     6841 ggcctcgagc ctcatggggc ggcaccggtt cgcggaggct cgggacgcgg cggagcgtct
     6901 gctggcggcg gactccgcgt cactgccgtc gcgggcgctc ctgggcgaga tccagctcga
     6961 gctcggcgac tacgcgtcgg cggcccgcac gttcggcacg ctgctcacgg ttcgccacga
     7021 tctggcggtc gctccgcgtt acgcgcggtg ggaggagatc cgcgggcggc cggccgaggc
     7081 ccggtcactg cttcgcgccg ccctgggcga ggccagctca cggcacgaca tgccgccttc
     7141 ccagctcgcc tggttccgct ggcgactcgg cgatctcgca ctgcgcaacg gccgcctgga
     7201 cgaggccgag cacgagctgg aggagggact cgccctggca ccgggggacc accgcctgct
     7261 cgacggcctg gcccgcgtgg cggccgcacg gggccgctgg cgggaggccg tcgggctcgg
     7321 cgagcgcgcg atcgccaggg tgctcgaccc cgccacgctc ggcctcctgt cgctgagtta
     7381 cggcatgctg ggcgacagcg cggcgagcgc ggagtacgaa cgcgcgatgg cgacatccgt
     7441 tcggagccag ccagggagcc tgcaccgggc ctggagcctc ttcctcctgg accgcggccg
     7501 ggaggcgccg gcggtgctcg ccggcgcgca ggaggagatc cggacccgac gggacgtcta
     7561 cgcgtgggac gtgctggcgt gggcgctgta ccgtgcggga gcccaccggg aggccctgga
     7621 agccagctcg aaggcgctgg cgatgggcac ccgggacgcg tcgctgcact tccatgcggg
     7681 agccatcgcg gctgcggccg gtgagcgtcg gctcgcccgg cgcaggctga accaggcgct
     7741 ggtgatcaat ccgcggtggc acccgactca gccgcaggag gcgcgcgcgc tgctggagcg
     7801 actccggtga gcgcgaggat gctgctggct ccgctgctga cggtgctcgt ggccgccgcg
     7861 catccaagcc acacctccac cgcggagctg gtcgcgcggg cggactcggt gcaggtcgcc
     7921 atccgcccct tcaccgacaa tctggcgggt accggcgacc tgcggtccta cgtcgccgaa
     7981 cggttcgcga tcgtggatgg ccggggcgcg ccggtcgcgc tggaatggat cgggtcgcgc
     8041 agggtgcggg acgtcgtcgt cgtccgtctc cgcggccgga cgccggccgg act
//
LOCUS       DASUYN010000231         2198 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_74991, whole genome shotgun sequence.
ACCESSION   DASUYN010000231 DASUYN010000000
VERSION     DASUYN010000231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2198)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2198)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2198
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74991"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..677
                     /locus_tag="VF061_04615"
     CDS             <1..677
                     /locus_tag="VF061_04615"
                     /inference="COORDINATES: protein motif:HMM:NF044955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668813.1"
                     /translation="EGDTVPMSEMRDRIPKHSDTWRGRWESMTSALNDVDQGQLAWDR
                     NLNGPKWLLILGLAVAFAVVVVCDIAVDEEWFLPSLIGVLTLITLAVYPWNRLKRLHP
                     EYRERSARWRAFERWTRDFPTLEDDPPVTLDLWKRILVFGVAFGTAERMIESGRIPEP
                     VLEDSSGWSTYYFTGGVTHSAFDGGDFGGGFASQVAPESSSGGGGGGFSGGGGGASGG
                     GGGGGW"
     gene            862..>2198
                     /locus_tag="VF061_04620"
     CDS             862..>2198
                     /locus_tag="VF061_04620"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase"
                     /protein_id="HEX6668814.1"
                     /translation="MASHSGPPHVILITTDDQTVRDMIALPKTQALVGAAGATFRNAY
                     ASYPLCCPARATLLTGQHAHNHGVLGNLPPEGGYSALRDGETVPVWLQSRNYRSIHIG
                     KMPNGFGATDQTNVPPGWKPFPGDGEFYGFLPDPPSAYTGFKLNENGVPVTYGELDYQ
                     TDTYGQIAVQRIGAHFSVFPNRPLYMQVHFFAPHDPATPAPRHVGAFATAQLPVDKAF
                     NEKNIRDKPSWLRAVKRMGPGLRGKVLTRYRTRLESLLSVDDAVEGIVSELEAQGELD
                     ETYLVFTSDNGYMQGQQRLHQGKFVAYDPSSKVPLLIRGPGIPAGASTKELVSNVDIV
                     PTILDAAGAQAGIAQDGRSMLPFARKPALRSMRPVLLETGQPIGISDPASASGSPPKA
                     KSAIRAKNLDMDGTAQLAKVVKPPKYRAIRTGRYLLVKYSDGGRELYEMSTDRL"
BASE COUNT          341 a          774 c          778 g          305 t
ORIGIN      
        1 tcgagggcga cacggtcccg atgagcgaga tgcgcgaccg catcccgaag cacagcgaca
       61 cctggcgcgg ccgctgggag tccatgacga gcgcgctcaa cgacgtggac caggggcagc
      121 tcgcctggga ccggaacctg aacgggccca agtggctgct gatcctgggg ctcgctgtcg
      181 cgttcgcggt cgttgtcgtc tgcgacatcg ccgtggacga ggagtggttc ctgccgagcc
      241 tgatcggcgt gctgacgctg atcacgctcg cggtctaccc gtggaacagg ctgaagcggc
      301 tgcacccgga gtaccgggag cggagcgcgc ggtggagggc gttcgagcgg tggacccgcg
      361 acttcccgac cctcgaggac gaccccccgg tgaccctgga cctgtggaag cgcatcctgg
      421 tcttcggggt cgcgttcggc acggccgagc gcatgatcga gtccggccgg atccccgagc
      481 cggtgctgga ggacagctcc gggtggagca cctactactt cacgggcggg gtcacccaca
      541 gcgccttcga cggcggcgac ttcggcggtg ggttcgcctc gcaggtcgcg cccgagtcct
      601 ccagcggcgg gggcggcggg ggcttctcgg gcggcggggg cggcgcctcc ggcggagggg
      661 gcggcggggg ctggtagccc cccacggggg gcagccggcg cccctgacac agcgaaactc
      721 aggcgccggg tcttagttag attcgaagac ttcgtgatgc ggggctggac gcgcacaacc
      781 cggcgcagag ccggcgcggc gaccgccgcg ctggcggccg catgcgcgct cgctctggcg
      841 ccgggcgccg agcagccctc cgtggcctca cacagcggcc ctccccacgt gatcctgatc
      901 acgacggacg accagaccgt gcgcgacatg atcgccctgc ccaagacgca ggccctggtg
      961 ggcgccgcgg gagcgacgtt ccgcaacgca tacgcctcct atcccctctg ctgcccggcc
     1021 cgggccaccc tgctgaccgg gcagcacgct cacaaccacg gagtcctggg gaacctgccg
     1081 cccgagggcg gctactcggc gctgcgcgac ggcgagaccg tcccggtctg gctccagtcc
     1141 cgcaactacc gctcgatcca catcggcaag atgccgaacg ggttcggggc gacggaccag
     1201 accaacgttc cccccggttg gaagccgttc cccggcgacg gggagttcta cgggttcctg
     1261 cccgacccgc cgtcggccta caccggcttc aagctgaatg agaacggggt gccggtcacc
     1321 tacggcgagc tggattacca gaccgacacc tacgggcaga tcgcggtgca gcgcatcggc
     1381 gcgcacttct cggtcttccc gaatcgtccg ctttacatgc aggtgcactt cttcgcgccg
     1441 cacgacccgg ccacccccgc gccgcgccac gtgggtgcct tcgcgacggc gcagctgccg
     1501 gttgacaagg ccttcaacga gaagaacatc cgggacaagc cttcctggct ccgcgccgtg
     1561 aagcggatgg gcccgggcct gcggggcaag gtcctgaccc gctaccgcac ccgactggag
     1621 tcgctgctga gcgtcgacga cgcggtcgag gggatcgtga gcgagctgga ggcgcagggt
     1681 gagctggacg agacgtacct ggtgttcacc tcggacaacg gctacatgca gggccagcag
     1741 cgcctgcacc agggcaagtt cgtggcctat gacccctcgt ccaaggtgcc gctgctgatc
     1801 cgggggccgg gcatcccggc cggcgcctcc accaaggagc tggtctcgaa cgtggacatc
     1861 gtcccgacga tcctggacgc cgccggggcc caggcgggca tcgcccagga cggccgctcg
     1921 atgctgccgt tcgcacgcaa gccggcgctg cggtcgatgc ggccggtgct gctcgaaacc
     1981 ggccagccca tcgggatctc cgatcccgcc agcgcctcgg gcagcccgcc gaaggcgaag
     2041 tccgcgatcc gcgccaagaa cctggacatg gacggcaccg cccaactggc gaaggtggtg
     2101 aagccgccca agtaccgggc gatccgcacc gggcgctacc tgctggtgaa gtactcggac
     2161 gggggccgcg agctgtatga gatgtcgacg gaccggct
//
LOCUS       DASUYN010000232         3032 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1397934, whole genome shotgun sequence.
ACCESSION   DASUYN010000232 DASUYN010000000
VERSION     DASUYN010000232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3032)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3032)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3032
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1397934"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1961)
                     /locus_tag="VF061_04625"
     CDS             complement(<1..1961)
                     /locus_tag="VF061_04625"
                     /inference="COORDINATES: protein motif:HMM:TIGR00733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0035673 - oligopeptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006857 - oligopeptide transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide transporter, OPT family"
                     /protein_id="HEX6668815.1"
                     /translation="MATASVARPKPDAQGFKPFVPPTQSPAELTVRAVVLGAILGIVF
                     AASSVYLALKIGLTVSASIPIAVLAVAFFRTLGKSTILENNMVQTTGSAGESIAAGIV
                     FTLPAILLLGYDLTVGKVAVVAVVGGILGVLLMIPLRRALIVKEHGNLPYPEGTACAE
                     VLIAGEKGGLQARRLFQAFGIAFAYKFLMAGFRGWKEYPGWTSRTYQGASISAEVSPE
                     LMGVGYIIGPRIAGYLFAGGFLAYMVLIPAIKLFGSGLTEPIFFEPKLIGEMSPSEVR
                     SYFVFYIGAGAVATAGIIALVRALPTIVSAFRSGFEDLKGSVGATVSRVRTDVDLPIW
                     VTPVGAVLLALILTTLPQLAVNLLGAVLIVIFGFFFVVVSSRITGEIGVSANPVSGMT
                     IAALIGTATIFLLIGWTGVDHRVGAITIAGVIAVAAANAGATSQDLKTGFYVGATPRR
                     QQLGILVGAVTSALAIGWTLALLNNTYTTIVPERHPGVTLEAAAPGADDRSVTTLGET
                     LRHEGQDWEVVRVNLPTGGVQPGKYLVDPATKEVAYLVDPGIGGRIRELDGRPITKLD
                     SPKATIMALVPDGILTRKLPWGLVLIGVCLTIAIELMGLQSLPIAVGVYLPISTSSAM
                     FAGGVVRWLVERRARSAERSIAEVESGPGV"
     gene            2162..2311
                     /locus_tag="VF061_04630"
     CDS             2162..2311
                     /locus_tag="VF061_04630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lmo0937 family membrane protein"
                     /protein_id="HEX6668816.1"
                     /translation="MLWTIFVILLVLWLLGMVSSYTLGGFIHILLVIALAIIIIRVIQ
                     GRRPV"
     gene            2308..2529
                     /locus_tag="VF061_04635"
     CDS             2308..2529
                     /locus_tag="VF061_04635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668817.1"
                     /translation="MKPGTIIGIILIVLGVVGFALGGFSFTQKEKVLDLGPIEATAED
                     KETVPIPPILAGLALVGGVVLVAASARRT"
     gene            complement(2606..>3032)
                     /locus_tag="VF061_04640"
     CDS             complement(2606..>3032)
                     /locus_tag="VF061_04640"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:NF014200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004185 - serine-type carboxypeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase"
                     /protein_id="HEX6668818.1"
                     /translation="YEDRVAPSAFIAYLAKFPGTAAGQNFPQLLPANGTGTLRRLNTG
                     FPGEGVVRAKTGTLQQVSTVVGYLGTSEGVLLVSLMYNGTRPWAARQAQWKLFRELGA
                     DGVVIPTDSVPAPPVQMGGDADSTGAASAGAAAGIVVTD"
BASE COUNT          491 a         1034 c         1062 g          445 t
ORIGIN      
        1 acgcccggcc ccgactcgac ctccgcgatc gaccgctccg cgctccgtgc ccgccgctcc
       61 accagccacc ggaccacccc gcccgcgaac atcgccgacg aggtcgagat cggcaggtac
      121 acgccgacgg cgatcggcag cgactggagc cccatcagct cgatcgcgat cgtgaggcag
      181 acgccgatca gcaccagtcc ccagggcagc ttccgggtca ggataccgtc ggggaccagc
      241 gccatgatgg tggccttggg cgagtcgagc ttggtgatcg gccggccgtc cagctcgcgg
      301 atacgcccgc cgatgcccgg atccaccagg tatgcgacct ccttggtcgc cggatccacg
      361 aggtatttgc ccggctgcac gccgccggtc ggcaggttga cccgcaccac ctcccagtcc
      421 tggccctcgt gtcgcagcgt ctcgcccagc gtcgtgaccg agcggtcgtc cgcgccgggc
      481 gcggccgcct ccagggtcac accgggatgc cgctcgggga cgatggtggt gtaggtgttg
      541 ttgaggaggg cgagggtcca gccgatggcg agcgcggacg tgaccgcgcc cacgagaatg
      601 ccgagctgct ggcgccgcgg cgtggcgccg acgtagaagc cggtcttgag gtcctggctg
      661 gtggctcccg cattggccgc cgctaccgcg atcacgccgg cgatggtgat ggctcccacc
      721 cggtggtcca cgccggtcca cccgatcagg aggaagatcg tcgcggtgcc gatcagtgcg
      781 gcgatcgtca tgcccgagac cggattggcg ctgaccccga tctcgccggt gatgcgggac
      841 gagaccacca cgaagaagaa cccgaagatg acgatcagca ccgcgccgag cagattcacc
      901 gccagctgcg gcagcgtggt gaggatcagg gccagcagca ccgcgccgac cggcgtcacc
      961 cagatcggga ggtccacgtc ggtgcggacc cgggacacgg tcgcgccgac gctgcccttg
     1021 aggtcctcga agccggagcg gaacgcggag acgatggtgg ggagcgcccg gaccagcgcg
     1081 atgatccccg ccgtcgctac cgcacccgca ccgatgtaga agacgaagta cgaccggacc
     1141 tcgctcgggc tcatctcccc gatgagcttg ggctcgaaga agatcggctc ggtcagcccg
     1201 gagccgaaga gcttgatggc ggggatgagc accatgtagg cgagaaagcc gccggcgaac
     1261 aggtagcccg cgatccgcgg gccgatgatg tagccgacgc ccatcagctc gggcgagacc
     1321 tccgcggaga tcgaggcgcc ctggtaggtc cgcgacgtcc agccggggta ttccttccat
     1381 cccctgaacc ccgccatcag gaacttgtag gcgaaggcga tgccgaacgc ctggaacagc
     1441 cgccgcgcct ggagcccgcc tttctccccc gcgatcagca cctcggcgca ggcggtgccc
     1501 tcggggtagg gaaggttgcc gtgctccttc acgatgagcg cccgccgcag cgggatcatg
     1561 agcagtacac cgaggatacc gccgaccacc gcgacgaccg ccaccttgcc gaccgtgagg
     1621 tcgtagccca ggagcaggat cgcgggcagg gtgaagacga tgcccgccgc gatggattcg
     1681 ccggcggacc cggtcgtctg caccatgttg ttctccagga tggtggactt ccccagcgtc
     1741 ctgaagaacg cgaccgcgag cacggcgatc ggaatggagg ccgagaccgt gaggccgatc
     1801 ttgagtgcca ggtacacgct cgaggcggcg aagacgatgc cgagaatcgc ccccagcacc
     1861 accgcgcgga ccgtcagctc ggccggcgac tgggtcgggg ggacgaaagg cttgaagccc
     1921 tgggcgtcgg gcttggggcg ggctacggat gcggtcgcca tgcgttccgg tgggtggatg
     1981 gtgtcaggat agtacggccg atgccccggc gccggaaggc ggcgcctggg ggacgtcacc
     2041 cgccgggccg gacccccatt ccgcaccgtg ggtgagggtc gtcacggcaa tcaagctcgg
     2101 cttcccctag gatatccgca tcccgcacga ccgccgtgga ttcacactct gggaggccgg
     2161 tatgctctgg acgatcttcg tgatcctgct ggtgctgtgg ctgctcggaa tggtgtcgtc
     2221 gtacactctg ggtggcttca tccacatcct gctggtgatc gccctggcga tcatcatcat
     2281 ccgcgtcatt cagggccggc gccccgtatg aagcccggca cgatcatcgg gatcatcctg
     2341 atcgtgctcg gcgtggtggg gttcgccctg ggcgggttct ccttcaccca gaaggagaag
     2401 gtgctggacc tcgggccgat cgaggccacc gcggaggaca aggagaccgt gccgatcccg
     2461 ccgattctgg ccggtctcgc gctcgtgggc ggcgtggtgc tcgtggccgc cagcgcgcgc
     2521 aggacgtagc gcgcaggagg gtggaacacg acggccgcgg acgggatgtc cgcggccggc
     2581 ttcatctgtg cccttcagca ccggttcagt ccgtcaccac gataccggcc gcggcaccgg
     2641 cgctcgccgc gccggtggaa tccgcgtctc cgcccatctg caccggagga gcgggcacgc
     2701 tgtcggtggg aatgaccacg ccgtcggcgc ccagctcgcg gaacagcttc cactgggcct
     2761 gccgggccgc ccaggggcgg gtcccgttgt acatcaggct gacgagcagc acgccctccg
     2821 aagtgcccag gtaacccacc acggtcgaga cctgctgcag cgtgccggtc ttggcccgca
     2881 ccacgccctc gcccgggaac ccggtattga ggcggcggag agtaccggtg ccgttcgcgg
     2941 gcaggagctg agggaagttc tggccggcgg cggtgccggg aaacttcgct aggtaggcga
     3001 tgaacgcgga cggggccacc cggtcctcgt ac
//
LOCUS       DASUYN010000233         5856 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1839927, whole genome shotgun sequence.
ACCESSION   DASUYN010000233 DASUYN010000000
VERSION     DASUYN010000233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5856)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5856)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5856
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1839927"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            182..1072
                     /locus_tag="VF061_04645"
     CDS             182..1072
                     /locus_tag="VF061_04645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD/SigA"
                     /protein_id="HEX6668819.1"
                     /translation="MTKRKGGRRRSARAAQLPRAVDEGRESLDFYLQEISRIPLLKID
                     EETALARRAFKGDVEAQEKLARHNVRFVVSVAKKFQNRGVPLMDLIGEGNVGLMTAAR
                     KFDPDRGVKFISYAVWWIRQAIQAAIARHGRPVRVPLNRTADLNRLGRTTVLLTERLG
                     RAPTTEELVEATGLTRDAVRALGALHIEALRLDHPVREADDRGRMERFVPLTQEGTDS
                     TTLANSRTTDLETALAALPPRDAKVLRLYFGLDDGKSRTLEEIGRMMGVTRERIRQLR
                     DRALRQLREQHGDKLRELAA"
     gene            1287..1712
                     /locus_tag="VF061_04650"
     CDS             1287..1712
                     /locus_tag="VF061_04650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668820.1"
                     /translation="MSKRLRAGLAEHFELFLTAVGVMVCFGLVFSDLPQDDRGLAQVF
                     LIWLQGFLIWAVHRHATLRRQALIEKMRLMLQDRVNNQLTVMLGMAEIRHRDMTPEER
                     EDLETATVAARTVAHELETLSVQSLRSWERRHGYLLRRT"
     gene            1928..2668
                     /locus_tag="VF061_04655"
     CDS             1928..2668
                     /locus_tag="VF061_04655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668821.1"
                     /translation="MSTPSQMSLRRIPPALHLRVRIAYANGWEALIGTHTSQALQFVC
                     EFASRTPVLRALDLYFEVVAVPAGMQESVRTRCLTSLELESLPPLAAPPALRGWQVLR
                     VDRFVERQQYRRRFEEKTLQLARMVGARAAEAVIATHVENAIGFYELVRGVLPVEQAT
                     DHYLREFSLPSSTAQMVWQRVQARVAGQELTAQYSDPPPPPLEPEFTESEPEPEPEPE
                     HAALTSAYPESLGELEEEAIRTRSPYPD"
     gene            complement(2640..3845)
                     /locus_tag="VF061_04660"
     CDS             complement(2640..3845)
                     /locus_tag="VF061_04660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668822.1"
                     /translation="MPKGYRALRSASTRVPALRLAAMLAALAAVAAAPAPAQEPDIEA
                     SVHGLILMNAFHTTDNVNNSDVPQFAVPPGATAPEGSSSSATVRQSRVTAFALVPEFA
                     GGVLEGELDVDFFGGQQPSTGGRTFPLLRVRRAVAELTWNRVALLVGQESPPIAAVSP
                     SSIASVGFPDFAGAGNLWLWIPQIRLSADLPASGAVRVGVEIAALAPTSGDPQGAFAT
                     QPDIAERSGRPFLQGRVRGRWGQGEQLGEVSAGGHYGWILDAAGARVPSKALAVSVWT
                     PLGSRLDFRAEAFTGQAVGGLGGGGIGQNMVRDGVPVRSIGGWAQLNLRPSVRWEIGG
                     GAGIDDPDDDDLGDASRLRNLAVEGHVTWRRLPAVLGVEVRHLRTRYREPVGDLTATQ
                     VNLGMGFEF"
     gene            3844..4539
                     /locus_tag="VF061_04665"
     CDS             3844..4539
                     /locus_tag="VF061_04665"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HEX6668823.1"
                     /translation="MRGKIQPGPAVRRVLALGGLAVGSLAWAAQPAEVTGRVTMLEKD
                     DQRGDDVGQAVVWLTGPPASPRSPIETDLGTSDKEFSPHVLVVPVGSTVSFSNHDPFN
                     HNVFSLSEENPFDLGLYGRGEARSVRFERPGVVRVYCNVHAQMSALVLVRDTPWYTQP
                     ASDGSFSLGAVPPGRYTLHAWHERAPEVARPLEVTAEGGEPLSIELDARGFQFKPHLN
                     KHGQPYPQQGRRY"
     gene            4562..>5856
                     /locus_tag="VF061_04670"
     CDS             4562..>5856
                     /locus_tag="VF061_04670"
                     /inference="COORDINATES: protein motif:HMM:NF012876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HEX6668824.1"
                     /translation="MKLPLGRRIFLGTTLVVVAVLGSALLVTQQRAGAAADEASARAL
                     GATASSIEEALASRSETLLRLTQALVQVPAYVSRIGEALRASDRANLLDQADELRVQT
                     GADWVLITDRAGVLQAWTERRGIFGEDFSRGALIGRAMEGQITQGLWLEPTEDGDALY
                     QAVGVPVANAGSATPFGVVVAALQVDSAFAAQLRRNTDSEIAFFSLDTLGVPQVAVSS
                     LPRETVVGELRRAAMATEEDTTFARFTVTANGERYVAAAGLLRSADGVPLGGFVGLHS
                     RDQELAAYRQLSRTIGWSFVVGLLLALAFSVLMARRITLPVRELVRATREVSEGQYTG
                     RIVGTTDDEIGELASAFGHMVEELKEKERLVDYLRTGGQRGDGSATLPPILPGARPEG
                     GTLAVGQRFAGRYDIQEALGSGGMGVVYRAFDREVGETLA"
BASE COUNT          845 a         2068 c         2089 g          854 t
ORIGIN      
        1 gggacgtcgg ctgttcgaca ggcgtatagc tgtgcgacga ttcctctcgt acggacatct
       61 agcgggaacg gcccccgagc ggcgggggcc aacgacatct tgtaagtgat ttcatgtcaa
      121 cggcttgtcg gcgaccccca aggcgggtcc gacgagtgag aacaggagcg gtgctgtggc
      181 ggtgaccaag cggaaaggcg ggcggcggcg ctcggctcga gcggctcagc ttccgcgggc
      241 cgtcgatgag gggcgggaga gcctggattt ctacctccag gagatcagcc ggatccccct
      301 tctcaagatc gacgaggaga cggccctggc ccggcgtgcg ttcaagggcg acgtggaggc
      361 gcaggagaag ctcgcccggc acaacgtgcg cttcgtcgtc tcggtggcga agaagttcca
      421 gaatcgcggc gttccgctga tggatctcat cggagagggc aacgtcggcc tcatgacggc
      481 ggcgcggaag ttcgatccgg accggggcgt caagttcatc tcctatgcgg tctggtggat
      541 ccggcaggcg atccaggcgg ccattgcgcg tcacggacgt ccggtgcggg tgccgctcaa
      601 ccgtaccgcg gacctgaacc gcctgggccg gaccacggtg ctgctgaccg agcggctggg
      661 ccgggcgccc acgaccgagg agctagtgga ggccaccggt ctcacccgcg acgcggtccg
      721 cgccctgggc gcgctccata tcgaggccct ccggctcgac cacccggtac gcgaggcgga
      781 cgaccgcggc cggatggagc gattcgttcc cctgacccag gaggggacgg attcaaccac
      841 gctggccaac agtcggacga ccgacctgga gaccgcgctg gcggccctgc caccccggga
      901 cgccaaggtc ctccgcctgt atttcggtct ggacgacggc aagagccgga cgctggagga
      961 gatcggccgg atgatgggcg tcactcggga gcggattcgg cagctccgcg accgcgccct
     1021 ccgccagctt cgggagcagc acggcgacaa gctccgcgaa ctcgccgcct gaggtcccga
     1081 ggcgctggag aaaccccgat cggcacccgc cggtcggggt ttttctgcat gctgggcgcc
     1141 cgatgccgac tcttgcagtg acggggggct ggactagagc gtctctttag cgaatacttg
     1201 agcacccccc aaacgcatcc tcttctgtac ggttggccgc gggaagtcca gccgggcgag
     1261 gtacccctgt gaaccgacta tccgcggtga gcaagaggct ccgggcaggt ctggccgagc
     1321 acttcgagct gttcctgacg gctgtgggcg tcatggtctg cttcggactg gtgttctccg
     1381 accttcccca ggatgaccgg ggtctggcgc aagtgttcct catctggctg cagggcttcc
     1441 tgatctgggc ggtccatcgg catgcgacgc tgcgccggca ggcccttatc gagaagatgc
     1501 ggctcatgct tcaggatcgg gtcaacaacc agctcaccgt catgctcggc atggccgaga
     1561 tccgtcaccg ggacatgacc ccggaggagc gtgaggacct ggagactgca accgtggccg
     1621 cgcggaccgt ggcgcacgag ctggagacgc tctccgtgca gtccctccgg tcgtgggagc
     1681 gccgccacgg ctatctcctg cgaagaacct gataccgatg cttgccacgg ctccgggcgt
     1741 tttgcggtga ggtccccgcc gcccggcgcc agccgccggc ggagagcccc cgcgagcccc
     1801 tctccgatcg ctgcccaaac cattagtagt taacgcgttg caatggcggg gcccgccggg
     1861 ctcggcgcgg ttccgccccc accggccaag tccctgccgg gactggatat tgcgcagcgc
     1921 tcctccgatg agcacgccca gccagatgtc tctccgccga atcccgccag cgctccacct
     1981 ccgcgtccgc atcgcgtacg cgaacgggtg ggaggcgctc atcggcacgc acacctccca
     2041 ggccctccag ttcgtctgcg agttcgcctc ccgcaccccg gtgctgcgcg cgctcgacct
     2101 ctacttcgag gtcgtggccg tgccggcggg gatgcaggag tcggtgcgga cccgctgcct
     2161 cacctcgctg gagctggagt ccctgccgcc cctcgcggcg cctcccgccc tgcgcgggtg
     2221 gcaggtgctc cgcgtggacc ggttcgtgga gcggcagcag taccggcggc ggttcgagga
     2281 gaagacgctc cagttggcgc gcatggtggg ggcccgggcg gcggaggcgg tcattgccac
     2341 ccacgtcgag aacgcgatcg gcttctacga gctggtgcgg ggggtgttgc cggtggagca
     2401 ggccaccgac cactatctgc gggagttcag cctgccgtcc agcacggccc agatggtatg
     2461 gcagcgggtg caggcgcgag tggccggcca ggagctcacg gcgcagtact ccgaccctcc
     2521 tcctccaccg ctcgagcctg agttcacgga gtccgagccc gagcccgagc ccgaaccgga
     2581 gcacgccgcg ctcacctccg cctatcccga gtcgttgggc gagctggagg aagaggcgat
     2641 cagaactcga agcccatacc cagattgacc tgggttgcgg tgaggtcgcc gaccggctcg
     2701 cggtagcggg tacggaggtg gcgcacctcc accccgagga ccgcgggcag ccgccgccag
     2761 gtcacgtgcc cctcgaccgc caggttgcgt aagcgcgagg catcgccgag atcgtcgtcg
     2821 tccgggtcgt cgatgccggc cccgccaccg atctcccacc gcaccgacgg ccgcaggttg
     2881 agctgggccc agccgccgat ggaccgcacc ggcaccccgt cacggaccat gttctggccg
     2941 atcccgccgc cacccaggcc cccgacggcc tgcccggtga acgcctccgc gcggaaatcg
     3001 agcctggagc ccagcggcgt ccagacgctc accgcgaggg ccttcgacgg cacccgcgcc
     3061 cccgcggcgt ccaggatcca gccgtagtgc ccacccgcgc tcacctcgcc cagctgctca
     3121 ccctggcccc agcgtccacg cacccggccc tgcaggaagg gtcggccgct gcgttccgcg
     3181 atgtcgggct gggtggcgaa ggcgccctgc gggtcgccgg aggtcggcgc cagggcggcg
     3241 atctcgaccc ctacccggac ggcgccgctg gcggggagat cggcgctcag cctgatctgc
     3301 gggatccaga gccagaggtt tccggccccc gcgaagtcgg ggaagccgac gctcgcaatg
     3361 gacgaggggc tcaccgccgc gatggggggc gactcctggc ccaccagcag ggcgacccgg
     3421 ttccaggtca gctccgcgac cgcgcgccgc acacggagca gcgggaacgt gcggcccccg
     3481 gtcgagggct gctgcccgcc gaagaagtcc acgtccagct caccctcgag cactccgccg
     3541 gcgaattcgg gtaccagggc gaacgcggtg acgcgcgact ggcgcaccgt ggcgctcgag
     3601 ctgctgccct cgggcgcggt ggcacccggc ggcaccgcga actggggcac gtcgctgttg
     3661 ttgacgttgt cggtcgtgtg gaaggcattc atcagaatga ggccgtggac gctggcctcg
     3721 atatccggct cctgtgccgg cgcgggagcc gccgccaccg cggcgagagc ggcgagcatc
     3781 gcggcgagcc gcagcgccgg gacccgcgtt gacgcgctcc ggagcgctcg gtaacctttg
     3841 ggcatgcgag gcaaaataca gcccggcccc gccgtccgcc gcgtccttgc gctgggaggg
     3901 ctggcggtcg ggtcgctcgc ctgggccgcg cagcccgcgg aggtgaccgg gcgcgtgacc
     3961 atgctggaga aggacgacca gcggggcgac gacgtgggcc aggcggtcgt gtggctgacc
     4021 ggcccgccgg cctcgccccg ttctcccatc gagaccgacc tgggaacctc ggacaaggag
     4081 ttctcacccc acgtcctggt ggtgccggtg gggtccacgg tctccttctc caatcacgac
     4141 cccttcaacc acaacgtgtt ctccctctcg gaggagaatc cgttcgacct gggcctgtac
     4201 ggccgcggcg aggcgcgctc ggtgcgcttc gagcggcccg gcgtggtgcg ggtctactgc
     4261 aacgtgcacg cccagatgag cgcgctggtg ctggtgcggg acacgccgtg gtacacccag
     4321 cccgcgagcg acggctcctt ctccctcggc gcagtgcctc ccggccgcta taccctgcac
     4381 gcctggcacg agcgcgcacc cgaggtggct cggccgctcg aggtgacggc cgagggcggg
     4441 gagccgctga gcatcgagct cgacgcccgc ggcttccagt tcaagcccca cctcaacaag
     4501 cacggccagc cgtaccctca gcagggccgg cgctactgac cgggtcgctg gtccgcgggc
     4561 catgaagctc ccgctcggcc gccgcatctt cctcggcacg acgctggtgg tcgtcgcggt
     4621 gctcggctcg gcgctcctgg tgacccaaca gcgggccggc gcggccgcgg acgaggcttc
     4681 ggcccgcgcg ctgggcgcca ccgcctcgtc catcgaggag gcgctggcca gccgcagcga
     4741 gacgctgctg cgcctgaccc aggcgctggt ccaggtgccc gcctacgtct cccgcatcgg
     4801 cgaggcgctc cgcgccagcg atcgcgccaa tctcctcgac caggccgacg agctgcgggt
     4861 gcagaccggt gccgactggg tcctcatcac cgaccgcgcc ggcgtgctcc aggcctggac
     4921 cgagcgccgc gggatcttcg gcgaggattt ctcccgcggc gcgctgatcg gccgggcgat
     4981 ggagggacag atcacgcagg gcctctggct cgagccgacc gaggacgggg acgcgctcta
     5041 ccaggcggtc ggcgtgccgg tggcgaacgc cggcagcgcg acgcccttcg gcgtggtggt
     5101 ggccgcactc caggtggaca gcgccttcgc ggcgcagctg cgccggaaca ccgactcgga
     5161 gatcgccttc ttctcgctcg acacgctcgg cgtgccgcag gtggcggtct cgagcctgcc
     5221 gcgcgagacg gtcgtgggcg agcttcgccg agcggccatg gcgacggagg aggacaccac
     5281 cttcgcccgc ttcacggtga ccgcgaacgg cgagcgctac gtcgccgcgg cggggctcct
     5341 ccgcagcgcc gacggcgtgc cactgggcgg cttcgtcggg ctccattccc gcgaccagga
     5401 gctggcggcc taccgccagt tgagccggac gatcggctgg tcgttcgtgg tgggcctgct
     5461 gctcgccctg gcgttctcgg tgctgatggc cagacggatc acgctgccgg tccgggagct
     5521 ggtccgcgcg acgcgggagg tgagcgaggg tcagtacacc ggccggatcg tgggcactac
     5581 ggacgacgag atcggcgagc tggcctccgc cttcggccac atggtggagg agctcaagga
     5641 gaaggagcgg ctggtcgact acctccggac cggcggccag cggggggatg ggagtgccac
     5701 gctgccgccg atcctacccg gtgcccggcc cgagggggga acgctcgcgg tcgggcagcg
     5761 attcgcgggc cgctacgaca tccaggaggc gctcggctcc ggcggaatgg gtgtggtcta
     5821 tcgagccttc gaccgcgagg tgggcgagac gctggc
//
LOCUS       DASUYN010000234         3113 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1179076, whole genome shotgun sequence.
ACCESSION   DASUYN010000234 DASUYN010000000
VERSION     DASUYN010000234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3113
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1179076"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(123..1109)
                     /locus_tag="VF061_04675"
     CDS             complement(123..1109)
                     /locus_tag="VF061_04675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HEX6668825.1"
                     /translation="MTIALAPLGADEAERGAAAARAVAEQLGRVVLGQEGAVRDVVAA
                     LIARGHVLLEGVPGTAKTLLVRTLSQVLRLQFRRIQFTPDLMPSDITGVNLLAGPPGT
                     FTFRPGPIFGDLVLGDEINRAPAKTQAALLEAMQERRVTVDGVSHELPESFTVFATQN
                     PIEFEGTYPLPEAELDRFLVKVVLDYPEDSVEQGILQRVLGGFEADVPRSYGVDPVED
                     AAGLARLREACRRVRVEPSLVAYIAAIVRATRSAPVLTLGASPRGSVALLKMAQAAAL
                     MDGRPYVVPDDVKALAPAVLRHRVMVAPELELEGVASDIALRGIIEKIEAPR"
     gene            complement(1106..2317)
                     /locus_tag="VF061_04680"
     CDS             complement(1106..2317)
                     /locus_tag="VF061_04680"
                     /inference="COORDINATES: protein motif:HMM:NF025617.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4350 domain-containing protein"
                     /protein_id="HEX6668826.1"
                     /translation="MQPRTELALSAGLLLVIGMVVVAIGSRRDRPDPDDSPRSTYLSS
                     PGGASAFAEAAARLGLVVERYRRSTATLRLPDSVSRGAVIAVLGPDRPLAALEARHLV
                     QLPTDLLLAGPGAESAIRCFGYHVRARERRDSIRTRSPEGAEPLPAPRVSAVLVAHTA
                     RRIVDSTAAYDGRRVPCEVPQPSGVDTLLETIRGHLVVVRLSFQEGRTAILVADDGLF
                     RNRTLRETLAGTFVLGLVTDRYERLIVDEYHHGYTAAGSLGGAALVWSTRSPWGWMVW
                     QLVAVGVVALLASGVRFGPVRSVIERRRRSPMEHVRALATALAAARGHDVAVRLMVQG
                     LRRRLSRGGRPAGADLDTWLAGLADSIRSDRGREALAMLTATLRTPPDAETVLAAGNA
                     VETLWEELKPT"
     gene            complement(2301..2921)
                     /locus_tag="VF061_04685"
     CDS             complement(2301..2921)
                     /locus_tag="VF061_04685"
                     /inference="COORDINATES: protein motif:HMM:NF024948.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4129 domain-containing protein"
                     /protein_id="HEX6668827.1"
                     /translation="MAFQGEERVDRYRAALDSVFATEPYQWTPPPPILELLSEWWEGL
                     RAWLDGLRTDNPLLFRVLFAALLIVWLGIFAHAAWLVWQTVRGAARSERETATPAPGE
                     RRDAAWYSRAADRAAEEGRLTEALQLAFVALALTLEEGGLLKYHPSKTPAECAREARL
                     SGTDRDRLRALVRTLYASAFGGRAIGPEDYRRWRELGAGPWHAAAH"
     gene            complement(2925..>3113)
                     /locus_tag="VF061_04690"
     CDS             complement(2925..>3113)
                     /locus_tag="VF061_04690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668828.1"
                     /translation="AVVLPGGLLGVAPGMLTLAVVGVVQILLYPLFYCVLTVAYYDLR
                     VRKEGFDLEVLASTLQPA"
BASE COUNT          469 a         1173 c         1106 g          365 t
ORIGIN      
        1 ggccagccac agcgcgtcga gcgcgagcag cacgtcgaga ccgccgggca gccacggcgc
       61 ggcgggggcg accagggcga gagccgcgcc gatccagagc cagcggcgcg acggcaccgg
      121 cgtcatctcg gcgcctcgat cttttcgatg atcccccgga gcgcgatgtc cgaggccacg
      181 ccctcgagct ccagctcggg cgcgaccatc acccggtgcc gcagcaccgc gggcgccagc
      241 gccttgacgt cgtcggggac gacgtacgga cggccgtcca tcagcgccgc cgcctgcgcc
      301 atcttgagca gggcgacgct cccgcggggc gacgccccga gcgtgaggac cggcgcggag
      361 cgcgtcgccc gcacgatcgc ggcgatatag gcgaccaggc tcggctccac ccggaccctg
      421 cggcaggcct cgcgcaggcg cgcgagcccc gcggcgtcct ccaccgggtc caccccgtag
      481 ctccgcggga catcggcctc gaagccgccc agcacccgct gcaggatccc ttgctcgacc
      541 gagtcctccg gatagtcgag caccaccttc accaggaacc ggtccagctc ggcctcgggc
      601 agcgggtagg tgccctcgaa ctcgatcgga ttctgggtgg cgaagacggt gaacgattcc
      661 gggagctcgt gcgagacccc gtccacggtc acccgccgct cctgcatggc ctcgagcaag
      721 gcggcctggg tcttcgcggg cgcccggttg atctcgtccc ccagcaccag atccccgaag
      781 atcggtccgg ggcggaaggt gaaggtgccc ggtgggccgg ccagcaggtt cacgccggtg
      841 atgtccgagg gcatgaggtc gggagtgaac tggatccggc ggaactgcag gcggagcacc
      901 tggctgagcg tgcggaccag gagggtcttc gcggtccccg gcaccccttc caggagtacg
      961 tggccccgcg cgatcagcgc cgcgaccacg tcccgcacgg ctccctcctg tcccagcacc
     1021 acgcggccga gctgctcggc gacggcacgg gccgctgcgg ctccgcgctc ggcttcgtcg
     1081 gcgcccagcg gcgccagggc gatcgtcatg tcggcttcag ctcctcccag agggtctcca
     1141 cggcgttgcc ggcggccagc acggtctcgg cgtcgggagg ggtgcgcaac gtggcggtca
     1201 gcatcgccag cgcctctcgg ccgcgatcgc tccggatcga gtccgccagc ccggcgagcc
     1261 aggtgtcgag gtcggctccc gcgggccgac ccccgcgaga gagccggcga cggaggccct
     1321 gcaccatgag ccgcaccgcg acgtcgtggc cccgcgcggc ggcgagcgcc gtggccagcg
     1381 cgcggacgtg ctccatcggc gaccggcgcc gtcgctcgat cacgctgcgc accgggccga
     1441 agcggacccc cgaggcgagc agcgccacca ccccaaccgc caccagctgc cagaccatcc
     1501 agccccacgg cgatcgggtg ctccagacga gggccgcacc gcccagcgag cccgccgccg
     1561 tgtacccatg atggtactcg tccacgatca gccgctcgta gcggtcggtc accaggccca
     1621 acacgaacgt cccggccagg gtctcacgga gcgtgcggtt gcggaacagg ccgtcgtcag
     1681 ccaccaggat cgccgtcctc ccctcctgaa acgagagccg caccaccacc aggtgccccc
     1741 ggatggtctc cagcagcgtg tccaccccgc tcggctgggg cacctcgcac ggcacgcggc
     1801 ggccgtcgta ggcggcggtg gagtccacga tccgtcgcgc ggtgtgagcg accagcacgg
     1861 cggacacgcg cggcgccggc agcggctcgg caccctccgg gctgcgggtc ctgatcgagt
     1921 cccggcgttc cctcgctcgc acatggtacc cgaagcagcg gatggccgac tcggcgccgg
     1981 gtccggccag caggaggtcg gtcggtagct gcaccaggtg acgcgcctcc agcgcggcga
     2041 gcggccggtc gggcccgagc accgcgatca ccgcgccgcg cgagacggaa tcgggcagcc
     2101 ggagcgtcgc ggtcgacctc cggtagcgtt cgaccacgag cccgagccgc gccgcggcct
     2161 cggcgaaggc gctggcgccg ccggggctgc tgagataggt ggagcgcggc gaatcgtccg
     2221 ggtcgggacg gtcccgccgc gagccgatcg cgaccacgac catgccgatc accaggagga
     2281 gaccggcgga gagcgcgagc tcagtgcgcg gctgcatgcc agggtccggc gccgagctcg
     2341 cgccagcggc ggtagtcctc gggtccgatg gcgcgacccc cgaatgcgct ggcgtagagg
     2401 gttcgcacca gcgcccgcaa gcgatcccga tccgtgccgc tgagccgagc ctcccgcgcg
     2461 cactccgccg gagtcttgct cgggtggtac ttgagcagtc ccccttcctc gagcgtcaga
     2521 gcgagggcca cgaacgcgag ctggagcgcc tcggtgagcc ggccttcctc cgccgcgcgg
     2581 tcggccgcgc gagaatacca ggcggcgtcg cgccgctctc cgggggccgg ggtcgccgtc
     2641 tcacgctccg agcgggcggc gccacggacg gtttgccaca ccagccacgc ggcgtgggcg
     2701 aagataccga gccagacgat caggagggcg gcgaagagca cgcgaaagag cagcgggttg
     2761 tccgtcctga gcccgtccag ccaggcgcgc agtccctccc accactcgga aagcagctcc
     2821 aggatcggcg gcggcggggt ccactggtag ggctccgtcg cgaagacgga gtccagcgcc
     2881 gcccggtagc ggtcgaccct ttcctcgccc tgaaacgcca cggctcaggc gggctgaagg
     2941 gtcgaggcga gcacctccag gtcgaagcct tccttccgca cccggagatc gtagtaggcg
     3001 acggtgagca cgcagtagaa cagcggatac aggagaatct gcaccacacc caccacggcc
     3061 agcgtcagca tccccggcgc cacgccgagg agaccgcccg ggagcaccac ggc
//
LOCUS       DASUYN010000235         2327 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1398603, whole genome shotgun sequence.
ACCESSION   DASUYN010000235 DASUYN010000000
VERSION     DASUYN010000235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2327)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2327)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2327
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1398603"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..548)
                     /locus_tag="VF061_04695"
     CDS             complement(<1..548)
                     /locus_tag="VF061_04695"
                     /inference="COORDINATES: protein motif:HMM:NF012730.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005216 - monoatomic ion channel activity
                     [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ion transporter"
                     /protein_id="HEX6668829.1"
                     /translation="MSVPPGGLRARLHEVIFEADTPAGRAFDLLLLLAIVASVIVVML
                     ESVASVRARAGPTLRALEWGFTILFTVEYALRLVSVRRPLRYAVSAFGLIDLLAILPT
                     YLSVILPGAQSLLVVRLLRLLRIFRVLKLAEYLRESRVLAQAMRASRRKIEVFLLVVV
                     TIVVVVGALMYVIEGERHGFTS"
     gene            complement(559..>2327)
                     /locus_tag="VF061_04700"
     CDS             complement(559..>2327)
                     /locus_tag="VF061_04700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668830.1"
                     /translation="SPSPVRRRGIPVAATALVLGILIGLGVLFAWRRGHGDGPAGDTR
                     VLAVLPFENLGDSSDAYFADGVTDEVRTKLAQVSGLEVIARGSSNEYRGTSKQAQEIA
                     RDLGATYLLTGTVRWTKSPDGGSRVRVSPELVEVLPGQAPRTRWGEPFDARLTDVFEV
                     QAEIAGKVVSALDVALADSARQELVARPTQSVAAYDAFLKAEAEVLAGGPSSGRRAVA
                     LYQEAIRLDSSFALAWARLGRTGAFLYVNTGSQPEVAAVTRLAAERARRLAPHHPETS
                     VALVYTEAFINRDPERALGIAEQGLRVAPNNSDLLAAAASQEQTLGRFQAAVARLERA
                     FAIDPRSSAISRRLGYAFMVLRRYPEAKIAFERGMALAPGNPTILQNMALMALAQGDV
                     EAVRRMIANPGRGIESDALAAHLAQFEELGWALDESQQARLLAAGPERFEDDRAAWAI
                     VQAHLHHLRGDRARTRAWGDTARMAFEEQLREAPEDPQLLVIHGVALAYLGRYPDAIR
                     GGKRAVELLPPSRDMYFGPYIQHQLVRIYLLAGDRERALDVLEPLLEMPYTLTPAWLR
                     IDPMFAPLRGNPRFERLARGTK"
BASE COUNT          350 a          806 c          875 g          296 t
ORIGIN      
        1 atgctggtga agccgtgccg ctcgccctcg atcacgtaca tcagcgcccc cacgacgacc
       61 acgatcgtga cgacgacgag gaggaagacc tcgatcttgc ggcggctcgc gcgcatcgcc
      121 tgggccagga cccgcgactc gcggaggtac tcggccagct tgaggacccg gaagatccga
      181 agcaggcgga ggagccgcac gacgagcagg ctctgcgcgc ccggcaggat gacgctcagg
      241 taggtcggca ggatggcgag gaggtcgatg aggccgaagg cgctcaccgc gtagcggagc
      301 gggcggcgaa cgctgacgag gcggagcgcg tactcgaccg tgaagaggat ggtgaagccc
      361 cactccagtg cgcggagcgt cggcccggca cgggcccgca ccgaggcgac gctctccagc
      421 atcacgacga tgacgctggc gacgatcgcg aggaggagca ggaggtcgaa ggctcggccc
      481 gcgggagtat cggcttcgaa gatcacttcg tggagcctgg cgcgaaggcc gccgggcgga
      541 acgctcatgt cgcgagcgtc acttcgtacc tcgggccagc cgctcgaagc gcgggttgcc
      601 acggaggggg gcgaacatgg ggtcgatgcg gagccaggcg ggcgtgagcg tgtacggcat
      661 ctcgagcagc ggctccagca cgtcgagcgc gcgctcgcgg tcgccggcga gcaggtagat
      721 ccgcaccagc tggtgctgga tgtacggtcc gaagtacatg tcccggctcg gcggcagcag
      781 ctcgaccgcg cgcttgcccc cccggatggc atcggggtag cggcccaggt aggccagggc
      841 gaccccatgg atgacgagca gctgcggatc ttcgggagcc tcccggagct gctcctcgaa
      901 ggccatccgc gcggtgtccc cccaggcgcg ggtgcgggcg cgatcaccgc gcaggtggtg
      961 cagatgcgcc tgcactatcg cccaggcggc gcggtcgtcc tcgaaccgct ccgggccggc
     1021 cgcgagcagg cgcgcctgct gcgactcgtc cagcgcccag cccagctcct cgaactgagc
     1081 caggtgggcc gccagcgcgt cgctctcgat gccgcgcccg gggttggcga tcatgcggcg
     1141 aacggcctcg acatcgccct gcgccagggc catgagggcc atgttctgca ggatggtggg
     1201 attccccgga gcgagcgcca tgccccgctc gaaggcgatc ttggcttcgg gatagcggcg
     1261 cagcaccatg aaggcgtagc ccagccggcg gctgatggcc gaggagcgcg ggtcgatcgc
     1321 gaaggcccgc tccaggcgtg cgaccgcagc ctggaagcgg ccgagtgtct gctcctgtga
     1381 ggccgcggcc gccaggaggt ccgagttgtt gggcgccacc cggaggccct gctccgcgat
     1441 gccgagggcc cgctccgggt cccggttgat gaaggcctcg gtgtagacca gggcgacgga
     1501 ggtctccggg tgatgcggcg cgagacgccg ggcccgctcc gcggcgagcc gggtgaccgc
     1561 cgccacctcc ggctgcgaac ccgtgttcac gtagaggaag gcgcccgtgc ggccgagccg
     1621 cgcccaggcc agcgcgaagc tggaatcgag ccggatggcc tcctggtaga gggccaccgc
     1681 tcgccgcccg ctggaggggc cgccggccag gacctcggcc tcggccttga ggaacgcatc
     1741 gtaggcggcc acgctctgcg tcggccgggc gaccagctcc tggcgcgcgc tgtccgccag
     1801 cgccacgtcg agcgcgctca ccaccttgcc ggcgatctcc gcctgcacct cgaacacgtc
     1861 ggtgagccgg gcatcgaacg gctcgcccca ccgggtgcgc ggcgcctggc cgggaagcac
     1921 ctcgaccagc tcgggggata cccgcacccg gctaccacca tcgggcgact tcgtccaccg
     1981 caccgtgccc gtgaggaggt aggtggcgcc gaggtcccgg gcgatctcct gggcctgctt
     2041 gctggtgccc cggtactcgt tggagctgcc ccgggcgatc acctcgagcc cgctcacctg
     2101 ggccagcttg gtgcgcacct cgtcggtgac gccgtcggcg aagtaggcgt cggacgagtc
     2161 gcccaggttc tcgaagggga ggacggcgag cacccgggtg tcgccggccg gcccgtcgcc
     2221 gtgtccccgc cgccacgcga agagcacgcc gagaccgatg aggatcccga gcaccagcgc
     2281 ggtcgcggca accgggatgc cgcgtcggcg gaccggggag ggggagg
//
LOCUS       DASUYN010000236         3090 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_76633, whole genome shotgun sequence.
ACCESSION   DASUYN010000236 DASUYN010000000
VERSION     DASUYN010000236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3090)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3090)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3090
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76633"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1229)
                     /locus_tag="VF061_04705"
     CDS             complement(<1..1229)
                     /locus_tag="VF061_04705"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX6668831.1"
                     /translation="MKLARLALVLLVVACTRDRASCPTCDTVVIAAIGEPASILPPLV
                     DESVARDIGDQIYERLAVLETGRAPLDVSAYRPALAERWERLDSLTWRFRLRPGARWH
                     DGRPVTAEDVHFSFEAFGDSALHTGAEPYLAGRVQVTPEDSATFTVRFAAPSPEQLYD
                     ATYHVRVIPKHVWEPMPRAAWAADTSTARLVGSGPFRLERWERGQYLVLAADSGAGER
                     PRLRRAIWRFTGDPDAALNLVLSHEADLLESAIGPERARRAAGDPTLRLIPYPSAAYG
                     FLGFNLRDRRRRGAHPVLGDRETRRALTLGVDRTVLARSVFGEDAKAPPGPMSRLLWI
                     WSDDISTLPFDTAAARESLDAAGWRPEAGGVRHRAGRRLAFDILVPSTSGSRRQLAVQ
                     LQEAWRGLGAEVTVTAV"
     gene            1512..2840
                     /locus_tag="VF061_04710"
     CDS             1512..2840
                     /locus_tag="VF061_04710"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HEX6668832.1"
                     /translation="MQSEWRVELALFSDSFRSTVASIVEELGGTASVSKPGTDQARRI
                     ADVVLLLGGGAESQALDFLAESGSAVPRYLIGAAADHRIAAAALQSGARDYFALPDDL
                     DLLRRCLERLAREAASRVEAGRFTDAERRATGFEAIVGSSAALRHALDQAARVAPLRD
                     LTVLLGGETGTGKELLARALHYGSPRAGDPFVEVNCAAIPANLLESELFGHERGAFTG
                     AVAAKPGLFEIAHGGTLFLDEIATLPLELQPKLLRALETRSIRRVGGQQGRQVDVRVL
                     AASHVDLGQAVRRGEFREDLYYRLNVVTLVLPPLREREGDVELLAGTFVRRIATSYGL
                     PVPELTAETRTALRAHRWPGNVRELRNVLERAVVLSPPGTLRLGPLDESKGRMDSAGV
                     LPFPAPLSEVVRTAAQAMLDLTGGNKSEAARRLGISRPRLQRLLDGTLEE"
     gene            2840..>3090
                     /locus_tag="VF061_04715"
     CDS             2840..>3090
                     /locus_tag="VF061_04715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668833.1"
                     /translation="MPMPLYRLLVLPLALTLACSDSGGPGGDDDVRPPSELTILRLSG
                     ESPRLFNPVASFWAVRGETRQVEISFEDDERPGEPGEEYL"
BASE COUNT          433 a         1108 c         1137 g          412 t
ORIGIN      
        1 tccaccgccg tcaccgtcac ctccgccccc agcccccgcc acgcctcctg gagctgcacc
       61 gcgagctgcc gtcgtgatcc actggtgctc ggcaccagga tgtcgaacgc cagccttcgc
      121 cctgctcggt ggcggacgcc accggcctcc ggccgccagc cggcggcatc cagcgactca
      181 cgagccgccg ccgtgtcgaa cggcagcgtg ctgatgtcgt cgctccagat ccagagcaac
      241 cgcgacatcg gccccggcgg cgccttcgcg tcctctccga acaccgagcg cgccagcacg
      301 gtgcggtcca ccccgagcgt cagcgcccgg cgcgtctccc ggtcacccag cacgggatgg
      361 gccccgcgtc gccgccggtc ccggaggttg aagccgagga agccgtacgc ggcggagggg
      421 tagggaatga gccgtagggt ggggtcgccc gcggcccgcc gggctcgctc ggggccgatc
      481 gcggactcca gcaggtccgc ctcgtgactc agcaccaggt tgagcgcggc gtccggatcg
      541 ccggtgaaac gccagatcgc acggcgaagg cgtggccgct cccctgcccc cgaatccgcc
      601 gccagcacga ggtactgacc ccgttcccac cgctccagcc ggaacggacc gctccccacc
      661 agtcgcgccg tgctggtatc ggccgcccac gccgcccggg gcatcggctc ccacacgtgc
      721 ttcgggatga cgcgcacgtg gtaggtggcg tcgtagagct gctccggtga gggcgcggcg
      781 aaacggaccg tgaacgtggc cgagtcctcg ggggtcacct ggaccctgcc cgccaggtac
      841 ggctccgccc ccgtgtgcag cgccgagtcg ccgaacgcct cgaaggagaa gtgtacgtcc
      901 tcggcagtga ccgggcggcc gtcgtgccac cgcgcgccgg ggcgcagacg gaaccgccag
      961 gtgagcgaat cgagccgctc ccatcgctct gccagggccg ggcgataggc cgagacgtcg
     1021 aggggggcgc ggccggtctc cagtacggcg agccgctcgt agatctggtc gccgatatcc
     1081 cgggcgaccg actcgtccac cagcggcggc aggatggagg ccggctctcc gatcgcggcg
     1141 atcaccacgg tgtcgcaggt gggacagctc gcccggtcac gggtgcacgc aaccacgagc
     1201 aggacgagcg cgaggcgggc gagcttcacg gagacctcgg tcaggggtgg tggtgcgggc
     1261 cggaaatgcc ccacagcggg ccggagacga gccctcacaa atgtaggggg gcgccccctg
     1321 taacggcgcg ttgcagctgc aacggaccga tgcggccggc cccgccggtc actccgagtg
     1381 ctggccagag atggctgccg ggcaacatct tacaggaagg cgtcacacgg cacgcgggtt
     1441 gccacccacc gtcggggggg tggtacgttc acggtgcgag gaggagatcg ctgagctcga
     1501 gcgcggggca ggtgcaatcc gagtggcggg tcgagctggc cctcttctcc gacagcttca
     1561 ggtccacggt ggcctccatc gtggaggagc tgggcgggac ggcgtcggta tcgaagcctg
     1621 gcaccgacca ggcgcggcgc atcgccgacg tcgtcctcct cctcggcggc ggggcggaga
     1681 gccaggcgct cgacttcctc gccgaatcgg gcagcgcggt cccgcgctac ctcatcggcg
     1741 cggcggccga tcaccggatc gcggccgcgg cgctgcagag cggggcccgg gactacttcg
     1801 cccttcccga cgatctcgac ctgctgcggc gctgcctcga gcggctcgcc cgcgaagcgg
     1861 ccagccgggt ggaagccggg aggttcaccg acgcggagcg gcgggcgacc gggttcgagg
     1921 cgatcgtcgg ctccagtgcc gcgcttcggc acgcgctgga ccaggccgcc agggttgcgc
     1981 cgctccgcga cctgaccgtg ctgctcggcg gcgagacggg gaccggcaag gagctgctcg
     2041 cccgcgcgct gcactacggc agtccccggg ccggcgatcc gttcgtggag gtgaactgtg
     2101 cggcgatccc ggccaacctg ctcgagagtg agctgttcgg ccacgagcgc ggcgccttca
     2161 ccggcgcggt ggcggccaag cctggcctgt tcgagatcgc ccatggcggc accctgttcc
     2221 tcgatgagat cgcgaccctg ccgctggagc tgcagcccaa gctgcttcgg gcgctggaga
     2281 cccggagcat ccggcgggtg ggcggccaac agggccgcca ggtggacgtg cgggtgctcg
     2341 ccgcctccca cgtggacctg ggacaggcgg tgcggcgagg cgagttccgc gaggatctgt
     2401 actaccggct gaacgtggtc acgctcgtcc tgcccccgct gcgcgagcgg gagggcgacg
     2461 tggagctcct ggccggaacc ttcgtccggc ggatcgcgac ctcctacggc ctgccggtgc
     2521 cggagctgac cgcggagacc cgcaccgccc tgcgggccca ccgctggccc ggcaacgtgc
     2581 gggagctgcg gaatgtgctg gagcgcgcgg tggttctctc gccacccggc acgctccggc
     2641 tgggaccgct cgacgagtcg aagggacgga tggacagcgc gggcgtgctg cccttcccgg
     2701 cgccgctttc ggaggtggtt cgcacggccg cccaggcgat gctcgatctc accggcggca
     2761 acaagagcga ggccgcgcgg cggctgggga tctcccggcc gagactgcag cgtctgttgg
     2821 acggaaccct ggaggagtga tgccgatgcc gctgtaccga ctgctggtcc taccgctggc
     2881 cctgacgctc gcgtgctccg actcgggtgg acccggcggc gacgacgatg tccggccacc
     2941 gtccgagctc accatcctgc ggctgagcgg ggagagcccg cggctcttca atcccgtcgc
     3001 gagcttctgg gcggtgcggg gcgagacccg ccaggtggag atcagcttcg aggacgacga
     3061 gcgccccggc gagccgggcg aggagtacct
//
LOCUS       DASUYN010000237         2389 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1180898, whole genome shotgun sequence.
ACCESSION   DASUYN010000237 DASUYN010000000
VERSION     DASUYN010000237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2389)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2389)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2389
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1180898"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..868)
                     /locus_tag="VF061_04720"
     CDS             complement(<1..868)
                     /locus_tag="VF061_04720"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEX6668834.1"
                     /translation="MRVLIVDDDAGLRQSLALLLQEAGYEALSEGDPEQALRRAGTEG
                     FDLILCDVRMPKMDGVSFLRRYRAEGGSALLIMMSGHGTEDSALAAMREGAYDYLHKP
                     FQPDEVTMTLRKAEEREKLRREVETLRTSLGAGVVQDLVVSESRAMRDLLELASRVAR
                     HNTTVLITGESGTGKEVLARAIHRMSPRAECSFVAINCAAIPEHLLESELFGHAKGSF
                     TGATADRAGLFELAHEGTLLLDEIGDLPLELQAKLLRVLEEGEVRRVGGREPRKVDVR
                     VIAATAKPLEQAV"
     gene            complement(849..2036)
                     /locus_tag="VF061_04725"
     CDS             complement(849..2036)
                     /locus_tag="VF061_04725"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEX6668835.1"
                     /translation="MDQPRRSLRTELLVNLGFVTSAAVMLVGLNTVLLLGGDLAEAWR
                     PLLVLWLGSTLVFVLFGSYLVHRLVIRPLRQLAAEADSLARGQVPVEPPAYETRELAD
                     LADCYRAMAEGLLDAQSHAVRVEKLAGIGRLAAGVAHEIRNPLGALGTYTDVLRRRGS
                     DPAVTGEMHTAIGRIDRIVQGLLDYARPGAANGRASAAQADLNAAVRTAVDFLVAQGM
                     LREVALDLRLEPGPIAVRGEPHGLEQVVINLLMNAAQASPGGRLAVATVRHDFEPRHG
                     TALRAGAELNGTGSNGAEPGRRRWAARPRRPDLEPGTPGAMLLVADDGPGVPESDRER
                     IFDPFFTTKEPGEGTGLGLAIVARTVHEAGGVVWVDRAREGGAVFKVFLPHASAADAC
                     ADR"
     gene            complement(2053..>2389)
                     /locus_tag="VF061_04730"
     CDS             complement(2053..>2389)
                     /locus_tag="VF061_04730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HEX6668836.1"
                     /translation="GILAAIAIPKFANTKEKAYASAMRSDLRNLASVQETYWTNNQVY
                     YGGLIPNLAAFQYRPSNGITVAIVSATPAGWSAQASAPGLTTQTCVIFYGVAPPIPPA
                     TVDAAVACT"
BASE COUNT          333 a          862 c          850 g          344 t
ORIGIN      
        1 ccaccgcctg ctccagcggc ttggcggtgg cggcgatcac ccgcacgtcg actttccgcg
       61 gctcccggcc gccgacccgg cgtacctcgc cctcctccag cacccgcagc agcttggcct
      121 gcagctccag gggcagatcg ccgatttcgt ccagcagcag ggtgccctcg tgggccagct
      181 cgaagagtcc ggcccgatcg gcggtggcgc cggtgaacga ccctttcgcg tggccgaaga
      241 gctccgactc caacaggtgc tccgggatgg cggcgcagtt gatggcgacg aagctgcact
      301 cggcccgggg gctcatccgg tggatggcgc gggcgaggac ttccttgccg gtgccgctct
      361 cgccggtgat gagcacggtg gtgttgtgcc gcgccacccg gctggcgagc tcgagcaggt
      421 cgcgcatggc gcggctctcg ctcaccacca ggtcctgcac cacgccggcg ccgagactgg
      481 tccgcagggt ctcgacctcg cggcggagct tctcccgctc ctccgccttc cgcagcgtca
      541 tggtgacttc atcgggctgg aacggcttgt ggagatagtc gtacgcgccc tcccgcatgg
      601 ccgcgagggc gctgtcctcg gtgccgtgtc cgctcatcat gatgagcagg gccgagcccc
      661 cctcggcgcg gtagcgccgg agaaaggaga cgccgtccat cttgggcatc cggacgtcgc
      721 agagaatcag gtcgaacccc tccgttcccg cgcggcggag cgcctgctcg ggatcgccct
      781 cggagagcgc ctcgtacccc gcctcctgga gcaggagggc gagcgactgg cggaggccag
      841 cgtcgtcgtc aacgatcagc acacgcatcg gcagcactcg cgtgaggcag gaagactttg
      901 aagaccgcgc caccctcacg agcacggtcc acccacacca cccctccggc ttcgtgcacg
      961 gtccgggcga cgatcgcgag gcccagtccg gttccttcgc ccggctcctt cgtggtgaag
     1021 aacggatcga agatccgctc ccggtcggac tcggggacgc ccgggccgtc atccgccacc
     1081 aggagcatgg cccccggcgt gcccggctcg agatcggggc gtcgcgggcg cgcggcccat
     1141 cgccgccggc cgggctccgc tccgttgctc ccggtgccgt tgagctcggc cccggcgcgg
     1201 agcgcggtgc catggcgggg ctcgaagtcg tggcgcaccg tggcgaccgc caaccggccg
     1261 ccgggtgagg cctgggcggc gttcatcagc aggttgatga ccacctgctc gagcccgtgc
     1321 ggctcgccgc gcaccgcgat cggccccggc tccagacgca ggtccagagc cacctcccgg
     1381 agcatgcctt gggccaccag gaaatccacc gcggtgcgca ctgcggcgtt gaggtcggcc
     1441 tgggcggcgg aggcccggcc gttggcggcc ccgggccggg cataatccag caatccctgc
     1501 acgatccggt cgatccggcc gatcgcggtg tgcatctcgc cggtgactgc aggatcgctg
     1561 ccgcgtcggc ggagcacgtc ggtgtaggtg cccagcgcgc cgagcggatt gcgaatctcg
     1621 tgcgccaccc ccgcggcgag ccggccgata ccggcgagct tctcgacccg caccgcgtgg
     1681 ctctgggcat cgagcagccc ctcggccatg gcgcggtaac agtcggcgag gtcggcgagc
     1741 tcgcgagtct cgtacgccgg gggctccacc ggcacctggc cccgggccag gctatcggct
     1801 tcggcggcga gctgccggag cgggcggatg accagccggt gcaccaggta gctgccgaag
     1861 aggacgaaga ccagcgtgct gccaagccag agcaccagca ggggccgcca ggcttcggcg
     1921 agatcaccgc ccagcagcag gacggtgttg agccccacca gcatcaccgc cgccgaggtg
     1981 acgaacccca ggttgaccag aagctcggtg cgcagcgagc gccgaggctg gtccatgcgc
     2041 ccggcccggg cctcaggtgc aggcgacggc ggcgtccacc gtggccggcg ggatcggcgg
     2101 ggccaccccg tagaagatca cgcaggtctg ggtggtgagc cccggggccg acgcctgcgc
     2161 cgaccagccg gcgggggtgg cgctgacgat cgcgaccgtg atcccgttcg agggccggta
     2221 ctggaacgcc gccaggttcg ggatcagccc gccgtagtag acctggttgt tggtccagta
     2281 ggtctcctgc acgctcgcca ggttccgcag gtcggaacgc atggcgctcg cgtaggcctt
     2341 ctccttcgtg ttggcgaact tcgggatcgc gatcgcggcc aggatgcct
//
LOCUS       DASUYN010000238         2054 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_298783, whole genome shotgun sequence.
ACCESSION   DASUYN010000238 DASUYN010000000
VERSION     DASUYN010000238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2054
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_298783"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1388)
                     /locus_tag="VF061_04735"
     CDS             complement(<1..1388)
                     /locus_tag="VF061_04735"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX6668837.1"
                     /translation="MSSSPRTPRHRAPRGRAARSALYAESRGSLVAAAPALSVRQVFA
                     RFWPLTKPFRVRLAVCLLFVAIGPAMDAAGIWVFKILIDDVLTPRDFSLFPLVAAAYV
                     GLAVAGGLLSFVDDYLCTWVGERFVLNLRTSLFAHLHRMSLGFFERRQLGDLMSRISS
                     DVNAIEQLVLSGVMQVIAHSVKILIFGGLLFYLNWKLALASLIAAPLFALASRYFSTR
                     IKAASREKRRRTGTISAVAEESLSNAALVQAYDRQASETKRFHTENLGAFAAQMVATR
                     LRATFGPFIDLLETAAVLLVIGIGIWQLAAGSMTLGGLLVFMAYLAQLYGPIRAFGSL
                     ANTAYAASAGAERIIEILDEKPSVTDPVNPRPFGRARGALSVENVTFTYPGVDTPSLT
                     ELRFTIAPGQKLAVVGASGAGKTTLTKLLLRFYDPDRGRVTLDGVDLRELSLADLRRN
                     LAPVLQETLVFDG"
     gene            complement(1479..1661)
                     /locus_tag="VF061_04740"
     CDS             complement(1479..1661)
                     /locus_tag="VF061_04740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668838.1"
                     /translation="MRELPMDIFALLSNVNPAPARRSGPGPERQHDRDGSKSKSWSKS
                     RGHKSHGNGRKHGKKH"
     gene            complement(1820..>2054)
                     /locus_tag="VF061_04745"
     CDS             complement(1820..>2054)
                     /locus_tag="VF061_04745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668839.1"
                     /translation="ALLWWPPLAFFLVLLWPTAAAGTIAVTGAALAVLGVAGSAVGQA
                     ITRRREPDTDDPSDAVAVGADLVVPLAVEQRAA"
BASE COUNT          316 a          679 c          787 g          272 t
ORIGIN      
        1 ccgtcgaaga ccagcgtctc ctgcagcacc ggcgcgaggt tgcggcgcag gtcggcgagc
       61 gagagctcgc gcaggtcgac gccgtcgagc gtgacccggc cccggtccgg gtcgtagaag
      121 cgcagcagca gtttggtcag cgtcgtcttg cccgccccgc tggcgcccac cacggcgagc
      181 ttctgcccgg gggcgatggt gaagcgcagc tcggtcagcg acggtgtgtc gaccccgggg
      241 taggtgaacg tgacgttctc gacgctcagc gcgcctcggg cccggccgaa cgggcggggg
      301 ttgaccggat cggtgaccga gggcttctcg tcgaggatct cgatgatccg ctcggcgccc
      361 gcgctggcgg cgtacgcggt gttcgccagg ctgccgaacg cccggatcgg gccgtagagc
      421 tgggccaggt aggccatgaa caccagcagc ccgccgagcg tcatggagcc ggccgcgagc
      481 tgccagatgc cgatcccgat cacgagcagc accgcggccg tctcgagcag gtcgatgaac
      541 ggcccgaacg tcgcccgcag ccgcgtggcc accatctgcg cggcgaaggc accgaggttc
      601 tcggtgtgga agcgcttggt ctccgacgcc tgccggtcgt aggcctgcac gagcgcggcg
      661 ttgctcaggc tctcctcggc gacggccgag atcgtgcccg tgcggcggcg cttctcgcgc
      721 gaggcggcct tgatgcgggt ggagaagtag cgcgacgcca gcgcgaacag cggtgccgcg
      781 atcagcgagg cgagcgcgag cttccagttc aggtagaaca gcagcccacc gaagatcagg
      841 atcttgacgc tgtgcgcgat cacctgcatg acgcccgaga ggaccagctg ctcgatcgcg
      901 ttgacgtcgc tggagatccg cgacatcagg tcgccgagct ggcggcgctc gaagaacccg
      961 agcgacatgc ggtgcaggtg ggcgaacagg ctggtgcgca ggttcagcac gaaccgctcc
     1021 ccgacccagg tgcacaggta gtcgtcgacg aacgagagca ggccccccgc caccgcgagg
     1081 ccgacgtagg ccgcggccac cagcgggaag agcgagaagt cgcggggggt gagcacgtcg
     1141 tcgatcagga tcttgaagac ccagatgccg gcggcgtcca tggcgggccc gatcgcgacg
     1201 aacagcaggc agaccgcgag gcggacccgg aacggcttgg tcagcggcca gaagcgggcg
     1261 aagacctggc ggacggacag ggccggggcg gcggcgacca gggagccgcg cgactccgcg
     1321 tagagcgcag agcgggcggc gcgcccacgg ggtgcccggt gtcggggtgt tctcggactg
     1381 ctgctcacga tgctggggga cggctcttct cgggggcgag ggcggcaaca gcggtggccc
     1441 cacccgcgaa cgcgaatggg gccaccgccg ggctcagttc agtgcttctt gccgtgcttg
     1501 cggccgttgc cgtgcgactt gtggccgcgg ctcttgctcc aggacttgct cttcgagccg
     1561 tccctgtcgt gctggcgctc cgggccgggg cccgagcggc gggccggagc cgggttgacg
     1621 ttgctcagga gagcgaagat gtccatgggg agctccctca ttccatccct cgtgggcacg
     1681 gttgcgcacc acgtgactgg tacaaggagc cggggggcct tcgggtgcgg cggtcgatgg
     1741 gttgccacac catcggggga acccggcgtt ccgacgggcg gatcggggcc ggatgtgagc
     1801 ggcgtcggac gtcgagagct caggcggccc gctgctcgac ggccagcgga actaccaggt
     1861 ccgccccgac ggccaccgcg tcggaggggt cgtcggtgtc aggttcccgg cggcgggtga
     1921 tcgcctgacc caccgcggaa ccggcgacgc cgagcacggc cagcgcggcg ccggtgaccg
     1981 cgatcgtgcc ggccgcggcc gtcggccaga gcagcacgag gaagaacgcc agcggcggcc
     2041 accacagcag cgcg
//
LOCUS       DASUYN010000239         2003 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1181091, whole genome shotgun sequence.
ACCESSION   DASUYN010000239 DASUYN010000000
VERSION     DASUYN010000239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2003
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1181091"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..489)
                     /locus_tag="VF061_04750"
     CDS             complement(<1..489)
                     /locus_tag="VF061_04750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668840.1"
                     /translation="MIPAGAELRRALAEAGADGWLLFDFHGLNPVTRRVLGLSGLNTR
                     RLFVLLPAEGEPVAVAHRIELQPLEDFPGRIVPYSRWGELHEALGSLVKGRTLAMEIS
                     HDDAVPYLDRVPFGVVELLRRLGATIVPSAALVSRFAAGWSAGEMADHRAAAEILARV
                     ARD"
     gene            complement(486..1091)
                     /locus_tag="VF061_04755"
     CDS             complement(486..1091)
                     /locus_tag="VF061_04755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668841.1"
                     /translation="MPTPATVPAILPLSLLEAIRNLDTPVEDGLEELAEEIVVRRLGL
                     SPTVAAQIQRYRQATEREGRVYLDEAVSVLRLVGRRPDAPLVFADGGRRAARYAARGR
                     RVPANSLARRLAQRSAAGIARRVFDGELRPGPEGSEVRMSEPLSVLALPDGAACAFYG
                     AAYGELLRLLTAFEGAMLHERCRSRGDEACVWRCAVAEVYE"
     gene            1245..1820
                     /locus_tag="VF061_04760"
     CDS             1245..1820
                     /locus_tag="VF061_04760"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX6668842.1"
                     /translation="MADPSPATRSFDDEALPHLDTLYRVALRLTGDPARAEDLVQDTM
                     LKAYRSWRQYRPGTNAKGWLLTILRNTFINDYRRRKLEPVAMDLEAAEPHAIFRDVAE
                     ADPEGAFFAQIVDRKVIEAIDALPTEFREVLVLSDVEGLSYAEIAETLQVPVGTVKSR
                     LFRARRQLQVALYAHAVEMGYIRPREEPRNA"
     gene            1813..>2003
                     /locus_tag="VF061_04765"
     CDS             1813..>2003
                     /locus_tag="VF061_04765"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HEX6668843.1"
                     /translation="MPEPIDCREAGERLQDYLKRELTAELAIEVRVHLERCRSCFHHA
                     RFEERFLQLLEERARRETCP"
BASE COUNT          305 a          764 c          689 g          245 t
ORIGIN      
        1 gtctcgggcg acccgcgcca ggatctccgc cgcggcccgg tggtccgcca tctcccccgc
       61 cgaccacccg gccgcaaacc gcgagaccag cgccgccgag ggcacgatcg tcgcccccag
      121 gcggcggagc agctccacca cgccgaacgg cacccggtcg aggtaaggca ccgcgtcgtc
      181 gtgggagatc tccatcgcca gggtccggcc cttcacgagc gagcccagcg cctcgtggag
      241 ctccccccac cggctgtagg gaacgatccg gccggggaag tcctccagcg gctgcagctc
      301 gatgcggtgc gccaccgcca ccggttcccc ctcggcgggg agcagcacga agagccggcg
      361 ggtgttgagc ccggacagcc cgagcacccg gcgggtaacc ggattgagcc cgtggaagtc
      421 gaacaggagc catccgtcgg ccccggcctc ggccagggcc cggcgcagct cggcaccggc
      481 gggaatcact cgtacacctc cgccacggcg cagcgccaga cgcaggcctc gtcgccccgg
      541 gagcgacagc gctcgtgcag catcgccccc tcgaacgcgg tgagcagccg gagcagctcg
      601 ccgtaggcgg ccccgtagaa ggcgcaggcg gcgccgtccg gcagagccag caccgagagc
      661 ggctcgctca tccgcacctc gctgccctcc ggcccggggc gcagctcgcc gtcgaacacc
      721 cggcgggcga tgcccgccgc cgagcgctgc gccagccgcc gggccagcga attggccggc
      781 acccgccgcc cccgcgcggc gtagcgggcc gcgcgccggc cgccgtcggc gaagaccagc
      841 ggcgcgtccg gccgccgccc caccagccgc agcaccgaca ccgcctcgtc caggtagacc
      901 cggccctcgc gctcggtggc ctgccgatag cgctggatct gcgcggccac cgtcgggctc
      961 aggcccagcc ggcggaccac gatctcctcc gccagctcct ccagtccgtc ttccaccggg
     1021 gtgtccagat tccggatcgc ctcgagcagg ctgaggggga ggatggcggg gacggtggcg
     1081 ggggtgggca cgggggagcc ggagttcggg tgagggcgag ggtctggtga gggtcgaggg
     1141 tcctaaggtc tagggtcgag ggtccagggt ccagagtcaa gggtcacttc gaccctcgac
     1201 gcccgaacac tagacactcg acccccgacc ctcgacattc tctcatggcc gatccctccc
     1261 ccgccacgcg cagcttcgac gacgaggcgc tgccccacct cgacacgctc taccgcgtgg
     1321 ccctccggct gaccggcgat cctgcgcggg ccgaagacct ggtgcaggac accatgctca
     1381 aggcctaccg ctcctggcgg cagtaccggc ccgggaccaa cgccaagggc tggctcctga
     1441 ccatcctgcg caacaccttc atcaacgact accggcgccg caagctcgag ccggtggcga
     1501 tggatctcga ggcggccgag ccccacgcga tcttccgcga cgtggcggag gccgaccccg
     1561 agggcgcctt cttcgcccag atcgtggacc gcaaggtgat cgaggcgatc gacgcgctgc
     1621 cgaccgagtt ccgcgaagtg ctggtgctga gcgacgtgga ggggctgagt tatgccgaga
     1681 tcgccgaaac actgcaggtg ccggtgggca cggtgaagtc gcggctcttc cgcgcccgcc
     1741 gccagctcca ggtggcgctc tacgcccacg cggtcgagat gggctacatc cgcccccgcg
     1801 aggagccgcg gaatgcctga gccgatcgac tgccgggaag ccggcgaacg cctccaggac
     1861 tacctcaagc gcgagctcac cgccgagctc gcgatcgagg tccgggttca cctggaacgc
     1921 tgtcggagct gtttccacca cgcccgcttc gaggagcggt ttctccagct cctggaggag
     1981 cgggcccgcc gggagacctg tcc
//
LOCUS       DASUYN010000240         3322 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_519616, whole genome shotgun sequence.
ACCESSION   DASUYN010000240 DASUYN010000000
VERSION     DASUYN010000240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3322)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3322)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3322
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_519616"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..316)
                     /locus_tag="VF061_04770"
     CDS             complement(<1..316)
                     /locus_tag="VF061_04770"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HEX6668844.1"
                     /translation="MALLALACLRAGAAQGQAVQGRVLELPGGEPIAGALVTLVDSAG
                     GEVTRGATSPSGGFMLSGDAAGRYHVLIRRIGQHPWRSPAFALAAGATYPVTFRVDAR
                     PYE"
     gene            349..1419
                     /locus_tag="VF061_04775"
     CDS             349..1419
                     /locus_tag="VF061_04775"
                     /inference="COORDINATES: protein motif:HMM:NF040149.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5700 domain-containing putative Zn-dependent
                     protease"
                     /protein_id="HEX6668845.1"
                     /translation="MRSCTPGFALVLALATPSVPPDLTIVTDQAEAALAILDLRSARE
                     PVPEEAWGRLLESEGYRRLKAREAAMGRAFDDSTFRAFLGSDTLLRRAPALRRTLHEW
                     RSARLDEAGRRALAYLPAGTPIRARVYLLIKPRTNSFVFEPATDPAIMLYLDPSRTRV
                     EQENTVAHELHHIGYATACRSTPDAPADSAVSTARQWLGAFGEGVAMLAAAGGPDVHP
                     HATSPEPDRVRWDRDVANAAADLGRVEAFLLDVLERRVTDPDSIGRVGMSFFGVQGPW
                     YTLGWVMASTVERDAGRTALVRLLCDPVSLLKAYNAAAARRPAGEAPPRWSEALLARL
                     SPPPGPRRPRRRRANRRRRSPG"
     gene            complement(1349..1993)
                     /locus_tag="VF061_04780"
     CDS             complement(1349..1993)
                     /locus_tag="VF061_04780"
                     /inference="COORDINATES: protein motif:HMM:NF025380.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4230 domain-containing protein"
                     /protein_id="HEX6668846.1"
                     /translation="MAEEGAREPRPLIPALLAIVALGVFLWLGSRATDLTDRLPLRGR
                     TTVDHGVVVERTRAVARLVTSESTLRDVVVYQNRLLGSTKRSLVVVTGKVLAGFDLDR
                     GTEVRVDHEAKVVHIVLPPAAVLGVEVTELRTYDEQSGLWNPFRPSDRDAIFRLAREQ
                     LVRSAGEIELANHTQESARRLLEALVSAEGYTTRVTFADDSHVGAGAAEAPAED"
     gene            complement(1993..2421)
                     /locus_tag="VF061_04785"
     CDS             complement(1993..2421)
                     /locus_tag="VF061_04785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668847.1"
                     /translation="MPFLLAALVLHLLAPSAVLAQRDARPDDFLGLTTCEAGTAVTTL
                     RPDVRDSLLVAEVEAHEAVHREQASVHLSCEAFLASLTSARRIIDAELPAYCAQWKVA
                     VARGADSGSTRREFAWRIAAQSGAMENRLQIARRFEEECH"
     gene            complement(2435..2908)
                     /locus_tag="VF061_04790"
     CDS             complement(2435..2908)
                     /locus_tag="VF061_04790"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEX6668848.1"
                     /translation="MSGRALREQIAAVLRWEDAHAGLDRVVAGVPLNRWSASAPGLPY
                     TLWQLLEHLRLAQHDILDFCRNPGYVELRWPEDYWPPANAVPTASDVSASLDGLRQDR
                     DSLTEMALDPTIDLFARIPHGTGQTYLRELLLVADHASYHLGQMVVVRRALGIWD"
     gene            2992..3243
                     /locus_tag="VF061_04795"
     CDS             2992..3243
                     /locus_tag="VF061_04795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668849.1"
                     /translation="MAFVWDLIQQIQLRNTKSKVKSATSTAKTAQSRAKAAETRVRSL
                     ESRLEALEEEVGDMRSTLAVLLDRLERRFGPETEKAGRA"
BASE COUNT          478 a         1186 c         1202 g          456 t
ORIGIN      
        1 gttcgtaggg gcgggcgtcc acccggaagg tgaccggata cgtggcgccg gccgcgagcg
       61 cgaaggcggg cgagcgccag ggatgctggc cgatccggcg gatgagcacg tggtaacgac
      121 ctgcggcatc gccggacagc atgaacccgc cgctgggcga cgtcgcgccg cgggtcacct
      181 cgccccccgc ggagtccacc agagtcacca gggcgcccgc gatgggttcc ccgccgggaa
      241 gctccagcac gcgcccctgg accgcctgcc cctgggccgc acccgcccgg aggcaggcca
      301 gcgccagaag agccaaccct ctcacccaca ccggtgtcgt aggtcgatat gcgatcatgt
      361 acccctgggt tcgcgctcgt cctggccctc gccacgccgt ccgtcccgcc cgatctcacc
      421 atcgtcaccg accaggcgga ggcggccctc gcgattctgg atctccggag cgcccgtgag
      481 ccggtgccgg aagaggcctg gggccgtctc ctcgagagcg agggttaccg gcggctcaag
      541 gctcgggagg cggcgatggg ccgtgccttc gacgactcca ccttccgcgc ctttctgggc
      601 tccgatacgc tgctccgccg cgcgcccgcg ctccggcgaa cgctccacga gtggcgcagc
      661 gcccgccttg acgaggcggg gcgaagggcg ctcgcctatc tccccgcggg aacgcccatc
      721 cgggccaggg tctacctcct catcaagccg cgcaccaaca gcttcgtttt cgagccggcc
      781 accgacccgg cgatcatgct gtatctcgac ccatcgcgca ccagggtgga gcaggagaac
      841 accgtcgcgc acgagttgca tcacatcggg tatgccacgg cctgccgctc tacccccgac
      901 gccccggcgg actccgcggt ttccaccgcg cggcaatggc tcggcgcctt cggcgaagga
      961 gtggcgatgc tggccgccgc gggagggccc gacgttcacc cccacgcgac cagccctgag
     1021 ccggaccggg tccggtggga ccgggacgtg gccaacgcgg cggcggacct ggggagggtc
     1081 gaggccttcc tgctcgacgt gctggagcgg cgggtgaccg acccggactc catcgggcgc
     1141 gtggggatgt cgttcttcgg ggtgcagggc ccctggtata ccctgggctg ggtgatggcg
     1201 tcgacggtag agcgtgacgc ggggcggacg gcactggtgc gcctgctctg cgatccggtg
     1261 agcctcctga aggcttataa cgcggcggcc gcccggcggc cggccggaga agcgccgcct
     1321 cgctggtcgg aggcgctcct cgcccggctc agtcctccgc cggggcctcg gcggccccgg
     1381 cgccgacgtg cgaatcgtcg gcgaaggtca cccgggtagt gtagccctcc gcgctgacca
     1441 gtgcctcgag caggcgccgg gcgctctcct gggtgtggtt cgccagctcg atctcccccg
     1501 cgctccgcac cagctgttcc cgtgccaggc ggaagatggc gtcccggtcc gagggccgaa
     1561 acgggttcca gagtccgctc tgctcgtcgt aggtccggag ctcggtcacc tccacgccga
     1621 ggaccgcggc cggcggcagc acgatgtgca cgaccttcgc ctcgtgatcc acccgcacct
     1681 cggtgccccg gtccaggtcg aatcccgcga gcaccttacc cgtgacgacc accaggctgc
     1741 gcttggtgga ccccagcagc cggttctggt agaccaccac gtcgcgcagg gtcgactcgc
     1801 tggtgaccag ccgggccacc gcgcgagtgc gctcgaccac cacgccgtgg tcgaccgtcg
     1861 tcctgccgcg gaggggaagt cggtccgtca ggtccgtggc ccgggatccg agccagagga
     1921 acacccccag cgcgacgatc gccaggagcg cggggatcag ggggcggggc tcccgggcgc
     1981 cctcctccgc catcagtggc actcctcctc gaaccgccgg gcgatctgca gccggttctc
     2041 catggcgccc gattgcgcgg cgatccgcca ggcgaactcc cgccgggtgg acccggaatc
     2101 ggcgccccgc gccaccgcga ccttccactg ggcgcagtag gccggcagct cggcatcgat
     2161 gatccgccgg gcgctggtga ggctcgccag gaacgcctcg cagctcaggt ggaccgacgc
     2221 ctgctcccga tggaccgctt cgtgggcctc gacctccgcc accagcagcg agtctcggac
     2281 atcgggcctc agggtggtga ccgcggtgcc cgcctcgcag gtggtgaggc ccagaaagtc
     2341 gtccgggcgc gcgtcgcgct gggcgaggac tgcggacggg gcgaggaggt gcaggacgag
     2401 cgcggcgagg aggaagggca ccggcggctc cgcgtcagtc ccagatgccg agcgcgcgcc
     2461 ggaccaccac catctgcccg aggtggtagg aggcgtggtc ggcgacgagc aggagctccc
     2521 ggaggtacgt ttgtccggtg ccgtgcggaa tccgggcgaa gagatcgatc gtcgggtcca
     2581 gcgccatctc ggtcaggctg tcgcgatcct gccggagacc gtcgagggag gccgagacgt
     2641 cgctcgcggt ggggaccgcg ttcgcgggcg gccagtagtc ctcgggccag cggagctcga
     2701 catatccggg gttgcggcag aagtcgagga tgtcgtgctg ggccaggcgc aggtgctcca
     2761 gcagctgcca cagagtatag ggcagccccg gcgcgctcgc gctccagcgg ttcaggggaa
     2821 cgcccgccac gacgcggtcg agaccggcgt gagcgtcctc ccagcggagc accgcggcaa
     2881 tctgttctcg cagcgcccgg ccgctcatgt cgcggaatga ggccggtcac agcggggcgc
     2941 cgcggggcct ggtagtctgg gtgagatcac catcatcctt ccggaggagc tatggcgttc
     3001 gtctgggatc tgatccagca gattcagctg cgcaacacga agtcgaaggt gaagtcggcg
     3061 acctcgaccg cgaagaccgc gcagagccga gccaaggccg cggagacccg ggtgcgctcg
     3121 ctggagtcgc ggctggaggc gctggaggag gaagtgggcg acatgcggtc caccctcgcc
     3181 gtgctcctcg accggctgga gcgccgattc gggccggaga cggagaaggc cggccgggcc
     3241 taggggcagg cccactcgat gccgccgatc cgctccacca cggcgaaccg gatgccgtgc
     3301 gcctggcagg cgtcctcgaa gc
//
LOCUS       DASUYN010000241         2327 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_961116, whole genome shotgun sequence.
ACCESSION   DASUYN010000241 DASUYN010000000
VERSION     DASUYN010000241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2327)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2327)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2327
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_961116"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..624
                     /locus_tag="VF061_04800"
     CDS             <1..624
                     /locus_tag="VF061_04800"
                     /inference="COORDINATES: protein motif:HMM:NF014606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015159 - polysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015774 - polysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis/export family
                     protein"
                     /protein_id="HEX6668850.1"
                     /translation="ALLAVVTFSVPAAAQTPTGNTSMLSPGDSVRVVVWRRPEFSGDF
                     VVAPNGTITHPLYRSVTVGGVPFATAEANLRRFLARFEENPEFVMEPLVRVAVSGEVD
                     RPRVYALRPETTIAEAVAVAGGTTREGDRDKVRVLRSEAGGQRELLVDLNDPTAGAGM
                     SPVLSGDQIVVDRKRSFFREVFVPALGVIGSIASIGLLIDRASRNNN"
     gene            635..>2327
                     /locus_tag="VF061_04805"
     CDS             635..>2327
                     /locus_tag="VF061_04805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668851.1"
                     /translation="MPAQPPSDRLLPGAYEPPLRPIEPGESAGAVSFRQAIAVVRRRL
                     QLILAVTAVGAALGLFLASRDPTTYRASAMLRMAGERQTITGDEGDAAPTVRSADPML
                     SIIELLRSRAVAGVVVDSLGLQLVSLTPEFSVEDLDQVQVDPRAAGDSVLLAFREDGV
                     SARRGERAVTAGYGQVVNLGVVQFLARSRPAAETVTLGIRSRESAIDALLVGLLVTRR
                     EMTDVIDVAFVAEDPRTAQRVVNSTVQAFQMLNVQWARERSKRKSEFLAERLAENDTM
                     LGRAQAELSTFRSRQQLASSADKLAAEQSALLQLDAQRAQLDADRQTFGSLLERLKGD
                     DEASREEALRALATSPAMADNPAIGGLYQQLLNYQGRIDSMTTGPWRASPNNPDLVQL
                     RGLARTTQDQLVQAVRSHIGAIEARVNALGSLRARTGAAMAILPAMAEEEMRLTRRVE
                     ALANMGDDLRMDYQRARMAEAVEAGDIDVVALAPLPSTPLLNSAALKVALGLILGLAL
                     GLVIAYILEALNTAVRRPEDLEAVLHVPGLAVIPRITDGSRSAQSHFRRLLGSGRK"
BASE COUNT          321 a          826 c          830 g          350 t
ORIGIN      
        1 gcactcctcg cggtcgtgac gttcagcgtt cccgcggcgg ctcagacccc tacggggaac
       61 acctcgatgc tgtcccccgg ggattccgtg cgtgtcgtgg tgtggcggag gcccgagttc
      121 agcggcgact tcgtggtggc gcccaacggg accatcaccc accccctcta ccgctcggtg
      181 accgtcggag gcgtgccctt tgccacggcg gaagccaacc tgcggcgctt tctcgcccgt
      241 ttcgaggaga accccgagtt cgtgatggag ccgctggtgc gggtcgcggt gtcgggcgag
      301 gtggaccggc cccgggtgta cgccctccgg ccggagacca ccatcgccga ggcggtggcg
      361 gtggcgggtg gcacgacccg ggaaggcgac cgcgacaagg tgcgggtgct ccgaagcgag
      421 gccggtgggc agcgggagct gctggtcgat ctcaacgacc cgacggcggg agccggtatg
      481 agcccggtgc tgtcgggtga ccagatcgtc gtggatcgca agcgaagctt cttccgcgag
      541 gtgttcgtgc cggcgctcgg cgtcatcggc tcgatcgcct ccatcggcct gctcatcgac
      601 cgcgccagtc ggaacaacaa ctaatcggat gcccatgccc gctcagcctc cctccgatcg
      661 cctgctcccc ggcgcgtacg agcccccact ccggccgatc gagccggggg aatcggcggg
      721 cgcggtgtcg ttccgccagg ccatcgccgt cgtacgccgg cggctccagc tcatcctcgc
      781 cgtcaccgcg gtcggcgcgg ccttggggct gttcctggcc tcgcgcgacc cgaccacgta
      841 ccgggcgtcg gccatgctcc gcatggcggg cgagcggcag acgatcaccg gcgacgaggg
      901 cgatgccgcc cccacggtcc gctcggccga tcccatgctc tcgatcatcg agctgctgcg
      961 gagccgcgcc gtcgcgggcg tcgtcgtgga cagcctcggc ctgcagctgg tcagcctgac
     1021 gccggagttc tcggtcgagg atctcgatca ggtccaggtg gatccccgcg ccgcgggtga
     1081 ttcggtgctg ctcgcgttcc gggaagacgg agtgagtgcc cgccgtggcg agcgcgcagt
     1141 gacggcaggc tacggccagg tggtgaatct gggtgtcgtg cagttcctcg cccgctcccg
     1201 gccggcggcc gagaccgtca ccctgggcat ccgctctcgg gagtcggcca tcgacgccct
     1261 gctcgtcggc ctcctggtca cccgccgcga gatgacggac gtgatcgacg tggcctttgt
     1321 ggcggaggat ccgcgcaccg cgcagcgggt ggtgaacagc acggtgcagg cgttccagat
     1381 gctgaacgtg cagtgggccc gggagcggtc caagcggaag agcgagttcc tggccgagcg
     1441 gctggcggag aacgacacca tgctggggcg ggcccaggcg gagctcagca ccttccggag
     1501 ccggcagcag ctcgccagct cggccgacaa gctggccgcg gaacagtcgg ccctccttca
     1561 gctcgacgcc cagcgggccc agctcgacgc cgaccgccag accttcggct cgctgctgga
     1621 gcggctcaag ggcgatgacg aggcctcgcg ggaggaggcg ctgagggccc tggccacctc
     1681 gccggccatg gccgacaacc cggcgatcgg cgggctctat cagcagctcc tgaactatca
     1741 gggccgcatc gattcgatga cgaccggtcc ctggcgggcc tcgcccaaca atcccgacct
     1801 ggttcagctc cgggggctcg cgcgcacgac gcaggaccag ctggtgcagg cggtgcgcag
     1861 ccacatcggg gccatcgagg cgcgggtcaa cgccctcggc tccctgcggg ctcgcaccgg
     1921 cgccgcgatg gcgatcctcc cggccatggc cgaagaggag atgcggctca cccggcgggt
     1981 ggaggcgctc gccaacatgg gcgacgatct ccgcatggac taccagcggg cccgcatggc
     2041 ggaggcggtg gaggcgggtg acatcgacgt cgtggccctc gcgccgctcc cttcgacgcc
     2101 gctcctcaac agcgcggcgc tgaaggtcgc cctgggcctg atcctcggcc tcgcgctggg
     2161 cctggtcatc gcctatatcc tcgaggcctt gaacacggcg gtgcgccgtc ccgaggactt
     2221 ggaagccgtg ctgcacgtgc ccggcctcgc cgtgattccc cggatcaccg acggctcgcg
     2281 cagcgcccaa tcccatttcc gccggctcct cggatcgggg aggaaga
//
LOCUS       DASUYN010000242         2018 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1400884, whole genome shotgun sequence.
ACCESSION   DASUYN010000242 DASUYN010000000
VERSION     DASUYN010000242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2018
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1400884"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..473
                     /locus_tag="VF061_04810"
     CDS             <1..473
                     /locus_tag="VF061_04810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668852.1"
                     /translation="QEESGIFEWLHRLPEALERRAVACVHPSALASREPVGALEVPDT
                     TSWADLERDTSAWLGNRMQRAAHERLYRLAPRVRATQDAGLLETWRRLATSDHCYYMS
                     TKRFADGEVHRYFSPYESPYDAFVAFMNAVTDLEGRCSASRRASRPAAEMAVTD"
     gene            543..986
                     /gene="mscL"
                     /locus_tag="VF061_04815"
     CDS             543..986
                     /gene="mscL"
                     /locus_tag="VF061_04815"
                     /inference="COORDINATES: protein motif:HMM:NF013869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="large conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HEX6668853.1"
                     /translation="MFKEFKEFVMRGNVLDLAVGIIIGGAFGTIVKSLVDDVIMPPIG
                     LALGNVDFADLFLMLKAGPKGAPPYATLAEAQAAGAVTINYGLFVNAIITFLIVALAV
                     FLIVRAANRLRPPQAAPVTTKDCPYCRLAIPIGATRCPQCTSELR"
     gene            1144..1695
                     /locus_tag="VF061_04820"
     CDS             1144..1695
                     /locus_tag="VF061_04820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668854.1"
                     /translation="MDDLSFIRRTMERATEFTAVPGWGGVAMGLTALLAALVAARTTS
                     PAAWVRCWLVAAGMALVIGGGTMAAKARRAGTPVLSWSGRRFVLSFLPPLAVGALLTL
                     VLVEHQVVHALPGTWLLLYGTGIVTGGAFSVRAVPVMGICFMLLGAAALFGPAAWGNA
                     LMAAGFGGLHLVFGLLIARRHGG"
     gene            1688..>2018
                     /locus_tag="VF061_04825"
     CDS             1688..>2018
                     /locus_tag="VF061_04825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEX6668855.1"
                     /translation="MAKSSLASRDHPEGESGRHRLEGVRGGAVGQGPLELDRLIHERM
                     RLAIVSALAVNASLTFNELKRLLDTTDGNLSVHARKLEEADYVVCTKSFEGRVPRTEY
                     RLSPQGRR"
BASE COUNT          283 a          718 c          690 g          327 t
ORIGIN      
        1 accaggagga gagcggcatc ttcgagtggc tccaccggct gcccgaggcg ctcgagcgcc
       61 gggccgtcgc ctgcgtgcac ccgtcggcgc tggcgtcccg ggagccagtg ggcgcgttgg
      121 aggtgccgga cacgacctcc tgggccgatc tcgagcgcga taccagcgcc tggctcggca
      181 accgcatgca gcgcgcggcg cacgagcggc tctaccgact ggcgccgagg gttcgcgcca
      241 cccaggacgc cggcctgctg gagacctggc gccggctcgc caccagcgac cactgctact
      301 acatgagcac caaacgcttc gccgacgggg aagtgcaccg ctacttcagc ccgtacgaat
      361 cgccctacga cgcgttcgtg gccttcatga acgccgtcac cgatctcgag ggacggtgct
      421 cggcgagccg gcgggccagc cggccggcgg cagagatggc ggtgaccgac tagcgcctgc
      481 cccgggccgc ccgcatatat ggacgtggtt caatcaccca ccctcccgag cgagtgtgag
      541 ccatgttcaa ggagttcaag gaattcgtaa tgcggggcaa tgtgctcgat ctcgcggtcg
      601 gcatcatcat cggcggcgcg ttcggcacca tcgtgaaatc gctggtcgac gacgtcatca
      661 tgcccccgat cggcctggcc ctggggaacg tcgacttcgc cgatctcttc ctcatgctca
      721 aggccggccc caagggcgcg ccgccgtacg cgacgctcgc ggaggcacag gcggccggag
      781 ccgtcaccat caactacggt ctcttcgtca acgcgatcat caccttcctg atcgtggcat
      841 tggctgtgtt cctgatcgtc cgcgccgcga accggctgcg ccccccgcag gccgcgcccg
      901 tgacgaccaa ggactgcccc tactgccgcc tggcgatccc gatcggcgcc acgcgctgcc
      961 cgcagtgcac ctccgaactg cgctaggctg aggctacctg ctcgatcgac ggcggggtag
     1021 ctttgcagcg caaagtactt gctggtaacg cgctattctt ctatactgac gctcatggcc
     1081 tcacctgagc gcattgcccg cccccatccc agccccaggg ctgagccgct gcatgtccgc
     1141 gcgatggacg acctgtcgtt catccgccgg acgatggaac gcgccaccga gttcaccgcc
     1201 gtcccgggct ggggtggggt cgccatggga ctcaccgccc tgctggccgc gctcgtcgcg
     1261 gcgcgcacca cctccccggc cgcgtgggtc cggtgctggc tggtggccgc gggaatggcg
     1321 ctggtcatcg gcggggggac catggcggcg aaggcccggc gggccggcac tccggtgctc
     1381 tcctggtccg gccgccgctt cgtgttgagc ttcctcccgc ctctggcggt gggagcactc
     1441 ctgacgctgg tgctggtgga gcaccaggtg gtccacgccc tgccgggcac gtggctgctg
     1501 ctctatggca ccggcatcgt gaccggcggc gcgttctcgg tgcgcgccgt gccggtcatg
     1561 gggatctgct tcatgctgct cggcgcggcc gcgctcttcg gcccggccgc ctggggcaac
     1621 gccctcatgg ccgccggatt cggtgggctc cacctggtct tcggactgct catcgcgagg
     1681 aggcacggtg gctaagtcca gtctcgcttc ccgcgatcat cccgaggggg agagtggacg
     1741 gcatcgcctg gagggcgtgc gcgggggcgc cgtggggcag ggtcccctgg agctggaccg
     1801 cctgattcac gagcgcatgc gcctcgcgat cgtgagcgcg ctggcggtga acgcgtcgct
     1861 cacgttcaac gagctcaagc ggctgctcga caccaccgac ggcaacctca gcgtgcacgc
     1921 gcgcaagctc gaggaggcgg actacgtcgt gtgcaccaag tcgttcgagg gacgggtgcc
     1981 gcggaccgag taccggctca gcccgcaggg ccgccggg
//
LOCUS       DASUYN010000243         2809 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_299726, whole genome shotgun sequence.
ACCESSION   DASUYN010000243 DASUYN010000000
VERSION     DASUYN010000243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2809)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2809)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2809
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_299726"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1141)
                     /locus_tag="VF061_04830"
     CDS             complement(<1..1141)
                     /locus_tag="VF061_04830"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX6668856.1"
                     /translation="MMDVFWRDARFAVRSLLRSPAFTAIAVLTLALGIGANTAIFSVV
                     YSVLLRPLAYADPERLMSVRAAYSATGTQDIPASQPEYHDYLQGVSALEDLAAVYPIS
                     INLTALGAPQRIQASVVSDNYFRLLGVAPAIGRDFTPDDDRGQIGYVVIISHDLWQKR
                     FGGDPGVIGKTVRLDDDPMTIIGIMPRGFRHVLESGASPMEVWAPIALDNPDTNFLNV
                     RNARVYDLIGRLKPGRTVEDARAELAVLAARLREQYPQIYPAAQGWHPVAHPLAEQVV
                     GDVRPALLVLLGAVGFVLLIGCANVANLLLARATVREREIALRTALGSSRGRLVRQLL
                     TESLVLAVLGGGLGLLLAAWGSSALGRLVALYLPRAGEIELSLPVL"
     gene            complement(1138..1848)
                     /locus_tag="VF061_04835"
     CDS             complement(1138..1848)
                     /locus_tag="VF061_04835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX6668857.1"
                     /translation="MALAIDPLIRLDGISKIFHTEEVETHALSRVSLAIRAGEFVAIC
                     GPSGCGKTTLLSLLGLLDSPSEGSYVLAGEPVASLSPAQRARVRSRAIGFIFQAFNLI
                     GDLDVYANVELPLRYRGLPPAERRALVHEALERVGLLHRIHHYPAQLSGGQQQRVAVA
                     RAVAGKPLVLLADEPTGNLDSRNGAQVMELLQELHAGGATIVMVTHDPRYVGRAGRNV
                     FLFDGRIVPRPPVELEVA"
     gene            complement(1850..>2809)
                     /locus_tag="VF061_04840"
     CDS             complement(1850..>2809)
                     /locus_tag="VF061_04840"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEX6668858.1"
                     /translation="AALVSAAPLEGGNSNGLVPEGRPLEIGSAVNSLMRVATPGYFET
                     MRIQLVRGRGFTAQDREGAPLVMVINETLAREAFPGQDPIGKRIACCESGPNGAPNWK
                     EVIGVARDTRAVGLDQEPMPEFYLPMLQAPAAAWTWTDRTLTLAVRARAGEPALMTPL
                     RQAVAEVDPLLPLYNLGTMQGRVMDSLAQSRFSTMLLTVFGSIALILAAIGVYGVISY
                     GVEQRTQEIGIRMALGARHGDVLAMIVRHAAVLAGLGLFLGLGTALALSGLLESLLYQ
                     VSPTDPPTFAVGLVVLSVVAVLAAALPARRAARTDPMVALRNG"
BASE COUNT          443 a          994 c         1014 g          358 t
ORIGIN      
        1 cgaggaccgg aagcgagagc tcgatctcgc ccgcgcgcgg gaggtagagc gccaccagcc
       61 gtccgagcgc gctcgagccc caggcggcca gcagcagtcc gagacccccg ccgagcacgg
      121 ccagcaccag gctctcggtg aggagctggc gcaccaggcg tccgcgactg cttccgaggg
      181 cggtgcggag cgcgatctcc cgctcgcgca ccgtggctcg ggccagcagc aggttagcca
      241 cgttggcgca tccgatgagg agcacgaacc cgaccgcccc gagcagcacc aggagcgccg
      301 gccggacgtc acccacgacc tgctcggcga gcggatgggc gacgggatgc cagccctggg
      361 cggccggata gatctgggga tactgctccc gcagcctggc cgcgagcacc gcgagctccg
      421 cgcgcgcatc ctccaccgtg cggccgggct tgagccggcc gatcaggtcg tacacccgcg
      481 cgttgcggac gttcaggaaa ttggtgtcgg gattgtccag cgcgatgggc gcccagacct
      541 ccatcggcga ggccccgctc tccagcacgt ggcggaatcc gcgtggcatg atcccgatga
      601 tcgtcatcgg atcgtcatcc agccgcaccg tcttcccgat cacgccggga tcgcccccga
      661 accgcttctg ccagagatcg tgcgagatga tgacgacgta gccgatctgc ccccggtcgt
      721 cgtcgggcgt gaaatcgcgg ccgatcgccg gcgccacacc gagcagccgg aagtagttgt
      781 cggagaccac cgacgcctgg atccgctggg gcgcgcccag cgcggtgaga ttgatgctga
      841 tcgggtagac cgcggcgagg tcctccagcg cgctcacgcc ctgcaggtag tcgtggtact
      901 ccggctggga ggccgggatg tcctgggtgc cggtcgccga gtacgcggcc cggaccgaca
      961 tcagccgctc gggatcggcg taggccagcg ggcggagcag gacggagtag accacgctga
     1021 agatcgcggt gttcgcgccg atgccgaggg cgagcgtgag cacggcgatc gcggtgaagg
     1081 cggggcttcg gagcaggctg cgcaccgcga agcgggcgtc gcgccagaac acgtccatca
     1141 tgccacctcc agctcgaccg gcggacgggg cacgatccgg ccgtcgaaga ggaacacgtt
     1201 gcgtcccgcc cgaccgacgt agcgcgggtc gtgagtgacc atcacgatcg tggcgccgcc
     1261 cgcgtgcagc tcctggagga gctccatcac ctgggcgccg ttccgggaat cgagattgcc
     1321 ggtgggctcg tcggccagga ggacgagcgg cttccccgcc accgcccgcg cgaccgcgac
     1381 gcgctgctgc tggccgcccg agagctgcgc gggatagtgg tggatccggt gcagcagccc
     1441 gacccgctcc agcgcctcgt gcaccagcgc ccgccgttcc gcgggcggga gcccccgata
     1501 gcggagcggc agctccacgt tggcgtagac gtcgagatcg ccgatcagat tgaaggcctg
     1561 gaagatgaag ccgatggcgc ggctccggac ccgggcgcgc tgcgccgggg agagcgaggc
     1621 caccggctcg cccgcgagca cgtagctgcc ctcgctgggc gagtcgagca gcccgagcag
     1681 ggagagcagc gtggtcttgc cgcacccgga gggcccgcag atcgcgacga actccccggc
     1741 ccgaatggcg aggctgaccc gggagagggc gtgcgtctcc acctcctccg tgtggaagat
     1801 cttggagatg ccgtccaggc ggatcagggg atcgatcgcg agcgccatgt cagccgttcc
     1861 gcagggccac catcgggtcg gtgcgcgcgg cccgccgcgc ggggagcgcc gcggccagga
     1921 ccgccacgac cgagagcacc accagtccca cggcgaaggt cggcggatcg gtcggactca
     1981 cctggtacaa caggctctcc agcagcccgg agagcgccag cgccgtcccg agcccgagga
     2041 agaggcccag acccgccagc acggcggcgt gccgcacgat catggcgagg acgtcaccgt
     2101 gccgcgcgcc gagggccatg cggatcccga tctcctgagt ccgctgctcc acgccgtagg
     2161 agatgacgcc gtacacgccg atggccgcga ggatcagcgc gatggacccg aagacggtga
     2221 gcagcatggt gctgaaccgc gactgggcga gcgagtccat gactcggccc tgcatggtgc
     2281 ccaggttgta cagcggcagc aaagggtcca cctccgcgac cgcctggcgg agcggggtca
     2341 tgagtgcggg ctcgccggcc cgggcccgca ccgccagcgt cagcgtgcgg tcggtccagg
     2401 tccacgccgc cgccggggcc tggagcatcg gcaggtagaa ctccggcatc ggctcctggt
     2461 ccagccccac cgcgcgggtg tcgcgcgcga cgccgatcac ttccttccag ttcggcgcgc
     2521 cgttcgggcc ggactcgcaa caggcgatcc gcttgccgat cgggtcctgg ccggggaacg
     2581 cctcgcgcgc cagcgtctcg ttgatcacca tcaccagggg ggctccctcg cggtcctgcg
     2641 ccgtgaagcc gcgcccgcgc accagctgga tccgcatggt ctcgaagtag ccgggagtcg
     2701 cgacccgcat cagcgaattg acggcggagc cgatctcgag gggacggccc tcgggcacga
     2761 gtccgttgct gttccctccc tcgagcgggg cggcggagac caacgccgc
//
LOCUS       DASUYN010000244         2239 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1842947, whole genome shotgun sequence.
ACCESSION   DASUYN010000244 DASUYN010000000
VERSION     DASUYN010000244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2239)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2239)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2239
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1842947"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..490
                     /locus_tag="VF061_04845"
     CDS             <1..490
                     /locus_tag="VF061_04845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668859.1"
                     /translation="THLSSRWGTEASVLYTSAELEDELRGDDGTVAGTVRRHPKALEI
                     LGAFRWNAGRMPRLGLEPFARLGYGWSWYGMSNEAEVVTTTGEDAGRIAVNRGPRSRF
                     PLGFLPNSGLIGFGLDLPLTARASESGLRLSYSLLATRRVSGRSELVLQLYTGVLPTP
                     RR"
     gene            complement(508..1872)
                     /locus_tag="VF061_04850"
     CDS             complement(508..1872)
                     /locus_tag="VF061_04850"
                     /EC_number="1.11.1.5"
                     /inference="COORDINATES: protein motif:HMM:NF015131.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c peroxidase"
                     /protein_id="HEX6668860.1"
                     /translation="MRYHALGAICALLLTACADEPPTAAPSTGLPALAETDLAALVAE
                     VRARAVDRGIGPLARPAPVRPELVRLGQALAFDKELSGNRDISCMTCHLPALGTGDGR
                     SLSIGQGATGLGTGRVHPDGAFIPRNAPPLFNLHAIDPFFWDGRVVRDAQGRFLTPAR
                     QRVHPHMTRAFEFGALSALPLCPVLSREEMRGTTGNELAAVSDKEPQQVWNRLMDRLG
                     RIREYRQMFEAAYPGTRFAEMNFGHASNAIAGFLVDRLAFNDSPWDRFLAGNDGALSE
                     VQLRGARNFLTARCSICHNGPALTDNGFHNVAVAQFGPGQGDGASGRDDFGRMRETGR
                     TEDRYAFRTPPLRNVELTAPFGHDGAFSSLREFIAHYSESDLKLRAFDGSGLEPALRP
                     TLLQNFDDILATRDTLLNGVVFPDEVIDEVTEFMLALTDPAARGLGALTPARVPSGLA
                     VDGM"
     gene            complement(1937..>2239)
                     /locus_tag="VF061_04855"
     CDS             complement(1937..>2239)
                     /locus_tag="VF061_04855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668861.1"
                     /translation="LGGGGGRVGRRGHPAPRSRSLGLRILGFQNFDTRIAIGDLRTGS
                     TDRDSQYTVDPDGGSKAAMGPGWDSRPVGDDPVQNHAVALQAGHMSRVAGFFRYTM"
BASE COUNT          322 a          782 c          811 g          324 t
ORIGIN      
        1 cacccacctg tcctcgaggt ggggtaccga ggcctccgtc ctgtatacgt cggcggagct
       61 cgaggacgag ctgcgcggtg atgacggcac ggtcgcaggc accgtccggc ggcaccccaa
      121 ggcactcgag atcctgggtg cgttccgctg gaacgccggg cggatgcccc ggctcgggct
      181 cgagcccttc gcgcggctgg ggtacgggtg gtcctggtac gggatgtcca acgaggccga
      241 ggtcgtgacc acgactggcg aggatgccgg caggatcgcg gtgaaccgcg gaccacgctc
      301 gcgattcccc ctgggcttcc tgccgaactc ggggctgatc gggttcgggc tggatctgcc
      361 gctgacagcg cgggcctcgg agagcgggct tcggctcagc tacagcctgc tggcgaccag
      421 aagggtctcc ggccggtcgg agctggtgct gcagctctat accggggtgt tgccgacgcc
      481 tagacggtag cgcgacgcag cgagtcgcta catcccgtcc accgccagcc cgctcggcac
      541 ccgcgcgggg gtcagcgccc ccaggccccg cgccgccgga tcggtgagcg ccagcatgaa
      601 ctcggtcacc tcgtcgatca cctcgtccgg gaacaccacc ccgttgagca gcgtgtcccg
      661 ggtggccagg atgtcgtcga agttctgcag cagggtgggc cgcagcgccg gctcgagccc
      721 gctcccgtcg aacgcccgca gcttgaggtc cgactcactg tagtgggcga tgaactcccg
      781 caggctcgag aacgccccgt cgtgcccgaa cggcgccgtg agctccacgt tccggagcgg
      841 cggcgtgcga aaggcatagc ggtcctctgt gcggccggtc tcccgcatcc ggccgaagtc
      901 gtcccgtccc gaggcgccgt cgccctggcc cgggccgaac tgcgccacgg ccacgttgtg
      961 gaacccgttg tcggtgagcg ccggcccgtt gtgacagatc gagcagcgcg cggtgaggaa
     1021 gttccgcgcg ccgcggagct gcacctcgct caacgcgccg tcgttcccag cgaggaaacg
     1081 gtcccagggc gagtcgttga acgccagccg gtccaccagg aagccggcga tcgcgttgct
     1141 cgcgtgcccg aagttcatct cggcgaaccg ggtgcccggg taggccgctt cgaacatctg
     1201 ccggtactcc cggatccggc ccagccggtc catgagccgg ttccacacct gctgcggctc
     1261 cttgtcgctc accgccgcga gctcgttgcc ggtggtgccg cgcatctcct cgcgcgagag
     1321 cacggggcag agcggcagcg ccgatagcgc gccgaactcg aaggcgcggg tcatgtgggg
     1381 atgcacccgc tgccgggccg gggtcaggaa gcgcccctgc gcgtctctca ccacccggcc
     1441 gtcccagaag aacggatcga tcgcgtggag gttgaagagc gggggcgcgt tgcgggggat
     1501 gaaggccccg tccggatgca cccggccggt gccgaggccg gtggccccct ggccgatgga
     1561 caggctccgt ccatccccgg taccgagcgc cggaaggtgg caggtcatgc acgagatgtc
     1621 gcggttgccg ctcagctcct tgtcgaaggc gagcgcctgg cccaggcgga ccagctcggg
     1681 ccgcaccggc gccgggcgcg ccagcgggcc gatgccgcgg tcaacggccc gggcccgaac
     1741 ctccgcgacg agcgcggcga gatcggtttc agcgagcgcc ggcaggccgg tggagggcgc
     1801 cgccgtcggg ggctcgtcgg cacaggccgt gagcaggaga gcgcagatgg ctcccaaggc
     1861 gtgatatcgc atatgggtct ccggaggact gcggccggtg cggcggctcg gggggccggc
     1921 aggggggcat cggtcgctac atagtatatc ggaaaaaccc cgcgacccgc gacatgtggc
     1981 ccgcctgcaa cgcaactgca tggttctgca ccgggtcatc gccgacgggt cgcgaatccc
     2041 agccaggccc catcgccgcc ttgctgccgc cgtccgggtc cacggtgtac tgactgtccc
     2101 tgtcggtcga gccggtgcgg agatcgccga tggcgatgcg cgtgtcgaag ttctgaaagc
     2161 cgaggatccg aagcccgaga gatcttgagc gcggcgcggg gtgccccctc cggcctaccc
     2221 gaccgcctcc tccgccgag
//
LOCUS       DASUYN010000245         3190 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_300558, whole genome shotgun sequence.
ACCESSION   DASUYN010000245 DASUYN010000000
VERSION     DASUYN010000245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3190)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3190)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3190
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_300558"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>3190)
                     /locus_tag="VF061_04860"
     CDS             complement(<1..>3190)
                     /locus_tag="VF061_04860"
                     /inference="COORDINATES: protein motif:HMM:NF017930.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucoamylase family protein"
                     /protein_id="HEX6668862.1"
                     /translation="ERLERTFETLARLRRYRGHFYNWYDLTTLEVLEPAYVSTVDSGN
                     LAGHLVALRQALLGLPDQPMYDGRVLRALRAGLSLAADGAGKDAAVTERVRAARGELE
                     GADPMRPAETLARVARALEGSGSEWLEWCRGLAERHGTQVHSLELRQVPRRDLESGVL
                     SERWGDVAARRPEVSAVLDRVRALADHCGAIVEEMDFGFLYDRSRSLFAIGYRAGSPT
                     LDPSYYDLLASEARLASFMAVARDEVPVEHWFRLGRTLTRAAGEMALVSWSGSMFEYL
                     MPALVMRSFPGTVLDDTAHGAVRRQISYAARYGVPWGISESAYNLRDRHHTYQYRAFG
                     VPDLALKRGLGRDLVVAPYASALAALVAPKSAIANLGALEKLGALGPYGFREALDYTR
                     PTSGQPFALVETWMAHHVGMSLVALTNALTGQVWQRRFHADPLVRAAELLLHERVPRR
                     IELQEPQTARAGEALPDPELSRPVVREVDTPDTPSPHIALLGHWPYTAMVSHCGAGYS
                     RFEHLAVTRWRADATRDATGQFCYLRDLAGGRLWSAGHQPVCTEPDWYRAYLATDRVA
                     IHRADGEIETRTQIVAVPADGAEVRRVTVTNTGDDVREVELTSYGEIVLAPPDADRSH
                     PAFGNLFVETEWHDWCTAITATRRPRSAKEPTLWGVHVVDTGPYLVGPVTCETDRARF
                     LGRGRSTRDPAALDFDGPLSGTTGAVLDPVFAIRVRVRLEPRHSAAVAFTTLVAPDRE
                     RAFELADRYHHPYAAQRALDLAWTSAQVDLRELGISAEDAGVFQELAGHLFYANPALR
                     ASSEEQILGQGPQPLLWSIGVSGDWPILLVVIDSEAGLPTLRQLLQAHHYWRRRGMTV
                     DLVILNTRTASYYQDLDQRITAAVHGSPTADVLDRPGGVFHRRRDLLPDDVLAMLRAT
                     ARVQLACDGRSLARLLQAAAPEGESQELDLEPVPSRISGAVEPSILTQIRVRALRGAK
                     TLLDTAASVVLGEEGGEHSLPATRRRGGAAADGAAAAARGGLDNGYGGPNAEGEYEIR
                     IDDDLLPPAPWANVIANPAGGFLVTERGAGCTW"
BASE COUNT          426 a         1195 c         1162 g          407 t
ORIGIN      
        1 cccaggtgca tcccgcgccc cgctccgtca ccaggaaccc gccggccgga ttggcgatca
       61 cgttcgccca cggggccggc ggcagcaggt cgtcgtcgat ccggatctcg tactccccct
      121 ccgcgttcgg cccgccgtag ccgttatcga gcccgccgcg cgccgcggcg gcggcgccgt
      181 ccgccgccgc accgccccgc cgccgcgtgg ccggcagcga atgctccccc ccttcctctc
      241 ccaggaccac cgaggccgcg gtgtcgagca gggtcttcgc cccgcgcagc gcgcgcaccc
      301 ggatctgggt caggatgctc ggctcgaccg cgcccgagat gcgcgacggg accggctcca
      361 ggtccagctc ctgcgactcg ccctccggcg ccgccgcctg cagcaggcgc gcgagcgagc
      421 gcccgtcgca ggcgagctgc acccgggcgg tggcgcgcag catggccagc acatcgtcgg
      481 gcagcaggtc gcgccgccgg tggaacacgc cgcccggccg gtcgagcacg tcggcggtgg
      541 gcgatccgtg caccgccgcc gtgatccgct gatccaggtc ctggtagtag ctggcggtcc
      601 gggtattgag gatcacgaga tcgaccgtca ttccgcggcg ccgccagtag tggtgcgcct
      661 gcagcagctg gcgcagcgtc ggcaggccgg cttccgagtc gatcacgacg aggagaatcg
      721 gccagtcgcc ggagacgccg atggaccaga gcagcggctg gggcccctgc cccaggatct
      781 gctcctcgga ggacgcgcgg agcgccggat tggcgtagaa caggtgcccc gccagctcct
      841 ggaacacgcc cgcgtcctcg gcgctgatgc cgagctcgcg gaggtccacc tgcgccgagg
      901 tccaggcgag gtcgagcgcg cgctgcgcgg cgtaggggtg gtggtagcgg tcggccagct
      961 cgaaggcccg ctcccggtcg ggcgcgacca gcgtggtgaa cgcgaccgcc gccgagtggc
     1021 gcggctccag ccgcacccgc acccggatgg cgaacaccgg gtcgagcacc gccccggtcg
     1081 tgccggagag cgggccgtcg aagtcgagcg ccgccggatc gcgggtcgag cggccccggc
     1141 ccaggaaacg agcgcgatcg gtctcgcagg tcaccggtcc caccaggtac gggcccgtgt
     1201 ccaccacatg gacgccccag agcgtcggct ccttcgccga gcggggccgg cgggtggcgg
     1261 tgatggcggt acaccagtcg tgccactcgg tctcgacgaa caggttgccg aacgcggggt
     1321 gggaccggtc cgcatccggc ggcgccagca cgatctcccc atagctggtg agctcgacct
     1381 cgcgcacgtc gtcgccggtg ttggtcaccg tgacccggcg cacctcggcc ccgtcggccg
     1441 gcaccgcgac gatctgggtg cgggtctcga tctcgccgtc ggcgcggtga atcgcgacgc
     1501 ggtcggtcgc cagatacgcg cggtaccagt cgggctcggt gcagaccggc tggtgccccg
     1561 ccgaccacag ccggccgccg gccaggtcgc gcaggtagca gaactggccg gtggcatccc
     1621 gggtggcgtc ggcccgccag cgcgtcaccg ccaggtgctc gaagcggctg tagcccgccc
     1681 cgcagtggct caccatcgcc gtatagggcc agtggcccag cagcgcgatg tggggcgacg
     1741 gggtgtcggg cgtgtccacc tcgcgcacca ccgggcggct cagctcggga tcgggcaggg
     1801 cctcgccggc gcgcgcggtc tgcggctcct gcagctcgat ccggcgcggc acccgctcgt
     1861 gcagcagcag ctccgccgcg cgcacgagcg ggtcggcgtg gaagcgtcgt tgccagacct
     1921 gtcccgtcag cgcgttggtg agcgccacga ggctcatgcc gacgtggtgg gccatccagg
     1981 tctccaccag cgcgaacggt tgccccgacg tcgggcgggt gtagtccagc gcctcgcgga
     2041 agccgtaggg gcccagcgcg cccagcttct ccagcgcacc gagattggcg atggcgctct
     2101 tgggcgccac cagcgccgcg agcgccgagg cgtacggcgc gacgacgaga tcgcgaccca
     2161 gcccgcgctt gagggcgagg tcgggcaccc cgaatgcccg gtactgatag gtgtggtgcc
     2221 ggtcgcgcag gttgtaggcg ctctcgctga tgccccacgg gacaccgtac ctggcggcat
     2281 aggagatctg ccgccgcacg gcgccgtggg cggtgtcgtc gagcacggtg cccgggaagg
     2341 agcgcatcac cagcgcgggc atcaggtact cgaacatgct cccgctccac gacaccagcg
     2401 ccatctcgcc ggcggcgcgc gtgagggtgc gcccgagacg gaaccagtgc tccaccggca
     2461 cctcgtcccg ggccaccgcc atgaagctcg cgagccgcgc ctcggaggcg aggaggtcgt
     2521 agtacgatgg gtccagtgtg ggggatcccg cccggtagcc gatcgcgaag aggctgcggc
     2581 tgcggtcgta gaggaagccg aagtccatct cctcgacgat ggcgccgcag tggtccgcga
     2641 gcgcgcggac ccggtcgagg acggcgctga cctcgggccg ccgcgcggcc acgtcgcccc
     2701 agcgctccga gagcaccccg ctctccaggt cgcggcgcgg cacctgcctg agctccaggc
     2761 tgtgcacctg ggtcccatgc cgctcggcga gcccgcggca ccactcgagc cactcggagc
     2821 cggagccctc gagcgcccgg gcgacccggg ccagcgtctc ggcgggacgc atcggatcgg
     2881 ccccctccag ctcgccccgc gcggcgcgga cgcgctcggt cacggccgcg tccttcccgg
     2941 cgccgtccgc cgcgagcgag agacccgccc tcagtgcccg tagcacccgc ccgtcgtaca
     3001 tcggctgatc cggcagcccg agcagcgcct gccggagggc gacgagatgc ccggcgaggt
     3061 tgccgctgtc caccgtggag acgtaggccg gctccagcac ctccagcgtg gtcaggtcgt
     3121 accagttgta gaagtgtccc cggtaccgcc ggagccgtgc cagggtctcg aaggtccgct
     3181 ccagccgctc
//
LOCUS       DASUYN010000246         5872 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1843794, whole genome shotgun sequence.
ACCESSION   DASUYN010000246 DASUYN010000000
VERSION     DASUYN010000246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5872)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5872)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5872
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1843794"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..805
                     /locus_tag="VF061_04865"
     CDS             <1..805
                     /locus_tag="VF061_04865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HEX6668863.1"
                     /translation="VFRVIPSSVPSADAMGLSRDVQNLCYLTKGLVVVTGPTGSGKST
                     TLAALVDLMNRTRTDHIITIEDPIEFVHQSKQCLVTQRQVGVHTRSFKHALRAALRED
                     PDVILVGEMRDLETVSIAIETAETGHLVFGTLHTTTAASTVDRIIDQFPADRQSQVRV
                     MLSESLRGVIAQTLCRKIGGGRIAAREILLTTPAVSNLIREGKTFQIPSIMQTSRKAG
                     MVTLNDALMELVDTRQVEPKEAYMKSVEKAGFAAALKAKRHDTSFLGEG"
     gene            802..1590
                     /locus_tag="VF061_04870"
     CDS             802..1590
                     /locus_tag="VF061_04870"
                     /inference="COORDINATES: protein motif:HMM:NF012797.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrmH family RNA methyltransferase"
                     /protein_id="HEX6668864.1"
                     /translation="MTVETAGRASPPILVLVNPQDLVNIAAAVRIARNFRIERMRLVN
                     PETFDPWRIEGIAHNSAAFVAGIEIVDSLEAAVADCVHVAVLTARGRTAKRRTVRPRE
                     AAAELLARAPEGPVAMVFGREDRGLTNAEIDLGHVLVTIPTDPQSSSLNLAQAVAIMS
                     YEIWLLRGGERQPLKRPRKDTAPATSAQLEELFADWRRALWAVDFFKTRRSESVMRSF
                     REILHRAGLDGREASLVRAMGIEVVRYLERAGIAVEAPPVADPS"
     gene            1593..2114
                     /locus_tag="VF061_04875"
     CDS             1593..2114
                     /locus_tag="VF061_04875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3788 family protein"
                     /protein_id="HEX6668865.1"
                     /translation="MARSSAYWSANRYPDPDVQPDPAAPLQDLPAQAAARFKAVRTGL
                     LAIRGVVETVRYMGVSWRWSWEYGIGSRKLCWVHVVGNGISTTFTLSDMEESRVRSIP
                     RLSADVARAVAESQRTGPVRWCWLELGDRRVVEGFLTFARRKGEWLNERPAPHRAGRS
                     RGSAAKDPDAEAE"
     gene            2277..2864
                     /locus_tag="VF061_04880"
     CDS             2277..2864
                     /locus_tag="VF061_04880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HEX6668866.1"
                     /translation="MRTLAIVLGGVGAGGLAAVLAFSGPSPQAQQAAAPPDSITAPVI
                     SDTGALRGPRQPIFFRHDIHAGQFKIQCQYCHYSVNVSPEPGIPTMQTCMGCHLIVAG
                     SDTNSKVEIQKLRQAWNEKKPVEWVRVHFLPRHAHFPHQRHVKVLGPTACATCHGDVS
                     RMPQVFKVQQVDNMGYCINCHLQRGVSRDCTVCHY"
     gene            2958..>5872
                     /locus_tag="VF061_04885"
     CDS             2958..>5872
                     /locus_tag="VF061_04885"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEX6668867.1"
                     /translation="MSDDQQPSSLDRRRFLTVLGVSAGGGALALSGCSTDRVQKLVPY
                     LVQSEDQVPGLATWYASTCTECSSGCGVHVRTREGRAVKLEGNPDHPVNRGKLCSRGQ
                     ASLQGLYNPGRIRAPMARAADGSFAEITWDDAIGRLAGKVNEAAGRIAVISGAPRGTF
                     SDLLVEWTAALGGRLVRHESFDLEPVRAANRQVFGLDQVPAHDFGRARYIVSFGADFL
                     DSWGSLVENQLGFARSHGFAEGGVAKFVYAAPRRDLTGLNADEWLPIKPGSEAALALA
                     MAQVLVTEQGDRHGLASALSAYSPAMAARETGLPAERIERLAREFAAARPSLAVAGGV
                     GSQHAAATEVCAAVNVLNFVAGNIGETVRFGADLSVGDGHAELARLAQAMDGGEVQVV
                     LVHDANPAYTLPKASGFAARFAKVGFKVSTSMYLDETAALCDLLLPQHHALERWDDAR
                     PRAGVHGLMQPVMEPVFNTLPAGEILLRVGRKAAGAVAKFTAPSWDEHLKARWQALAG
                     ELGEADPAAFWHAAVQRGGVYRDPPAPPQVALVLDAGKLTYTPPTFEGDGSFTFLTYP
                     HPMLYDGRGANKPWLMENADPVTKITWHSWVEVSPTAARALDVRDGEIVELTSPYGAV
                     EAPVYVYPGIRDDAVAIPLGFGHSAYGPIAQGRGVNALDLLGAPRGDFVPYLSTRVTL
                     RKTGGYRKLASVAGVPRQLGRGIGESVSLAAAQKGLTVEQAYAEEGHGKHEINTEREL
                     EAIHGWSEAQQRATERGDYARDLPLWGMSIDLAKCTGCTACVTACYAENNIPAVGESE
                     ILRGREMTWMRIERYWDDGEGHEAASPRFVPMLCQHCANAPCEPVCPVYAAYHTADGL
                     NGQVYNRCVGTRYCANNCPYKVRYFNWYKYNEQAWPAPLHLQLNPDVTVRARGVMEKC
                     TFCVQRIRGAQNQARLEDRPLRDGDVVTACAQACPSDCIVFGDVNDPASRVTRIAQNP
                     "
BASE COUNT          877 a         2050 c         2107 g          838 t
ORIGIN      
        1 ggtcttccgg gtcatcccca gctccgtgcc gtccgcggac gcgatggggc tgagccggga
       61 cgtgcagaac ctctgctacc tgaccaaggg cctggtggtg gtcaccggcc cgaccggctc
      121 cggcaagagc accacgctcg cggcactcgt ggacctgatg aaccgcaccc ggaccgatca
      181 catcatcacg atcgaggacc ccatcgagtt cgtccaccag agcaagcagt gcctggtgac
      241 gcagcggcag gtgggcgtgc atacccggtc gttcaagcac gccctgcgcg cggcgctccg
      301 ggaggatccc gacgtgatcc tggtcggcga gatgcgggac ctggagaccg tctccatcgc
      361 gatcgagacg gcggagacgg gacacctggt gttcgggacg ctgcacacga cgacggctgc
      421 ttccacggtg gaccggatca tcgaccagtt cccggcggac cgtcagtccc aggttcgggt
      481 gatgctctcg gagtcgctgc gcggcgtgat cgcccagacg ctgtgccgca agatcggcgg
      541 ggggcggatc gcggcgcggg agatcctgct caccacgccc gcggtgagca acctgatccg
      601 cgaaggcaag accttccaga tcccctccat catgcagacc agcaggaagg cggggatggt
      661 cacgctgaac gacgccctga tggagctggt ggacacccgg caggtggagc cgaaggaagc
      721 ctacatgaag tcggtggaga aggccgggtt cgcggcggcg ctcaaggcga agcggcacga
      781 cacgagcttt ctgggcgagg ggtgacggtc gagacggcgg gacgagcgtc ccccccgatc
      841 ctggttctcg tcaatcccca ggatctcgtc aacatcgcgg cggcggtccg catcgcccgg
      901 aacttcagga tcgagcggat gcggctggtg aatcccgaga ccttcgatcc ctggcggatc
      961 gaggggatcg cgcacaacag cgccgccttc gtggccggca tcgagatcgt ggactcgctc
     1021 gaggcggcgg tcgccgactg tgtccatgtc gcggtcctga ccgcccgggg gcggacggcg
     1081 aagcgacgca cggtccggcc gcgggaggcc gccgccgagc tcctggcgcg cgcgccggag
     1141 ggcccggtgg cgatggtctt cgggcgggag gaccgggggc tcaccaacgc cgagatcgac
     1201 ctgggtcatg tgctggtgac cattcccacc gatccgcaga gctcttccct caacctggcc
     1261 caggcggtgg cgatcatgtc ctacgagatc tggctcctgc ggggcggtga gcgccaaccg
     1321 ctcaagcggc cccgcaagga caccgcgccg gccacctccg cccagctgga ggagctcttc
     1381 gccgactggc ggcgggcgct ctgggcggtg gacttcttca agacccgtcg gtcggagagc
     1441 gtgatgcggt cgttccggga gatcctgcac cgggccgggc tggatggccg ggaggcctcg
     1501 ctggtccgcg cgatgggcat cgaggtcgtg cgctacctgg agcgggccgg catcgcggtc
     1561 gaagcgccgc ccgtggccga cccctcgtga gcatggcccg ctccagcgcc tactggtccg
     1621 ccaatcgata cccggacccc gacgtccagc cggatcccgc ggcgccgctt caggaccttc
     1681 cggcgcaggc ggcggcccgg ttcaaggcgg tccgcacggg gctgctcgcg atccgggggg
     1741 tcgtggagac ggtccgctac atgggcgtga gctggcggtg gagctgggag tacggcatcg
     1801 gcagccggaa gctctgctgg gtgcacgtgg tcgggaacgg catctcgacc accttcaccc
     1861 tgagcgacat ggaggagagc cgggtgcgct cgattccccg gctgtccgcc gacgtggcga
     1921 gggccgtggc cgaatcccag cgcaccggtc cggtgcgctg gtgctggctg gagctcggcg
     1981 accggcgggt ggtggagggc ttcctcacct tcgcccggcg gaagggcgag tggctcaacg
     2041 agcggccggc gccgcatcgg gccggccggt cgcgcggttc ggcggcgaag gatcccgatg
     2101 cggaggccga atgacccgcc ggaatcgtcc ggggatcggg ttgtgccgcg cgaggtctgg
     2161 actatgtttc ggcgcgcggg atacccggtg agcgtcttca acgagcccgg ccgtggtggt
     2221 gatgtggcgg cgctgatcgc cctccggcgg gtctctccct cagcgtggga tcgatgatgc
     2281 gaacgttggc aatcgtgctc ggcggcgtcg gggccggcgg actcgccgcc gtgctggcgt
     2341 tctcgggccc gagcccgcag gcccagcagg ccgccgctcc acccgactcg atcacggcgc
     2401 cggtcatcag cgacaccggc gcgctcaggg gcccccgcca gcccatcttc ttccggcacg
     2461 acatccacgc cggacagttc aagatccagt gccagtactg ccactactcg gtgaatgtct
     2521 cgcccgagcc ggggatcccc accatgcaga cctgcatggg gtgccacctc atcgtggccg
     2581 ggagcgacac caacagcaag gtcgagatcc agaagctgcg gcaggcctgg aacgagaaga
     2641 agccggtgga gtgggtccgg gtgcacttcc tgccccggca cgcccacttc ccccaccagc
     2701 gacacgtcaa ggtgctcggc ccgacggcct gcgccacctg tcacggcgac gtgagccgca
     2761 tgccgcaggt gttcaaggtg cagcaggtgg acaacatggg ctactgcatc aactgccacc
     2821 tccagcgcgg ggtctcgcgg gactgcaccg tatgccacta ctgacccggc ctgtcatcct
     2881 gagcggagcg aaggaggcga cgccaggatg tccccttcac tccgttcagg gtgacatgtc
     2941 gacacctgga agcccgcatg tctgacgacc aacagccctc ctccctcgac cgccgccggt
     3001 tcctcacggt cctcggagtc tcggccggcg gcggagctct ggcgctcagc ggctgcagca
     3061 ccgatcgggt ccagaagctg gtgccctatc tggtgcagtc ggaggaccag gttcccggcc
     3121 tggccacctg gtacgcgagc acctgcaccg aatgctccag cggctgtggc gtccacgtgc
     3181 ggacccggga gggccgcgcg gtcaagctgg agggcaaccc cgaccatccg gtcaaccggg
     3241 gcaagctctg ctcccggggg caggcgtcgc tccagggcct ctacaacccc gggcggatcc
     3301 gcgcgcccat ggcgcgcgca gccgacggca gcttcgccga gatcacctgg gacgacgcga
     3361 tcgggcggct ggcgggcaag gtcaacgagg ccgccggcag gatcgcggtc atcagcggtg
     3421 ccccccgcgg cacgttctcc gacctgctgg tggagtggac cgcggcgctg ggcggacggc
     3481 tggtgcggca cgagagcttc gacctcgagc cggtccgcgc cgccaatcgc caggtattcg
     3541 gcctcgatca ggtgccggcg cacgacttcg gccgggcccg gtacatcgtc tccttcggcg
     3601 cggacttcct ggacagttgg gggtcgctgg tcgagaacca gctcggcttc gcccgttccc
     3661 acgggttcgc cgagggcggg gtcgcgaagt tcgtctatgc cgcgccgcgc cgcgacctga
     3721 ccggcctcaa cgcggacgag tggctcccga tcaagccggg ctccgaggcg gcgctcgcgc
     3781 tcgcgatggc acaggtgctg gtgaccgagc agggcgaccg tcacggtctc gcgtcggcgc
     3841 tctccgccta ctcgccggcg atggcggccc gggaaaccgg tctcccggcg gagcggatcg
     3901 agcgcctggc ccgcgagttc gccgcggcgc ggccgagcct cgccgtcgcc gggggcgtgg
     3961 ggtcgcagca cgcggcggcc accgaggtct gcgccgcggt caacgtcctc aacttcgtcg
     4021 ccggcaacat cggggagacc gtgcgcttcg gcgccgacct ctccgtgggc gatggccacg
     4081 cggagctggc gcggctggcc caggcgatgg acgggggcga agtccaggtg gtcctggtcc
     4141 acgatgccaa cccggcgtac acgctgccca aggccagcgg cttcgccgcc cggttcgcca
     4201 aggtgggctt caaggtgtcc acctccatgt atctcgacga gacggccgcg ctctgcgacc
     4261 tgctgttgcc gcagcaccac gccctcgagc gctgggacga cgcccggccc cgcgccggcg
     4321 ttcacgggct gatgcagccg gtgatggagc cggtgttcaa cacgctgccc gcgggcgaga
     4381 tcctgctgcg ggtgggccga aaggcggccg gggcggtggc gaagttcacc gcgccgagct
     4441 gggacgagca cctcaaggcc cgctggcagg cgctggccgg ggagctgggc gaggccgacc
     4501 cggccgcgtt ctggcacgcc gcggtgcagc ggggcggggt gtatcgcgac ccgccggcgc
     4561 cgccccaggt cgcgctggtc ctcgacgccg ggaagctcac ctacaccccg ccgacgttcg
     4621 agggcgacgg gagcttcacc ttcctgacct atccccaccc catgctgtac gacggtcgcg
     4681 gggcgaacaa gccgtggctg atggagaacg ccgatccggt caccaagatc acctggcatt
     4741 cctgggtgga ggtgagtccg accgcggccc gcgccctgga cgtgcgcgac ggggagatcg
     4801 tggagctgac ctcgccctac ggcgcggtcg aggcgccggt gtacgtctac cccggcatcc
     4861 gcgacgatgc ggtggcgatt ccgctgggct tcggccactc cgcctacggc ccgatcgccc
     4921 aggggcgggg ggtgaacgcg ctcgatctgc tcggcgcccc ccgcggcgac ttcgtgccct
     4981 atctgtccac ccgcgtgacc ctgcggaaga ccggcggcta ccggaagctc gccagcgtgg
     5041 cgggtgtgcc ccgccagctc ggccgcggca tcggggagtc ggtttccctg gcggcggcgc
     5101 agaaaggcct gaccgtcgag caggcctacg ccgaggaggg gcacggcaag cacgagatca
     5161 ataccgagcg cgagctggag gcgatccacg gctggtccga ggcgcagcag cgggccaccg
     5221 agcgcggcga ctatgcccga gacctccccc tgtggggcat gtccatcgac ctcgccaagt
     5281 gcaccgggtg caccgcctgc gtcacggcgt gctacgccga gaacaacatc ccggcggtgg
     5341 gcgagtccga gatcctccgc ggccgggaga tgacctggat gcgcatcgag cgctactggg
     5401 acgatggcga ggggcacgag gcggcctcac cccggttcgt gccgatgctg tgccagcact
     5461 gcgccaacgc gccctgcgag ccggtctgcc ccgtgtacgc ggcctatcac accgcggacg
     5521 ggctcaacgg ccaggtctac aaccgctgcg tcggcacccg ctactgcgcc aacaactgcc
     5581 cgtacaaggt gcgctacttc aactggtaca agtacaacga gcaggcgtgg ccggcgccgc
     5641 tgcacctgca gctcaacccc gacgtgacgg tgcgggcccg cggcgtgatg gagaagtgca
     5701 ccttctgcgt gcagcggatc cgcggagccc agaaccaggc ccggctggaa gaccggccgc
     5761 tgcgcgacgg cgacgtcgtc accgcctgcg cccaggcctg cccgtccgac tgcatcgtgt
     5821 tcggcgacgt gaacgatccg gccagccggg tcacgcggat cgcgcagaac cc
//
LOCUS       DASUYN010000247         2909 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1623447, whole genome shotgun sequence.
ACCESSION   DASUYN010000247 DASUYN010000000
VERSION     DASUYN010000247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2909)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2909)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2909
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1623447"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            55..1395
                     /gene="hemN"
                     /locus_tag="VF061_04890"
     CDS             55..1395
                     /gene="hemN"
                     /locus_tag="VF061_04890"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051989 - coproporphyrinogen dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HEX6668868.1"
                     /translation="MELRPDLLAKYAQPAPRYTSYPPIPAWSRGIGPSDYQSALAAAG
                     SGAEPISLYVHLPFCPRRCLYCGCNVVITRQREKLDRYLDRLGGELDLVGALLGSGRS
                     VTQLHLGGGTPNYLDAAQLERLWQAILHHFTIAPGADLSIEADPRLATPEQFARLRAL
                     GFRRVSSGIQDLDPHVQRAIGRLQPEDLVRRAVEGAREAGFDGINVDLIHGLPEQTPE
                     RFRRTIAGVLRLAPDRVACFGYAHVPDIQRHQLALERYHLPETLERFSLFRLAVQGFT
                     AAGYDWIGLDHFSRQDDTLAAAWRDGRLHRNFNGYTTMPADHLIGLGMSAIGETAGLL
                     VQNVNEHQAWEEAIAGGRFATARGHVLTPDDRRRRAAILSLMCRLELPLELAEGLETE
                     LERLLAFGEDGLVERRSHAVIVTPMGRYFLRTLCTAFDAYLPRTGEARPMSRAV"
     gene            complement(1408..2040)
                     /locus_tag="VF061_04895"
     CDS             complement(1408..2040)
                     /locus_tag="VF061_04895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668869.1"
                     /translation="MMQPATLPDISRTDDPSVVTPPVTITPVSLRQSSALRAALPGLA
                     LAVFTVLLGFGLGGLFGLNEDIIKRRLAASASAVTATVYQGDAAAAEPVLAKSWEYMQ
                     RAHLHGGAIGTAAVGLILVLLMIGATPRAVRVLGIALGAGGLGYSAFWLWAGFIAPGL
                     GSTGAAKESLRWLAMPSSGAVMLATAAVAFLCVRATLRGHGDDADPIRSV"
     gene            2219..>2909
                     /locus_tag="VF061_04900"
     CDS             2219..>2909
                     /locus_tag="VF061_04900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668870.1"
                     /translation="MTAAPPFRLPGIHFAGAVAWLVAGGAGLVAIAPDLAAVRFLHPR
                     VFAVTHLYTLGVILASIFGALYQFYPMSLGAGARSIRVGVAGAWILHAGVGVTVVGFW
                     LWSPVLQAAGWLLLFVAVGCVSWNLLPRRRQMDQGRRAAAYVSAAHSMLGFAMFIAAA
                     RIGESLGWWAFDRLGAIAAHFHLAAFGFAGLTAVGVGGRMLPMLMVSGAAPEWPMRAI
                     GPLGSTGLIALA"
BASE COUNT          407 a         1016 c         1020 g          466 t
ORIGIN      
        1 catcttcatt cgattctccc tacttcttca tggtggcggg tctatgtaga aggcatggaa
       61 ctccgccccg acctgctggc gaagtacgcc caaccggccc ctcgctacac cagctatccg
      121 cccatcccgg cctggagccg cggcatcggg ccgtccgact accagtcggc gctcgcggcg
      181 gccgggagcg gggccgagcc catctcgctc tatgtccatc ttccgttctg tccccgacgc
      241 tgcctgtact gcggctgcaa cgtcgtgatc acccgacagc gggagaagct ggaccgctac
      301 ctcgaccggc tcggcgggga gctggacctg gtgggcgccc tcctgggatc gggacggtcg
      361 gtcacccagc tccacctcgg cggcggcacg ccgaactacc tggacgccgc gcagctggag
      421 cggctgtggc aggccatcct ccatcatttc accatcgccc cgggcgccga cctctccatc
      481 gaggccgacc cccgacttgc cactcccgag cagttcgcac gcctgcgggc cctggggttc
      541 cggcgggtga gttccgggat ccaggatctc gacccccatg tccagcgggc gatcggcagg
      601 cttcagcctg aggacctggt ccgccgcgcc gtcgagggcg cgcgcgaggc gggcttcgac
      661 gggatcaatg tggacctcat ccacggactg ccggagcaga cgccggagcg ctttcgccgg
      721 acgatcgcgg gtgtgctgag actcgcgccg gaccgagtgg catgcttcgg ctacgcccac
      781 gtgccggaca tccagcgcca ccagctggct ttagagcggt accatctccc cgagacgctg
      841 gagcgcttct cgctcttccg cctggccgtc cagggcttca ccgcggcggg gtacgactgg
      901 atcggcctgg atcacttctc ccgacaggac gacacgctgg cggccgcgtg gagggacggc
      961 cggctccaca ggaacttcaa cggatacacc acgatgcccg ccgaccacct gatcgggctg
     1021 gggatgagcg ccatcggcga gacggcgggc ctgctggtgc agaacgtcaa cgagcaccag
     1081 gcctgggagg aggcgatcgc gggtgggcgc ttcgcgaccg cgcgggggca tgtgttgacg
     1141 ccggacgacc ggcgccggcg ggccgccatc ctgagtctga tgtgccggct ggagctgccg
     1201 ctcgagctgg cggaagggtt ggagaccgag ctggagcggc tgctcgcgtt cggggaggat
     1261 ggactggtcg agcgccggag ccacgcggtc attgtgacgc cgatgggccg gtacttcctc
     1321 cgcaccctct gcaccgcctt cgacgcctac ctgcccagga cgggggaagc gcgtcccatg
     1381 tcccgggcgg tgtgacaatc ccccgggtca aacgcttcgg atcgggtcag cgtcgtcgcc
     1441 gtgcccccgc agggtggcgc ggacgcacag gaatgccacg gcggccgtcg ccagcatgac
     1501 ggcgccggag gaaggcatcg cgagccatcg cagcgactct ttcgcggctc cggtgctgcc
     1561 gagtccggga gcgatgaacc cggcccacag ccagaaggcc gagtagccca gcccacccgc
     1621 gcccagggcg atgccgagca cccgcaccgc acggggcgtc gctccgatca tgagcagcac
     1681 gaggatcagg ccgacggcag cggtcccgat ggcgccgccg tgcaggtggg cccgctgcat
     1741 gtattcccac gatttggcga gcaccggctc ggccgcggcg gcatcgccct ggtacaccgt
     1801 ggcggtgacg gcggacgccg aggcggcgag ccggcgcttg atgatgtcct cattgagtcc
     1861 gaacagcccg cccaggccga acccgaggag gacagtgaac acagcaagcg caagcccggg
     1921 gagcgcggcc cgcagcgcgc tcgactgtcg cagggaaacc ggggtgatcg tcaccggcgg
     1981 tgtcacgacg gagggatcgt cggtgcgaga gatgtcgggc aatgtggccg gctgcatcat
     2041 cgggtcctcc ctggtatggt cccctatcgc ggcgctgtat ccgcgcgacg ggtagcgtac
     2101 aggcgcgaca cgcctcatga tgctgaagct attggccggt gatgatggca ggatgaaatt
     2161 caggtgaaac gatgcccgga ggcttcccga cgagcaggat catccccagc ctggattcgt
     2221 gaccgccgcc ccgccctttc gcctgcccgg catccacttc gccggcgccg tcgcgtggct
     2281 ggtggccggc ggcgcgggcc tggtggccat tgcgcccgat ctcgcggcgg tgcgcttcct
     2341 ccaccccagg gtattcgccg tcactcacct gtatacgctc ggcgtcatcc tcgcctccat
     2401 cttcggcgcc ttgtaccagt tctatcccat gtccctcggt gccggagcac ggagcatccg
     2461 tgtcggcgtg gccggcgcct ggatcctgca cgcgggcgtc ggcgtgacgg tggtgggatt
     2521 ctggctctgg tcgccggtgc tgcaggcggc ggggtggctg ctgctcttcg tggccgtcgg
     2581 ctgcgtctcc tggaacctgc tgccgcgccg ccgccagatg gaccagggcc gccgcgcggc
     2641 ggcctacgtc tccgcagcgc attccatgct ggggttcgcg atgttcatcg ccgcggcacg
     2701 catcggcgag tcgctcggct ggtgggcctt cgatcgcctg ggggccatcg cggcccactt
     2761 ccacctcgcc gccttcgggt tcgcgggcct gacggcggtg ggtgtcggcg gacggatgct
     2821 gccgatgctc atggtgtcgg gagccgcgcc ggagtggccg atgcgggcca tcggcccgct
     2881 cggcagcacg ggcctgatcg cgctcgcgg
//
LOCUS       DASUYN010000248         2209 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1623663, whole genome shotgun sequence.
ACCESSION   DASUYN010000248 DASUYN010000000
VERSION     DASUYN010000248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2209)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2209)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2209
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1623663"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2209
                     /locus_tag="VF061_04905"
     CDS             <1..>2209
                     /locus_tag="VF061_04905"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12-dependent ribonucleotide reductase"
                     /protein_id="HEX6668871.1"
                     /translation="MPNSPTLMNAGRPLGQLSACFVLPVDDALSNGKSGIYDTLRAMA
                     LVHQSGGGTGFSFSRLRPKNDIVRSTMGVASGPVSFMSLFDASTDVVKQGGTRRGANM
                     GILRVDHPDIMEFVTCKDDTTKITNFNISVAVTDAFMAAVEQDRPYDLIHPKTGKVTG
                     QLRARAVWEKIIHGAWKTGEPGVFFVDKANYYNPVPHLGNYEATNPCGEQPLLPYDVC
                     NLGSINLGAFVKVSPRAERAVDWDALRRVIQVSTRFLENVIDANQYPLDDITDLAQHI
                     RRIGLGVMGLADLFVRLGIPYDSDEGVELGRKIQQFVDEEAKLESERLAEIRGTFPEW
                     AESIWGPDESAARGPEGERIRPMRKLRNCNVTTVAPTGTISIIANCSSGIEPLFAVAF
                     MRNQAGVLMPDVNEDFVAVAKKEGWYSDDLMRRIAEAGHIDFPEVPEKWRRVFVTANH
                     IKPEWHIRMQAAFQEYNDSAISKTCNFAHDATEAYVEEIYRLAYKLNCKGVTVYRDGS
                     RDMQVLSTGSTAKKVHEQATSSGKAEARADLAAATRANADLHGELAELRAENQRLRKL
                     MMDLEAENLQRRQKRSRPELLRGTTRRVETPLGTLYVNITEDDKGQPFEVFMSLGKAG
                     GALMADVEALGRLISLALRSGIPMREVWRQLRGISSDRVIGLGPNKVLSVPDAVGIAI
                     ERWMLEKQGIQQELLPGSTPPNGVPAVDVAPVVAPAQAGEGSGGEQIVFGGLQE"
BASE COUNT          386 a          716 c          805 g          302 t
ORIGIN      
        1 atgccgaact cgcccaccct gatgaacgcc ggccggcccc tcggccagct ctccgcctgc
       61 ttcgtgctgc cggtggacga cgcgctctcc aacggcaaga gcgggatcta cgacaccctg
      121 cgggcgatgg cgctggtcca ccagtcgggc ggcggcaccg ggttcagctt ctcccggctc
      181 cggcccaaga acgacatcgt gcgctccacc atgggcgtgg cctccggccc ggtgtcgttc
      241 atgagcctgt tcgacgcctc gaccgacgtg gtgaagcagg gcggcacccg ccggggcgcc
      301 aacatgggca tcctgcgggt ggatcatccg gacatcatgg agttcgtcac ctgcaaggac
      361 gacacgacca agatcaccaa cttcaacatc tcggtcgcgg tgacggacgc gttcatggcg
      421 gcggtggagc aggaccggcc ctacgacctg atccatccca agaccggcaa ggtgaccggg
      481 cagctccgcg cccgcgccgt gtgggagaag atcatccacg gcgcctggaa gacgggcgag
      541 ccgggcgtgt tcttcgtgga caaggccaac tactacaatc cggtcccgca cctcggcaat
      601 tacgaggcga ccaacccctg cggcgagcaa cccctcctcc cctacgacgt ctgcaacctc
      661 ggctccatca acctcggcgc gttcgtcaaa gtgtcacccc gagcggagcg agcggtggac
      721 tgggacgccc tccgccgcgt catccaggtc tcgacccgtt tcctcgagaa cgtgatcgac
      781 gccaaccagt acccgctcga cgacatcacc gacctggccc agcacatccg ccgcatcggg
      841 ctcggcgtca tgggcctggc cgacctcttc gtccgcctcg gcatccccta cgactccgac
      901 gagggcgtcg agctgggccg gaagatccag cagttcgtgg acgaggaggc caagctcgag
      961 tcggagcggc tggcggagat ccgcggcacc ttcccggagt gggccgagag catctggggg
     1021 ccggacgaga gcgcggcgcg ggggccggag ggcgagcgga tccggccgat gcggaagctc
     1081 cggaactgca acgtcaccac cgtcgcgccg acggggacga tctccatcat cgccaactgc
     1141 agctcgggca tcgagccgct gttcgcggtg gcgttcatgc ggaaccaggc cggcgtgttg
     1201 atgccggacg tgaacgagga cttcgtcgcc gtcgcgaaga aggagggctg gtactccgac
     1261 gacctgatgc ggcggatcgc ggaggcgggg cacatcgact tcccggaggt gccggagaag
     1321 tggcgccggg tgttcgtgac cgcgaaccac atcaagccgg agtggcacat ccggatgcag
     1381 gcggcgttcc aggagtacaa cgactccgcc atcagcaaga cctgcaactt cgcccacgac
     1441 gcgaccgagg cgtacgtcga ggagatctac cggctggcgt acaagctcaa ctgcaagggg
     1501 gtcacggtct atcgcgacgg cagccgggac atgcaggtgc tctcgaccgg cagcacggcg
     1561 aagaaggtgc acgagcaggc cacgagcagc ggcaaggccg aggcgcgggc ggacctggcg
     1621 gcggcgacgc gggcgaacgc cgaccttcat ggtgagctgg cggagctgcg ggcggagaac
     1681 cagcggctcc ggaagctgat gatggacctc gaggccgaga acctccagcg gcggcagaag
     1741 cgctcgcggc cggagctgct gcgcggcacc acgcgtcggg tggagacccc gctgggcacg
     1801 ctgtacgtca acatcaccga ggacgacaag gggcagccgt tcgaggtgtt catgagcctg
     1861 ggcaaggcgg gcggggcgct gatggcggac gtggaggcgc tgggccgcct gatcagcctg
     1921 gcgctgcggt ccggcattcc gatgcgcgag gtgtggcgcc agctccgggg gatcagctcg
     1981 gaccgcgtga tcgggctggg gccgaacaag gtgctgtcgg tgccggacgc ggtggggatc
     2041 gcgatcgagc ggtggatgct ggagaagcag gggatccagc aggagctgct gccggggtcc
     2101 acgccgccga acggggtgcc ggcggtggac gtggccccgg tggtggcgcc ggcgcaggcg
     2161 ggtgagggga gtgggggaga gcagatcgtg ttcggcgggc tgcaggaga
//
LOCUS       DASUYN010000249         2286 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1403061, whole genome shotgun sequence.
ACCESSION   DASUYN010000249 DASUYN010000000
VERSION     DASUYN010000249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2286)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2286)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2286
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1403061"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..247
                     /locus_tag="VF061_04910"
     CDS             <1..247
                     /locus_tag="VF061_04910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668872.1"
                     /translation="MRVTGGLDPGAPIPAIQSELGTAFVVPVPRPALVPCREIAAWPA
                     GATVVPLIDTRRSVVVRRGVPPITVDFDGRLRAAERP"
     gene            244..1893
                     /locus_tag="VF061_04915"
     CDS             244..1893
                     /locus_tag="VF061_04915"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEX6668873.1"
                     /translation="MSFRARLFVASTLAVLVPLAVLALGVRREMDRRLGDESRRRVSA
                     AVERLTGELALERERIAARLDALARALVADNRFRLGLQGESASRAYVLDWAGEAMRLS
                     GLSLLQLQDSAGRIVSSGHFRNEYDEVRRELPRFLAEVGPSPALVQVRTAEASLLALA
                     AAEPVTVAGRPLTLVGGIAAEERFLRRLDPDPDLAVALATPGAPAASDVVGTLALPYL
                     DLATGAADSARLVVTQSGATLAALRQGLNTWALVALAVTALLALLLAAWLSRVLSRPL
                     TELAEKTASIDLDRLDQDFPTDRGDEVGALSRLLGEMTVRLRRAVAGLREAERRVAMG
                     DIARQVNHDIKNGLVPIRNVLRHLDQVARDQPAALAGVFEERRATLESSVTYLDTLAR
                     NYARLSPAVSPERCDVNALVAEVLQAGRSGAAVRVELAEGLPAVAVDRLMLRRVIENL
                     VGNAADAVAGREGGTVTVSTDRATRDGRGSVVRIHVADTGAGMSKAELDHAFDDFYTT
                     KPGGTGLGLSIVRRLVLDLGGSLRIDTEPGAGTRATVEIPL"
     gene            1890..>2286
                     /locus_tag="VF061_04920"
     CDS             1890..>2286
                     /locus_tag="VF061_04920"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX6668874.1"
                     /translation="MTLVLVVDDVAPLAEQYAYDLRRTGGYEVLTAPTGEKALEILAT
                     APVDCVVLDLEMPGMDGFEVLRALERKGAPVPVIVYTGTGSYDRCIQAVRLGAYGFID
                     KAEPMERVVQEIESAMERSRLRSENFALRR"
BASE COUNT          277 a          811 c          874 g          324 t
ORIGIN      
        1 gatgcgggtg accggcgggc tggatcccgg tgcgcccatt cccgccatcc agtccgagct
       61 gggcacggcc ttcgtcgtgc cggtgccgcg gccggcgctg gtgccctgcc gcgagatcgc
      121 cgcctggccc gccggcgcca cggtcgtgcc gctgatcgac acccgccgca gcgtcgtcgt
      181 gcgccgcggc gtccccccga tcacggtgga cttcgatggc cggcttcgcg ccgcggagcg
      241 cccgtgagct tccgcgcccg cctcttcgtc gcctccactc tggcggtgct ggtcccgctc
      301 gccgtgctcg ccctcggcgt gcgccgggag atggatcgcc ggctgggtga cgagtctcgg
      361 cggagggtgt cggcggcggt ggagcgcctg accggggagc tggccctcga gcgggagcgg
      421 atcgcggcgc gactcgacgc cctcgcccgc gctctcgtcg ccgacaatcg gttccggctc
      481 gggctgcagg gcgagtccgc ctcccgcgcc tacgtgctcg attgggccgg cgaagcgatg
      541 cggctctcgg gactctcgct cctccagctc caggacagcg cggggcgaat cgtgagctcg
      601 gggcactttc gcaacgagta cgacgaggtg cgccgcgagc tgccccggtt cctggcggag
      661 gtgggcccgt cacccgcgtt ggtacaggtc cgcacggcgg aggcgtcgct cctcgcgctc
      721 gcggcggccg agccggtgac ggtggcgggg agaccgctca cgctggtggg cggcatcgcc
      781 gccgaggagc gcttccttcg ccggctggat cccgaccccg atctggcggt cgccctggcc
      841 acgcccggcg ccccggccgc gagcgacgtg gtcggcacgc tcgcgctccc ctacctcgat
      901 ctggccaccg gcgcggccga cagcgcccgg ctggtcgtga cccagtcggg tgccacgctc
      961 gccgcgctgc gccaggggct caacacctgg gcgctggtcg ccctggccgt gacggcgctg
     1021 ctcgcgctgc tcctcgcggc ctggctgtcg cgggtgctga gtcgcccgct gaccgagctg
     1081 gcggagaaga ccgcatccat agatctcgac cggctggacc aggacttccc caccgaccgt
     1141 ggcgacgagg tcggcgcgct ctcccggctg ctgggcgaga tgacggtgcg gctccggcgc
     1201 gcggtcgccg ggctccgcga ggccgagcgg cgggtcgcga tgggcgacat cgcgcgccag
     1261 gtgaatcacg acatcaagaa cgggctggtg ccgatcagga acgtgctgcg gcacttggat
     1321 caagtggcac gggatcagcc ggccgcgctc gccggcgtgt tcgaggagcg gagggccacg
     1381 ctggagtcga gcgtgaccta cctggacacg ctggcgcgta actatgcccg cctgtcgccc
     1441 gccgtgtcgc cggagcggtg cgacgtgaac gccctcgtgg ccgaggtgct gcaggccggg
     1501 cggagcggcg cggcggtgcg ggtcgagctc gccgaggggc tgccggcggt ggcggtggac
     1561 cggctgatgc tccggcgggt gatcgagaac ctggtcggca acgccgccga cgccgtggcg
     1621 ggacgggagg gcggcacggt cacggtttcc accgaccgcg cgaccaggga cggccgggga
     1681 tcggtggtcc ggatccacgt cgccgacacc ggggcgggca tgagcaaggc cgagctggac
     1741 cacgcgttcg acgactttta caccaccaag ccgggcggca ccgggctggg cctctccatc
     1801 gtgcgccgat tggtcctcga cctcggaggc tcgctgagga tcgacaccga gccgggcgct
     1861 ggcacccgcg cgaccgtcga gatcccgcta tgaccctggt cctcgtggtg gacgacgtcg
     1921 ctccgctggc ggagcagtac gcctacgacc tgcgccgcac cgggggctac gaggtgctca
     1981 ccgcgcccac cggcgagaag gcgctggaga tcctcgccac ggccccggtg gactgtgtcg
     2041 tgctcgacct ggagatgccc ggcatggacg ggttcgaggt gctgcgcgcg ctggagcgga
     2101 agggggcgcc ggtaccggtg atcgtgtaca ccgggaccgg cagctacgac cgctgcatcc
     2161 aggcggtccg gctcggcgcc tacggcttca tcgacaaggc cgagccgatg gagcgggtgg
     2221 tgcaggagat cgaaagcgcc atggagcgga gccgcctgcg gtcggagaac ttcgcgctcc
     2281 gccggc
//
LOCUS       DASUYN010000250         2327 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_741296, whole genome shotgun sequence.
ACCESSION   DASUYN010000250 DASUYN010000000
VERSION     DASUYN010000250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2327)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2327)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2327
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_741296"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..552
                     /locus_tag="VF061_04925"
     CDS             <1..552
                     /locus_tag="VF061_04925"
                     /inference="COORDINATES: protein motif:HMM:NF015566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HEX6668875.1"
                     /translation="AGDVEAGLRVGVLLELFALDVLPVGAVRYPDYGPATVAATALAA
                     DSPWQFALGMSTALGLVIAVLGGYSLSMVRRANARAIQRRSAALAAGESSAIRRLQYG
                     ALSRDAARAAALTALGLAAAWLLAEPVAGLDRSTGLGLTLVAMGCALSAVIGGALRSA
                     GRGPRLRWFGAGALVGLLAAALR"
     gene            549..1283
                     /locus_tag="VF061_04930"
     CDS             549..1283
                     /locus_tag="VF061_04930"
                     /inference="COORDINATES: protein motif:HMM:NF015570.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system mannose/fructose/sorbose family
                     transporter subunit IID"
                     /protein_id="HEX6668876.1"
                     /translation="MNGGWHAWLRLLAVQGTWNYERMLGVGMGYAAEPLLDDLKTVDP
                     VRHTEAVVRSAEFFNCHPNLAGLALGATARAEYDGAPGPQIARLRTALCSPLGALGDQ
                     LFWAGLVPLLVGAALVGVVAGIPWWAVGGFLLVYNAARIATGVWSLRTGLDAGMSVGG
                     AIAKSWISRAIERVGPAAGFSIGLAVPLVGSWYLEDLGWPAALGALAVAATGVAVTRW
                     FGASLTAVRFALLALLLLVLFRWVLP"
     gene            1280..1546
                     /locus_tag="VF061_04935"
     CDS             1280..1546
                     /locus_tag="VF061_04935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HEX6668877.1"
                     /translation="MIEREAKVVNQEGLHARPAAKIVRLASTFNSEIELFKDGVAVNG
                     KSIMGVMMLAAECGSSIVIRADGPDAEQAVTAISQLVSEGFGEP"
     gene            1543..>2327
                     /locus_tag="VF061_04940"
     CDS             1543..>2327
                     /locus_tag="VF061_04940"
                     /inference="COORDINATES: protein motif:HMM:NF017346.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate-utilizing N-terminal
                     domain-containing protein"
                     /protein_id="HEX6668878.1"
                     /translation="MSAARIIRGIGVSPGVAVAPALLMQWDFPEVPDRAVRPDQVEDE
                     VRRLREAVAEVVGHLNELGQKVLRRAGPEEARIFDAQILMAQDEEFLGSVEVLIRKNQ
                     LSAETAYEFKALELRNLWSGAARLRERLADLNAIQLRIINRLMGRSGTELGAISPDEQ
                     VIVVAHELSPGLTVQLDREHVVGLVSEEGTRTAHAAILAHSLGIPAVMGAVGALARIP
                     DGAMLLLDGQSGVIVLEPTLDELDDAKTQVSRRNKLELQLEGIV"
BASE COUNT          281 a          820 c          884 g          342 t
ORIGIN      
        1 gcgggcgacg tcgaggccgg cctgcgggtc ggcgtcctcc tcgagctgtt cgcgctcgac
       61 gtgctgcccg tgggtgcggt ccgctacccg gactacggcc cggccacggt ggccgccacg
      121 gcgctcgcgg ccgattcgcc ctggcagttc gccctcggga tgagtacggc cctcgggctc
      181 gtgatcgcgg tgctcggcgg gtacagcctg tccatggtgc ggcgggcgaa cgcccgcgcc
      241 atccagcgcc gctcggcggc gctcgcggcg ggcgagagca gcgcgatccg gcggctccag
      301 tacggcgcgc tgtcccgcga cgccgcccgc gccgcggcgc tcaccgccct ggggctggcg
      361 gcggcctggc tcctggccga gccggtcgcg ggcctcgacc gctccaccgg tctcggcctc
      421 acgctggtcg cgatgggctg cgcgctgtcg gccgtgatcg gcggggcgct ccgcagcgcc
      481 ggcaggggcc cgcgacttcg ctggttcggc gcgggcgcgc tggtgggact gctggcggcg
      541 gcgctgcgat gaacgggggg tggcacgcct ggctgcggct ccttgcggtg caggggacct
      601 ggaactacga gcggatgctg ggggtgggca tgggctacgc ggccgagccg ctcctcgacg
      661 acctgaagac ggtggacccg gtccgccaca cggaggcggt cgtccgctcg gcggagttct
      721 tcaactgcca ccccaacctg gccggcctcg cgctcggcgc gacggcccgc gccgagtacg
      781 acggagcgcc gggccctcag atcgcccgcc tgcggaccgc gctctgcagc ccgctcggcg
      841 cgctcggcga tcagctgttc tgggcgggcc tggtcccgct cctggtcggg gccgcgctcg
      901 tcggggtggt cgccggcatc ccctggtggg cggtcggcgg gttcctcctg gtgtacaatg
      961 ccgcccggat cgcgaccggg gtgtggtcgc tccggaccgg gctcgacgcg gggatgagcg
     1021 tgggcggcgc catcgcgaag tcctggatct cgcgcgccat cgagcgggtg gggcccgccg
     1081 ccgggttctc gatcggcctc gccgtcccgc tggtcgggag ctggtacctc gaggacctcg
     1141 gctggcccgc ggctctgggc gcactcgcgg tcgcggcgac cggcgtggca gtcacccgct
     1201 ggttcggtgc ctccctcacc gcggtgcggt tcgccctcct cgcgctcctg ctgctcgtcc
     1261 tcttccgctg ggtgctgcca tgatcgagcg agaggccaaa gtggtgaacc aggaagggct
     1321 gcacgcccgc cccgcggcca agatcgtgcg cctggcgagc accttcaact ccgagatcga
     1381 gctcttcaag gacggcgtgg cggtgaacgg gaagagcatc atgggggtga tgatgctcgc
     1441 ggccgagtgc ggcagctcca tcgtgatccg ggccgacggc ccggatgccg aacaggcggt
     1501 gacggccatc agccagctgg tctcggaagg attcggggag ccgtgagcgc ggcgcgcatc
     1561 atccggggga tcggcgtctc gcccggcgtc gcggtggcgc cggcgctcct catgcagtgg
     1621 gactttcccg aggtccccga ccgcgcggtg cgcccggacc aggtggagga cgaggtcagg
     1681 cgcctcaggg aggcggtcgc ggaagtcgtc ggccacctga acgagctggg gcagaaggtg
     1741 ctccgccggg ccgggccgga ggaggcgcgc atcttcgacg cgcagatcct catggcccag
     1801 gacgaggaat tcctcggctc ggtcgaggtg ctgatccgca agaaccagct cagcgccgag
     1861 accgcgtacg agttcaaggc cctggagctc cggaacctct ggtccggtgc cgcccggctg
     1921 cgcgagcgcc tggccgatct caacgccatc cagctccgga tcatcaatcg gctgatggga
     1981 cggagtggca ccgagctggg tgccatctct ccggacgaac aggtcatcgt cgtcgcccac
     2041 gagctctcgc cggggctgac ggtgcagctc gaccgggagc acgtggtggg gctggtgagc
     2101 gaggaaggca cccgcaccgc ccacgcggcc atcctcgccc acagcctggg cattcccgcc
     2161 gtcatgggcg ccgtcggcgc gctggcccgg atccccgacg gcgccatgct gctgctggac
     2221 gggcagagcg gcgtcatcgt tctcgagccg acgctggatg agctcgacga cgccaagacc
     2281 caggtcagcc gccggaacaa gctcgagctg cagctcgaag ggatcgt
//
LOCUS       DASUYN010000251         3197 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1184258, whole genome shotgun sequence.
ACCESSION   DASUYN010000251 DASUYN010000000
VERSION     DASUYN010000251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3197)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3197)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3197
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1184258"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..850
                     /locus_tag="VF061_04945"
     CDS             <1..850
                     /locus_tag="VF061_04945"
                     /inference="COORDINATES: protein motif:HMM:NF013078.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="zinc dependent phospholipase C family protein"
                     /protein_id="HEX6668879.1"
                     /translation="ANLSVLPAAVADLLRAYPFDFLYGNIAADSSIAKSYAPLGRHCH
                     YWHVGQEIHDLAESDAMRAFGLGYLSHLAADTVAHNYFVPRQLMLTSSTSAVGHSYWE
                     ARVEVHLGDAYARAAKDVILLDHSEADAHLDRLIAPTIFSVRTNRRLFRGMVRLTETT
                     SWQRATQVAREYSRWSLADQDVEQHLGLSYDFMIELLGGSNISVHQLDPSGERPLKTA
                     KELRRRVLRSAGRRNAARLREEAQGHFGLPQRTLEHWIRIAQKLPWRAPEGAAPSPKA
                     LVNGRR"
     gene            862..1311
                     /locus_tag="VF061_04950"
     CDS             862..1311
                     /locus_tag="VF061_04950"
                     /inference="COORDINATES: protein motif:HMM:NF017936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX6668880.1"
                     /translation="MDADEVVRRLGLLPHPEGGFYRETYRSGLTLDLPDGRRRAAATA
                     IHYLLPAGAWSAWHRVASDEIWHHYDGGALRLHLLGGSTRRLHRGEPQALVPAGVWQA
                     AEPEEGPVLCGCSVAPGFDFADFELGQVDELVTAYPDQEALIRRLGR"
     gene            1308..2210
                     /locus_tag="VF061_04955"
     CDS             1308..2210
                     /locus_tag="VF061_04955"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEX6668881.1"
                     /translation="MRLAAWLAVAAIGTTRAPGPAQAQFAAPSTLVRTTPDAPPRGSA
                     AWLEVADDPSRSDQPALTAVAGEVAGEPLHFERRERGYVALFGIPLEGDDTVAVSLLL
                     TRDARVDTSVVRLAVRQPDYPRERITVPPRMVEYDSATRQRIESEGLRARAVSRRSHH
                     TERLWSLPLTLPRAGRITSPYGGAREYNGKVTSRHTGTDFAGAVGAPVVAPARGVVAL
                     VADFYLAGKALYLDHGAGLVTGYFHLSRADVTAGDTVAAGQQIGAVGRSGRVTGPHLH
                     WIMRYGTISLDPMSLVELGRKASP"
     gene            complement(2233..>3197)
                     /gene="gatB"
                     /locus_tag="VF061_04960"
     CDS             complement(2233..>3197)
                     /gene="gatB"
                     /locus_tag="VF061_04960"
                     /inference="COORDINATES: protein motif:HMM:NF004012.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HEX6668882.1"
                     /translation="IVSEPDLRSPAEARSYLTTLRQILMYAGASECSMEQGSLRVDAN
                     ISVRRPGESRLGTKTEVKNLNSFANVERALEAERTRQIALLEGGGRVAQVTLLFNAGT
                     GQVKELRSKEESHDYRYFPDPDLPPLVLDDAWIAACRDALPELPEARRSRLELALGIP
                     AYDARVLTSEVPLADYFESVVAAGVEPKTAANWVMSDVMTTFNETGGFPVPAERLAVL
                     VGLVRAGTVSHQAAKRVYAEMAQSPDADPAAVAERLGLVQVSDQGALATWVDEVLAAN
                     PGEVARYKAGETKLLGFFVGQVMKRSKGKADPKGVQPVLTERLK"
BASE COUNT          441 a         1174 c         1129 g          453 t
ORIGIN      
        1 ggcgaacctg tcggtgctgc ccgccgccgt cgccgatctc ctccgcgcct atccgttcga
       61 cttcctctac ggcaacatcg ccgccgactc gtccatcgcg aagagctacg cgccgctggg
      121 ccgacactgc cactactggc acgtgggcca ggagatccac gacctggcgg agtcggacgc
      181 gatgcgcgcc ttcgggctgg gctacctgtc ccacctggcc gccgacacgg tcgcccacaa
      241 ctacttcgtg ccccgccagc tcatgctcac cagcagcacc tccgccgtcg ggcattccta
      301 ttgggaagcc cgggtagagg tgcacctggg cgacgcgtac gcccgagccg ccaaggacgt
      361 gatcctgctg gaccactcgg aggcggacgc gcacctcgac cggctgatcg cgcccaccat
      421 cttcagcgtg cggaccaacc gccggctctt ccgggggatg gtccgcctca ccgagaccac
      481 cagctggcag cgcgccaccc aggtggcccg cgagtacagc cgctggagcc tggccgacca
      541 ggatgtcgag caacacctcg ggctctccta cgacttcatg atcgagctgc tcggcggcag
      601 caacatcagc gtccaccagc tcgacccctc gggcgagcgc ccgctcaaga ccgcgaagga
      661 gctgcgccgc cgggtgctcc ggtccgccgg ccggcggaac gcggcgcgac tccgggagga
      721 ggcgcagggg cacttcggcc tgccccagcg gacgctggag cactggatac gaatcgccca
      781 gaagctgccc tggcgcgcgc cggaaggcgc ggcaccgtcg ccgaaggcgc tggtgaacgg
      841 acggcgttga gccctccccc catggatgcc gacgaggtgg tgcggcgact cggcctcctt
      901 ccccatcccg agggcggctt ctaccgcgag acgtatcgca gcggcctgac gctcgacctg
      961 ccggacgggc ggcgccgcgc cgccgccacc gccatccact atctcctgcc cgccggcgcc
     1021 tggagcgcct ggcaccgggt cgcctccgac gagatctggc atcactacga tggcggcgca
     1081 ctccgtctcc acctgctcgg cgggagcacc cgacgactgc atcgggggga gccgcaggcg
     1141 ctggtcccgg ccggcgtgtg gcaggcggcg gagccggagg aggggcccgt gctctgtggc
     1201 tgcagcgtgg cgccgggatt cgacttcgcg gacttcgagc tgggacaggt ggacgagctg
     1261 gtgacggcct acccggacca ggaggcgctg atcaggaggc tggggcggtg aggctcgcgg
     1321 cctggctggc ggtcgccgcg atcggcacga cgcgagcccc aggaccggcg caggcccagt
     1381 tcgcggcacc gtccacactg gtgcgcacca cgcctgatgc gccgccgcgc ggctcggccg
     1441 cgtggctgga ggtcgcggac gatccgtcgc ggagcgacca gcccgcgctc actgccgtcg
     1501 cgggggaggt ggcgggagag ccgctccact tcgagcggcg ggagcgcggc tacgtggcgt
     1561 tgttcggcat ccccctggag ggggacgaca ccgtggccgt ctcgctcctg ctcacgcgcg
     1621 acgcgcgggt agatacgagc gtggttcgcc tggccgtgcg gcagcccgac tacccgcggg
     1681 agcggatcac ggtcccaccg cggatggtgg agtacgacag cgcgacgcgc caacggatcg
     1741 agtcggaggg cctgcgcgcc cgcgccgtgt cccgccggtc acaccacacg gagcgactct
     1801 ggtccctgcc gctcacgctg ccgagggccg gccgtatcac cagtccctac gggggtgcgc
     1861 gggagtacaa cgggaaggtg acgagccggc acaccgggac cgacttcgcg ggcgccgtcg
     1921 gcgccccggt ggtggcaccg gcgcgcggcg tggtggcgct ggtggcggat ttctacctcg
     1981 ccggcaaggc gctgtacctc gaccacggcg ccggcctggt gacggggtac ttccacctga
     2041 gccgggcgga cgtcaccgcg ggggacacgg tcgccgcggg gcagcagatc ggcgcggtcg
     2101 ggcggtccgg acgggtgacc gggccccacc tgcactggat catgcggtac gggacgatct
     2161 cgctggaccc gatgagcctg gtcgagttgg ggcggaaggc gtcgccgtga gcaggcgcag
     2221 gtcacgacgc gtctacttca gtctctccgt cagcaccggc tgcactccct tggggtccgc
     2281 cttccccttg ctccgcttca tcacctggcc cacgaagaag ccgagaagct tggtctcccc
     2341 cgccttgtag cgggcgacct ccccggggtt ggcggccagc acctcgtcca cccaggtggc
     2401 cagcgcgccc tggtcgctca cctggacgag gccgagccgc tcggccacag ccgccgggtc
     2461 ggcgtcgggc gactgcgcca tctcggcgta cacccgcttc gccgcctggt ggctcacggt
     2521 gccggcccgc accaggccca cgaggacggc gagccgttcc gccggcaccg ggaatccgcc
     2581 ggtctcgttg aacgtggtca tgacatcgct catgacccag ttggccgcgg tcttgggttc
     2641 gacccccgcc gcgaccaccg actcgaaata gtcggccagc gggacctcgc tggtgagcac
     2701 gcgagcgtcg taggccggga tgcccagcgc caactccagc cggctccggc gcgcctcggg
     2761 gagctcgggc agcgcgtcgc gacaggccgc gatccaggcg tcgtccagca ccagcggcgg
     2821 gaggtcggga tcggggaagt agcgatagtc gtggctctcc tccttggacc ggagctcctt
     2881 cacctggccg gtgccggcgt tgaagaggag cgtcacctgc gccactctgc cgccgccctc
     2941 cagcagcgcg atctgccgag tccgttccgc ctccagggcg cgctcgacgt tggcgaacga
     3001 gttgaggttc ttcacctcgg tcttggtgcc gagccggctc tcccccggcc ggcggacgga
     3061 gatgttggcg tccacccgca ggctgccctg ctccatgctg cactcgctcg ccccggcgta
     3121 catcaggatc tggcgcagcg tggtgagata cgaccgcgcc tccgcgggcg agcgcaggtc
     3181 cggctcgctc acgatct
//
LOCUS       DASUYN010000252         3580 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_522492, whole genome shotgun sequence.
ACCESSION   DASUYN010000252 DASUYN010000000
VERSION     DASUYN010000252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3580
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_522492"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1791
                     /locus_tag="VF061_04965"
     CDS             <1..1791
                     /locus_tag="VF061_04965"
                     /inference="COORDINATES: protein motif:HMM:NF024973.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BatD family protein"
                     /protein_id="HEX6668883.1"
                     /translation="PPTLQPPVIDGVWSYPQATPAGIAATRSIGGRWYDLFVAHQVVF
                     PLLPGRVVVPRATLKYSTPVALQFFSQEERYALTSRAETLSVAALPADGRPAGFGGAI
                     GSGLRLDRRVSPTTARAGEAVTVELALTGEGNTALWPAPDLHWAPGARAYSDKVEERV
                     EVTEGRVGGTKTFRYLVVPDSAGALALPAVGYPYFDLGEERYLAAVLPATAIPVGPGG
                     ATATSTALPPPLMRPAGPALTWRLGRPVPDWVWLLLLLAPPMLLALRGRITLPHRRPS
                     PPPKGDLRTAEEELEAVVRTLVPDPERRTGAGLAAAVRAAGADSALASRVAAARERLL
                     ARRYGPGAGGPEDAALADEVRDLARRLGGSLRGWAGRGAAAVPLVAALWSAALSAQAP
                     PPEALYEQGALAAAAEEFAERAGREPAVAAHWYNLGATYYRLGQQGRARAAWLEARRF
                     APRSSAVAQALRMTPPPDVTSARWSWIPPVAPEELLLLGALGWIAGWLGWTLRPRVRE
                     RWLVLLVFAGAALLAGLALRSWLREPLAVVLDRSALRLSPHGLAPSVAALEAGSSVRI
                     LRRSPGWVMVVAPGSQRGWLADGAVAAVGS"
     gene            1801..3510
                     /gene="mutL"
                     /locus_tag="VF061_04970"
     CDS             1801..3510
                     /gene="mutL"
                     /locus_tag="VF061_04970"
                     /inference="COORDINATES: protein motif:HMM:TIGR00585.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HEX6668884.1"
                     /translation="MPRRIAILPDAVADQIAAGEVVERPASVVKELVENALDAGARHV
                     RVELEQGGKTLVLVSDDGSGMGRDDAVLALDRHATSKVRSAADLVGVGTFGFRGEALP
                     AIASVSRLTLTTSEGDGTATELGVTAGRLDRVADGVRQRGTTVAVRAIFFNTPARRKF
                     LRSVSSETRAAHEVLATLALAHPEVGFELHVDATCRLLVPAGQTLEERLPSVWGGDLA
                     ATLLPVSYAAGAFRVTGFTQRPGDAQPTGRRTQLFVNGRPFKDPFLVRAAEAGYRSAI
                     HPGDRPSVLLNIEVAPGEVDVNVHPAKLEVRFRDRIGVERVVEEAVRDALGALAAAVR
                     VGDWRPGAFAAPRELHHAQAVAGIDLFAPTEAPSLSDPGAVEPTPGFSVPLLQVFDTY
                     IMYEAPEGVVIVDQHSAHERVLYELVMAQLTGADSPAQRLLLPLTLELTDEELDAVET
                     HGEELGRIGFEVEPFGGRAVAVHAVPSPHPRFDAEICFRETIADLARGRFGGWANRLE
                     RFAATYACRAAVKAGQRLDDREMRELLLRLFATDLPPHDVHGRSTIVQLPREELERRF
                     GRR"
BASE COUNT          415 a         1326 c         1332 g          507 t
ORIGIN      
        1 ccgccgacgc tccagccacc ggtcatcgac ggcgtctgga gctacccaca ggccacccct
       61 gccggcatcg cggcgacccg cagcatcggc gggcgctggt acgatctctt cgtcgctcac
      121 caggtggtgt tcccgctgct ccccggcagg gtcgtggtgc ccagggccac gctcaagtac
      181 agcacgccgg tagcgctcca gttcttcagc caggaggagc gctacgcgct caccagccgg
      241 gcggaaacgc tctctgtcgc cgcccttccc gcggatggac gccccgcggg attcggtggc
      301 gccatcggtt ccggcctgag gctcgaccgg cgggtcagtc cgaccacggc ccgggcgggg
      361 gaggccgtga ccgtggagtt ggcgctgacg ggcgaaggca acacggcact gtggccggcg
      421 cccgacctgc attgggctcc cggcgcgcgg gcgtacagtg acaaggtgga ggagcgagtg
      481 gaggtcaccg agggtcgcgt gggcgggacc aagacgttcc gctacctcgt ggtacccgac
      541 tcggccggcg ccctcgcgct gccggcggtc ggctacccgt acttcgacct cggtgaagag
      601 cgttacctgg cggccgtcct gccggccaca gccattccgg tcgggcccgg cggcgccacg
      661 gccacctcca cggcgctccc gccgccactg atgcgtccgg ccggaccggc gctgacctgg
      721 cgactgggtc ggccggttcc cgattgggtc tggctcctgc tgctgctggc gccgccgatg
      781 ttgctggcgc tccggggccg gatcacgctg ccgcaccgcc ggccatcgcc cccacccaag
      841 ggagacctga ggacggccga ggaggagctg gaggccgtcg tgcgcaccct ggtgcccgat
      901 ccggagcggc gcaccggcgc cggactcgcc gcggccgtgc gcgcggccgg cgccgattcg
      961 gcactcgcct cgcgggtggc cgccgcacgc gaacggctgc tcgccaggcg ctacggtccc
     1021 ggagccggtg ggccggagga tgcggcgctg gcggacgagg tgcgggacct ggcgaggcgg
     1081 ctgggtgggt cgctccgcgg ctgggcgggc cggggggcgg ccgcggtgcc gctcgtggcg
     1141 gcgctgtggt ccgccgcgct gtcggcccag gcgccgcctc ccgaggcgct ttacgagcag
     1201 ggcgcactcg ccgcggccgc cgaggagttc gccgagcggg cggggcgtga gccggccgtc
     1261 gcggcgcact ggtacaacct cggggcgacc tactaccgcc tggggcaaca gggacgggcc
     1321 cgggccgcct ggctggaggc tcgccgcttc gccccgcgct cctccgccgt cgcgcaggcc
     1381 ctgcggatga cgcccccgcc ggacgtcacc tcggcgcggt ggagctggat ccccccggtc
     1441 gcccccgagg agctcctcct cctcggcgcc ctcggctgga tcgccggctg gctcggctgg
     1501 accctgcggc cgcgggtgcg ggaacgctgg ctcgttctgc tcgtcttcgc cggggcggcg
     1561 ctgctggccg gtctggcgct ccggagctgg ctccgggagc cgctcgccgt cgtgctcgac
     1621 cgcagcgcac tcaggctctc gccccacggc ctcgctccga gcgtcgccgc gctcgaggcc
     1681 ggcagcagcg tgcggatcct gcgccgttcg cccggttggg tgatggtggt ggcgccgggc
     1741 tcgcagcgcg gatggctcgc cgacggagcg gtggccgcgg tcggcagcta gattttcccg
     1801 atgccccgac gcatcgccat tctccccgac gccgtggccg accagatcgc cgcgggcgaa
     1861 gtcgtcgagc gcccagcctc cgtggtgaag gagctggtgg agaacgcgct cgacgccggc
     1921 gcacggcatg tgcgggtgga gctggagcag ggcggcaaga ccctggtact ggtgagcgac
     1981 gacggcagcg ggatgggtcg ggacgacgcg gtgctcgcgc tcgaccgcca cgccaccagc
     2041 aaggtgcgga gcgcggccga cctggtcggg gtcggcacct tcggcttccg gggcgaggcc
     2101 ctgccggcga tcgcctcggt ctcccgtctc acgctcacga cctccgaggg cgacggcacc
     2161 gcgaccgagc tcggcgtcac cgccgggcgc ctcgaccggg tggccgacgg ggtgcgtcag
     2221 cggggcacca ccgtcgccgt tcgcgccatc ttcttcaaca cgcctgcccg ccgaaaattc
     2281 ctccgctccg tctcgagcga gactcgcgcc gcgcacgaag tgctggccac cctcgcgctc
     2341 gcccacccgg aggtcggctt cgagctccac gtggacgcca cctgccgtct gctggtcccg
     2401 gcgggtcaga cgctggagga gcggctgccc tcggtgtggg gcggggacct cgcggccaca
     2461 ctcctgccgg tgagttacgc ggccggcgcg tttcgggtca ccgggttcac ccagcggccc
     2521 ggagacgccc aacccaccgg ccggcggacc cagctcttcg tcaacggccg cccgttcaag
     2581 gatccctttc tcgtgcgcgc ggcggaggcc gggtatcgct cggcgatcca tcccggggac
     2641 cgtccctcgg tcctgctcaa catcgaagtg gccccgggtg aggtggatgt gaacgtccat
     2701 ccggccaagc tcgaagtccg cttccgggat cggatcgggg tcgagcgcgt ggtggaggag
     2761 gcggtgcgcg acgcactggg cgcactcgcg gccgccgtcc gggtgggcga ctggcggccg
     2821 ggagcgttcg ccgctccccg cgagctgcac cacgcgcagg ctgtcgccgg gatcgacctc
     2881 ttcgcgccga ccgaggctcc gtcgctctcc gaccccggcg ccgtcgagcc gacgcccggg
     2941 ttctcggtgc cgctcctcca ggtattcgac acatacatca tgtacgaggc gccggaaggc
     3001 gtggtcatcg tggaccagca ctccgcccac gagcgggtgc tgtacgagct ggtcatggcc
     3061 cagctcaccg gagccgactc accggcgcag cgacttctcc tgccgctcac cctggagctc
     3121 accgacgagg agctggacgc ggtggagacc cacggcgagg agctcgggcg catcggcttc
     3181 gaggtcgagc cgttcggtgg ccgggcggtg gccgtgcacg cggtgccctc gccccaccct
     3241 cgcttcgacg ccgagatctg cttccgcgag acgatcgcgg atctcgcccg tggccggttc
     3301 ggcggctggg ccaatcgcct ggagcgcttc gccgccacct acgcctgccg cgcggcggtg
     3361 aaggcggggc agcgcctgga cgaccgcgag atgcgcgagc tgctgctgcg cctcttcgcc
     3421 accgacctgc cgccgcacga cgtgcacggc cggtcgacga tcgtccagct gccgcgagag
     3481 gagctggagc gccggtttgg ccggcgctag ggtccccgtg atcgtggggg cgaccgcggt
     3541 ggggaagacc gcggtcgccc ttgcgctgtc ggcccactgg
//
LOCUS       DASUYN010000253         8414 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1403826, whole genome shotgun sequence.
ACCESSION   DASUYN010000253 DASUYN010000000
VERSION     DASUYN010000253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8414)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8414)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8414
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1403826"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1176
                     /locus_tag="VF061_04975"
     CDS             <1..1176
                     /locus_tag="VF061_04975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668885.1"
                     /translation="AGGSVAFAAVQKITNAKWSGLVIRFAEASVAFLPVSLLGLILIF
                     TLGYHAVYGPMEAAVHGMQHSKEVWLSRPFMFGRLLIGLAVLYWVGWKLVRTDLIPDM
                     FATRAAAGPGRRSLFDRWTHGFDGSRGAAAEQEARLRRLAPLYVVLYAIVFSLVAFDG
                     IMALQPHWFSNLLGGFFFMGSFLGAHMLLALMAMYGGSQIGIKDLISPKQRHDLGKLC
                     FGFTVFWTYLMWAQFLVIWYGNLPEETGFVFARLWGEWRPLGTAVLIGMFILPFFGLL
                     GVAPKKVRVTMGFFALVSLVSLWLERYLLVMPSVTPLPGPVFGLPEAGPTLMFLGLYL
                     FCYALFARTFPMVSPRLAEITLDRERGHAVVAAEFDHEEGPTDYVPAELIERREKPR"
     gene            complement(1274..2305)
                     /locus_tag="VF061_04980"
     CDS             complement(1274..2305)
                     /locus_tag="VF061_04980"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HEX6668886.1"
                     /translation="MRHIPEDELHAYLDQGLSRSQAVEIESHLAVCSSCRASRDSIAA
                     LRDRTTALLATFAPARRLPPAFDTLRERAADRVSIRRRRIRIGAWAASLVAAVGLGWT
                     ASSVVGPGRTVTVAERESSPATPAPATSIVAADTLATQPAPARPAPARPRSPDPTPVR
                     FESRRSSPSAEPAVERMREDSIRAAKLAVLDPAPVLELSPLEDRGAEDGEQFEGMWRT
                     MSWDGAQTEAGRSVPHIDGLPVLRVQVQANDQGKRPLMVVAQQLSSGQVIQTIEGPAA
                     DVSQLLSRRTATSADGGLSVTVSDATPAADQAMAMQLGDRMLAITGALPSDSLRAMIR
                     RINAEMRSK"
     gene            complement(2289..2843)
                     /locus_tag="VF061_04985"
     CDS             complement(2289..2843)
                     /locus_tag="VF061_04985"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX6668887.1"
                     /translation="MGDSTGRRGVVSDELEQLYQSTYTAVVRFLYRKVWDAERAEDLA
                     QEVFVRALAHRPDKPRAWVFAVAANLARDEARAAVRRKRHLTLLKGDPIAQPTVSPSA
                     DDTVEHDEKMASVQEALSTLTPRDREILLLWDAGLSYPEIAAQTGLAVGAVGTTLARA
                     RRRLVDAHDRQQNRTRLGDNAAHS"
     gene            complement(2885..3703)
                     /locus_tag="VF061_04990"
     CDS             complement(2885..3703)
                     /locus_tag="VF061_04990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668888.1"
                     /translation="MTAPGFVQPLPAAATNLPCRKLGSQCRALRVTLRVGSLEEGDTS
                     LDHEATWLLGHTEHISFGDLWWGEGDLYVEAILHVPCRHLRTDGTGSECRLFGYRGAA
                     RRPPRRPPQPRRLGGDRFQVVDAKRVVTRSLPPPPVPRHALPVLGGENPCATAPCRTS
                     DHRRGAACCRDLQVEIMCTKGDRRLEALVRSRRSPYLCKIERGGDFSLDVEMISACGY
                     LEEDGVACSLHGRVRADGRPAKPDLCTEWPPKNRGLHPGCVFGPRRRRRRPSGD"
     gene            3875..4369
                     /locus_tag="VF061_04995"
     CDS             3875..4369
                     /locus_tag="VF061_04995"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HEX6668889.1"
                     /translation="MRVTSLLAGLAFVLAACGGGEQNAGEQQTTATPDQAAPAGDAAP
                     AGGAAPAAGGTTHDVNMVLEGSSYKYVPDQLTIKSGDVVRFINVSGGPHNVSFWADSI
                     PSGAADALKAGMPDQMAPLEGSLITEPNAVYTINFANAPAGEYKYYCLPHLALGMKAK
                     LTVQ"
     gene            complement(4442..5332)
                     /locus_tag="VF061_05000"
     CDS             complement(4442..5332)
                     /locus_tag="VF061_05000"
                     /inference="COORDINATES: protein motif:HMM:NF025736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HEX6668890.1"
                     /translation="MAVAVAARERVESGRASSLRPVDLLLAGYLAIVSVVAVLRAPSL
                     PHCWGLLVGHALFGVLLYLLTRPGLGPLGRSVREVYPLLLLVPLYSELDVLNGPGGGT
                     VYDATVQGWELAIFGAQLSTEWWRAMPSRFWSAVLHAAYLAYYLIVVTPAFYFVWRRD
                     LAALRHFILVVMTTFVLCYLVFIFFPVAGPYYVFPRPDPWFLDNVFARAVYDTLATGS
                     SYGAAFPSSHVAAAIAATLAAWRGSRALGWSLAVPTVLLSVAVVYCQMHYGVDAIGGL
                     LTGAGVTAVVERLDKSAGTR"
     gene            complement(5323..6279)
                     /locus_tag="VF061_05005"
     CDS             complement(5323..6279)
                     /locus_tag="VF061_05005"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX6668891.1"
                     /translation="MTGATGFVGSHLAEALRRRGDEVTALVRSPAKAAALGPLGVRTA
                     AGDLDDAASLARAVEGQDIVYHVAGLVAARSESAFLRANRDGTASLVAAAARANVPRF
                     VYVSSMAAAGPATKGRPLTGTEPPRPVTAYGRSKLAGEQAVRAEAIPWVIVRPPTVYG
                     PRDREVLKVFRMARWGVAPVFGDGSQELSAVHGADLAGALMAAGTAEGTPGKVYYACH
                     PEVVTSAEFVRAVGHAMGRRVRLLPIPPSLGRAMLGVTEAAAGVTRRVTILTRDKANE
                     FFQAAWTGDPGPLTRDSGWRAAHDLASGLADTSRWYRSTGWL"
     gene            complement(6288..7316)
                     /locus_tag="VF061_05010"
     CDS             complement(6288..7316)
                     /locus_tag="VF061_05010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668892.1"
                     /translation="MRRDVAALLSRDKNPFFEHAEAEYLLAERDGTVVGRIAAISNRL
                     HNETHGDRVGFFGFFECIRDQGVADALFAAAGDWCRSKGHDVLRGPASFSVNDECGLL
                     VDGFEFPPALMMPHNPPYYVELVERAGFVKAKDLWVYQGGSEERYIPVPERLARGTEL
                     IRQRLGITIRPLDLSRFDEEVEGIKRIYNAAWEKNWGFVPMTEREIDHLAEQFRPVVI
                     PEFVPVAEKDGQVIGFGIALPDLNVVFRKNRSGHLLPVLPRLLWSLKRRKIRRARILL
                     LGVVPEFRGKAVDAMLYHWIWTRAEHLGFTWGEAGWILEDNAAMNAGLEKMTFRVYKT
                     YRLYQRAL"
     gene            complement(7421..>8414)
                     /locus_tag="VF061_05015"
     CDS             complement(7421..>8414)
                     /locus_tag="VF061_05015"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX6668893.1"
                     /translation="ATRALHRYGSGCTGSRFLNGTLDLHEQLERSLAEFLGKEACLVF
                     STGYSANLGLISGLVGRGETVYLDKLDHASIVDGAKLSYGETERFNHGDLANLERRIE
                     RKGSGGGAMIVVDGVYSMEGNIADVPGLVRVARKHGAALALDDAHALGVLGPNGDGTA
                     AHFGMTDEVDIIAGTFSKSLASIGGFVAASENVIHYLKHHSRPLIFTASLPPSNTAGV
                     LAALQVLQDEPARRDQLWANTRRLQEGFRNLGFDIGPTRTPIVPVLIGPLEKTFLMWR
                     RLFDAGVFTNPVAPPAVPASQCRLRTSLMATHTFDQVDFALEQFARIGRDLGVI"
BASE COUNT         1262 a         2950 c         2956 g         1246 t
ORIGIN      
        1 gccggcggaa gcgtcgcctt cgcggcggtc cagaagatca ccaacgccaa gtggtcgggc
       61 ctggtcatcc ggttcgcgga ggcctcggtg gccttcctgc cggtctcgct cctcggcctg
      121 atcctgatct tcacgctcgg ctatcacgcg gtctacggcc cgatggaggc cgcggtccac
      181 gggatgcagc actcgaagga agtgtggctc tcccgcccct tcatgttcgg ccgcctgctc
      241 atcggcctgg cggtgctcta ctgggtgggc tggaagctgg tccgcaccga tctcatcccc
      301 gacatgttcg ccacccgcgc cgccgcgggc ccgggccgcc gctcgctgtt cgatcgctgg
      361 acccacggct tcgacgggtc gcgcggcgcg gccgcggagc aggaggcgag actccggcgc
      421 ctcgcgccgc tctacgttgt gctgtacgcg atcgtgttca gcctggtggc gttcgacggg
      481 atcatggcgc tgcagccgca ctggttcagc aacctgctgg gcgggttctt cttcatgggc
      541 tccttcctcg gcgcccacat gctgctggcg ctcatggcca tgtacggcgg ctcgcagatc
      601 gggatcaagg acctgatttc gcccaagcag cggcacgacc tgggcaagct gtgcttcggc
      661 ttcaccgtgt tctggaccta cctcatgtgg gcccagttcc tggtgatctg gtacggcaac
      721 ctgccggagg agaccgggtt cgtcttcgcg cggctgtggg gcgagtggcg gccactgggc
      781 acggcggtgc tgatcggcat gttcattctc cccttcttcg gactgctcgg cgtggcgccg
      841 aagaaggtgc gggtcacgat gggcttcttc gccctggtga gcctggtctc gctctggctg
      901 gagcggtacc tcctggtgat gccgtcggtg acgccgctcc cgggcccggt gttcggcctc
      961 cccgaggccg gtccgacgct gatgttcctc ggtctctatc tcttctgcta tgccctcttc
     1021 gcgcggacct tcccgatggt ctcgccaagg ctggccgaga tcacgctgga ccgggagcgg
     1081 ggacacgcgg tcgtcgctgc ggagttcgac cacgaggagg gcccgacgga ttacgtcccg
     1141 gcggagctga tcgagcggag ggagaagccc aggtaaggtc gggtgctgtc accctgagca
     1201 aagcgaaggg ggccatactc gatatggccc ccttcgcttc gttcagggtg acaccgcccg
     1261 tttcacgcgc gagtcacttg ctcctcatct ccgcgttgat ccggcggatc atcgcccgca
     1321 ggctgtcgga gggcagggcc ccggtgatcg ccagcatccg gtcgcccagc tgcatggcca
     1381 tcgcctggtc ggcggcagga gtggcgtcgg agacggtcac cgacagccct ccatcggcac
     1441 tggtcgccgt gcggcgggag aggagctggg atacatccgc cgccgggcct tcgatcgtct
     1501 ggatgacctg gcccgacgag agctgctgag ccacgaccat cagcgggcgc ttgccctgat
     1561 cgttggcctg gacctgcacc cggagcaccg gcagcccgtc gatatggggg acgctccggc
     1621 cggcctcggt ctgcgcgccg tcccaggaca tcgtccgcca catcccctcg aactgctccc
     1681 cgtcctcggc gccccgatcc tccagcgggc tgagctcgag taccggagcg gggtcgagca
     1741 ccgcgagctt ggcggcacgg atggaatcct cgcgcatccg ctccacggcg ggctcggccg
     1801 acggcgagga ccgccgcgac tcgaagcgca ccggggtcgg atcgggggaa cgggggcggg
     1861 ccggggccgg cctcgccggc gccggctggg tcgccagggt gtccgcagcg acgatcgagg
     1921 tcgcgggcgc cggtgtggcc ggagaggact cgcgctccgc caccgtgacg gtgcgacctg
     1981 ggccgactac cgagctcgcg gtccagccca gcccgacggc cgccaccagg ctggccgccc
     2041 aggcccctat ccggatccgg cgccgccgga tgctcacccg gtccgcggcg cgctcgcgca
     2101 gggtgtcgaa cgcgggcggc agccgccgcg ccggagcgaa ggtggcgaga agcgccgtgg
     2161 tgcggtcgcg cagggcggcg atggaatcgc ggctggcccg gcacgacgag cagacggcca
     2221 ggtggctctc gatctcgacc gcctgagatc gactcagccc ctggtccagg taggcgtgca
     2281 gctcgtcttc aggaatgtgc cgcattatcc ccgagcctcg tccgattctg ctgccgatcg
     2341 tgcgcatcca ccaaccgccg ccgtgcccgt gccagtgtcg tgccaaccgc gcccaccgcg
     2401 aggcccgtct gggccgcgat ctcgggatag ctgagcccgg cgtcccagag caggagaatc
     2461 tcgcggtccc gcggcgtgag cgtgctcagc gcctcctgca ccgacgccat cttctcgtcg
     2521 tgctccacgg tatcgtccgc cgacggcgaa accgtgggct gggcgatcgg atcacccttg
     2581 agcagcgtga ggtggcgttt gcgccgcacc gccgcccgcg cctcgtctcg cgccaggttc
     2641 gcggccaccg cgaagaccca ggcccggggc ttgtcgggcc ggtgggccag ggcgcgaacg
     2701 aacacctcct gggccagatc ctcggcgcgc tccgcgtccc ataccttgcg gtagaggaat
     2761 cgcacgacgg cggtataggt gctctggtac agctgctcca gctcgtcgct cacgacacct
     2821 ctgcgcccgg tcgagtcgcc catgaggacg ggcaacctcc acaggcttgc acacttggag
     2881 tcgattaatc gccggacggt cgtctccggc ggcggcgcgg gccgaaaacg cagccaggat
     2941 gcaggccgcg gttcttcggg ggccattcgg tgcagaggtc cggcttggcc ggccggccat
     3001 ccgcccggac cctcccgtgg agcgagcagg ccaccccatc ctcctccagg tagccgcagg
     3061 cggagatcat ctccacgtcg agggagaagt ccccaccccg ctcgatctta cagagatacg
     3121 gcgagcggcg cgaccgcacc agagcctcca ggcgccggtc ccccttggta cacatgatct
     3181 cgacctgcag gtcccggcag caggcggcgc cccgccggtg gtccgacgtg cgacaggggg
     3241 ccgtggcaca ggggttctcg ccgccgagca cggggagcgc atgccgcggg accggcgggg
     3301 gcggcaggga acgggtcacc acccgcttgg cgtccaccac ctggaaccgg tcgccgccga
     3361 gccgccgcgg ctgcgggggc cgcctgggag ggcggcgcgc ggcgccccga tagccgaaca
     3421 ggcgacattc cgaccccgtg ccgtcggtgc ggagatggcg gcagggtacg tggaggatcg
     3481 cctcgacgta gaggtcaccc tccccccacc acaggtcgcc gaaggagatg tgctcggtgt
     3541 gccccagcag ccaggtggcc tcgtggtcga gggaggtgtc cccttcctcg agggagccca
     3601 cccggagcgt gacccggagc gcgcggcact gcgatcccag cttgcggcag ggaaggttcg
     3661 tggcggcggc gggcagcggc tggacgaagc cgggggcggt catcggtcaa tagtaatcat
     3721 cggtcatcct ctgggacctc ccgacggcag gacctcggcg ccggcgccac ttcctttcgg
     3781 ggaggccccc tgtatctttg tgaacgagtt cacaaagtcg agttcgatcc ggttgttctc
     3841 ggccacttca tatagcttcg gaggcagatc ggtgatgcgc gtgacttcct tgctggcagg
     3901 gctggcgttc gttctggcgg cctgcggcgg cggcgagcag aatgctggtg agcagcagac
     3961 cacggcgacc cctgaccagg cggcgccggc gggcgatgcg gcaccggcgg gcggcgcggc
     4021 tcccgcggcc ggcggcacga cccacgacgt caacatggtg ctcgagggga gcagctacaa
     4081 gtacgtcccc gaccagctca ccatcaagtc gggcgacgtg gtccggttca tcaacgtgag
     4141 cgggggcccg cacaacgttt cgttctgggc cgacagcatc ccgagcggcg ccgccgacgc
     4201 gctgaaggcg ggcatgccgg atcagatggc cccgctcgag gggtcgctga tcaccgagcc
     4261 gaacgcggtc tacacgatca acttcgcgaa cgccccggcc ggtgagtaca agtactattg
     4321 cctgccgcat ctcgctctcg ggatgaaggc gaagctgacg gtgcagtagt ccctcgctgt
     4381 caccctgatc ggagcgaagg gggccatgca tggtcccctt cacttcgttc agggtgacaa
     4441 ttcaccttgt cccagcggac ttgtccagcc gctccaccac ggccgtcacc cccgcccccg
     4501 tcagcaatcc cccgatcgcg tccacgccgt agtgcatctg gcagtagacc accgccacgg
     4561 agagcagcac cgtcggcacg gcaagggacc agccgagcgc ccgggagccg cgccaggccg
     4621 ccagcgtcgc ggcgatggcc gcggccacgt gggagctggg gaaggcggcg ccgtaggagc
     4681 tgccggtcgc gagggtgtcg tacaccgccc gggcgaacac gttgtccagg aaccacgggt
     4741 ccggccgggg aaagacgtag tagggcccgg ccaccggaaa gaagatgaag acgaggtagc
     4801 agagcacgaa ggtcgtcatc accaccagga tgaaatggcg gagcgcggcg aggtcccgcc
     4861 gccagacgaa gtagaatgcc ggagtgacga cgatcaggta gtaggcgaga tacgccgcgt
     4921 ggagcaccgc cgaccagaac cggctcggca tggcccgcca ccattcggtg ctgagctggg
     4981 ccccgaagat cgccagctcc cagccctgga cggtggcgtc gtacaccgtg ccaccgcccg
     5041 ggccgttcag cacgtccagc tcgctgtaca gcggcaccag gaggagcagc ggatagacct
     5101 cccggacgct gcgtcccagc ggtcccagcc ccggccgggt gagcaggtag agcagcaccc
     5161 cgaacagcgc gtgaccgacc aggagccccc agcagtgggg caggctcggc gcccggagaa
     5221 ccgccaccac cgagacgatc gcgagatacc cggccagcag cagatcgacc gggcgaagcg
     5281 aggaggcgcg cccggactcc acccgctcgc gggcggcgac cgctacagcc accccgtgct
     5341 ccggtaccac cggctggtgt ccgccaggcc tgaggccagg tcgtgggccg cacgccagcc
     5401 ggagtcacgg gtgaggggcc cgggatctcc ggtccaggcg gcctggaaga actcgttggc
     5461 cttgtcccgg gtgagaatcg tcacgcggcg ggtcacgccg gccgccgcct cggtcacgcc
     5521 cagcatcgcg cggcccaggg agggcgggat gggcagcagc cggacccgcc gtcccatcgc
     5581 gtggcccacg gctcgcacga actcggcgct ggtcaccacc tcgggatggc aggcgtagta
     5641 caccttgccc ggcgtgccct ccgcggttcc cgccgccatc agcgcgcccg cgaggtccgc
     5701 gccgtgcacc gccgaaagct cctggctgcc gtctccgaac accggggcga ccccccagcg
     5761 cgccatccgg aacaccttga gcacctctcg atcacgggga ccgtataccg tgggtggccg
     5821 cacgatcacc caggggatcg cctccgccct cactgcctgc tcacccgcga gcttgctgcg
     5881 tccgtacgcg gtcaccggcc gcggcggctc ggtccccgtg aggggacggc ccttcgtggc
     5941 cggtcccgcc gccgccatcg aggaaacgta gacgaagcgc gggacgttcg cgcgggccgc
     6001 ggcggccacc aggctcgcgg tgccgtcgcg gttggcgcgg agaaacgcgg actcgctccg
     6061 ggcggccacc agacccgcga catgatacac gatgtcctgc ccttccaccg cacgcgcgag
     6121 cgaggccgcg tcgtcgaggt cgcccgccgc cgtgcgtacc ccgagcgggc ccagcgccgc
     6181 tgccttggcc ggggagcgga ccagcgcggt gacctcgtct cccctgcgcc gcagcgcctc
     6241 cgcgaggtgg ctgccgacga agccggtcgc cccggtcacc agcgccttca tagcgcgcgt
     6301 tggtagagcc ggtaggtctt gtacacccgg aaggtcatct tctcgaggcc ggcgttcatc
     6361 gccgcgttgt cctccaggat ccagcccgcc tcgccccagg tgaagcccag gtgctcggct
     6421 cgggtccaga tccagtggta gagcatggca tccaccgcct tgccgcggaa ctccgggacg
     6481 acgccgagca ggagaatcct ggcgcggcgg atcttccgcc gcttgagcga ccagaggagc
     6541 cggggcagta ccggaagcag atggccggag cggttcttcc ggaacacgac gttgaggtcg
     6601 ggcaaggcga tgccgaagcc gatcacctgg ccgtccttct ccgccaccgg cacgaactcg
     6661 gggatcacga ccggacggaa ctgctcggcc aggtgatcga tctcgcgctc ggtcatgggg
     6721 acgaagcccc agttcttttc ccaggcggcg ttgtagatcc gcttgatgcc ctcgacctcc
     6781 tcgtcgaacc gggagaggtc gagcggccgg atcgtgatgc caagccgctg ccggatcagc
     6841 tcggtgccgc gagccaggcg ctcgggcacc gggatgtagc gttcctcgga gcccccctgg
     6901 tacacccaca ggtccttcgc cttcacgaag ccggcccgct ccaccagctc cacgtaatac
     6961 ggcgggttgt gcggcatcat cagggcgggc gggaactcga atccgtccac caggagcccg
     7021 cactcgtcgt tcaccgagaa ggaggcgggt ccccggagca cgtcgtgtcc cttgctccgg
     7081 caccagtccc cggcggccgc gaagagcgcg tcggccacgc cctggtcgcg gatgcactcg
     7141 aagaagccga agaagccgac ccggtcgccg tgggtctcgt tgtggagccg attgctgatc
     7201 gccgcgatgc ggcccacgac cgtcccgtcg cgctcggcga ggagatactc cgcctcggcg
     7261 tgctcgaaga aggggttctt gtcgcgggag agaagtgcgg cgacgtcccg acgcaacggc
     7321 gggacccaga tcgggtcccg cgcgtggagt cggtagggca gatcgatgaa gcgcctgagg
     7381 tcccgtcggt cccgcgccgc gcggacgcgg agcggtgggg tcagatgacc cccaggtccc
     7441 ggccgatacg ggcgaactgc tccagggcga agtccacctg gtcgaaggtg tgggtcgcca
     7501 tgaggctggt gcggagccgg cactgggacg cgggcaccgc gggcggcgcc accggattgg
     7561 tgaacacgcc ggcgtcgaac agccgccgcc acatgaggaa ggtcttctcc agcggaccga
     7621 tgaggaccgg cacgatgggg gtccgggtgg gcccgatgtc gaagccgagg ttccggaaac
     7681 cctcctgcag ccgccgggtg ttggcccaca gctggtcgcg ccgcgccggc tcgtcctgca
     7741 gcacctgcag cgcggcgagc acgccggcgg tgttggacgg cggcagcgag gccgtgaaga
     7801 tgagtggccg gctgtggtgc ttgaggtagt ggatgacgtt ctcggaggcg gcgacgaagc
     7861 cgccgatgga cgccagcgac ttcgagaacg tcccggcgat gatgtccacc tcgtcggtca
     7921 tcccgaagtg cgccgcggtg ccgtcgccgt tggggccgag cacgccgaga gcgtgggcat
     7981 cgtcgagcgc cagcgccgcg ccgtgcttcc gcgccacccg gaccaggccg gggacgtcgg
     8041 cgatgttccc ttccatcgag tagaccccgt ccaccacgat catggcgccg ccgccgctgc
     8101 ccttgcgctc gatgcgccgc tccaggttgg cgaggtcgcc gtggttgaag cgctcggtct
     8161 cgccgtacga gagcttggcg ccgtccacga tcgaggcgtg atccagcttg tccaggtaga
     8221 cggtctcgcc ccgaccgacc aggcccgaga tgagccccag gttggcggag tagccggtgg
     8281 agaagaccag gcacgcttcc ttgcccagga actccgccag cgagcgctcg agctgctcgt
     8341 gcaggtcgag ggtcccgttg agaaagcggc tgcccgtaca gcccgacccg tagcggtgca
     8401 gcgcccgggt ggcc
//
LOCUS       DASUYN010000254         5026 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1185031, whole genome shotgun sequence.
ACCESSION   DASUYN010000254 DASUYN010000000
VERSION     DASUYN010000254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5026)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5026)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5026
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1185031"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1820
                     /gene="arsA"
                     /locus_tag="VF061_05020"
     CDS             <1..1820
                     /gene="arsA"
                     /locus_tag="VF061_05020"
                     /inference="COORDINATES: protein motif:HMM:TIGR04291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015446 - ATPase-coupled arsenite
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0071722 - detoxification of
                     arsenic-containing substance [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="arsenical pump-driving ATPase"
                     /protein_id="HEX6668894.1"
                     /translation="LMDDPTRHLFYTGKGGVGKTSNACATAVELADTGRRVLLVSTDP
                     ASNLDQVFGVGIGREPTPIPEVPGLSAININPEAAAQAYREQVVGPYRGVLPDDAVAG
                     LEEQLSGACTVEVAAFDEFTELLTADGAAAAFEHVVFDTAPTGHTLRLLQLPAAWTDF
                     LETNERGASCLGPASALKTQQARYAEAVAALADARRTTVILVARPDRVALAEAARTAV
                     ELAELGLRNQLLLVNGVFQATDRSDPLAVALERRGQAALAEMPTVLQGLLRIHIPLQP
                     YNIVGVPALRRLADHEASAPQLPASPANRAGVDLPSLAALVDEVATAGHGLVMVMGKG
                     GVGKTTIAAAVAVELAGRGLPVHLTTTDPAAHLNEALGREVPGLRVSRIDPAAETRAY
                     REKILERSGRKLDAAGLALLDEDLRSPCTEEVAVFHAFSRLVFGARNEIVVMDTAPTG
                     HTLLLLDATGAYHREMLRNAADAGVKLQTPLMRLRDPDYTRVLLVTLAETTPVLEAAE
                     LQADLRRAGIEPFAWVVNASLAAAGPRDPVLAARAAAELEQIACVETTLAARVAVVPW
                     LPEEPRGVDRLRQILAPGRWSASLTPQADRPMLEPAGRR"
     gene            complement(1771..2133)
                     /locus_tag="VF061_05025"
     CDS             complement(1771..2133)
                     /locus_tag="VF061_05025"
                     /inference="COORDINATES: protein motif:HMM:NF014677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF190 domain-containing protein"
                     /protein_id="HEX6668895.1"
                     /translation="MHGFTGQRTLMRIHLGERDKHQGRPLYQAIVELLRSRHYAGATV
                     YRAVMGFGASARLRTDRLELFSLDLPVVVECVETEERIQAILPELDTMIGGGLITLEA
                     VRVIVYRPAPASDDRPEG"
     gene            complement(2181..2576)
                     /gene="crcB"
                     /locus_tag="VF061_05030"
     CDS             complement(2181..2576)
                     /gene="crcB"
                     /locus_tag="VF061_05030"
                     /inference="COORDINATES: protein motif:HMM:NF014584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:1903425 - fluoride transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:1903424 - fluoride transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HEX6668896.1"
                     /translation="MRLVWYVALGGALGSVARYAVGSWIQFRTGSTFPVGTLVVNLSG
                     SFLLGLILRYALETPAVTPEARALLTTGILGGYTTFSTFTYETATLLEEGDWRRATLY
                     AGLSVLLSLAGAFLGIAGARELLAARHAT"
     gene            complement(2608..3687)
                     /locus_tag="VF061_05035"
     CDS             complement(2608..3687)
                     /locus_tag="VF061_05035"
                     /inference="COORDINATES: protein motif:HMM:NF023695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3616 domain-containing protein"
                     /protein_id="HEX6668897.1"
                     /translation="MHQNPEPVPLSFAQAGDPQEFTLDLSAAAQIGTDLWLATDEGTR
                     LARLRPDGQGGYGDVGWYPLGELLDLPGGEDDEIDVEGLGHENGVLWLVGSHSRRRQD
                     ADGDRSEQERLRRLGRVRRRGNRYTLARLPLVREAASSSLIPVRRTEDGRRAARLAGG
                     RRRSLLTDALREDEHLGRFLRIPGKDNGFNVEGLAAAGGHVFLGLRGPVLEGWAVILV
                     VAPEPDPDDAELLRLGRVGRSKGTYRKLFLDLQGLGIRDLHFDGGDLLILAGPTMALR
                     SDAVVVRWRDAARQADDMLVPRDRLEHVLDLPYGSGTTEAVDHPEGIAVVREGQDRSL
                     LVVYDSPSPGRRRGGSGVVADRFPL"
     gene            complement(3883..4494)
                     /locus_tag="VF061_05040"
     CDS             complement(3883..4494)
                     /locus_tag="VF061_05040"
                     /inference="COORDINATES: protein motif:HMM:NF025217.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX6668898.1"
                     /translation="MSGIADSQASLEAVLKDEIIRMYQEVADQPEGTFHFYHGREAAE
                     LFGYEAEWLDRAPAGAVASFAGVGNPHERSQLQPGETVLDLGSGAGLDAIIASWQVGP
                     GGRVIGIDLNPSMCAKAQVHVAMAGGQMECREGSMENIPLPEASVDVAISNGVINLSF
                     RKRRVVQELFRVLRPAGRISITDIVSAKQLSQSIVNDPKLWAS"
     gene            complement(4491..>5026)
                     /locus_tag="VF061_05045"
     CDS             complement(4491..>5026)
                     /locus_tag="VF061_05045"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX6668899.1"
                     /translation="NNLNDGLAWGIFPLFFAAAGMDLARIGVLGFTYPAVWGLLQLGT
                     GALSDRWGRKRLIAGGMLVQGVALAAIALAHGFRPWLAATALLGLGTAMVYPALLAAV
                     GDVAHPQWRGTAVGVYRFWRDCGYAVGALLAGALADLFGMAWAIGAVALLTFASGLAV
                     AVRMPETLRISRQGGSR"
BASE COUNT          809 a         1809 c         1692 g          716 t
ORIGIN      
        1 gactcatgga cgatcccact cggcatcttt tttacaccgg caagggcggc gtcgggaaga
       61 catcgaatgc ctgcgccacg gccgtggagt tggcggatac ggggcggcga gtgctcctgg
      121 tgagcactga tccagcatcc aacctcgacc aggtgttcgg ggtcggcatc gggcgggagc
      181 cgaccccgat tccggaggta ccgggactct cagccatcaa catcaatccg gaggcggcgg
      241 cacaggcata ccgggagcag gtggtcggcc cgtaccgcgg cgtcctgccc gacgatgccg
      301 tggccggcct ggaagagcag ctctccgggg cctgcacggt cgaggtggcc gcctttgacg
      361 agttcaccga actgctgact gcggatggcg ctgcggcggc gttcgagcat gtggtgttcg
      421 acaccgcgcc cacgggccac acgctcaggc ttctgcagct acccgccgcg tggaccgact
      481 tcctggagac caatgagcgc ggggcttcct gtctgggtcc cgcatccgcc ctcaagaccc
      541 agcaggcacg ctacgcagag gcagtcgccg ccctggccga cgcacggcgc acgacggtga
      601 tcctggtcgc acggcccgat cgagtggccc tggccgaggc cgcccgaacc gcggtggagc
      661 tcgccgagct cggcctccgg aaccagctgc tcctggtgaa cggcgtgttt caggcgaccg
      721 accggagcga ccctctggca gtggctctcg agagacgcgg ccaggcagca ctcgcggaga
      781 tgccgacggt gttgcaggga ctgttacgaa tccacattcc gctccagccc tacaatatcg
      841 tgggcgttcc ggccctgcgc cgactagccg accacgaagc gtcagcaccg caattgcctg
      901 cgtcgcccgc gaaccgggcg ggtgtggacc tgccctcgct ggccgccctg gtggacgagg
      961 tggctaccgc gggtcacggg ctcgtcatgg tgatgggaaa aggcggggtc ggcaagacga
     1021 ccatcgcagc ggcggtagcg gtggagctcg ccggtcgggg gctccccgtg catctgacga
     1081 ccaccgaccc cgcagctcac ctgaacgagg cgcttgggcg ggaggtgccc ggactacggg
     1141 tgagccggat agacccggca gccgaaacca gggcgtaccg cgagaagatc ctcgagcgat
     1201 cgggccgcaa gctcgatgcg gccgggctcg ccctgctcga cgaggacctc cgatcgccct
     1261 gcaccgaaga agtggctgtg ttccacgcct tctcccgcct ggtcttcgga gcgcggaacg
     1321 agatcgtggt gatggacacg gcaccgaccg gccacaccct gctcctgctc gacgcgacgg
     1381 gcgcctacca ccgggaaatg ttgcgcaatg ccgccgacgc gggcgtaaag ttgcagaccc
     1441 cgctcatgcg gttgcgcgac ccggactaca cccgcgtgct actcgtcacg ctggccgaaa
     1501 cgaccccggt tctcgaggct gcagaactcc aggccgatct ccgccgcgcc ggcatcgagc
     1561 ccttcgcgtg ggtggtcaac gccagcttgg cggcggcagg accgcgcgac cccgtgctcg
     1621 cggcccgagc ggccgccgag ctcgagcaga tcgcgtgcgt agagacgact ctggccgccc
     1681 gggtagccgt ggtgccgtgg ctacccgagg agccgcgcgg ggtcgatcga ctgcggcaga
     1741 tcctggcgcc cgggagatgg tcagcctcac tcacccctca ggccgatcgt ccgatgctgg
     1801 agccggccgg tagacgatga cgcgcaccgc ctccagcgtg atcaggcccc caccgatcat
     1861 ggtgtccagc tcgggcagga tcgcctggat ccgctcctcg gtttccacgc attccaccac
     1921 gaccggcagg tcgagcgaga acagctcgag ccggtccgtt cgcaggcgcg cgctcgcgcc
     1981 gaaacccatg accgcccgat agaccgtcgc cccggcgtag tggcgcgacc gcaggagctc
     2041 gacgatcgcc tggtacagcg gacgcccctg atgcttgtcg cgctcgccga gatggatccg
     2101 catcagcgtg cgctgccccg tgaagccgtg catggcaacc tccaaggctg gccggtccgc
     2161 gagagctctg gcgcttcgcc tcaggtcgcg tgccgcgccg caagcagctc gcgggcgccg
     2221 gcgatgccga ggaacgcacc cgcgagcgag aggagcacgc tcagtccagc gtacagcgtg
     2281 gcgcgccgcc agtcgccctc ctccagcagc gtggcggtct cgtacgtgaa ggtcgagaac
     2341 gtggtatacc cccccaggat gccggtcgtc agcagggccc gggcctcggg tgtgacggcc
     2401 ggcgtctcga gcgcatagcg aaggatcagt ccgagcagga aggagccgga gagattgacg
     2461 acgagtgtgc cgaccgggaa ggtgctgccg gttcggaact ggatccagct ccccacggcg
     2521 tagcgcgcga cgcttcccag ggctccaccg agggccacgt accacacgag tcgcatcggg
     2581 ttgatctcct cagcttgggt gtggtgctca gagcgggaac cggtcggcca cgaccccgga
     2641 gcctccccgc cggcgccccg gactcgggct gtcgtagacc acgagcagcg atcggtcctg
     2701 accctcccgc acgacggcga tgccctccgg atgatccacc gcctcggtgg tgcccgatcc
     2761 gtagggcagg tcgagcacgt gctccaggcg gtcgcggggg accagcatgt cgtccgcctg
     2821 ccgggccgca tcccgccagc gcacgacgac ggcatcgctc cgcagcgcca tggtgggacc
     2881 cgccaggatg agcaggtcgc cgccgtcgaa gtgcaggtca cggatcccca ggccctgaag
     2941 atccaggaac agcttgcgat aggtgccctt gctcctgccg acccggccca gtcggagcag
     3001 ctcggcgtcg tccggatcgg gctcgggcgc gaccaccagg atcacggccc atccctcgag
     3061 cacgggaccg cgcagcccca ggaacacgtg accaccggcg gcggccagac cttccacgtt
     3121 gaagccgttg tccttgcccg ggatccgcag gaagcgtccg aggtgctcgt cctcgcgcag
     3181 cgcgtcggtg agcagacttc gccggcggcc gccggctaac cgtgcggcgc gtcgtccgtc
     3241 ctccgtgcgc cggaccggga taaggctgga ggatgccgcc tcacgcacca gcggcagccg
     3301 agccagcgta tagcgattcc ctctccgcct gacccggccc aggcggcgga gccgctcctg
     3361 ctcggaccgg tcgccatcgg cgtcctgccg tctccggctg tgcgagccca ccagccagag
     3421 aaccccgttc tcgtgtccga gcccttcgac gtcgatctca tcgtcctcgc cgccgggcag
     3481 gtcgagcagc tcgccgagtg ggtaccagcc gacgtcgccg tacccgccct gcccgtcggg
     3541 ccggaggcgg gccagccggg tgccttcgtc ggtggccagc cagaggtcgg tgccgatctg
     3601 ggcggccgcc gagaggtcca gggtgaattc ctgggggtcg cccgcctggg cgaacgagag
     3661 cgggacgggt tcggggttct ggtgcatgtc gctctaggag tccgccggca ctcttggctt
     3721 gagagcggtc atcatcacgg ctttcacgcc gtaggcctcc gccgcatcct gggtcgctcc
     3781 cttccggaat cggaacccgg gtaccacggc cgatcgcacc cgtgagaagc ccgactcctc
     3841 gagcaaccgg aacatctctc cctccgggag agcacctccg attcacgagg cccagagctt
     3901 gggatcgttc acgatggact gcgagagctg cttggcgctc acgatgtcgg tgatcgagat
     3961 ccgcccggcc ggccgcagca cccggaagag ctcctgaacc acacgacgct tgcgaaagga
     4021 aaggttaatc acaccgttgg agatcgccac gtccaccgag gcctcgggga gcgggatgtt
     4081 ctccatgctc ccctcgcgac actccatctg ccccccggcc atcgcgacgt ggacctgcgc
     4141 cttggcgcac atggagggat tcagatcgat cccgatcacg cgcccgccgg gaccgacctg
     4201 ccaggacgcg atgatggcat ccagccctgc cccactgccg agatcgagca cggtctcccc
     4261 cggttggagc tggctgcgct cgtggggatt cccgacccct gcaaaggacg ccacggctcc
     4321 ggccggcgcc cggtccagcc actccgcctc atagccgaag agctccgccg cctcccggcc
     4381 gtgatagaag tgaaacgtgc cctccggctg gtcggcgacc tcctggtaca tccggatgat
     4441 ctcgtccttg aggacggcct ccagcgatgc ctgcgagtcc gcaattccac tcatcgcgat
     4501 cctccttgcc gggaaatccg aagtgtctcg ggcatccgca cggccaccgc cagacccgag
     4561 gcgaaagtga gcagggcgac ggcgccgatc gcccaggcca tgccgaagag gtccgccagg
     4621 gctcccgcga gcagcgcacc cacggcatac ccgcagtccc gccagaagcg gtagaccccc
     4681 accgcggtgc cgcgccactg cgggtgcgcc acgtcgccca ccgcggccag cagcgcgggg
     4741 tagaccatcg cggtgccgag gccgagcaac gcggtcgcgg ccaaccaggg ccggaacccg
     4801 tgcgccaacg cgatggccgc gagggccacg ccctgcacca gcatgccgcc cgcgatcagc
     4861 cgcttgcgac cccaccggtc ggacagcgcg ccggtcccga gctgcagcag cccccacacg
     4921 gccgggtagg tgaagccgag cacgccgatc cgggccaggt ccatccccgc ggccgcgaag
     4981 aagagcggga agatgcccca ggcgaggccg tcgttcaggt tgttga
//
LOCUS       DASUYN010000255         2999 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_965478, whole genome shotgun sequence.
ACCESSION   DASUYN010000255 DASUYN010000000
VERSION     DASUYN010000255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2999)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2999)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2999
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_965478"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            188..1666
                     /locus_tag="VF061_05050"
     CDS             188..1666
                     /locus_tag="VF061_05050"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX6668900.1"
                     /translation="MTFQRKLLLGFSLMVLPALLVGAEAIRSNRLERRALDALGESMA
                     RTRTYAELETAMFDQGEIVWRYLSGLDSSARREFDLAGEVVAYWEGRWRAELDPGEAD
                     LAEGVVRIQADIRRVTDSVFRLADAGRRPEAFALAQRELKGRLQPALTQMNREVYRRA
                     RESSVRGAYDRLEEILAGEGRTLLVIIALALAVGLVASWVISRGLTRPIRDLTGAMAV
                     VGSGQLDHPVTPTSRDEIGELAAAFARMTDSLRRNVQQLERTQAQLVQSEKLASIGEM
                     SAAVAHGLRNPLASLRAAAQLVRRHPDSPAAGEHLEAIIGEVDRLDRRISHLLSFSRP
                     APFHPIPEKIDRLVEGLLPAFAEPLREHGVDLRLELARDLPEVRVDPMQLEQALLELV
                     SNALDAMPTGGRLRLTTQAGDAGVPPREVVVEVADTGGGIPEHVLPAVCEPFFTTREE
                     GTGLGLAIAKRFVEQNGGRLEIQSTPGAGTTVRVRLPAGAAA"
     gene            1663..>2999
                     /locus_tag="VF061_05055"
     CDS             1663..>2999
                     /locus_tag="VF061_05055"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEX6668901.1"
                     /translation="MSATVLIVDDERTLARAVKAFLIESGYEAEVAPDAEQALGRLET
                     LRPDVVFSDMRLPGMNGIELLRRIREFDPAIAVIIMTAYGTIEGAVEAVKLGAFDYLK
                     KPVDLEELKLLADRALEHSHLQLELSYHRRRAASEVPFASVLGESPAMRAVLEQARQI
                     AALDETPPVLIMGETGTGKGLVARTIHAGSGRASRPFIEVNCTALPATLMEAELFGHE
                     RGAFTDAKESRMGLFEAAEGGFLFLDEVGDVELSLQGKLLKAVEERTVRRVGGNRDRK
                     IDVRILAATNRDLERESQRERFRRDLYFRLAVILLRLPPLRDRGDDVLTLAEYFLRRF
                     SAKYGKPVERLDPRARDRLLAYPWPGNVRELSHVIERAVLWSKGPLLDVEHLALEVPA
                     ELVDGAGTPVPDRAPRPAGMDLEQWERTLIEQALREADGNQTRAAQRLGVSRDT"
BASE COUNT          420 a         1082 c         1089 g          408 t
ORIGIN      
        1 ccggaccgcc gccgcgcgcg cgctcggcat cgggcgggcg acgttctacc gctggtggcg
       61 cgaggccggg ctcagcggct agcacggcat ccacgccccc cgtcccggcg ctccccccgg
      121 cgcacccgct ccgattccat ccgcccacgg cccgtcagga cgctcccgtg gaggatatgt
      181 ttgtgcggtg accttccagc gcaaactgct gctcggtttc tcgctcatgg tgctccccgc
      241 cctcctcgtc ggggccgagg ccatccgcag caaccggctg gagcgccgcg ccctcgacgc
      301 cctgggcgag agcatggccc gcacccgtac ctatgcggag ctggagacgg cgatgttcga
      361 ccagggcgag atcgtctggc gctacttgag cggcctcgat tccagcgccc gccgcgagtt
      421 cgacctcgcg ggcgaagtgg tggcctactg ggagggacgc tggcgcgcgg agctggaccc
      481 cggcgaggcc gacctcgccg aaggcgtcgt ccggatccag gccgacatcc gccgggtaac
      541 cgacagcgtg tttcgcctgg ccgatgcggg gcggcgaccg gaggccttcg ccctcgcgca
      601 acgggagctg aagggccgcc tgcagccggc gctcacccag atgaaccgcg aggtctatcg
      661 ccgggcgcgc gagtccagcg tgcggggcgc gtacgaccgg ctggaggaga tcctggccgg
      721 cgagggaaga accctcctgg tgatcatcgc cctcgccctc gccgtcggcc tggtcgcctc
      781 ctgggtcatc tcccgcggcc tgacccgccc gattcgagac ctcaccgggg cgatggcggt
      841 cgtgggctcg ggccagctgg accatccggt gacgcccacc tcgcgcgacg agatcgggga
      901 gctggccgcc gccttcgcgc ggatgaccga cagcctgcgg aggaacgtgc agcagctgga
      961 acgcacccag gcgcagctgg tccagtcgga gaagctggcg tccatcggcg agatgtcggc
     1021 ggcggtcgcc cacggactcc gcaacccgct cgcgagcctc cgcgccgccg cccagctggt
     1081 gcgccgccat cccgattcgc ccgccgccgg cgagcacctc gaggccatca tcggcgaggt
     1141 ggaccgcctc gaccggcgca tcagccatct cttgagcttc agccggccgg cccccttcca
     1201 ccccatcccc gagaagatcg accggctggt ggaagggctg ctccccgcct tcgcggagcc
     1261 gctgcgggag cacggcgtcg acctccggct ggagctcgcc cgggatctgc cggaggtcag
     1321 ggtagatccc atgcagctgg agcaggccct gctcgagctg gtctccaacg ccctggatgc
     1381 gatgccgacg gggggccggc tccggctgac gacccaggcg ggcgacgccg gggttccgcc
     1441 gagggaggtg gtggtcgagg tggccgacac cggcgggggc atcccggagc acgtgctgcc
     1501 tgcggtctgc gagcccttct tcaccacccg ggaggagggc accgggctcg gcctcgccat
     1561 cgccaagcgg ttcgtggagc agaacggcgg ccgcctggag atccagagca cgccgggagc
     1621 gggcacgacc gtgcgggtgc gcctgccggc gggagcggcg gcatgagcgc cacggtcctc
     1681 atcgtggacg acgagcggac cctggcccgc gcggtgaagg ccttcctgat cgagtcgggc
     1741 tacgaggccg aagtggcgcc cgatgccgaa caggcgctgg gcaggctgga gacgctgcgg
     1801 cccgacgtgg tcttctccga catgcggctc ccgggcatga acggcatcga gctgctccgg
     1861 cggatccggg agttcgaccc ggccatcgcc gtgatcatca tgaccgccta cggcaccatc
     1921 gaaggcgcgg tggaggcggt gaagctgggc gcgttcgact acctgaagaa gccggtggac
     1981 ctggaggagc tgaagctgct ggccgaccgg gccctggagc actcgcacct gcagctggag
     2041 ctgtcctacc accggcgccg cgcggcgagc gaggtgccct tcgcgtcggt cctgggcgaa
     2101 tcgccggcca tgcgggcggt gctggagcag gcgcgtcaga tcgccgcgct ggacgagacc
     2161 ccgccggtcc tcatcatggg cgagaccggc accgggaaag gcctggtggc ccgcaccatc
     2221 cacgccggca gcggccgcgc gtcccggccg ttcatcgagg tgaactgcac cgctctcccc
     2281 gcgacgctga tggaggccga gctgttcgga cacgagcggg gcgccttcac cgacgcgaag
     2341 gagtcgcgga tggggctgtt cgaggcggcg gagggcggct tcctctttct cgacgaggtg
     2401 ggcgacgtcg agctctcgct gcagggcaag ctgctcaagg ccgtcgagga gcgaaccgtg
     2461 cgccgggtcg gcggcaaccg ggaccggaag atcgacgtca ggatcctggc ggcgaccaac
     2521 cgggacctcg agcgcgagtc ccagcgggag cggttccgcc gcgacctcta ctttcgcctg
     2581 gccgtgattc tgctccggct ccctccgctc cgcgaccggg gtgacgacgt gctgaccctg
     2641 gccgagtact tcctccgccg gttcagcgcc aagtacggca agccggtgga gcggctcgac
     2701 ccccgcgccc gcgaccggct cctcgcctat ccctggccgg gcaacgtgcg cgagctcagc
     2761 cacgtgatcg agcgggccgt gctctggagc aagggccccc tgctggacgt cgagcacctc
     2821 gccctcgagg tgccggccga actcgtggac ggcgcgggga ccccggttcc cgaccgggcc
     2881 ccgcgcccag cgggcatgga cctggagcag tgggagcgga ccttgatcga gcaggcgctg
     2941 cgcgaagcgg acggcaatca gacccgcgcc gctcagcggt tgggcgtctc ccgcgacac
//
LOCUS       DASUYN010000256         2028 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1405042, whole genome shotgun sequence.
ACCESSION   DASUYN010000256 DASUYN010000000
VERSION     DASUYN010000256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2028)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2028)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2028
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1405042"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2028
                     /locus_tag="VF061_05060"
     CDS             <1..>2028
                     /locus_tag="VF061_05060"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX6668902.1"
                     /translation="LLAAQLQHPHVVPVLTAGDAAGLPWFTMPYVDGDSLRARLERGR
                     LGTGEVISILRDVARALAYAHAHGVVHRDIKPDNVLLSAGSATVTDFGIAKAITAART
                     GEGGRQATLTQVGTSIGTPTYMAPEQAAADPNADHRVDIYAFGVMAYELIAGQPPFQG
                     STPARLLAAHMTESPRDVRSIRSDVPPALAELIMACLAKDPEGRPQQAKELVRVLETV
                     TSSGDAAAVPAALRGGRIPTGKALAFWSVATAGVGVTAWAATDVIGLPDWVLPGSLGV
                     MLAGLPVIGITAFVQRTAHRVYTSTPQRTPGGGVTAPGTLATLALKASPHVSWRRTWL
                     GGGVAVGAFAVLVVGFMVTRAFGIGPAASLRGKGAFGARETVVVADFRGPAGDSTLGP
                     TVAEALRTDLAQSSSLNVLTRASVREILGLMQRPAESVVPFELAREIATREGAKAVLD
                     GEIVRLGQSYVVSARLVSALDGQELATFRETAANENDLIGALGDLSRSVREKAGESLR
                     TIRASSELERVTTPSLAALRKYVEGSALADEAGEPDRGLVLLEEAVTLDTAFAMAWRK
                     IAVILGNENRDQARALTAIATAFRHRERLTEQERLLTEGYYYTRGPKPDRERALAAYE
                     EAVRLDSTSTSALNNAGVVYGEKRDHERAEQVYRRVVALPRTFGGAFTNLLM"
BASE COUNT          272 a          739 c          735 g          282 t
ORIGIN      
        1 ctgctggccg cccagctgca gcatcctcac gtggtgcccg tgctcaccgc cggggacgcg
       61 gccgggctcc cctggttcac catgccctac gtggacggcg acagcctgcg cgcgcggttg
      121 gagcgggggc gcctcggcac cggtgaggtg atcagcatcc tccgcgatgt ggcccgagcc
      181 ctcgcctacg cccatgccca cggcgtggtt catcgcgaca tcaaaccgga caacgtcctc
      241 ctctccgccg gcagcgccac cgtcaccgac ttcggtatcg ccaaggcgat cacggccgca
      301 cgcaccggcg aagggggccg gcaggcgacc ctgacgcagg tcggcacctc catcggcacg
      361 cccacctaca tggcgccgga gcaggccgcg gcggacccga acgccgacca ccgggtggac
      421 atctacgcct tcggcgtcat ggcgtacgag ctgatcgccg gccagccgcc gttccagggc
      481 agcactccgg cgcggctcct ggccgcgcac atgaccgagt cgccccgcga cgtgcgctcg
      541 atccggagcg acgtccctcc ggccctggcc gagctgatca tggcgtgcct ggccaaggac
      601 cccgagggcc gtccccagca ggcgaaggag ctggtccggg tcctggagac ggtgacctcg
      661 agcggcgacg ccgcggccgt gcccgcggcc ctccgcggcg gtcgcattcc caccggcaag
      721 gcgctcgcct tctggtccgt cgcgaccgct ggggtcggcg tgaccgcgtg ggccgccacc
      781 gacgtcatcg gcctgcccga ctgggtgctg cccggctcgc tgggggtgat gctggccggc
      841 ctcccggtca tcggcatcac cgccttcgtg cagcgcacgg ctcaccgggt gtacacctcg
      901 acgccccagc ggacgcccgg tggcggggtc accgcgccgg ggacgctggc gacgctcgcc
      961 ctcaaggcga gtccgcatgt ctcctggcgc cggacctggc tgggaggagg cgtggccgtc
     1021 ggcgccttcg cggtgctggt cgtcgggttc atggtcacgc gagcgttcgg tatcgggccg
     1081 gcggcgtcgc tccggggcaa gggggcgttc ggggcgcggg agaccgtcgt ggtcgccgac
     1141 ttccgcggac cagccggcga ctccacgctg ggccccacgg tggcggaggc gctccgtacc
     1201 gacctggcgc agtcgagctc gctcaacgtc ctcacccgcg cgtcggtgcg ggagatcctg
     1261 ggactcatgc agcgcccggc tgagagtgtg gtgccgttcg agctggcgcg cgagatcgcg
     1321 acccgtgagg gcgcgaaggc ggtgctcgac ggcgagatcg tgcgcctggg gcagagctac
     1381 gtggtgtcgg cgcgactggt ttcggcgctc gatggccagg agctggccac cttccgggaa
     1441 acggcggcga acgagaacga cctgatcggt gcgctgggcg atctgtcccg ctcggtgcgg
     1501 gagaaggcgg gcgagtccct ccgtaccatc cgcgccagct ccgagctgga gcgggtcacc
     1561 accccgtccc tcgccgccct ccggaagtac gtcgagggtt ccgcgctcgc cgacgaggcg
     1621 ggcgagccgg accgcgggct ggtgctgctg gaggaggccg tcaccctcga cacggccttc
     1681 gcgatggcct ggcggaagat cgcggtgatc ctgggcaacg agaaccggga tcaggctcgc
     1741 gcgctcaccg ccatcgcgac cgccttccgg caccgcgagc ggctcaccga gcaggagcgg
     1801 ctgctcaccg agggttacta ctacacccgc ggccccaaac ccgatcgcga gcgcgccctc
     1861 gccgcctacg aggaggcggt ccggctcgac tccaccagca ccagtgcgct caacaatgca
     1921 ggggtggtgt acggcgagaa gcgcgaccat gagcgcgccg agcaggtgta ccggcgggtg
     1981 gtggcgctgc cgcgcacctt cggtggggcg ttcaccaatc tgctcatg
//
LOCUS       DASUYN010000257         8160 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1405303, whole genome shotgun sequence.
ACCESSION   DASUYN010000257 DASUYN010000000
VERSION     DASUYN010000257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8160)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8160)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8160
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1405303"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..375)
                     /locus_tag="VF061_05065"
     CDS             complement(<1..375)
                     /locus_tag="VF061_05065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017111 - ribonucleoside triphosphate
                     phosphatase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-triphosphatase"
                     /protein_id="HEX6668903.1"
                     /translation="MDPDLLLADLTAGNTAALARAISVVENGRPGFERLLAGVHRHLG
                     RARRIGITGPPGAGKSTLVERLVLAYRSAGLRVGVVAIDPTSPFTGGALLGDRIRMES
                     VALDDGVYIRSMASRGSLGGLAT"
     gene            complement(426..2093)
                     /gene="sulP"
                     /locus_tag="VF061_05070"
     CDS             complement(426..2093)
                     /gene="sulP"
                     /locus_tag="VF061_05070"
                     /inference="COORDINATES: protein motif:HMM:TIGR00815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015116 - sulfate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate permease"
                     /protein_id="HEX6668904.1"
                     /translation="MLVPKLVTTLRTYTRDQLAADAVAGVIVGVVALPLAIAFAIASG
                     VTPDRGLYTAVIAGFLVSALGGSRVQIGGPTGAFVVIVYGIVQRYGVDGLLAATLMAG
                     VILLILGLAKLGGAIKFIPFPVVTGFTAAIGVLIAIQQLRDALGLRMDAPPAELVERL
                     AAYAEHAGTVNPYAVGITAFTLLILFGWPRISRRIPSPLVALLAGTAAAQLLDLPVET
                     IGGRFGHIPSSLPSPVLPSVSFTELRELVGPAFAIATLGAIESLLSAVVADGMIGGRH
                     RSNMELVAQGVANIVSPLFGGMPATGAIARTATNIKSGGRTPVAGMVHALTLLLITLF
                     FGRWAELIPLAVLAGIVLVVAYHLSEWRVFVHELHAPKSDALVMVTTFLLTLLVDLTV
                     GIGVGMVLAAFLFMKRMSEVTNISIVRREFEEAGEAGQDDQGAIYRRQIPPGVEVYEI
                     NGPFFFGAAEKFKQTLGEVSQKPRVLVIRMRHVPAIDSTAMHALKDLVRRTRKQGTHV
                     LLSDVHSQPLIALGRSGLLDEIGEENLFGNVDEALEAARQRLQPASV"
     gene            complement(2128..3765)
                     /locus_tag="VF061_05075"
     CDS             complement(2128..3765)
                     /locus_tag="VF061_05075"
                     /inference="COORDINATES: protein motif:HMM:NF015094.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AarF/UbiB family protein"
                     /protein_id="HEX6668905.1"
                     /translation="MRALVVFFRLFPFVVGFLRDRRRFLVFGRALRRDDDRHRRRAVR
                     LTRTLAELGPAFIKLAQVFAARADILPEPYLSAIGTLTDQVPPLSPGVAEQVIREELQ
                     DDPAMIFDRFDPGPLAAASLGQVHRASYQGREVVVKVLRPGVEEVVRGDLDVSFRILF
                     LLNLLFPGHQVRAITAIVSEFSKRISDELDFRVEARNAATLKRNFAAEPRVVVPEVVP
                     ELVRQRVVVLEYVEGTRIDRLHQRLESGELRLDTLMTTLAEMYIKMMLEDGVFHADPH
                     AGNLLVDAQGRLVLLDFGMVLQVERETRRRLVEAVIAAARQDVDGLINAFYELGILDP
                     DVDRGTVRDAARSLMAITIREDVSHRQVQQLVEEVLQTFYEWPLMLPSNLVYFGRAAV
                     LVEGIGLRYDPRFNALAVTRPVLARSAGRLIQGVMEQDPRTRITDWTQEAIAAVRTLR
                     DVVRRVERDELRVRSHPRDTLELQRFLAQQVRRALLALFAFTVAVITSVLYLATRRLA
                     ILVPGLVLSFGMFLVIFLLPGHLFQNPLRFRRKWPGG"
     gene            complement(3777..5114)
                     /gene="mgtE"
                     /locus_tag="VF061_05080"
     CDS             complement(3777..5114)
                     /gene="mgtE"
                     /locus_tag="VF061_05080"
                     /inference="COORDINATES: protein motif:HMM:TIGR00400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HEX6668906.1"
                     /translation="MSASPDRVEWMVDLVRNGEITVFVRRAHDFEPADLADVLAALDE
                     DERVTVVQALPPELSSQALAELPEDAHAEHTLAALSPARAAEIVEELEDDDAAGILRE
                     LEPETQEAILQEVEDRAEVERLLRYEEETAGGRMTTHLVTVRDTATVAEALDEIRRQA
                     EEVEDFYQVFVVDGERRLVGVLPFKSLVVSRPGRQIHDFMEPADISVKPDLDQEEVAR
                     LMARYNLPSVAVLDDAGRLLGRVTFDDVIDVVEAETTEDLLKFGGVSPDEELAAPWTE
                     SVRSRLPWLYVNLVTACLAGGVVYFFRDTLQRTILLAVWMPIIAGMGGNAGTQALAVT
                     VRRLALGLIPEHRLLGVVGKEVLVGVTNGLAVGAVVGIVAALVGEQAMLGLVVFLAMT
                     VNLLVAGFAGAFTPIVLDRLGVDPAIASSIFVTTFTDTFGFLVLLGLAGWLLL"
     gene            complement(5111..6307)
                     /locus_tag="VF061_05085"
     CDS             complement(5111..6307)
                     /locus_tag="VF061_05085"
                     /inference="COORDINATES: protein motif:HMM:NF015436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HEX6668907.1"
                     /translation="MIWLVVATGLLIAAFGATSGAALITVSRAELTRAVGRRLRGATP
                     SLDWLARVDADLTAASATTSLGVLIVGAALPGLLAGSGTRLLVVLLALVGVPLVLLAA
                     YLIPRWLTLPRAQGVADRVMPVLRPWSRVLGVVLPARAAKRPTDLRAIWREGAAVGLP
                     ADDELVMVGGVMAFSVRPVREVMTPRTDIVAVDEDAALEDIRMVFAQSGYSRIPVYRG
                     TLDEIVGMLHAFDLFKLRPGDPLPVRPVAATPASRTCGDLLLDMQRERRHLAVVLDEF
                     GGTLGIATLEDLLEELVGEIFDEHDEEVRPEPPAGPTIFETDGNLPPEALEERFGVTL
                     PRGRSTTMAGLVVEWAGRIPNAGERFLVRGLEIDVLEASPTRIDRLVVRSADTPAAPL
                     PDASTS"
     gene            complement(6304..7497)
                     /locus_tag="VF061_05090"
     CDS             complement(6304..7497)
                     /locus_tag="VF061_05090"
                     /inference="COORDINATES: protein motif:HMM:NF015436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HEX6668908.1"
                     /translation="MIAFLQLFLAPLVAAALTLWAAWLTLAAESDADLPRALSGDDVA
                     EAEGGSLSRHLHVAHLALLVLAGAAAGAAVAWWARSPTGGLIRLVAAIGLVWIVGDLL
                     PRIVGAVAPELTRPARRGAAATLAPLRPFLRLASWADTKARGRIPANGSRNAGPAERD
                     MLLGVFSLAGTTVAEVMTPRIDIVAVDSSATRDEVIATLRRSEHARLLVYDGHPDAVA
                     GVIYAKDILAGSEEGGPWTAAIRPAGFVPEGKSLDRQLRDFQRGPSHLAVVVDEFGGT
                     AGLVTLEDILEQIVGEIQDEYDTDEVAPIQVVGPDQLRVEGGVALSELESVLGHSFAR
                     EDVSTVGGLVLAEFGRVPRSGESVDMQGYRLTVEQVVRRRVRRVGVQRIAEMAPVGET
                     ARAAP"
     gene            complement(7494..7910)
                     /gene="ybeY"
                     /locus_tag="VF061_05095"
     CDS             complement(7494..7910)
                     /gene="ybeY"
                     /locus_tag="VF061_05095"
                     /inference="COORDINATES: protein motif:HMM:TIGR00043.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HEX6668909.1"
                     /translation="MREVVVSGRRLPLPPALVRRVVARVLDGERRDGLISVTFLGRDA
                     MRRLNAAHKGRDTPTDVLAFAMTDGTGLAVGDVYVCSWVAAREAKARGVSLREELIRL
                     LVHGTLHALGRTHPEGESRTRSPMWRRQERYVGALA"
     gene            complement(7903..>8160)
                     /locus_tag="VF061_05100"
     CDS             complement(7903..>8160)
                     /locus_tag="VF061_05100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668910.1"
                     /translation="MLADSAEAVVRVLDDRTPERVREAIEQLVAQKLASGQLDDAPLS
                     LVDLDRIKREFARVMSGTYHKRTGYPRAAGATPELETAERA"
BASE COUNT         1264 a         2965 c         2918 g         1013 t
ORIGIN      
        1 ggtcgccagg ccgcccaggg agccgcggct cgccatcgag cggatgtaga cgccgtcgtc
       61 cagggccacg gattccatgc ggatgcggtc gcccagcagg gcgccgccgg tgaagggact
      121 ggtgggatcg atcgcgacga cgccgacgcg gaggcccgcc gagcggtagg cgaggaccag
      181 gcgctccacc agcgtggact tgccggcgcc gggcggcccg gtgatcccga tgcgccgggc
      241 ccggccgagg tggcggtgca cccccgcgag caggcgctcg aatcccggcc ggccgttctc
      301 gaccaccgag atcgcccgcg ccagcgcggc cgtgttgccg gccgtcaggt ccgcgagcag
      361 gaggtccgga tccatggccg aaaagtcgcc ccggacccgg ggtcaggcaa gccgaacgcc
      421 cggagtcaca ccgaggcggg ctgcaaacgc tggcgcgccg cttccagcgc ctcgtccacg
      481 ttcccgaaga ggttctcctc gccgatctcg tccagcaggc ccgatcgtcc cagggcgatc
      541 agcggctggg aatggacgtc gctcagcagc acgtgagtcc cctgcttccg cgtgcgccgg
      601 accaggtcct tgagcgcgtg catcgcggtg gagtcgatcg ccggcacgtg gcgcatccgg
      661 atcaccagca cccgcggctt ctgcgacacc tcgcccagcg tctgcttgaa cttctccgcc
      721 gcgccgaaga agaaggggcc gttgatctcg tagacctcca ctccgggcgg gatctgtcgc
      781 cggtagatgg cgccctggtc gtcctgtccg gcctcgccgg cctcctcgaa ctcccgccgc
      841 acgatgctga tgttggtgac ctccgacatc cgcttcatga agaggaaggc ggccagcacc
      901 atcccgacgc cgatgccgac ggtcaggtcc accagcaggg tgaggagaaa ggtggtgacc
      961 atgaccaggg cgtcgctctt gggcgcgtgc agctcgtgca cgaacacccg ccactcgctc
     1021 aggtgatacg ccaccaccag cacgatgccg gcgagcacgg ccaggggaat gagctccgcc
     1081 caccggccga agaacagggt gatgaggagc agggtgagcg cgtggaccat gcccgccacg
     1141 ggcgtgcgcc cgccgctctt gatgttggtc gccgtccgcg cgatggcgcc ggtggccggc
     1201 atgccgccga acagcggcga gacgatgttg gccacgccct gggccacgag ctccatgttg
     1261 gagcgatgcc ggccgccgat catgccgtcg gccaccaccg cggagagcag cgactcgatc
     1321 gcgcccaggg tggcgatggc gaacgccggc cccaccagct cgcgaagctc cgtgaaggac
     1381 acggagggca ggaccgggga cggcagcgac gacgggatgt ggccgaagcg accgccgatg
     1441 gtctccaccg ggaggtccag cagctgcgcg gcggcggtcc cggccagcag ggcgacgagc
     1501 ggcgaaggga tgcgacggct gatgcgcggc cagccgaaca ggatcagcag ggtgaaggcg
     1561 gtgatgccga ccgcgtaggg attcacggtc cccgcgtgct ccgcataggc ggcgagccgc
     1621 tcgaccagct ccgcgggcgg cgcgtccatc cggaggccca gggcatcccg cagctgctgg
     1681 atcgcgatca ggacgccgat cgccgccgtg aagccggtga ccaccggaaa ggggatgaac
     1741 ttgatcgccc cgcccagctt ggcgagaccc agtatgagga ggatgacccc ggccatcagc
     1801 gtggcggcca agagcccgtc cacgccgtag cgctgcacga tcccgtacac gatcaccacg
     1861 aaggcgcccg tgggaccgcc gatctgcacc cgggagccgc cgagggcgga gacgaggaat
     1921 ccggcgatga ccgcggtgta cagcccccgg tcgggcgtga ccccgctggc gatggcgaac
     1981 gcgatcgcca gcgggagcgc caccaccccg acgatgacgc cggcgacggc gtcggcggcg
     2041 agctggtcgc gggtgtaggt cctgagcgtg gtcaccagct tggggacgag caaccggtct
     2101 cctgggttcg agcggtgtgg ggctaggcta ccctcccggc cacttgcgcc ggaagcggag
     2161 cgggttctgg aacaggtgac cgggcagcag gaagatgacc aggaacatcc cgaacgagag
     2221 caccagcccg ggcaccagga tggcgagccg ccgggtggcc aggtagagca cgctggtgat
     2281 caccgcgacg gtgaaggcga acagcgccag gagcgcccgg cggacctgct gggccaggaa
     2341 ccgctggagc tccagggtat cgcgcgggtg agagcgcacc cggagctcgt cgcgctccac
     2401 ccggcgcacc acgtcgcgga gggtccgcac cgccgcgatg gcctcctggg tccagtcggt
     2461 gatccgggtg cgcgggtcct gctccatcac cccctggatc agccggcccg cggagcgggc
     2521 cagcaccggc cgggtgaccg cgagcgcgtt gaaccgcggg tcgtagcgga gcccgatccc
     2581 ctccaccagc acggcggccc gaccgaagta caccaggttg gacggcagca tcagcggcca
     2641 ctcgtagaag gtctggagca cctcctcgac cagctgctgg acctggcggt gggagacgtc
     2701 ctcgcggatg gtgatcgcca tgaggctccg cgcggcgtcg cgcacggtgc cccggtccac
     2761 gtcgggatcg aggatgccca gctcgtagaa ggcgttgatg aggccgtcca cgtcctggcg
     2821 cgcggcggcg atcacggcct ccaccagccg ccgccgcgtc tcccgctcca cctggagcac
     2881 catcccgaag tccagcagca ccaggcggcc ctgcgcatcc accaggaggt tgccggcgtg
     2941 gggatcggcg tgaaagacgc cgtcctccag catcatcttg atgtacatct ccgccagcgt
     3001 ggtcatcagc gtatcgagcc gcagctctcc ggactcgagc cgctggtgca gccggtcgat
     3061 gcgggtcccc tccacgtact ccaggaccac cacccgctgg cgcaccagct cgggcacgac
     3121 ctcgggcacc accacccgcg gctcggcggc gaagttgcgc ttcagggtcg ccgcattccg
     3181 ggcttccacc cggaagtcga gctcgtccga gatccgcttg gagaactcgc tcacgatcgc
     3241 ggtgatcgcg cggacctggt gaccggggaa caggagattc agcaggaaga ggatccggaa
     3301 ggagacgtcg agatcgccgc ggaccacctc ctccactccg ggccggagca ccttcaccac
     3361 gacctcgcgg ccctggtagg acgcgcggtg cacctgtccc agcgacgccg cggccagcgg
     3421 cccggggtcg aaccggtcga agatcatcgc gggatcgtcc tgcagctcct cccggatgac
     3481 ctgctcggcg acgcccgggc tcagcggcgg cacctgatcg gtcagggtac cgatggcgga
     3541 caggtagggc tcgggcagga tgtccgcgcg tgcggcgaag acctgggcca gcttgatgaa
     3601 cgcggggccc agctcggcca gggtgcgggt gagccgcacg gcgcggcggc ggtggcggtc
     3661 gtcgtcgcgc cggagcgcgc ggccgaacac caggaagcgc cggcgatcgc ggaggaagcc
     3721 gacgacgaac gggaagagac ggaagaagac gacgagggcg cgcactcagc gcgacctcag
     3781 agcagcagcc atcccgccag gccgaggaga accaggaagc cgaaggtgtc ggtgaaggtg
     3841 gtgacgaaga tcgaggacgc gatcgcggga tccacgccga ggcggtccag cacgatggga
     3901 gtgaacgcgc cggcgaaccc cgccaccagc aggttcaccg tcatggcgag aaacaccacc
     3961 agcccgagca tggcctgctc gcccaccaac gccgcgacga tgccgaccac cgcccccacc
     4021 gcgagcccgt tggtgacccc gaccaggact tccttgccca ccacgcccag caggcggtgc
     4081 tcggggatga ggccgagcgc gagccgccgg acggtcacgg ccagcgcctg ggttccggcg
     4141 tttcctccca tgccggcgat gatcggcatc cacaccgcga ggaggatcgt gcgctgcagc
     4201 gtgtcccgga agaagtacac cacgccgccg gcgaggcagg cggtgaccag gttgacgtag
     4261 agccagggca gccggctccg caccgactcc gtccacgggg cggccagctc ctcgtcgggg
     4321 gagacgccgc cgaacttgag caggtcctcc gtggtctccg cctcgaccac gtcgatcacg
     4381 tcgtcgaagg tcacccgccc cagcagccgc ccggcgtcgt ccagcaccgc gacgctggga
     4441 aggttgtagc gggccatgag ccgggcgacc tcttcctgat cgaggtctgg cttgaccgag
     4501 atgtcggcgg gctccatgaa gtcgtggatc tggcgccccg gccggctcac caccaggctc
     4561 ttgaacggga ggacgccgac caggcgccgc tcgccgtcca ccacgaacac ctggtagaag
     4621 tcttccacct cctccgcctg ccgccggatc tcgtccagcg cttccgccac ggtggcggtg
     4681 tcccggacgg tgaccaggtg ggtggtcatc cgcccgccgg cggtctcctc ctcgtaccgg
     4741 agcagccgct cgacctcggc gcgatcctcg acctcctgga ggatcgcctc ctgggtctcc
     4801 ggctccagct cgcggaggat ccccgccgcg tcgtcgtcct ccagctcctc gacgatctcc
     4861 gccgcgcgcg cgggactcag cgccgccagg gtgtgctccg cgtgcgcgtc ctccggcagc
     4921 tccgccagcg cctggctgga gagctcgggg gggagcgcct gcaccaccgt gacccgctcg
     4981 tcctcgtcca gcgcggccag cacgtcggcc aggtcggccg gctcgaagtc gtgcgcccgc
     5041 cgcacgaaga cggtgatctc gccgttgcgg acgagatcca ccatccactc gacgcggtcg
     5101 ggcgaagcgc tcacgaggtc gaggcgtccg ggagtggagc cgccggcgtg tccgccgagc
     5161 ggacgaccag ccggtcgatc ctggtgggcg aggcctcgag gacgtcgatc tccagccccc
     5221 gcaccaggaa ccgctccccc gcgttgggaa tgcggcccgc ccactcgacc accaggccgg
     5281 ccatggtggt cgagcggccg cggggcagcg tcaccccgaa ccgctcctcg agggcctcgg
     5341 gcgggaggtt gccgtcggtc tcgaagatgg tgggaccggc gggcggctcg ggccgcacct
     5401 cctcgtcgtg ctcgtcgaag atctcgccca ccagctcctc gagcaggtct tccagggtgg
     5461 cgatgccgag cgtgcccccg aactcgtcga gcacgacggc caggtgccgc cgctcacgct
     5521 gcatgtcgag cagcaggtcg ccgcaggtcc ggctcgccgg cgtggccgcc acgggccgca
     5581 ccggcagcgg atcgccgggg cgcagcttga agaggtcgaa cgcgtgcagc atgcccacga
     5641 tctcgtcgag cgtgccccgg tagaccggga tccggctgta gccgctctgg gcgaacacca
     5701 tccggatgtc ctccagcgcc gcgtcttcgt ccaccgccac gatgtcggtg cgcggggtca
     5761 tcacctcgcg caccgggcgg acgctgaagg ccatcacgcc gcccaccatc accagctcgt
     5821 catcggcggg cagcccgacg gcggccccct cccgccagat ggcgcggagg tcggtgggtc
     5881 gcttggccgc gcgcgccggc agcaccacgc cgagcacccg gctccagggt cggaggaccg
     5941 gcatcacccg atccgcgacc ccctgcgccc gaggcagcgt gagccagcgg gggatgagat
     6001 acgccgcgag cagcaccagg gggacgccca ccagcgccag gagcacgacc agcagccgtg
     6061 tgcccgagcc cgccagcagc ccgggaagcg ccgcccccac gatcagcacg ccgagggagg
     6121 tggtggcgga ggcggcggtc agatcggcgt ccacccgcgc cagccagtcg agcgagggtg
     6181 tggcgccacg aaggcgccgg cccaccgccc gggtgagctc cgcgcgactc accgtgatga
     6241 gcgccgcgcc ggaggtggcg ccgaacgccg cgatgagcag tcccgtggcc acgaccagcc
     6301 agatcatggg gcggccctcg cggtctcgcc caccggcgcc atctcggcga tccgctgcac
     6361 cccgacgcgg cgcacccggc gccgtaccac ctgctccacc gtgagccggt agccctgcat
     6421 gtccacgctc tcgcccgagc gggggacgcg gccgaactcg gccagcacca gcccaccgac
     6481 ggtgctcacg tcctcccggg cgaagctgtg gcccaggacg ctctcgagct cggacagcgc
     6541 gacgccgccc tcgacccgaa gctggtccgg acccacgacc tggatcggcg cgacctcgtc
     6601 ggtgtcgtac tcgtcctgga tctcgccgac gatctgttcc aggatgtcct ccagcgtcac
     6661 caggccggcg gtgccgccga actcgtccac cactacggcg aggtggctgg gcccgcgctg
     6721 gaagtcacgg agctggcggt cgaggctctt cccctcgggc acgaagccgg cgggccggat
     6781 cgccgccgtc catggtccgc cttcctcgct gccggcgagg atgtccttgg cgtagatgac
     6841 gccggcgacg gcgtcgggat ggccgtcgta caccaggagc cgcgcgtgct ccgagcggcg
     6901 cagcgtggcg atgacctcgt cccgcgtggc ggaagaatcc accgccacga tatcaatccg
     6961 gggggtcatc acctcggcca cggtggtgcc cgccagtgag aagacgccca gcagcatgtc
     7021 ccgctcggcg ggcccggcgt tgcgggagcc gttcgcgggg atgcggcccc gggccttggt
     7081 gtcggcccag ctcgccaggc ggaggaacgg acgcagcggc gccagcgtcg cggcggcccc
     7141 gcggcgcgcg ggacgggtga gctcgggcgc gaccgcgccc acgatgcggg gcagcaggtc
     7201 gcccacgatc cagaccagcc cgatcgccgc caccagccgg atgagtccgc ccgtggggga
     7261 gcgcgcccac caggccacgg ccgcgccggc cgcggcgccg gcgagcacca gcaaggcgag
     7321 gtgggcgacg tgcaggtggc gggacaggga gccgccctcc gcctcggcca cgtcgtcgcc
     7381 gctcagcgcg cgggggaggt cggcgtcgga ctccgccgcg agggtgagcc acgcggccca
     7441 gagcgtgagg gcggcggcca ccagcggggc gaggaagagc tggagaaacg cgatcacgcc
     7501 agcgctccga cgtaacgctc ctgccggcgc cacatggggg agcgggtgcg actttcgccc
     7561 tcggggtggg tccgtcccag ggcgtggagg gtgccgtgca ccagcaggcg gatcagctcc
     7621 tcccgcagcg atacgccccg cgccttcgcc tcccgcgccg ccacccagga gcagacgtac
     7681 acgtcgccga ccgccaggcc ggtgccgtcg gtcatggcga atgcgagcac gtcggtgggg
     7741 gtgtcccggc ccttgtgcgc ggcgttcaac cgtcgcatcg cgtcccggcc gagaaaggtg
     7801 acggagatga gcccgtcgcg gcgttcgccg tcgagcacgc gagccaccac ccgtcgaacc
     7861 agcgccggcg ggagcggaag gcggcggccg ctgaccacca cctcacgcac gctcggccgt
     7921 ctcgagctcc ggcgtggcgc cggcggcacg ggggtacccg gtgcgcttgt ggtaggtgcc
     7981 ggacatcacc cgggcgaact cccgcttgat ccggtcgagg tccaccaggc tgagcggcgc
     8041 gtcgtcgagc tggccggagg cgagcttctg ggcgaccagt tgctcgatcg cctcgcgcac
     8101 ccgttccgga gtccggtcgt cgagcacccg caccaccgcc tcggccgagt cggccagcat
//
LOCUS       DASUYN010000258         4513 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_524784, whole genome shotgun sequence.
ACCESSION   DASUYN010000258 DASUYN010000000
VERSION     DASUYN010000258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4513)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4513)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4513
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_524784"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..353)
                     /locus_tag="VF061_05105"
     CDS             complement(<1..353)
                     /locus_tag="VF061_05105"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX6668911.1"
                     /translation="MDTQELQQVALFEKCRQFTKAREIQAAGLYPYFNPISESEDTVV
                     VIDGHKRIMLGSNNYLGLTHHPKVLEAASRALHRYGSGCTGSRFLNGTLDLHEQLENA
                     LAEFLGKEACLVFSTG"
     gene            725..1225
                     /locus_tag="VF061_05110"
     CDS             725..1225
                     /locus_tag="VF061_05110"
                     /inference="COORDINATES: protein motif:HMM:NF024892.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate oxidation carrier protein SoxY"
                     /protein_id="HEX6668912.1"
                     /translation="MSHDVPPRRAFLRGALLAATGLIGSGTVLEQGRLLADWVGDPDP
                     EVPNEEVARILRGITGGKPIKRGHLSLDMPVAAEDGRIVPVIIESDLPMTPERYVKAI
                     HLIVDHNPDAHLAAFHLSPAIGSVSISTRIKMKRTTWVRALAQTSDGEIWAAYTRVQV
                     LLNGCG"
     gene            1225..1560
                     /gene="soxZ"
                     /locus_tag="VF061_05115"
     CDS             1225..1560
                     /gene="soxZ"
                     /locus_tag="VF061_05115"
                     /inference="COORDINATES: protein motif:HMM:NF020350.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate oxidation carrier complex protein
                     SoxZ"
                     /protein_id="HEX6668913.1"
                     /translation="MSGIGEARIRVPDRVTRGELIVVNAIISHPMDTGFFRDADGKPI
                     PAYFIKDVVVTYGDQEVARFRWTSGISRDPIISFTLRADREAPLTMTWTDNKGDVFKQ
                     SAAITFASA"
     gene            1665..2495
                     /locus_tag="VF061_05120"
     CDS             1665..2495
                     /locus_tag="VF061_05120"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX6668914.1"
                     /translation="MGDTGRGVEGRPNAGFIVTAEGVVVIDALASPRQGEQLLRAIRG
                     ITDQPVKWLVLTHHHPDHHFGAVVLRKAGARVIAHPDRRVLAAEGGEDALIADWVRVV
                     GLDAMRGFEFANTPDRPVTVADTLRLGGKSIVVSHPGAGHSAGDLLVWLPGERVLFAG
                     DVLVEDGVSMVVDGNSYELLRVLGLVDSLGAAIVVPGHGAIPARPAELVRRTREYLTR
                     LQAEMRAAVEKAVPMRRALAALPPADSTRPVSLDSRRRRNAARVYVEEERKYMGLDEP
                     "
     gene            2492..3430
                     /locus_tag="VF061_05125"
     CDS             2492..3430
                     /locus_tag="VF061_05125"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HEX6668915.1"
                     /translation="MIRLIRVAGAAYLAGLALACGSARTAPDTRAAPAASLPGIVSTD
                     TLAAWMQRDEVMLVDIRTDVFAYLRGHLPGAAYINTETLRATRGGIPTQLLDGGAYAA
                     LFSRMGLPYDRPVVIYSAGETHNIDATFLAWLLAGFGHPRVFVLDGGYFKWQLEQRPV
                     VGEYPRLPPTAFPAGPFRPEQASLEDVRRALEIGDAILVDARPPDQYAGEAGAQMRRG
                     HIPGAINHYWRDDLAREGFGYVWRPRDELRASYVEQGITPDRDIIAYCNSATEASHVH
                     FTLRYLLGYPRVRVYVGSWTEWAERRELPLETGRTP"
     gene            complement(3427..>4513)
                     /locus_tag="VF061_05130"
     CDS             complement(3427..>4513)
                     /locus_tag="VF061_05130"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX6668916.1"
                     /translation="LRDLLAQGITSVRDMGTDPAALLARVRAFQAAPRVHAMQLVAGR
                     RFFFNGFHATRTARGTIYRQPPAIAMQQLGWRPLQFNPGDDPDALVAEARKAGAMGLK
                     LYAQMDSGSVRQLTEAAHRADMPVWGHAWVQPASVREQATAGQDGVVHAAGLAGELFT
                     VEDRDTLVRDGDLQAATAEVATVGAALDPRVLAALDTMARHGVMLEPTLDAVRQSVRS
                     YDAKLRHIPSLQEEYVRSASRFGMEVARQAVKRGVRISAGSDHVSYGPVADRATLFGE
                     LQLLVDSLDMSPTAALLAATRDAARAIGGQPGRQIGTIQKGRYADLVLLSRDPLEDIA
                     NLEHVELVMIGGKLWRPGQLRSGIAMN"
BASE COUNT          664 a         1586 c         1583 g          680 t
ORIGIN      
        1 ccagtggaga agacgagaca ggcttccttg cccaggaact ccgccagggc gttctccagc
       61 tgctcgtgca ggtcgagcgt tccgttgagg aaccggctgc cggtgcagcc cgagccgtag
      121 cggtggaggg cgcgggaggc cgcctccaga accttcgggt gatgggtgag gcccagataa
      181 ttgttggacc ccagcatgat ccgtttgtgg ccgtcgatga cgacgacggt gtcttccgac
      241 tccgagatcg gattgaagta gggatagaga ccggcggcct ggatctcccg ggccttggtg
      301 aactgccggc acttctcgaa gagcgcgacc tgttgaagct cttgggtatc cacgggacct
      361 cggagcaggg aggaggtgac cattgtcccc cacatcgctt tgtggctgaa ggatttaaac
      421 tagtaagccc ggtcgggtga cacaagttgc agaccggcct ggaagggcac cgaaaggagt
      481 cggaaatgcc tcgcaatcct cgcgccgcgg cggcctcctt tccggggcgg tccagccgtc
      541 gcggaccgaa agggttgcga cggttcagct tgggccatcc ggacccgctc cggcgtcacc
      601 ggcaggccgg tcgggcaccg tcctccggtg gcggaacgac gaccggtgac tgtccctcca
      661 ggggatcgcc tggccttccc cattgcttga cttgctcgca gcgggggaag acttttcctt
      721 cactatgtcg cacgatgtgc ctccgcgccg cgcgtttctc cgaggtgccc tcctcgccgc
      781 caccggtctg atcggatccg gcacggtgct cgagcagggc cggctgctgg ccgactgggt
      841 cggggacccc gaccccgaag tgcccaacga ggaagtcgcc aggatcctgc gggggatcac
      901 cggcggcaag cccatcaagc gcggccacct gtcgctggac atgccggtcg cggcggagga
      961 cgggcggatc gtgccggtga tcatcgagag cgatctcccg atgacgcccg agcggtacgt
     1021 gaaggcgatc cacctgatcg tggatcacaa tcccgacgcc catctcgccg cgttccacct
     1081 gagcccggcc atcgggtcgg tgtccatctc cacccggatc aagatgaagc gcaccacctg
     1141 ggtgcgcgcg ctggcgcaga ccagcgacgg cgagatctgg gcggcctaca cccgggtgca
     1201 ggtcctgctg aacgggtgcg gctgatgagc ggcatcggcg aggcccgcat ccgggttccc
     1261 gaccgggtga ccaggggcga gctgatcgtg gtgaacgcga tcatctccca cccgatggac
     1321 accggcttct tccgtgacgc ggacggcaag ccgatcccgg cgtacttcat caaggacgtg
     1381 gtggtcacct acggcgacca ggaggtcgcg cggttcaggt ggacgtcggg tatcagccgc
     1441 gatcccatca tcagcttcac cctgagggcc gaccgcgagg ccccgctcac catgacctgg
     1501 accgacaaca agggcgacgt gttcaagcag tcggccgcca tcacgttcgc ttccgcctga
     1561 tccgcacgag cctcccactc ctcgcaccac tgctggcatt cgcctccgcc gccgtcggcg
     1621 gggagcttcc catccgtgag ctcgcgcccg atgtctacgc cgtcgtgggc gacaccggcc
     1681 gcggggtgga gggtcggccc aacgccgggt tcatcgtgac ggccgagggc gtggtggtga
     1741 tcgacgcgct ggcgagcccc cgccagggag agcagttgct ccgggccatt cgcggcatca
     1801 ccgaccagcc ggtcaaatgg ctggtgctca cccatcacca ccccgatcat cacttcggcg
     1861 cggtggtcct gcggaaggcc ggcgcccggg tgatcgccca ccccgacagg cgggtgctcg
     1921 ccgccgaggg gggagaggac gccctcatcg cggactgggt gcgcgtggtc ggtctcgacg
     1981 cgatgcgggg cttcgagttc gccaatacgc cggaccggcc ggtcaccgtc gccgacaccc
     2041 tgcggctcgg cggaaagtcc atcgtagtca gtcacccggg ggcggggcac tccgcggggg
     2101 acctgctggt gtggctgccc ggcgagcggg tgctgttcgc cggcgacgtg ctggtcgagg
     2161 acggggtgag catggtggtg gacggcaact cgtacgagct gctgcgggtc ctggggctgg
     2221 tcgactcgct gggcgcggcc atcgtggtgc cggggcacgg cgccattccc gcgcgcccgg
     2281 cggagctggt ccggcggacc cgcgagtacc tgacgcgcct ccaggcggag atgcgcgcgg
     2341 cggtagagaa ggccgtgccg atgcgacggg ccctcgccgc cctcccgccg gcggactcga
     2401 cccggcccgt ctcgctcgac tcccgccggc gccggaacgc ggcccgcgtc tatgtggagg
     2461 aggagcggaa gtacatgggg ctcgacgagc cgtgatccgc ctgatccggg tcgccggcgc
     2521 cgcgtacctg gcgggcctcg ccctcgcctg cggctcggct cgcaccgcgc cggatacccg
     2581 agccgccccc gccgcgtccc tcccgggcat cgtctccacc gatacgctcg cggcctggat
     2641 gcagcgtgat gaggtgatgc tggtggacat ccggaccgac gtcttcgcct acctgcgcgg
     2701 ccatctgccg ggcgcggcct acatcaacac cgagacgctg cgcgccacgc ggggcggcat
     2761 ccccacccag ctcctcgacg gcggcgccta cgccgcgctc ttctccagga tggggctgcc
     2821 ctacgaccgg cccgtggtca tctacagcgc gggcgagacc cacaacatcg acgcgacctt
     2881 cctcgcctgg ctgctggccg ggttcggcca cccgcgggtc ttcgtcctgg acggcggata
     2941 cttcaagtgg cagctggagc agcggccggt cgtgggggag tatccgcgac tccccccgac
     3001 cgcgttcccg gccggcccgt tccggccgga gcaggcttcg ctggaggacg tccgccgcgc
     3061 actcgagatc ggcgatgcga tcctggtgga cgcccggccc cccgaccagt acgccggcga
     3121 ggccggtgcg cagatgcgcc gggggcacat cccgggggcg atcaatcact actggaggga
     3181 cgatctcgcg cgggagggct tcggctacgt ctggagaccg cgcgacgagc tgcgcgcgag
     3241 ctacgtcgag caggggatca cgccggacag ggacatcatc gcctactgca acagcgccac
     3301 ggaggccagc cacgtgcact tcaccctgag atacctgttg gggtatccca gggtgcgggt
     3361 gtacgtcgga tcctggaccg agtgggccga gcggcgggag ctgccgctcg agaccggccg
     3421 taccccttag ttcatcgcga tccccgaccg cagctgcccc ggtcgccaga gcttcccgcc
     3481 gatcatcacc agctcgacgt gctcgaggtt cgcgatgtcc tcgagcgggt ccctggagag
     3541 cagcaccagg tcggcgtaac gtcccttctg gatggtgccg atctgccgcc ccggctggcc
     3601 gccgatggcg cgggccgcgt cgcgggtggc ggcgagcagc gcggcggtgg gcgacatgtc
     3661 gagcgagtcc accagcagct ggagctcgcc gaacagcgtc gcgcggtcgg ccaccggccc
     3721 gtaggagacg tgatcgctcc cggcgctgat gcggacgccg cgcttcaccg cctgccgcgc
     3781 gacctccatg ccgaagcgtg acgccgagcg gacgtactcc tcctggaggg aggggatgtg
     3841 ccgcagcttg gcgtcgtagg accgcacact ctgccgcacc gcgtccagcg tcggctccag
     3901 catgacgccg tgccgcgcca tggtatcgag cgccgccagc acccgcgggt cgagcgccgc
     3961 gccgacggtc gccacctcgg cggtggcggc ctggagatcc ccgtcgcgta ccagggtatc
     4021 ccgatcttcc accgtgaaca actcgcccgc gagcccggcc gcgtggacca cgccatcctg
     4081 gcccgcggtc gcctgttccc ggacgctggc cggctgcacc caggcgtggc cccacaccgg
     4141 catgtcggcg cgatgcgccg cctcggtgag ctggcggacc gacccggaat ccatctgcgc
     4201 atagagcttg agccccatcg cgcccgcctt tcgcgcctcc gcgaccagcg cgtcgggatc
     4261 gtcgcccggg ttgaactgga gcggccgcca gcccagctgc tgcatcgcga tcgccggcgg
     4321 ctgccgatag atcgtgcccc gcgcagtgcg ggtggcgtgg aatccgttga agaagaaccg
     4381 gcggccggcg accagctgca tcgcgtgcac ccggggagca gcctgaaacg cacggacccg
     4441 ggcgagcagc gcggcgggat cggtgcccat gtcccggacc gaggtgatgc cctgcgccag
     4501 aagatcgcgc agg
//
LOCUS       DASUYN010000259         2656 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1406099, whole genome shotgun sequence.
ACCESSION   DASUYN010000259 DASUYN010000000
VERSION     DASUYN010000259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2656)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2656)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2656
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1406099"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..422)
                     /locus_tag="VF061_05135"
     CDS             complement(<1..422)
                     /locus_tag="VF061_05135"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012616.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA adenine dimethyltransferase family protein"
                     /protein_id="HEX6668917.1"
                     /translation="MPRAKRRLGQHFLTDPRILQRLADALDATADDTVLEIGPGPGTL
                     TEALAGRVGKLVAIEKDGDLVPALRARVPGATVVEADALEADWHALAGPDFLVAGNIP
                     YNITSPLIDKALEPPRPRRIVFLVQKEVADRVGAAPGSG"
     gene            complement(424..1953)
                     /locus_tag="VF061_05140"
     CDS             complement(424..1953)
                     /locus_tag="VF061_05140"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing SpoIIE family protein
                     phosphatase"
                     /protein_id="HEX6668918.1"
                     /translation="MRLWRFDGRALKPAGGAPDPGWSPTMPREAGLVPTPDGSAWLAP
                     VNTLEGFWVEVDAGTEDRSRSAADRVLPIVAAVLDTERQRGFMAEELASRYQEIDLLY
                     AISEILGTTVRLEEATRTIVREVSTVVGAKRASIMVVDEAARVLRTVAARGFGVEGLA
                     PVPVDDECSVAARVYREQRTIVYDPAEADGAPGDCGGDRGYLGRAYLSVPICYGAPNS
                     PLRCIGVINLTDRIGGDRFTPGDRKLVAAVANQIGAAVENARLVERDLRQQQLRRELQ
                     LAHDLQLKLLPSPAVLHGDAEVAARCLPAESVGGDFYTFARLGRGRVGVMLGDVASHG
                     FSAALVMALVLSAAGIHAAASVTPDETLSALLDSLSTELAETEMYFSVFYGVLDPLGG
                     RLDYASAGHPYAFRVPRFGEPERLETTAPPLGLATAGSIQRRQLPWSVGHDLLVLWTD
                     GMVDARNEAGEPFGDQRLLAEVCARRSEPAEAIVQAVLAAAEAFGGEPVDDRTLLVLR
                     I"
     gene            complement(2004..2468)
                     /locus_tag="VF061_05145"
     CDS             complement(2004..2468)
                     /locus_tag="VF061_05145"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX6668919.1"
                     /translation="MTSPLRLCVRRSPAQDAEGAATLVSVRLPSDVGCIEEAVELVTR
                     HCLAGHVATRTIRFRLQVVLSEALANAILRGNRESLDKWVDVRAELREDIIRVHVTDE
                     GPGFDPGSVPEPIEPEQLDEAGGRGLFLIRKLVDAVQFNEQGNSICMILRRH"
BASE COUNT          360 a          982 c          954 g          360 t
ORIGIN      
        1 ccgctcccgg gcgcggcccc gacccggtcc gccacctcct tctgcaccag gaacacgatg
       61 cgccggggcc gcggcggctc cagcgccttg tcgatgagcg gtgaggtgat gttgtagggg
      121 atgttgcccg cgacgagaaa gtccggcccc gcgagcgcgt gccagtcggc ctcgagcgcg
      181 tcggcctcga cgacggtggc gccgggaact cgggcgcgga gcgcgggcac caggtcgccg
      241 tccttctcga tcgccaccag ctttcccacc cggcccgcga gcgcctcggt gagcgtcccc
      301 ggtcccgggc cgatctccag caccgtgtcg tccgccgtcg cgtcgagcgc gtcggcgagt
      361 cgctggagga tccgtgggtc ggtgaggaaa tgctggccga gcctgcgctt ggcccgcggc
      421 acgtcagatc cggagtacca gcagcgtgcg gtcgtccacc ggctcgccac cgaacgcctc
      481 cgccgcggcg agcaccgcct gcacgatcgc ctccgccggc tcgctccggc gggcgcagac
      541 ctccgccagg agccgctggt ccccgaacgg ctcgcccgcc tcgttccgcg cgtccaccat
      601 cccgtcggtc cagagcacca gcaggtcgtg gccgacgctc caggggagct gccggcgctg
      661 gatgctgccc gcggtcgcga gacccagcgg cggcgcggtc gtctccagcc gctcgggctc
      721 gccgaacctc ggcacccgga aggcgtaggg atgtcccgcg ctggcgtagt ccaggcgtcc
      781 gcccagcggg tcgagcacgc cgtagaagac gctgaagtac atctcggtct ccgccagctc
      841 ggtcgagagg ctgtcgagca gcgcgctgag cgtctcgtcg ggcgtcaccg aggcggcggc
      901 gtggatgccg gcggcggaga gcaccagggc catcaccagg gccgcggaga atccgtggga
      961 cgcgacgtcg cccagcatca cccccacccg gccgcgtccc agccgggcga aggtgtagaa
     1021 gtcgcccccc acggattccg cgggcagaca gcgcgccgcg acctcggcat cgccgtgcag
     1081 gaccgcgggc gacggcagca gcttcagctg gaggtcgtgc gccagctgca gctcgcggcg
     1141 cagctgctgc tgccggagat cgcgctcgac cagccgcgcg ttctccaccg ccgcgccgat
     1201 ctggttcgcg acggcggcca ccagcttgcg gtctcccggc gtgaaccggt cgccgccgat
     1261 gcggtcggtg aggttgatga cgccgatgca gcggagcggc gagttgggcg cgccatagca
     1321 gatggggacg ctgaggtagg cccgccccag gtatccccgg tcgccgccgc agtcgcccgg
     1381 cgcaccgtcg gcctccgcgg ggtcgtagac gatggtgcgc tgctcccggt agacccgggc
     1441 ggccaccgag cactcgtcgt ccaccggcac cggcgcgagg ccctcgaccc cgaatccccg
     1501 cgccgccacg gtgcggagca cccgcgccgc ctcgtccacc accatgatcg aggcccgctt
     1561 ggccccgacc accgtgctga cctcgcggac gatcgtgcgg gtcgcctctt ccagccgcac
     1621 ggtggtgccg agaatctcgc tgatcgcgta gaggaggtcg atctcctgat agcggctggc
     1681 cagctcttcc gccatgaagc cgcgctgccg ctccgtgtcc agcaccgccg cgacgatcgg
     1741 cagcacccgg tcggcggccg agcgggaccg gtcctcggtg ccggcgtcca cctcgaccca
     1801 gaagccttcc agcgtgttca ccggggcgag ccatgcgctg ccgtccgggg tcggcaccag
     1861 cccggcctcg cgcggcatgg tcgggctcca tccggggtcg ggggcgccgc cggccggctt
     1921 cagcgcgcgc ccgtcgaagc gccacaggcg cacccgtccc tgcacgagcg cgcccagccc
     1981 ttcgagcagg ggtcccagcc gtcctagtga cgacgcagga tcatgcagat ggagtttcct
     2041 tgctcgttga attgcaccgc gtccacgagc ttgcggatga ggaagagtcc gcggcctccg
     2101 gcctcgtcga gctgctccgg ctcgatcggc tcgggcacgc tgccgggatc gaacccgggc
     2161 ccctcgtcgg tgacgtggac ccggatgatg tcctcgcgca gctcggcgcg aacatccacc
     2221 cacttgtcca gcgactcgcg gttgccgcgg aggatggcgt tggcgagcgc ctcggagagc
     2281 acgacctgga gccggaaccg gatggtccgg gtggcgacgt ggccggcgag gcagtggcgg
     2341 gtgaccagct ccaccgcctc ctcgatgcac cccacgtcgc tgggcagccg gaccgagacc
     2401 agcgtggcgg cgccctcggc gtcctgggcc ggcgagcggc ggacacagag gcggaggggc
     2461 gacgtcatga gtcgctcgct agaagctggc cagggcctgc tggggcgtgt cggcgatgga
     2521 gaagagggtg tccagcttgg tgagctcgaa cagcgagcgg aggtcctcgt tgagcccgga
     2581 cagccggagc tcgccgccgg cctcgcggat ccgcttggag atggacacca gcgcgcccag
     2641 tcccgacgaa tcgatg
//
LOCUS       DASUYN010000260         2166 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1406475, whole genome shotgun sequence.
ACCESSION   DASUYN010000260 DASUYN010000000
VERSION     DASUYN010000260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2166)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2166)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2166
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1406475"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            130..1359
                     /locus_tag="VF061_05150"
     CDS             130..1359
                     /locus_tag="VF061_05150"
                     /inference="COORDINATES: protein motif:HMM:NF014344.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine deiminase family protein"
                     /protein_id="HEX6668920.1"
                     /translation="MSVEVTSEIGPLQSVLVHTPGPELEAVTPRNRADFLYDDIIDLE
                     IAQREHRQFVSVLRRFAKVHQVRDLLAEVLAEPEAREFLISKTMDVVPSDDLALRMGT
                     MPAAQIVEMLIQGTREPSGPITTALNEEGFAFPPLPNLYFPRDIGMVIGTHAVVGSMR
                     YGVRWTEELLIKSLFVFHPELSNAGLLYDGSEEKRSNYTLEGGDVHYLRPDLLVVGFS
                     ERTSPAALDRLCDVAFERGLATDVLVVVLPTAPTAIHLDMIFSHVDHELCVVYPPYFI
                     GPERLAVLHRRKGQEGVREMPSFFAAAKELGLPLEPIFAGGTNRTRQEREQWSSACNF
                     LAVRPGTIISYRRNDATLCELEAAGFRLVPAVNFLAFDDWREAKHRTAITVEGSELAR
                     GGGGPRCMSLPVRRAAL"
     gene            1356..>2166
                     /locus_tag="VF061_05155"
     CDS             1356..>2166
                     /locus_tag="VF061_05155"
                     /inference="COORDINATES: protein motif:HMM:TIGR00573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HEX6668921.1"
                     /translation="MIGLSAHPSTTLVERVHGVLRTGPQSSAMLCREVLGLSEAPVVI
                     CDRIAVALLGSDPRIRRISDGRWGLVPAVQGSPLLEECTFAVVDVETTGMRALGHDRI
                     TEIAVVALCGGRREVVFETLVNPGRPIPPAIRAITNISDDMVRSAPTFAEVCDRVVEV
                     LAGRVFVAHNARFDWNFVNAEVRRARDLALDGPRLCTVRLARRLVKGIASCGLDSLTH
                     WFGFCNGSRHRATGDALVTAELLERLLTLAREEGARTLQDLAAIESRRAPRR"
BASE COUNT          293 a          772 c          777 g          324 t
ORIGIN      
        1 ggccgggcaa ggtgctccgg gggccggcgg caggcggtga ggcggtaagg cggtaaggcg
       61 gtaaggcggt aggtcggcgc gtcccgaccg tcctaccgtc ctaccgcctt accgccttac
      121 cttccgccca tgtccgtcga agtcacctcc gagatcggcc ctctccagtc cgtcctcgtg
      181 cacacccccg gccccgagct ggaggcggtc acgccgagga accgggcgga cttcctctac
      241 gacgatatca tcgatctcga gatcgcccag cgcgagcacc gccagttcgt ctccgtgctc
      301 cggcgcttcg ccaaggtgca ccaggtccgc gacctcctcg ccgaggtcct ggcggagccg
      361 gaggcgcggg agttcctgat cagcaagacc atggacgtcg ttccctcgga cgacctcgcg
      421 ctccggatgg gcaccatgcc cgcggcgcag atcgtggaga tgctgatcca gggcacccgg
      481 gagccgagcg ggccgatcac caccgcgctc aacgaggagg gattcgcctt tccgccgctg
      541 cccaacctct acttcccccg ggacatcggc atggtcatcg gcacccacgc ggtggtgggc
      601 tcgatgcgct acggggtgcg ctggaccgag gagctgctga tcaagtcgct cttcgtcttc
      661 caccccgagc tgtccaacgc cggcctgctc tacgacggat ccgaggagaa gcgcagcaac
      721 tacaccctgg aaggcggcga cgtccattac ctccggcccg acctcctggt ggtcgggttc
      781 agcgagcgga cctcgcccgc ggcgctcgac cgcctgtgtg acgtggcctt cgagcgggga
      841 ctcgcgaccg atgtcctggt cgtggtgctg cccaccgcgc cgaccgcgat ccacctcgac
      901 atgatcttca gccatgtgga ccacgagctc tgcgtggtct acccgccgta cttcatcggc
      961 cccgagcgcc tcgccgtgct gcaccggcgc aaggggcagg agggcgtgcg ggagatgccg
     1021 agcttcttcg cggcggccaa ggagctgggg ctgccgctgg agccgatctt cgccggggga
     1081 accaaccgca cccgccagga gcgggagcag tggagctcgg cctgcaactt tctcgcggtc
     1141 cggccgggga cgatcatcag ctaccgccgc aacgacgcga ccctgtgcga gctggaggcg
     1201 gccgggttcc ggctggtgcc ggcggtcaac ttcctcgcct tcgacgactg gcgcgaggcc
     1261 aagcaccgca ccgcgatcac ggtcgaaggc tccgagctgg cgcggggcgg cggcgggccg
     1321 cgctgcatgt cgctgccggt gcggcgggcg gccctgtgat cggcctctcg gcccatccca
     1381 gcaccacgct ggtggagcgg gtccacggcg tgctgcgcac cgggccgcag tcctccgcca
     1441 tgctctgccg cgaggtcctc ggcctgagcg aggcaccggt cgtgatctgc gaccggatcg
     1501 cggtcgcgct gctcggctcg gatccccgga tccggcggat ctccgacggc cgctggggac
     1561 tggtgccggc ggtgcagggc tcgccgctgc tggaggagtg caccttcgcc gtggtggacg
     1621 tggagacgac cggcatgcgg gcgctgggcc acgaccggat caccgagatc gccgtcgtcg
     1681 cgctctgcgg cgggcggcgc gaggtcgtgt tcgagacgct ggtgaacccc gggcggccga
     1741 ttccaccggc gatccgcgcg atcaccaaca tcagcgacga catggtccgg tccgcgccga
     1801 ccttcgccga ggtctgcgac cgggtggtcg aagtgctcgc gggccgcgtc ttcgtggccc
     1861 acaacgcgcg gttcgactgg aacttcgtga acgcggaggt gcggcgggcc cgcgacctcg
     1921 cgctggacgg gccccggctg tgcacggtgc ggctggcgcg gcggctggtg aaggggatcg
     1981 cctcctgcgg gctcgacagc ctgacgcact ggttcgggtt ctgcaacggc tcccgccacc
     2041 gcgccacggg cgacgcgctg gtgacggcgg agctgctcga gcgactcctg acgctggccc
     2101 gcgaggaggg ggcgcggacg ctccaggacc tggcggcgat cgagagccgc cgcgcgcccc
     2161 ggcggc
//
LOCUS       DASUYN010000261         2737 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_83760, whole genome shotgun sequence.
ACCESSION   DASUYN010000261 DASUYN010000000
VERSION     DASUYN010000261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2737)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2737)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2737
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_83760"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..327
                     /locus_tag="VF061_05160"
     CDS             <1..327
                     /locus_tag="VF061_05160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668922.1"
                     /translation="AVAAHPERILAVYIRSVEPHPERAAAIARLAEEVRAAGSTLVLA
                     DDTLTIASHAAAHGWIRRETLAEIGGEKRADEGEGGKADAPGVPAHPDAPTVVVDRDL
                     GAGDLQ"
     gene            329..1777
                     /locus_tag="VF061_05165"
     CDS             329..1777
                     /locus_tag="VF061_05165"
                     /inference="COORDINATES: protein motif:HMM:NF013132.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008509 - monoatomic anion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006820 - monoatomic anion transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HEX6668923.1"
                     /translation="MRRTVGSFLAPAVFLALLALPFPGLSSEAHRLAAVMGAVVVLWV
                     TEALPLPVTALLGASACVALDVAPAREVFAPFADPLMFLFIGAFILARGIFLHGLDRR
                     VAYAVLSLPWVGARPARILVAFGAATALLSAWISNTATTAMMFGIGLSILAALRSQAA
                     SGTIDPRYATALMLMTSFAASIGGLATPVGTPPNLIGIGFIRSQLGVEIAFFQWMLIG
                     IPVVALLFGFLAVYLNLVGPSGLRELPAGAELIRHERAQLGPWTTGQRSVAIAFGLTV
                     ALWVVPGVTALVAGEESPVYLALSRRVPEGVAALVGASLLFVLPGKDGPAITWREATQ
                     IDWGVVLLYGGGFALGVLSFQTGLAEGMGRGLTSLLPVHGSFGLLVASVVLATILSET
                     TSNTASANMVVPVVIAIARAAGLDPLEAALGATLGSSLGFMLPVSTPCNAIVYGSGYI
                     PLGRMIRWGFLLDVVGVVVIIGLVRALSPLLR"
     gene            1841..>2737
                     /locus_tag="VF061_05170"
     CDS             1841..>2737
                     /locus_tag="VF061_05170"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEX6668924.1"
                     /translation="MSIDPLLTLASFGIGIVVGLTGMGGGALMTPVLVLFFHIPPLTA
                     VSSDLVASAIMKPVGSVVHLRRGTVHLGLVKWLCIGSIPGAFSGVLIARALGHGEEVQ
                     QVVRTALGVALLLAAIGLIVRAYLRLLEHARRRDGRAPPLPQGKPTVDLKVWPTIVVG
                     MIGGVVVGLTSVGSGSLIIIALMTLYPTLKASELVGTDLVQAVPLVSAAALGHLIFGD
                     FQLDLTTSLLVGCIPGVYIGAHLSAVAPGGLVRRALAFVLLASALKLFEVPNTETAII
                     LGVVILFAPVLWMVVRRRLGYPA"
BASE COUNT          282 a          975 c          993 g          487 t
ORIGIN      
        1 gccgtggcgg cccaccccga gcggatcctc gccgtctaca tccggagcgt ggagcctcac
       61 cccgagcgag ccgcggcgat cgcacgcctg gccgaggagg tgagagcggc gggctccacg
      121 ctggtgctgg ctgacgacac cctcacgatc gcgtcgcacg ccgccgcgca cggctggatc
      181 cggcgggaga cgctggcgga gatcggtggc gagaagcggg cggacgaggg ggagggcggc
      241 aaggccgacg cgcccggcgt gcccgcccat cccgacgcgc cgacggtcgt ggtggaccgg
      301 gacctcgggg ccggggacct gcagtagcgt gcggcggacc gtcgggtcgt tcctcgcacc
      361 ggcggtcttc ctcgcgctgc tggcgctgcc cttcccgggc ctctcgtccg aagcgcaccg
      421 gctggccgcc gtcatgggcg ccgtggtggt gctgtgggtg accgaggccc tgccgctccc
      481 ggtgaccgcg ctgctcggcg cctcggcctg cgtggccctg gacgtggcgc ccgcacggga
      541 ggtgttcgcg cccttcgccg acccgctgat gttcctgttc atcggcgcct tcatcctggc
      601 ccggggcatc ttcctccacg ggctcgaccg ccgggtggca tacgcggtgc tctcgctgcc
      661 ctgggtcggt gcccgccccg cgcggatcct ggtcgcgttc ggcgccgcga ccgcgctcct
      721 ctccgcctgg atctccaata ccgccaccac ggccatgatg ttcggcatcg ggctctcgat
      781 cctcgccgcc ctgcgctccc aggccgcgag cggcaccatc gatccgcgct acgccacggc
      841 cctcatgctg atgacctcgt tcgcggcctc catcggcggg ctcgcgacgc cggtgggcac
      901 gccgccgaac ctgatcggca tcggcttcat ccgctcccag ctgggggtcg agatcgcgtt
      961 cttccagtgg atgctgatcg ggattccggt ggtggccctg ctcttcgggt tcctggcggt
     1021 ctacctgaac ctcgtgggtc cgtcgggcct gcgcgagctg cccgctgggg ccgagctcat
     1081 ccggcacgag cgcgcgcagc tcggcccctg gaccaccgga cagcggtcgg tcgcgatcgc
     1141 cttcggcctg accgtggcgc tctgggtggt gccgggggta acggcgttgg tggcgggcga
     1201 ggaaagcccg gtctatctcg ctctctcgcg gcgggtcccc gaaggcgtcg cggcgctggt
     1261 gggcgcgtcc ctgctgttcg tgctgccggg caaggatggg ccggcgatca cctggcggga
     1321 ggccacccag atcgactggg gcgtggtgct gctctacggc ggcgggttcg cgctgggcgt
     1381 gctgtccttc cagaccgggc tggccgaggg gatggggcgg gggctcacct cgctcctgcc
     1441 ggtccacggc agcttcgggc tgctcgtggc atcggttgtg ctggcgacga tcctctcgga
     1501 gacgacttcc aacaccgcgt cggccaacat ggtcgtcccg gtggtgatcg ccatcgcgcg
     1561 tgccgccggc ctcgacccgc tggaggcggc cctgggggcg acgctcggct ccagcctcgg
     1621 gttcatgctg ccggtctcga cgccgtgcaa tgcgatcgtc tacggctcgg gatacatccc
     1681 gctgggccgg atgatccgct ggggattcct gttggacgtg gtcggcgtgg tggtcatcat
     1741 cgggctggtc cgggcgcttt cgcccctgct gcgctgatcg cgcggcgagg ttgacaatgg
     1801 cacggcctcg gccctctttc ctgcttcttt cggagcgcgc ttgagcatcg atccgctact
     1861 caccctcgcc tcattcggta tcggcatcgt cgtcggcctc accggcatgg gcggcggggc
     1921 gctgatgacc cccgtgctgg tgctgttctt ccacatcccg ccgctgaccg ccgtctcctc
     1981 ggatctggtg gccagcgcga tcatgaagcc ggtcggctcg gtcgtccacc tgcgccgggg
     2041 cacggtgcac ctggggctgg tgaaatggct gtgcatcggg tccatccccg gcgcgttcag
     2101 cggggtgctc atcgcccgcg cgctgggcca cggcgaggag gtgcagcagg tggtccgcac
     2161 ggccctcggc gtcgcgctgc tgctcgcggc gatcggcctg atcgtgcggg cctacctgcg
     2221 gctgctggaa cacgcgcggc ggcgcgacgg gcgggcgccg cccctgccgc agggcaagcc
     2281 caccgtggat ctgaaggtgt ggcccaccat cgtggtgggg atgatcggcg gcgtggtggt
     2341 ggggctgacg tcggtgggct cgggctcgct catcatcatc gccctcatga ccctctatcc
     2401 gacgctcaag gccagcgagc tggtgggcac cgacctggta caggcggtgc ccctggtctc
     2461 cgcggcggcg ctggggcacc tgatcttcgg cgacttccag ctcgacctca cgacctcgct
     2521 gctcgtcggc tgcattccgg gcgtgtacat cggtgcgcac ctctccgccg tggcgccggg
     2581 tggcctggtg cggcgggccc tcgccttcgt gctgctcgcc tccgccctca agctgttcga
     2641 ggtgcccaac accgagaccg ccatcatcct cggcgtggtg atactcttcg cgccggtcct
     2701 gtggatggtg gtgcggcggc ggctgggcta ccccgcg
//
LOCUS       DASUYN010000262         4922 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1188063, whole genome shotgun sequence.
ACCESSION   DASUYN010000262 DASUYN010000000
VERSION     DASUYN010000262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4922)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4922)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4922
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1188063"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1440
                     /locus_tag="VF061_05175"
     CDS             <1..1440
                     /locus_tag="VF061_05175"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX6668925.1"
                     /translation="RNPVGLDWTGGTLWTVVNERDGLGDDLVPDYLTSVRDGAFYGWP
                     YSYFGQHEDPRQQGRRPDLVAKAVAPDYALGSHTASLGLAFYRGERFPEPWRNGAYIG
                     QHGSWNRSSPAGYRVLFVPFEGGRPSGAPREFLGGFIADSGRNEAYGRPLGVAVHPDG
                     ALLVADDAAGIVWRVSYTGGSGQGGRASGSRDRAVRLATVGGGLAIPESARWDAEQRV
                     WFVSNINVGPLKDGNGFISRITADGRVDSLRFIASGRDGVTLHAPRGMALVGDTLWVA
                     DIDAVRGFDRRSGAPLATVDLGPLGALLLNDIAPTPDGSLYVTDTGVRFDSEGNRQHT
                     GPDRVFRIRGGQPSVALEGDWLGQPNGVTWDPIGKRLLFAPVAGDGTVQQWTEGAARP
                     EPIARGPGRYDGIEVLPGGRILVAGWNDSTVSEIVGRELRPLIRGVPAPADIGVDPEG
                     GVVAIPILREDRVELWRLSGAASSPPPAP"
     gene            complement(1403..2164)
                     /locus_tag="VF061_05180"
     CDS             complement(1403..2164)
                     /locus_tag="VF061_05180"
                     /inference="COORDINATES: protein motif:HMM:NF016131.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory protein FdhE"
                     /protein_id="HEX6668926.1"
                     /translation="MLRRLAGVWSGMAVALPEGAPSLEAATEKVRNGIPGLAEEPLLD
                     GDGLRTAVAAIAEALAGVEGFEGAASLGRRLLASAPDWDRLVPLALGGTWDALEGLER
                     ELAAEPEAIPALLDYAVRPTLRAAARGMQPVLADISWGRGACPACGAPPLLSVTTGKE
                     ASRYLLCGRCGTSWSWSRTRCAACGEDDHRRLGYLHAPGEGDYRRAEVCDTCRSYLKT
                     LSVLDLPDPDRLLRLDLESAGLDFMALEAGYSRRR"
     gene            complement(2227..2595)
                     /locus_tag="VF061_05185"
     CDS             complement(2227..2595)
                     /locus_tag="VF061_05185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668927.1"
                     /translation="MGALTPGAALAAILLAGCSPEATRTRDGGVGADPGNKILVEPAG
                     RIEPRAADTTLWPGRAPAPVERLARGQVPPATYPTGGTTPAQQAESPIRPDTPPTEPQ
                     QRTFDGDPSADPREPSGGER"
     gene            complement(2583..3569)
                     /gene="nrfD"
                     /locus_tag="VF061_05190"
     CDS             complement(2583..3569)
                     /gene="nrfD"
                     /locus_tag="VF061_05190"
                     /inference="COORDINATES: protein motif:HMM:NF025940.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HEX6668928.1"
                     /translation="MPRVTLEILAQVGTVPVGHGFAPHWGWYIVLYFFFGGLCAGAYF
                     IATMLSLVGDPRDRETIRLGYLIAFPLLLVCTVLLILDLGVPLRFWHMVFQSQNVPEL
                     MFKPWSPISIGTWILSAFGLFSSVAFLAALLDSGRLRWQPAVRAAERVRRLPHPVLTA
                     WNVIGCLFGFALAGYTGVLVTATTIPVWQNAQLLGGLFLVSGASAAYALLVLILLRHG
                     RAHGDPAVAKLLRADRFTMALEVLLIVGLVVTLGAASRPITTGGFGVLFWLGAVGLGV
                     VVPLLVHHVSPSGWDAHRREVIAAICVLIGGLILRFVVVMSPQYPAVSLWAL"
     gene            complement(3557..4522)
                     /locus_tag="VF061_05195"
     CDS             complement(3557..4522)
                     /locus_tag="VF061_05195"
                     /inference="COORDINATES: protein motif:HMM:NF024644.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEX6668929.1"
                     /translation="MAKGFYTDTTVCIGCKACQTACHQWNQLPAVNGGQVELSGNSYD
                     NTGRLNALDWRHVRFIEQFPEDRHQDGFLQGSRWLMMSDVCKHCVRAGCLEVCPTGAI
                     IRTEFDSVYIQQDVCNGCRACIAACPFGVVDVGEDGKAHKCTLCYDRLQHGMEPACAQ
                     ACPTDSIRFGEVGELMALADQRVADLRERGVPAYVYGKEEIVGGLNCFFLLVDKPEVY
                     GLPADPRLPSAGVPEGFALSALTGAVLAAGSVVAFRKDRMDGMSGGDPEPDSPPPAPP
                     AGAGLPPGTDLVAFMSAVHGANDAARARRAEPGTGACGETCGCHA"
     gene            complement(4722..4922)
                     /locus_tag="VF061_05200"
                     /pseudo
     CDS             complement(4722..4922)
                     /locus_tag="VF061_05200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012874565.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          708 a         1747 c         1832 g          635 t
ORIGIN      
        1 cgcaacccgg tcggcctcga ctggacgggc ggcacgctct ggaccgtcgt gaacgagcgc
       61 gacggcctgg gcgacgacct ggtccccgac tacctcacca gcgtgcggga cggcgcgttc
      121 tacggctggc cctactcgta cttcgggcaa cacgaggatc cgcgacagca gggccggcgt
      181 cccgatctgg tcgcgaaggc ggtcgccccc gactacgcgc tgggctcgca taccgcctcg
      241 ctgggcctgg ccttctaccg gggggagcgg ttccccgagc cctggcggaa cggcgcgtac
      301 atcggccagc acggctcctg gaaccggtcg agtcccgcgg ggtaccgggt gctgttcgtc
      361 cccttcgagg gtggccggcc gagcggtgca ccgcgcgagt ttctcggcgg cttcatcgcc
      421 gactccggca ggaacgaggc gtacggccgc ccgctcggcg ttgcggtgca tccggacggc
      481 gcgctgctgg tggcggacga cgcggcgggc atcgtctggc gggtgagcta caccggaggc
      541 tcggggcagg gtggccgggc gtcggggtcg cgcgaccggg ccgtgcggct ggcgacggtc
      601 ggcgggggac tcgccattcc cgagagcgcc cgctgggatg cggagcagcg ggtctggttc
      661 gtcagcaaca tcaacgtcgg cccgctgaag gacgggaacg gcttcatcag ccggatcacg
      721 gccgatgggc gggtggactc cctgcggttc atcgcgagtg ggagggatgg ggtcaccctg
      781 cacgcgccgc gcgggatggc gctggtgggt gacaccctct gggtggccga catcgatgcg
      841 gtgcgcggtt tcgaccggcg cagcggcgcg ccgctcgcca cggtggacct cggccccctc
      901 ggtgcgctcc tgctcaacga catcgccccg acgcccgacg gctcgctcta cgtcaccgac
      961 accggggtgc ggttcgattc cgaggggaac cggcagcaca ccgggcccga tcgggtgttc
     1021 cgcatccgcg gcgggcagcc ctcggtggcg ctggaaggcg actggctggg tcagcccaac
     1081 ggggtgacct gggacccgat aggcaagcgg ctgctgttcg cgccggtggc gggcgacggc
     1141 acggtccagc agtggaccga gggggccgcc cgacccgagc ccatcgcccg gggtccgggg
     1201 cggtacgacg gcatcgaggt gctgcccggg ggccgaatcc tggtggccgg gtggaacgat
     1261 tcgacggtga gcgagatcgt gggtcgggag ctgcgcccgc tgatccgtgg cgtgccggcg
     1321 cccgccgaca tcggcgtgga tccggaaggc ggcgtggtcg cgatccccat cctccgggaa
     1381 gatcgggtcg agctgtggcg actcagcggc gccgcgagta gcccgcctcc agcgccatga
     1441 agtcgagccc ggcgctctcc aggtccagcc ggagcagccg gtccgggtcg ggcaggtcga
     1501 ggacggagag cgtcttcagg taactcctgc aggtgtcgca cacctcggcc cggcggtagt
     1561 cgccctcgcc gggcgcgtgc aggtagccga gccggcggtg gtcgtcctcg ccgcaggcgg
     1621 cgcagcgggt gcgggaccag ctccaggagg tgccgcaccg cccgcagagg aggtagcggg
     1681 acgcctcctt gcccgtcgtg acggagagga gcggcggagc gccgcaggcg ggacaggcgc
     1741 cccggcccca ggagatgtcg gcgaggaccg gttgcatgcc gcgcgcggcc gcgcgcaacg
     1801 tggggcgcac cgcgtagtcg agcagggccg gaatcgcctc cggctccgcc gcgagctcgc
     1861 gctccagtcc ctcgagcgcg tcccaggtgc cgccgagtgc cagggggacc aggcggtccc
     1921 agtcgggcgc gctggccagg agccgccggc cgagcgacgc cgccccttcg aagccctcca
     1981 ctccggcgag cgcctccgcg atcgccgcca ccgccgtgcg gaggccgtcg ccgtcgagga
     2041 gcggctcctc ggccaggccc ggtatcccgt tccgcacctt ctcggtcgcg gcctcgagcg
     2101 agggggctcc ctccggcagg gcgacggcca tcccgctcca cactccggcg agccgccgca
     2161 gcacctcgag tccgcgggcg agctcggggt cggccccgac ggtgcccggc ggcccggacg
     2221 cggcgctcag cgttcgcctc cgctcggctc gcgcggatcc gcggaaggat cgccgtcgaa
     2281 ggtgcgctgc tgtggctcgg tgggtggggt gtcgggccgg atcggcgact ccgcctgctg
     2341 ggccggggtg gtgccgcccg taggataggt ggccggcggc acctgcccac gggcgagccg
     2401 ctccaccggg gccggcgccc gcccgggcca gagcgtcgtg tccgccgcgc ggggctcgat
     2461 ccggccggcc ggctcgacga ggatcttgtt gccgggatcg gctccaaccc cgccgtcccg
     2521 cgtccgggtg gcttcgggcg agcacccggc gagcagaatg gcggcgagcg cggccccggg
     2581 ggtcagagcg cccacagcga gaccgccgga tactgcgggg acatcaccac cacgaagcgg
     2641 aggatgagtc cgccgatcag cacgcagatg gccgcgatga cttcccgccg atgcgcgtcc
     2701 cagccggacg gcgacacgtg gtggaccagg agcggcacca ctacccccag gcccacggcg
     2761 ccgagccaga agaggacccc gaacccgccg gtcgtgatcg gccgggaggc ggcgccgagg
     2821 gtgaccacca acccgacgat cagcaggacc tccagtgcca tggtgaaccg gtccgcccgg
     2881 aggagcttgg cgaccgccgg atcgccgtgg gcccgaccgt ggcgcagcag gatgagcacc
     2941 agcagcgcgt aggctgccga ggcgccggag accaggaaca gcccgccgag cagctgggca
     3001 ttctgccaga ccgggatcgt ggtcgcggtc accagcacgc cggtatagcc cgccagggcg
     3061 aagccgaaca ggcagccgat cacattccac gcggtgagca ccgggtgcgg caggcgccgg
     3121 acccgctcgg ccgcccgcac cgccggctgc caccgcagcc ggccggaatc gagcagcgcc
     3181 gcgaggaagg cgacggagga gaacaagccg aaggccgaca ggatccaggt gccgatcgag
     3241 atgggcgacc acggcttgaa catcagctcg ggcacgttct ggctctggaa gaccatgtgc
     3301 cagaagcgga gcgggacgcc caggtcgagg atcagcagga cggtgcagac caggagcagc
     3361 ggaaacgcga tcaggtaacc gaggcggatc gtctcccggt cgcggggatc gcccacgagc
     3421 gacagcatgg tggcgatgaa gtaggcgccg gcgcagagcc cgccgaagaa gaagtacagg
     3481 acgatgtacc agccccaatg cggcgcgaag ccgtggccca cggggacggt gccgacctgg
     3541 gccaggatct ccagggtcac gcgtggcacc cgcaggtctc gccgcaggcg ccggtgcccg
     3601 gctccgcccg acgggctcgg gccgcgtcgt tggcgccgtg cacggcgctc atgaaggcga
     3661 ccaggtcggt gcccggcggc aggccggcgc cggcgggtgg tgccggcggc ggcgagtccg
     3721 gctcgggatc gccgcccgac atcccgtcca tccggtcctt ccgaaacgcc accacgctcc
     3781 cggcggcgag cacggcaccc gtcagcgcgc tcagcgcgaa gccctccggc acgccggcgg
     3841 aaggcagtcg gggatcggcc ggcaggccgt acacttccgg cttgtccacc aggagaaaga
     3901 agcaattgag cccgccgacg atctcctcct tgccgtacac gtaggccggc acgccgcgct
     3961 cccgcaggtc ggcgacccgc tggtcggcca gggccatcag ctcgccgact tcgccgaacc
     4021 ggatcgagtc cgtggggcag gcctgggcgc aggccggctc catcccgtgc tgcagccggt
     4081 cgtagcacag ggtgcacttg tgggccttcc cgtcctcgcc cacgtccacc acgccgaagg
     4141 gacaggcggc gatgcaggcc cgacagccgt tgcacacgtc ctgctggatg tagacgctgt
     4201 cgaactcggt gcggatgatg gcgccggtgg ggcagacctc gagacacccc gcgcgcacgc
     4261 agtgcttgca gacgtccgac atcatcagcc agcgggagcc ctggaggaac ccgtcctggt
     4321 ggcggtcctc ggggaactgc tcgatgaacc gcacgtgacg ccagtccagc gcgttgagcc
     4381 ggccggtgtt gtcgtaggag ttgccgctca gctccacctg tccgccgttg acggcgggca
     4441 gctggttcca ctgatgacac gccgtctgac acgccttgca gccgatgcag accgtggtgt
     4501 cggtgtagaa gcccttagcc atggtacacc ccgatcggct gatccagcgg gaacggcggc
     4561 ggaccgacca cgatgtcctc cggccgctcc gcggtcgcgg cgatctcgat cgcccgctcg
     4621 atgttcgcct ccgcggcctg ccgctcccgc cggccgacgt gggggacggg caccgccgct
     4681 ccttcgagct tcgccttgat ctccttggcc ctgcgacccg gctccacctg gcacatgaac
     4741 accttgcctt cgtggatggt gacgttgggg tccgccacca tggagatgat ctcgttggtg
     4801 acgtcgcctg tcaccacgcc gcggtagccc cagtggaagg gcatcccgac ctggtgcacc
     4861 gtgcggccca tgatctggaa gggccgcatc cgccgggtca ccagcgcctt gcactccacg
     4921 gc
//
LOCUS       DASUYN010000263         2062 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1407472, whole genome shotgun sequence.
ACCESSION   DASUYN010000263 DASUYN010000000
VERSION     DASUYN010000263.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2062
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1407472"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(110..319)
                     /gene="thiS"
                     /locus_tag="VF061_05205"
     CDS             complement(110..319)
                     /gene="thiS"
                     /locus_tag="VF061_05205"
                     /inference="COORDINATES: protein motif:HMM:TIGR01683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HEX6668930.1"
                     /translation="MSELSIVVNGEERRVPGPATLLDLLAHLGLDPRTVVVERNREIV
                     RRPRLAETELAEGDAIELVHFVGGG"
     gene            complement(316..939)
                     /locus_tag="VF061_05210"
     CDS             complement(316..939)
                     /locus_tag="VF061_05210"
                     /inference="COORDINATES: protein motif:HMM:NF014622.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HEX6668931.1"
                     /translation="MRPLPRLHAVTDAAVIAADDFPVRAAAIAAAGPAVALHARDRSA
                     GGAALAQVAQRLVALARPPEASVVVNGRPDVAQAVGAQGVQLGGGDLRPQEARACFPR
                     GWIGCSVHSRAEAEAAAREGADYLLVGNVYQTASHPGRPALGLALVRETVGLGLPVIA
                     IGGIDAGRAAAVRDEGAYGVAAIAALWWAPDPATAALALLAPWSEGP"
     gene            complement(936..1859)
                     /gene="fmt"
                     /locus_tag="VF061_05215"
     CDS             complement(936..1859)
                     /gene="fmt"
                     /locus_tag="VF061_05215"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR00460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004479 - methionyl-tRNA formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HEX6668932.1"
                     /translation="MRIVFFGTPEFAVASLRALLRDRFTVAGVVTQPDKPQGRSRSTL
                     VPPPVKTAALEAGLPVLQPARPVGDLFLAGLRRLEPDLGVVVAYGHILRREVLDLPPR
                     GMINVHASLLPRFRGAAPIQHAILAGDRETGISIMRMEEGLDSGPVLHRTPTPIEDGE
                     TAGTLTARLADLGAAALVEALSLLSAGSVKPQPQDDSRATYAPKISREAARLDWSREP
                     VALERRIRAFDPVPGAWTTLDGAPVKLFGALPAVGSGEPGTVLAASDRLVVAGGGGAI
                     AVREVQPAGRNRLTVEDWVRGRGVAAGSRFE"
     gene            complement(1859..>2062)
                     /locus_tag="VF061_05220"
     CDS             complement(1859..>2062)
                     /locus_tag="VF061_05220"
                     /inference="COORDINATES: protein motif:HMM:NF013492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HEX6668933.1"
                     /translation="DGTRYRRDATGLKARAIQHEIDHLDGILFLDHLSLIRRQMLLAR
                     WRREHKDDTGYTKEVEPESASTD"
BASE COUNT          269 a          798 c          749 g          246 t
ORIGIN      
        1 gctccgcccc ccgatcgtca gggggctctc caccagctcg gccggcgcga gtgtcgaagt
       61 catgggggaa aagataaagg gtccggaccg atcggcgggc gatcggtcct cacccgcctc
      121 cgacgaagtg caccagctcg atcgcgtccc cctcggcgag ctcggtctcg gccaggcggg
      181 ggcggcgcac gatctcgcgg ttccgctcca ccacgaccgt ccggggatcg agtccaaggt
      241 gcgccagcag gtccagcagc gtcgccggac caggcacccg ccgctcctcc ccgttgacca
      301 cgatgctcag ctcactcatg ggccctcact ccatggcgcc agcagcgcca gcgccgccgt
      361 cgccggatcg ggtgcccacc agagcgcggc gatcgcggcc accccgtagg cgccctcgtc
      421 ccgcaccgcc gcggcccggc cggcgtcgat gccgccgatc gcgatcaccg ggaggccgag
      481 gccgaccgtc tcccgcacca gggcgaggcc caaggcgggg cgccccggat gggaggcggt
      541 ctggtagacg ttgcccacca gcaggtaatc ggccccctcc cgcgccgccg cctcggcctc
      601 cgccctcgaa tgcaccgagc acccgatcca gccgcggggg aagcaggcac gggcctcctg
      661 cggccgcagg tcgccgcccc ccagctggac cccctgcgcg cccacggcct gggccacgtc
      721 cgggcggccg ttcacgacca ccgacgcttc gggcggccgg gccagcgcca ccagtcgctg
      781 ggcgacctgg gcgagcgccg ccccgcccgc cgaccggtcc cgggcgtgga gggcgacggc
      841 cgggccggcg gccgcgatgg cggcggcgcg gaccgggaag tcgtccgccg cgatcacggc
      901 ggcgtccgtc acggcgtgca gccggggcag gggtctcact cgaaccggct cccggcggcg
      961 acccctcgcc cgcgcaccca gtcttccacc gtgaggcgat tgcggcccgc gggctgcacc
     1021 tcccgcacgg cgatcgcgcc gccgccgccc gcgaccacca gccggtccga cgcggcgagc
     1081 acggttcccg gctccccgct ccccaccgcc ggcagggcgc cgaacagctt caccggcgcg
     1141 ccgtccaggg tcgtccacgc ccccggcacc ggatcgaagg cccggatccg gcgctccagg
     1201 gcgaccggtt cccggctcca gtcgagccgc gccgcctccc gcgagatctt gggggcatag
     1261 gtggcgcggc tgtcgtcctg cggctgcggc ttcaccgatc cggccgacag cagcgagagc
     1321 gcctccacca gcgcggccgc gccgagatcg gccagccggg cggtcagggt gccggcggtc
     1381 tcgccgtcct cgatcggggt gggcgtgcgg tgcagcaccg gcccgctgtc gagcccttcc
     1441 tccatgcgca tgatgctgat cccggtctcg cggtcgccgg cgagaatggc gtgctggatc
     1501 ggcgccgcgc cccggaagcg gggcaggagc gaggcgtgga cgttgatcat gccccgcggc
     1561 ggcaggtcca ggacctcccg ccggaggatg tgcccgtacg cgaccaccac gccgagatcg
     1621 ggctcgagcc gcctgagccc ggcgaggaag aggtcgccca ccggccgggc cggctggagc
     1681 acggggaggc cggcctcgag tgccgcggtc ttgaccggcg gagggaccaa ggtggagcgg
     1741 gagcggccct gcggcttgtc gggctgggtg acgaccccgg cgacggtgaa gcgatcgcgg
     1801 agcagggcgc ggagcgacgc gacggcgaac tccggcgtcc cgaagaagac gatccgcatc
     1861 agtcggtcga cgccgactcc ggctcgacct ccttggtgta tccggtgtcg tccttgtgct
     1921 cccgccgcca ccgggccaga agcatctgcc gcctgatgag gctcaagtgg tcgaggaaca
     1981 ggatgccgtc gagatgatcg atctcgtgct ggatcgcccg cgccttgagt ccggtggcat
     2041 cgcggcggta gcgggtgccg tc
//
LOCUS       DASUYN010000264         2450 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_306411, whole genome shotgun sequence.
ACCESSION   DASUYN010000264 DASUYN010000000
VERSION     DASUYN010000264.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2450)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2450)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2450
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_306411"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1668)
                     /locus_tag="VF061_05225"
     CDS             complement(<1..1668)
                     /locus_tag="VF061_05225"
                     /inference="COORDINATES: protein motif:HMM:NF015644.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0182 family protein"
                     /protein_id="HEX6668934.1"
                     /translation="MLRRRLTPILLSAAFAALFLVPTFSALLTDWWWFGEIGYRIVFT
                     RELITRVLLFLAAGGLTFGVLYLNLRAAQRGLVPNPVVLQFAPGAQRVDVSAALRRLS
                     LPVSLGFGLLAGFAATPAWDLVLRVIHRTPFGIVDPVFSRDIGFYVFTLPGLAAALGF
                     LTTLAVIALLLLVPLYWMRGDIVLGPRRLVIEPSAGLHLALLLAATFLLTALRLWLVE
                     IPSLLYSTTGPLTGASYTDLYARLPALRVSAVAAVFAAVAIAIGGMQRRLAWYGFLAI
                     AGYWAVAVLGRGLLPLAVQKFVVAPTELTRETPYLRHHIAATRQAWGLDSVEVRELAG
                     EAGLTLADIRANGPTIENVRLWDREPLLQTFGQLQEIRTYYDFVSVDDDRYSIDGVYR
                     QVLLSPRELNPASLPTRTFINEHLTFTHGMGLTLSPVNQVTAEGLPVLFIKDLPPVSN
                     VSLRVTRPQIYYGEIASEYVFVGTRQREFDHPSGEANVYAAYTGTGGIRVGNLWRRLL
                     LSIRFGSSKVLLSQDITNDSRVLYHRNIVARARKALPFLRFDRDPYLV"
     gene            complement(1705..>2450)
                     /locus_tag="VF061_05230"
     CDS             complement(1705..>2450)
                     /locus_tag="VF061_05230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668935.1"
                     /translation="RKAPPAPSRTDIYDKMDRFLKLPSGELARLATAQRKAELKRELG
                     EEPAPLFGEVRELILRKCHPDRERHVRAIFEAQPFGELERLVTQRLLDVLTAVAKEEL
                     GNEYWLRMVADLSGRSFEEMRVIVLEFLDTDIFHLSREHCVAFLDPMIESWDVDLATF
                     ALDIALNPRVVSGHVKRFEFVERGAGEAGGEEPGLTEFLRDPALSGTVAEDEIAFLRR
                     LRFNGKRPTPLYYYRELQSLRDPLHFRTP"
BASE COUNT          426 a          821 c          863 g          340 t
ORIGIN      
        1 caccaggtac gggtcgcgat cgaaccggag gaacggcagc gccttcctcg cccgggccac
       61 gatgttccgg tggtagagca cccggctgtc gttggtgatg tcctgcgaga ggaggacctt
      121 ggaggacccg aaccggatgg agagcagcag ccgacgccag aggttgccga cccggatgcc
      181 gcccgtgccg gtgtacgcgg cgtagacgtt cgcctcgccg gagggatggt cgaactcgcg
      241 ctgccgggtg ccgacgaaga cgtattcgct ggcgatctcg ccgtagtaga tctgcggacg
      301 ggtgacacgc aacgacacgt tggagaccgg cggcaggtcc ttgatgaaca gcaccggcag
      361 gccttcggcg gtcacctggt tgacggggct cagggtcagt cccatcccgt gggtgaaggt
      421 caggtgctcg ttgatgaagg tgcgggtcgg cagcgaggcc gggttgagct cgcggggcga
      481 gagcaggacc tggcggtaga ccccgtcgat cgagtaccgg tcgtcgtcca ccgagacgaa
      541 atcgtagtag gtgcggatct cctggagctg cccgaacgtc tgcagcagcg gctcccggtc
      601 ccacagccgc acgttctcta tggtcggacc attggcccgg atgtcggcca gcgtgagccc
      661 cgcctccccg gccagctcgc ggacttccac gctgtcgagc ccccacgcct ggcgggtggc
      721 cgcgatgtga tgccggagat acggcgtctc gcgggtcagc tccgtcggcg ccaccacgaa
      781 cttctggacc gccagcggga ggagaccgcg ccccaggacg gcgacggccc agtagcccgc
      841 gatggccagg aagccgtacc atgccagccg ccgctgcatc cccccgatcg cgatcgcgac
      901 cgcggcaaac accgccgcca ccgccgagac gcgcagggcc ggcagccggg cgtacagatc
      961 ggtgtagctg gcaccggtca gcggacccgt ggtggaatag agcaggctgg gaatctccac
     1021 cagccacagc cggagggcgg tgaggaggaa cgtcgccgcc agcaggaggg ccaggtgcag
     1081 ccccgcgctc ggctcgatca cgagccgacg cgggcccagc acgatatccc cgcgcatcca
     1141 gtagagcggg accagcagga ggagggcgat gacggcgagc gtcgtcagga atccgagcgc
     1201 ggccgcgagc ccgggcaggg tgaagacgta gaatccgatg tcgcgcgaga agaccgggtc
     1261 cacgattccg aacggcgtcc gatggatcac ccggagcacg aggtcccagg ccggggtcgc
     1321 cgcgaagccc gccagcaggc cgaagcccag tgacaccggc aggctgaggc gtcgcagcgc
     1381 cgccgagaca tccacccgct gcgccccggg cgcgaattgg agcacgaccg ggttgggcac
     1441 gaggccccgc tgcgccgccc gcaggttcag gtagagcacg ccgaaggtca gcccgcccgc
     1501 ggccaggaag agcagcaccc gggtgatcag ctcccgggtg aagacgatcc ggtagccgat
     1561 ctcgccgaac caccaccagt cggtgagcag cgcgctgaag gtcgggacca ggaacagggc
     1621 cgcgaaggcg gcggacagca ggatcggcgt gaggcggcgt cggagcacgg gttcctctgg
     1681 gcagggcggg aggcggcccg cggtttacgg cgtgcgaaaa tgcagggggt ccctgagact
     1741 ctgcagctcc cggtagtaat agagcggcgt cggccgcttg ccgttgaacc tcagccgcct
     1801 cagaaacgcg atctcatcct cggccacggt gccgctgagc gcgggatccc ggagaaactc
     1861 ggtgagcccg ggttcttcgc cgcccgcctc gccggctccc cgctcgacga actcgaatcg
     1921 cttcacatgc ccggagacga ccctggggtt gagcgcgatg tccagcgcga aggtcgcgag
     1981 atccacgtcc caggattcga tcatcggatc caggaacgcc acgcagtgct cccgggacag
     2041 atggaagatg tcggtatcca ggaactcgag gacgatgacc cgcatctcct cgaagcttcg
     2101 gccgctgagg tccgccacca tgcgaagcca gtactcgttg cccagctctt ccttggccac
     2161 ggccgtgagc acgtccagca gccgctgggt gacgaggcgt tccagctcgc cgaacggctg
     2221 cgcctcgaag atcgcgcgga cgtgccgttc ccggtcgggg tgacacttgc ggaggatcag
     2281 ctcgcggact tccccgaaca acggtgcggg ctcctctccc agctcccgct tcaattccgc
     2341 cttccgctga gcggtcgcca gccgcgccag ttccccgctc ggcagcttca ggaaccggtc
     2401 catcttgtca tagatgtcgg tgcggctggg agcggggggc gccttcctcc
//
LOCUS       DASUYN010000265         2156 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_306480, whole genome shotgun sequence.
ACCESSION   DASUYN010000265 DASUYN010000000
VERSION     DASUYN010000265.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2156)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2156)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2156
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_306480"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..802
                     /locus_tag="VF061_05235"
     CDS             <1..802
                     /locus_tag="VF061_05235"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX6668936.1"
                     /translation="ILELLGSGGMGVVYRAFDREVGEAVAIKALRPDLGAIDATLLER
                     FKQELRLARRITHRNVVRTYDLGEVDGIYYITMELVRGTTVATLIREAGRLDVPATLT
                     IGKQVCRALEVAHEEGIIHRDVKPQNLLVDQSGFLKVMDFGIARLAEHRSDPGQALTA
                     AGVVVGTPQYMAPEQLFGDPVDGRADLYATGAVLFECVTGRPVFEAPSLVALLARHLE
                     DTPPNPRSFNAAVPESLSAVILRALARRPDDRWSSAAELLRALEGVQV"
     gene            complement(799..>2156)
                     /locus_tag="VF061_05240"
     CDS             complement(799..>2156)
                     /locus_tag="VF061_05240"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014164.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HEX6668937.1"
                     /translation="RRPEGPRAEPFRLALSLSPRGLTMQALLPYSTHAAARALVLGVG
                     FTALTACDRSRDATESVESSAVSAAVTDSAAAPAADFKSVAAKVVQQSAAVREGEIVL
                     ISGTDEDLPLLEDIAIEVQKAGGYPLVTVNTEQFRRRTYDEVPAKYDARTPSLARKLI
                     EIEDVFITTESGEGRTMKGVPPARMAARAKAFAPVLELARKRNVRTVALGNGLYPSAE
                     RAEQFGMSREELGRLMYGGIDADYSQLQATGEQVRKALSAGKELHITNPAGTDLRVGI
                     AGRPVQVSDGVISPEDRKRGGAALSVWLPAGEVYLTPVPGTANGVIVADHLFYQGDRI
                     EGLRFEVKDGKLVGMTAKSGLDPLQEFYQLAGPGKDVFGVVDIGINPGIELPEGGAVN
                     VWSRAGAVTVVLGDNTWAGGDNQVNFAVSPEIGNATVEVDGTPLVKDGKLVAGTAVAG
                     R"
BASE COUNT          316 a          742 c          756 g          342 t
ORIGIN      
        1 catcctcgag ctgctcggct cgggcggtat gggcgtggtc taccgcgcct tcgaccgcga
       61 ggtcggcgag gcggtggcga tcaaggcgct gcgaccggat ctcggcgcca tcgacgccac
      121 gctgctggag cggttcaagc aggagctccg gctcgcgcgc cggatcaccc atcggaacgt
      181 ggtgcggacg tacgacctgg gcgaggtgga cgggatctac tacatcacga tggagctggt
      241 gcgagggacc acggtggcca ccctgatccg ggaggcgggc cggctcgacg ttcccgccac
      301 tctgaccatc ggcaagcagg tctgccgcgc cctcgaggtg gctcacgagg aaggcatcat
      361 ccaccgggac gtgaagccgc agaacctgct ggtggatcag tcggggtttc tgaaggtgat
      421 ggacttcggc atcgcgcgcc tggcggagca ccggtcggac ccggggcagg cgctcaccgc
      481 ggccggcgtg gtcgtcggga ccccgcagta catggcaccc gaacagctct tcggtgaccc
      541 ggtggatggg cgtgccgacc tctacgccac cggcgcggtg ctgttcgagt gcgtcaccgg
      601 gcggccggtc ttcgaggcgc ccagtctcgt ggccctgctc gcgcgccatc tggaggacac
      661 gcccccgaac ccgcggagct tcaacgccgc ggtcccggag tccctctcgg cggtgattct
      721 ccgcgcgctg gcccggcggc cggacgatcg ctggtccagc gcggcggagc tactgcgggc
      781 cctggagggc gtgcaggtct agcgaccggc gacggcggtt cccgccacca gctttccatc
      841 cttgaccagg ggggtgccgt ccacctccac ggtcgcgttc ccgatctccg gagagaccgc
      901 aaagttgacc tggttgtcgc ctccggccca ggtattgtca cccagcacca ccgtaaccgc
      961 gccggcacga ctccagacgt tcaccgcgcc gccctccggc agctcgatgc cgggattgat
     1021 gccgatgtcc acgaccccga agacatcctt cccgggtccg gccagctggt agaactcctg
     1081 caggggatcc aggccggact tcgcggtcat ccccaccagc ttgccgtcct tgacctcgaa
     1141 cctgagccct tcgatccggt ctccctgata gaacaggtga tcggccacga tcacaccgtt
     1201 cgccgtgccc ggcacggggg tgaggtagac ctcgcccgcc ggaagccaga ccgacagcgc
     1261 ggcaccgccc cgcttccgat cctccggcga aatgacgcca tcgctgacct ggacgggccg
     1321 gcccgcgatc ccgacccgca gatcggtgcc cgcggggttg gtgatgtgga gctccttgcc
     1381 tgccgagagc gctttccgga cctgctctcc ggtggcctgc agctgggagt aatcggcgtc
     1441 gatcccaccg tacatcaggc ggcccaactc ctcccgcgac atcccgaact gctcggcgcg
     1501 ctccgcgctg ggatacaggc cgttgccgag cgcgacggtg cggacgttgc gcttcctcgc
     1561 cagctcgagc accggcgcga aggccttggc ccgcgcggcc atccgcgccg gcggcacgcc
     1621 cttcatggtg cggccttcgc ccgactcggt ggtgatgaag acgtcctcga tctcgatcag
     1681 cttccgggcg agtgaggggg tacgggcgtc gtacttggcg gggacttcgt cgtaggtccg
     1741 ccgccggaac tgctcggtat tgacggtgac caggggatag cctccggcct tctggacctc
     1801 gatggcgatg tcttcgagca ggggaaggtc ttcgtcggtg ccagagatca ggacgatctc
     1861 gccctcgcga accgcggcgc tctgttgcac gaccttggcg gcgacggact tgaagtccgc
     1921 agcgggagcc gcggcggagt cggtgacggc ggcgctgacc gcgctggact ccacgctctc
     1981 ggtggcgtcc cgggagcggt cgcacgcggt aagcgcggtg aagccgacgc ccagcacgag
     2041 cgcgcgagcg gcggcatggg tggagtaagg cagcagggcc tgcatggtga gccccctggg
     2101 cgaaagggaa agagcgagcc ggaatggttc ggctcggggc ccttcggggc gtcgag
//
LOCUS       DASUYN010000266         4573 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_745913, whole genome shotgun sequence.
ACCESSION   DASUYN010000266 DASUYN010000000
VERSION     DASUYN010000266.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4573)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4573
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_745913"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..231)
                     /locus_tag="VF061_05245"
     CDS             complement(<1..231)
                     /locus_tag="VF061_05245"
                     /inference="COORDINATES: protein motif:HMM:NF021552.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2277 domain-containing protein"
                     /protein_id="HEX6668938.1"
                     /translation="MCRNIRTLANFDPPATEEEIRASALQFVRKLSGTTHPSHANEAA
                     FQRAVEEVTAAAQRLIDSLETRAAPRNREEEAR"
     gene            358..738
                     /locus_tag="VF061_05250"
     CDS             358..738
                     /locus_tag="VF061_05250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668939.1"
                     /translation="MRRPLVRIPVALTVSACLLTAGAAAQASDPPIPKSHFGPASSAL
                     WAPVPDRGPPVLPTVPDSAAKPDYTALGLVVGAGLGFVAGWAFYDVICEAVDNNCSDS
                     RLPHLVIGTGLGAGLGALIGSAVD"
     gene            808..1992
                     /locus_tag="VF061_05255"
     CDS             808..1992
                     /locus_tag="VF061_05255"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HEX6668940.1"
                     /translation="MLQPDALPIVHAALDALGERVDGWLLFDFRGINPIMAAVMGGEV
                     VGSRRAYVFIPRGGAPVALVHAVDAELWRGWPSVWRRIVWVRRDELTRELKALVGGKT
                     VAMEYSPGGAVPYGDYVPAGTLELVRAAGATPVSSAEVVSRYCSVWSSEDFAGHLRAA
                     AILSEIAQASLRRIGERARAGNPVDEHEVTRWILEAFDRAGLVTESAPSVSYGEHAAR
                     PHYEAPAEGSWPIVPGQLLLVDLWAKEPGRIYADQTWMAAIGTPSARALELWTVVRKA
                     RDAALGLLRERLEAGRPVAGAEADRAARSVIEAAGYGDRVVCRTGHSIDRVGLHGFGP
                     TIDDTESFDSRIIVPGVGFSVEPGIYFPGEVGLRSEVNAHARADGLDVTPADYQRELI
                     VV"
     gene            complement(2005..2457)
                     /locus_tag="VF061_05260"
     CDS             complement(2005..2457)
                     /locus_tag="VF061_05260"
                     /inference="COORDINATES: protein motif:HMM:NF023520.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3574 domain-containing protein"
                     /protein_id="HEX6668941.1"
                     /translation="MPTRTPGSLAHRARILVLAAIVPAAASCRPAGATSSAVQCAIGD
                     TALVRDVVYFGRNTPGGAELSDSAWQEYVDDVLTPRFPAGLTIWDAAGQWRGAGGKVE
                     RERSKVLSLLHPDDAGSQALVAEAVGEYKRRFAQEAVLRERVTTCSRF"
     gene            complement(2534..3934)
                     /locus_tag="VF061_05265"
     CDS             complement(2534..3934)
                     /locus_tag="VF061_05265"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX6668942.1"
                     /translation="MVGAGPNGLAAAITLAQAGLKTVLREAQPTVGGGLRCAELTLPG
                     FVHDACSAVYGVALTSPFLTSLPLDRFGLEWVHPPTPLAHPLDDGTAVMLERSLDATA
                     EGLGPGGRAWVRLHEPFVRAWTRLAPDLLAPPLRFPRAPFLMARFGLQALRPSTSVAR
                     GLGGPRAQALFAGNAAHSFLALDEPGTAAFGLLLSGAAHAVGWPIPRGGSQRFADALA
                     GYFCSLGGEIVTSAPVERLEELEGARLVLLDLTPRQVLRIAGGRLPAWYRRALERYRY
                     GSAAYKLDWALDAPVPWTAPECARAATVHLAGTFEEVVASEAAHVRGMVHERPFVLFV
                     QPTLFDPTRAPAGKHTAWAYCHVPHGYTGDASERIERQVERFAPGFRERVLARSVLTP
                     ADLERRNANLIGGDISGGVMDLRQVFARPIARSTPYRTPLRGVYLCSASTPPGGGVHG
                     MSGHQAARAALREVMR"
     gene            complement(4014..>4573)
                     /locus_tag="VF061_05270"
     CDS             complement(4014..>4573)
                     /locus_tag="VF061_05270"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HEX6668943.1"
                     /translation="RPGPRRPILFVAVTAEEKGLLGSDWFAEHPTVPTGTRIVANLNT
                     DMFLPLNPLRQLLVNGLEESDLADDVRRAAARAGVEVITDPEPERNAFVRSDQFSFIR
                     RGIPALSLKGGFALGTPEHERILRWRQERYHGVEDEVTQPVNRQAAADFNRLYPDVIL
                     EVANRSTRPAWYRTSAFRPEHTGSH"
BASE COUNT          627 a         1614 c         1668 g          664 t
ORIGIN      
        1 ccgggcctct tcctcgcggt tgcgcggcgc cgccctcgtc tccagcgagt cgatcaggcg
       61 ctgcgccgct gccgtcacct cctccactgc ccgctggaac gccgcctcgt tggcatgcga
      121 ggggtgggtg gtcccgctga gtttgcgcac gaactgcagc gccgaggccc ggatctcctc
      181 ctccgtggcc ggtggatcga agttcgccag ggttctgatg ttccggcaca tgaccgcctc
      241 ccgggatctg gtctcaggaa gctaatcccg gaccgctcgg tgcacaccgg cgtagcccgg
      301 gtcacgcgcg ggggacggcg gcgccatatg ttggggcgac cacttcaggg gccccgcatg
      361 cgtcgtcctc tggtccgcat cccggtggca ctcaccgtct cggcctgcct tctcacggca
      421 ggtgccgccg cccaggcatc cgatcccccg atccctaagt cgcacttcgg tccggcctcc
      481 tcggccctgt gggctccggt tccggaccgg ggtcctccgg tgcttccgac cgttcccgac
      541 agcgccgcca aaccggacta cacggccctc ggcctcgtgg tgggagccgg gctgggcttc
      601 gtggcgggct gggcctttta cgacgtcatc tgcgaggcgg tggacaacaa ctgcagcgac
      661 tcacgcctcc cccatcttgt catcggcacc ggcctgggcg ccgggctcgg cgctctgatc
      721 gggagcgccg tggactgagt acccgggctt cccaggaccg gaggtggcgt ctatcgtttc
      781 ggctcttcga gcctcccctg aggatgcatg ctgcaacccg acgcccttcc gatcgttcac
      841 gccgcgctcg acgccctcgg cgagcgggtg gacggctggc ttctgttcga tttccgcggc
      901 atcaacccga tcatggctgc ggtgatgggc ggcgaggtgg tgggctcccg gcgggcgtac
      961 gtcttcattc cccggggcgg cgccccggtg gcgctggtcc acgccgtgga tgcggagctc
     1021 tggcgcggtt ggccctcggt ctggcgccgg atcgtgtggg tgcggcgtga cgagctgact
     1081 cgcgagctga aggcgctggt cggcgggaag accgtggcca tggagtactc gcccggcggc
     1141 gcggtgcctt acggcgacta cgtgcccgcc ggcaccctgg agctggtgcg cgccgccggc
     1201 gcgacgccgg tctcctccgc ggaggtggtc tcccgctact gctccgtctg gtcgtcggag
     1261 gatttcgcgg gtcacctccg ggcggccgcg atcctcagcg agatcgcaca agcctcgctc
     1321 cggcggatcg gcgagcgcgc ccgcgccggc aatccggtgg acgagcacga ggtcactcgc
     1381 tggatcctgg aggcgttcga tcgcgcggga ctggtcaccg agtcggcacc cagcgtctcc
     1441 tacggcgagc acgccgcccg gccgcactac gaggcaccgg ccgagggctc ctggccgatc
     1501 gtgccgggac agctgctgct ggtggacctc tgggcgaagg agccggggcg catctatgcc
     1561 gatcagacct ggatggcggc gatcggcacg ccgtcggcca gggcgctgga gctgtggacc
     1621 gtggtccgga aggcacggga tgccgcgctc ggactgctgc gggagcggct ggaggcgggt
     1681 cgtcccgtgg cgggggcgga agccgaccgc gcggcgcgga gcgtgatcga ggctgccggc
     1741 tacggcgacc gggtcgtctg tcgcaccggc cactcgatcg accgggtcgg gctccacggc
     1801 ttcggaccca cgatcgacga cacggaaagc ttcgattccc ggatcatcgt gcccggcgtg
     1861 ggcttctcgg tggagccagg catctacttc cccggtgagg tcgggctccg gagcgaggtg
     1921 aacgcgcacg cccgcgccga tgggctcgac gtgacccccg ccgactatca gcgcgaactg
     1981 atcgtcgtgt agcgaaaggc gggatcagaa tcgggagcag gtcgtcaccc gctcccgcag
     2041 caccgcctcc tgcgcgaacc ggcgcttgta ctctccgacc gcctcggcga cgagcgcctg
     2101 cgagccggcg tcgtccggat gcagcaggct gagcaccttg gaccgctccc gctctacctt
     2161 cccgccggct ccccgccact gaccagccgc gtcccagatc gtgagccccg ccgggaacct
     2221 cggcgtgagc acgtcgtcca cgtactcctg ccaggcgctg tcgctcagct cggcgccacc
     2281 gggcgtattg cggccgaaat agacgacgtc ccggaccagc gcggtgtcgc cgatcgcgca
     2341 ctggacggcg gaggaggtcg cgcccgcggg tcggcaggag gccgcggccg ggacgatggc
     2401 cgccaggacg aggatccgcg cgcggtgggc gagggaaccg ggagtgcggg tgggcacgac
     2461 gagcttcctc tggtgtaggt caccagggaa ggcgcagaat ggcccggcgt ccggccacgg
     2521 cgccgattcc cgcctagcgc atcacctcgc ggagcgcggc ccgcgccgcc tgatgtccgc
     2581 tcatcccgtg cacgccgcct cccggcgggg tggaagcgga gcagagatag acgcctcgca
     2641 acggggtgcg atagggcgtc gaccgcgcga tgggccgggc gaagacctgg cgcaggtcca
     2701 tcacccctcc gctgatgtcg cccccgatga ggttggcgtt gcgccgctcg aggtccgccg
     2761 gcgtgagcac gctccgagcg agcacccgct cccggaatcc cggcgcgaac cgctcgacct
     2821 gccgctcgat ccgctcggag gcgtcgccgg tgtacccgtg ggggacgtgg cagtacgccc
     2881 acgccgtatg cttgccggcg ggcgcgcgag tgggatcgaa cagcgtgggc tggacgaaga
     2941 gcacgaaggg acgctcgtgc accatgccgc ggacgtgggc cgcttccgag gcgacgacct
     3001 cctcgaacgt cccggccagg tgcaccgtcg ccgcccgggc gcactcgggc gcggtccagg
     3061 ggaccggcgc atcgagggcc cagtccagct tgtaggccgc ggagccgtag cggtaccgct
     3121 ccagcgcgcg ccggtaccac gcgggcagcc ggccccctgc gatacgcagc acctgcctgg
     3181 gcgtgaggtc caggaggacg aggcgcgccc cctccagctc ctccagtcgc tccaccgggg
     3241 cggaggtgac gatctccccg ccgagggagc agaagtagcc cgcgagcgca tcggcaaagc
     3301 gctgcgagcc tccccggggg atcggccagc ccaccgcgtg agccgccccg gagagcagga
     3361 gtccgaacgc cgccgtgccg ggttcatcca gtgccaggaa cgaatgggcc gcgttcccgg
     3421 cgaacagcgc ctgcgcccgg gggccgccca ggccgcgcgc caccgacgtg gacgggcgga
     3481 gggcctggag gccgaagcgc gccatgagga agggtgcgcg ggggaagcgg agtggcgggg
     3541 ccagcaggtc gggcgcgagg cgggtccacg cgcgaacgaa cggctcgtgg agccggaccc
     3601 aggcccgtcc tccgggtccg agtccctccg ccgtggcgtc cagcgagcgc tccagcatga
     3661 ccgcggtgcc gtcgtcgagc gggtgtgcca gcggggtcgg gggatgaacc cactccaggc
     3721 cgaaacggtc gagcggcagc gaagtgagaa agggtgaggt cagcgccacc ccgtacaccg
     3781 cggagcaggc atcgtgcacg aagcccggca gcgtgagctc cgcacagcgg aggccacctc
     3841 ccaccgtggg ctgagcctcc cgcagcaccg tcttcagccc ggcctgtgcc agcgtgatcg
     3901 cggccgccag cccgttcgga cctgctccga ccacgacggc gtccggaatg agacctcctt
     3961 acagctcgag tgtcaccggt cgtgctcccc gtagagtagc agcatccgtg aggtcagtgc
     4021 gagccggtgt gctccggacg gaacgcgctg gtgcgatacc aggcgggtcg cgtgctgcgg
     4081 ttggcgactt cgagaatcac gtcgggatac aggcgattga agtcggccgc ggcctgccgg
     4141 ttgaccggct gggtgacctc gtcctccacg ccgtggtagc gctcctggcg ccaacgcaga
     4201 atgcgctcgt gctccggcgt ccccagcgcg aacccgccct tgagcgagag tgcgggaatc
     4261 ccccggcgga tgaagctgaa ctggtcgctc cgcacgaatg cgttccgctc cggctcgggg
     4321 tcggtgatca cctcgacgcc ggccctggcc gccgcgcggc ggacgtcgtc ggccaggtcc
     4381 gactcctcca ggccgttcac cagcagttgc cgcaggggat tgagcggcag gaacatgtcg
     4441 gtgttgagat tggcgacgat gcgggtgccc gtcggtacgg tcgggtgctc ggcgaaccag
     4501 tccgagccca ggaggccctt ttcctccgca gtgacggcga cgaagaggat ggggcgccgg
     4561 ggccccggcc ggc
//
LOCUS       DASUYN010000267         2110 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_527055, whole genome shotgun sequence.
ACCESSION   DASUYN010000267 DASUYN010000000
VERSION     DASUYN010000267.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2110
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_527055"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1106)
                     /locus_tag="VF061_05275"
     CDS             complement(<1..1106)
                     /locus_tag="VF061_05275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668944.1"
                     /translation="MRPVAPAGDTTPPATALPEVPPVRGPLQLRVVYPAPDAVVRAKD
                     SSFLLGSVGTGDARLTINGNPVRVWPNGAWLAWIPLPPDSLMRFRIVATTGTESAALD
                     HDIRRGGWAPAPAPGLWLDSASLAPRGRVWWPAEEYLTLSVRASEGATVRMVLPDSTI
                     VPLRPQSRLEDVPEAIRAFDLDTANLSTAVRRDRYVGVFRGRALGPSPGPVLPGPWSP
                     PVAAGLLPDSALWPVVEAIQGGDTVRARWPLQVALLDTLPDIVEMDDDSAGTGLTDRI
                     TVGRAVPGGTYHWFFPNGTRAAVSGRMNDDLRLRLAPESEAWISAAEARPVPGVTAAP
                     AVVGSMRLTPMADRVRLRIPLSHRVPYQVTEGDR"
     gene            1323..>2110
                     /locus_tag="VF061_05280"
     CDS             1323..>2110
                     /locus_tag="VF061_05280"
                     /inference="COORDINATES: protein motif:HMM:NF025053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase 2C domain-containing
                     protein"
                     /protein_id="HEX6668945.1"
                     /translation="MTSAPVRVSVFGKTDLGLTRDHNEDTFLVADLSAGNASLHPDVR
                     NHEVGPRGSLFMVADGMGGAAAGELASAMAAQVIYQHLATAWAEDPEVSAARFAFRMK
                     EAVELANHRIYGYAREHPDVRGMGTTVTAAGVFGDEVYLAQIGDSRGYLVRNGEAFQL
                     TRDQSLTQRLVDAGELTEEEAEHSERRNIILQALGPDPRVKVDLSRQRLRRGDTLILC
                     SDGLSGVVRREEFAQQVTGSPDLPTLCSSLIDLANERGGPDNVTV"
BASE COUNT          317 a          758 c          758 g          277 t
ORIGIN      
        1 ctgcgatcgc cctccgtcac ctggtacggc acccggtgac tgagggggat gcgcagccgt
       61 acgcgatccg ccatcggggt gagccgcatc gagccgacca cggccggggc tgccgtcacg
      121 cccggcaccg ggcgtgcttc ggcggcggag atccatgcct ccgactcggg ggcgaggcgg
      181 aggcggaggt cgtcgttcat ccgcccgctc accgcggccc gggtcccgtt cggaaagaac
      241 cagtggtagg tgccgccggg aacggcgcga cccaccgtga tccggtcggt gagtcctgtg
      301 cccgcgctgt cgtcgtccat ctcgacgatg tcggggaggg tgtccaagag cgcgacctgt
      361 agcggccagc gcgcccggac ggtgtcgcca ccctggatcg cctcgaccac cggccagagc
      421 gcggagtcgg gcagcagacc cgcggccacc ggcggcgacc agggcccggg cagcacgggg
      481 cccgggctgg gtcccagcgc ccggccgcgg aatactccta cgtagcgatc gcgccggacg
      541 gcggtgctga gattggcggt gtccaggtcg aacgcccgga tcgcttcggg gacgtcctcg
      601 aggcgcgact gcggcctgag gggtacgatc gtgctgtcgg gaagcaccat ccgcacggtg
      661 gcgccctcgc tcgcgcggac ggagagcgtc aggtactcct ccgcgggcca ccacacccgg
      721 cctctcggcg cgagcgaggc cgaatcgagc cacagtcccg gcgccggggc cggcgcccac
      781 ccgccgcggc ggatgtcgtg gtcaagagcg gccgattcgg ttccggtcgt ggccacgatg
      841 cggaaccgca tgaggctgtc cggcggcagc gggatccagg cgagccaggc gccgttgggc
      901 cagacgcgca ccgggttgcc gttgatggtg agtctggcat caccggtgcc gaccgagccc
      961 agcaggaagc tcgaatcctt ggcgcgcacc accgcgtccg gcgccggata cacgaccctg
     1021 agctggagcg ggccccggac cggcggcacc tccggcagcg ccgtggccgg aggcgtcgtg
     1081 tcccccgcgg gagcgaccgg acgcatgtcc acggcaggcg tggcaggtgg agggggggct
     1141 gggcgggtgc aggcggccaa tccggccagc agcgcgagca gcgcctggcc ccgagcggaa
     1201 accattgctg caaggtatct ggtgactatc acttacgcca cgcggacgtt gacgctccca
     1261 acccctgccc gtagattcgg gacactccgc tacccagtgg aactttggag ggcctcaccc
     1321 gagtgaccag cgctccggtc cgcgtgtccg tcttcggcaa gaccgacctg ggactcaccc
     1381 gggatcacaa cgaggacacc ttcctcgtcg ctgacctcag cgccggcaac gccagcctgc
     1441 atcccgacgt gcgcaatcac gaggtggggc cgcgcggctc gctgttcatg gtcgccgacg
     1501 gcatgggcgg cgcggccgcg ggcgagctcg cgagcgccat ggccgcgcag gtcatctacc
     1561 agcatctcgc caccgcctgg gccgaggatc ccgaagtcag cgcggcccgc ttcgcgttcc
     1621 ggatgaagga ggcggtggag ctggccaacc atcgcatcta cggctacgcc cgcgagcacc
     1681 ccgatgtgcg aggcatggga accacggtca ccgcggccgg ggtcttcggc gacgaggtct
     1741 acctcgccca gatcggcgac agccgcggct acctcgtccg caacggcgag gccttccagc
     1801 tcacccggga tcagtcgctc acccagcggc tggtggacgc cggcgagctg accgaggagg
     1861 aggccgagca cagcgagcgc cgcaacatca tcctccaggc gctgggaccc gaccctcggg
     1921 tgaaggtgga cctgagccgg cagcggctcc gccgcggcga cacgctgatc ctctgctccg
     1981 acggcctctc cggcgtcgtg cgccgggagg agtttgccca gcaggtgacg ggcagccccg
     2041 atctgccgac cctgtgcagc tccctgatcg acctcgccaa cgagcgcggc ggtcccgaca
     2101 acgtcaccgt
//
LOCUS       DASUYN010000268         7168 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_969446, whole genome shotgun sequence.
ACCESSION   DASUYN010000268 DASUYN010000000
VERSION     DASUYN010000268.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7168)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7168)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7168
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_969446"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(400..1527)
                     /locus_tag="VF061_05285"
     CDS             complement(400..1527)
                     /locus_tag="VF061_05285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668946.1"
                     /translation="MRLLVSRLARALTPALAGGSAALGCAVPTHSTRLADSPEPVELR
                     MDTPVLHGGQEAVVVIRSPSADSISLISDNGVDRYWSGGPRLLARLTGDFGDPMPLRR
                     YAERRNGVLLDHLKKPATISVCRRGTCREFHHDFVVRLPERNQRTVALSGGWNTVFAR
                     RTVTGHSQGPLFHEALSSGVFFVEGELAATAWSGRVQGFYGEGGHGASLDLSRVVKQG
                     GDVSYGIAMHVEARRNEWLPDGSRPALADRTAYGVSLGPSIMMRGVTASSQFGVLTNG
                     RETLQVIGTRISANGRLTSVRIPVSVTAEKSFAFGGGPIVSRRRDALERLSASVHLVE
                     SFALNFGVSSHRIAWPGDRPSMDLRASEMLLTMGGRYTLTW"
     gene            1681..3144
                     /locus_tag="VF061_05290"
     CDS             1681..3144
                     /locus_tag="VF061_05290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668947.1"
                     /translation="MSGESPRPSQPTPVETSGLRGARLAARVRQALYHLSAPELAAAH
                     ERMREAGVKRHLEYFHDGRVEAIRVLPCPITLLPQQLAYLHSVARTLHHALLRLPELY
                     LGDPAAREVLRLEPAEDEWLRACWTPAVQARNPVFDRLDCLVDYASPIWKDTLRFVEP
                     NLTGVGGLYLVPAVEEVVEEVVVPLLAARDPGLRITRLTDARTLLLRELVEHLEVLGR
                     PGGTICLVEPKYELEGIDEQRRLVEHYGDRHGIRMLHADPSELRMKGGEVYCGDCAVD
                     LVYRDYAVLDLADLAEGGWDPEPMRRLFRENRVVSSISAELDCKACFEILTDPVLSER
                     YYTEDERRVFQHHVLWTRVVRDRRTTLPGGESGDLLEFVRREREWLVLKPSRGYGGEG
                     VVLGQTVGDGEWCGALDAALADEELWVVQRLAQIPVVEVPTLTPEGDLQPEAFYHVMG
                     FASTDDGIAILARASQRQVVNVAQRGGMAAVMLVEEA"
     gene            complement(3146..5005)
                     /gene="nagB"
                     /locus_tag="VF061_05295"
     CDS             complement(3146..5005)
                     /gene="nagB"
                     /locus_tag="VF061_05295"
                     /EC_number="3.5.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004342 - glucosamine-6-phosphate
                     deaminase activity [Evidence IEA];
                     GO_process: GO:0006046 - N-acetylglucosamine catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate deaminase"
                     /protein_id="HEX6668948.1"
                     /translation="MADHASSLERIPTIIVADHDELGRLVASRIADLIRTRAGTGRQT
                     VLGLATGSTPIGVYRELIRMHREDGLSFARVVTFNLDEYYPMDPASVHSYHRFMWENL
                     FSQLDLPAEQVHMPRGDLPRDQVEEECRRYEEAIRAAGGIDLQLLGIGRTGHIGFNEP
                     GSGLDSRTRLITLDLVTRKDAAADFFGEDNVPREAVTMGVGTILEAREIVILATGEHK
                     AYIVRRAVEGEVDHEVAATFLQRHPATTFYLDGAAGAQLTRMATPWLLGPVEWTAPLT
                     VKAVTWLSRETEKGVLKLTQRDYAEHRLSSLVAAHGSPGALNGLVFNALGAKIRGRSK
                     LPRERRVICFSPHPDDDVISMGGILRKLVENRNAITVAYMTSGNLAVFDHDVRRHLDF
                     LSRVAGESGLAEGVVSRLVEQVEEFLAAKQPGDVDIEEVRDIKRLIRESEAVAGLRTL
                     GLEEGAARFLDLPFYQTGKVRKDPIGPADVAIVRDLLQGLRPDLIFVAGDLSDPHGTH
                     RMCKEAIDRALAECVAAGLPRPEVWLYRGAWQEWPVTEATWLVPLSQEELRLKIQAIF
                     KHQSQKDTAPFPGPDEREFWQRVEARNKGTAAELDRLGLAEYFAMEAYVVDPE"
     gene            5199..6047
                     /locus_tag="VF061_05300"
     CDS             5199..6047
                     /locus_tag="VF061_05300"
                     /inference="COORDINATES: protein motif:HMM:NF012981.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HEX6668949.1"
                     /translation="MNASSGSAKAAIEALERSPGFDIRLTTAAQYVVALRRVVSEGTP
                     RVLVAGGDGTLASAAAVLAGTSTALAVLPGGTLNHFARDHGIPSDLDEALRVAEQGPV
                     RSVDVGYLNDQLFLGTSSVGAYVRFVQTRDRLERFLGYWLASAAAGVRILRTLRNIRV
                     TLEAEGETRVYRAPLVFIAVGERGLGPPHLGRLVGDPGGALHVVVPRGRRQARRFARA
                     YATFSRGLEVEAKPLGLDSALVERLTLDLPMRVVKVAMDGEIRRQRTPLEYRLARGAL
                     SLVVPS"
     gene            complement(6042..>7168)
                     /locus_tag="VF061_05305"
     CDS             complement(6042..>7168)
                     /locus_tag="VF061_05305"
                     /inference="COORDINATES: protein motif:HMM:NF012544.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HEX6668950.1"
                     /translation="AFAEVASRFSRAGGTYLYARVAFGRFAGIEMAWLTYLVRLTAAA
                     TNANLFVIYLAEFWPRATAPVESRVLLALVLFPLVVANYRGVRGGVGTSTVFAVAKLA
                     PLAVFVLAGLFVMATGGGSPAPPRAVAADAGTWLEAILLLVFAYGGFESALLPLGEAK
                     NPRRDAPVALFTALGLCALLYTLVQLVVLTMLADPAASDRPLAAAAQVFLGPAGAALM
                     AAGALVSVYGYLAAAMVNVPRLIYAMAAEGDLPPRLAAVHPRFRTPHISVAAFAMTVW
                     AFAAAGGFLGNLSLSAVSRLLTYGMVSVALVALRRRERAGGAVEPAWFRVPAGGLVAA
                     LGLGFSAVLALRMRQLELVVLGGTLVCGLVHWIWMRRRDL"
BASE COUNT         1087 a         2500 c         2565 g         1016 t
ORIGIN      
        1 tgacgacgtt gatcgtgtcg ataaaaaaat ccctcttgac acgtcgtgat cgacgtcgta
       61 ctgtagcctc ccctcgatgc tgcaaggctt cgaggtgagt cgctcatcaa gcggtgtatt
      121 gatggacgac ctaggcaggt cgcaggacgc tgcgcacctg tcgctcacag ggagatcagc
      181 cctcgtgaga cgatcgcgag ctcgccggcc gcgatcgaac gcccgagcag ggctcgggta
      241 acccgaccgt caccgcacgg tccgggcaag ggaaatcggg tcggtcgcca cacgtggcgg
      301 caactgatcc agcgaaccga tccccgccgg cgacagaacc tcccgactcg cgacgtgtgg
      361 cgtttcggga ggtttttgtt ttctcttgtt tgcccgccat caccacgtca gcgtatagcg
      421 tccccccatc gtcagcagca tctccgacgc ccggaggtcc atggacggac gatcacccgg
      481 ccacgcgatg cggtggctgc tgaccccgaa gttgagcgcg aaggactcga ccaggtgcac
      541 cgacgccgag agtcgctcca gggcgtcccg gcgccgcgag acgatcggcc ccccgccgaa
      601 ggcgaacgac ttctccgccg tcacgctcac cgggatccgc accgaggtca gccgcccgtt
      661 ggccgagatg cgggtgccga tcacctgcag ggtctcccgg ccgttcgtca gcacgccgaa
      721 ctgcgagctc gccgtgacac cccgcatcat gatgctgggc ccgaggctca cgccgtaggc
      781 ggtccggtcc gccagcgcgg gccggctgcc gtcgggcagc cactcgttcc tccgggcctc
      841 gacgtgcatc gcgatgccgt agctgacgtc gccgccctgc ttcacgaccc ggctcaggtc
      901 cagcgacgca ccgtgcccac cctcgccgta gaatccctgc actcgcccgc tccacgccgt
      961 ggcggccagc tcgccctcga cgaagaacac gccgctgctc agggcctcgt ggaacagcgg
     1021 cccctggctg tgaccggtca ccgtgcgccg ggcgaagacc gtgttccagc ctccgctcag
     1081 cgccacggtc cgctggttcc gctccggcag gcgaaccacg aagtcgtggt ggaactcgcg
     1141 gcaggttccc cggcggcaga ccgagatggt ggcgggcttc ttcaggtggt cgagcagcac
     1201 cccgttccgc cgctcggcgt accggcgcag gggcatcggg tcaccgaaat cgccggtcag
     1261 gcgcgcgagc aggcgggggc cgccgctcca gtagcggtcc accccgttgt ccgagatcag
     1321 cgagatgctg tcggcggagg ggctcctgat gacgacgacc gcctcctggc cgccgtgcag
     1381 caccggcgtg tccatcctca actcgaccgg ctccgggctg tccgcgaggc gggtcgaatg
     1441 ggtgggcacc gcgcatccga gcgcggcact cccgccagcg agggcgggcg tgagggcgcg
     1501 ggcgagcctg gagacgagca gtcgcatgtg ccgcactgag caatccggtg gctgaccagg
     1561 tcgacggcgg aaggcgggga caacgcttcc acccccatca tatcgccgga tcccgaaagc
     1621 agccaggccc tcggtcgcgc cttgcgcccc cggctcgcga caggtcacat tcgctcggtc
     1681 atgtccggcg agtcccccag accatcccag cccacgcccg tcgagacctc cggtctccgc
     1741 ggcgcccgtc tggctgcccg ggtgcggcag gcgctctacc acctgtccgc gccggagctc
     1801 gcggccgccc acgagcgcat gcgggaggcg ggggtgaagc ggcacctgga gtacttccac
     1861 gacgggcggg tggaggcgat ccgggtgctg ccctgcccca tcacgctgct gccgcagcag
     1921 ctggcgtacc tgcattccgt cgcccggacc ctccaccatg cgctgctccg gctgcccgag
     1981 ctctacctgg gtgaccccgc cgcgcgcgag gtgctgcggc tcgagccggc agaggacgag
     2041 tggctgcgcg cctgctggac gcccgcggtt caggcccgca accccgtctt cgaccgcctc
     2101 gactgtctgg tggactacgc cagccccatc tggaaggaca cgctccggtt cgtggagccg
     2161 aatctcaccg gtgtgggggg actctacctg gttccggcgg tcgaggaggt ggtggaggag
     2221 gtggtggtgc ctctcctcgc ggcccgcgat ccgggcctgc gcatcaccag actgacggac
     2281 gcacggacgc tgctcctgcg ggagctggtg gagcacctgg aggtgctggg ccgccccggc
     2341 gggaccatct gtctggtgga gcccaagtac gagctggagg ggatcgacga gcaacgccgg
     2401 ctggtggagc actacggcga ccggcacggc atccgcatgc tgcacgccga tccgagcgag
     2461 ctcaggatga aaggcggcga ggtctactgc ggcgactgcg ccgtggacct ggtataccgc
     2521 gactacgcgg tgctcgatct cgcggacctc gcggagggtg gctgggaccc ggagccgatg
     2581 cgccggctgt ttcgggagaa ccgggtggtc tcgtccatct ccgcggagct ggactgcaag
     2641 gcgtgcttcg agatcctgac cgacccggtg ctgagcgagc ggtactacac cgaggacgag
     2701 cgccgggtct tccagcacca cgtgctctgg acccgcgtcg tgcgggaccg gcgcaccacg
     2761 ctcccgggcg gggagagcgg agacctgctc gagttcgtgc ggcgggagcg cgagtggctg
     2821 gtcctgaagc cgtcacgcgg ctacggaggc gaaggggtgg tgctgggtca gaccgtgggg
     2881 gacggggaat ggtgcggcgc cctggacgcc gcgctggcgg acgaggagct ctgggtggtc
     2941 cagcgactgg cgcagatccc ggtggtggaa gtgccgaccc tgacccccga aggcgacctg
     3001 cagccggagg cgttctacca cgtcatgggg ttcgcgtcca ccgacgatgg gatcgcgatc
     3061 ctcgcgcggg cgtcgcagcg gcaggtggtg aacgtggcgc agcgcggggg gatggcggcg
     3121 gtgatgctgg tcgaggaggc gtgagctact ccgggtcgac gacgtaggcc tccatcgcga
     3181 agtactccgc cagccccagc cgatccagct cggcggccgt gcccttgttg cgcgcctcca
     3241 cccgctgcca gaactcgcgt tcatccggtc ccgggaacgg cgccgtgtcc ttctgggact
     3301 ggtgcttgaa gatcgcctgg atcttgagcc gcagctcctc ctgcgacagc ggcaccagcc
     3361 aggtcgcctc cgtgacgggc cactcctgcc acgccccgcg gtagagccac acctccggcc
     3421 gcggcagccc cgccgccacg cactccgcca gcgcccggtc gatggcctcc ttgcacatgc
     3481 gatgggtgcc gtgcgggtcg gacaggtcgc ccgccacgaa gatgaggtcg ggccgcaggc
     3541 cctggagcag atcgcgcacg atggcgacgt ccgccgggcc gatggggtcc ttccgcacct
     3601 tgccggtctg gtagaacggg aggtcgagga accgggccgc tccttcctcc aggccgagcg
     3661 tcctgaggcc cgccaccgcc tccgattcgc ggatcaggcg cttgatgtcg cgcacttcct
     3721 cgatgtccac gtcgcccggc tgcttggcgg ccaggaactc ctccacctgc tccaccaggc
     3781 ggctcaccac cccctccgcg agaccgcttt cgcccgccac ccgggacagg aagtcgaggt
     3841 gtcggcgcac gtcgtggtcg aacaccgcca ggttgccgct cgtcatgtag gcgacggtga
     3901 tcgcgttccg gttctcgacc agcttgcgca ggatcccgcc catcgagatc acgtcgtcgt
     3961 cgggatgggg agagaagcag atgacgcgcc gctctcgggg cagcttggag cgcccccgga
     4021 tcttggcgcc gagcgcgttg aagacgagac cgttgagcgc ccccggactg ccgtgcgccg
     4081 ccaccagcga ggagagccgg tgctcggcgt agtcgcgctg cgtgagcttg aggactccct
     4141 tctcggtctc gcgagagagc caggtgaccg cctttaccgt gagcggcgcg gtccattcca
     4201 ccggaccgag aagccagggc gtggccatcc gggtcaactg cgcgccggcc gcgccgtcga
     4261 ggtagaaagt cgtggcgggg tggcgctgga ggaacgtcgc ggccacctcg tggtccacct
     4321 cgccctcgac cgcacggcgc acgatgtacg ccttgtgctc gccggtggcg aggatgacga
     4381 tctcccgggc ctcgaggatg gtgcccacgc ccatcgtcac cgcctcgcgg ggcacgttgt
     4441 cctcgccgaa gaagtcggcc gcggcgtcct tgcgggtgac caggtcgagg gtgatgagtc
     4501 gggtccggct gtcgaggccg gagcccggct cgttgaagcc gatgtggccg gtgcggccga
     4561 tgcccagaag ctgaaggtcg atcccgccgg cggcgcggat cgcctcctcg tagcggcggc
     4621 actcctcctc cacctggtcg cgcggcaggt cgccgcgggg catgtgcacc tgctccgccg
     4681 gaaggtcgag ctgggaaaag agattttccc acatgaaccg gtggtaggag tgcacgctgg
     4741 ccgggtccat ggggtagtac tcgtccaggt tgaacgtcac cacccgggcg aagctcaacc
     4801 cgtcctcgcg gtgcatccgg atcagctcgc ggtacacgcc gatcggggtg gagcccgtgg
     4861 ccaggccgag cacggtctgc cggccggtgc cggctcgcgt ccggatcagg tccgcgatcc
     4921 ggctcgcgac gagccggccg agctcgtcgt ggtcggcgac gatgatggtg gggatgcgct
     4981 cgagagagga ggcgtggtcc gccatggttg agccgaacgt aacgaaggac tggatggggg
     5041 cacaactctg gtggcggaag gcagtctccc gagtgacttg gctcaccacg gccggcggcc
     5101 ggcccgccgc attatcgggg cacctcagcc aggcgaagac catggcagcc ccggcaggag
     5161 cccggcgggc cgcggcgagc gctgcgatcc ccgccttcgt gaatgctagc agcggaagcg
     5221 ccaaggccgc gatcgaggcg ctggagcgga gcccggggtt cgacatccgg ctcaccaccg
     5281 cagcgcagta cgtggtggcg ctccggcggg tggtctccga gggcacgccc agagtgctgg
     5341 tcgcgggggg cgatgggacc ctcgcctccg cggccgcggt actggccggc acctcgacgg
     5401 cgctggcggt ccttccgggg ggaacactca accacttcgc gcgcgaccac ggcatcccgt
     5461 ccgacctcga cgaagcgttg cgggtcgccg agcagggacc cgtccggtcg gtggacgtgg
     5521 gctacctgaa cgatcagctc ttcctcggca ccagctccgt cggcgcgtac gtgcggttcg
     5581 tgcagacccg cgaccggctg gagcgctttc tcggctactg gctggcgagc gcggcagcgg
     5641 gcgtccggat cctgcggacg cttcgaaaca tcagggtgac gctggaggcg gagggcgaga
     5701 cccgggtcta tcgggcgccg ctggtcttca tcgcggtcgg ggagcggggg ctgggtccac
     5761 cccacctcgg tcggctggtg ggagatccgg gaggcgcgct gcacgtggtg gtcccgcgag
     5821 ggcgccgaca ggcgcggcgg ttcgcgcggg cctacgccac cttcagccgg ggcctggagg
     5881 tcgaggcgaa gccgctcggc ctggacagcg cgctggtgga gcgcctgacc ctggacctgc
     5941 cgatgcgagt ggtgaaggtg gcgatggacg gagagatccg gcgtcagcgg acgccgctcg
     6001 agtaccggct cgcgcggggc gcgctgagcc tggtcgtgcc ctcataggtc tcgccgccgc
     6061 atccagatcc agtgcaccag gccgcacacg agcgtgcccc ccaggacgac gagctccagc
     6121 tgcctcattc tcagcgcgag cacggccgag aacccgaggc cgagggctgc gaccagccca
     6181 ccggcgggca cgcggaacca ggccggctcc acggcaccgc cggcgcgctc tctccgcctg
     6241 agcgccacca gcgcgacgga caccatcccg taagtcagca gccgcgagac ggccgagagg
     6301 gagaggttgc ccagaaagcc gccagcggcc gcgaaggccc agaccgtcat ggcgaacgcc
     6361 gcgaccgaga tgtggggcgt ccggaagcgt ggatggaccg cggcgagccg gggtgggagg
     6421 tcgccctcgg cggccatggc gtagatcagc cgcggcacgt tgaccatcgc ggccgcgagg
     6481 tagccgtaaa ccgataccag ggcgcccgcg gccatgagcg ccgcccccgc tgggccgagg
     6541 aacacctggg cggctgccgc gagcgggcgg tcgctcgcgg cgggatccgc cagcatggtc
     6601 agaaccacca gctgcaccag ggtgtacagc agcgcgcaga gacccagcgc cgtgaacaag
     6661 gcgaccggcg catcgcgtcg cgggttcttc gcctcgccca gcgggagcag ggccgactcg
     6721 aagccgccgt aggcgaatac caggagcagg atggcctcca gccaggtacc ggcatcggcc
     6781 gcgaccgcgc ggggcggcgc gggcgacccg ccaccggtcg ccatgacgaa caagcccgcg
     6841 agcacgaaga cggcgagcgg cgcgagcttc gccacggcga acacggtgct ggtgccgaca
     6901 ccgccgcgga ccccccgata gttcgccact accagcggaa acagcaccag cgccagcaac
     6961 acccgcgatt ccacgggcgc cgtggcccgg ggccagaact ccgccagata aatgacgaag
     7021 aggttggcgt tggtggccgc cgccgtgagg cggacgaggt aggtgagcca cgccatctcg
     7081 atgccggcga accgcccgaa cgccactctg gcgtacaggt aggtgccccc ggcccgactg
     7141 aaccggctcg ccacctccgc gaacgcgg
//
LOCUS       DASUYN010000269         4443 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1190110, whole genome shotgun sequence.
ACCESSION   DASUYN010000269 DASUYN010000000
VERSION     DASUYN010000269.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4443)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4443)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4443
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1190110"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..907)
                     /locus_tag="VF061_05310"
     CDS             complement(<1..907)
                     /locus_tag="VF061_05310"
                     /inference="COORDINATES: protein motif:HMM:NF012722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HEX6668951.1"
                     /translation="MRLSFHQRILLILICLGAIPTAAAIVGWGLTLRSARPAAGPRDA
                     LEEVGGTGRTLLRTVDTTDLSRAERDALAAHAAALNSAIGRFQRVETYNRYYYAGLGI
                     AVFLLGAAALYASVRLGGHLSRQLSRPIEELIGWTGHIRRMEPLPADKPRRGAPEFAA
                     LRTALREMAEALERGRAEAIEAERLRAFRETARRVAHEMRNPLTPIRLAVAQLARSPS
                     PSTREAVDVLTAETERLELLAREFTEFGRLPEGPAAPVDLCELLEELARTSVPPPMTA
                     KLTLDRATPVLSGHYDPLRRAFANII"
     gene            complement(868..2139)
                     /locus_tag="VF061_05315"
     CDS             complement(868..2139)
                     /locus_tag="VF061_05315"
                     /inference="COORDINATES: protein motif:HMM:NF016763.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA];
                     GO_process: GO:0046677 - response to antibiotic [Evidence
                     IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HEX6668952.1"
                     /translation="MTTVRGLAALLAGVGLLAILGLTLSPNPQQAEVADLTPLLCLVC
                     GEAGGTDVVLNLLLFMPMAAGLALLGWPWGRVAAVCALLSLGVETAQYFPLTGRDASL
                     SDVLTNTTGGAAAAAIAMRLERLLAPGPALARRLSLTAAAAWLGILALTALSLRPWAP
                     PGRLRNYCTPSFPTSEVFAGTARAMTLNGVALACDRDVPHGTTVSRELHRGAVALETV
                     AAAGEPSGGRKVIHLVRGPTASAVVLAQHGRSAEFQAPTAAQAIRMFAPVVRLSRAFP
                     SRAGQPVELVAQVDGRRLRLAAAHESGRRSVELALSPSYGWTLLFSPGIEPGVRLRMT
                     AALWLGMLILPAAYWAGFVARPLGAFGALGGVVIAGLGLLPAVSGFEAVHWSEWLGAG
                     GGIALGWALARIAAYLLSRCGSPSTSAYSSS"
     gene            complement(2145..2933)
                     /locus_tag="VF061_05320"
     CDS             complement(2145..2933)
                     /locus_tag="VF061_05320"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX6668953.1"
                     /translation="MSADWALSLFRKSVLKQEKYRRITDLMDDPVGRRCLDIGADNGV
                     ISLLLRRRGGQWASADLDEHTVASIRELVGDDVHRLDGARSPFPDRTFDQVVVVDYLE
                     HIPDDGAFAGELARILKPGGRVIINVPHLKPRSLVNRFRHAIGLTDEWHGHLRPGYSL
                     EGIRRLLGPRFEVERAVTYSKAFSELVDTGLNGLYLAMQRGAGEARGSSKGTVVTGAE
                     VRKRRKQFLLLSALYPFLWGMAKLDTLLWLQPGYKLIVRARLAS"
     gene            complement(2930..4150)
                     /locus_tag="VF061_05325"
     CDS             complement(2930..4150)
                     /locus_tag="VF061_05325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668954.1"
                     /translation="MRRLWRSATLRSVAVLGLSGLGFAVANLVLARALPTEEYAILTL
                     VVALVNVGYPLAAAGVDGVVNRRRVEAGPRLLRRLLHSLVPVALAFTLIGLAGYRTSL
                     PTSLMILLCTMAGGAVLVAGGKFQSEQRFGISLALNQSPNLILLLSAGWVLALGSRKA
                     ETPLAVWTAGFLVAAAAGWWLLFRERHTKPERSVDFPWSEALAIAGLAAAGLLLIQLE
                     RLLLPHLLPLEDLATYGVLAAIAGSLFRVLQMGVGYSLLPRLRAAPGVIERRRLLFKE
                     ARLVIAVAALGSLVIWVATPRIEAWFLGGKYHLSAALVLAAVVTGVAKVLNGFAQSAV
                     SAMADRRELALVSVLGWVSVGVAVLGAVAGARWGLPGVIYGVGLGWVMRASVGLLLAA
                     RHLRLPAAPQTVTP"
     gene            complement(4147..>4443)
                     /locus_tag="VF061_05330"
     CDS             complement(4147..>4443)
                     /locus_tag="VF061_05330"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024914.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX6668955.1"
                     /translation="LNTPMKIYSYLDSGSAVLATRLRTHTQVLDDGIAYLVDPEPAAL
                     GRGLAELMADPELRARLASSAKAYVQREHTPEAARRKLEAFYTTMESRVRRMQA"
BASE COUNT          695 a         1627 c         1602 g          519 t
ORIGIN      
        1 tgatgatgtt ggcgaaggcg cgccgcagcg ggtcgtagtg tcccgagagc accggcgtcg
       61 cgcgatcgag ggtcagcttc gcggtcatgg ggggcggcac cgaggtgcgc gccagctcct
      121 ccagcagctc gcagagatcc accggcgcgg ccggcccttc cggcagccgc ccgaactcgg
      181 tgaactcgcg cgccaggagc tccaggcgct cggtctccgc ggtgagcacg tcgaccgcct
      241 cccgggtgga cggcgagggc gaccgcgcca gctgcgcgac cgccaggcgg atgggggtga
      301 gcgggttgcg catctcgtgg gcgacgcgtc gcgcggtctc ccggaaggcg cgcagtcgct
      361 ccgcctcgat cgcttccgcc cggccccgct ccaatgcctc cgccatctcg cgcagcgccg
      421 tgcgcaacgc cgcgaactcc ggcgccccgc gccgcggttt gtccgccggc agtggctcca
      481 tccggcggat gtggccggtc cagccgatca attcctcgat cggccggctc agctgccgcg
      541 acaggtgtcc ccccagacgc accgaggcgt agagcgccgc ggcgcccagc aggaagacgg
      601 cgatacccag ccccgcgtag tagtagcgat tgtaggtctc cacccgctgg aaccgtccga
      661 tggcgctgtt gagcgccgcc gcgtgggccg cgagcgcgtc gcgctccgcc cgcgagaggt
      721 ccgtcgtgtc gacggtgcgc aggagtgtgc gccccgtgcc cccgacttct tccagcgcat
      781 cgcgcggtcc cgcggccggc ctcgcggacc ggagcgtgag gccccagccc acgatcgccg
      841 cggcggtggg aatcgcgccg agacagatca ggatgaggag tatgcgctgg tggaaggaga
      901 gccgcatcgg ctcaaaagat aagccgcgat ccgggcgagg gcccacccga gcgcgatccc
      961 gcctcccgct cccagccatt cggaccagtg caccgcctcg aatcccgaga ccgccgggag
     1021 cagacccagc cccgcgatca cgacaccgcc gagggcgccg aaggcgccga gcggacgcgc
     1081 cacgaatccg gcccagtacg ctgccggcag gatcagcatg cccagccaca gcgctgcggt
     1141 catgcgcagc cgcactcccg gctcgatgcc gggggagaag agaagtgtcc agccgtagga
     1201 ggggctcagg gcgagctcga ccgagcgacg cccgctctcg tgcgccgcgg cgagccggag
     1261 ccggcggcca tccacctgcg cgaccagctc gaccggctgc cccgcgcggg aggggaaggc
     1321 gcgggagagc cgcaccaccg gcgcgaacat tcggatcgcc tgggccgccg tgggcgcctg
     1381 gaactcggcg ctgcggccgt gctgagccag gaccacggcc gacgccgtcg gcccgcggac
     1441 caggtggatc accttccgtc ccccggaggg ctcgccggcc gcggccaccg tctcgagcgc
     1501 caccgcgccg cgatgaagct cccggctcac cgtggttccg tgggggacgt cgcggtcgca
     1561 cgcaagcgcc accccgttca gcgtcatggc ccgtgccgtg ccggcgaaga cctccgaggt
     1621 cggaaagctc ggggtgcagt agttccgcag ccgacccggc ggcgcccatg ggcgcaggga
     1681 cagggccgtt aaggcgagga tgcccagcca ggccgcggcg gcggtgaggg agagccgacg
     1741 cgcgagcgcc ggcccgggcg cgagcagccg ctccagacgc atggcgatcg ccgcggccgc
     1801 cgcgccgccg gtggtattgg tgagcacatc gctgagcgag gcgtcgcgtc cggtgagcgg
     1861 aaagtactgc gccgtttcca cgcccagcga cagcagggcg cagaccgcgg ccacccggcc
     1921 ccagggccag ccgagcagcg cgagccccgc ggccatgggc atgaagagaa ggaggttgag
     1981 cacgacgtcg gtcccgcccg cctcgccgca gaccaggcag agcaggggcg tgaggtcggc
     2041 gacctcggcc tgctggggat tgggggagag ggtgagcccg aggatcgcga gcagtccgac
     2101 gccggcgagc agtgccgcga gcccccgcac ggtcgtcatg gggctcagga cgccaggcgc
     2161 gcccgcacga tcagcttgta gcccggctgg agccagagga gggtgtccag cttcgccatg
     2221 ccccagagga aggggtagag cgccgagagg agcaggaact gcttccggcg cttcctgacc
     2281 tcggcgccgg tgaccaccgt gcccttggag gagccgcgcg cctcacccgc gccccgctgc
     2341 atcgcgaggt acaatccgtt gagccccgtg tccaccagct cggagaacgc cttcgagtac
     2401 gtcaccgccc gctccacctc gaatcgcggg cccagcagcc gccggatccc ttcgaggctg
     2461 tagcccgggc gcaggtggcc gtgccattcg tcggtgagcc cgatggcgtg gcggaagcgg
     2521 ttcaccagcg agcgcggctt gaggtggggc acgttgatga tcacgcgccc cccgggcttg
     2581 aggatccgcg cgagctcgcc ggcgaaggcg ccgtcgtcgg gaatgtgctc caggtagtcc
     2641 accaccacga cctggtcgaa ggtgcggtcg gggaagggcg agcgggcgcc gtcgagccgg
     2701 tgcacgtcgt cgcccaccag ctcccggatc gacgcgaccg tgtgctcatc gagatcggcg
     2761 ctggcccact ggccgccccg ccgccggagc agcaggctga tcaccccgtt gtcggcgccg
     2821 atgtccaggc agcggcgacc cacggggtcg tccatcaagt cggtgatccg gcggtacttc
     2881 tcctgcttga ggaccgattt gcggaacagg gacagcgccc aatccgcgct cacggcgtca
     2941 ccgtctgggg cgccgccggc agccgcaggt gtcgcgcggc caggaggagg ccgaccgagg
     3001 cccgcatcac ccatccgagc ccgaccccgt agatgacccc ggggagcccc cagcgcgcgc
     3061 cggccacggc gcccagtacc gcaaccccga ccgacaccca gccgagcacg ctgaccaggg
     3121 ccagctcacg gcgatccgcc atggccgata ccgcggactg ggcgaacccg ttcaggacct
     3181 tggcgacacc ggtcacgacc gccgcgagca cgagcgccgc cgagaggtgg tacttcccgc
     3241 ccaggaacca ggcctcgatc cgcggcgtag ccacccagat caccagggag ccgagggccg
     3301 cgaccgcgat caccagtcgc gcctccttga acaggaggcg ccgccgctcg atgaccccgg
     3361 gggccgcccg aaggcggggc agcagggagt agcccacacc catctggagg acgcggaaca
     3421 gggagccggc gatggcggcc agcacgccgt aggtggcgag gtcctcgagc ggcaacaggt
     3481 ggggaagcag cagccgctcg agctggatca ggagcagccc cgcggcggcc agtccggcga
     3541 tcgccagcgc ctcgctccag gggaagtcca ccgagcgctc gggcttggtg tggcgctcgc
     3601 ggaacagcag ccaccagccg gcggccgcgg caaccaggaa ccctgcggtc cacaccgcca
     3661 gcggcgtctc cgccttccgt gagcccaggg ccagcaccca gccggcggac agcagcagga
     3721 tgagattggg gctctggttc agcgcgaggg agatcccgaa tcgctgctcg ctctggaact
     3781 tgccgcccgc caccagcacc gccccgccgg ccatggtgca gaggaggatc atgagggaag
     3841 tggggagcga ggtccggtac cccgccaggc cgatgagggt gaaggcgagc gcgaccggta
     3901 ccagcgaatg cagcagccgc cgcaggagcc gcggccccgc ctccacccgg cggcggttga
     3961 ccacgccgtc cacgccggcc gccgccagcg gataccccac gttcaccagc gcgaccacga
     4021 gggtgaggat cgcgtactcc tcggtgggca gcgcgcgcgc cagcaccagg ttcgcgaccg
     4081 cgaatcccaa tcccgacagt ccgagcaccg cgacgctgcg gagcgtggcc gagcgccaca
     4141 gccgcctcac gcctgcatcc gccggactcg ggactccatg gtggtgtaga acgcttccag
     4201 cttgcgccgc gcggcctccg gcgtgtgctc gcgctgcacg taggccttcg cgctgctcgc
     4261 caggcgggcg cgcagttccg gatccgccat cagctcggcc agcccgcggc cgagggccgc
     4321 cggctccgga tccaccaggt aggcgatgcc gtcatcgagc acctgggtat gggtgcgaag
     4381 ccgggtcgcc agcaccgccg atcccgagtc gaggtaggaa tagatcttca tcggggtgtt
     4441 gag
//
LOCUS       DASUYN010000270         2591 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_969731, whole genome shotgun sequence.
ACCESSION   DASUYN010000270 DASUYN010000000
VERSION     DASUYN010000270.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2591)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2591)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2591
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_969731"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..385)
                     /locus_tag="VF061_05335"
     CDS             complement(<1..385)
                     /locus_tag="VF061_05335"
                     /inference="COORDINATES: protein motif:HMM:NF016176.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HEX6668956.1"
                     /translation="MTALARAALCAVVLSLGARAAVAQGALPAGTVREGTLSFDGRAT
                     VGNFTGTTTAVTGEMSGGDSLPAVRGCVEAPVRTLKTGNGRRDRDLNRSMESDKYPTI
                     RFELTGVEPLAPAGDSLSVRLFGRFI"
     gene            complement(382..1224)
                     /locus_tag="VF061_05340"
     CDS             complement(382..1224)
                     /locus_tag="VF061_05340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668957.1"
                     /translation="MRHILTILALAAGWPAAAAAQRACFPGPESNEARTLAIFGVPLA
                     FSRGNAPTLFSGFQAGLELASLPEVDDAIATPTICEPGKGPENTDLLFALPRPRIGMP
                     LPFGLALQLSWVPPVRVRGVKANLFGVSVEKAFGRLDGLVGAIRAHATFGSVRAPVTC
                     DDTALEDAESECFRGRRSDDRLRPNIMGIDLALGGPLLEGRLRPYGGVGYNRLQPRFQ
                     VNFIDQFGQLDDRRVEVDLNRLVLFGGATWQATERVGITTELYGSPADAMTARVLVRT
                     AVWP"
     gene            complement(1224..1892)
                     /locus_tag="VF061_05345"
     CDS             complement(1224..1892)
                     /locus_tag="VF061_05345"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HEX6668958.1"
                     /translation="MLAGATLAGCGDDSSDEGTDGPGTATLSAARAAPSGDAQVGTAG
                     EDLAQPLRIVVRRGNDPDAGAVVTWSAPGTGASMTPAVDTTGADGISTSTWHLATEPG
                     IQRAEAAVPGAAGSPIPFTATGAAPDGGANEVQIRLLSSGGNRFEPANVAVPAGTKVT
                     WTWVGGFHDLNSTGASTFPGSGEATLPPHSYSFTFDSPGTYLYFCSVHGDPTSGMRGT
                     IVVQ"
     gene            complement(2229..>2591)
                     /locus_tag="VF061_05350"
     CDS             complement(2229..>2591)
                     /locus_tag="VF061_05350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HEX6668959.1"
                     /translation="RDTSGSDGVGGKVNVRFRRKDGKEVGQMDFETITLAPNREVRWR
                     FVAGPPEWIGTDATFQLAQDGDTTVLLFGHRNWREAVEFTAHCSTKWAVFLLSLKDLV
                     ETGKGRPAPDDVKIDNWN"
BASE COUNT          377 a          931 c          892 g          391 t
ORIGIN      
        1 tgatgaaccg tccgaagagc cgcaccgaca gcgagtcgcc ggccggcgcg agcggttcca
       61 ccccggtcag ctcgaaccga atggtggggt acttgtcgga ctccatcgac cggttcaggt
      121 cccggtcccg ccggccgttg ccggtcttga gggtgcggac cggcgcttct acacagccgc
      181 gtaccgccgg caggctgtcg ccgccactca tctctccggt gacggcggtc gtggtgccgg
      241 tgaagttccc cacggtggcc cggccgtcga agctcagggt cccctcacgg accgtgccgg
      301 cagggagggc gccttgcgcc accgccgcgc gcgcgcccag ggagagcacc acggcgcaga
      361 gcgccgcgcg agcgagggcg gtcatggcca caccgccgtc cgcaccagca ccctcgccgt
      421 catcgcgtcc gcgggtgacc cgtacagctc ggtggtgata cccacccgct cggtagcctg
      481 ccaggttgcc ccgccgaaca gcaccagccg gttcaggtcc acctcgaccc gccggtcgtc
      541 cagctggccg aactggtcga tgaagttgac ctgaaaccgg ggctggagcc ggttgtagcc
      601 caccccaccg tagggacgga gccggccttc gagcagcggg ccgcccaacg cgaggtcgat
      661 gcccatgatg ttggggcgca agcggtcatc ggagcggcgc ccgcgaaagc actcgctctc
      721 ggcatcctcg agcgcggtgt cgtcgcaggt gaccggggcg cgcaccgagc cgaacgtcgc
      781 gtgcgcccgg atcgccccaa ccaggccgtc cagccgcccg aaggccttct ccacggagac
      841 cccgaacagg ttggccttga cgccgcggac acgcaccggc ggcacccagc tcagttgcag
      901 tgcgagcccg aacggcagcg gcatcccgat ccgggggcgc ggcagtgcga acagcagatc
      961 ggtgttctcg ggccccttgc cgggctcgca gatcgtcggg gtcgcaatgg cgtcgtccac
     1021 ctcgggcagg ctggcgagtt cgagcccggc ctggaacccg gaaaacaggg tgggcgcatt
     1081 gccgcggctg aaggcgaggg ggaccccgaa gatcgccagg gtccgtgcct cgttcgactc
     1141 ggggccgggg aagcaagcgc gctgcgcggc ggccgcggcg ggccatcccg ccgcgagcgc
     1201 caggatcgtg aggatgtgcc gcatcactgg accacgatcg tgccgcgcat cccgctggtc
     1261 gggtcgccat gcacgctgca gaagtacagg taggtccccg ggctgtcgaa cgtgaacgag
     1321 tagctgtggg gcgggagcgt cgcctccccg ctgccgggga acgtggacgc accggtcgag
     1381 ttcaggtcgt ggaatccgcc cacccaggtc caggtgacct tggtccccgc gggcaccgcg
     1441 acgttggcgg gctcgaaccg attccccccg ctgctgagga ggcggatctg gacctcgttc
     1501 gctcccccgt ccggagccgc accggtcgcg gtgaatggaa tcggcgagcc cgcggcgccg
     1561 ggcaccgcgg cctcggctcg ctggatccct ggctcggtgg ccaggtgcca ggtgctggtc
     1621 gagatgccgt ccgcgcccgt ggtgtcgacc gctggtgtca tggaggcacc agttcccggc
     1681 gcgctccagg tcaccaccgc gccggcatcc ggatcgttgc cccggcgcac cacgattcgc
     1741 agaggctgag ccaggtcctc gccggcggtg ccgacctggg cgtcgccgct cggcgccgcg
     1801 cgcgccgcgg acagggtcgc cgtcccgggc ccgtccgtcc cttcgtcgct ggagtcgtct
     1861 ccgcagccgg ccagcgtggc cccggccagc actaccgcgg tccatcgaat cgttctcgct
     1921 cctgtcccca tcctgggcct tcctctcctg aatgccgttg tcgcccgagt ccgccccgcc
     1981 aagtccggaa caacatcgcg gtgcgggaca gggtccgata tcggccggcg aggaaacgag
     2041 gggaaagtct ttggagacca gcgctgtagg agagggacct acaagggcac cgacggagat
     2101 cggcaaccgg gggcggggaa ctgttcgaca ccgccggcac gagtcacgca cgaccgtgcc
     2161 ggcagcggct tcgtggagga tcgcgacgat gcagcttgca tccgatgctc gccgctttct
     2221 ggcagcacct agttccagtt gtcgatcttc acgtcatcgg gcgcgggccg gccctttccg
     2281 gtctccacca ggtccttgag actgaggagg aacaccgccc acttggtgct gcagtgcgcc
     2341 gtgaactcga cggcctcccg ccagttgcgg tgtccgaaga gcaggacggt cgtgtcgccg
     2401 tcctgggcca gctggaaagt cgcatcggtc ccgatccatt ccggcggtcc cgcgacaaag
     2461 cgccaccgga cttcccggtt gggcgccagc gtgatcgtct cgaagtccat ctggccgact
     2521 tccttcccgt ccttgcgccg gaatcgaacg ttgaccttcc cgccgactcc gtccgatccg
     2581 ctcgtgtccc t
//
LOCUS       DASUYN010000271        10563 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_747415, whole genome shotgun sequence.
ACCESSION   DASUYN010000271 DASUYN010000000
VERSION     DASUYN010000271.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10563)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10563)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10563
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_747415"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..449
                     /locus_tag="VF061_05355"
     CDS             <1..449
                     /locus_tag="VF061_05355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668960.1"
                     /translation="TLGPTPGTNTLEARAGSLAGSPVIFTAEGTQAEPEPEVDRLVFL
                     TPPPDAEVSERFPVEVALVDADGDVVPLSGIVIYVALFEEDEDSPSNALLAGERFEST
                     EDGVAEFDLAVEREGRYRLRALTDDLPELGPHGPEPYLFSEVFEVD"
     gene            complement(632..1156)
                     /locus_tag="VF061_05360"
     CDS             complement(632..1156)
                     /locus_tag="VF061_05360"
                     /inference="COORDINATES: protein motif:HMM:NF018663.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX6668961.1"
                     /translation="MPTPTQRISTMLWFDDQAEEAVAFYTAIFKNSKVLSTTRYTKEA
                     QQAAGRPEGSVMTVDFVLDGQKFTALNGGPQFKFTEAISLVVHCRNQEEVDHYWDRLS
                     AGGDPRSQQCGWLKDRFGVSWQVVPDGLTDLLTAQDPEKSRRAMAAVLNMKKLDLAEI
                     RRAAGEGAMTGARS"
     gene            1417..2436
                     /locus_tag="VF061_05365"
     CDS             1417..2436
                     /locus_tag="VF061_05365"
                     /inference="COORDINATES: protein motif:HMM:NF024676.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="WYL domain-containing protein"
                     /protein_id="HEX6668962.1"
                     /translation="MTFEQLIREVPAYGAEQKEESRRRTFERDKDELRKFGVPIETLP
                     ASDLEPGGYRLRVRDFYLPYLTVRAEGAGKSAPRKLDPYGYRSLPTLSFEPEELAAVA
                     DAAVRVRQLGDPLLAEHAESAMRKLACDLPVDAAGPPGGDVRLLRAKASPAADLLATL
                     DVALRSRKRVTFRYHTMGTDAVGERTVEPFGLFFLNQHWYLAARAPGEQVVKNFRLNR
                     IESLRVSMARPNSPDYEIPGGFDLRGHARSRQAWELGAGDAMVATVAFRARTGAAAAA
                     YRLGEAVEGYPDRRHFRVRRTDAFARWLLSFGGDLVPLAPSDLVHDYKGLVRETLHHH
                     APPPA"
     gene            2433..3380
                     /locus_tag="VF061_05370"
     CDS             2433..3380
                     /locus_tag="VF061_05370"
                     /inference="COORDINATES: protein motif:HMM:NF024676.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WYL domain-containing protein"
                     /protein_id="HEX6668963.1"
                     /translation="MNAVEQLRRILQLIPRLADGEPHSLDQVARLAGVERSVILRDIE
                     SISERFEVPGGFVEGLQIFIDADDISIVPNHFLRPMRLTRSELLALELGLAMLRGERP
                     PEEHRAIEAAAERLRQAVAKLPQEEIADDFRVASLSPAGDLAHLRRLRDAFRARRKVR
                     LTYRKAGEEASSRRIICPYGIVFAGGMWYAVAHCETSDGIRIFRLDRVELVETLSAKF
                     DSPRGFSLDALLREGKAFQASEAGTLRLRYSPRIARWIAEREGKTLAHDGSLTMDHPL
                     ADTDWAVRHVLQYGPDVEILAPPSVRAAVVQRLRRMASE"
     gene            3466..4116
                     /locus_tag="VF061_05375"
     CDS             3466..4116
                     /locus_tag="VF061_05375"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX6668964.1"
                     /translation="MVKPYSSTKRSRRPPPPDQETRDRILDAADRVFTRRGTASGRTQ
                     EIADEARVNKALVHYYFGTKAALADAIFARALGMLVPRIFGILADPSRGIEEKVPAIV
                     KEQIDFHSARPYIAGYMVAELHADPERIARMMKAHGRIPLDVLRRQLHEGARAGRLRR
                     ISPEQFVANMMGLLLFPFAIRAALCEMLEFDSARWQAFLDERRRILPDFVMAGLRP"
     gene            4113..5429
                     /locus_tag="VF061_05380"
     CDS             4113..5429
                     /locus_tag="VF061_05380"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEX6668965.1"
                     /translation="MIRALAFGLAALVVPGVAQAQDTLGLPAVQEAALRADPRGRQRE
                     LLRAATDLRQAVIGADRLPRVSVSGYASHQSDVTRPSLGVPGLEIPELPKDRWQTTLD
                     LEQPLYDGGDVGRRRAVEAARHAESEAAVDVALYELRSEVNAAFYSAFLLDRRAREFE
                     ALVTDLEARLAAVRARVDAGAALGRDAAEVEAELVRAQLRRDEARASRRAALAILSDL
                     THAPVDTGSVLLLPEGQPELSEPTEPAALAALRRRPEFEQLRRSRLRLEREMEATSVE
                     NRPRLFAFGQAGVGLPGLDQFRRSSDAFWQAGVRLEWRPWTWRSAGRRAAALRLQQEV
                     LETEESALGRRLARAVATDLEDIARLKAALGDDQRIVELRTEVERQARAQYDEGAITT
                     PEYVEARTDVLEARLEQERHRVELAQARSRYLTTLGIIPTGASDRP"
     gene            5435..6337
                     /locus_tag="VF061_05385"
     CDS             5435..6337
                     /locus_tag="VF061_05385"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HEX6668966.1"
                     /translation="MTRAWRRGIVGLAAAALAGCGNDEPDAYGNFEATEVTVAAEIGG
                     RLLAFALEEGDRVSRDRVVGVVDTVPLVLERDAVVARRAAAQARTREAGATLAALEVQ
                     RSIADRELARTERLLKQAAATAQQGDRAERDARVARDQLDGARAARAGARQEVAALDA
                     QIASIDDRLARSRIRSPLAGTVLARYVEPGEFVQPGQPLFKLASLDSLTFRAYVAQAQ
                     LTRLRLGQEVRVGVDRADSIVALPGRVTWIASSAEFTPTPIQTREERADQVYAVKVTV
                     ANAEGRLRIGMPGELILATGAGDE"
     gene            6330..7271
                     /locus_tag="VF061_05390"
     CDS             6330..7271
                     /locus_tag="VF061_05390"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX6668967.1"
                     /translation="MSDGLAVEVRGVGRRYGETAALADVSFEVGPGELYGVIGPDGAG
                     KTTLFRILVTLLLPDTGTARVLGRDVVEDLWNLRTRIGYMPGRFSLYPDLSVLENLTF
                     FASLFDTTVAEARATIAPIWVQLEPFAGRRAGALSGGMKQKLALCCALVHRPEILILD
                     EPTTGVDAVSRREFWDLLARLRAEGLPIVVSTPYMDEAVRCDRVSLMQGGRLLATDRP
                     AEIGRRYPRPLLGVRGPDVLGLLGALRRFPHAAAVWPFGESLHYTDARTGVAPEAIVG
                     ELRAHLEAAGLGGVSLAPIPASIEDSFMWHMAQERAA"
     gene            7268..8005
                     /locus_tag="VF061_05395"
     CDS             7268..8005
                     /locus_tag="VF061_05395"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX6668968.1"
                     /translation="MTARAIEAQDLTRRFGDFTAVDAITFHVEPGEVFGFLGANGAGK
                     TTAIRMLIGALAPSAGAATVAGYDIRTQAEQVRRRIGYMSQKFSLYEDLTVRENITLY
                     GGIYGVSSRDIVTRTGDILARIGLEHAGDELVREIPLGWKQQLAFSVALLHRPGIVFL
                     DEPTGGVDPITRRRFWELIYEAGAAGTSVLVTTHYLDEAEYCRRISIMVDGAIAAMGT
                     PSDVRRSVGAETLDEVFVKLTRPGAAA"
     gene            8002..9105
                     /locus_tag="VF061_05400"
     CDS             8002..9105
                     /locus_tag="VF061_05400"
                     /inference="COORDINATES: protein motif:HMM:NF024091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX6668969.1"
                     /translation="MRAFLGFVRKETLHLLRDRQTLAILLLFPVVQVLIFGFAVRTDV
                     QDITIAIVDPTPDVATLELRQRIGASDRFHIVSVSPSGRDLQRRFREGSIRQALVLPR
                     DVERRIGRGDSLPVQLLTDGSDPNTGGIMQGYAAAIVDRWYRDAVPAVGGLRIEPRTR
                     MRFNPTLESAHLFVPGLLAYVLTIMSAMMTAISITREKETGTMEMLLVSPIRPTAIVT
                     GKVMPYIALSFVSVLLVLAVARSVFGVPLRGSLTLLIAESGLYIVTALALGVVISTVV
                     PNQRTAMIAALAGLLLPTLVLSGFIFPIDSLPRPLQWLSYVVPARWFLTVVRGIMLKG
                     AGLETLWQETLVLLGMTLLLLARGSRGLAIRLG"
     gene            9109..10242
                     /locus_tag="VF061_05405"
     CDS             9109..10242
                     /locus_tag="VF061_05405"
                     /inference="COORDINATES: protein motif:HMM:NF024110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX6668970.1"
                     /translation="MRTVFFLVRKEFLQVFRDRTTVFQIFMIPVVQLLVLANAATFDV
                     TQVAMLVVDEDRTTVSGGLVQRLEAGGQFRVVRYEATDAGVDQALLDREVTAVLHIPR
                     RFEEDLVREGRAPVQLVLNSEEGATAGIVQSYATAILSSYARELDRTLPTLRRGGASA
                     ARVAPLDLRTRRWFNPDRNYKDWMVPALMVSLTTIIGLLLTAQNIVRENELGTLEQLN
                     VTPMTKLQFIAAKLIPFWLLTMVIFSIGLVIGRLVFAMPMRGNLLLVYLAATVYLIVV
                     LGLGLWISTVTRTQQQAMFVAFFVILIFLLMSGLFTPVDSMPRWAQWVAEANPVKHFV
                     AVMRAVLVRGAGLETVGMPILGLGVAGLGVLALAVARYRKSVA"
     gene            10303..>10563
                     /locus_tag="VF061_05410"
     CDS             10303..>10563
                     /locus_tag="VF061_05410"
                     /inference="COORDINATES: protein motif:HMM:NF024248.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX6668971.1"
                     /translation="MAHPAPLDVVRSADSAAALLDPTRQQLLAHLREPDSATGLARRL
                     KLPRQRINYHLKVLEEAGLVELVEERRRGNCLERVVRAAARAF"
BASE COUNT         1455 a         3742 c         3772 g         1594 t
ORIGIN      
        1 ggacgttggg gccgacccct ggaacgaaca ccttggaggc gcgcgcgggc tcactggccg
       61 ggagcccggt gatcttcact gcggaaggca cccaggcgga gccggagccc gaggtggacc
      121 gtctcgtctt cctcacccca ccgcccgacg cggaggtgag cgagcgcttc cccgtggagg
      181 tggcgctggt ggatgccgac ggcgacgtgg tgccgctgtc ggggatcgtc atctatgtcg
      241 cgctgttcga ggaggacgag gacagcccgt ccaacgcgct cctggccggc gagcggttcg
      301 agagcaccga ggatggcgtc gccgaattcg acctggccgt cgagcgggag gggcgctacc
      361 ggttgcgggc gctgaccgac gacctgcccg agctcggacc gcacggtcca gagccctacc
      421 tgttcagcga ggtcttcgag gtggattgag gcggctcacg agccgctgag cctccactgc
      481 gcgcgcaggc ggtactgttc ccgccgagga agccctgcgg cgcgcgatcg agctgctcgg
      541 ggcgatccgg gacgacctgc cggcggacga tgcagcccgt cgcgccgccg tcacccgggc
      601 gtcgcgccgg ctgcaccgac ggcgatcccg ctcagctcct ggcgccggtc atcgcacctt
      661 ccccggcggc ccgccggatc tcggccaggt cgagcttctt catgttcagg accgccgcca
      721 tcgccctgcg actcttctcg ggatcctgag cggtgaggag gtccgtgaga ccgtccggga
      781 cgacctgcca ggagacgccg aagcggtcct tgagccagcc gcactgctgg gaccggggat
      841 cgccgccggc ggaaagccgg tcccagtagt ggtccacctc ctcctgattc cggcagtgca
      901 ccacgagcga gatggcttcg gtgaacttga actggggacc gccattgagc gcggtgaact
      961 tctgaccatc gagcacgaaa tcgaccgtca tcaccgagcc ctccggtcgc ccggcggcct
     1021 gctgcgcctc cttggtgtat cgggtggtcg acaagacctt ggagttcttg aagatggcgg
     1081 tgtagaaggc gacggcctcc tcggcctggt cgtcgaacca cagcatggtc gagatgcgct
     1141 gggtcggtgt cggcatgttg ttgctccttg agcagttacg gtgcattcag ggaaccggcg
     1201 accgcggtcg cccggatact tcattaagta gtcggagccg ggctggcaag ctcgacatcg
     1261 tgccatcgct cccgtcacat ggcagccgta ttgttatgga catctcatga tcactgcctg
     1321 ggacggcgcc ctcggttacg gggtcgcgcc ctgaaatccg ccaagatcca acgctggatc
     1381 gacctgctcg ccgctctcct gcggcaccac tatccggtga ccttcgagca gctcatccgc
     1441 gaggtccccg cctacggcgc cgagcagaag gaggagagcc ggcgccgcac cttcgagcgc
     1501 gacaaggacg agctgcgcaa gttcggcgtc ccgatcgaga cgcttccggc ctcggacctg
     1561 gagcccgggg gctaccggct ccgcgtgcgc gacttctacc tcccctatct caccgtgagg
     1621 gcggagggcg ccggcaagtc ggcgccgaga aagctcgacc cctacggcta ccgctcgctc
     1681 cccacgttga gcttcgagcc ggaggagctg gccgcggtgg cggacgccgc cgtccgggtg
     1741 cgccagctgg gcgaccccct gctcgccgag cacgcggagt ccgccatgcg gaagctggcc
     1801 tgtgacctcc cggtggacgc ggccggtccg cccggcggcg acgtgcgcct cctccgggcg
     1861 aaggcctccc ccgccgccga cctgctcgcc accctggacg tcgcgctccg gagccggaag
     1921 cgcgtcacct tccgctatca caccatgggc accgatgccg tcggcgagcg cacggtcgag
     1981 ccgttcgggc tcttcttcct caatcagcac tggtatctcg cggcccgcgc gccgggcgag
     2041 caggtggtca agaacttccg cctcaaccgg atcgagtcgc tccgggtgag catggcgcgc
     2101 cccaacagcc cggactacga gatccccggg ggcttcgacc tccgcggcca cgcgcgctcc
     2161 cggcaggcat gggagctggg cgcgggcgac gcgatggtgg cgaccgtggc cttccgcgcc
     2221 cggaccggcg cggccgccgc cgcgtaccgc ctgggcgaag ccgtcgaggg ctatcccgac
     2281 cgccgccact tccgcgtccg gcggaccgac gcgttcgccc gctggctcct ctccttcggc
     2341 ggggacctgg tgccgctcgc gccgagcgac ctggtgcacg actacaaggg cctcgtccgc
     2401 gagacgctgc accaccacgc cccgccgccg gcatgaacgc cgtcgagcag ctccgccgca
     2461 tcctgcagct catcccccgg ctcgccgacg gggagccgca ctcgctcgat caggtcgcgc
     2521 ggctggcagg ggtcgagcgc tcggtcatcc tccgggacat cgagtccatc tccgagcgct
     2581 tcgaggtacc gggcggcttc gtcgaagggc tgcagatctt catcgacgcg gacgacatct
     2641 cgatcgtccc gaaccacttc ctccgcccga tgcggctcac ccggagcgag ctcctcgcgc
     2701 tggagctggg cctcgcgatg ctccggggcg agcgtccgcc ggaggagcac cgcgcgatcg
     2761 aggccgccgc ggagcgcctc cgccaggcgg tcgccaagct gccgcaggag gagatcgccg
     2821 acgacttccg ggtcgcgtcg ctctcgccgg ccggcgatct ggcgcatctg cgccgcctgc
     2881 gcgacgcctt ccgcgcgcgc cgcaaggtgc ggctcaccta ccgcaaggcg ggagaggagg
     2941 cctcgtcccg gaggatcatc tgcccctacg gcatcgtctt cgccggcggg atgtggtacg
     3001 cggtcgccca ctgcgagacc agcgacggga tccggatctt ccggctggac cgggtggagc
     3061 tggtcgagac cctgtccgcg aagttcgact cgccgcgggg cttctcgctc gacgcgctgc
     3121 tgcgggaggg gaaggcgttc caggcgtcgg aggcggggac gctccggctc cgctactcgc
     3181 cccgcatcgc ccgctggatc gcggagcgcg agggcaagac gctggcgcac gacggctcgc
     3241 tcaccatgga ccatcccctg gccgacaccg actgggccgt ccggcacgtg ctccagtacg
     3301 ggcccgacgt cgagatcctg gcgccgccgt cggtgcgcgc cgccgtcgtg caacgcctcc
     3361 gtcggatggc gagcgagtga gcaccgccga gcgcgagcga tccagccggg ggtgagggcc
     3421 ggacacccct cttgacagac cggcaagcgc cctcatatta accgtatggt taaaccatat
     3481 agttcaacca aacggtcaag acggccgcct ccgcccgacc aggagacccg ggaccgcatc
     3541 ctcgacgccg ccgaccgggt gttcacccgg cggggcaccg ccagcggccg gacccaggaa
     3601 atcgccgacg aggcccgagt caacaaggcc ctggtgcact actacttcgg caccaaggcc
     3661 gcgctcgccg acgcgatctt cgcccgggcc ctgggtatgc tggtgccccg gatcttcggg
     3721 atcctggcgg accccagccg aggcatcgag gagaaagtgc ccgccatcgt caaggaacag
     3781 atcgacttcc actcggcccg cccctacatc gcgggctaca tggtggccga gctccacgcc
     3841 gaccccgagc gcatcgcccg catgatgaag gcgcacggcc ggattccgct cgacgtgctc
     3901 cggcggcagc tccacgaggg agccagggcg ggcaggctcc gccgcatcag ccccgagcag
     3961 ttcgtcgcca acatgatggg cctgctgctg ttccccttcg ccatccgggc ggcgctgtgc
     4021 gagatgctcg agttcgattc cgcccgctgg caggccttcc tggacgagcg ccggcgcatc
     4081 cttcccgact tcgtcatggc ggggctccgg ccatgatccg cgcgctcgca ttcggccttg
     4141 ccgcgctcgt ggtccccggt gtggcccagg cccaggacac gctcggcctc cccgcggtgc
     4201 aggaggcggc gctccgcgcc gatccccggg ggcggcaacg ggagctactc cgcgccgcca
     4261 ccgacctgcg ccaggcggtg atcggcgcgg accggctgcc gcgggtctcc gtcagcgggt
     4321 atgcctcgca ccagagcgac gtcacccggc ccagcctcgg cgttcccggt cttgagattc
     4381 ccgagctgcc gaaggaccgc tggcagacga ccctcgacct ggagcagccg ctctacgacg
     4441 gcggagacgt ggggcgacgg cgcgcggtcg aggcggcgcg ccacgccgag tcggaggccg
     4501 cggtggacgt ggcgctctac gagctccgct cggaggtgaa cgccgccttc tactcggcgt
     4561 tcctgctcga ccggcgcgcg cgcgagttcg aggcgctggt caccgatctc gaggcccggc
     4621 tcgcggcggt gcgcgcccgg gtagacgccg gcgccgcact cggccgcgac gcggccgagg
     4681 tcgaggccga gctggtgcgg gctcagctgc ggcgggacga ggcgcgggcc agccggcggg
     4741 ccgcgctggc gatcctctcc gatctgaccc acgccccggt ggacacgggc tccgtgctgc
     4801 ttctgccgga gggacagccg gagctttccg agccgacgga gcccgcggcc ctcgccgctc
     4861 tccgccggcg cccggagttc gagcagcttc gccgctcgcg ccttcggctc gagcgggaga
     4921 tggaggccac gagcgtggag aaccggcccc ggctgttcgc gttcggccag gccggggtcg
     4981 gcctgccggg gctggaccag ttccgccgtt cgtcggatgc gttctggcag gcgggcgtcc
     5041 ggctcgagtg gcgcccgtgg acctggcgct ccgcgggccg gcgcgccgcg gcgctccggc
     5101 tgcaacagga ggtgctggaa accgaggagt cggcgctggg ccgccggctc gcgcgcgccg
     5161 tcgcgaccga cctggaggac atcgcccggc tcaaggcggc gctgggcgac gaccagcgca
     5221 tcgtggagct ccgcaccgaa gtcgagcggc aggcccgggc ccagtacgac gagggcgcca
     5281 tcaccacgcc ggagtacgtc gaggcgcgca ccgacgtgct cgaggcccgg ctggagcagg
     5341 agcgccatcg ggtcgagctg gcgcaggcgc ggtcgcggta tctcacgacc ctgggcatca
     5401 tccccaccgg agcgagcgac agaccatgag ccggatgacg agagcttgga ggaggggcat
     5461 tgtcggcctg gccgccgcgg ccctcgccgg gtgcggcaac gacgagcccg acgcctacgg
     5521 caacttcgag gcgaccgagg tgacggtggc ggcggagatc ggcggccggc tcctcgcctt
     5581 cgccctggag gagggcgacc gcgtgagtcg cgaccgcgtg gtcggcgtgg tggacacggt
     5641 gccgctcgtg ctcgagcgcg acgcggtcgt cgcccggcgc gcggcggccc aggcgcggac
     5701 ccgggaggcc ggcgccaccc tcgcggcgct ggaagtgcag cggtccatcg ccgaccgcga
     5761 gctcgcccgc accgagcggc tgctcaagca ggccgcggcc acggcgcagc agggcgaccg
     5821 cgcggagcgg gacgcgcggg tggcgcggga ccagctggac ggggcgcgag cggcccgcgc
     5881 cggcgcgcgt caggaggtcg cggcgctcga cgcccagatc gcgtccatcg acgaccggct
     5941 ggcgcggagc cggatccgga gtccgctcgc cggcacggtg ctggcccgct acgtggagcc
     6001 gggcgagttc gtgcagccgg gccagcccct cttcaagctg gcctcgctgg actcgctcac
     6061 cttccgcgcc tatgtcgccc aggcgcagct cacccgactc cgcctggggc aggaggtccg
     6121 ggtcggggtg gaccgggccg actcgatcgt cgcgctcccg ggccgggtca cctggatcgc
     6181 gtcctcggcg gagtttaccc cgacgccgat ccagacgagg gaggagcggg ccgaccaggt
     6241 gtacgctgtg aaggtgacgg tggccaacgc cgagggccgg ctccgcatcg gcatgcccgg
     6301 cgagctgatc ctggcgaccg gggccgggga tgagtgacgg gctcgcggtg gaggtccgcg
     6361 gcgtcggccg ccgctacggg gagacggcgg cgctggcgga cgtgtcgttc gaggtcggcc
     6421 cgggcgagct ctacggcgtg atcgggcccg atggtgcggg caagacgacg ctgttccgga
     6481 tcctggtcac cctcctgctg cccgacaccg gcaccgcgcg ggtcctcggc cgcgacgtcg
     6541 tcgaggacct gtggaacctg cggacgcgca tcgggtacat gcccggccgc ttctcgctct
     6601 atcccgatct cagcgtgctg gagaacctca ccttcttcgc gtcgctgttc gacaccaccg
     6661 tggcggaggc gcgggcgacg atcgcgccga tctgggtgca gctggagccg ttcgccgggc
     6721 ggcgcgcggg cgcgctctcc ggcggcatga agcagaagct ggcgctctgc tgtgcgctgg
     6781 tccaccggcc cgagatcctc atcctggacg agcccaccac cggggtcgac gcggtgtcgc
     6841 gccgggaatt ctgggacctg ctggcgcggc tgcgcgccga gggactgccg atcgtggtct
     6901 cgacgccgta catggacgag gcggtccggt gcgaccgggt gagcctgatg cagggcggac
     6961 ggctgctcgc gaccgatcgg ccggccgaga tcggacgccg gtatccgcgg ccgctgctcg
     7021 gcgtgcgagg gccggacgtc ctggggctgc tgggcgccct gcggcggttt ccccacgcgg
     7081 ccgcggtgtg gccgttcggg gagtcgctgc actacaccga cgcgcggacg ggcgtcgcgc
     7141 cggaggcgat cgtgggggag ctgcgggcgc atttggaggc cgccggactc ggcggcgtgt
     7201 cgctcgcacc gatcccggcg agcatcgagg attccttcat gtggcacatg gcgcaggagc
     7261 gtgcggcgtg accgcccgcg ccatcgaggc ccaggacctc acccgccgct tcggcgactt
     7321 caccgcggtg gacgcgatca cctttcacgt cgagcccggc gaggtgttcg gcttcctcgg
     7381 cgccaacggg gcggggaaga cgaccgccat ccggatgctg atcggcgcgc tggcgccctc
     7441 cgcgggcgcc gcgacggtag cggggtacga catcaggacc caggcggagc aggtgcgccg
     7501 gcgcatcggg tacatgagcc agaagttctc gctctacgag gacctcaccg tccgggagaa
     7561 catcaccctc tacggcggca tctacggcgt cagcagccgc gacatcgtca cccgaaccgg
     7621 cgacatcctg gcccggatcg gcctggagca cgccggcgac gagctggtgc gggagatccc
     7681 cctgggctgg aagcagcagc tcgccttctc ggtcgcgctg ctccaccgcc ccggcatcgt
     7741 cttcctggac gagcccaccg gcggcgtgga cccgatcacc cggcggcgct tctgggagct
     7801 gatctacgag gcgggagcgg ccggcaccag cgtcctggtc accacccact atctcgacga
     7861 ggcggaatac tgccgccgga tctcgatcat ggtggatggg gcgatcgccg ccatgggcac
     7921 cccgtccgac gtgcgccgca gcgtgggcgc ggagacgctg gacgaggtgt tcgtcaagct
     7981 gacccgcccg ggggcagccg cgtgagggcg tttctcggct tcgtgcggaa ggagaccctc
     8041 cacctgctgc gcgaccgcca gacgctggcc atcctgctcc tcttcccggt ggtgcaggtg
     8101 ctgatcttcg gcttcgcggt gcgcaccgac gtgcaggaca tcaccatcgc gatcgtggac
     8161 ccgacgcccg atgtcgccac tctggagctg cggcagcgga tcggcgcttc cgaccgcttc
     8221 catatcgtga gcgtctcgcc gagcggccgc gatctccagc gccgattccg cgagggctcc
     8281 atccgccagg cgctggtgct gccccgcgac gtggagcggc ggatcggccg gggagactct
     8341 ctgccggtgc agctcctgac cgacggcagc gatcccaaca ccggcggcat catgcagggc
     8401 tacgccgccg cgatcgtgga ccgctggtac cgcgacgcgg tgccggccgt cggcgggctc
     8461 cggatcgagc cccggacgcg catgcggttc aaccccacgc tggagagcgc ccatctcttc
     8521 gtgcccgggc tcctcgccta cgtgcttacc atcatgtcgg cgatgatgac cgccatctcg
     8581 atcactcggg agaaggagac cggcacgatg gagatgctgc tggtctcgcc catccgcccc
     8641 accgcgatcg tgaccggcaa ggtcatgccc tacatcgcgc tcagcttcgt cagcgtgctg
     8701 ctggtgctgg cggtcgcgcg aagcgtgttc ggagtgccgc tgcgggggag cctcacccta
     8761 ctgatcgccg aatcgggtct gtatatcgtc accgcgctcg cgctcggcgt cgtgatctcc
     8821 accgtggtgc cgaaccagcg gaccgccatg atcgccgcgc tggccgggct cctgctgccg
     8881 acgctcgtgc tgtcggggtt catcttcccg atcgactcgc ttccccggcc gctccagtgg
     8941 ctctcgtacg tggtgccggc gcgctggttc ctcaccgtcg tccgggggat catgctcaag
     9001 ggcgccgggc tggagacgct gtggcaggag acgctcgtcc tactggggat gacgctcctc
     9061 ctcctggcgc gcggctcccg cggccttgcc atccggctgg gctgagccgt gcgcaccgtc
     9121 ttcttcctgg tccgcaagga gttcctccag gtgttccggg accgcaccac cgtgttccag
     9181 atcttcatga tcccggtcgt gcagctcctg gtgctcgcga acgcggccac cttcgacgtg
     9241 acacaggtgg cgatgctggt ggtggacgag gaccggacca cagtctcggg gggattggtg
     9301 cagcggctgg aggcgggtgg gcagttccgg gtggtgcgct acgaggcgac cgatgcgggg
     9361 gtggaccaag cgcttctcga ccgcgaggtg acggcggtgc tgcacatccc ccgccggttc
     9421 gaggaggacc tggtccggga gggccgggcc ccggtgcagc tggtgctgaa ctcggaggag
     9481 ggcgccaccg ccgggatcgt gcagtcctac gccaccgcaa ttctctcctc ctatgcgagg
     9541 gagctggatc ggaccttgcc gaccctccgc cgtggaggcg cctcggcggc gcgggtggcg
     9601 ccgctcgacc tcaggacccg ccgctggttc aatccggacc ggaactacaa ggactggatg
     9661 gtgccggcac tgatggtatc gctcaccacg atcatcggcc tgttgctcac ggcccagaac
     9721 atcgtccgcg agaacgagct gggcacgctg gagcagctca acgtgacgcc catgaccaag
     9781 ctccagttca tcgcggccaa gctgatcccg ttctggctgc tgacgatggt gatcttctcg
     9841 atcggactcg tgatcgggag gctggtgttc gcgatgccga tgagggggaa cctgctgctg
     9901 gtctacctgg ccgccacggt ctacctgatc gtggtactgg gactggggct ctggatctcg
     9961 accgtcaccc gcacccagca gcaggcgatg ttcgtggcct tcttcgtgat cctgatcttc
    10021 ctcctgatga gcgggctgtt cacgccggtg gactcgatgc cgcggtgggc gcagtgggta
    10081 gccgaggcga atccggtgaa gcacttcgtg gcggtcatgc gcgccgtgct ggtgcggggt
    10141 gccgggctgg agaccgtggg gatgccgatt ctgggactgg gcgtggccgg cctcggcgtg
    10201 ctggcgcttg ccgtggcgcg gtatcggaag tcggtggcat aggcgcgacg gacagaatta
    10261 tacactattg acaaataaaa ctgtcggtaa cagattgggg ccatggctca cccggcccca
    10321 cttgatgtcg tccgctcggc tgactccgcg gccgccctcc tggatcccac ccggcagcag
    10381 ctcctcgccc atctgaggga gcccgactcc gccaccgggc tcgcccggcg gctcaagctc
    10441 cctcgccagc gcatcaacta tcacctcaag gtcctggaag aggccggtct ggtggagctg
    10501 gtcgaggagc ggcggagggg caactgcctg gagcgagtgg tgcgcgccgc cgcccgggcc
    10561 ttc
//
LOCUS       DASUYN010000272         4648 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_529137, whole genome shotgun sequence.
ACCESSION   DASUYN010000272 DASUYN010000000
VERSION     DASUYN010000272.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4648)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4648)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4648
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_529137"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..492)
                     /locus_tag="VF061_05415"
     CDS             complement(<1..492)
                     /locus_tag="VF061_05415"
                     /inference="COORDINATES: protein motif:HMM:NF024587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytidylate kinase-like family protein"
                     /protein_id="HEX6668972.1"
                     /translation="MLITISRQYGAGGSELAALVAGRLGWRVVDNELIERVAARAGLT
                     PEDVAQREERVSTFIERLARTVVAATPELVVPPEAGGTAPTLSEEDLVRITEHVVEEI
                     AAEGRVVLVGRAAPAVLAQERDAIHVKVVAPRDWRVQVIARRLGVSPEEAAALTDETD
                     RNRA"
     gene            complement(486..1718)
                     /locus_tag="VF061_05420"
     CDS             complement(486..1718)
                     /locus_tag="VF061_05420"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX6668973.1"
                     /translation="MPTPPSVFSALRHRDFRLFLGGQLVSQCGTWVQTVAQGWLVLQL
                     TDSAFAVGLVTALGSLPILLFTLYGGVVADRVDKRRFVILLQSGMLLEALALAVLTHQ
                     GWITVHLVMALASFYGLLSAFEVPTRQALVSEIVGKDDLMNAIALNSSAFNVARVIGP
                     SIAGALIATVGLAACFYLNAASYLAVLTGLLLMRVRRPATPSRTPALGALKEGFGYIF
                     GNSWPRALVTIVAGFTVFGASFLPMMPVYARDVLGLDADGYGAIVSAIGLGAASGAIG
                     MAAAGGRVRRGRVVILTFAVFGAVLACGGYVRGFWGALALFTVAGGLMAVNGIMANTM
                     LQLEAPDRLRGRVMGFYSFVVLGMAPFGALQAGWLSEHFGVRTAFALGGLACVLMAGL
                     VGYATRREGRKAGNLVRC"
     gene            1937..3226
                     /locus_tag="VF061_05425"
     CDS             1937..3226
                     /locus_tag="VF061_05425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEX6668974.1"
                     /translation="MRFTTYSKFHPELADAVNLQGLLDQLSDFLLQSGFAGGSPSFWH
                     DEGGEGERSLEALRQAILQALMESGQLTPEMLKALRGESSGDPERDQQVERELSELLD
                     RIVQRLMDEGYLNVGQAPQVPQGYQSMFGPGGQAHSAAQQVQFNLTEKGIDFLGYKTL
                     KGLLGSVGKSSFGAHDTPYLATGVEAEGVSKPYEFGDVLNLDVPATLTNAIAREGLGV
                     PLNIEYQDLMVSQSEYRSSAATVLMLDCSHSMILYGEDRFTPAKKVALALTHLIRTQF
                     PGDSLRVVLFHDSAEEIPLSALAQAQVGPYHTNTAEGLKLARRILLAQKKDMRQIIMI
                     TDGKPSALTMPDGRIYVNSMGLDPQILQATYREVANCRRSGIMINTFMLARDRSLVEF
                     VKQVASICKGKAYFTNTMTLGQFILMDFMKRKTRRVS"
     gene            3268..3678
                     /locus_tag="VF061_05430"
     CDS             3268..3678
                     /locus_tag="VF061_05430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668975.1"
                     /translation="MTAMAPFAALRATVPAWALALAALHGCGRGPATGSATAYTVPLS
                     AAEAPMVTVRQIVERDTLLGRRVRVGGVCAIAQVGRSAGVWLLQAGAWAIEVRGLVPR
                     SCYRDPVGTEALTIFAQVVEGTDSTERLLLRLPE"
     gene            complement(3679..>4648)
                     /locus_tag="VF061_05435"
     CDS             complement(3679..>4648)
                     /locus_tag="VF061_05435"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HEX6668976.1"
                     /translation="GVASQGLGVLFLKYGRDAETQADDLGFRYALGLNYDVREMANVF
                     ETLNRASQVGGGTGGRLPEWLSTHPNPENRVARTQARLDTLQAPLGNTIVGRDEFLRQ
                     IDGLTFGEDPRQGFFEGGMFYHPDMQFQLQFPDGWRTQNTPSAVVALSPKEDAIIQLG
                     LAGNAPPREAASKFLSQEGIQAGDASTSSINGNQAATSYFQAQTQQGVIEGIVSFISY
                     GGRTFGLMGYTPQGGLRSYDDDLRGTINSFDRLRNSAALSVKPAVLQLVRLPSQMTLA
                     QFNSQYPSTTSIEELAIINEVEGPESVLPRGRTVKRVVGGRIPSTR"
BASE COUNT          743 a         1651 c         1597 g          657 t
ORIGIN      
        1 ggcccggttc cggtcggtct cgtcggtgag ggcggcggct tcttccgggg agacgccgag
       61 gcgccgcgcg atgacctgga cccgccagtc gcgtggggcg acgaccttca cgtggatcgc
      121 gtcccgctcc tgcgccagca cggccggtgc cgcgcggccc accagcacca ccctgccctc
      181 ggccgcgatc tcctcgacca cgtgctcggt gatccggacc aggtcctcct cggagagggt
      241 cggcgcggtg ccgcccgcct ccggcggcac caccagctcc ggagtcgccg ccaccacggt
      301 gcgcgccagg cgctcgatga acgtcgagac ccgctcctcg cgctgggcca cgtcctccgg
      361 cgtcaggccc gcccgcgcgg cgacccgctc gatcagctcg ttgtccacca cgcgccagcc
      421 gagccggccg gcgaccagcg cggccagctc ggagccgccg gcgccgtact gccgggagat
      481 ggtgatcagc atcgcaccaa gttacctgcc ttccgccctt ccctccgggt cgcgtagccc
      541 accagcccgg ccatgagcac gcaggcgagc ccgccgagcg cgaacgccgt ccgcacgccg
      601 aagtgctccg agagccagcc cgcctgcagc gcgccgaacg gcgccatccc gagcaccacg
      661 aaggagtaga agcccatcac ccgaccccgg agccggtccg gcgcctcgag ctggagcatc
      721 gtgttggcca tgatgccgtt caccgccatg aggcctcccg ccaccgtgaa gagcgcgagt
      781 gctccccaga atccccgcac gtagcccccg caggccagca ccgccccgaa gacggcgaag
      841 gtcagaatca ccacccggcc ccgtcgcacc cgcccgcccg cggccgccat gccgatcgct
      901 ccggacgcgg cgccgagccc gatggcggag acgatggcgc cgtagccgtc ggcgtcgagc
      961 cccagcacgt cgcgggcata gaccggcatc atggggagaa acgaggcccc gaacacggtg
     1021 aatccggcga cgatggtgac caacgcccgg ggccaggaat tcccgaagat gtagccgaag
     1081 ccctctttca gcgcccccag cgccggcgtc cgggacgggg tcgcggggcg gcgcacccgc
     1141 atcagcagca gcccggtcag gaccgcgaga tagctggccg cgttgaggta gaagcaggcc
     1201 gccaggccca cggtcgcgat cagcgcgccc gcgatcgagg gtccgatgac ccgggccacg
     1261 ttgaaggcgc tggagttgag ggcgatggcg ttcatcaggt cgtccttgcc cacgatctcg
     1321 ctcaccagcg cctgccgggt ggggacctcg aaggcggaga gcaggccgta gaacgaggcg
     1381 agggccatca ccagatgcac ggtgatccag ccctggtgcg tcagcaccgc gagggccagc
     1441 gcctccagca gcatgccgct ctggagcagg atgacgaagc gacgcttgtc cacccgatcg
     1501 gcgaccacac cgccgtacag ggtgaacagg agaatgggca gcgagccgag ggccgtcacc
     1561 aggccgaccg cgaacgcgga gtcggtcagc tggagcacca gccacccctg tgcaacggtt
     1621 tgcacccagg tgccgcactg cgacaccagc tggccgccca ggaagagccg gaagtcgcgg
     1681 tggcggagcg cggagaagac ggagggcggg gtgggcacgt ggggaagtta gtaaggcggt
     1741 aaggcggtaa ggcggtaagg cggtaaggcg gtaaggcggt gcgaagggaa atgcctgcag
     1801 ggagagttgt catcctgagc ggagcgaagg aggccatgcc ggcatgggcc ccttcgctgc
     1861 gctcagggtg acatccctac cgccctaccg ccttccgctt ctacccaacc ctccccggcg
     1921 gcgttattcc tacaatatgc gcttcaccac ctactccaag ttccaccccg agctcgccga
     1981 cgccgtcaac ctccaggggc tgctggacca gctgagcgac ttcctgctcc agtccggctt
     2041 cgccggaggg tccccgtcgt tctggcacga cgaggggggc gagggtgagc ggtcgctgga
     2101 ggccctccgg caggccatcc tgcaggccct gatggagtcg ggtcagctca ccccggagat
     2161 gctcaaggcc ctccggggcg agtcgagcgg ggacccggag cgggaccagc aggtggagcg
     2221 ggagctgagc gagttgctcg accggatcgt ccagcgcctc atggacgagg gctacctcaa
     2281 cgtgggtcag gcgccccagg tgccccaggg ctaccagtcc atgttcggcc cggggggcca
     2341 ggcccactcc gcggcgcagc aggtgcagtt caacctcacc gagaagggca tcgacttcct
     2401 gggctacaag accctcaagg gcctgctcgg cagcgtgggc aagtcgagct tcggcgcgca
     2461 cgacaccccg tacctcgcca ccggcgtgga ggcggagggg gtgagcaagc cgtacgagtt
     2521 cggggacgtg ctcaacctcg acgtgcccgc caccctcacc aacgccatcg cgcgcgaggg
     2581 cctcggcgtc ccgctcaaca tcgagtacca ggacctgatg gtgagccagt cggagtaccg
     2641 ctcgtccgcc gcgacggtgc tgatgctcga ctgctcccac tcgatgatcc tgtatggtga
     2701 ggaccgcttc acgccggcca agaaggtggc cctcgccctc acccacctca tccgcaccca
     2761 gttccccggc gacagcctgc gggtggtgct gttccacgac tcggccgagg agatcccgct
     2821 gagcgcgctg gcccaggcgc aggtgggtcc ctaccacacc aataccgccg aaggcctcaa
     2881 gctcgcccgc cggatcctgc tggcgcagaa gaaggacatg cgccagatca tcatgatcac
     2941 ggacgggaag ccctccgcgc tcaccatgcc cgacgggcgg atctacgtga actcgatggg
     3001 cctcgatccg cagatcctgc aggccaccta ccgcgaggtc gcgaactgcc ggcgcagcgg
     3061 catcatgatc aacaccttca tgctcgcccg cgaccgcagc ctggtggagt tcgtcaagca
     3121 ggtggcatcc atctgcaagg gcaaggcgta tttcaccaac acgatgacgc tggggcagtt
     3181 catcctgatg gacttcatga agcggaaaac ccggagggtg tcgtagcccg gccgcgcgtc
     3241 gtcacccgga acgaagtgaa ggggaccatg accgccatgg cccccttcgc tgcgctcagg
     3301 gcgacggtcc cggcctgggc gttggccctc gccgcgctgc acgggtgcgg ccgagggccg
     3361 gccaccggct ccgccacggc ctacaccgtt cccctgagcg ccgccgaggc gccgatggtg
     3421 acggtgcggc agatcgtgga gcgcgacacc ctgctgggcc ggcgcgtccg ggtgggcggc
     3481 gtctgcgcca tcgcccaggt cggccgctcg gccggcgtct ggctgctcca ggcgggcgcc
     3541 tgggcgatcg aggtccgcgg gctggtgccg cggtcctgct atcgcgatcc ggtcggcacc
     3601 gaggccctca ccatcttcgc ccaggtggtg gagggcacgg acagcaccga gcggctcctg
     3661 ctccggcttc ccgagtgatc acctcgtgga gggaatccgg ccgcccacca cgcgcttgac
     3721 ggtgcggccc cggggcagca ccgactcggg gccctccacc tcgttgatga tcgcgagctc
     3781 ctcgatcgag gtggtcgagg ggtactgcga gttgaactgg gcgagggtca tctggctggg
     3841 cagccgcacc agttgcagta cggcgggctt caccgaaagc gccgccgagt tgcgcagccg
     3901 gtcgaagctg ttgatggtgc cccgcaggtc gtcgtcgtag gaccgcaacc cgccctgggg
     3961 cgtgtagccc atcagcccga aggtccgccc cccgtacgag atgaacgaga cgatcccctc
     4021 gatcacgccc tgctgggtct gggcctggaa gtagctcgtc gccgcctggt tcccgttgat
     4081 gctgctggtg ctcgcgtctc ccgcctggat gccctcctgg gagaggaact tcgacgccgc
     4141 ctcccggggc ggtgcgttgc ccgcgaggcc gagctggatg atggcgtcct ccttggggct
     4201 cagcgcgacg acggcgctgg gcgtgttctg ggttctccat ccgtccggga actggagctg
     4261 gaactgcatg tcgggatggt agaacatccc gccctcgaag aagccctggc gcgggtcctc
     4321 gccgaaggtg agtccatcga tctgccgcag aaactcgtca cggccgacga tcgtgttccc
     4381 caggggagcc tggagagtgt cgagccgcgc ctgggtgcgg gccacccggt tctcgggatt
     4441 ggggtgggtg gagagccact cggggagccg gcccccggtg ccgcccccca cctggctcgc
     4501 gcggttgagc gtctcgaaga cgttggccat ctcgcgcacg tcgtagttga ggccgagcgc
     4561 gtagcggaac ccgaggtcgt cggcttgggt ctccgcgtcg cggccgtact tgaggaacag
     4621 gaccccgagc ccctggctcg ccaccccg
//
LOCUS       DASUYN010000273         3157 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1631369, whole genome shotgun sequence.
ACCESSION   DASUYN010000273 DASUYN010000000
VERSION     DASUYN010000273.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3157)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3157)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3157
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1631369"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..450)
                     /locus_tag="VF061_05440"
     CDS             complement(<1..450)
                     /locus_tag="VF061_05440"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX6668977.1"
                     /translation="MWRPDRSVRGPARPSYRDIDPLNRVFAEAFTDRYSRDGLVGVRV
                     PQLNPLVWRYAIDDAGDGAMIWRDAEGHMVGFNMVHRSGTEGWMGPLAVRPDRQGEGL
                     GSLMVRSGIEWLKSQGAATIGLETMPRTVDNIGFYSRIGLVPGHLTVT"
     gene            complement(437..2857)
                     /locus_tag="VF061_05445"
     CDS             complement(437..2857)
                     /locus_tag="VF061_05445"
                     /inference="COORDINATES: protein motif:HMM:NF014516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMC family ATPase"
                     /protein_id="HEX6668978.1"
                     /translation="MQINRIHLRNFRQHEDTELELGAGLTGIIGPNGAGKTTILEAIA
                     WAMYGMPAARGSRDTIRRRGAGPRERVEVELDFALGAHHYRILRSLNGAQLYQDGDAS
                     PIANSLGSVTDRVTRLLGMTREEFFNTYFTGQKELAVMAAMSAPERAQFLSRVLGYDR
                     IRAAQDRLREKRSALRARLDALRASLGDPAELDAAEAKARERVAAAAAAEASTEAAWR
                     GVERKLAEARPHAERLQQLRDADLELEAELRVTEHLLSASAQQIARLEQQVAEAQGAG
                     VRLGEVNRRLEALPDLRAQGGALERLAEAHVRRRGLTAQLSDVRTHLGSVDERIARLP
                     SEGSVEQARLRTNDLRASLTAVTLEAESARTAWVRDAQDARTKRQGLADQYQELREQR
                     QRLLKAGPQGNCPTCTRPLGAEYENVLGLLDRQIEEVVSNGNFYKQRIDQLQNEPPEL
                     DELDRSRLEVERNLTEATADLARLEAQTQDAGPLSEERARLLARVAELDAALGAAPEA
                     YDERRHREVQRLIRELEPLALEAERLRVVGDRAAAMGEELVGAGRERAEVEARATALR
                     ARRVELGYSEADHRAARDVAAAAERERREAEVALARAKGESAAAAEAVAAAERRRAEW
                     AAREREAAATGRDLALHQELDRALSDLRGELNATLRPDLSDLASSFLRDLSNGRYTEL
                     ELNEDYGTTLLDDGDPKAVISGGEEDIANLALRLAISQMIAERAGQPLSLLVLDEIFG
                     SLDEDRRVAVVDLLRSLADRFPQVILITHIDSVRDGFDRVIRVGLDVTRGVATAHDEP
                     LAGHDVAA"
     gene            complement(2857..>3157)
                     /locus_tag="VF061_05450"
     CDS             complement(2857..>3157)
                     /locus_tag="VF061_05450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668979.1"
                     /translation="ADRIVRLRVYDVPRHIARELDHASIRAWKSEALHFHLDIRRPEV
                     HRTVGVSAPGRRQTLPDLVRDYLRGRPLPAELDREAFVRLGGELMDSVERDLAGT"
BASE COUNT          381 a         1189 c         1124 g          463 t
ORIGIN      
        1 cgtcacggtc aggtgtcccg gcaccagtcc gatccggctg tagaacccga tgttgtccac
       61 cgtccgcggc atggtctcga ggccgatggt ggcggcaccc tggctcttga gccactcgat
      121 cccgctgcgc accatgagcg agccgaggcc ttcgccctgg cggtcggggc ggacggcgag
      181 cgggcccatc catccctccg tcccggagcg atgcaccatg ttgaagccca ccatgtggcc
      241 ctcggcgtcg cgccagatca tggccccgtc gcccgcatcg tcgatggcat accgccagac
      301 cagcgggttg agctgcggga cccggacgcc caccagcccg tcgcggctgt agcggtcggt
      361 gaaggcctcg gcgaagaccc ggttcagcgg atcgatgtcc cggtagctgg ggcgcgccgg
      421 cccccggacg ctgcgatcag gccgccacat cgtgtcccgc caggggctcg tcgtgcgcgg
      481 tcgcgacccc gcgggtgaca tccaggccga cccgaatcac ccgatcgaat ccgtcgcgca
      541 ccgaatcgat atgggtgatg agaatgacct gggggaaccg gtcggccagg ctgcggagca
      601 ggtccaccac cgccacccgc cggtcctcgt ccagggaccc gaagatctcg tcgagcacga
      661 ggagcgagag cggctggccg gctcgctccg cgatcatctg gctgatggcg agccggagcg
      721 cgaggttggc gatgtcctcc tcgccgccgg agatgacggc cttgggatcc ccgtcgtcga
      781 gcagcgtggt gccgtagtcc tcgttcagct ccagctcggt gtagcggccg ttgctgaggt
      841 cccggaggaa ggacgacgcc aggtccgaga gatcgggccg gagtgtggcg ttgagctcac
      901 cccggagatc ggagagggcg cggtcgagct cctggtgcaa ggcgaggtcg cgaccggtgg
      961 cggcggcctc ccgctcccgc gccgcccact ccgccctccg ccgctcggcc gcggccaccg
     1021 cctccgcggc cgcggcgctc tcccctttgg cccgggccag ggccacctcc gcctcccgcc
     1081 gctcgcgctc cgccgctgcc gcaacatctc gcgccgcccg gtggtccgct tcgctgtatc
     1141 ccagctcgac ccggcgggca cggagcgccg tggcgcgagc ctccacctcc gcccgctcgc
     1201 gcccggctcc caccagctcc tcccccatcg cggcggcgcg gtcgcccacg acccgcagcc
     1261 gctcggcctc gagcgccagc ggctccagct cgcggatcag ccgctgcacc tcccggtgcc
     1321 ggcgctcgtc gtacgcctcc ggcgccgcgc cgagggcggc gtccagctcc gccacgcggg
     1381 cgagcaggcg cgcgcgctcc tccgagagcg gtccggcgtc ctgcgtctgc gcctcgaggc
     1441 gggcgaggtc ggcggtcgcc tcggtgaggt tccgctcgac ctcgagccgc gagcggtcca
     1501 gctcgtcgag ctcggggggc tcgttctgga gctggtcgat ccgctgcttg tagaagttgc
     1561 cgttgctcac gacctcctcg atctgacggt cgagcaggcc gagcacattc tcgtactccg
     1621 cccccagcgg acgggtacag gtcgggcagt tgccctgcgg ccccgccttg agcaatcgct
     1681 ggcgctgctc gcgcagctcc tggtactggt cggccaatcc ctggcgcttg gtccgggcat
     1741 cctgcgcgtc gcgcacccat gccgtgcggg cgctctcggc ttccagcgtc accgcggtca
     1801 gggacgcgcg gaggtcgttg gtgcggagcc gagcctgctc gacgctgccc tccgacggca
     1861 ggcgcgcgat ccgctcgtcc accgatccga ggtgggtccg gacatcgctg agctgcgcgg
     1921 tcagcccccg gcgtcgcacg tgggcctcgg ccaggcgctc cagcgcgccg ccttgcgcgc
     1981 ggaggtcggg cagggcctcc aaccggcgat tgacctcgcc cagccgcacg ccggcgccct
     2041 gcgcttcggc gacctgctgc tcgaggcgcg cgatctgctg ggcggaggcg ctcagcaagt
     2101 gctcggtgac gcgaagctcg gcctccagct cgagatcggc atcgcgcagc tgctggaggc
     2161 gctcggcgtg gggccgggcc tccgccagct tccgctccac cccacgccac gccgcctcgg
     2221 tcgaggcctc ggcggccgcc gcggccgcca cccgctcgcg ggccttggct tcggccgcgt
     2281 cgagctcggc ggggtcgccg agactcgcgc gcagggcgtc gagccgggcc cgcagcgccg
     2341 agcgcttttc ccggagccgg tcctgcgcgg cccggatgcg atcgtagccg agcacccgcg
     2401 agaggaactg ggcccgttcc ggcgcgctca tcgccgccat cacagccagc tccttctggc
     2461 cggtgaagta ggtgttgaag aactcctccc gggtcatgcc gagcaggcgg gtgacccggt
     2521 cggtgaccga gccgagactg ttcgcgatcg gggaggcatc gccgtcctgg tagagctgcg
     2581 cgccgttgag cgatcgcagg atgcggtagt gatgggcgcc gagggcgaag tccagctcca
     2641 cctcgacccg ctcgcgcggg ccggcgcccc ggcgtcggat cgtgtcgcgg ctgccgcgcg
     2701 ccgccggcat gccgtacatc gcccacgcga tcgcctcgag gatggtggtc ttccccgcgc
     2761 cgttcggccc gatgatgccc gtcagcccgg cgcccagctc cagctcggtg tcctcgtgct
     2821 ggcggaagtt gcggaggtgg atgcggttga tctgcatcag gtccccgcca ggtcgcgctc
     2881 gaccgaatcc atcagctcgc caccgagccg cacgaacgcc tcgcggtcga gctcggcggg
     2941 caggggccgg ccccggagat agtcgcgcac caggtcgggg agcgtctgcc ggcgccccgg
     3001 cgcgctgacc cccacggtgc ggtgcacctc cggccggcgg atgtcgaggt gaaagtgcag
     3061 cgcctccgac ttccaggcgc ggatggaggc gtggtccagc tcgcgggcga tgtggcgcgg
     3121 cacgtcgtat acccggagcc gcacgatgcg gtcggcg
//
LOCUS       DASUYN010000274         2374 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1410491, whole genome shotgun sequence.
ACCESSION   DASUYN010000274 DASUYN010000000
VERSION     DASUYN010000274.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2374)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2374)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2374
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1410491"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..295
                     /locus_tag="VF061_05455"
     CDS             <1..295
                     /locus_tag="VF061_05455"
                     /inference="COORDINATES: protein motif:HMM:NF016992.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PilN domain-containing protein"
                     /protein_id="HEX6668980.1"
                     /translation="EPVTTSAPGGSSDSTKAEPFVSPAVVFNVNGRTVDIQAYTRFLR
                     QLEASPWITDVTPVSAQTIVEKERPVTAFTIRATYRQADSAYIRTVPLSESVR"
     gene            301..927
                     /gene="pilO"
                     /locus_tag="VF061_05460"
     CDS             301..927
                     /gene="pilO"
                     /locus_tag="VF061_05460"
                     /inference="COORDINATES: protein motif:HMM:NF016253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA];
                     GO_process: GO:0043683 - type IV pilus assembly [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type 4a pilus biogenesis protein PilO"
                     /protein_id="HEX6668981.1"
                     /translation="MALSQKSTPVLMMLLAGITGYIAYTGAVIETAGMSGLVAREERV
                     TAIRDTIARLEAATDSAKRELARGSVEDLRRRLETYRGSLSLLRRLVPERNEVPNLLD
                     DISSRSRIRGVTLATVVPLPVEAGPAPFNTYKYNMSVIGRYDQIGQFLADVASLQRII
                     VPYDVSLDQANASAAKALGDTSGSLLEAKFQVRTFVKSSTPEGQASGS"
     gene            917..1519
                     /locus_tag="VF061_05465"
     CDS             917..1519
                     /locus_tag="VF061_05465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668982.1"
                     /translation="MARNALLGFALLAALAGCSPAGDEAEAQAAEAQLAALRAHNDSL
                     RQARPAAAPDTGARSTLAATTPGADSARTDTLTLAEAELTDSIRKAREIEVMRETFAY
                     SGGSRDPFASLLNSSAAGPEIADLDLVGVYQDLRSSSNSVVVLREKATAKRHKLRVGD
                     QLGRARLVQIRPRDAVFTIRDFGFERQETLSLRKQEVETP"
     gene            1516..>2374
                     /locus_tag="VF061_05470"
     CDS             1516..>2374
                     /locus_tag="VF061_05470"
                     /inference="COORDINATES: protein motif:HMM:NF023169.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMIN domain-containing protein"
                     /protein_id="HEX6668983.1"
                     /translation="MTGLYRKILSATAHTQALLLAAALVAGGAAPVRAEGPGTGEVTA
                     VSLAPAAGKAELVIAVKGAVDVRDFVLASPDRLVLDVVGAKLSEAAPAAYDGMVRGGV
                     LNIRYSQFRPDIVRIVVELDGPKAYEVTRQGESVKVAFGAAQGFQAWTSTAALAEVAQ
                     DEAPAKASTQAPAKAPEVRPSLSRARAVQFGRGAEEPRITVTWDRASIADVVAGFAAF
                     SGRTIIIGKDVKGEVTAEVKNQPWPMAFQAILASQGLSAQEMAGGIIRVDAPGVLSAL
                     DSLEPLETSI"
BASE COUNT          364 a          848 c          820 g          342 t
ORIGIN      
        1 cgaaccggtg acgacgtccg cccccggcgg cagcagcgac tccaccaagg ccgagccctt
       61 cgtgagcccg gcggtggtct tcaacgtgaa cggccggacg gtggacatcc aggcgtatac
      121 ccggttcctc cgtcagctgg aggcttcgcc ctggatcacc gacgtcacgc ccgtctcggc
      181 gcagacgata gtcgagaagg agcgtccggt caccgcgttc accatccggg ctacgtaccg
      241 ccaggctgac tcggcgtaca tccggacggt tcccctcagc gagtccgtga ggtaggcgcc
      301 atggccctgt cccagaagtc cacgcccgtg ctgatgatgc tgctcgccgg catcacgggg
      361 tacatcgcct acaccggcgc ggtcatcgag accgcgggca tgtccgggct cgtcgcacgc
      421 gaggagcggg tcaccgccat tcgcgacacg atcgcccggc tcgaggccgc caccgacagc
      481 gccaagcgcg agctcgcgcg cggctcggtg gaggacctcc gccgccggct ggagacctac
      541 cgcggcagtc tgtcgctgct ccgccgcctg gtcccggagc ggaacgaagt ccccaacctg
      601 ctggacgata tttccagccg gagccggatc cgcggagtca cgctggcgac cgtggtgccg
      661 ctgccggtag aggcggggcc ggcgcccttc aacacgtaca agtacaacat gtccgtcatc
      721 ggacgctacg accagatcgg tcagttcctg gccgacgtgg cgagcctgca gcggatcatc
      781 gtgccctacg acgtttcgct cgaccaggcc aacgccagcg cggccaaggc cctcggcgac
      841 accagcggct ccctgctgga ggccaagttc caggtccgca cgttcgtcaa gtcttccact
      901 ccggagggac aggccagtgg ctcgtaacgc tctgctcggg ttcgccctgc tcgcggctct
      961 ggccggctgc tcgccggccg gggacgaggc ggaagcccag gcggccgagg cgcagttggc
     1021 cgcgctgcga gcccacaacg acagcctccg gcaggcgcgg cccgcggccg cgccggacac
     1081 cggggccagg agcacgctgg ccgccaccac gcctggggcc gacagcgctc gaaccgatac
     1141 gctcacgctg gccgaggcgg agctgacgga ttcgatccgg aaggcgcggg agatcgaggt
     1201 gatgcgcgag acgttcgcct attccggggg ctcgcgcgac cccttcgcct cgctgctcaa
     1261 tagctccgcg gcgggcccgg aaatcgccga cctcgacctg gtcggggtgt accaggacct
     1321 ccgcagcagc agcaacagcg tcgtcgtgct gcgggagaag gccaccgcca agcgccacaa
     1381 gctgcgtgtc ggtgaccagt tgggacgcgc gaggctggtc cagatccgcc cgcgcgacgc
     1441 cgtgttcacc attcgtgatt tcgggttcga gcgccaggaa actctctcgc tgcggaagca
     1501 ggaggtcgag acgccatgac cggattgtat cgcaagatcc ttagcgccac cgcccacacc
     1561 caggcgctgc tgctcgcagc tgccctggtg gccggcggcg cggcccctgt ccgggccgaa
     1621 ggcccaggga ccggggaggt cacggcggtc agcctggcgc ccgccgccgg caaggcggag
     1681 ctcgtgatcg ccgtgaaggg cgcggtggac gtccgcgact tcgtcctcgc ttctcccgac
     1741 cgcctggtgc tcgatgtcgt gggtgccaag ctgagcgagg ccgccccagc ggcctacgac
     1801 gggatggtgc gggggggcgt gctcaacatc cgctactccc agttccggcc cgatatcgtc
     1861 cggatcgtgg tcgagctcga cggccccaag gcttacgagg tcacccgtca gggcgagtcc
     1921 gtcaaggtgg cgttcggtgc ggctcagggc ttccaggcct ggacctccac cgccgcgctc
     1981 gccgaggtcg cccaggacga ggcgccggcg aaggcgtcaa cgcaggcgcc ggccaaggcg
     2041 cccgaggttc gtccgtcgct ctcgcgtgcc cgcgccgtcc agttcggccg cggtgccgaa
     2101 gagccccgga tcaccgttac ctgggaccgc gccagcatcg ccgacgtggt ggccggcttc
     2161 gccgccttca gcggccgcac catcatcatc ggcaaggacg tgaagggtga ggtcaccgcc
     2221 gaggtgaaga accagccctg gccgatggcg ttccaggcga tcctggcgag ccagggactc
     2281 tccgcccagg agatggcggg cgggatcatc cgggtggatg ccccgggggt gctctcggct
     2341 ctcgactcgc tcgagccgct ggagaccagc atcg
//
LOCUS       DASUYN010000275         4551 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_748639, whole genome shotgun sequence.
ACCESSION   DASUYN010000275 DASUYN010000000
VERSION     DASUYN010000275.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4551)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4551)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4551
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_748639"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..261)
                     /locus_tag="VF061_05475"
     CDS             complement(<1..261)
                     /locus_tag="VF061_05475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668984.1"
                     /translation="MPRTRALLPLLALSLVAACGDSDNLAEPTTENIVDTVTVGSLTD
                     TPITTASGFSVSAGAIRTDLDAGFDFAYDIQGAPETGLKVMLP"
     gene            383..733
                     /locus_tag="VF061_05480"
     CDS             383..733
                     /locus_tag="VF061_05480"
                     /inference="COORDINATES: protein motif:HMM:NF015232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="roadblock/LC7 domain-containing protein"
                     /protein_id="HEX6668985.1"
                     /translation="MTGLADVLRGLAARDGVQGALLLSGEGLPIEHAGGGFEPETVAA
                     LSATLARYAGQLGDGAARGELRTAVLDFARGPVVLARAGASDWVAVLTRPETDIGPLL
                     YDLRHHGPALVGLL"
     gene            741..1772
                     /locus_tag="VF061_05485"
     CDS             741..1772
                     /locus_tag="VF061_05485"
                     /inference="COORDINATES: protein motif:HMM:NF012695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HEX6668986.1"
                     /translation="MRWAVLLAGGSGTRFWPLSTPETPKQLLPLTGPGSSAEDAVDRL
                     AGLIPRERTLVVAGAGLAARLQERLELPPENVLVEPRAASTAPALIWATWEACRRDPD
                     AEVLSLHADWAVGDPAAFRDTAEIALAAARHHDRLVTVGIVPSRPETGYGYIVPGPPL
                     DQSARSVARFSEKPDAATALDLMASGALWNSGLFAWTATRLLAEVEAHTPEVAGAVRA
                     LEENDVTRYFEEVVPVSIDVGLLERSRAVAVVRGEFAWDDVGTWQALARVRAKDPAGN
                     VVVGPALLHESQDCVVWSDGDPIVLYGVQEMVVVHANGRILVMPAERAATIKQLLDAL
                     PPAIRDTGP"
     gene            1769..2938
                     /locus_tag="VF061_05490"
     CDS             1769..2938
                     /locus_tag="VF061_05490"
                     /inference="COORDINATES: protein motif:HMM:TIGR03991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative sugar nucleotidyl transferase"
                     /protein_id="HEX6668987.1"
                     /translation="MTSLYLLEPDPAGPAWAPFAGVRPVAELRAGLWRIRERWEGALQ
                     RDTTAILGAHIAGFSEFDEPPARGPMPIEGPAIIAASWFAPSGAPIESAAPVRRLTHG
                     GATVAWVVPSGEHWERPHDDGPGLEVDGVLLRGAHDLITALEKLLSADCADFRAAPST
                     GVPEGSIVLGDPADVICLRAAVEPGVVFDVRSGAVVIEEGAEVRSGTRLEGPIYVGGG
                     TRVLGGFIRGSVFGPECRVRGEIASTVFLGYGNKAHDGFVGHSVVGHWVNLGAGTTTS
                     NLKNTYGPVRLEVNGTRIETGRSNLGTLFGDHAKTAIGTMLATGTVVGAGANVFGTPT
                     PPKHVLPFAWGCQGERVTEHGFLTIARRVLARREVTWSDAREDSLRRVYARSLAR"
     gene            2935..3744
                     /locus_tag="VF061_05495"
     CDS             2935..3744
                     /locus_tag="VF061_05495"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX6668988.1"
                     /translation="MTTLYVLGSGSRGNCCAVEHDGAAVLIDAGFSPREIERRAEATG
                     LALEQVGAIVLTHEHGDHARGAGRLARRLGVPVLTAPGTWARLGLRVRHAEHRALGLC
                     ARVDIGPFAVTACPTSHDAAEPLALAVECADGTRVGVAYDLGRPTAAVRYLLRDLTAI
                     VLEANHDDVLLRTSRYPPVVQRRIAGSSGHLSNRAAAELLAEVHHPGLGVVVLAHLSQ
                     QCNTADDARATVAPALRRAGFCGALHVADQDEPLGPIPVVVAGGAQLRLAL"
     gene            complement(3757..4140)
                     /locus_tag="VF061_05500"
     CDS             complement(3757..4140)
                     /locus_tag="VF061_05500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668989.1"
                     /translation="MRLGWMLAAGLAWAVPGSAEAQAPAIFGTWKFDLKQGDKKPGPR
                     TVIVRPDSSASYGAETVRWRIVGDSLALALGGEWVNYRLKVRNRRLTLSGGDLTEPVT
                     FELVGPPTPRPDTIPIPPDPDTEPI"
BASE COUNT          600 a         1599 c         1693 g          659 t
ORIGIN      
        1 cgggagcatc accttgagtc ccgtctcggg cgccccctgg atgtcgtagg cgaagtcgaa
       61 gcccgcatcg aggtcggtgc ggatggcacc ggcgctcacg gagaacccgc tggcggtggt
      121 gatcggggtg tcggtgagcg agccgacggt cacggtgtcc acgatgttct cggtggtcgg
      181 ctcggcgaga ttgtcgctgt cgccgcacgc ggccaccagg gacagcgcga ggagcgggag
      241 cagggcacgg gttctcggca tggaagggga aggttaagag cggaatcgag tcgggtcaac
      301 cgcgcgtggt ttcttgactt cgaccctgcc gagcctctag gttgccgtca ccttttcctc
      361 ccctgatcat ggagtgcgat ggatgaccgg actcgccgat gtgctgcgtg gtctcgcggc
      421 gcgcgacggg gtacagggcg cgctgctcct gagcggcgaa ggcctgccga tcgagcacgc
      481 gggcggcggc ttcgagccgg agacggtggc ggccctgtcg gcgacgctcg cccggtacgc
      541 ggggcaactc ggcgacggcg cggcgcgcgg cgagctgcgg accgcggtgc tcgacttcgc
      601 gcgcggtccg gtggtgctgg cgcgcgcggg cgcgtccgac tgggtcgccg tcctcacccg
      661 accggagacc gacatcggtc ccctgctcta cgatctccga catcacggcc ccgccctggt
      721 cgggctcctg tgagtcgctg atgcgttggg ccgtccttct cgccggtggc tccggcaccc
      781 gcttctggcc gctcagcacg ccggagacac cgaagcagct gctgccgctc accggccccg
      841 gctcgagcgc cgaagatgcg gtggaccgcc tcgcggggct gatcccccgc gagcgcacgc
      901 tggtggtggc gggcgccggc ctggccgcgc ggctccagga gcggctcgag ctgccaccgg
      961 agaacgtgct ggtcgagccg cgcgctgcgt ccaccgcacc ggcgctcatc tgggccacct
     1021 gggaggcgtg ccgccgtgat cccgatgccg aggtcctctc gctccacgcc gactgggcgg
     1081 tgggcgaccc ggccgccttc cgggacaccg cggagatcgc cctggccgcg gcccggcacc
     1141 acgaccggct ggtgaccgtg ggcatcgtgc cgtcccggcc cgagaccggc tacggataca
     1201 tcgtccccgg cccgccgctg gaccagtcgg cgcgcagcgt cgcccggttc tcggagaaac
     1261 ccgatgccgc gacggcgctc gacctgatgg cttccggcgc gctctggaac agcggcctct
     1321 tcgcctggac cgccacccga ctcctggcgg aagtcgaggc ccacacgccg gaggtggccg
     1381 gcgccgtgcg ggcgctggag gagaatgacg tcacccgcta cttcgaggag gtggtgcccg
     1441 tctcgatcga cgtgggcctc ctcgagcggt cccgcgcggt cgcggtggtc cgcggcgagt
     1501 tcgcctggga cgacgtgggg acctggcagg ccctggcccg agtccgcgcc aaggacccgg
     1561 ccggcaacgt cgtcgtcggc cccgcgctgc tgcatgagag ccaggactgc gtggtgtggt
     1621 ccgacggcga tccgatcgtg ctgtacggcg tgcaggagat ggtggtggta catgcgaatg
     1681 gccgcatcct ggtgatgccg gcggaacgcg ccgccacgat caagcagctg ctggacgccc
     1741 tgccccccgc catccgcgac accggaccgt gacttccctc tatctgctcg agcccgatcc
     1801 cgcgggcccg gcatgggccc cgttcgccgg ggtgcggccg gtcgccgagc tgcgggcggg
     1861 gctgtggcga atccgggagc ggtgggaggg cgcgctccag cgggacacga ccgcgatcct
     1921 cggcgcgcac atcgccgggt tcagcgagtt cgacgagccg ccggcgcggg ggccgatgcc
     1981 gatcgaggga ccggcgatca tcgccgcctc ctggttcgcg ccctcgggcg cgccgatcga
     2041 gtcggcggcg ccggtgcggc ggctcaccca cggcggggcc acggtggcct gggtggtgcc
     2101 ttcgggtgag cactgggagc ggccccacga cgacggaccc ggcctcgagg tggacggcgt
     2161 cctcctccgc ggcgcgcacg atctgatcac ggcgctggag aagctgctga gtgcggactg
     2221 cgccgacttc cgggcggcgc cctccaccgg ggttcccgag gggtccatcg tgctgggtga
     2281 tccggcggac gtgatctgcc tgcgtgccgc ggtcgagccg ggcgtggtgt tcgacgtgcg
     2341 gagcggcgcc gtcgtgatcg aggagggggc cgaagtccgc agcggcacgc ggctggaagg
     2401 accgatctac gtcgggggcg gcacccgggt gctgggcggg ttcatccgcg ggtccgtgtt
     2461 cggccccgag tgccgggtcc gtggcgagat cgcatccacg gtgttcctgg gctacggcaa
     2521 caaggcgcac gacgggttcg tcggccacag cgtcgtgggt cactgggtca atctcggcgc
     2581 cggaaccacg acctcgaacc tcaagaacac ctacggcccc gtgcggctgg aggtgaacgg
     2641 cacccggatc gagaccggcc gctccaacct gggcacgctg ttcggcgatc atgccaagac
     2701 cgcgatcggc accatgctgg ccaccggcac ggtggtgggc gcgggcgcca atgtcttcgg
     2761 caccccgacg ccgcccaagc acgtgctacc gttcgcctgg ggctgccagg gagagcgggt
     2821 gacggagcac ggctttctca ctatcgcgcg gcgggtcctg gcgcggcggg aggtgacgtg
     2881 gtcggacgca cgggaagact cgctccgtcg ggtctacgcc aggagcctcg cgcgatgacc
     2941 acgctctacg tcctcggctc ggggtcgcgg ggaaactgtt gcgcggtgga gcacgacggc
     3001 gccgcggttt tgatcgatgc cgggttcagc ccccgggaga tcgagcggcg cgccgaggcc
     3061 accgggctgg cgctcgagca ggtgggcgcc atcgtgctga cccacgagca cggcgaccac
     3121 gcccgtggcg cggggcggct cgcgcgccga ctgggggtgc cggtgctgac cgcgccgggg
     3181 acctgggccc gactgggcct ccgggtgcgt cacgccgagc atcgcgcgct ggggctctgc
     3241 gcccgggtgg atatcgggcc cttcgccgtg accgcctgcc ccaccagcca tgacgccgcc
     3301 gagccgctgg cgctggcggt ggagtgcgcc gacgggaccc gcgtcggagt ggcctacgat
     3361 ctcggccgtc cgaccgcggc cgtgcgctac ctgctccgcg atctcacggc gatcgtgctg
     3421 gaggcgaatc acgacgacgt tctgctccgc accagccgct atcccccggt ggtccagcgg
     3481 cgcatcgcgg gctccagcgg gcatctctcg aaccgcgccg cggccgagct gctggcggag
     3541 gtgcatcatc ccggcctggg cgtcgtggtg ctggcgcacc tgagccaaca gtgcaacacc
     3601 gccgacgacg cgcgcgccac ggtcgccccg gcgttgcggc gagcggggtt ctgtggcgcg
     3661 ctgcacgtgg cggatcagga tgagccgctg gggccgattc ccgtggtggt ggcaggagga
     3721 gctcagctca ggctggcgct gtaggagcgc cgcgggtcag atcggctcgg tatccgggtc
     3781 gggagggatg gggatggtgt cgggccgcgg ggtgggagga ccgaccagct cgaaggtcac
     3841 cggctccgtg aggtcgccac ccgagagggt gagccgccgg ttcctcacct tcaggcggta
     3901 gttcacccac tcacctccga gcgcgagcgc gagactgtcg cccacgatgc gccagcgcac
     3961 cgtctccgcg ccgtagctcg cgctgctgtc ggggcggacg atcaccgtcc gcggtcccgg
     4021 tttcttgtcg ccctgcttca ggtcgaactt ccaggtgccg aagatggcgg gcgcctgagc
     4081 ctccgcgctc cccggcaccg cccacgcgag tcctgccgcc agcatccagc caagcctcac
     4141 cggtcctcca cgaaagacga aggcgtcgcc gatcccggcc gtacactaaa cgcgggccca
     4201 gcggttgtca cctatcggcg gacggcctgc gccggggcat cgggcagaaa ggtgcgccgc
     4261 aggggcgaat gacggattgt gctgccgacc cgtgcgttgc tgataggcga caccgccacc
     4321 cctggaaccg cgcgacaaca ttcaccccac ggtccggagc ccaccatgac gagcccgatt
     4381 cactcacccg tccacccccg ggtcctcggc gctttagccg tgctggccgt ggcaggaggc
     4441 ttgggttgcc aggaaccccc gaccgcggcg ccggcccacg aaaccgcact gcacgaggac
     4501 cacagcggcc ccggctcgag tggccccgac ctgcatagcc agaacctgaa g
//
LOCUS       DASUYN010000276         2231 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1852803, whole genome shotgun sequence.
ACCESSION   DASUYN010000276 DASUYN010000000
VERSION     DASUYN010000276.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2231)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2231)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2231
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1852803"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1199)
                     /locus_tag="VF061_05505"
     CDS             complement(<1..1199)
                     /locus_tag="VF061_05505"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX6668990.1"
                     /translation="MSDDPHEAYRELQREYLGELPAALAELRQHIEAFRRGESVVPAL
                     KTGFHRLAGSGGSYGFPEISELARAAEQIVLASPPPDEADRLDEAVRRLEAVLTVARA
                     TVSAGVDVTGTGLRAVLVLPPGPDRERITEALVAAGFAVDLRVRKEDPLVVTGDKRVD
                     LLIIGTAAGEGDPSAVASAWTSRRSTRPRAVVLIETLRAVDRLRAAAAGVDAVFPAER
                     IAADLPRYAQALARTGPPPSTVLLLDGDPDRSSRVVAALEQSNIRVVRSPSARAAPEL
                     LDREVPDLLVVAPRLADGEGFAVLRHVRDDPKFHLLPTVMIGAPDVATQIEALRAGAD
                     DFVPDTAAPELLLQAVITRAERGRRLRELLLRDELTGLLNQGALMGELEYAVEYARRH
                     GGPIAFVL"
     gene            complement(1196..1876)
                     /locus_tag="VF061_05510"
     CDS             complement(1196..1876)
                     /locus_tag="VF061_05510"
                     /inference="COORDINATES: protein motif:HMM:NF014080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX6668991.1"
                     /translation="MPDLTRFGFTPTEGLVYQVLLTGGPGTGYAIARLAGLARANAYS
                     ALEGLVAKGAARVDGGRPKRYRPESPAALIARISNDHGQALERLSRELESVAVPETET
                     LVELVSSRALLQLMTHDVARASKSVGLLAPPDAYPLLAPALRRPYAAGVPLQLLATGP
                     VDLGFAPVEPIAPDARPWPGMPVILVADGRSAILAARNGSEVRGHWSTAPAFVAGARL
                     ALERFGTP"
     gene            complement(1921..>2231)
                     /locus_tag="VF061_05515"
     CDS             complement(1921..>2231)
                     /locus_tag="VF061_05515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668992.1"
                     /translation="DAKGYPKDVPLALHYIELLARMGALEWAPVATRVLGRLLKDCDE
                     SGVWSPKNLRSQPKALNKITYHYYPLHLDAKTTEGREVDITFRLALIAKLLGWELAYA
                     "
BASE COUNT          311 a          798 c          824 g          298 t
ORIGIN      
        1 agcacgaagg cgatcggccc gccgtggcgg cgggcgtact ccaccgcgta ttccagctcc
       61 cccatcaggg cgccctggtt cagcaggccg gtcagctcgt cgcgcaggag caactcgcgg
      121 aggcggcggc cccgctccgc ccgggtgatc accgcctgga gcagcagctc cggcgcggcc
      181 gtgtcgggca cgaagtcatc ggcgccggcg cgcagcgcct cgatctgggt cgcgacatcc
      241 ggcgccccga tcatcaccgt cggcagcagg tgaaacttcg ggtcgtcgcg cacgtggcgg
      301 agcacggcga acccctcgcc gtcggcgagc cggggcgcga cgaccaggag atccggcacc
      361 tcccggtcga gcagctcggg cgccgcccgg gccgatgggc ttcgcaccac ccggatgttc
      421 gactgctcca gcgcggcgac gacgcggctg gagcggtcgg ggtcaccgtc gagcagcagg
      481 acagtggatg gcggcgggcc ggtgcgggcc agggcttggg catagcgcgg caggtcggcg
      541 gcgatccgct cggcggggaa gaccgcgtcc acgcccgctg ccgccgcgcg caggcgatcg
      601 accgccctca aggtctcgat caggacgacc gcgcgcggcc gggtcgagcg gcggctggtc
      661 caggccgatg ctaccgccga cggatccccc tccccggcgg cggtgccaat gatcagcagg
      721 tccacacgct tgtcgccggt cacgacgagc gggtcttcct tccgaacgcg gaggtccacc
      781 gcgaaccccg cggccaccag ggcctcggta atccgctcgc ggtcggggcc cggaggcagc
      841 accagcacgg ccctgaggcc ggtaccggtc acgtccaccc ctgccgagac cgtcgcgcgg
      901 gcgacggtca gcacggcttc gagccgccgc accgcctcgt cgaggcggtc ggcctcgtcc
      961 ggcggtggcg aggcgagcac gatctgctcc gccgcgcggg cgagctcgct gatctcgggg
     1021 aaaccgtagg agccgcccga gcccgcgagc cggtgaaagc cggtcttgag cgccgggacg
     1081 acgctctccc cccggcggaa cgcctcgatg tgctggcgga gctcggccag cgcggccggc
     1141 agctccccca ggtactcgcg ctggagctcg cggtaggctt cgtgcgggtc gtcgctcatg
     1201 gcgtcccgaa tcgctcgagt gctagccgcg ccccggccac gaacgcggga gcggtgctcc
     1261 agtgcccgcg gacctcgctc ccgttccgcg cggccaggat cgcgctgcgg ccgtccgcga
     1321 ccaggatgac gggcatcccc ggccacgggc gggcatccgg ggcgatcggc tccaccggcg
     1381 cgaagccgag gtccaccggc ccggtcgcca ggagctggag aggaaccccg gcggcgtaag
     1441 gtcggcggag cgcaggggcg agcagcgggt aggcgtccgg cggcgccagc agccccacgg
     1501 acttgctcgc ccgggcgaca tcgtgggtca tgagctggag cagcgcgcgg ctggagacca
     1561 gctcgaccag cgtctcggtc tccggcacgg cgaccgattc gagttcccgg ctcaggcgct
     1621 ccagcgcctg cccatggtcg ttggagatcc gggcgatcaa ggccgcaggc gactccggcc
     1681 gataccgctt cggccgccct ccgtccaccc gggcggcgcc cttggccacc aggccttcga
     1741 gggcactgta cgcgttcgcc cgcgccaggc cggcgagccg ggcgatggcg tagccggtgc
     1801 cggggccacc ggtgaggagg acctggtaga cgaggccttc ggtaggggtg aagccgaatc
     1861 gggtgaggtc gggcacgacg tagtatgggg tactacgacc ctgtatgtaa agctctccgc
     1921 ttacgcatag gccagctccc aacctagcag cttggcgatg agtgccagcc ggaaggtgat
     1981 gtccacctcc cgtccctcgg tcgtcttcgc gtccaggtgg agcgggtagt agtggtaggt
     2041 gatcttgttc agcgccttgg gctgggagcg caggttcttg gggctccaga cgccggattc
     2101 gtcgcagtcc ttgagcaggc gacccagcac tcgcgtggcg accggcgccc actccagggc
     2161 ccccatccgg gcgagcagct cgatgtagtg cagcgccaag gggacatcct tggggtagcc
     2221 cttggcgtcc g
//
LOCUS       DASUYN010000277         2124 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1411561, whole genome shotgun sequence.
ACCESSION   DASUYN010000277 DASUYN010000000
VERSION     DASUYN010000277.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2124)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2124)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2124
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1411561"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..705)
                     /locus_tag="VF061_05520"
     CDS             complement(<1..705)
                     /locus_tag="VF061_05520"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX6668993.1"
                     /translation="MIALPCLLYSMDLTVLNLAVPSLSAALAPSSSQLLWIVDIYGFL
                     VAGSLITMGTLGDRIGRRRLLLIGAAAFGVASVLAAFSTSAEMLIATRALLGIAGATL
                     APSTLSLIRNMVLDPGQRTFAIGVWVASYSAGGAIGPLVGGALLEYFWWGSVFLVGVP
                     VMALLLALGPSLLPEFQDPAAGRLDLLSAALSLVAVLAVIYGLKQVAQDGMGWLAALT
                     IVAGLTVGAVFLRRQRT"
     gene            complement(1010..1141)
                     /locus_tag="VF061_05525"
     CDS             complement(1010..1141)
                     /locus_tag="VF061_05525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6668994.1"
                     /translation="MIDDLARAAAAGVDEVIWDLNIIGLDPQRQVEALEALASTIKA"
     gene            complement(1244..1639)
                     /locus_tag="VF061_05530"
     CDS             complement(1244..1639)
                     /locus_tag="VF061_05530"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX6668995.1"
                     /translation="MRSTPESGPRSATTGDTGASIVLSAGRVVAGIGQGWLPEEFAAV
                     GVLLTRRGAGFEEHLAAMRACWAPDPVEHHGPRYQIPRSKIGPKPFNGHLPVLIGGVA
                     RPAVERAARLGDGITLASRDWDSTLTQID"
     gene            complement(1623..>2124)
                     /locus_tag="VF061_05535"
     CDS             complement(1623..>2124)
                     /locus_tag="VF061_05535"
                     /inference="COORDINATES: protein motif:HMM:NF014999.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF234 domain-containing protein"
                     /protein_id="HEX6668996.1"
                     /translation="YLRFWFRFVLPNRAQLEHGGSVERVYREAIAPALDHFVSKPAFE
                     DICRAWVLDRVNAGDWSGVDRVGAWWGPMLDPTPDQPRRQIEGEVEVVAVAGKRVVVA
                     GEAKWTREPIGFGVLNRLRQVARHIPGADAETELVLLGRAFDARLVEAADHERVTLIA
                     PDALYA"
BASE COUNT          354 a          737 c          742 g          291 t
ORIGIN      
        1 ggttcgctgc cggcgcagga acaccgcgcc gacggtcagg ccggccacga tggtcagcgc
       61 tgccagccag cccatgccgt cctgggcgac ctgcttgagc ccgtagatca ccgccagcac
      121 ggcgaccagc gacagggccg cgctgagcag gtccaaccga cccgccgcgg gatcctggaa
      181 ctcgggaagc agcgatggtc caagcgccag cagcagcgcc atcaccggca cacccaccag
      241 gaacaccgag ccccaccaga agtactccag cagcgctccg ccgaccagcg ggccgatcgc
      301 gccgccggcc gagtagctgg cgacccacac gccgatggcg aacgtgcgtt gccccgggtc
      361 gaggaccatg ttgcggatca gggatagggt cgagggcgcc agggtcgccc cggcgatccc
      421 gagcagcgcg cgggtcgcaa tcagcatctc cgcgctggtt gagaacgcgg ccagcaccga
      481 agcgaccccg aacgcggccg cgccgatcag cagcagccgc ctgcggccga tgcggtcgcc
      541 cagcgtgccc atcgtgatca gcgacccggc gaccaggaag ccgtagatgt ccacgatcca
      601 cagcagttgg gagctgctgg gtgcgagggc ggcgctgagg gaaggcaccg ccaggttcag
      661 cacggtcagg tccatggaat agagcaggca cggcagggcg atcacggcga gcccaagcca
      721 ctcgcgccgc cctgccctcg gtgtatcgac ggtcgtactc aagagagatc tccctgcccc
      781 agcggggcgg tcaaatttct tggctccgcg cttcgctccc cggaatcatg cgagccggac
      841 gccggcgcgg gcatcacccg aaagggggag atgcggtttg cgtgtccgta cctcgtcgtt
      901 ctatagatca ggcgttcgat gcgagtgtac ggctgttcaa tcggcctcgg cagccggtct
      961 caccccgggg agctccacgg cgacgagggg gactcggcgc cgcgtcggct catgccttga
     1021 tcgttgaggc gagggcttcg agggcctcga cctggcgctg gggatcgagg ccaatgatat
     1081 tcaggtccca gatgacctcg tcgacaccgg ccgccgcggc gcgggcgagg tcgtcgatca
     1141 cagatggctc ggtccaggca gtcggcggtg tcgggtgttg atggttggcc agcatcggac
     1201 cggcccgcat cacgatgggg ccggtaccgc cagcgccgcg gtatcagtcg atctgggtga
     1261 gggtactgtc ccagtcccgg gacgcaaggg tgatgccgtc gccgagacgg gctgcccgct
     1321 ccacggcggg ccgggctacg ccgccgatga gcactggcag gtggccgttg aagggcttcg
     1381 ggccgatctt cgagcggggt atctggtagc ggggaccgtg atgctcgacc gggtccggcg
     1441 cccagcatgc ccgcatagcg gcgaggtgtt cctcgaaacc ggcgccgcga cgggtcagca
     1501 gcacgccaac cgcggcgaac tcctcgggca gccagccctg cccgatgccg gcgacgaccc
     1561 gaccggccga gaggacgatg ctcgcgccgg tgtcgccggt ggtcgcggac ctcggtccgg
     1621 actcaggcgt agagcgcatc gggcgcgatc agcgtgacgc gctcgtggtc cgcggcttcc
     1681 accagccgcg catcgaaggc acgccccagc aggaccagct cggtctccgc gtcggctccg
     1741 gggatgtgcc gtgcgacttg gcgcaggcgg ttgagcacgc cgaagccgat cggctcacgc
     1801 gtccacttcg cctcgccggc caccaccacc cgcttgccgg ccacagcaac gacctcgacc
     1861 tcgccctcga tctgacgccg gggttgatcc ggggtcgggt cgagcattgg tccccaccag
     1921 gcgccaacgc gatcgacgcc agaccagtcc ccggcgttca cgcggtcgag aacccaggcg
     1981 cggcagatgt cttcaaacgc tggcttcgag acgaagtgat cgagcgcggg cgctatcgcc
     2041 tcgcgataca cgcgctccac gctgccgccg tgctcgagct gggcccgatt cgggagcacg
     2101 aaacggaacc agaagcggag gtac
//
LOCUS       DASUYN010000278         3223 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1192769, whole genome shotgun sequence.
ACCESSION   DASUYN010000278 DASUYN010000000
VERSION     DASUYN010000278.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3223)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3223)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3223
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1192769"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(38..1075)
                     /locus_tag="VF061_05540"
     CDS             complement(38..1075)
                     /locus_tag="VF061_05540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HEX6668997.1"
                     /translation="MDGTIVYVLVIVLIALIFDFINGFHDSANSIATVVSTRVLTPGV
                     AVFWAAFFNFIAAFVVGTAVAKTIGKGLIDIAVVDPSVILGALIGAIVWDLITWWGGL
                     PSSSSHALLGGYAGAAIAKAGFGALIPGGWTLPLLFIVVSPVLGMAISLGLTVGLAWP
                     LRNASPGPVDRVFRRLQLLSAGLYSLSHGANDAQKTMGIIVSLLVATQTHFEHVPGWL
                     RHFYLPTADHVPLWIVLAAHMAIALGTAFGGWRIVKTMGTRITKLRPFGGFCAETAGG
                     IAVLLATGLGVPVSTTHTITGAIVGVGAAQRVSAVRWGVAGRIVWAWILTIPMSAAIA
                     AVAYLALRPLG"
     gene            complement(1078..1698)
                     /locus_tag="VF061_05545"
     CDS             complement(1078..1698)
                     /locus_tag="VF061_05545"
                     /inference="COORDINATES: protein motif:HMM:NF013982.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF47 family protein"
                     /protein_id="HEX6668998.1"
                     /translation="MRLLPRDEKFFDLFSAVATFTVDAAKLLQELLRADPQRRTAIVD
                     QIKRLEHQADQVTHEVVTRLDRVFITPLDREDIHLLASRLDDVIDLIDGTARRLLMFR
                     AGKSPEGAVLIADVIGKAVAELQVAVRALEKNKGGTVLAACVQVKRMEEEGDSLYHEW
                     LGRLFEGEPSPLEVIKWKEIYDNLEKTLDFIEDAANVLESISIKHA"
     gene            1802..>3223
                     /locus_tag="VF061_05550"
     CDS             1802..>3223
                     /locus_tag="VF061_05550"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEX6668999.1"
                     /translation="MAPPDASERLAAVARTALLDTPPEEGFDRLTRMAARLLGAPVSL
                     ITLVTDDRQFFKSATGLPEPLASRRSAPLSHSFCRQVAVSGEPLVVEDTRRHPLLRTN
                     PAVREFGWIAYAGVPLVTRAGWVVGSFAVVDGMPRLWSERDVALLRDLAACAASEIEL
                     RLQETREPGVRPHGNGGPRTPEVFEDTGIPMGIASPEGRWIRVNRALAELLGAREDEL
                     VGSLAEGIIHPDDRPVQREALRLLLAGECPTYTSEHRCLRRNGEPTWGLVTVTLVADA
                     EHRPRHLLYAVQDISDRKRTEAELRESEERYRLVVQATRHVAWDWDLTTDRVVWGEGL
                     EGMFGHAPPTSVTSAAWWYEHIHADDRERVVAGIEAALERGDRAWAQEYRFRRADGRY
                     ARVTARGSVVRERSGEAVRVVGAMADVSREREGEAALRAEVADHKRAGSLAAGQSRLL
                     ERIAAGEHLPSVLEGIVRFAEEHG"
BASE COUNT          496 a         1109 c         1169 g          449 t
ORIGIN      
        1 ctggcggact acgcggaggc ggtggaagga aagcgtctca cccgagcggc ctgagcgcga
       61 gataggcgac ggccgcgatc gcggcgctca tcgggatggt gaggatccac gcccacacga
      121 tccgtcccgc caccccccag cgcaccgccg agacccgctg ggccgcgccg accccgacga
      181 tcgcgcccgt gatcgtatgc gtggtgctca ccggtactcc caggcccgtg gccagcagca
      241 cggcgatccc gccggcggtc tccgcgcaga accctccgaa cggccgcagc ttggtgatcc
      301 tggtccccat cgtcttcacg atgcgccagc cgccgaaggc ggtgcccagg gcgatggcca
      361 tgtgggcggc aagcacgatc cagaggggga cgtggtccgc cgtcggcagg tagaagtggc
      421 gcagccaccc gggcacatgc tcgaagtgcg tctgggtcgc caccaggagg ctcacgatga
      481 tgcccatcgt cttctgggcg tcgttggcgc catgggagag tgagtagagg ccggcggaga
      541 ggagctgcag ccggcggaac acgcggtcca ccggcccggg cgaggcgttc cgcagcggcc
      601 aggcgagacc caccgtcagc cccagcgaga tggccatccc caggaccggg gagacgacga
      661 tgaagaggag cggtagcgtc cacccacccg ggatgagggc gccgaagccg gccttggcga
      721 tggccgcgcc ggcatagccg cccagcaggg cgtgggacga ggagctgggg aggccgcccc
      781 accaggtgat caggtcccac acgatcgccc cgatcaatgc gccgaggatg acgctggggt
      841 ccaccaccgc gatgtcgatc aggcccttgc cgatggtctt ggcgaccgcg gtgccgacca
      901 cgaatgccgc gatgaagttg aagaacgcgg cccagaagac cgccacgccg ggtgtgagga
      961 cccgggtgga gaccacggtg gcgatcgagt tggcgctgtc gtgaaagccg ttgatgaagt
     1021 cgaagatgag cgcgatgagc acgatcacca ggacgtagac gatggtcccg tccatgctca
     1081 ggcgtgcttg atggagatgg actccaggac gttggccgcg tcctcgatga agtcgagcgt
     1141 cttctccagg ttgtcgtaga tctccttcca cttgatgact tccagcggcg aaggctcccc
     1201 ctcgaacagc cgcccgagcc actcgtgata gagggagtcc ccctcctcct ccatccgctt
     1261 cacctgcacg cacgcggcca ggacggtccc gcccttgttc ttctccaggg cccggaccgc
     1321 gacctgcagc tcggccaccg ccttgccgat gacgtcggcg atcagcacgg ccccctcggg
     1381 cgacttgccg gcgcggaaca tcagcagccg gcgggcggtg ccgtcgatca ggtcgatgac
     1441 gtcgtccagc ctggaggcga ggaggtggat gtcctcccgg tcgagcggcg tgatgaagac
     1501 ccggtcgagc cgggtgacca cctcgtgggt cacctggtcg gcctggtgct ccagccgctt
     1561 gatctggtcc acgatcgcgg tccgccgctg ggggtccgcc cggagcagct cctgcagcag
     1621 tttcgccgcg tcgaccgtga aggtggcgac ggcgctgaag agatcgaaga acttctcgtc
     1681 gcgaggaagg agccgcatgt gtcacgtcca ggtaacggaa gcgagcggtc gggaagatag
     1741 cactggccct gccggcgagc tatcaggccg gcgatttcgg agctaatttc cctccgccag
     1801 tatggccccc ccagacgcca gcgagcggct tgccgccgtc gccaggaccg cgctcctgga
     1861 cacgccaccc gaagagggct tcgaccggct gacccggatg gcggcccggc tgctcggcgc
     1921 gcccgtctcc ctcatcaccc tcgtcaccga cgatcggcaa ttcttcaaga gcgccacggg
     1981 cttgcccgag cccctggcga gccgccggag cgcgccgctg agccactcgt tctgccgcca
     2041 ggtggcggtc tcgggcgagc ccttggtggt ggaggacacc cgccgccacc cgctgctccg
     2101 taccaacccg gcggtccgcg agttcggctg gatcgcctat gccggggtcc ccctggtcac
     2161 gcgggccggc tgggtggtgg gctcgttcgc ggtggtggac gggatgcccc ggctctggtc
     2221 ggagcgggac gtggcgctgc tccgcgacct ggccgcctgt gccgcctccg agatcgagct
     2281 ccggctccag gagactcggg agccaggcgt caggccgcac ggcaacggcg gcccccggac
     2341 gccggaggta ttcgaggaca ccggcatccc gatgggtatc gcttcgccgg aggggcgctg
     2401 gatccgggtg aaccgcgccc tggccgagct gctcggcgcc cgggaggacg agctggtcgg
     2461 ctccctggcc gaagggatca tccatcccga cgaccggccg gtgcagcggg aggcgctccg
     2521 gctcctcctg gcgggcgaat gtcccaccta cacctcggag caccgctgcc tgcgccgcaa
     2581 cggcgagccc acctgggggc tcgtcaccgt cacgctggtg gccgatgcgg agcaccgccc
     2641 gcgccacctg ctctacgccg tccaggacat cagcgaccgc aagcggaccg aagccgagct
     2701 ccgggagagc gaggagcgct accggctggt ggtgcaggcc acccggcacg tcgcctggga
     2761 ctgggacctg acgaccgatc gggtcgtctg gggtgaaggc ctggaaggca tgttcggcca
     2821 cgcccccccg acctcggtga ccagtgccgc ctggtggtac gagcacatcc atgccgacga
     2881 ccgcgagcgg gtcgtcgccg gtatcgaggc ggcgctcgag cgcggagacc gcgcctgggc
     2941 gcaggagtac cgcttccgcc gcgccgacgg ccgctatgcc cgggtgaccg cgcggggctc
     3001 ggtggtgcgg gagcggtcgg gagaagcggt gcgggtggtg ggcgccatgg ccgacgtgag
     3061 ccgggagcgc gagggcgagg ccgcgctgcg cgccgaggtc gccgaccaca agcgtgcggg
     3121 gtcgttggcc gcgggccaga gccgtctgct ggagcggatc gccgccggtg agcacctgcc
     3181 gagcgtgctg gaggggatcg tccgattcgc ggaggagcac ggc
//
LOCUS       DASUYN010000279         3470 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_531518, whole genome shotgun sequence.
ACCESSION   DASUYN010000279 DASUYN010000000
VERSION     DASUYN010000279.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3470)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3470)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3470
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_531518"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1092)
                     /locus_tag="VF061_05555"
     CDS             complement(<1..1092)
                     /locus_tag="VF061_05555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669000.1"
                     /translation="MTNPLATADFFALEAGECLDRLELLSRRDDAPPAEDFLRASRVL
                     RGSALMASQQAIARAAGGLESVARALREGRREWDAECREQVAQAIEEFRLLVRRVREW
                     DDGDTLRAGRLGLSLEALAGRTTAEPGERRPEPGDVNAGVRAFVAREGALIASALDRA
                     ARALQVSPGDREPLYTVIRRMQSLRGLAELGELTPLPEILDGIELAVGDLTRLFAPPP
                     GVHEVMAAAAVALTRLSRDIAERGRPDAEAEEARAFTELLLRAFAVERDVVPIETLYV
                     EGDTSPVTPPPGQPQFEPPAPLGPLELVSHGEHLCQSADLIARSSSATERDLRLYHLI
                     GALRSASLPGPDPVAGALAVFARSTREALA"
     gene            complement(1106..1831)
                     /locus_tag="VF061_05560"
     CDS             complement(1106..1831)
                     /locus_tag="VF061_05560"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033856 - pyridoxine 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HEX6669001.1"
                     /translation="MTATIRLYINVDHVATVRQARRTDEPDPVEAALLCEAGGADGIT
                     AHLREDRRHIQDHDLERLRPAVKVLNVELATNPDILAFTCRLRPYQATLVPERREEIT
                     TEGGLDLVRSGPRLRDTIRRLDEAGIRVSLFVDPDPATLDAAKDLGVPAVELHTGRYA
                     NTWRRGDEALQELRRAARHAADMGLFVHAGHGLTYQNVEPVAAIPEIEELNIGHSVVS
                     RSITTGMQVAVQEMARLVKGTRL"
     gene            1891..2358
                     /locus_tag="VF061_05565"
     CDS             1891..2358
                     /locus_tag="VF061_05565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669002.1"
                     /translation="MIKARPLVLAVVLAACGGAVPSSTVTPTTSARGAVDGFMQAVAD
                     SNLTQMAGLWGTAAGPAGRTRQPADWEQRITVMQAYLQNESHRIVSDAPAGSDARHSV
                     QVEIRRGLCTWSIPFTTIRLADGSWIVNQVDLTAAGNPARPCVPGQDTASSGE"
     gene            complement(2391..2786)
                     /gene="mce"
                     /locus_tag="VF061_05570"
     CDS             complement(2391..2786)
                     /gene="mce"
                     /locus_tag="VF061_05570"
                     /EC_number="5.1.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA epimerase"
                     /protein_id="HEX6669003.1"
                     /translation="MAASPRIAHVGIAVPDIETALAFYRDVLGLEPHPPEVADGATIV
                     ALPFGESEVELLAPRDADGPIARFLARRGPGIHHVCYRVPDLDAALAACRAAGYRLID
                     ETPRTGAGGRRIAFVHPKATAGILLELTE"
     gene            2842..3180
                     /gene="trxA"
                     /locus_tag="VF061_05575"
     CDS             2842..3180
                     /gene="trxA"
                     /locus_tag="VF061_05575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HEX6669004.1"
                     /translation="MAATNHQTVHITDASFTAEIEQANGLVLVDFWATWCGPCQIVSP
                     ILEQLAGEYLGRAKVTKLDVDANQRTAMRFNVRSIPSILFFKNGQHVDTVIGAVPKST
                     LEGKIKQHLA"
     gene            3177..>3470
                     /locus_tag="VF061_05580"
     CDS             3177..>3470
                     /locus_tag="VF061_05580"
                     /inference="COORDINATES: protein motif:HMM:NF012799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HEX6669005.1"
                     /translation="MSAAAGRRGGGSGGTLYVVATPLGNLGDLSPRAAETLRQASVVA
                     AEDTRRTRGLLSHLGAAPTLLSFHAHSGEHRVETLLEVLAEGRDVALVTDAGTP"
BASE COUNT          510 a         1236 c         1232 g          492 t
ORIGIN      
        1 cgcgagcgct tcgcgggtgg agcgggcgaa caccgcgagc gccccggcca cgggatcggg
       61 ccccgggagg ctcgcgctcc ggagcgcgcc gatgagatgg tacagccgca ggtcgcgctc
      121 tgtcgcggag gaggagcgag cgatcaggtc ggcgctctgg cagaggtgct cgccgtggct
      181 gaccagctcc agcggaccga gcggcgccgg cggctcgaac tgcggctggc cgggcggtgg
      241 cgtcacggga gaggtgtcgc cctcgacata cagcgtctcg atcggcacca cgtcccgctc
      301 caccgcgaag gcccggagca gcagctcggt gaacgcccgc gcctcttcgg cttcggcgtc
      361 ggggcgcccg cgctcggcga tgtcgcgcga gagccgggtg agcgcaacgg ccgccgccgc
      421 catcacctcg tggacgcccg gcggtggcgc gaagagccgc gtcaggtcgc ccacggccag
      481 ctcgataccg tcgagaatct cgggcagggg ggtcagctcg cccagctccg cgagcccgcg
      541 gagcgactgc atccgccgga tcacggtata gagcggctcg cggtctcccg gggagacctg
      601 gagcgcccgg gcggcgcggt ccagggcgct cgcgatgagc gcgccttccc gcgcgacgaa
      661 cgcgcggacg ccggcattga cgtcgccggg ctccggtcgc cgctcgcccg gttccgcggt
      721 ggtgcgcccg gccagcgcct cgagcgagag gccgaggcgc ccggcacgca gcgtgtcgcc
      781 gtcgtcccat tcgcgcaccc gccgcaccag caggcggaac tcctcgatcg cctgcgccac
      841 ctgctcccgg cactccgcgt cccattcgcg gcgcccctcg cgcagcgccc gggcgacgga
      901 ctcgagcccg ccggccgcgc gcgcgatcgc ctgctgcgag gccatcagcg ccgatccgcg
      961 cagcacccgg ctcgcgcgga ggaagtcctc cgccggtggc gcgtcgtcac gccgcgagag
     1021 cagctcgagt cggtcgagac actcgccggc ctcgagcgcg aagaagtccg ccgtcgccag
     1081 gggattggtc atcgcagata aagtatcaga gccgggtgcc cttcaccaag cgcgccattt
     1141 cctgcacggc gacctgcatg cccgtggtga tggaccggct gaccacgctg tgtccgatgt
     1201 tgagctcctc gatctccgga atggcggcga ccggctccac gttctggtag gtgagcccgt
     1261 ggcccgcgtg gacgaagagc cccatgtcgg ccgcgtgccg cgcggcgcgt cggagctcct
     1321 gcagcgcctc gtcgcctcgg cgccaggtgt tggcgtagcg cccggtgtgc agctccaccg
     1381 cgggcacccc gaggtccttc gccgcgtcga gggtggccgg gtcggggtcc acgaagagac
     1441 tgacccgaat gccggcctcg tccagccggc ggatggtgtc gcggagccgc ggacccgagc
     1501 ggaccaggtc gagtccgcct tcggtggtga tctcctcgcg gcgctcgggc accagggtgg
     1561 cctggtaggg acgcagccga caggtgaagg cgaggatgtc cgggttggtc gccagctcga
     1621 cgttcagcac cttcaccgcg gggcggagcc gctccaggtc gtgatcctgg atatggcggc
     1681 gatcctcccg caggtgcgcg gtgatgccgt cggcgccgcc cgcctcgcac agcagtgcgg
     1741 cctcgaccgg gtcgggctcg tcggtgcgcc gcgcctgccg caccgtggcc acatggtcca
     1801 cgttgatgta cagccgtatc gtcgccgtca ttgcccgggg tgtggcaggg gattaacttc
     1861 gcccgctaac atatgccagg tgagacactt gtgatcaagg cgcgcccgct ggtcctcgcc
     1921 gtcgtcctcg ccgcatgcgg cggcgctgtt ccttcctcca cggtgacgcc caccaccagc
     1981 gcccggggtg cggtggatgg gttcatgcaa gcggtcgccg acagcaatct cacccagatg
     2041 gccggcctgt ggggcaccgc cgcgggaccg gcgggccgga cccgacagcc ggccgactgg
     2101 gagcagcgga tcacggtgat gcaggcctac ctgcagaacg agtcccaccg catcgtctcg
     2161 gacgcgcccg cgggaagcga cgctcgtcat tcggtgcagg tcgagatccg gcgcggactc
     2221 tgcacctggt ccatcccgtt caccacgatc aggctcgccg acgggtcctg gatcgtgaat
     2281 caggtggacc tgacggccgc gggaaacccc gcgcggccct gtgtccccgg tcaggacacc
     2341 gccagctccg gagagtgagg cgggaacctt cggcatctcc ggttgttatc ttactcggtc
     2401 agctcgagca gtatcccggc cgtcgccttc ggatgcacga aggcgatgcg gcggccgccg
     2461 gcgccggtgc gcggcgtctc gtcgatcagg cgatatccgg cggcccggca cgcggcgagc
     2521 gccgcgtcga gatccggcac ccggtagcag acgtgatgga tgcccggccc gcgccgggcg
     2581 aggaacctgg cgatgggtcc atcggcgtcc cgaggagcca gcagctccac ctcggattca
     2641 ccgaagggca gggcaacgat ggtggcgccg tcggccacct cgggcggatg cggctcgagt
     2701 ccgagcacat cacgatagaa ggcgagcgcc gtctcgatgt ccggcacggc gatcccgaca
     2761 tgggcgatgc ggggggaagc cgccacgcgg tgcctccgag cgaaattgga atgcagggtt
     2821 caactccggg agaataacat catggccgcg accaaccacc agaccgttca catcaccgac
     2881 gcctcgttca ctgccgagat cgagcaggcg aacggcctcg tcctggtaga cttctgggcg
     2941 acgtggtgcg gtccgtgcca aatcgtctcg ccgatcctcg agcagctcgc cggcgagtac
     3001 ctgggccgcg ccaaggtgac caagctcgac gtggatgcga accagcggac ggcgatgcgc
     3061 ttcaacgtgc gatccatccc cagcatcctg ttcttcaaga acggccagca tgtggacacc
     3121 gtcatcggcg cggtgcccaa gtccacgctt gaagggaaga tcaagcagca cctcgcgtga
     3181 gcgcggccgc ggggcgacgc ggtggcgggt ccggggggac cctgtacgtc gtcgccacgc
     3241 cgctcggcaa tctcggggac ctctcccccc gcgccgccga aacattgcga caggcctccg
     3301 tggtggccgc agaggatacg cggcgcaccc gaggcctgtt gagccatctc ggcgcggctc
     3361 ccaccctcct cagcttccat gcccattccg gcgagcaccg ggtggagacc ctgctcgagg
     3421 ttctggcaga agggcgcgac gtcgccctgg tgaccgacgc aggcacccca
//
LOCUS       DASUYN010000280         4396 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1412887, whole genome shotgun sequence.
ACCESSION   DASUYN010000280 DASUYN010000000
VERSION     DASUYN010000280.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4396)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4396)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4396
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1412887"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..292)
                     /locus_tag="VF061_05585"
     CDS             complement(<1..292)
                     /locus_tag="VF061_05585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HEX6669006.1"
                     /translation="MSAIEELITELARLPGIGRKTAQRLTFHLLQQPPEMVGRLASAL
                     VAVAERVRPCRECGNLTEDQPCAVCADPRRDGTVLCVVEDASAVALVDRSTDF"
     gene            complement(296..604)
                     /locus_tag="VF061_05590"
     CDS             complement(296..604)
                     /locus_tag="VF061_05590"
                     /inference="COORDINATES: protein motif:HMM:TIGR00103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HEX6669007.1"
                     /translation="MADLQQLFQLGQQVQGRLQQLQSELAGRTIETSSGGGMVRVTAD
                     GRGMVRSVAIEPTVFQTHDAEFLGDLVLAAVAEAQRRAGELLQAEMRKVPTLPFTPPL
                     "
     gene            complement(669..2336)
                     /gene="dnaX"
                     /locus_tag="VF061_05595"
     CDS             complement(669..2336)
                     /gene="dnaX"
                     /locus_tag="VF061_05595"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:NF004046.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HEX6669008.1"
                     /translation="MLALARRYRPKRFADLLVQDHVAAVLRGAVARERVGHGYLLTGP
                     RGVGKTTAARILAMALNCPNRQPSGDPCGECESCLRIWNGAASLDVVEIDAASNRGVD
                     DARDLRERAMYAASQAGHHKVYIVDEAHMLTREAWNALLKILEEPPPGVVFVFATTEP
                     QKIAATAAPVLSRLQRFDFRRIGPAAIRQRLRQVLDAEGIAADEDALTLIARQADGGM
                     RDALSVLDQCLSFGDGAVTAARVREVLGLVEDELYAEALGLVADQRPEGVFPLVDRLV
                     DAGADLTEFIGGAGELLRALLMLQLGTAPDGLTEAVRQSLERYRDRLEPGDVVRMLRL
                     LTDSEALVRRSANPRLVVETLLLRWAMMDRTVDLREVLEGGEAGGRRAAPSAAPVPPA
                     PSPKALGRQSPPETRILRDAAPAAPAVDPAPAARGDTTGDLAQAWPDIVAEVRARSRF
                     LGEALAGTIPGAVEGSTLPLVLAESNPLFAERIQAEASAVEEVVRRHTGQALRILVTV
                     GEGEGAPATKPRVLTESSLRADRLRSFRARDPALDTAADALDLEIVD"
     gene            complement(2518..3453)
                     /locus_tag="VF061_05600"
     CDS             complement(2518..3453)
                     /locus_tag="VF061_05600"
                     /inference="COORDINATES: protein motif:HMM:NF015587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HEX6669009.1"
                     /translation="MSTVRPGGWHRTPAGFIRRTLQAADEYNLPFLASALTFDALLAA
                     IPFVLLLLIGLTHLAQALEGNSTVDAAALFHRFFPPHVSTPGQDPFGVIEALLVRVSQ
                     NRGQISLYAIPAFVWFSTRLFAGIRISLNEIYDISARPGRQRHFLLSLLYAKVRDVGM
                     VVATVVLFLANTLLTTGLALLQNRGVTQVPELSFFLSTLGRLLGELLAFSFSVSLFYL
                     TYAYASPRRLPWRTVLLAATFTAALFELAKRLYGLYLANFASFEGPSGDANIGAAVLL
                     ILWIHYTSVVFLLGGVVAETWELRKMQQRQRALLG"
     gene            complement(3450..3848)
                     /locus_tag="VF061_05605"
     CDS             complement(3450..3848)
                     /locus_tag="VF061_05605"
                     /inference="COORDINATES: protein motif:HMM:NF024143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HEX6669010.1"
                     /translation="MRHKGREVVYVQRGDSSAKWLFWGAVLGAGLALMYAPRSGEETR
                     RGVQRRLWKLRAMTEEKLDELAQQFGGPRESLRDLDEEDFDEEELLESREPPSVRRTS
                     APSAREELERRLAEARARRRASGDLEEPLA"
     gene            complement(3857..>4396)
                     /locus_tag="VF061_05610"
     CDS             complement(3857..>4396)
                     /locus_tag="VF061_05610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase"
                     /protein_id="HEX6669011.1"
                     /translation="DGSIADVKLDLQALEALSRVAREQYGLAGAVQHGASTLPSNAFG
                     NFPRIETAEIHLATNFQNIVFDHPRLPEDLRRRIRSWLDENAASERKSGDTEEQFYYK
                     ARKKAIGPFKRDLWGLSEDIRTAIAGDLERTFAFLFEQLNVNGTEDHINRFVQAPLQH
                     HAALKPVLVAAADDPDAGE"
BASE COUNT          678 a         1543 c         1573 g          602 t
ORIGIN      
        1 tgaaatcggt ggagcggtcc accagggcga ccgcggacgc gtcctccacg acgcagagca
       61 cggtgccgtc gcgccgaggg tcggcgcaca cggcgcaggg ctggtcctcg gtcaggttgc
      121 cgcactcccg gcacgggcgc acccgctcgg ccacggcgac cagcgccgag gccagccggc
      181 cgaccatctc aggaggttgc tgcaacaggt ggaaagtgag acgctgagcc gtcttgcggc
      241 cgattccggg cagcctcgcc agctcggtga tcagctcctc gatggcactc accggtcaga
      301 gcggcggcgt gaacggcagc gtgggcacct tccgcatctc ggcctggagc agctcgcccg
      361 cgcgtcgctg ggcttcggcc accgcggcca gcaccaagtc gccgaggaac tccgcgtcgt
      421 gggtctggaa caccgtgggc tcgatcgcga ccgaacggac catcccgcgt ccgtcggcgg
      481 tcacgcggac catgccgccg cccgaggacg tctcgatggt ccgtcccgcc agctccgact
      541 gcagttgctg cagccggccc tggacctgct gaccgagctg aaagagctgc tggagatccg
      601 ccatgccttc cggtagtcct gccattggcg ccaatgctag gtagaggtgg aatcgattgc
      661 aacgacggtc agtccacgat ctccaaatct aacgcatcag ccgccgtgtc gagggcggga
      721 tccctggcgc ggaacgaccg cagacggtcg gcccggagcg aggattcggt gaggacccgc
      781 ggcttcgtcg ccggggcacc ctcgccctcg cccacggtca ccaggatgcg gagcgcctgg
      841 ccggtgtggc gccggacgac ctcctcgacc gcggaagcct cggcctgaat ccgttccgcg
      901 aacagcgggt tggattcggc caggaccagc gggagcgtcg agccctcgac cgcccctggg
      961 atcgttccgg ccagggcctc gcccaggaag cggctccggg cccgcacctc ggccacgatg
     1021 tcgggccagg cctgagcgag gtcgccggtc gtatctcctc gggccgccgg cgcgggatca
     1081 accgccggcg cggcgggcgc ggcgtcccgc aggatgcgag tctccggcgg actctgccga
     1141 ccaagggcct tgggagacgg cgccggcggg accggagcgg cggagggggc ggcgcggcgc
     1201 ccgccggcct cgccaccctc caacacctcc cgcagatcca cggtccgatc catcatcgcc
     1261 cagcggagca ggagcgtctc gaccacgagc cgggggttgg cgctccggcg gaccagggct
     1321 tcgctgtccg tcagcaggcg caacatccgc accacgtccc cgggctccag ccggtcgcgg
     1381 taccgctcca ggctctgccg cacggcctcg gtcaacccgt ccggggcggt cccgagctgg
     1441 agcatgagca gggcgcggag cagctcgccc gccccgccga tgaactccgt caggtcggcc
     1501 ccggcgtcca ccaggcggtc caccagcggg aacacgccct cgggccgttg gtcggccacc
     1561 agcccgagcg cctcggcgta gagctcgtcc tccaccaggc ccagcacctc gcggacccgc
     1621 gccgccgtca cggcgccgtc gccgaagctg aggcactgat ccagcaccga cagcgcgtcg
     1681 cgcatgccgc cgtcggcctg tcgcgcgatg agggtgaggg cgtcctcgtc cgcggcgatg
     1741 ccttccgcgt cgagcacctg ccggagccgc tggcggatgg ccgccggccc gatgcggcgg
     1801 aagtcgaagc gctgcagccg cgagagcacc ggcgccgcgg tagcggcgat cttctgcggc
     1861 tccgtggtgg cgaagacgaa gaccactccg ggcggcggct cctccaggat cttgagcagc
     1921 gcgttccacg cctcccgggt gagcatgtgg gcctcgtcca cgatgtagac cttgtggtgc
     1981 cccgcctgcg aggccgcgta catggcacgc tcccgcaggt cgcgcgcgtc gtccaccccg
     2041 cggttgctgg ccgcgtcgat ctccaccacg tccagactgg ccgcgccatt ccagatccgg
     2101 aggcagctct cacactcccc gcaaggatca ccgctgggct gccggttggg gcagttcagc
     2161 gccatggcga ggatgcgcgc ggccgtcgtc tttcccacgc cgcggggacc ggtcagcaga
     2221 tagccgtggc ccacgcgctc gcgcgcgacg gcgccgcgca gcacggccgc cacgtgatcc
     2281 tgcaccagca ggtcggcgaa tcgcttggga cgataacggc gggcgagggc aagcatgggt
     2341 ttcaagagga gggagagtgg agtgccccag gcgacccgaa gcgacaccgg acatcgctta
     2401 gcgctgctac cggcgaggtc ctgacgcggt tcgcgcgccg gcgccctccg gacctggggc
     2461 acccgcaata tagtcgggga gccggtgggc atggaagcct cgtactttgg ccaaccctca
     2521 ccccaacagc gcgcgctggc gctgctgcat cttccgcagc tcccaggtct ccgcgacgac
     2581 cccgccaagc aggaagacca ccgacgtgta gtggatccag aggatgagca gcaccgccgc
     2641 gccgatgttc gcgtcgccgc tggggccctc gaacgaggcg aagttggcga gatagagccc
     2701 gtacaggcgc ttggccagct cgaacagggc cgcggtgaag gtcgcggcga gcagcacggt
     2761 gcgccagggc agccggcggg gcgaggcgta ggcgtaggtg aggtagaaca gggataccga
     2821 gaagctgaag gcgagcaact cgcccaggag ccggccgagg gtggacagga agaacgagag
     2881 ctcgggcacc tgggtcacgc cccggttctg aagcagcgcc aggccggtgg tcagcaacgt
     2941 gttcgccagg aacagcacca ccgtggcgac caccatcccg acgtcccgga ccttggcgta
     3001 cagcaggctg aggaggaagt gccgctgccg gcccgggcgg gccgagatgt cgtagatctc
     3061 gttcaacgag atccggatgc cggcgaagag ccgggtgctg aaccagacga acgcggggat
     3121 cgcgtagagc gagatctgtc cccggttctg ggaaacccgc accagcagcg cctcgatcac
     3181 cccgaagggg tcctgtcccg gcgtggacac gtgcgggggg aagaagcggt ggaagagggc
     3241 ggccgcgtcc accgtgctgt tgccctcgag ggcctgggcc agatgggtga ggccgatcag
     3301 caggagcagc acgaacggga tggccgccag cagcgcgtcg aaggtcagcg cgctcgcgag
     3361 gaaaggaaga ttgtactcgt cggcggcctg cagcgtacgg cggatgaagc cggcgggcgt
     3421 ccggtgccac ccgccgggcc ggaccgtgct caggcgagcg gctcctcgag gtctccggag
     3481 gcgcggcgcc gggcacgggc ctcggccaga cggcgctcca gctcctcccg agccgagggg
     3541 gccgacgtcc ggcgcaccga ggggggctcc ctggactcga ggagctcctc ctcgtcgaag
     3601 tcctcctcgt ccaggtcgcg gagcgactcc cgggggccgc cgaactgctg ggccagctcg
     3661 tcgagcttct cctcggtcat ggcacgcagc ttccacagcc tgcgctgaac cccgcgacgg
     3721 gtctcctcgc cgctgcgggg cgcgtacatg agcgcgaggc ccgcgcccag caccgcaccc
     3781 cagaacagcc acttggcgga ggaatccccc cgctgcacgt agaccacttc cctgcccttg
     3841 tgacgcatgc gtccccctat tccccggcgt cggggtcgtc ggccgcggcc accagcacgg
     3901 gcttgagcgc cgcgtgatgc tggaggggag cctggacgaa acggttgatg tggtcctccg
     3961 tcccgttcac gttgagctgc tcgaacagga aggcgaacgt gcgctcgagg tcgccggcaa
     4021 tggcggtgcg gatgtcctcc gacaggcccc agaggtcgcg cttgaacggt ccgatggcct
     4081 tcttgcgggc tttgtagtag aactgctcct cggtgtcgcc gctcttgcgc tccgaggcgg
     4141 cgttctcatc cagccaggag cggatgcgcc ggcggaggtc ctccggcagc cggggatggt
     4201 cgaagacgat gttctggaag ttggtggcga ggtggatctc ggcggtctcg atccggggga
     4261 agttgccgaa ggcgttcgac ggcagggtgc tggcaccgtg ctgcacggcg ccggcgagcc
     4321 cgtactgctc ccgcgccacc cggctgagcg cctccagcgc ctggagatcg agcttcacgt
     4381 cggcgatgga tccgtc
//
LOCUS       DASUYN010000281         2035 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1633768, whole genome shotgun sequence.
ACCESSION   DASUYN010000281 DASUYN010000000
VERSION     DASUYN010000281.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2035
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1633768"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1567
                     /locus_tag="VF061_05615"
     CDS             <1..1567
                     /locus_tag="VF061_05615"
                     /inference="COORDINATES: protein motif:HMM:TIGR04514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GWxTD domain-containing protein"
                     /protein_id="HEX6669012.1"
                     /translation="SAEVAFERFLTAGGGRALGLLELARTRLARGSVRGEHAYYGGAA
                     MEDPVAAAGYRADLAMIAGDAELARFDRAAGPARADFLKRFWTDRDRLEMRAPGERLR
                     EHYRRLLHARRHFALTVSRRFYGPADAYRSGGLEIDDRGVIYVRHGEPAERLRPFVYG
                     LMPNESWRFNRAEGDFLLHFSSGYDSNGGGDLYDYRLVESVLDLRGASDAPVDQLLLS
                     REPLSRLYGRMLHWGQYGAARSRGSERGIGRASIAIGTTTDSHELQFPDTLSGVVDLV
                     TVGGTRGGTLGHLVFAVAEPGTRPEREAGGVRYTVRLRAVASDGRGRPFADLDTTIVF
                     RPSAPLGRAQYLIGRAELPLPPGRWSWRAALQVGDSVGIVLPRDTVQVGPTGAGLSLS
                     DLALGIRGASARWEPIPGDTVLLTPFDLFLEGAEVELYYEASGAMVGAPYRHEIAVFR
                     VRGRPAKPERRPVVTLGFDEPALEPLLRSQRVLQLARLKPGRYLIEVLVRGPDGEAAA
                     RRREFLVVRPGDR"
     gene            complement(1581..>2035)
                     /locus_tag="VF061_05620"
     CDS             complement(1581..>2035)
                     /locus_tag="VF061_05620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GMP synthase (glutamine-hydrolyzing)"
                     /protein_id="HEX6669013.1"
                     /translation="LRELFKDEVRQVGRELGLPEEMVGRHPFPGPGLAIRVLGEATRE
                     NLDVLRRADHIYIEEIRAAGLYDDIWQAFAVLLPIRSVGVQGDFRTYDQVIALRAVTS
                     RDGMTADWFPFPPEVLGRVANRIANEVDGVNRVVYDVSSKPPATIEWE"
BASE COUNT          267 a          712 c          751 g          305 t
ORIGIN      
        1 ctcggcggag gtggcgttcg agcgctttct cacggccggc ggaggccggg cgctggggct
       61 gctcgagctg gcgcggaccc ggctggccag gggcagcgtc cggggagagc acgcctacta
      121 cgggggcgcc gccatggagg acccggtggc ggccgccggc taccgcgccg acctcgcgat
      181 gatcgcgggc gacgccgagc tcgcacggtt cgaccgcgcg gccggcccgg cgcgagcgga
      241 cttcctcaag cggttctgga ccgaccggga ccgcctggag atgcgtgcgc ccggtgagcg
      301 gctgcgcgag cactaccgcc ggctgctgca cgcccggcgg catttcgcgc tgaccgtgag
      361 tcggcggttc tacggccccg ccgacgccta ccgctcgggc ggcctggaga tcgacgaccg
      421 cggcgtgatc tacgtacgtc acggcgagcc cgcggagcgg ctcaggccgt tcgtctacgg
      481 actcatgccc aacgaatcct ggcgtttcaa ccgggcggaa ggcgatttcc tcctccactt
      541 cagctcgggc tacgactcga atggtggcgg cgacctctac gattaccggc tggtggagag
      601 cgtgctggac ctgcgcggcg cctcggatgc accggtggac cagctcctgc tctcgcgaga
      661 gccgctctct cgtttgtacg gccggatgct gcattggggg cagtacgggg cagcccggtc
      721 ccgggggagc gagcgcggga tcgggcgggc gagcatcgcc atcggcacca ccaccgacag
      781 ccacgagctc cagttcccgg acaccttgag tggggtggtg gacctggtca cggtgggcgg
      841 cacccgcggc ggcaccctcg gccatctggt cttcgccgtc gcggagcccg gaacgcggcc
      901 cgagcgggag gccggcggcg tgcgctacac cgtccgtctc cgcgccgtgg cgagcgatgg
      961 gcgcgggcgc ccgttcgccg acctggatac caccatcgtg ttccggccct cagcaccgct
     1021 gggccgggcc cagtatctga tcgggcgcgc ggagctaccg cttccgccgg gtcgctggtc
     1081 ctggcgcgca gcgctgcagg tgggggacag cgtggggatc gtgctgccgc gcgacaccgt
     1141 gcaggtgggg cccacgggcg ccggcctttc gctgagcgat ctcgcgctgg gcattcgcgg
     1201 tgcgagcgcc aggtgggagc cgatcccggg cgataccgtg ctgctcacac cgttcgatct
     1261 cttcctggag ggagccgagg tcgagcttta ctacgaggcc tcgggagcga tggtcggcgc
     1321 cccataccga cacgagatcg ccgtcttcag ggtccggggc cggcccgcca agccggagcg
     1381 tcgccccgtc gtgacgctcg gcttcgacga gcccgccctc gagccccttc tccgctccca
     1441 gcgagtgctg cagctcgcac gactgaagcc ggggcgctac ctgatcgaag tgctggtgcg
     1501 ggggccggac ggcgaggcgg ccgccaggcg gcgggagttc ctggtagtgc ggccgggaga
     1561 ccggtagccg gcgggcgccc tcactcccat tcgatcgtcg cgggcggctt cgagctgacg
     1621 tcgtagacca cgcgattgac gccgtccact tcgttggcga tgcggttggc gacccgtccc
     1681 agcacctccg gcgggaaggg aaaccagtcc gccgtcatgc cgtcgcggct ggtgacggcg
     1741 cggagcgcga tgacctggtc gtaggtgcgg aagtccccct gcaccccgac cgagcggatg
     1801 gggagcagca ccgcgaacgc ctgccagatg tcgtcgtaca gcccggcagc gcggatctcc
     1861 tcgatgtaga tgtggtcggc tcggcggagc acgtcgaggt tctcgcgggt cgcctcgccg
     1921 agcacccgga tggcgaggcc gggtcccggg aacggatgcc ggcccaccat ttcctcgggc
     1981 agtcccagct cgcgtcccac ctggcgcacc tcatccttga acagctcccg taacg
//
LOCUS       DASUYN010000282         3259 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1633786, whole genome shotgun sequence.
ACCESSION   DASUYN010000282 DASUYN010000000
VERSION     DASUYN010000282.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3259)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3259)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3259
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1633786"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..507)
                     /locus_tag="VF061_05625"
     CDS             complement(<1..507)
                     /locus_tag="VF061_05625"
                     /inference="COORDINATES: protein motif:HMM:NF014636.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HEX6669014.1"
                     /translation="MSVTVSIPTPLRSFTGGHEAVELTGSTVGEVIDGLLATHGGLKR
                     HLVQEDGRLRNFVNLYLNDTDIRHLDSTDTPVREGDVLTIVPSIAGGRPAVESKEELP
                     RLSHAEVLRYSRHLLLPEVGLEGQRKLKAARVLTIGAGGLGSPLSLYLAAAGVGTIGI
                     VDFDVVDLT"
     gene            complement(510..941)
                     /locus_tag="VF061_05630"
     CDS             complement(510..941)
                     /locus_tag="VF061_05630"
                     /inference="COORDINATES: protein motif:HMM:NF025819.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M67 family metallopeptidase"
                     /protein_id="HEX6669015.1"
                     /translation="MTLRISEGLLEEIRRHGQSAYPAECCGALAGRIQGSGDKEVVRL
                     APAVNRRTDDPHRYLIAPDDLRRLEAELRGEGLEIVGYYHSHPDHPAVPSGFDTEHAW
                     PWYSYLIVRVEGGRGREAASWTLDDEQPRMRSESLEVLSEV"
     gene            complement(938..1867)
                     /locus_tag="VF061_05635"
     CDS             complement(938..1867)
                     /locus_tag="VF061_05635"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent cysteine synthase family protein"
                     /protein_id="HEX6669016.1"
                     /translation="MTAVRELSVSQEPALWGLVGNTPLLPVSLPGEGRGRLWLKAEWL
                     NPGGSVKDRAARAILREGLARGELPGKRLLDASSGNTGIAYAMLGAAAGVKVTICLPG
                     NASPERWSLLKIYGAEVVVTDRMEGTEGAARKARELAESAPETYFYADQYSNTANPKA
                     HRETTGPEIWAQTGGRLTHFVAAMGTTGTMMGTGRFLKEKNAGITLVGVQPDSPFHGL
                     EGLKHLATTSNPPALYDPAVPDRVAEIPTETADRTARWLARESGFLVGWSAGAAAAAA
                     LDVLRAEPDAQVVVIGCDTGTRYISEPHRWADR"
     gene            complement(1934..2392)
                     /locus_tag="VF061_05640"
     CDS             complement(1934..2392)
                     /locus_tag="VF061_05640"
                     /inference="COORDINATES: protein motif:HMM:TIGR00738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEX6669017.1"
                     /translation="MRVTTWTEYSLIISLHLAKRGGTGSGPVAARELADAEKLPADYV
                     EQILLRLRRAGLVESVRGARGGYLLARHPSTISVRDVMTASEHQTFEVNCASHPVDAE
                     RCSPGSTCSIRPVWQALQQRVDDLLAGISLADLMKEEPQVQELVGISSAS"
     gene            complement(2407..3207)
                     /locus_tag="VF061_05645"
     CDS             complement(2407..3207)
                     /locus_tag="VF061_05645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669018.1"
                     /translation="MGLSPTHSMVETPSREFFREAMEALSRARIPFLVGGTFAFVHQA
                     GIDRSTKDLDIFVLPSDVQRLLRASSDAGYEADLIFSHWLAKIRSPAGFIDVIFSSGN
                     GVAVVDDQWFEHATEREVLGTQVLVAPPEESIWSKAFVMERERFDGADVAHILLAVGD
                     QLDWRRLIERFGPHWRVLFAHLVLFGFIYPSERSKVPPDVMRELADRLAEETRLPDAE
                     DPVCYGTLLSWSQYLGDVLGGSFRDARIRPYGNLTPEEVARWTSAEKK"
BASE COUNT          500 a         1152 c         1124 g          483 t
ORIGIN      
        1 ggtgaggtcc accacgtcga agtccacgat cccgatcgtg cccacgcccg ccgccgcgag
       61 atagagcgag agcggcgagc ccagcccgcc ggccccgatc gtgagcacgc gggccgcctt
      121 cagcttccgc tggccctcca gcccgacctc gggcagcagg agatgccgcg aatagcggag
      181 cacctccgcg tgggagagcc tgggcagctc ctccttcgac tccaccgcgg gacggccgcc
      241 ggcgatgctg gggacgatgg tgagcacgtc gccctcgcgt accggcgtgt cggtggagtc
      301 gaggtgacgg atgtcggtgt cgttgagata gaggttgacg aagttccgca ggcggccgtc
      361 ctcctgcacc aggtgacgct tgaggccgcc atgggtcgcc agcagtccgt cgatgacctc
      421 acccacggtg gagccggtga gctcgacggc ttcgtggcct ccggtgaagc tgcgaagggg
      481 agtggggatg ctcacagtca cggacatgtt cacacctcgc tgagcacttc gagtgactcg
      541 gaccgcatgc gcggctgctc gtcgtccagc gtccagctgg ccgcctcgcg gccgcgcccg
      601 ccctccaccc gcacgatcag gtagctgtac cacggccagg cgtgctcggt atcgaagccc
      661 gacgggaccg cggggtggtc cggatgcgaa tgataatagc cgacgatctc gagcccttca
      721 ccgcggagct cggcttccag ccggcgaagg tcgtccggcg cgatgagata acggtgcgga
      781 tcgtcggtgc gccggttcac cgcgggcgcc agccggacga cctccttgtc gccactgccc
      841 tggatccgac ccgccagcgc gccgcagcac tccgccggat acgccgactg gccatggcgg
      901 cggatctcct ccagcagccc ctccgagatc cgcagggtca ccggtcggcc caccggtgcg
      961 gctcgctgat gtagcgcgtg ccggtgtcgc acccgatcac cacgacctgc gcgtcgggct
     1021 ccgcgcggag cacgtccagc gccgcggcgg ccgccgcgcc ggccgaccag ccgaccagga
     1081 agcccgactc ccgcgccagc cagcgcgccg tgcgatccgc ggtttcggtc gggatctccg
     1141 ccacccggtc gggcacggcg ggatcgtaga gcgccggggg attggaggtg gtcgccaggt
     1201 gcttgaggcc ctccaggccg tggaacgggg aatcgggctg gaccccgacc agagtgatgc
     1261 cggcgttctt ctccttcaag aagcggccgg tccccatcat ggttcccgtg gtgcccatcg
     1321 cggccacgaa gtgggtcagc cgcccgccgg tctgggccca gatctcgggg ccggtcgtct
     1381 cccggtgcgc cttggggttg gcggtgttgc tgtactggtc ggcgtagaag tacgtctccg
     1441 gcgccgactc ggccagctcc cgcgcctttc gcgcggcgcc ttcggtgccc tccatgcggt
     1501 cggtcaccac cacctcggcc ccgtagatct tgagcagcga ccagcgctcc ggactcgcgt
     1561 tgccgggcag gcagatcgtg accttcacgc ccgcggccgc gccgagcatc gcgtacgcga
     1621 taccggtgtt gccgctggag gcgtccagca accgcttgcc ggggagctcc ccacgcgcca
     1681 ggccctcgcg gagaatggcc cgagcggcgc gatccttgac gctccccccc ggattgagcc
     1741 actcggcctt gagccagagc cggccgcggc cctcccccgg aaggcttacc ggcaggaggg
     1801 gcgtgttccc cacgaggccc cacagcgccg gctcctgcga tacggacagc tctcgaaccg
     1861 cggtcatcac gaccctccaa aatgaaaaac ccgaccggtc ggtcgggccc gagcgcgtcg
     1921 cggactgcgc gcgctaactc gccgacgaga tcccgaccag ctcctggacc tggggctcct
     1981 ccttcatcag atcggcgagg gagataccgg ccagcaggtc gtccacccgc tgctggaggg
     2041 cttgccacac cggcctgatg ctgcaggtgg atcccgggct acatcgctcg gcgtccaccg
     2101 ggtggctggc gcagttgacc tcgaaggtct ggtgctcgga ggcggtcatg acgtcacgga
     2161 ccgagatggt cgacgggtgc cgggcgagca gatacccgcc cctggccccc cgaacgctct
     2221 cgaccaggcc cgcccgccgg agccggagca ggatctgctc gacgtagtct gcgggcagct
     2281 tctccgcgtc agccagctcg cgagccgcga ccgggccgct gcccgtgccg ccccgcttgg
     2341 cgaggtgtag ggagatgatg agactgtact cggtccaggt cgtaacccgc atcgtggctg
     2401 gaatatctac ttcttttcag ccgacgtcca gcgggcgacc tcctcgggag tgaggttgcc
     2461 gtagggccgg atccgggcat cccggaagga gccgccgagc acgtcgccca ggtactggga
     2521 ccacgagagc agcgtgccgt agcacaccgg atcctcggca tccggcagcc gggtttcctc
     2581 cgccagccgg tcggccagct cccgcatcac gtcgggcggt accttggagc gctcgctggg
     2641 gtagatgaag ccgaacagca ccaggtgggc gaagagcacc cgccagtggg ggccgaagcg
     2701 ctcgatcaga cgccgccagt cgagctggtc gccgacggcg aggaggatgt gggccacgtc
     2761 ggcgccgtcg aaacgctcgc gctccatgac gaaggccttg gaccagatgc tctcttcagg
     2821 cggcgccacc agcacctggg tgcccagcac ctcgcgctcc gtggcgtgct cgaaccactg
     2881 gtcgtccact accgccaccc cgttccccga gctgaagatc acgtcgatga agcccgcggg
     2941 cgagcggatc ttcgccagcc aatgcgagaa gatcaggtcg gcctcgtagc ccgcgtcgga
     3001 ggaggcgcgg agcaggcgct ggacgtcgct cgggaggacg aagatgtcga ggtccttggt
     3061 ggagcgatcg atgccggcct ggtggacgaa cgcgaacgtc ccgcccacca ggaacggaat
     3121 cctggcccgg gacagggcct ccatcgcctc gcggaagaac tcgcgggacg gggtctcgac
     3181 catgctatgg gtgggcgaca gccccatccg gcgctcccaa gtggggatcg ctatcatagg
     3241 cacggccggg ggagacagt
//
LOCUS       DASUYN010000283         4330 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1633817, whole genome shotgun sequence.
ACCESSION   DASUYN010000283 DASUYN010000000
VERSION     DASUYN010000283.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4330
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1633817"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            243..2885
                     /locus_tag="VF061_05650"
     CDS             243..2885
                     /locus_tag="VF061_05650"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX6669019.1"
                     /translation="MATTLTCFNCGEGADEADRFCSQCGVELAATSQATALLETPSHP
                     DDDPDSPWAEVVQRLRRATHGEFEVGRELGRGGMAAVFLAHDIALDRKVAIKVMSPGL
                     LMGEGMIERFKREAITIAHLNHPNIVSCFSVRQAEGLHFFVMRYIQGRSLEQIIGDAG
                     RLSLPIVRSILCQVSSALTYAHRSRVVHRDIKPANILIDVDGNAVVTDFGIAKVARLP
                     GQTHTGALVGTPAYMSPEQCSGGEVTGATDQYALGAVAYEMITGQAPFTGSTLTVMQS
                     QVDTAPPPIGERCPDCPPELEAAVLRMLAKDPADRFPSMADAKAALGAVPLLESDPLL
                     AELCRLAAASTPDAPTAPAPAAPSDTPRRSVARSGLGGLARSITILPPPAELAVGEGF
                     ALVALVRGERGAPLPGHTIEWSTDSPTVLHVDQVRKTATAVAPGTAMLVAACDGVEAQ
                     VRVLVPSDALDLLEPNQGLRAAAVQISSPPRSVRAGDSFVLTALPLDAAGQPLPEASV
                     LWSSSEVQVAVVTAGGWVAALGGGQAVLTATCGLASGSVTVYVEHAKPARTPPRLPHR
                     LVPVPAGAAEAPGRSAWRRRGERSRRRLVNLSVLLLGVAGSLYLIGGFGDAAARRSQA
                     GPPADTIPSSTGTAGAAAGPDTLPPIHRGIQPAPAARRPPRQAARPSPPAASGPRTDS
                     ARLGGSVDRAAPASPITDLHLAATDTARPDPEPAADREVAGYAPMAPTEPPRTDAARP
                     VVPGRAPEPVAKPDAPPLDRRKLEATLRDGVEECYRVVRSKELDRLERLYAPKSVADE
                     EKLRRLIRILRTEPWQAVVGRRVDGVRELGPRAAAAEFSFRLAWRDSYGGRLTSQPIF
                     RAEFARDGDEWTMSSCRIVGSPKL"
     gene            complement(2798..3247)
                     /locus_tag="VF061_05655"
     CDS             complement(2798..3247)
                     /locus_tag="VF061_05655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669020.1"
                     /translation="MPVRETEVTANAILLKEHETTGPLPIGFGLEWGGTRYDHFEVST
                     DGVIAFVRVTHQMGLPNRVWLADGRTRLGGGRVTYEVRGVAPRRRLVVSLADEVSLGT
                     TIRVTVHERTGIVELDPGGQSFGEPTMRQLDIVHSSPSRANSARKIG"
     gene            3331..>4330
                     /locus_tag="VF061_05660"
     CDS             3331..>4330
                     /locus_tag="VF061_05660"
                     /inference="COORDINATES: protein motif:HMM:NF015649.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BTAD domain-containing putative transcriptional
                     regulator"
                     /protein_id="HEX6669021.1"
                     /translation="MILCRTLGPIEVTLDGGPAPADLLWRKNLALLIYLARSSRRTRS
                     RDHLVGLLWGDRTETAARHSLSEALRVIRRHAGDTAVEAAGGQIRLAPGAIEVDVEHL
                     EALAESEQWEQAAELIAGEFLEGFAVPGASEFENWLTSERETWRRRGVDVLVRAADAL
                     AQAGRTHEASAHAARALALDPVSERGLTASLRCLSLLGDRAGALELYDRFAGRLKDVV
                     GTDPGEETRALLERIRRERSLRPELAGDLSGGVATLRAPFEGRAGELSRLLQAVGRSA
                     RERLATVLVLEGDSGVGKTRLLEELLARLRLDGFSIATARAVEADHEEPWSGLLALA"
BASE COUNT          567 a         1603 c         1507 g          653 t
ORIGIN      
        1 tggaggcggt cgcagcctga gattcgcgcg atgggggggg taccccccga ccggttccgg
       61 cgcacggtct cggtggcggg tctcatcgtc ctgatcggcg catcctacaa cccccctttt
      121 tacaacgggt tacgtgtgta ccttgaagct gtgcgtgaag ctgccgccag gcggcgcgat
      181 ttgcgcccct cggcaccggc tccgatattt gcagcgccga tgcgacgatt tcctgtgacg
      241 ccatggcgac gacgctgacc tgtttcaatt gcggcgaggg cgccgacgag gccgaccgct
      301 tctgctccca gtgcggggtg gagctggccg cgacctcgca ggcgaccgcg ctcctcgaga
      361 ccccttccca cccggacgac gaccccgatt cgccctgggc cgaagtggtc cagcggctgc
      421 gccgcgcgac ccatggtgag ttcgaggtcg gccgcgagct gggccggggc ggcatggccg
      481 ccgtcttcct cgcccacgac atcgccctcg accgcaaggt cgccatcaag gtgatgtctc
      541 ccggtttgct catgggcgag gggatgatcg agcggttcaa gcgtgaagcc atcacgatcg
      601 cacacctgaa ccaccccaac atcgtctcct gtttctccgt ccgccaggcg gagggcctgc
      661 acttcttcgt catgcggtac atccagggtc gctccctgga acagatcatt ggcgatgcgg
      721 gcaggctttc ccttcccatc gtgcggtcca ttctgtgcca ggtgagctcc gccctcacct
      781 acgcgcaccg ctcccgggtc gtgcaccgcg acatcaaacc ggccaacatc ctgatcgacg
      841 tggacgggaa cgcggtggtc accgatttcg gcatcgccaa ggtcgccaga ctcccggggc
      901 agacccacac gggtgcgctg gtcggtacgc ccgcctacat gagcccggaa cagtgttccg
      961 gcggcgaggt caccggcgcg accgaccaat acgccctggg cgcggtcgcc tacgagatga
     1021 tcaccggcca ggcgccgttc accggctcga cgctcacggt gatgcaatcg caggtggata
     1081 ccgcgccgcc gccgatcggc gagcgctgcc ccgattgtcc gccggagctc gaagccgccg
     1141 tcctccgcat gctcgccaag gatccggccg accgtttccc cagcatggcc gacgcgaagg
     1201 ccgccctggg tgcggtcccg ctgctggaaa gcgatccgct gctcgcggag ctttgccggc
     1261 tcgccgcggc gagcaccccc gacgccccca ccgcgcccgc gccggccgca ccctccgata
     1321 ctccccggcg ctcggtcgcc cgttcgggcc tcggcgggtt ggcccggagc atcacgatcc
     1381 tcccgccgcc ggccgagctg gccgtgggcg agggcttcgc gctcgtcgcg ctcgtgcggg
     1441 gcgagcgtgg ggcgccgctc cccgggcaca ccatcgaatg gagcacggat tcccccaccg
     1501 tgctccacgt ggaccaggtc cggaagaccg cgaccgccgt ggcccccggt accgcgatgc
     1561 tcgtggcggc ctgcgacggc gtcgaggccc aggttcgggt gctggtcccg tccgacgcgc
     1621 tggacctcct cgagccgaac caggggctgc gggccgcggc ggtgcagatc tccagtcctc
     1681 cgcgatcggt gcgggcgggc gattccttcg tgctgacggc gctcccgctg gacgccgccg
     1741 gccagccgct tcccgaggcc tccgtgctct ggagctcgag cgaggtgcag gtcgccgtgg
     1801 tgaccgccgg cggttgggtc gccgcgctgg gagggggaca ggctgtcctg accgcgacct
     1861 gcgggctcgc gagcggttcc gtcaccgtct acgtggagca tgccaagccc gcccggacgc
     1921 cgccccgcct cccacaccgc ctcgttccag tgccggccgg agcggccgag gctccgggcc
     1981 gctccgcctg gcgccgccgc ggggagcgct cccggcggcg gctggtcaat ctctcggtgc
     2041 tgttgctcgg ggtggcagga tctctctacc tcatcggcgg cttcggtgac gccgccgcgc
     2101 ggcgttccca ggccggacca ccggcggata cgattccctc gtccaccggc accgccgggg
     2161 ctgccgccgg gcccgacacc ctccctccga tccaccgggg aatccagccg gcgcccgccg
     2221 cgcgccgccc gccacgccaa gccgcgcgtc catcgccacc cgctgcctcc ggcccgcgca
     2281 ccgactccgc ccgcttgggg ggcagtgtcg accgagcagc cccggcctcg ccaatcaccg
     2341 accttcatct ggccgccacc gacaccgccc ggcccgatcc cgagcccgcg gccgatcgcg
     2401 aagtcgcggg ctacgcgccc atggctccga ccgagccgcc gcggaccgac gccgcccggc
     2461 cggtcgtgcc ggggcgggca ccggaaccgg tcgcgaagcc agacgcgcct ccgctggacc
     2521 ggcgaaagct ggaagccacg ctccgcgacg gcgtcgagga gtgttaccgg gtggtgcgct
     2581 ccaaggaact cgaccggctc gagcgactct atgcacccaa gagcgtcgcc gacgaggaga
     2641 agcttcggcg cctcatccgg atcctgcgga ccgagccgtg gcaggccgtg gtcggccggc
     2701 gggtcgatgg cgtccgcgag ctcgggccca gggccgcggc agcggagttc agtttccggc
     2761 tcgcctggcg tgattcctat ggtggacgcc tcaccagtca gccgatcttc cgcgccgagt
     2821 tcgcgcgcga cggcgacgag tggacgatgt ccagctgtcg catcgtcggc tccccgaagc
     2881 tctgacctcc cgggtccagc tccacgattc cggtgcgctc gtgcaccgtg acccggatcg
     2941 tcgtcccgag ggacacctcg tccgcgagcg acaccaccag cctccgtctc ggtgcgacac
     3001 ctcgaacttc gtacgtcaca cgaccaccac ccagtcgggt cctcccatcc gccagccata
     3061 cccggttggg caggcccatc tggtgggtga cccgcacgaa ggcgatgacg ccgtcggtgg
     3121 agacctcgaa gtgatcgtag cgtgtcccac cccactccaa cccgaagccg atggggagtg
     3181 gtccggtggt ctcgtgctcc ttcagcagta tggcgttggc cgtgacttcc gtctcccgca
     3241 ccggcatgtg tcctccgagc ctatcgtcgg gttatcccga ccggccgaca gtgctcgctc
     3301 gatgtcaagt gggcgtcaag tgaggctccc gtgatccttt gccgcacgct gggcccgatc
     3361 gaggtgacgc tggacggggg gcccgccccg gcggacctgc tgtggcgcaa gaatctggcg
     3421 ctgctgatct atctcgcccg ctcctccagg cggacccgga gccgggatca cctggtcggc
     3481 ctgctgtggg gagaccggac cgagaccgcc gcccgccatt ccctcagcga ggcgctcagg
     3541 gtcattcgcc ggcacgccgg agacaccgcg gtggaggccg ccggcgggca gatccgtctc
     3601 gcaccggggg cgatcgaggt tgatgttgag cacctcgaag cgctggcgga gtcggagcag
     3661 tgggagcagg cggcggagct gatcgccggt gagttcctgg agggcttcgc cgtgccggga
     3721 gcgtccgagt tcgagaactg gctcacgtcc gagcgggaga cctggcgtcg ccggggggtg
     3781 gacgtcctgg tgcgcgcggc cgatgccctg gcccaggccg ggcgcaccca cgaggcctcg
     3841 gcgcacgccg cccgggcgct ggccctcgat cccgtatcgg agcgcggcct gaccgcctcg
     3901 ctccgctgcc tctcgctgct gggcgacagg gcgggcgcgc tcgagctgta tgaccgcttc
     3961 gccggccggc tcaaggatgt ggtgggcacc gacccgggcg aggagacgcg cgccctgctg
     4021 gagcggatcc ggcgggagcg cagcctgcgt cccgagctgg ccggtgacct gtccggcggg
     4081 gtggcgacgc tacgcgcgcc cttcgaggga cgcgccggcg agctgagccg gctgctgcag
     4141 gcggtcggga gatcggcccg ggagcgcctc gcgacggtgc tggtcctgga gggcgactcg
     4201 ggggtgggca agacccggct gctggaggag ctgctcgctc ggctccggct ggacgggttc
     4261 tccatcgcca ccgcgcgtgc cgtcgaggcc gaccacgagg agccgtggag cgggctgctg
     4321 gcgctggccc
//
LOCUS       DASUYN010000284         3959 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1855122, whole genome shotgun sequence.
ACCESSION   DASUYN010000284 DASUYN010000000
VERSION     DASUYN010000284.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3959)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3959)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3959
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1855122"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1158)
                     /locus_tag="VF061_05665"
     CDS             complement(<1..1158)
                     /locus_tag="VF061_05665"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX6669022.1"
                     /translation="MNGDHDPKVTFLRAGVPSRSTGRTTSWTLPPDLREEAVRRVRAV
                     ALLYAAVYFLMGIMPPLLTAEGRALFVSRAIHWLPGTVSIADALLLAWLVRSPRFSPA
                     VKVYAGLAFQVLGSYGIAAAEYHDIQSPIMYREYGAGTFGLSWVTVWVLLFSVVVPAP
                     PRLALLSATLSLSAVPVMYAQGDNVALAPGDFFLRLVLPGLGVLLMSYVGSRVVYGLG
                     TAVSKAREMGSYRLVERLGKGGMGEVWRAQHRMLARPAAIKLIRPEVLGAEDPGTREL
                     LLRRFEREAQATAQMRSPHTLALYDFGAADDGTFYYVMELLDGFDLSALVERFGPVPP
                     GRAVHFLRQVCASLAEAHEAGLIHRDVKPANLYACRYGREVDFIKVLDFGLV"
     gene            complement(1225..2316)
                     /locus_tag="VF061_05670"
     CDS             complement(1225..2316)
                     /locus_tag="VF061_05670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669023.1"
                     /translation="MTAIAAVAALSGCAVSSSSTQLAADPDPIEVRMTPTVIYAGQRA
                     LVLVRSPGADSIVLESENGVDRYWSADSVLSVSLTADFGDRVPGSQFAPEWNGRTLPY
                     LKKPVRIAVCRTGRCREVHHEIAVKLPVRNERVVAVTAGWSSVFARRTIRGGNRTVLF
                     EDALTSGVWSLQGEWSAGPWNGRVQGLLGADDRGLWLDLSRVLKGGDGMSYGLAMHAG
                     VTQSDWLDGGSSPLPGHRTTYRAGIGPSIMVKGITASSQLGIYTDGVETLQIASTRLS
                     VNGNLTSIRHPMTITAEKTFAFGGGAIVSRRRDALERLTAAIRIVDDFALQVGLSSHR
                     IAWPTDDPSDDLRASDTRMILGGQYSLTW"
     gene            complement(2793..3386)
                     /locus_tag="VF061_05675"
     CDS             complement(2793..3386)
                     /locus_tag="VF061_05675"
                     /inference="COORDINATES: protein motif:HMM:NF018984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABATE domain-containing protein"
                     /protein_id="HEX6669024.1"
                     /translation="MPTPEFPLVGNLLWLDFVNTEPVLDGARVDLLHDVEDLVAWLQT
                     ADAPPQPTRPALRGGTSEGRAVFREALALRAALRAGAERLAEGKPPGEELVRAINRVL
                     AERPGYRELVREGKGWVTRVRPVTISARQVLVPIAESAAWLLEHGDPSLVRRCEGSAC
                     VLLFYDTTRNRSRRWCSMEGCGSRAKAAAYYRRTRGG"
     gene            3511..>3959
                     /locus_tag="VF061_05680"
     CDS             3511..>3959
                     /locus_tag="VF061_05680"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX6669025.1"
                     /translation="MATATAARLDTGHVGLNVTDLSRSTRFYREVLGLELAGESTTPG
                     KEYAFLARDGRLLLTLWRQSSGVAPTDRPGLHHLAFQVESVEQVREAERRLQARGAVI
                     HHGGIVPHREGGESGGLFFEDPDGIRLEIYAPTGAGERAAPHGDAPT"
BASE COUNT          623 a         1421 c         1386 g          529 t
ORIGIN      
        1 caccaggccg aagtcgagca ccttgatgaa gtccacctcc cgcccgtagc ggcaggcgta
       61 caggttggcc ggcttgacgt cccggtggat cagtcccgcc tcgtgcgcct cggcgaggga
      121 ggcacagacc tggcggagga agtgcaccgc ccggcccggc ggcaccgggc cgaaccgctc
      181 caccagcgcg ctcaggtcga acccgtcgag cagctccatc acgtagtaga aggtgccgtc
      241 gtccgcggcg ccgaaatcgt agagcgccag cgtatgcggg gaccgcatct gggccgtggc
      301 ctgtgcctcc cgctcgaacc ggcgcaggag cagctcccgg gtgcccgggt cctcggcgcc
      361 gagcacctcc gggcggatga gcttgatcgc cgcggggcgc gcgagcatgc ggtgctgcgc
      421 ccgccagacc tcccccatcc cgcccttgcc cagccgctcg accaggcgat agctccccat
      481 ctcccgcgcc ttcgagaccg ccgtccccag gccgtacacg acccgcgacc ccacgtagga
      541 catcagcagc acgccgaggc cgggcagcac cagtcggagg aagaagtccc cgggcgccag
      601 ggcgacgttg tcgccctggg cgtacatcac cggcacggcg gagagcgaga gggtggcgct
      661 gagcagcgcc agccggggcg gagccggcac gacgacgctg aacagcagca cccacaccgt
      721 cacccaggag aggccgaagg ttcccgcgcc gtactcccgg tacatgatgg gcgactggat
      781 gtcatggtac tccgccgcgg cgatgccgta gctgccgagg acctggaagg cgagcccggc
      841 gtagaccttg accgccgggg agaagcgggg actgcggacc agccaggcga gcagcagcgc
      901 gtcggcgatc gagaccgtcc ccgggagcca gtggatggcc cggctcacga agagcgcccg
      961 cccctccgcg gtgaggaggg gcggcatgat gcccatcagg aagtagacgg cggcgtagag
     1021 gagtgccacg gcgcgcactc gccggacggc ctcctcccgc aggtccggcg gcagggtcca
     1081 cgaggtggtc cgcccggtcg agcgggaagg gacgcccgct cgcaggaagg tgactttggg
     1141 gtcgtgatcg ccgttcacgg cagcctccgg gtccgctgaa gcctgggcgt gcccggagac
     1201 ggtcgcaagg cggcggggag gcggctacca ggtcagcgag tactgccctc ccaggatcat
     1261 gcgggtgtcg gaggcgcgca ggtcgtcgga cggatcgtcg gtgggccagg cgatccggtg
     1321 gctgctcagc ccgacctgga gggcgaagtc gtccacgatc cggatcgcgg cggtgagccg
     1381 ctccagggcg tcgcgccggc gggagacgat ggcgccgccg ccgaaggcga aggtcttctc
     1441 cgccgtgatg gtcatcgggt ggcggatgga ggtcaggttg ccgttgaccg acaaccgggt
     1501 gctcgcgatc tggagcgtct ccacgccgtc ggtgtagatg ccgagctgcg agctcgcggt
     1561 gatacccttc accatgatgc tcgggccgat cccggcgcga tacgtcgtgc ggtgccccgg
     1621 cagggggctg gagccgccgt cgagccagtc gctctgggtg acgcccgcgt gcatcgccag
     1681 cccgtagctc atgccgtccc cgcccttgag gacccgcgag aggtcgagcc acagcccgcg
     1741 gtcgtccgcg cccagcaggc cctgcacccg cccgttccac ggtcccgcgg accactcgcc
     1801 ctggagcgac cagacgccgc tggtgagcgc gtcctcgaac agcaccgtgc gattgccgcc
     1861 tcggatcgtc cggcgggcga acaccgagct ccagccggcg gtgaccgcca ccacccgctc
     1921 gttccgcacc ggcagcttga cggcgatctc gtggtggacc tcgcggcagc ggccggtccg
     1981 gcagacggcg atccggaccg gcttcttcag gtagggcagc gtccggccgt tccactcggg
     2041 ggcgaactgg ctgccgggga cacggtcgcc gaagtcggcg gtgagcgaga cgctgagcac
     2101 cgagtccgcg ctccagtacc gatcgacccc gttctccgac tcgagcacga tgctgtcggc
     2161 tccgggactg cggacgagaa ccagcgcccg ctggccggcg tagatcaccg tgggggtcat
     2221 ccggacctcg atcggatcgg ggtccgcggc cagctgggtg gaggagctcg agacggcgca
     2281 ccccgagagg gcggccacgg cggcgatggc tgtcacgccc ccgaacgacg gaaccctgaa
     2341 cgatgcaagc atccgcgctg accctctccg ggtgccggcc ggaacctgat ggcgattgct
     2401 ggagttggat tgcattgcga gaggcactgc gggaggcgca agtcacgcgc ccgccgtcgt
     2461 caggcggtaa gtcgttggcg aacattcatg tacacccgag gtacaagccc tcgctccgga
     2521 acccgctgtg gcgacgccac agcccgcgga tgagaaccgg atgacttcgg cgtgagcggt
     2581 gccgcccatc ctgggtgcgg caaacgacac tcggcgatca caccatagcg agggggttac
     2641 gaccatgcag cgtcaccacg aaggactgcc ggcggcggcc acggtggagc aggcgatcat
     2701 cctggcccag ctccagatcc tgcggcgcat ggagcgccag cggagcggct actgaggcgg
     2761 ctggggaccc gagagaccgg cggaggcgcc ggtcagccgc cccgggtgcg gcggtagtag
     2821 gccgcggcct tggcccggct cccgcagcct tccatgctgc accagcgacg gctccggttc
     2881 ctggtcgtgt cgtagaagag cagcacgcag gcggacccct cacatcgccg gacgagcgag
     2941 gggtcgccgt gctccagcag ccaggcggcc gactccgcga tcggcaccag gacctgtcgc
     3001 gccgaaatcg tcaccggccg gacccgggtc acccagcctt tcccctcccg caccagctcg
     3061 cgatagcccg gcctttccgc cagcacccga ttgatcgccc gcaccagctc ctcacccggc
     3121 ggcttgcctt cagccagccg ctccgcaccg gcccggagtg cggcccgcaa cgccagggcc
     3181 tcccggaaca ccgcccgccc ttcggaggtc ccaccgcgca gagccggccg tgtcggctgg
     3241 gggggcgcgt cagcggtctg cagccaggcg accaggtcct cgacgtcgtg cagcaggtcc
     3301 acccgcgcgc cgtcgagcac cggctcggtg ttgacgaagt ccagccagag gagattgccc
     3361 accaggggaa actcgggcgt cggcatgggc cgaatatagc gttgggaact cttaccacca
     3421 aaatagcgct tgacaggtga gagatgaggt cttaccgtct acttactgtt ttgctggtaa
     3481 tatcattcgc agccaccagg ggaaccgctc atggccaccg ctacggccgc ccgcctcgac
     3541 accgggcacg tcggcctcaa cgtcaccgac ctgtcccgct ccacccgctt ctatcgcgaa
     3601 gtcctcggtc tcgagctcgc gggcgaatcc acgacccccg ggaaggagta tgcctttctc
     3661 gcccgggacg gccgcctgct gctcaccctc tggcggcaga gctcgggggt cgcacccacc
     3721 gaccggcccg gtctccatca cctggccttc caggtggagt ccgtcgagca ggtcagggaa
     3781 gcggagcggc ggcttcaggc ccgcggcgcc gtgatccacc acggcggcat cgtcccccac
     3841 cgcgagggcg gcgagtccgg ggggctcttc ttcgaggacc ccgacggcat ccgcctggag
     3901 atctacgccc ccaccggggc gggcgagcgg gccgcccccc acggcgatgc gcccacctg
//
LOCUS       DASUYN010000285         3185 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_752164, whole genome shotgun sequence.
ACCESSION   DASUYN010000285 DASUYN010000000
VERSION     DASUYN010000285.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3185)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3185)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3185
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_752164"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            21..464
                     /locus_tag="VF061_05685"
     CDS             21..464
                     /locus_tag="VF061_05685"
                     /inference="COORDINATES: protein motif:HMM:NF024803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEX6669026.1"
                     /translation="MSTARPVQEFYSIGEVCALTDLKPHVLRYWESQFRFLNPAKNRS
                     GNRVYKGKEVELIMLVKHLLYTEKYTIDGARQRIDQYRRSGELKTSAHRAFEAEVAAE
                     ARVELETVLAILDGKAPPTLPPPPAPPPHAAPRGGAGARGGKSGR"
     gene            514..1263
                     /gene="surE"
                     /locus_tag="VF061_05690"
     CDS             514..1263
                     /gene="surE"
                     /locus_tag="VF061_05690"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008252 - nucleotidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HEX6669027.1"
                     /translation="MNILVTNDDGILAPGLALLADVCREVANVTVVAPDREQSGTSHS
                     LTLHRPLRPARRPDGAWQIDGTPTDCAMLAIQALMPERPDFVFSGVNHGPNMGEDVLY
                     SGTVAAAMEAVTLGVPGIGISFSGNHPETMATYRELLLQLVRRIVEVPSFPEQTLLNI
                     NLPKIPASDVRGIQVTKLGSRFFSESLTRMKDPWGREIYWIGGGTITWTGGENSDHLA
                     VAEGYISVTPLHMDLTNYSLIETVRGWSLEG"
     gene            1245..1907
                     /locus_tag="VF061_05695"
     CDS             1245..1907
                     /locus_tag="VF061_05695"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004719 - protein-L-isoaspartate
                     (D-aspartate) O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HEX6669028.1"
                     /translation="MVAGGVGEGDGYGGYRAQLVETLQRKGIRDLAVLRAVRMVPRHL
                     FVPESVRHRAYDDAALPIGSNQTISQPWVQARYLELLALGGRERVLEIGTGSGYQTAL
                     LAMLCDAVFSVERIPALAQRARETLAAAGIRNVTVLVGDGTLGWRPFAPYDAILVAAA
                     SPEIPAPLVEQLAPGGRMVIPLGDRANQVLTLVRREGDQLLTTTVADVRFVPLLGEFG
                     FR"
     gene            1924..2565
                     /locus_tag="VF061_05700"
     CDS             1924..2565
                     /locus_tag="VF061_05700"
                     /inference="COORDINATES: protein motif:HMM:NF008102.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEX6669029.1"
                     /translation="MEFVRSVMDLFLHLDQHLHRIVSDYGVWTHLILFAIVFAETGLV
                     VTPFLPGDSLLFAAGALAALGSLDLWLLVVLLIGAAILGDTVNYWVGAWIGPRAFSGN
                     VKFLRKDYLERTHAFYEKHGGKTIILARFVPIIRTFAPFVAGVGAMSYPKFITYNVVG
                     AVLWVGLFVPAGYFFGNMPTVKENFSLVILAIIALSVLPIGVEAIRARRSRPA"
     gene            2562..2831
                     /locus_tag="VF061_05705"
     CDS             2562..2831
                     /locus_tag="VF061_05705"
                     /inference="COORDINATES: protein motif:HMM:NF012911.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HEX6669030.1"
                     /translation="MTTRFLVSGLVQGVGFRWFVARHARALGLGGYARNLPDGRVEVV
                     ASGGASDALARLEELLRAGPAHARVERLDRQEVDEPVSERSFDIR"
     gene            2828..>3185
                     /locus_tag="VF061_05710"
     CDS             2828..>3185
                     /locus_tag="VF061_05710"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: protein motif:HMM:NF002636.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003999 - adenine
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HEX6669031.1"
                     /translation="MRSPPTLDHRIRDALRPIQDYPKPGIVFQDITPVLADAALLHDV
                     VAAMARPFAGSEVTHVVGIEARGFILGGAVATNLRAGFVPVRKPGKLPWERVTEEYAL
                     EYGTDALECHSDGLAPG"
BASE COUNT          465 a         1097 c         1131 g          492 t
ORIGIN      
        1 ctcaaatcgg agcaatggcg atgagcaccg cccgtcccgt gcaggagttc tactcgatcg
       61 gcgaggtctg cgcgctgacc gacctgaagc cccacgtcct gcgctactgg gagagccagt
      121 tccgctttct caaccccgcg aagaaccgct cgggcaaccg ggtgtacaag gggaaggaag
      181 tggagctgat catgctggtg aagcacctgc tctataccga gaagtacacc atcgacggcg
      241 cccggcagcg catcgaccag taccgccgca gcggcgagct caagaccagc gcccaccggg
      301 cgttcgaggc ggaggtcgcg gcggaggccc gggtcgagct ggagacggtg ctcgcgatcc
      361 tggacggcaa ggccccaccg accctcccgc cgccgccggc gccgccgccg cacgcggcgc
      421 cgcgaggcgg ggcgggggcc cgcggcggga agagcggccg gtagcgcgcg cccgctgccc
      481 cgccgggcgg gcgcccggct atctttgccc cccatgaaca tcctggtcac caacgacgac
      541 ggcatcctcg ctccggggct ggcgttgctc gccgacgtct gccgggaggt ggccaacgtg
      601 accgtggtgg cgccggaccg ggagcagagc ggcacctcgc actcgctcac gctgcaccgg
      661 ccgctgcgac cggcgcggcg gccggacgga gcctggcaga tcgacggcac gccgaccgac
      721 tgcgcgatgc tggcgatcca ggcgctgatg ccggagcgtc ccgacttcgt cttctcgggc
      781 gtgaaccacg ggcccaacat gggagaggac gtgctgtact cgggcaccgt ggccgcggcg
      841 atggaggcgg tcaccctggg cgtgcccggc atcggcatct cgttctcggg aaatcatccg
      901 gagacgatgg ccacgtaccg cgagctgctg ctgcagctgg tgcgccggat cgtcgaggtg
      961 cccagctttc cggagcagac cctgctcaac atcaacctgc cgaagattcc ggcctcggac
     1021 gtgcgcggca ttcaggtcac caagctcggg agccgcttct tctccgagtc gctcacccgg
     1081 atgaaggacc catggggacg cgagatctac tggatcggcg gggggacgat cacctggacc
     1141 ggcggcgaga actcggacca cctcgccgtg gcggagggct acatctcggt cacgccactc
     1201 cacatggatc tcaccaacta ctcactgatc gagaccgtgc gcggatggtc gctggagggg
     1261 taggggaggg ggacgggtac ggcgggtacc gcgcccagct ggtcgagacc cttcagcgga
     1321 agggcattcg cgacctggcg gtgcttcgcg ccgtgcgcat ggtgccgcgc cacctgttcg
     1381 tcccggagag cgtgcggcat cgggcgtacg acgatgccgc gctcccgatc gggagcaacc
     1441 agacgatctc ccagccctgg gtccaggccc gctacctgga gctgctggcc ctcggcggcc
     1501 gggagcgcgt gctggagatc ggcacgggct cggggtatca gaccgccttg ctcgcgatgc
     1561 tgtgcgacgc cgtcttcagc gtggagcgga tcccggcgct ggcgcagcgg gcgcgggaga
     1621 cactcgccgc ggcaggcatc aggaacgtca ccgtgctggt aggcgacggc accctgggct
     1681 ggcgcccttt cgcgccgtac gacgcgatcc tggtcgcggc cgcctccccc gagatccccg
     1741 cgccgctggt ggagcagctc gcccccggcg gccggatggt gatcccgctc ggcgatcggg
     1801 ccaaccaggt cctcaccctg gtccgccggg agggcgacca gctgctgacc accaccgtgg
     1861 ccgatgtgcg gttcgtcccg ctgctcggcg aattcggctt ccgctagccc ccggagaccc
     1921 ggcatggaat tcgtgcggtc cgtcatggac ctcttcctcc acctcgacca gcacctccac
     1981 cggatcgtca gcgattacgg tgtctggacg cacctgattc tgttcgccat cgtgttcgcc
     2041 gagaccgggc tggtggtgac gccgttcctg ccgggagact cgctgctctt cgcggccggc
     2101 gcgctcgccg ccctgggctc gctggacctc tggctgctgg tcgtgctgct gatcggcgcg
     2161 gcgatcctgg gggacacggt gaactactgg gtgggggcct ggatcgggcc gcgggccttc
     2221 agcggcaacg tgaagtttct gcgcaaggat tacctggagc gcacccacgc gttctacgag
     2281 aagcacggcg gcaagacgat catcctggcc cggttcgttc ccatcatccg gaccttcgcg
     2341 ccgttcgtgg ccggggtagg ggcgatgagc tatcccaaat tcatcaccta caacgtggtc
     2401 ggcgcggtgc tgtgggtggg gttgttcgtc cccgcgggct acttcttcgg caacatgccc
     2461 acggtgaagg agaacttcag cctggtcatc ctcgcgatca tcgccctctc ggtgctgccg
     2521 atcggggtgg aggcgatccg cgcccgccgg agccgcccgg cgtgaccacc cggttcctcg
     2581 tctcgggcct ggtgcagggg gtcggcttcc gctggttcgt ggcccggcac gcccgcgccc
     2641 tcggcctcgg cggctatgcg aggaatctgc cggacggacg ggtcgaagtg gtggcctccg
     2701 gcggtgcctc ggatgcgctc gcccgactgg aagagctgct ccgggcgggt ccggcgcatg
     2761 cgcgggtgga acggctggat cgtcaggagg tggacgaacc ggtttccgag aggagcttcg
     2821 acatccgatg agatcgccac cgaccctgga ccaccgaatc cgcgacgcgc tccggccgat
     2881 ccaggactac ccgaagccgg gcatcgtctt ccaggacatt accccggtgc tggccgacgc
     2941 cgccctcctg cacgacgtgg tcgccgccat ggcccgcccc ttcgccggca gcgaggtgac
     3001 ccacgtggtg gggatcgagg cccggggatt catcctcggc ggggcggtgg ccaccaacct
     3061 gcgcgcgggc ttcgtgccgg tgcgaaagcc gggcaagctg ccgtgggagc gggtgacgga
     3121 ggagtacgcc ctggagtacg ggacggacgc cctggagtgc cacagcgacg gcctggcgcc
     3181 gggac
//
LOCUS       DASUYN010000286         5782 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_313851, whole genome shotgun sequence.
ACCESSION   DASUYN010000286 DASUYN010000000
VERSION     DASUYN010000286.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5782)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5782)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5782
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_313851"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..523
                     /locus_tag="VF061_05715"
     CDS             <1..523
                     /locus_tag="VF061_05715"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX6669032.1"
                     /translation="KGFWPDVVFTAQQAGQLGLPAIMAAVRTVRPNVPVILLAEPGDE
                     HLTAAWIRAGVEEVVRRDAIGQAAEALQRALEVRQPLSRLSPRQLEVLRLITEGLTSR
                     EIAARLELSEKTVETHRSAVAQRLGIRDVAGLVRYAVRVGLTSLAPPFDSRRREAGAG
                     LAASRSASSFPSD"
     gene            complement(535..1503)
                     /locus_tag="VF061_05720"
     CDS             complement(535..1503)
                     /locus_tag="VF061_05720"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone oxidoreductase"
                     /protein_id="HEX6669033.1"
                     /translation="MKAIRVQSTGGPEVLRLEDVPTPEPGPGQLLLRVEAAGVNFIDV
                     YQRKGLYRLPLPFTPGREAAGVVERVGAGVTTLKPGDRVVSETVAGGYAEFTVVAAER
                     AVPLPDGLDTRVAAAVMLQGLTAHYLAFSTYPLRPGDTCLVHAAAGGVGLLLCQIASR
                     LGARVIGTAGSEDKARLAREAGAAEVILYDEADFLEETRRLTGGAGVQVVYDSVGRTT
                     FLKGLDCLAPRGTMVLYGQSSGPVEPIDPQLLNQKGSLYLTRPTLAHYVHTRSELVRR
                     TDELLGWVRDGSLRVRIGREFPLASAAEAHAELEGRRTTGKVLLAP"
     gene            complement(1519..2124)
                     /locus_tag="VF061_05725"
     CDS             complement(1519..2124)
                     /locus_tag="VF061_05725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669034.1"
                     /translation="MSRNDSPTDNDPQETTSRTVVGLFSHRAAAEAAILDLTASGFAE
                     DRIGVAMQERATQGDLLEDIGGEPAEGAAKGAVSGGVVGGLVGLLGSLLIPGLGPVLA
                     GGVLASTLAGIGIGAATGGLLGALIGLGVPEEDARHFDRGFREGGTLVTVDAGARTPE
                     ALAILARHEVDLGPSGPVRYGDRRVGLDPAYAGPERRLAGV"
     gene            complement(2136..3392)
                     /locus_tag="VF061_05730"
     CDS             complement(2136..3392)
                     /locus_tag="VF061_05730"
                     /inference="COORDINATES: protein motif:HMM:NF016032.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0042398 - cellular modified amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-cysteine ligase family protein"
                     /protein_id="HEX6669035.1"
                     /translation="MSSGLRAALEADLAARAFAAPPGASLTPRRVGAEVELIPLEVAT
                     GRRCGLEPGPTPGTLPLLRRFGVRQGWRETRTAKGTPSFTLPDGGTLTFEPGGQLEYS
                     SPPCRSPSALLGLLRAVVLPLRAAAANEGIELAAVGLDPCNSAEGAPLLLQTPRYSRM
                     AEYLADIGPSGARMMRQTAAFQIGLDLDDEPSLRWTVLNAAAPIAVAIFANSPVYEGA
                     PTGCRSTRAEVWRTLDPARTGLPWDDRDPIGRYCDFALRAPAILLPELEGEHRPFGEW
                     LQHARPTLEEWREHLSTLFPEVRPRGHLELRSCDAVPPQWYAAPLALAVGITYDPWAL
                     RSAADLLGRPDPGLLHRAGRVGLTDPAIRRTAVDLADIAIAGCEHLGPAYFHPSDLEQ
                     ARQFFDQYTRRGRSPADDLEGAEIAA"
     gene            complement(3389..4348)
                     /gene="egtD"
                     /locus_tag="VF061_05735"
     CDS             complement(3389..4348)
                     /gene="egtD"
                     /locus_tag="VF061_05735"
                     /EC_number="2.1.1.44"
                     /inference="COORDINATES: protein motif:HMM:TIGR03438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030745 - dimethylhistidine
                     N-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0052699 - ergothioneine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-histidine N(alpha)-methyltransferase"
                     /protein_id="HEX6669036.1"
                     /translation="MRRPLARESVADPRMLAEVADGLSRPQKELSPKYFYDQRGSELF
                     EEITRLEEYYPTRTERALLEAWMPSLIRRLGTRALVELGAGSAEKSRVILDAMRAAGT
                     AELYVPIDVSATFLSQTAARLRREYPRLTVEPAIADISEELSLPRRLPRPTLFAFLGS
                     TIGNFYPPAAIRLLARIRAAMEPGDRFLMGVDLRKDVARIEAAYNDAGGVTAAFNRNM
                     LLVLNHELGADFDPQAFDHRAFYEPVAHRIEMHLVAREPQEVTIPGMEAVRFERGESL
                     RTEISCKHDRESVAQLFEAAGLELDQWRGDPESLFALVVGVGV"
     gene            complement(4341..5660)
                     /gene="egtB"
                     /locus_tag="VF061_05740"
     CDS             complement(4341..5660)
                     /gene="egtB"
                     /locus_tag="VF061_05740"
                     /inference="COORDINATES: protein motif:HMM:TIGR03440.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0052699 - ergothioneine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ergothioneine biosynthesis protein EgtB"
                     /protein_id="HEX6669037.1"
                     /translation="MTMTAAPARELRQRLVTELEEARARTLLLVAPLSDEDLHAQHDP
                     LMSPILWDLGHIAHFEELWLTRNLDGPIEFVEMPGLYNPFEHPRSARGALPLPGLDRV
                     REVMNEIRARVLARLQSADFDADQPLLAGGYAYRMVLQHEYQHNETILQTLQLKQGAP
                     YSPPARVAPPLVGEGLPSTGMVRFPGGRVEIGTDDRAEAYDNERPSHVVEVRPFDIDV
                     HPVTGGQYLEFIEAGGYGRAELWSSAGRRWLAESGAEAPKYWFHSRDGWMTRVMDRVG
                     PMEPDHPVCHVCWHEAEAFARWAGKRLPTEIEWEAAASWDPETGRKRRYPWGDAPPSR
                     ELANLDQLGFGTAPVAAYPGNRSPVGCRGMIGDVWEWTSSDFGPWPGFDAFPYPEYSE
                     VFFGSEYKVLRGGSWATRPGAVRNTFRNWDYPIRRQIFSGFRCARDA"
BASE COUNT          812 a         2086 c         2102 g          782 t
ORIGIN      
        1 gaagggcttc tggcccgatg tggtcttcac tgcgcaacaa gccggccagc tgggcctgcc
       61 ggcgatcatg gccgccgtgc gaaccgtccg gcccaacgtg ccggtgatcc tgctggcgga
      121 gcccggcgac gagcacctga ccgcggcctg gatccgggcg ggtgtcgagg aagtggtacg
      181 gcgggacgcc atcggtcagg cggcggaggc gctccagcgc gccctcgaag tccggcagcc
      241 cctctcgcgc ctcagcccgc gccagctcga agtgctgcgg ctcatcaccg aggggctgac
      301 cagccgggag atcgccgccc ggctcgagct cagcgaaaag acggtagaga cccaccggag
      361 cgccgtggcc cagcggctcg gcatccggga cgtggcgggg ctggtgcgct acgcggtgcg
      421 ggtcggcctc acctcgctgg cgccgccgtt cgacagccgg cgtcgagagg cgggcgccgg
      481 gctcgccgcg agtcgctcgg catccagctt tcccagcgac tgacgccgga tccctcaagg
      541 ggcgaggagg accttcccgg tcgtccttcg cccctcgagc tccgcgtggg cctccgccgc
      601 ggaagccagg ggaaactccc tcccgattct cacccgaagt gagccgtccc gcacccagcc
      661 cagcagctcg tccgtcctcc gcaccagctc gctccgagtg tgcacgtagt gcgccagggt
      721 gggccgggtg aggtagagcg agcccttctg gttgaggagc tgcggatcga tcggctcgac
      781 cggtccgctc gactgcccgt agagcaccat cgtgcctcgc ggcgccaggc aatcgaggcc
      841 cttgaggaac gtggtccgtc ccaccgagtc gtacaccacc tgcacgccgg cgccgccggt
      901 cagccgcctc gtctcctcga ggaaatccgc ctcgtcgtag aggatgacct ccgccgcgcc
      961 ggcttcccgg gcgagccggg ccttgtcctc gctgccggcg gtaccgatca cgcgcgcgcc
     1021 gagacggctc gcgatctggc agaggaggag ccccacgcct ccggccgccg cgtgcaccag
     1081 gcaggtgtcg ccggggcgca ggggataggt gctgaaggcg agataatgtg cggtgagtcc
     1141 ctggagcatg accgcggcgg cgacgcgggt atccagacca tccggcagtg gcacggcccg
     1201 ctcggcggcg accacggtga actccgcgta gccgccggcc accgtctccg agaccacgcg
     1261 gtcaccgggc ttcagggtgg tgactccggc gccgacccgc tccaccaccc cggccgcctc
     1321 tcgccccggc gtgaacggca gcggaagccg gtagagcccc ttccgttggt agacgtcgat
     1381 gaagttgacc cccgccgctt cgacccggag aagcagttgt ccgggaccgg gctcgggcgt
     1441 gggcacgtcc tcgaggcgca ggacctcggg cccgccggtg gactgaacgc gaatggcttt
     1501 cacgctgctc cgtccagctc agaccccggc cagccgtcgc tccggaccgg cgtacgcagg
     1561 gtcgagtccc acgcgccggt cgccgtagcg gacggggccg ctcggcccca ggtccacctc
     1621 gtgccgggcc aggatggcga gggcttcggg cgtccgcgca ccggcgtcca ccgtcaccag
     1681 ggtacctccc tcacggaagc cccgatcgaa gtgccgcgcg tcctcctcgg gaacgcccag
     1741 gccgatgagc gcgcccagga ggccgccggt cgccgcgccg atgccgatgc cggccagggt
     1801 ggaggcgagg acgccgccgg cgagaacggg accgagcccc gggatcagca gggagccgag
     1861 gaggcccacc agcccgccga ccacgccgcc actcaccgcg cccttcgcgg cgccttccgc
     1921 cggctcaccg ccgatgtcct cgagcaggtc gccctgggtc gcccgctcct gcatggcgac
     1981 cccgatgcga tcctccgcga agccggaagc ggtgagatcg aggatcgcgg cttccgccgc
     2041 cgcgcgatgg ctgaacaggc cgaccacggt gcggctcgtg gtctcctgcg ggtcgttgtc
     2101 ggtgggactg tcgttccggc tcatggcgtc gctcctcagg ccgcgatctc ggctccctcg
     2161 agatcgtccg cgggcgagcg gccgcggcgg gtgtactgat cgaagaactg gcgggcctgc
     2221 tccaggtcgg agggatggaa gtacgccggt ccgaggtgct cgcagccggc gatcgcgatg
     2281 tcggccaggt ccacggcggt ccgccggatc gccgggtcgg tcagccccac gcggcccgcc
     2341 cgatgcagca ggccgggatc ggggcggccg agcagatccg ccgcggagcg cagcgcccag
     2401 ggatcgtagg tgatgccgac ggcgagcgcg agcggcgcgg cgtaccactg gggcggtacc
     2461 gcgtcgcagg agcgcagctc caggtgccct cgcggccgga cttcggggaa cagcgtgctc
     2521 aggtgctctc gccattcctc gagggtgggc cgcgcgtgct gcagccattc gccgaagggc
     2581 cgatgctcgc cctccagctc cggcaacagg atggcgggcg cacggagcgc gaagtcgcaa
     2641 taccgcccga tcgggtcgcg atcgtcccag ggcaggccgg tccgagcggg atcgagggtg
     2701 cgccacacct cggcccgggt gctgcggcac ccggtgggcg caccctcgta caccggtgag
     2761 ttcgcgaaga tggcgacggc gatcggcgcc gccgcgttca ggacggtcca gcgcaacgac
     2821 ggctcgtcgt ccaggtcgag accgatctgg aaggccgcgg tctgccgcat catcctcgcg
     2881 cccgaggggc cgatgtcggc gaggtactcc gccattcggg aataccgcgg cgtctggagc
     2941 aggagcggtg caccctcggc ggagttgcag gggtcgaggc ccaccgcggc cagctcgatt
     3001 ccttcgttcg cggcggccgc gcggagcggc agcaccaccg cgcgcaggag cccgagcagc
     3061 gcgctggggg accggcaggg cggcgagctg tactccagct gaccgccggg ctcgaacgtg
     3121 agggtgcccc catcgggcag ggtgaacgag ggcgtgccct tggccgtcct ggtctcccgc
     3181 cagccctggc ggaccccgaa ccggcgcagc agcggcagcg tccccggcgt ggggcccggc
     3241 tccagcccgc agcggcggcc ggtcgccacc tccagcggga tcagctccac ctcggcgccc
     3301 acccgccgcg gcgtgagcga ggcgccgggc ggcgccgcga aggcgcgggc cgcgaggtcg
     3361 gcctcgagcg ccgcgcggag ccccgagctc acacgccgac cccgaccacg agcgcaaaca
     3421 gcgactcggg gtcgccgcgc cattggtcca gctccagccc cgcggcctcg aagagctgcg
     3481 ccacactctc gcggtcgtgc ttgcagctga tctcggtgcg gagcgactcg ccccgctcga
     3541 agcgcaccgc ctccatcccg gggatcgtca cctcctgggg ctcccgcgcc accaggtgca
     3601 tctcgatgcg gtgcgccacc ggctcgtaga acgcgcggtg gtcgaaggcc tggggatcga
     3661 agtccgcgcc cagctcgtgg ttgagcacga ggagcatgtt gcggttgaat gcggcggtga
     3721 cccccccggc atcgttgtag gcggcctcga tccgggcgac gtccttgcgg aggtccacgc
     3781 ccatgaggaa ccggtcgccg ggctccatgg ccgcgcggat ccgcgcgagc agccggatcg
     3841 ccgcgggcgg atagaagttg ccgatggtgc tgccgaggaa ggcgaagagc gtcggccggg
     3901 gcagccggcg ggggaggctc agctcctcgg agatgtcggc gatggcgggc tccaccgtga
     3961 gccgggggta ctcccgccgg agcctcgcgg cggtctggct gagaaacgtg gcgctcacgt
     4021 cgatcgggac gtacagctcc gccgtcccgg cggcgcgcat cgcgtcgagg atcacgcggc
     4081 tcttctccgc gcttcccgcg ccgagctcca ccagggcgcg ggtgccgagt cgccggatca
     4141 gcgaaggcat ccacgcctcg agcagcgcgc gctcggtacg ggtcgggtag tactcctcca
     4201 gccgggtgat ctcctcgaac agctccgagc cgcgctggtc gtagaagtac ttgggcgaca
     4261 gctccttctg gggccgggag agcccgtcgg ccacctccgc gagcatgcgc ggatcggcga
     4321 ccgactcgcg ggcgagcggt ctacgcatca cgggcgcacc tgaagccgct gaagatctgg
     4381 cggcggatgg ggtagtccca gttgcggaag gtgttgcgca ccgcacctgg gcgggtggcc
     4441 cacgagcccc cgcgaaggac cttgtactcg ctgccgaaga agacctccga gtattccggg
     4501 taggggaacg catcgaaccc gggccagggg ccgaagtcgc tcgacgtcca ctcccacaca
     4561 tcgccgatca tgccccggca gccgaccggg gagcggttgc ccgggtacgc ggccaccggg
     4621 gcggtgccga acccgagttg gtccaggttg gccagctcgc gggacggagg cgcgtcgccc
     4681 caggggtagc ggcgcttgcg gccggtctcg ggatcccagg acgccgccgc ctcccactca
     4741 atctccgtcg gcagacgctt cccggcccag cgggcgaacg cttcggcctc gtgccagcac
     4801 acgtggcaga cggggtggtc cggctccatg gggccgacgc ggtccatcac ccgcgtcatc
     4861 cagccgtccc ggctgtggaa ccagtacttc ggcgcctccg cgccggactc cgccagccag
     4921 cggcgacccg cgctcgacca gagctcggcc cgaccgtatc cgccggcctc gatgaactcg
     4981 agatactggc cgccggtgac cgggtgtacg tcgatgtcga acggccgcac ctccacgacg
     5041 tggctgggcc gctcgttgtc gtacgcctcg gcccggtcgt cggttccgat ctcgacccgg
     5101 ccgccgggaa accggaccat gccggtgctc ggcaggccct cgccgacgag aggcggcgcg
     5161 acccgcgcgg gcggcgagta gggcgcgccc tgcttgagct gcagggtttg gagaatggtc
     5221 tcgttgtgct ggtactcgtg ctggagcacc atccggtacg cgtagccgcc cgccaggagg
     5281 ggctgatcgg cgtcgaagtc ggccgactgc agccgggcga gcacccgggc gcggatctcg
     5341 ttcatcacct cgcggacccg atccagcccc gggaggggca gcgcgccgcg ggcgctgcgc
     5401 ggatgctcga acgggttata gagcccgggc atctcgacga actcgatggg gccgtcgagg
     5461 ttgcgggtga gccacagctc ctcgaagtgc gcgatgtgcc cgaggtccca caggatcggg
     5521 ctcatcaggg ggtcgtgctg ggcgtgcagg tcctcatcgc tgaggggggc caccagcagc
     5581 agggtcctcg ccctggcctc ctccagctcg gtcaccagtc gctgccggag ctcgcgcgcc
     5641 ggcgctgcgg tcatcgtcat cacggctccc cgcccgacga gtcagtcgag cgtcgagaac
     5701 aggttgttca acgcctccgc cagggtgggg tgggcgaaga cggcgtcccg gagcttatca
     5761 tacggcagac cgcccatcat gg
//
LOCUS       DASUYN010000287         2072 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1415038, whole genome shotgun sequence.
ACCESSION   DASUYN010000287 DASUYN010000000
VERSION     DASUYN010000287.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2072
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1415038"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..822)
                     /locus_tag="VF061_05745"
     CDS             complement(<1..822)
                     /locus_tag="VF061_05745"
                     /inference="COORDINATES: protein motif:HMM:NF019403.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heparan-alpha-glucosaminide N-acetyltransferase
                     domain-containing protein"
                     /protein_id="HEX6669038.1"
                     /translation="MSTVLQPDTPSGAYRVRRTTSVTRRSVPPPPQEPTRRRLDHVDL
                     LRGLVMVIMVLDHVRAYFTEARFDPTDLTRTDLALFGTRWITHYCAPVFVFLAGASAW
                     IAGTRRTRGELSRFLLTRGLWLIFLELTVITFAWYFTTELALGLVAQVIWAIGASMVV
                     LAGLIHLPRAAVAGFGAALVLGHNLLDGVTPERFGALAPLWRMLYVPGPLEVVPVFLL
                     YPLVPWVGVMALGYAAGTLVLARDERAGRRLALAGLALTAGFVLLRTLDLYGDPSP"
     gene            1079..>2072
                     /locus_tag="VF061_05750"
     CDS             1079..>2072
                     /locus_tag="VF061_05750"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX6669039.1"
                     /translation="MTDRSPDAAGTPWLGWVDTAALLNQAQAYEQSGSLRHAEAAYNS
                     LIVAATRQKDHATLAVAFRRRAVLAHQAGDASRARSALQQSYAVATMLGDRRLTAETL
                     NTLGGLELETRNLAAAESALLEAEALASADPTILARVEQNLGIVANIRGEHDVAEGHY
                     RRSLAAYEALPDPHGSALAHHNLGMLAADREDYGVASEHFAACEELAEASRDAHLVAL
                     CLLNHAEVLVALKRPGEARREAEAAERAFQALGAHFDAADVHRVLALCDRAEGLLRQA
                     ETRLEQARELSRLTGARLTEAEVLRDLGRVCAETGRSGEAVALLREAAQVFAGLG"
BASE COUNT          321 a          634 c          877 g          240 t
ORIGIN      
        1 gggcgagggg tcgccgtaca ggtccagggt ccggaggagg acgaagcccg cggtgagcgc
       61 caggccggcg agcgcgaggc gccggccggc tcgctcgtcc cgggccaaga ccagagtgcc
      121 cgcggcgtag cccagggcca tcacgccgac ccagggaacc agcggataca gcaggaagac
      181 cggcaccacc tcgagcggtc cggggacgta cagcatccgc cagagcggcg cgagcgcgcc
      241 gaaccgctcg ggggtgacgc cgtccaggag attgtgaccg agcacgaggg ccgcgccgaa
      301 gccggcgacg gcggctcgcg gcaggtggat caagccggcg agcaccacca tcgaggcgcc
      361 gatcgcccag atgacctggg ccacgaggcc gagcgcgagc tcggtggtga agtaccaggc
      421 gaaggtgatg acggtgagct cgaggaagat cagccacagc ccgcgggtca ggaggaagcg
      481 gctcagctcg ccgcgggtgc ggcgggtgcc ggcgatccac gcactggcac cggcgaggaa
      541 gacgaaaacc ggcgcgcaat agtgggtaat ccagcgggtg ccgaagaggg cgagatcggt
      601 ccgggtgagg tcggtcgggt cgaaccgggc ctcggtgaag taggcgcgga cgtggtcgag
      661 caccatgatg accatgacca ggccgcgcag caggtctacg tggtcaagcc gccggcgggt
      721 cggctcctgc ggcgggggag ggacggaccg ccgggtgacg gacgtggtcc tgcggacgcg
      781 gtacgcgccg gacggggtgt cgggttggag caccgtgctc atggcacacc tgctgaaagt
      841 ggaggctgag ggccggacac caccgattgc ggggaggcgg gtcgggagcg gacagcgatc
      901 gggggcggga gcggcaaaat ttgccggtct ggggtgccga aagtgtcata gttctggtcg
      961 gcatccaaaa tgggaacgct tgaccgcgtg caccccgggc cctaccgtgg cgggttggcc
     1021 ttctgttccc tctcgcccca tcccctcgga ggcggcctct gcgccgaccg ctcgccccgt
     1081 gacggaccga tctccggatg ccgccggcac gccctggctg gggtgggtgg acaccgccgc
     1141 cctgctgaac caggcgcagg cgtacgagca gtccggctcc ctgcggcacg cggaggcggc
     1201 gtacaactcg ctgatcgtcg cggcgacccg gcagaaggac cacgccaccc tggcggtggc
     1261 gttccggcgg cgggcggtgc tggcgcacca ggcgggggat gcgtcgcggg cgcggagcgc
     1321 gctgcagcag agctacgccg tggcgacgat gctaggggac cgccggctga cggcggagac
     1381 actcaacacg ctcggcgggc tggagctgga gacgcgcaac ctggcggcgg cggagtcggc
     1441 gctgctggag gcggaggcgc tggcgagcgc ggatcccacc atcctggccc gggtggagca
     1501 gaacctgggc atcgtggcga acatccgggg cgagcacgac gtggcggagg ggcattaccg
     1561 gcggtcgctg gcggcgtacg aggcgctgcc ggacccgcac ggcagcgcgc tcgcgcacca
     1621 caacctcggg atgctggcag cggaccggga ggactacggg gtcgcgtcgg agcacttcgc
     1681 tgcctgcgag gagctggcgg aggcgagccg ggacgcccac ctggtggcgc tgtgcctgct
     1741 gaatcacgca gaggtgctgg tggcgctgaa gcggccgggg gaggcgcggc gggaggcgga
     1801 ggcggcggag cgggcgttcc aggcgctggg ggcgcacttc gacgcggcgg acgtgcaccg
     1861 ggtgctggcg ctgtgcgacc gcgcggaggg gctgttgcgg caggcggaga cgcggctgga
     1921 gcaggcgcgg gagctgtcgc ggctcacggg ggcgcggctg acggaggccg aggtgctccg
     1981 ggatctgggg cgggtgtgcg cggagaccgg gcgatcggga gaggcggtgg cgctgttacg
     2041 tgaggcggca caggtgtttg cggggctggg gg
//
LOCUS       DASUYN010000288         2245 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1856663, whole genome shotgun sequence.
ACCESSION   DASUYN010000288 DASUYN010000000
VERSION     DASUYN010000288.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2245)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2245)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2245
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1856663"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..244)
                     /gene="pqqD"
                     /locus_tag="VF061_05755"
     CDS             complement(<1..244)
                     /gene="pqqD"
                     /locus_tag="VF061_05755"
                     /inference="COORDINATES: protein motif:HMM:TIGR03859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis peptide
                     chaperone PqqD"
                     /protein_id="HEX6669040.1"
                     /translation="MSTSWRSVMNPDSVPSLWRLARIDFDAVRNRPVLLYPEGAVLLN
                     DTGRAILELVDGRRTIREIAGILGERYQTDVTADVTE"
     gene            complement(241..996)
                     /gene="pqqC"
                     /locus_tag="VF061_05760"
     CDS             complement(241..996)
                     /gene="pqqC"
                     /locus_tag="VF061_05760"
                     /EC_number="1.3.3.11"
                     /inference="COORDINATES: protein motif:HMM:TIGR02111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline-quinone synthase PqqC"
                     /protein_id="HEX6669041.1"
                     /translation="MTATLPGSRLSAPPRPPIPELERPLSPTELEEALRSFSGSYYVE
                     HPFHRLMYAGQLSQRQFQGWVANRLAYQRVVPRKDAAILSNCPDPAVRREWIQRILDH
                     DGTEAGTGGIELWIRLGVALGVPREEMEDERHVLPAARLICESYVHFCRTKPWVEAVA
                     SSLTELFAPKIHQQRIEAFPKHYPWIPPEALDYFKSRLVQAPRDVRHGLAIVQQHCTT
                     VDTQLGAFRALAFKLEMLWALIDTIHHAYAETA"
     gene            complement(1016..1912)
                     /gene="pqqB"
                     /locus_tag="VF061_05765"
     CDS             complement(1016..1912)
                     /gene="pqqB"
                     /locus_tag="VF061_05765"
                     /inference="COORDINATES: protein motif:HMM:TIGR02108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis protein
                     PqqB"
                     /protein_id="HEX6669042.1"
                     /translation="MLGTAAGGGFPQWNCWCPTCRTARREPARAHPRSQSSAAVSADG
                     RRWFLLDASPDVHAQLARLPGTEPTGMRHQPVEGVVLTDAELDHTLGVVLLREGRHLQ
                     VYATPAVQHMLEHDSRLLPVTRAFAEVRLESLAIEGATALVYRDGCPAGLTVTAFPVP
                     AGPPRFASQELAGHTVGLLVRDETTGGVCAFVPGCGGLDRALLDRLAAAELVLFDGTF
                     WTDEELITLGIGERTARQMDHLPVSGPDGSLERLATLPGRHKVYTHINNTNPMLVEDS
                     PQRLLVQRLGLAVGADGMRFTL"
BASE COUNT          345 a          736 c          829 g          335 t
ORIGIN      
        1 actcggtgac gtcggcggtg acgtcggtct gataacgctc gcccaggatg ccggcgatct
       61 cccggatggt acggcgtccg tccaccagct cgaggatcgc cctcccggtg tcgttgagca
      121 gcacggcgcc ctccgggtac aggagcaccg gccggttgcg cacggcatcg aagtcgatcc
      181 gggcgagccg ccacagcgag ggtaccgagt ccgggttcat gaccgacctc cagctcgtgc
      241 tcacgcggtc tccgcatacg catggtggat cgtgtcgatc agcgcccaca gcatctccag
      301 cttgaacgcc agcgcccgga acgcgccgag ctgggtgtcc accgtggtgc agtgctgctg
      361 cacgatcgcg aggccgtggc gtacgtcgcg cggggcctgg acgaggcggc tcttgaaata
      421 gtccagcgcc tccggcggga tccacgggta gtgcttcgga aacgcctcga tgcgctgctg
      481 gtgaatcttc ggcgcgaaca gctcggtgag cgaggacgcc accgcctcca cccacggctt
      541 cgtccggcag aagtgcacgt aggactcgca gatcagccgc gccgcgggca gcacgtgccg
      601 ttcgtcctcc atctcctccc ggggcacgcc gagggcgacg ccgagccgga tccacagctc
      661 gatgccgccg gtgccggctt cggtgccgtc gtgatcgagg atccgctgga tccattcgcg
      721 ccgcaccgcg ggatcgggac agttggagag gatcgccgcg tccttccgcg gcaccacccg
      781 ctggtaggcc agtcggttcg ccacccagcc ctggaattgc cgctgggaga gctgcccggc
      841 gtacatcagg cggtgaaagg ggtgctcgac gtaataggat ccgctgaacg accgcagcgc
      901 ctcctccagc tcggtgggcg agagcggacg ctcgagctcg gggatcgggg gccggggcgg
      961 cgcggagagt cgggagccgg gcagggtcgc ggtcatgggc gaaagctagt cgtcctcaga
     1021 gagtgaaccg catgccgtcg gcgccgacgg cgaggccgag acgctgcacc aggagccgct
     1081 gcggcgagtc ctcgaccagc atggggttgg tgttgttgat gtgggtgtac accttgtgcc
     1141 gccccgggag ggtggcgaga cgctccaggc tcccgtccgg gccggagacc ggcaggtggt
     1201 ccatctgccg cgccgtgcgc tcccctatgc ccagggtgat cagctcctcg tcggtccaga
     1261 aggtgccgtc gaacaggacc agctccgcgg cggcgaggcg gtcaagcagc gcgcggtcga
     1321 gcccgccgca accgggaacg aaggcgcaca cgccgccggt cgtttcgtcg cgcaccagca
     1381 gccccacggt gtgacccgcg agctcctggc tcgcgaacct cggggggccg gccggcaccg
     1441 ggaacgcggt gacggtgagg ccggcgggac agccgtcgcg gtagaccagc gcggtggcgc
     1501 cctcgatcgc cagcgactcc aggcgcacct cggcgaaggc gcgggtcacc ggcagcagcc
     1561 gggagtcgtg ctcgagcatg tgctgcacgg cgggggtggc atacacctgg aggtggcggc
     1621 cctcgcggag gagaacgacg cccagggtgt ggtcgagctc ggcatcggtg agaacgacgc
     1681 cttcgaccgg ctggtgccgc atgccggtgg gctccgtgcc gggcaggcga gccagctggg
     1741 cgtggacgtc gggcgaagcg tcgagcagga accagcgccg tccgtcggca ctgacggcgg
     1801 ccgaggactg gctgcgtgga tgcgcacggg ccggctcccg ccgggcggtt cggcaggtgg
     1861 ggcaccagca gttccattgg ggaaagccgc cgccggcggc ggtcccgagc aagatgactt
     1921 gcaccctgaa aaagtaaggg gctcgctttc gcgagcccct caccgatggt cggtcgcctt
     1981 agagcgtcgc gacgtaggcg gtgacttcca tcgtgacggc cacgatctcg gcctcgggct
     2041 tggtccacgt catagcaccc tccggattga gtaggtgggc cctgtgggac ccggggaaca
     2101 gtgcagtggg tgaggaacac ccagccgggc ctgctcggcc cgacgctgcc ctcgtttatg
     2161 cagttcgtgt gccgcgcgtg agacaaacct gtgctgccgt cgtatgctat tggggtaact
     2221 ggagatgtgc agcggaccca gagcg
//
LOCUS       DASUYN010000289         5045 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_92554, whole genome shotgun sequence.
ACCESSION   DASUYN010000289 DASUYN010000000
VERSION     DASUYN010000289.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5045
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_92554"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..488
                     /locus_tag="VF061_05770"
     CDS             <1..488
                     /locus_tag="VF061_05770"
                     /inference="COORDINATES: protein motif:HMM:NF014755.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Ku protein"
                     /protein_id="HEX6669043.1"
                     /translation="RGEKAYALLIRTLEKKGLTAIATITIRKKEQLCALRPKDGALML
                     ETLYYPDEIRKRPEMDLDKVKITERELDMAFTLIDLLRKPFDPEEYADNYREALTQVI
                     DAKLEGREVVEAPPSRESKVIDLADALRKSVEAAKKSKPKRAARPRTRPAARRAARKV
                     S"
     gene            492..1580
                     /gene="ligD"
                     /locus_tag="VF061_05775"
     CDS             492..1580
                     /gene="ligD"
                     /locus_tag="VF061_05775"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF045432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-homologous end-joining DNA ligase"
                     /protein_id="HEX6669044.1"
                     /translation="MPVAIPAAGTVHAVVKQLDAARDRAVLHLDGHDLPVSNLDKALW
                     PAAGSRRAYTKRHLLRYLARVSRWMLPHLADRPLFVTRFPGGIDGKSFYQKHWEDPPP
                     FVRTVSIYSSHGETDGDYLICENLPTLLWLGQMASLELHAWYSRTAPEPDAMARGRRF
                     TGSEAALERSVLNYPDFIVFDLDPYDYSGREARGAEPELHRRAFNRTRKLALQVRQQL
                     DDLGLATYVKTSGRTGLHLYLPIVRELDFDAAREVAETIAKHALRERPREVTLEWSVE
                     RRRGKIFFDYNQNSRGKSLAVPYSTRRHPNATVSTPLRWEELERIYPTDFTLRTVPDR
                     LEAEGDPWEDILESKHDLGAILGVGGAA"
     gene            1577..2623
                     /gene="ligD"
                     /locus_tag="VF061_05780"
     CDS             1577..2623
                     /gene="ligD"
                     /locus_tag="VF061_05780"
                     /inference="COORDINATES: protein motif:HMM:TIGR02779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="non-homologous end-joining DNA ligase"
                     /protein_id="HEX6669045.1"
                     /translation="MSHSREALSRARGRLRYRAQPPWIPPMLATLSDRAPSGGGWVYE
                     PKLDGVRVLAYVLGGAVRLFSRNRRQVEGGYPELVEALSLAVRGDAVLDGEIVAPDPS
                     TGLSSFARLQQRMHLRDTVRVSRTGVAVELYLFDCLFYEGIDLRGMPLLDRKKVLRDV
                     VWYDGKVHFTPYRTTGSAAMYRDACAKGAEGIIAKRAESTYVSGRSTDWLKVKCVLQQ
                     EFVIGGYTAPQGAREHLGALLVGYYDEAGALRFAGKVGTGYDQETLEMLRRRLAPLHR
                     RTAPFAPGPVPAGEVQWVTPKLVAQIGFGEWTGAGLLRHPRYLGLREDKAAREVRREE
                     PKGGSAAAWRRGGT"
     gene            complement(2633..3232)
                     /locus_tag="VF061_05785"
     CDS             complement(2633..3232)
                     /locus_tag="VF061_05785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669046.1"
                     /translation="MISRRRLRLIWGLALTALPTAPAGAQAPALRAAAAPGRLELADA
                     YHLRLESAWPQGGAGAEACRNGGDEIVEGTLQRGVDGVYRGALARRTLLLFCGAHGGS
                     DAACELVLEGDGRVAMTGYVVPDEASPSGRALRLSWRPTLSHGAAVRGACSADFKRSV
                     EQMYRSARHGVEIAVPAAGAGVRRERLENYAWTVEVAAR"
     gene            complement(3410..>5045)
                     /locus_tag="VF061_05790"
     CDS             complement(3410..>5045)
                     /locus_tag="VF061_05790"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HEX6669047.1"
                     /translation="VFNVPSLLPEARPAPAVRADPGPADVPGRHEPDPGPAGAGDTRK
                     LAMLVDVSQALTGTLNLQAGLYGVLEVLQRHCGALRGAVTLLEEESGLLAVEAALGYP
                     RPAGRVRYRIGEGVTGMVAQSGSPAVVPRVSHEPRFLHRAAGRGQREEEVTFICVPIA
                     LDGGTVGTLGIEQPYVPGPVADRTVHALRIAAGMIAQALRIQRLVDQERRQLVEENTQ
                     LKQELKERYEFTHIIGNSGPMRRVYEQVSQVVGTSATVLIRGESGTGKELIAHALHQH
                     SPRAGQPFIRVNCAALPETLVESELFGYERGAFTGALARRKGRFELADGGTLFLDEIG
                     ELSPSTQAKLLRVIQEREFERLGGTATIQVDVRLIAATNKDLERAQAEGTFREDLYYR
                     LNVFAICVPPLRERKSDVLLLADHFVEKYARLHGRSIKRISTPAIDMLMTYHWPGNVR
                     ELENTIERAILVADGDVIHGHHLSPTLQTAEASGTVVSGSLGEAVAAFESNLIQDALK
                     TTRGNRARAARLLSTTERIINYKIRRYGIDPRRFRD"
BASE COUNT          728 a         1783 c         1837 g          697 t
ORIGIN      
        1 agcggggcga gaaggcctat gccctgctga tccgcacgct ggagaagaag ggcctcaccg
       61 ccatcgcgac catcacgatc cggaagaagg agcagctctg cgcgctccgg cccaaggacg
      121 gggcgctgat gctggagacg ctctactacc cggacgagat caggaagcgg ccggagatgg
      181 acctcgacaa ggtgaagatc accgagcgcg agctggacat ggccttcacc ctcatcgacc
      241 tgctgcgcaa gcccttcgat cccgaggagt acgcggacaa ctaccgcgag gcgctgaccc
      301 aggtgatcga cgcgaagctg gagggccgcg aggtggtgga ggcgccgccc tcgcgcgagt
      361 ccaaggtgat cgacctcgcg gacgcgctgc ggaagagcgt cgaggccgcg aagaagagca
      421 agccgaagcg cgcggcgcgg ccgcggaccc gtccggccgc ccggcgggcg gcgcggaagg
      481 tcagctagcc ggtgccggtc gcgattcccg ccgccggcac cgtgcacgcc gtcgtgaaac
      541 agctcgacgc cgcccgggac cgcgcggtgc tgcatctgga tggacacgat ctgccggtga
      601 gcaacctcga caaggcgctg tggcccgcgg cgggctcgcg ccgggcgtac accaagcgcc
      661 acctgttgcg gtacctcgcg cgagtgtcgc gctggatgct gccccacctg gccgaccggc
      721 cgctgttcgt gacccggttt cccgggggca tcgacgggaa gagcttctac cagaagcact
      781 gggaggaccc gccgccgttc gttcgcacgg tctccatcta ctccagccac ggcgagacgg
      841 acggcgacta cctgatctgc gagaacctgc ccacgctcct ctggctgggc cagatggcca
      901 gcctggagtt gcacgcctgg tacagccgca ccgcgcccga gcccgacgcc atggcgcgcg
      961 ggcggcggtt caccggctcc gaggccgccc tcgagcggtc ggtgctcaac tatcccgact
     1021 tcatcgtgtt cgacctcgac ccctacgact actcggggcg cgaggcgcga ggcgcggagc
     1081 cggagctcca ccggcgcgcg ttcaaccgca cccggaagct cgcgcttcag gtgcggcaac
     1141 agctggacga cctgggcctc gccacctacg tcaagacgtc gggacgcacc ggcctccacc
     1201 tctacctgcc gatcgtgcgg gagctcgact tcgacgccgc ccgcgaggtg gcggagacga
     1261 tcgcgaagca cgcgctccgg gagcgaccgc gggaggtgac cctcgagtgg tcggtggagc
     1321 gccgccgggg caagatcttc ttcgactaca accagaactc gcggggcaag tcgctggcgg
     1381 tgccctactc cacccggcgc catcccaatg cgaccgtctc caccccgctg cggtgggagg
     1441 agctggagcg gatctacccg accgacttca ccctgcgcac cgtgcccgac cgcctggagg
     1501 ccgagggcga cccctgggag gacattctcg agtcgaagca cgatctcggc gcgatcctgg
     1561 gcgtcggagg tgccgcgtga gccactcgcg cgaggcgctg tcgcgggcgc ggggccggct
     1621 ccgctatcgg gcccagccgc cctggatccc gcccatgctc gccacgctga gcgaccgcgc
     1681 cccctccggc ggcggctggg tctacgagcc caagctggac ggggtccggg tgctggcgta
     1741 cgtgctggga ggggcggtgc gactcttctc ccgcaaccgg cggcaggtgg aggggggcta
     1801 tcccgagctg gtcgaggcgc tctcgctcgc cgtgcggggc gacgcggtac tggacgggga
     1861 gatcgtcgcg ccggacccgt ccaccggcct ctcgtctttc gcgcggctgc agcagcggat
     1921 gcatctccgc gacacggtgc gggtgtcgcg gaccggcgtg gcggtggagc tgtacctgtt
     1981 cgactgcctg ttctacgagg ggatcgatct ccggggcatg cccctgctcg accgcaagaa
     2041 ggtgctgcgc gacgtggtgt ggtacgacgg caaggtgcac ttcacgccct accggactac
     2101 cggctcggcc gcgatgtacc gggacgcgtg cgccaagggc gcggaaggca tcatcgccaa
     2161 gcgcgcggaa tccacctacg tgagcggccg gtccaccgac tggctcaagg tgaagtgcgt
     2221 gctgcagcag gaattcgtga tcggcggcta caccgcgccg cagggcgccc gcgagcacct
     2281 cggcgcgctc ctggtcggct actacgacga ggcgggcgcg ctccgcttcg ccggcaaggt
     2341 gggcaccggc tacgaccagg agacgctgga gatgctccgc cgccggctcg cgcccctgca
     2401 ccgccgcacc gctccgttcg cgcccggccc ggtgccggcg ggcgaggtcc agtgggtcac
     2461 gccgaagctg gtggcgcaga tcggattcgg ggagtggacc ggggccggac tgctccggca
     2521 cccccgttac ctcggcctcc gggaggacaa ggccgcgcgg gaggtgcgcc gggaggagcc
     2581 gaaggggggg agcgccgcgg cgtggcgccg gggagggacg tgagaacgcc cgctaccgcg
     2641 ctgccacctc caccgtccag gcatagttct ccagccgctc tctccgcact ccagctcccg
     2701 ccgccggtac cgctatctcg accccgtgcc gggcagaccg gtacatctgc tcgaccgagc
     2761 gcttgaagtc ggccgagcag gcgccgcgca cggccgcgcc atgggaaagc gtgggccgcc
     2821 aggagagccg caacgcgcgg ccgctggggc tggcctcgtc ggggaccacg tagccggtca
     2881 tcgcgaccct gccgtcgccc tccagcacga gctcgcaggc cgcgtcgctc ccgccgtgcg
     2941 cgccgcagaa gagaagcagg gtccggcggg cgagggcgcc ccggtacacc ccgtccacgc
     3001 cgcgctgcag cgttccctcg acgatctcgt cccccccgtt gcggcaggcc tcggcgcccg
     3061 ccccgccctg cggccaggcg ctctccaggc gaaggtggta cgcgtcggcg agctcgagcc
     3121 tgccgggcgc ggcggcggcg cgcagcgcgg gcgcctgcgc ccccgcggga gcggtgggaa
     3181 gggccgtgag cgccagtccc cagatgagcc gaagccttcg tcgcgagatc atggtcattt
     3241 cccccgagtg agtgaccgat agctgccgtg gttcccccaa gaacaagagc cgtgcctcga
     3301 tccgggcacg gctccctggg gtaccgcagt gcgttgtgcg gtctgggctt gggctggggc
     3361 gaccggcagt tcgccgcggc cgcgaaggcg cggccggacg acaaattcgt cagtcgcgga
     3421 agcggcgggg gtcgatgccg tagcggcgaa tcttgtagtt gatgatccgc tcggtggtac
     3481 tgagcagccg cgcggcgcgg gcccgattgc cgcgggtcgt cttgagcgcg tcctggatca
     3541 ggttgctctc gaaggcggcg accgcctcac ccagtgagcc cgacacgacc gtgccggacg
     3601 cctccgccgt ctggagcgtg ggcgagaggt gatgaccgtg aatcacatcc ccgtcggcga
     3661 cgaggatggc gcgctcgatg gtgttctcca gctcgcgaac gttgccgggc cagtgatagg
     3721 tcatcagcat gtcgatcgcc ggcgtcgaga tccgcttgat gctccggccg tggagccggg
     3781 cgtacttctc cacgaagtga tcggccagca gcagcacgtc cgacttccgc tcccggagcg
     3841 gcggcacgca gatggcgaag acgttgagcc ggtagtagag gtcctcgcgg aaggtcccct
     3901 ccgcctgggc ccgctccagg tccttgttgg tggccgcgat gagccgcacg tccacctgaa
     3961 tcgtcgcggt accacccagc cgctcgaact cgcgctcctg gatcacccgg agcagcttgg
     4021 cctgggtcga ggggctcagc tcgccgatct cgtccaggaa gagggtgccg ccgtccgcca
     4081 gctcgaagcg gcccttgcgc cgcgccaggg ccccggtgaa ggccccgcgc tcgtagccga
     4141 acagctcgga ttcgaccagc gtctcgggga gggcggcgca gttcacccgg atgaagggct
     4201 gccccgcccg gggcgagtgc tgatgcagcg cgtgggcgat gagctccttg ccggtgcccg
     4261 actcgccccg gatcaggacg gtggcggagg tccccaccac ctggctcacc tgctcgtaga
     4321 cccggcgcat ggggccgctg ttgccgatga tgtgggtgaa ctcgtagcgc tccttgagct
     4381 cctgcttgag ctgggtgttc tcctcgacca gctgccgccg ctcctggtcc accaggcgct
     4441 gaatccgaag cgcctgggcg atcatgcccg cggcgatgcg cagggcgtgc acggtgcggt
     4501 cggccacggg cccgggcacg tagggctgct cgatgcccag ggtgccgacg gtgccgccgt
     4561 cgagggcgat ggggacgcag atgaaggtca cctcctcctc ccgctggccc cgtccggccg
     4621 cgcggtgcag gaagcgcggc tcgtggctca cgcggggcac caccgccggg gagccggact
     4681 gggcgaccat cccggtcacg ccctcgccga tccggtaccg cacccggccg gcggggcggg
     4741 ggtagccgag cgcggcctcg acggcgagca acccgctctc ctcctccagg agcgtgacgg
     4801 ccccccgaag ggcgccgcag tggcgctgga gcacctcgag cacgccgtag aggccggcct
     4861 ggaggttcag ggtgccggtg agcgcctggc tcacgtccac cagcatcgcg agcttgcggg
     4921 tgtcgccggc gccagccgga cccgggtccg gctcgtggcg gcccgggacg tcggccgggc
     4981 ccgggtcggc tcgcacggcg ggcgcgggac gggcctcggg caggagggat ggaacgttga
     5041 agacg
//
LOCUS       DASUYN010000290         2939 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_754543, whole genome shotgun sequence.
ACCESSION   DASUYN010000290 DASUYN010000000
VERSION     DASUYN010000290.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2939)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2939)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2939
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_754543"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..850
                     /locus_tag="VF061_05795"
     CDS             <1..850
                     /locus_tag="VF061_05795"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HEX6669048.1"
                     /translation="DVSVASLVGPGAELVVPLDAGAERMAVLVLGSRISDKLYGRAEL
                     ELAGTLSFAAAIALKNSELVVPLDAGSERMAVLVLGSRISDKLYGRPELELAGTLSFA
                     AAIALKNSELVEQLHSAATTDELTGLYNRRALEERLAAEISRSLRHQLHTSVLLLDLD
                     RFKVVNDTMGHAAGDRLLIQVAGILRQQCRALDVVGRLGGDEFLVILPMTKPAEAQVF
                     VARVQNSLREMEKAHPDLGPCTLSMGIAESPRHGTTVGSVLAAADTALYKAKRAGRNA
                     VEVADA"
     gene            854..1399
                     /locus_tag="VF061_05800"
     CDS             854..1399
                     /locus_tag="VF061_05800"
                     /inference="COORDINATES: protein motif:HMM:NF018984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CGNR zinc finger domain-containing protein"
                     /protein_id="HEX6669049.1"
                     /translation="MDHPEFTLLGDALWLDFINSALGRTPNPPDLLPDAAAFARWALA
                     QRLLQLDRGPPYDAVRELRTCLTGLAAALHGEVQPPGGAIAAINELLAGCTGSHRLVR
                     VSGEWRLQFAPGRPFSPLEAIARSAAATLADRSVVVRRCAGETCSLFFTDSSPTRSRR
                     WCSQAPCGTPLRVERRRGLLR"
     gene            1351..>2939
                     /locus_tag="VF061_05805"
     CDS             1351..>2939
                     /locus_tag="VF061_05805"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX6669050.1"
                     /translation="MRHSPAGRAPPGPAPLTAPTAPEPRVAFQRTREALGARYHLERI
                     VAASAERVLFQAHDEVLKRRVSVRVNFYLDDAVRAWFMRESEALGQLDDPGILHVYDA
                     GVSGDLAYRIGNWVDGEGLREAVRRGPRPIPAVLALARDLLGALEHAHLRGIIVRSVS
                     PLSILVSAGGRATVTDLRHCSYCLPAMPAGASPPALAFMAPEVRHGATGDPASDIYAV
                     GALLYFAVTGQEPTLDPAGIRRPTELRPTCPRVIERIVLRALRAQPESRYFTAAEMLE
                     DFASDAGTYDTPPPTLGAAVSADEDRARWEQRLRRALGDDYELLDLLGTGGFGRVYRV
                     RDLQLERLVALKVLHPALIRDPGVIERFRREAQLAARLDHPNIVNIYEIGGRSGLIWY
                     TMELIDGPSVAQLVEREGPLPLDRILRILREGLSALAHAHAFGLVHRDIKPENLLIAS
                     DGSLQITDFGLALALRQKFGGATSQSGTPQFASPEQLLGERVDQRSDLYSLAAVAYYA
                     LLGRPPFSGITPEQVLARQAT"
BASE COUNT          381 a         1095 c         1031 g          432 t
ORIGIN      
        1 cgacgtgtcc gtcgcctcgc tggtggggcc cggcgccgag ctggtggtgc cgctcgacgc
       61 gggcgccgag cggatggcgg tcctggtgct cggctcccgc atcagcgaca agctgtacgg
      121 gcgggccgag ctggagctgg cggggacact ctccttcgcc gcggcgatcg cactcaagaa
      181 ttcggagctg gtggttcccc tcgatgccgg gtcggaacga atggccgtcc tggtgctcgg
      241 ctcccgcatc agcgacaagc tctacggccg gccggagctg gagctggcgg gcacgctctc
      301 cttcgccgcc gccatcgcgc tcaagaactc cgagctggtg gagcagctcc acagcgcggc
      361 caccaccgac gagctcaccg ggctctacaa ccgccgggcg ctggaggagc ggctggcggc
      421 cgagatctcc cgcagtctcc ggcaccagct ccacaccagc gtgctgctgc tggacctcga
      481 ccgcttcaag gtggtgaacg acaccatggg acacgccgcg ggcgaccggc tgctgattca
      541 ggtggccggc atcctccgcc agcagtgccg cgcgctggac gtggtgggcc gcctcggcgg
      601 cgacgagttc ctggtgatcc tgccgatgac caagccggcc gaggcccagg tgttcgtcgc
      661 ccgggtgcag aacagcctgc gggagatgga gaaggcccac ccggatctgg gcccctgcac
      721 gctgagcatg gggatcgccg agtcaccccg gcacggcacc accgtgggca gcgtgctcgc
      781 cgcggccgac accgcgctct acaaggcgaa gcgcgccggc cgcaacgcgg tcgaggtcgc
      841 ggacgcctag acgatggatc accccgagtt cacgctgctc ggcgacgccc tctggctgga
      901 cttcatcaac tccgcgctgg gccgtacccc caatcctccc gatctcctcc ccgatgccgc
      961 cgccttcgcc cgctgggcgc tggcgcagcg gctgctccag ctcgaccgcg gtccgcccta
     1021 cgacgcggtg cgcgagcttc gcacctgcct gaccggtctg gcggcggcgc tgcacggcga
     1081 ggtccagccg ccgggcggcg ccatcgcggc gatcaacgag ctgctggccg ggtgcaccgg
     1141 gagtcaccgg ttggtgcggg tctcggggga atggcggctt cagttcgcgc cgggtcgccc
     1201 cttctccccg ctggaggcga tcgcgcgctc ggccgccgcg accctcgccg accgatcggt
     1261 cgtggtgcgc cgctgcgccg gcgaaacctg ctcgctcttc ttcaccgatt cctcgccgac
     1321 ccggagccgc cgctggtgca gccaggcgcc gtgcggcact cccctgcggg tcgagcgccg
     1381 ccggggcctg ctccgctgac cgcgcccacc gctccggagc ctcgggtcgc gttccagcgc
     1441 acgcgagagg cgctgggcgc ccgttaccac ctggagcgca tcgtcgccgc ttccgccgag
     1501 cgggtgctgt tccaggccca cgacgaggtg ctgaagcggc gcgtcagcgt gcgggtgaac
     1561 ttctacctcg acgacgccgt ccgtgcgtgg ttcatgcgcg agtcggaggc cctgggccag
     1621 ctcgacgatc ccgggatcct gcacgtctac gatgccggcg tgtccgggga cctcgcgtac
     1681 cggatcggga actgggtgga cggcgagggg ctgcgcgagg cggtgcgccg ggggccccgg
     1741 ccgatccccg cggtgctggc gctggcgcgc gacctcctcg gcgcgctgga gcacgcccac
     1801 ctccggggga tcatcgtccg cagcgtgtca ccgctctcga tcctggtcag cgccggcggg
     1861 cgggcgacgg tcaccgacct gcgccactgc agctactgcc tgccggccat gcccgccggc
     1921 gcctcccctc cggcgctggc attcatggcg cccgaagtgc ggcacggcgc cacgggcgat
     1981 ccggcgtccg acatctacgc cgtcggcgcg ctgctctact tcgccgtcac cggccaggag
     2041 cctacgctgg atccggccgg aatccgccgg cccaccgagc tccgtcccac ctgcccgcgg
     2101 gtgatcgagc ggatcgtgct ccgggcgctg cgggcccagc cggagtcgcg ctatttcacg
     2161 gcggcggaga tgctggagga cttcgcctcc gacgccggca cctacgacac cccgccaccg
     2221 acgctcggtg ccgcggtgtc ggcggacgag gaccgggcgc gctgggagca gcggctccgg
     2281 cgggcgctgg gagacgatta cgagctgctc gacctcctcg gcaccggcgg attcgggcgg
     2341 gtgtaccggg tccgggatct ccagctcgag cgcctggtcg cgctcaaggt cctgcacccc
     2401 gcgctgatcc gcgatcccgg cgtgatcgag cgcttccggc gtgaggcgca gctggccgcc
     2461 cggctcgacc acccgaacat cgtcaacatc tacgagatcg gcgggcggtc ggggctcatc
     2521 tggtacacca tggagctgat cgacggcccg agcgtggcgc aactggtgga gcgcgagggg
     2581 ccgctgcccc tcgacaggat ccttcggatc ctgcgggaag gactctccgc cctggcgcac
     2641 gcccacgcat tcggcctggt gcaccgggac atcaagccgg agaacctgct gatcgcttcg
     2701 gatgggagcc tccagatcac cgacttcggc ctcgcgctgg cccttcggca aaagttcggt
     2761 ggggctacca gccagagcgg caccccccag ttcgccagcc cggagcagct tctcggggaa
     2821 cgggtggacc agcggtcgga cctctacagc ctggcggcgg tcgcctacta cgccttgctg
     2881 ggccgtcctc ccttctccgg catcacgccc gagcaggttc tcgcccggca ggccacgaa
//
LOCUS       DASUYN010000291         2932 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1416865, whole genome shotgun sequence.
ACCESSION   DASUYN010000291 DASUYN010000000
VERSION     DASUYN010000291.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2932)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2932)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2932
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1416865"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..777
                     /locus_tag="VF061_05810"
     CDS             <1..777
                     /locus_tag="VF061_05810"
                     /inference="COORDINATES: protein motif:HMM:NF025053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase 2C domain-containing
                     protein"
                     /protein_id="HEX6669051.1"
                     /translation="TDVGRRRKLNEDNLLIDRDVHLYAVCDGMGGHNAGEIASKMAIE
                     TLHAFIAKSHGEEKDITWPYGLEKELSFEANRLKTAVRLANKRVFKAADNREDYTGMG
                     TTVVAALVSDSVLTVGSAGDSRCYLLRGDELTQISRDQTMAQELIDMGVMRPADTAGT
                     PLEHTLSSSIGGRQTEPVVTRFDLTWDTVVLLCSDGLTRHVPDERIRERLRTAGSARE
                     ACEGLLEDALRGGGSDNITVVVRRALPRDDGGGERPGPRA"
     gene            1062..1814
                     /locus_tag="VF061_05815"
     CDS             1062..1814
                     /locus_tag="VF061_05815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669052.1"
                     /translation="MRSVPRWAPPTVAVLAFTLVGCGEEATSPGLQPAATTARAVAET
                     GNGAPSGAHYTLNIIGVPKDKSADFDGGNGHRIFVDLGRTGAVANTRINLGPGDFAVL
                     DANGTDGTASFQLPNPDPDGDGTTAYVVYARALGKPGGKATMQSCYEDDLGSWCAVDF
                     DGGVEPITLQRTKGGVGKFTNVSKDLLYVDYCTAWDVGDDLLPGTEDDVCTDVEQIAL
                     FSNTLLSYFWSYGNEGLKLAQLRFYEVAAGTP"
     gene            complement(1874..2755)
                     /locus_tag="VF061_05820"
     CDS             complement(1874..2755)
                     /locus_tag="VF061_05820"
                     /inference="COORDINATES: protein motif:HMM:NF021507.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphodiester glycosidase family protein"
                     /protein_id="HEX6669053.1"
                     /translation="MRPRTRALAVAAVAAALAGAVGAGTAARPVSGSRAWPLDDLPAR
                     LDRLVAWQPGASGVEWGELQVGGAGEAWRTRVAVARVDPKRVALALEPAFADGRRWVV
                     AETGPPAALAVNAGQFRGSLPWGWVVAGGRQLLSPRSAPLAGAVVVDRDGAVRIVPPG
                     EVAAEQRRGTAREAFQSYPMLLVDGATPEPLLRRGLGVAVAHRDARLALGTAPDGRVI
                     IALTRFDALGPALGRLPFGLTSAEMAAVMRALGCRDAILLDGGISGQLMVRDAAGHPH
                     TWPGIRSVPLGLIGRTR"
BASE COUNT          440 a         1060 c         1057 g          375 t
ORIGIN      
        1 accgacgtcg gacggcgccg caagctcaac gaggacaacc tcctgatcga ccgcgacgtg
       61 cacctgtacg cggtctgcga cggcatgggc ggccacaacg cgggcgagat cgcctccaag
      121 atggcgatcg agaccctgca cgccttcatc gccaagagcc acggcgagga gaaggacatc
      181 acctggccct acggcctgga gaaggagctc tccttcgagg ccaaccggct caagaccgcg
      241 gtgcgcctgg ccaacaagcg cgtgttcaag gccgcggaca accgcgagga ctacaccggc
      301 atgggcacga cggtggtggc ggccctggtc tcggacagcg tgctgaccgt cggctcggcg
      361 ggcgacagcc ggtgctacct cctgcgcggc gacgagctga cccagatcag ccgggatcag
      421 accatggcgc aggagctgat cgacatgggc gtcatgcgtc cggccgatac cgcgggcacc
      481 ccgctggagc acaccctttc cagctcgatc ggcggaaggc agaccgagcc ggtcgtcacc
      541 cgcttcgatc tcacctggga taccgtggtc ctgctctgca gcgacgggct cacccggcac
      601 gtgccggacg agcggatccg cgagcggctc cgcacggcgg ggtcagcccg ggaggcctgc
      661 gaagggctgc tggaggacgc gctccggggc gggggcagcg acaacatcac cgtggtggtg
      721 cggcgggccc tgccccgcga cgacggcggc ggcgagcggc caggccctcg ggcatgaacg
      781 gctgccggag gcaaggcgct cctcctccgg cagccccagg aagtcccttg cactcgcccc
      841 ggtcgatctg caattcgcgc cgcgccggtt tgcaccggtc tggtgttctg cagtgcagag
      901 cttgccgcgt agccgatccg ctgtccactt cttcggcacc gcccaacttt tcagaattgc
      961 ggctcccgct ccgatctccg atcctgagca ggcccaagtg cggcgaggga ggcgagggag
     1021 ggttgggctc tcaccggcag tgctcggata caggaggcgg catgcgcagc gtgcctcgat
     1081 gggctccccc cacggtcgcg gttctagcgt tcaccctcgt cggctgcggc gaggaggcta
     1141 ccagtcccgg tctccagcct gcggcgacga ctgcacgggc cgtggccgag acgggcaacg
     1201 gcgcccccag cggcgcgcac tacaccctca acatcatcgg cgtgccgaag gacaagtcgg
     1261 cggacttcga cggcggcaac ggccaccgga tcttcgtgga tctgggcagg accggggcgg
     1321 tggccaacac gcgcatcaac ctgggacccg gtgacttcgc cgtgctggac gccaacggca
     1381 ccgacgggac ggcgtccttc cagctgccga acccggatcc cgacggcgac gggacgaccg
     1441 cctatgtggt ctacgcccgt gcgctgggca agcccggcgg caaggcgacg atgcagtcgt
     1501 gctacgagga cgacctgggc tcctggtgcg ccgtggattt cgacggcggg gtcgagccga
     1561 tcacgctcca gcgcaccaag ggcggcgtcg ggaagttcac caacgtctcg aaggacctgc
     1621 tctacgtgga ctactgtacc gcgtgggacg tgggtgacga cctcctgccc gggaccgagg
     1681 acgacgtgtg caccgacgtg gagcagatcg cgctcttcag caacacgctg ctctcgtact
     1741 tctggtccta cggcaacgag ggactcaagc tggcgcagct gcggttctac gaggtggcgg
     1801 ccgggacgcc ctgaacgccc cgggaaggtc ggcgtcgcgc ggataggagc gggctcggtg
     1861 cacgagcccg ctcttaccgt gtccggccga tgaggccgag cggcacgctc cggatccccg
     1921 gccaggtgtg cgggtgcccg gcggcatcgc gcaccatgag ctggccggag atgccgccgt
     1981 cgagcaggat ggcgtcgcgg cagccgaggg cgcgcatgac ggcggccatc tccgccgagg
     2041 tgaggccgaa ggggagccgc ccgagcgcgg ggccgagcgc gtcgaaccgg gtgagcgcga
     2101 tgatgacgcg gccgtcgggg gcagtgccga gcgccaggcg ggcgtcgcgg tgcgcgacgg
     2161 ccacgcccag cccgcggcgc aggagcggct ccggggttgc cccatccacc agcagcatcg
     2221 gatagctctg gaacgcttcc cgggccgtgc cccgtcgctg ctcggcggcg acctcaccgg
     2281 gcgggacgat gcggaccgcg ccgtcccggt ccaccacgac cgcgccggcg agcggcgcgg
     2341 agcggggcga caggagctga cgtccgccgg ccacgaccca cccccacggc agcgagccgc
     2401 ggaactgccc cgcgttcacc gcgagcgccg cgggcggacc ggtctccgct accacccagc
     2461 ggcgcccgtc ggcgaacgcg ggctccaacg ccagcgccac gcgcttcggg tccacccggg
     2521 cgacggcgac ccgggtgcgc cacgcctctc cggcgccgcc gacctggagc tcaccccact
     2581 cgacgccgct cgcgcccggc tgccaggcga ccagacggtc gagccgcgcg ggcaggtcgt
     2641 cgagcggcca ggcccgggag cccgacaccg ggcgcgcagc cgtgccggcc ccgaccgcac
     2701 ccgcgagcgc ggcggccacg gccgcgaccg cgagcgcgcg ggttcgcggg cgcatggggc
     2761 tcactggcag ccggccatct ggagccgctg gagcgagtcg gcgagcgcca tcagctcggc
     2821 ggtgttgccg gcctccgagg cggcgttcag cttctcgctc agccgctcga tctccttctc
     2881 gtgcttctcg gagttcttcg ccatgcagtc gcccatcgcc gcctgcgccg gg
//
LOCUS       DASUYN010000292         2367 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_94750, whole genome shotgun sequence.
ACCESSION   DASUYN010000292 DASUYN010000000
VERSION     DASUYN010000292.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2367)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2367)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2367
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94750"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            97..435
                     /locus_tag="VF061_05825"
     CDS             97..435
                     /locus_tag="VF061_05825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HEX6669054.1"
                     /translation="MADCLFCRIVAGEIPATIVKRTEDAVAFRDIDPRAPTHVLVIPT
                     RHVTAVRDAADDGLLGGLLRFAAGVASELGLDAGGYRIVTNTGKDAGQSVDHLHFHVL
                     GGRKMTWPPG"
     gene            527..724
                     /gene="rpsU"
                     /locus_tag="VF061_05830"
     CDS             527..724
                     /gene="rpsU"
                     /locus_tag="VF061_05830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002614080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HEX6669055.1"
                     /translation="MPEVIIHDDESFERALKRFKKKCEKAGILSDLRKHRHFEKPSEK
                     RKRKMNAAVRKNRRGPRVPRG"
     gene            708..1157
                     /locus_tag="VF061_05835"
     CDS             708..1157
                     /locus_tag="VF061_05835"
                     /inference="COORDINATES: protein motif:HMM:NF020977.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HEX6669056.1"
                     /translation="MSPAASVADALRAAMNAARKAQDKDRTLVLGTILANLKNREIDL
                     RRPATDEEVVEVLRKGIKIRREAIEQYQSASRTDLADVEQAQIAVLEEFLPPAVDPEE
                     IRAAVREVIAGGAKDLGKVMGQIVPRYKGRADGKLINQIVREELQAG"
     gene            1163..>2367
                     /locus_tag="VF061_05840"
     CDS             1163..>2367
                     /locus_tag="VF061_05840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669057.1"
                     /translation="MVESLSSNGVPTMTEAGTPSPLPGERTADGLEAIELESVLEVVA
                     GHAAGLLGAARVRGRRPTLDLDWVCQELARVGEVAALFRRGDGLLAEPVPDVSRALSR
                     LRIEGSVLEGGDLIAIQRLLGAARRVHDDLRRAKEAAPLAAELSHQLPDKSCERRLEQ
                     SLDADGTLLDTASPGLAAARREVQHARQRLLRRLDALLRGLDSTAAPADASVTVRGGR
                     YVIPVRRDSRSRPPGIVHDESGSAGTLFVEPTEAIELGNALREAEVEEERETLRVLRE
                     LTGLLRPELPALRGVLEMCVAVDDLVARARYAVAVEGEVPEVVAAPGGLRIVHGRHPL
                     LLGGADPVVPFDLELDPSERTLLISGPNTGGKTVLLKAVGLASALAQSGIVPPVGAGS
                     RLPAFGGFFA"
BASE COUNT          340 a          807 c          891 g          329 t
ORIGIN      
        1 tcgaggcgat ccggctcgcc gcgcacacgt tgcggttcga gaccgcggcg gtggccgccg
       61 cagcggctgc cgtcgccgga cgactacgga ggagccatgg ctgactgcct gttctgccgc
      121 atcgtcgcgg gcgagatccc cgcgactatc gtcaagcgca ccgaggacgc ggtggccttc
      181 cgggacatcg atccccgggc gccgactcac gtgctggtga tcccgacccg gcacgtgacg
      241 gcggtgcgcg acgcggccga cgacgggctg ctggggggct tgctccggtt cgcggccgga
      301 gtggcgagcg agctgggact ggatgccggg gggtaccgca tcgtcaccaa caccggcaag
      361 gatgccggcc agagtgtgga tcatctgcac ttccacgtgc tcggcgggcg gaagatgacc
      421 tggccgccag ggtgagacgc cgtccttgcc tccccgcttg acgccgccta aattccggtg
      481 cttctaccat ttacgcccac aagggccgag aggggtgata cactgaatgc cggaagtcat
      541 catccatgat gacgagagct tcgagcgggc gctcaagcgc ttcaagaaga agtgcgagaa
      601 ggccgggatc ctgtcggatc tccgcaagca ccgtcacttc gaaaagccta gcgagaagcg
      661 gaagcggaag atgaacgccg ccgtccgcaa gaaccgccgg ggcccgcgtg tcccccgcgg
      721 ctagcgtggc cgatgccctg cgggcggcga tgaacgccgc ccgcaaggcg caggacaagg
      781 accgcaccct cgtactcggc accatcctcg ccaacctcaa gaatcgcgag atcgatctcc
      841 gcaggccggc gacggacgag gaagtggtgg aggttctccg gaaggggatc aagatccgcc
      901 gcgaggcgat cgagcagtac cagtcggcga gccggaccga tctggcggac gtggagcagg
      961 cacagatcgc ggtgctggag gagttcctgc cgcccgcggt ggaccccgag gagatccggg
     1021 ccgcggtgcg cgaggtgatc gccggcgggg cgaaggacct cggcaaggtg atgggccaga
     1081 tcgtcccccg ctacaagggc cgggccgacg gcaagctgat caatcagatc gttcgcgagg
     1141 agcttcaggc ggggtgatgg acgtggtgga gtctctctct tccaacgggg tgccgaccat
     1201 gaccgaggcc ggcaccccgt cgcctttacc gggggagcgg accgcggacg ggttggaggc
     1261 gatcgagctg gagtcggtgc tcgaggtggt cgcgggccac gccgccggct tgctcggcgc
     1321 ggcgcgcgtg cgggggcgcc ggcccacgct cgatctcgac tgggtgtgcc aggagctggc
     1381 gagggtcggt gaggtggcgg cgctctttcg ccggggcgac gggctcctcg ccgagccggt
     1441 gcccgacgtg tcgcgggcgc tctcccggct ccggatcgag ggcagcgtgc tcgagggcgg
     1501 agacctgatc gcgatccagc gcctgctcgg cgccgcccgg cgggtgcacg acgatctccg
     1561 acgggcgaag gaggcggcgc cgctggcggc cgagctgtct caccagctcc ccgacaagtc
     1621 ctgcgagcgc cgcctggagc agtcgctcga cgcggacggc acgctcctcg acaccgcgag
     1681 tcccgggctc gccgcggcgc ggcgcgaggt gcagcacgcg cgccagcgtc tgctccggcg
     1741 gctcgacgcg ctgctccggg gactcgactc gaccgccgca cccgccgatg cctcggtgac
     1801 ggtccggggc gggcggtacg tgatcccggt gcggcgcgac tcgcggagcc gtcctcccgg
     1861 catcgtgcat gacgagtccg gcagcgcggg caccctcttc gtcgagccga ccgaggcgat
     1921 cgagctgggc aacgccctcc gggaggcgga ggtcgaggag gagcgggaga cgctccgggt
     1981 gctgcgcgag ctcaccggcc tgctgcgccc cgagctgccc gccctgcgcg gcgtgttgga
     2041 gatgtgcgtc gccgtggacg acctggtcgc ccgggcgcgg tatgccgtcg cggtcgaggg
     2101 cgaagtgccc gaggtcgtgg ccgcgcccgg cgggctccgg atcgtgcacg gccggcaccc
     2161 gctgctcctc ggcggcgcgg accccgtggt ccccttcgat ctcgagctgg acccctccga
     2221 gcggacgctc ctcatcagcg gccccaacac cggcggcaag accgtcctgc tcaaggcggt
     2281 gggtctcgcc tccgcgctgg cgcagagtgg catcgtgccg ccggtcggcg cgggctcgag
     2341 gctgcccgcg ttcggcggct tcttcgc
//
LOCUS       DASUYN010000293         2597 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_536692, whole genome shotgun sequence.
ACCESSION   DASUYN010000293 DASUYN010000000
VERSION     DASUYN010000293.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2597)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2597)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2597
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_536692"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..869)
                     /locus_tag="VF061_05845"
     CDS             complement(<1..869)
                     /locus_tag="VF061_05845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homogentisate 1,2-dioxygenase"
                     /protein_id="HEX6669058.1"
                     /translation="MPIYHTMGAIPRKRHIAFRKPDGGIYAEELMGHEGFTGTASLLY
                     HVHPPTTVKSARRLRETKYEADPDQTLRHRHFRTAQVKQGGSPTLDRVPLLFNNEVAM
                     LYVEPDENDAHFYRNAQADELVYVSKGGGTLETVFGDLPFHEGDYLVIHRGILHRWRL
                     DLGAEQTKLLVMESRGHVRWPKRYRNEFGQLIEGAPYSERDIRRPTTLRTHDEKGDFP
                     ILVKQYEGLNEIILDHHPFDVVGWDGYFYPWAFNIHDFEPIVGRVHQPPPVHQTFQGD
                     GFVVCSFCPRPYD"
     gene            complement(988..2112)
                     /gene="hppD"
                     /locus_tag="VF061_05850"
     CDS             complement(988..2112)
                     /gene="hppD"
                     /locus_tag="VF061_05850"
                     /EC_number="1.13.11.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003868 - 4-hydroxyphenylpyruvate
                     dioxygenase activity [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006572 - tyrosine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylpyruvate dioxygenase"
                     /protein_id="HEX6669059.1"
                     /translation="MQTDTMPAAGEATDTFPINGTDFVEFYVGNAKQAAQYYRSAFGF
                     QLKAYRGPETGVRDRASYLLEQNKVRLVLTSALGPAHPIADHVLRHGDGVRDIALWVD
                     DAREAFARAVERGAQPAAAPEVLRDEDGEVVLAAIHTYGDTIHSLVERRNYEGAFLPG
                     FRRMESRYNPAPVGLLHVDHCVGNVELGRMNTWVKFYEDVMGFRNLISFDDKDISTEY
                     SSLMSKVVASGNERIKFPINEPAQGKKKSQIDEYLEFYRGPGVQHLAIATDDIIETVT
                     GLRDRGVEFLRVPTTYYADLQSRVGRIDEPVDTLADLGILVDRDPDGYLLQIFTKPVQ
                     DRPTVFYEIIQRKGARSFGKGNFKALFEAIEREQALRGNL"
     gene            complement(2187..>2597)
                     /locus_tag="VF061_05855"
     CDS             complement(2187..>2597)
                     /locus_tag="VF061_05855"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX6669060.1"
                     /translation="QPATVAKPASLRASGETVLVLEDEDAVRELTARVLRDRGYEVVL
                     ARNGAEALVRLRNRGNQPDLLLTDVVVPDMGTEELEGEVHRLHPDLPILYMSGYPRDD
                     ILARGLLRGEQPFLQKPFTSEDLAHEVGRMVRRA"
BASE COUNT          394 a          862 c          873 g          468 t
ORIGIN      
        1 aagtcgtagg gccggggaca gaagctgcag accacgaacc cgtcgccctg gaaggtctgg
       61 tgcaccggcg gcggctggtg aacccggccg acgatgggct cgaagtcgtg gatgttgaag
      121 gcccagggat agaagtagcc gtcccacccc accacgtcga agggatggtg gtcgaggatg
      181 atctcgttga gcccttcata ctgcttgacc agaatcggga agtcgccctt ctcgtcgtgg
      241 gtccgcagcg tggtgggccg gcggatgtcg cgctcgctgt agggagcccc ctcgatcagc
      301 tgcccgaact cgttgcggta gcgcttgggc cagcgcacgt ggccgcgact ctccatgacg
      361 aggagcttgg tctgctcggc gccgaggtcg agccgccagc ggtgcaggat gccgcggtgg
      421 atgacgaggt agtcgccctc gtggaacggc aggtcgccga acacggtctc cagcgtgccg
      481 ccgcccttgc tcacgtagac cagctcgtcg gcctgggcgt tgcggtagaa gtgggcgtcg
      541 ttctcgtccg gctcgacgta cagcatcgcc acttcgttgt tgaagagcag cggcacgcgg
      601 tccagcgtcg ggctcccgcc ctgcttcacc tgcgcggtgc ggaaatgacg gtgccggagc
      661 gtctgatcgg gatcggcctc gtacttcgtc tcccgcagcc gccgcgccga cttcaccgtg
      721 gtggggggat gaacgtggta gagcagcgag gccgtcccgg tgaacccctc gtgccccatc
      781 agctcttcgg cgtagatccc gccatccggc ttccggaacg cgatgtggcg tttccggggg
      841 atcgcgccca tggtgtggta gatcggcatc tccgcctccc gaattcggtg ggagaacgcg
      901 tgtcatcctg agcggagcga tggagacatg acctggttca tgcccccctc acttcgctca
      961 gggtgacact ctcccctcac ctctgaccta aagattcccg cgcagcgcct gctcccgctc
     1021 gatggcctcg aacagcgcct tgaagttccc cttgccgaag ctgcgggcgc ccttgcgctg
     1081 gatgatctcg tagaacaccg tcgggcggtc ctgcaccggc ttggtgaaga tctggagcag
     1141 gtagccgtcg ggatcgcggt ccaccagaat gccgaggtcg gccagggtgt ccaccggctc
     1201 gtcgatccgg cccacccggg actgcagatc ggcatagtag gtcgtcggca cccggaggaa
     1261 ctccaccccg cggtcccgca gcccggtcac ggtctcgatg atgtcgtcgg tcgcgatcgc
     1321 caggtgctgg acgcccggcc cgcggtagaa ctccaggtac tcgtcgatct gcgacttctt
     1381 cttgccctgg gccggctcgt tgatggggaa tttgatccgc tcgttcccgc tggcgaccac
     1441 cttggacatc agcgagctgt attcggtcga gatgtccttg tcgtcgaacg agatgaggtt
     1501 gcggaacccc atcacgtcct cgtagaactt gacccaggtg ttcatccggc ccagctccac
     1561 gttgccgacg cagtggtcca cgtgcagcag cccgacgggc gccggattgt accgactctc
     1621 cattcggcgg aagccgggca ggaaggcgcc ctcgtagttc cgccgctcga ccaggctgtg
     1681 gatggtgtcg ccgtaggtgt ggatcgcggc gagcaccacc tcaccgtcct cgtcgcgcag
     1741 cacctcgggc gccgccgccg gctgcgcgcc ccgctcgacc gcgcgcgcga acgcctcccg
     1801 cgcgtcgtcc acccagagcg cgatgtcgcg gacgccgtcg ccgtggcgaa gaacgtggtc
     1861 ggcgatcgga tgcgccgggc cgagcgccga ggtgaggacc aggcgcacct tgttctgctc
     1921 gaggaggtag ctggcccggt cccggacccc cgtttcgggg ccgcgatagg ccttcagctg
     1981 gaacccgaag gcggagcggt agtactgggc ggcctgcttg gcgttgccga cgtagaactc
     2041 gacgaagtcg gtgccgttga tggggaaggt atcggtcgcc tcgccggcgg cgggcatggt
     2101 gtcggtctgc atggtctctc cctgacctct gtcatggagc gggtctgggg ctcaagataa
     2161 cccgcccgaa ggcgccccac cacacgttac gcccggcgca ccatccgccc gacctcatgg
     2221 gctaagtctt cgctggtgaa cggtttctgc aggaagggtt gctcccctct gaggaggccg
     2281 cgggccagga tatcgtccct ggggtagccg gacatgtaca ggatggggag atcgggatgc
     2341 agccggtgca cttccccctc gagctcctcc gttcccatgt cgggcaccac cacgtcggtg
     2401 agcaggagat ccggctggtt gccacggttt cgaaggcgga ccagcgcttc ggccccattc
     2461 ctggccaaca ccacctcgta tccgcggtcc cggaggacac gagcggtgag ctcacgaacc
     2521 gcgtcctcgt cctccaggac gaggaccgtc tctccactcg cgcggagact cgccggcttg
     2581 gcgacggtcg ccggctg
//
LOCUS       DASUYN010000294         3502 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_978776, whole genome shotgun sequence.
ACCESSION   DASUYN010000294 DASUYN010000000
VERSION     DASUYN010000294.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3502
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_978776"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            187..1935
                     /locus_tag="VF061_05860"
     CDS             187..1935
                     /locus_tag="VF061_05860"
                     /inference="COORDINATES: protein motif:HMM:NF019850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase family protein"
                     /protein_id="HEX6669061.1"
                     /translation="MKLLDSRRLTGPGLLLDRAGAVIDVQVDDERREAVIAAWREAAT
                     RMLAAVGWEGERLAVRRYQGGASLAFTAPPDALYAATEVNDWAWSVAAAVAAGGRPGL
                     AGPELAAAAERLGAAIAEERRPALLALRDAARARRVSFLVGEDEASVGSGIGVKCWPV
                     DDLPEPSRVRWDEVRDVPIALITGSNGKTTVVRLLAAMAKTAGRSAGMSSTEGVTVGD
                     RRVAEGDYSGPEGSRHVLRHPEVEVAVLETARGGLLRRGLPVERADVAVVTNIAADHL
                     GEFGVRSLEELAETKLLVARAVDARGRVVLNADDATLVQAAAGVRAPVVWFSTDFANP
                     LVWRHVDSGGQAALLDGESLALLGNGRRELLGRVADIPVAAGGAARYNLANALAAAAA
                     AVGLGIPLDAIRATLCRFGLDPSDNPGRANVYELDGVLIVVDYAHNPHGLTALAAALD
                     QVPSRRRLVMIGQAGDRDDDAIRELARTALTLRPDRVVAKEMDAYLRGRARGEVSGIM
                     ADELRRAGLPEEAVATAPGEVQGVREALEWARPGDLLVLALHQERREVEELLRSGGWK
                     VGTLTRCTSDPPLPSP"
     gene            2032..2859
                     /locus_tag="VF061_05865"
     CDS             2032..2859
                     /locus_tag="VF061_05865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HEX6669062.1"
                     /translation="MVHAAVAALAVTLSARTPEVEEPEPERTPDRSRQVEMIYLPPPP
                     PAPPPPPAAEPPPPPPPPPARPTPPPQPTAPPPERQRREPEDRANAPPEAVRSEGEEA
                     DEPEGASDPEAPVEPPRAEAPAAAAPTMESEALRIFGRRRVATAPGVGPRAVRPLETY
                     LPDRPDKCVPTPKPPADSAAPMQFGTVVGRIFREEGGRPLPGAHLHMLGTPYVTFTDS
                     DGEYRFQFDLSLMDNCRTQYVRVTAKGYESRLLVLVVGQNVRSEDVHLQRRSSWPGL"
     gene            2869..3381
                     /locus_tag="VF061_05870"
     CDS             2869..3381
                     /locus_tag="VF061_05870"
                     /inference="COORDINATES: protein motif:HMM:NF015331.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEX6669063.1"
                     /translation="MTQPRNVRHTTAAGGGVLEASLVLPVPRSQVFAFFAAAENLEAI
                     TPPELRFRILTPSPIAMRPGAVIDYSLRLWGFPLEWRTLISRWEPPVLFVDEQVRGPY
                     RTWVHAHRFSEMGDGQTLIEDEVRYELPWQPAGMLARPVVERQLGRIFRYRQRRVREL
                     LVTRQVTARR"
BASE COUNT          467 a         1208 c         1376 g          451 t
ORIGIN      
        1 cgggaagcag gtgatccagt tcacccccgg cggcgacggc cgacccttcg agcgggtacg
       61 gacctcgcga ccggagccgg tgctggcggg ggtggagccc acgctggagg agggccggcg
      121 cgagttcgtc cgggatctca ggggtgtgcg gctgcgccgg gagtcggacg actaggtatc
      181 cggccgatga aactgctcga ttcccgacgg ctcaccggac cggggcttct gctcgatcgc
      241 gcgggggccg tgatcgacgt ccaggtggat gacgagcgcc gggaggcggt catcgccgcc
      301 tggcgcgagg ccgcgacgcg gatgctggcg gccgtgggct gggaggggga gcggctggcg
      361 gtgcggcggt accagggcgg ggcgagcctc gcgttcaccg cgccgccgga cgcgctctac
      421 gcggcgacgg aggtgaacga ctgggcctgg agcgtcgccg ctgccgtggc tgcagggggg
      481 cgcccggggc tcgcagggcc ggagctcgcg gcggccgccg agcgactggg cgccgccatc
      541 gcggaggaac ggcggccggc gctgctcgcc ctgcgcgacg cggcccgcgc gcggcgggtg
      601 agctttctgg tcggcgagga cgaagcctcc gtcggcagcg gcatcggggt gaagtgctgg
      661 ccggtggacg acctgccgga gccctcacgg gtccgctggg acgaagtgcg cgacgttccc
      721 atcgcgctga tcaccggctc caacgggaag accacggtgg tgcggctgct cgccgccatg
      781 gcgaagaccg cggggcggtc ggccgggatg agctcgaccg agggcgtgac ggtgggcgac
      841 cgaagggtgg ccgaggggga ctactccggc ccggagggca gccgccacgt gctccggcat
      901 cccgaggtgg aggtcgcggt gctggagacc gcgcggggcg gactgctgcg gcggggcctg
      961 ccggtcgagc gggccgacgt ggcggtggtc accaacatcg cggccgacca tctgggcgag
     1021 ttcggggtga ggagtctgga ggagctggcg gagacgaagc tcctggtggc ccgcgcggtg
     1081 gatgcgcgag gccgggtggt gctgaacgcc gacgacgcga cgctggtgca ggcggcggcc
     1141 ggcgtgcggg cgccggtggt gtggttctcc accgatttcg cgaacccact cgtgtggcgg
     1201 catgtggact cggggggaca ggcggccctc ctcgatggcg agtcgctggc tctgctgggg
     1261 aatgggcgtc gcgagctgct gggacgggtc gcggacatcc cggtcgccgc gggtggcgcg
     1321 gcgcgctaca atctggccaa cgctctcgcc gcggcggccg cggccgtggg cctcggcatc
     1381 ccgctcgacg cgatccgggc gacgctctgc cggttcgggc tcgacccctc ggacaatccc
     1441 ggtcgcgcca acgtctacga gctcgacggg gtgctcatcg tggtggacta cgcccacaac
     1501 ccgcatgggc tgaccgcgct cgccgccgcg ctggaccagg tgccttctcg gcgacggctg
     1561 gtgatgatcg gacaggcagg cgaccgggac gacgacgcga tccgggaact ggcccgcacc
     1621 gccctgacgc tccgcccgga ccgggtggtg gccaaggaga tggacgccta tctgcgcggc
     1681 cgcgcacggg gtgaggtgtc ggggatcatg gccgacgagc tgcggcgggc ggggcttccg
     1741 gaggaggccg tggcgaccgc gcccggggag gtgcagggtg tgcgggaggc gctggagtgg
     1801 gcccggccgg gagacctgct ggtgctggcg ctgcaccagg agcggaggga ggtggaggag
     1861 ttgttgcgga gcggggggtg gaaggttggg acgctgacac ggtgcacgtc cgatccccca
     1921 ttaccttccc cgtgacaccc tcaccgccga ggacgttccg ggttgccaca gcagctggtc
     1981 cctcttccac ccagaccccg cagatcctgg acttccctcg ctgccagtgc cgtggtccat
     2041 gcggcggtgg ccgcgctggc ggtgacgctt tcggcccgga cacccgaggt ggaagagccc
     2101 gagcccgagc gcacgccgga tcggtcccgt caggtggaga tgatctatct cccgcctccg
     2161 cctcccgctc cgccgccccc gccagcggcg gagcccccgc ccccgccccc acccccaccg
     2221 gcgcggccga caccgccgcc ccagcccacc gcgccgcccc ccgagcggca gcgacgggag
     2281 ccggaggacc gcgcgaacgc gccgccggag gcggtccgga gcgaaggcga ggaggcggac
     2341 gagccggagg gcgcgtccga ccccgaggcg ccggtggagc ctccccgggc cgaagccccc
     2401 gcggccgcgg cacccacaat ggaatcggag gccctgcgga tcttcgggcg gcgccgcgtg
     2461 gcgacggcgc caggcgtcgg gccccgggcg gtacggccgc tggagaccta cctcccggac
     2521 cgtcccgaca agtgcgtgcc gacgccgaag ccgccggcgg actcggcggc gcccatgcag
     2581 ttcgggaccg tggtgggccg catcttccgc gaggagggcg gccgcccgct ccccggcgcc
     2641 cacctgcaca tgctgggcac accctacgtg acgttcaccg acagcgacgg cgagtaccgc
     2701 ttccagttcg acctctcgct gatggacaac tgtcggaccc agtacgtgcg agtgacggcg
     2761 aagggctatg agtcgcggct gctggtgctg gtggtggggc agaacgtgcg gagcgaggac
     2821 gtgcacctgc agcggcggtc gagctggccc gggttgtagc ggcgcgcgat gacgcagcca
     2881 cgcaacgtgc gtcacacgac cgcggcgggc ggcggcgtcc tcgaggcatc gctggtcctg
     2941 cccgtgcccc gctcccaggt cttcgcgttc ttcgcggccg ccgagaacct cgaagccatc
     3001 accccgcccg agctgcgctt ccggatcctg acgccttcac ccatcgcgat gcggccgggc
     3061 gccgtgatcg actactcgct ccggctctgg ggcttccccc tggaatggcg tacgctcatc
     3121 agccggtggg aaccgccggt gctgttcgtg gacgaacagg ttcggggtcc ctaccggacc
     3181 tgggtacacg cgcaccggtt ctccgagatg ggcgacgggc aaacgctgat cgaggacgaa
     3241 gtgcgctacg aactgccgtg gcaaccggcc ggcatgctgg cgcgcccggt ggtcgagcgc
     3301 caactgggac ggatcttccg ctaccggcag cggcgagtgc gggagctgct cgtcacccgg
     3361 caggtgacgg ccaggcggtg atagggcctt agacgaacac cagggccgcc gccgccagca
     3421 ccagcgcggc gatcgccgtc cagagcggaa cccgcgaggg cgccgagcgg cgctccaact
     3481 ccacgagcgc ggtccccgtc cc
//
LOCUS       DASUYN010000295         3529 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_318012, whole genome shotgun sequence.
ACCESSION   DASUYN010000295 DASUYN010000000
VERSION     DASUYN010000295.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3529)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3529)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3529
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_318012"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1204)
                     /locus_tag="VF061_05875"
     CDS             complement(<1..1204)
                     /locus_tag="VF061_05875"
                     /EC_number="1.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent dehydrogenase, methanol/ethanol
                     family"
                     /protein_id="HEX6669064.1"
                     /translation="MAAGDYANTRFSGLDQITTNNVAGLQVSWTFSTGVLRGQEAAPI
                     VVGRTMYVVTPFPNVLHALDLTKPGATRWSYEPKPVSAAQGVACCDVVNRGAAYADGR
                     VFFNTLDNHTVAVDAETGRERWRTRLGDINRGETMTMAPLVVKGRVLVGNSGGELGVR
                     GWITALDAVTGEITWRAYSTGPDAEVLLGDRFKPFYAADRGPDLGVKSWPGDAWKTGG
                     GTVWGFVSYDPDLDLIYYGTANPGPWNPDVRPGDNKWTSAVFARDPDDGQGVWAYQWN
                     PHDVYDHDGINENVLLDLDWRGTPRKALVHADRNGYVYVLDRTTGEVLSAEPFHHITA
                     YRGVDLRTGRVQPVAEKQPRTGIVVRMICPGSPGAKDWQPMAWSPRTRLLYVPHQNLC
                     MDFEGTEAN"
     gene            complement(1484..2005)
                     /locus_tag="VF061_05880"
     CDS             complement(1484..2005)
                     /locus_tag="VF061_05880"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX6669065.1"
                     /translation="MPTVRVVRTYLEMLAADELRPAGVPRDAPRIERMEECPGSFFRY
                     LYAEVGRAYHWTDRLSWSDEQVRAHLADSHVSLWLLSSRAAPAGYFELRRHQDGSVEV
                     AYFGLLPEFVGRGWGGHLLTVAVREAWALQPERVWLHTCTLDHPAALPNYMKRGFRPV
                     REEVYTAQLPDST"
     gene            complement(2103..2687)
                     /locus_tag="VF061_05885"
     CDS             complement(2103..2687)
                     /locus_tag="VF061_05885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669066.1"
                     /translation="MKTLWILAAAATFTACANRSDEEVGAAPDRGDTTAVTTEVDTTT
                     GQWDTTGATGDVTAPSDTGMAMPSDTALTPTTPSDTTVGQYPTPSDAGVDTSGYGDVG
                     TDTTLTAPDTGAYPADTGAYVPDTGAAGVDTTSYDPSAADPSAADPSLDPSTGTDTSG
                     MDSGMGTDTTSSTAEPSVPADPGASEPTSETTPQ"
     gene            complement(2930..>3529)
                     /locus_tag="VF061_05890"
     CDS             complement(2930..>3529)
                     /locus_tag="VF061_05890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetoacetate--CoA ligase"
                     /protein_id="HEX6669067.1"
                     /translation="FDESGTPVRERDGELVCTRPFPSMPVAFWNDPDGAKYRSAYFDH
                     YPGVWRHGDWARLTEHDGLVITGRSDATLNPGGVRIGTAEIYRQVEQLPEVVESLVVG
                     QEWEGDVRIVLFVRLRPGAELDQGLEDRIRRRIRENASPHHVPKRIVAVADIPRTISG
                     KITELAVRDVIHGRPVSNTEALANPEALELFRALPQLRQ"
BASE COUNT          517 a         1202 c         1229 g          581 t
ORIGIN      
        1 agttcgcctc ggtgccctcg aaatccatgc agaggttctg gtgcggtacg tacagcagcc
       61 gggtgcgcgg cgaccacgcc atcggctgcc agtccttggc ccccggcgac ccggggcaga
      121 tcatgcggac gacgatgccg gtccgcggtt gcttctccgc aaccggttgc acccgcccgg
      181 tgcgcaggtc cacaccgcgg taggcggtga tgtgatggaa cggctcggcc gagagtacct
      241 cgccggtggt gcggtcgagc acgtacacgt agccgttccg gtcggcatgc accagcgcct
      301 tgcgaggcgt gccccgccag tcgaggtcca gcagcacgtt ctcgttgatg ccgtcgtgat
      361 cgtacacgtc gtgcgggttc cactggtagg cccagacgcc ctgcccgtcg tcgggatcgc
      421 gcgcgaacac ggccgaggtc cacttgttgt cgccgggacg cacgtccggg ttccacgggc
      481 ccgggttggc cgtgccgtag tagatgaggt cgaggtcggg gtcgtaggag acgaaccccc
      541 agacggtccc gccgcccgtc ttccaggcgt caccgggcca gctcttcacc ccgaggtcgg
      601 gaccccggtc ggccgcgtag aagggcttga agcgatcgcc gagcaatacc tccgcatcgg
      661 gcccggtgct gtatgcgcgc caggtgattt ccccggtgac ggcgtcgaga gcggtgatcc
      721 acccccggac acccagctcg ccgccgctgt tccccaccag tacccgtccc ttcaccacca
      781 gcggcgccat agtcatcgtc tcgccccggt tgatgtcgcc cagccgggtc cgccagcgct
      841 ccctgccggt ctccgcgtcg acggccacgg tgtggttgtc cagggtgttg aagaagaccc
      901 ggccgtcggc atacgccgcc ccccggttga ccacgtcgca gcaggcgacc ccctgggccg
      961 cggagaccgg cttcggctca taggaccacc gggtcgcacc gggcttggtg aggtcgagag
     1021 cgtgcaggac gttgggaaac ggtgtgacga cgtacatcgt ccgcccgacg acgatcggcg
     1081 ccgcctcctg gccgcgcagc acaccggtcg agaaggtcca cgaaacctgg agtccggcga
     1141 cgttgttggt ggtgatctgg tcgaggccgc tgaagcgcgt gttggcgtaa tcaccagcgg
     1201 ccatcggcca gtcgccgtcg gcggggccgg acgccgagcc agcgtgtgtc gcaccggcgc
     1261 tcgatcgcgc agcgagcgaa cgaccggtcg atagggtcgc gggactctcc gtagaccggg
     1321 cgctgggctg ggcctcggag caggcgaggg agaggagtat cgcaccgagc gcgagcggag
     1381 gtctggccat tgatatcacc cgtgagggcc gccacgatcg gccatccgtt ggttcgtgcg
     1441 ggtgatgtat ggctccttca ggggagcgct gccgcgatct agatcacgta gaatccggca
     1501 gttgggccgt gtagacctcc tcccgcactg ggcggaagcc gcgtttcatg tagttgggca
     1561 gggccgccgg gtggtccagg gtacaggtgt gaagccagac ccgctccggc tgcagggccc
     1621 aggcctcacg cacggcgacc gtgagcaggt ggccgcccca tccccgtccc acgaactccg
     1681 gcagcagccc gaagtaggcc acctccaccg acccgtcctg gtgccgccga agctcgaagt
     1741 acccggccgg tgccgctctc gagctcaaca gccagaggga cacgtgggaa tcggcgaggt
     1801 gggccctcac ctgctcgtca ctccacgaga gtcggtcggt ccagtggtag gcgcgcccca
     1861 cttctgcgta gaggtagcgg aagaacgacc ccgggcattc ctccatgcgc tcgatccggg
     1921 gagcgtcccg gggtactccg gccgggcgaa gctcgtcggc ggccagcatc tcgagatagg
     1981 tgcgcaccac gcgaacggtc ggcatggcgg ctatactagc cgtcgcctct ccccggcgcc
     2041 atcggacaaa cgaaaggccc cggattgctc aggggccttc gtcctgctgt cagccagcca
     2101 gcttactgag gggtggtctc ggaagtcggc tcggacgcac ccggatcggc cggaacgctg
     2161 ggctcggccg tgctcgaagt ggtgtcggtg cccatgccgc tgtccatgcc gctggtgtcc
     2221 gtgccggtcg aaggatcgag cgacggatcc gccgccgagg ggtcggccgc agacggatca
     2281 tagctggtgg tgtccacgcc agccgcgccg gtatccggca cgtacgcgcc ggtgtccgcg
     2341 gggtaggcgc cggtgtcggg cgcggtcagc gtggtatcgg tgcccacgtc gccgtagccg
     2401 gaggtgtcga caccggcatc gctcggcgtc gggtactgac cgaccgtcgt atcgctcggc
     2461 gtggtcgggg tgagggcggt gtcgctgggc atcgccatcc cggtgtcgct gggggcggtg
     2521 acgtcgccgg tggccccggt ggtgtcccac tggccggtcg tggtatccac ctcggtggtg
     2581 acggcggtgg tgtcgccgcg atcgggggcc gctccgacct cctcatcgct gcggttggcg
     2641 cacgccgtga aggttgcggc ggcagccagg atccaaagcg tcttcatagc gttcttcccc
     2701 taatcgtcga agtcttgccc gctccgggca tcgtcaatca cccgactggg agacgggcca
     2761 cgggtatcga ttcgtttcgc gagccaaacc taaggcccga cggggtctcg ggactaggtc
     2821 acagatcaca atttccgatc ctgccgcccg gaagtaaccc gaagcgtgga tatcatttcc
     2881 atgacggccc tccgggatca ccccgggggc aattccggct ggtcggcgcc tattgccgga
     2941 gctggggcag cgcccggaag agctccagtg cctcggggtt ggcgagcgcc tcggtattgc
     3001 tcaccgggcg cccgtggatc acgtcccgga cggccagttc ggtgatcttg ccgctgatcg
     3061 tcctggggat atcggccacc gccacgatcc gcttcgggac gtggtgagga ctcgcattct
     3121 cgcggatgcg gcgccggatg cgatcctcca gcccctggtc cagttccgca cccggccgca
     3181 gccggacgaa gagcacgatc cggacgtccc cctcccactc ctgccccacg accaggctct
     3241 cgaccacctc ggggagctgc tccacctgcc ggtagatctc cgcagtcccg atgcggacgc
     3301 cgccgggatt gagggtagca tcgctgcgac cggtgatcac caggccgtcg tgctcggtca
     3361 gccgcgccca gtccccgtgg cgccacaccc cggggtagtg gtcgaagtag gcggagcggt
     3421 acttggcgcc gtcggggtcg ttccagaagg ccaccggcat gctggggaac ggccgggtac
     3481 agaccagctc cccgtcgcgc tcccgcaccg gggtgccgct ctcgtcgaa
//
LOCUS       DASUYN010000296         5337 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_318807, whole genome shotgun sequence.
ACCESSION   DASUYN010000296 DASUYN010000000
VERSION     DASUYN010000296.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5337)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5337)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5337
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_318807"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..975
                     /locus_tag="VF061_05895"
     CDS             <1..975
                     /locus_tag="VF061_05895"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEX6669068.1"
                     /translation="TLSQAQLARQVGNQSEFDLLRARVTRDNQRPIVIQRQAARDLAY
                     YQLKHLLNLPPEQPLELTSRLVDTALVRTARLGQLVDAPGDTATDARAPVRQADQVVA
                     AQQGLLRAARAQRWPQVSLTSDYAEIGYPNDVSPFGPNYLSDWVVAVGLQVPLFTGGR
                     VKGDVAVAEAGLEQARLRLRQTRELAQLDARNTQLQLATAVAAWEASAGTEEQADRAY
                     EIAEVRYREGISTQTELNDLRIQLAQAQANRAQAARDLQVARTRLALLPSLPLGTSTG
                     AAEAAGAPAVSPPGGQGGGSGTTPPYQAPQTQAQGAFTSTRQTGVVGQ"
     gene            972..2078
                     /locus_tag="VF061_05900"
     CDS             972..2078
                     /locus_tag="VF061_05900"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX6669069.1"
                     /translation="MIRQQLHLALAAALVLAGCGRDDGAGAATVETAEAVVTVGPENI
                     AVATLSELRSGPAVSGSLEPEQAATVRAEVAGAVLRTYVDAGERVQRGKLLARLDDRT
                     VEESFLSARSAVRTAETALALARRNLERTERLEQAGALAERDLETARLEVTNAEGTLA
                     DARARLSNAQEQREDTRVRAPFDGIVSEREVDAGDVVQVGASLFSIVDPSRLRLEASV
                     PAEQIGRLRRGTDVEFTVTGLERRITGSIERINPVVDPATRQVRIYVAIPNQDQALVA
                     GLFAEGRIATDTKRAVAVPVAAVDSRGNAPTVHLIRDGRVAEVEIQLGVRDEAAELVE
                     IQAGVADGDTVLLGSAQGVTTGSRIRVLLEEAGR"
     gene            2079..>5337
                     /locus_tag="VF061_05905"
     CDS             2079..>5337
                     /locus_tag="VF061_05905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX6669070.1"
                     /translation="MFISDFAIRRPIVTVTAMLALVAFGIAALVNLDTDEFPDIQQPI
                     VGVTILYPGASPETVEREIVDPIEEAFSTISGVDWSRTQASATDGLAQFVVFFDFEKD
                     VQEASQDIRDAISTQRADLPTEMEEPVLTRFDPSQQSVLSLALTSSQLSAAALTRIAD
                     PMIVRDLRTVPGVAQVTVVGALERELTVQVRPADMQAAGISVAQVVQALEAQNLAAPV
                     GRLNGALDERAIRLKGRLDTPGDFAQLVVAEREGQIIRLGQIATVLDGTEEQRDLARF
                     DDRDAVGIEILKAKGYSTTQVTDLIHEHVAALQRRMPPGVQLEVVQDAGLRVHNAVAN
                     VQEALIEGALLTVLVVFLFLNSWRSTVITGLALPVSVLASFIAVWAFGFTLNTMSLMG
                     LSLAIGILIDDAIVVRENIVRHIEMGKDHYEASREGTDEIGLAVAATTFSIVAVFVPV
                     AFMYGISGQWFKPFALTIACSVLVSLFVSFSLDPMLSAYWPDPQTEAHERRNPIARLL
                     DRFNRWFDRMADRYKDLIAWALDHRLMMIGLATGTFLAALTIPARGVLAALVVLGGLW
                     LVFWILAKPMVRRLGRLRAVGLKLAGTVAVLAVMGLLLPRVPVIGQVGAGFVPISDRS
                     EISMIVEAPPGSNLEYTRMKAEEAARRARAHPEVAYTYTTVGTPVPLKTPSVDQALVY
                     VRLVPKAERELHQEELGQRLREEMSRIGGAQVSVFTSGFGGAIKSIQIQMKGEDARVL
                     TTLAQRAAQDVVAKVPGAVDVGLSTRGQKPELEVQLNRGLAGSLGITVGQVAQSLRPA
                     FAGIDAGDWVDPSGETRDVTVRLAPEARERVTDLARLPLVVSGADGALATLPLGQVAT
                     ITQGMGPAQIDHLDRDKVVIIQANVSGRPLTQVTNDIREGLARFNLPPGYEITYGGES
                     QDQAEVFTRIFTALGVAVLLMYLILVVQFGSFLDPLAILVSLPLSLIGVVLALWITRD
                     TLNIMSLIGVILLMGIVAKNAILLIDFAKWARARGEPLREALIEAGRIRLRPIIMTTL
                     ALIAGMIPVAIGHGEGADFRAPLGRAVIGGTITSTFLTLLVIPTVYEIMVEWREKL"
BASE COUNT          762 a         1855 c         1957 g          763 t
ORIGIN      
        1 acgctcagcc aggcgcagct cgcccggcag gtggggaacc agtcggagtt cgatctcctg
       61 cgcgcgcggg tgactcgcga caaccagcgg ccgatcgtga tccagcggca ggccgcgcgc
      121 gacctcgcct actatcagct caagcacctg ctgaaccttc cccccgagca gcccctcgag
      181 ctcaccagcc gattggtgga cacggccctg gtgcgaacgg cgcgcctcgg gcagctcgtg
      241 gatgcgccgg gcgacaccgc gaccgacgcc agagcaccgg tgcgccaggc ggaccaggtg
      301 gtggccgcgc agcagggcct gctccgcgcc gcgcgagcgc agcgctggcc gcaggtctcc
      361 ctcacctcgg actacgccga gatcggatac cccaacgacg tctcgccgtt cggtcccaac
      421 tacctctccg actgggtggt cgcggtggga ctgcaggtcc cgctcttcac cggcggccgc
      481 gtcaaggggg atgtcgcggt cgcggaggcg ggactggagc aggcccgtct gcggctccgg
      541 cagacccgcg agctggccca gctcgacgcg cgcaacaccc agctccagct cgccaccgcg
      601 gtcgccgcct gggaggcgag cgccgggacc gaggagcagg cggaccgcgc ctacgagatt
      661 gccgaagtgc gctaccgcga ggggatctcg acccagaccg agctcaacga tctccgcatt
      721 cagctggccc aggcgcaggc gaaccgggcg caggccgcgc gggacctcca ggtggcgcgg
      781 acgcggctcg cgctgctccc ctcgctgccg ctcggcacct cgaccggcgc ggcggaggcg
      841 gcgggagccc ccgccgtgag cccccccggc gggcagggcg gcggctcggg gacgacgccg
      901 ccgtatcagg cgccccagac ccaggcccag ggagccttca ccagcacgcg acagacggga
      961 gtggtcgggc aatgatccgg cagcagcttc acctggcgct cgcggcagcg ctcgtcctcg
     1021 ccgggtgcgg ccgcgacgac ggcgccggcg ccgcgaccgt cgaaaccgcc gaggcggtgg
     1081 tgacggtggg ccccgagaac atcgcggtgg ccacgctgtc cgagctccgg agcggccccg
     1141 ccgtctcggg ctcgctcgag ccggagcagg cggcgaccgt gcgcgccgag gtcgccggcg
     1201 cggtgctgcg cacctacgtg gacgccggcg agcgggtgca gcggggcaag ctcctcgccc
     1261 gactcgacga ccggaccgtg gaagagagct tcctctccgc ccgctcggcg gtccgcacgg
     1321 cggagacggc cctggcgctg gcgcgccgca acctcgagcg caccgagcgg ctggagcagg
     1381 cgggcgcgct ggcggagcgc gacctggaga ccgcgcggct cgaggtgacc aacgccgagg
     1441 gcaccctggc ggatgcccgg gcccggctca gcaacgcgca ggagcagcgg gaggacaccc
     1501 gggtgcgggc gccgttcgac gggatcgtga gcgagcggga ggtcgacgcg ggtgacgtgg
     1561 tgcaggtggg cgcctcgctc ttctccatcg tggacccgag ccggctgcgg ctggaggcga
     1621 gcgtgcccgc ggagcagatc gggcggcttc ggcgggggac ggacgtggag ttcaccgtca
     1681 ccggcctgga gcgccggatc accggcagca tcgagcggat caacccggtc gtggacccgg
     1741 ccacgcgcca ggtccggatc tacgtggcga tcccgaacca ggatcaggcg ctggtggccg
     1801 gcctgttcgc cgaaggacgg atcgcgaccg acaccaagcg cgcggtcgcg gtgcctgtgg
     1861 ccgcggtcga cagccgcggc aacgcgccca cggtccatct gatccgggac ggccgggtcg
     1921 cggaggtcga gatccagctc ggcgtgcggg acgaggccgc cgagctggtg gagattcagg
     1981 ccggcgtcgc ggacggggat acggtgctgc tgggctccgc ccagggtgtc accacgggca
     2041 gccggatccg ggtgctgctg gaggaggcgg ggcgctagat gttcatctcc gatttcgcga
     2101 tccggcggcc gatcgtcacc gtcaccgcca tgctggcgct ggtggcgttc ggcatcgccg
     2161 cgctggtgaa cctcgacacc gacgagtttc ccgacatcca gcagcccatc gtcggggtga
     2221 cgatcctcta tcccggcgcc tcgcccgaga cggtggagcg cgagatcgtg gacccgatcg
     2281 aggaggcttt ctccaccatc agcggggtgg actggtcgcg cacccaggcc agcgcgacgg
     2341 acgggctggc ccagttcgtc gtcttcttcg atttcgagaa ggacgtccag gaagcctccc
     2401 aggacatccg cgacgccatc tccacccaac gggccgatct gcctacggag atggaggagc
     2461 cggtgctcac ccggttcgat ccgtcccagc agtcggtcct ttccctggcc ctcacctcgt
     2521 cgcagctctc cgcggccgcg ctgacccgca tcgccgaccc gatgatcgtg cgcgacctgc
     2581 gcaccgtgcc cggggtggcc caggtgacgg tcgtcggcgc gctggagcgg gagctcaccg
     2641 tgcaggtccg gccggcggac atgcaggcgg cggggatcag cgtcgcgcag gtggtgcagg
     2701 ccctggaggc gcagaacctg gccgcccccg tggggcggct caacggggcg ctggacgagc
     2761 gcgccatccg gctcaagggt cggctcgaca cgccgggcga cttcgcccag ctggtggtgg
     2821 ccgagcgcga ggggcagatc atccgcctgg ggcagatcgc caccgtgctc gacggcactg
     2881 aggagcagcg cgacctggcg cgcttcgacg accgggacgc cgtcgggatc gagatcctca
     2941 aggcgaaggg ctacagcacc acccaggtga ccgacctcat ccacgagcac gtcgcggcac
     3001 tccagcggcg gatgccgccc ggcgtccagc tggaggtggt gcaggacgcg gggctccggg
     3061 tgcacaacgc ggtcgccaac gtccaggaag cgctgatcga gggcgccctc ctcaccgtgc
     3121 tggtcgtgtt cctgttcctc aacagctggc gctccaccgt gatcaccggc ctcgcgcttc
     3181 cggtgagcgt gctcgcgtcc ttcatcgcgg tgtgggcctt cggcttcacg ctcaacacga
     3241 tgtcgctgat ggggctctcg ctcgcgatcg gcatcctgat cgacgatgcg atcgtggtgc
     3301 gcgagaacat cgtccgccac atcgagatgg gaaaggacca ctacgaggcg tcccgcgagg
     3361 ggaccgacga gatcgggctc gcggtggcgg ccacgacgtt ttccatcgtg gcggtgttcg
     3421 tgccggtggc gttcatgtac ggcatctccg gccagtggtt caagccgttc gccctcacca
     3481 tcgcctgctc ggtgctggtg tcgctcttcg tctccttctc gctcgacccg atgctctcgg
     3541 cctactggcc cgacccgcag acggaggcgc acgagcggcg caatccgatc gcccggctgc
     3601 tggaccggtt caaccgctgg ttcgatcgga tggccgaccg ctacaaggat ctgatcgcct
     3661 gggcgctgga ccacaggctg atgatgatcg gcctcgccac ggggacgttt ctcgcggcgc
     3721 tgaccatccc ggcccgcggg gtgctggcgg cgctggtggt gctcggaggc ctctggctgg
     3781 tgttctggat cctggccaag ccgatggtcc ggcggctcgg ccggctgcgg gcggtcgggc
     3841 tgaagctggc cggcacggtc gcggtgctgg cggtgatggg gctcctgctc ccccgggtgc
     3901 cggtgatcgg gcaggtgggc gcgggcttcg tgccgatcag cgaccggagc gagatcagca
     3961 tgatcgtgga ggcgccgccg gggtccaatc tcgagtacac caggatgaag gccgaggagg
     4021 ccgcccgacg ggcgcgagct catccggaag tggcgtacac ctacaccacc gtgggcaccc
     4081 ccgtaccgct caagacgccc tcggtcgacc aggcgctggt gtacgtgcgg ctggtaccga
     4141 aagcggagcg ggagctgcac caggaggagc tgggacagcg gctccgcgag gagatgtcgc
     4201 ggatcggcgg ggcgcaggtc tcggtcttca ccagcggctt cggcggggcc atcaagtcga
     4261 tccagatcca gatgaagggc gaggacgccc gggtgctcac gacgctggcc cagcgcgccg
     4321 cgcaggacgt ggtcgccaag gtgccgggcg cggtggacgt gggactctcg acccggggcc
     4381 agaagcccga gctggaggtg cagctcaacc gcgggctggc gggctcgctg ggcatcacgg
     4441 tgggccaggt ggcccagtcg ctgcggcccg cgttcgcggg catcgacgcg ggggactggg
     4501 tggatccctc cggtgagacc cgcgacgtga ccgtgcggct cgcgccggag gcccgggagc
     4561 gggtgaccga tctcgcgcgg ctcccgctgg tggtgagcgg agcggacggg gccctggcga
     4621 ccctgccgct gggccaggtc gcgacgatca cgcagggcat gggacccgcg cagatcgacc
     4681 atctcgaccg cgacaaggtc gtgatcatcc aggcgaacgt gtcgggtcgg ccgctcaccc
     4741 aggtcaccaa cgacattcgc gaaggcctgg cccgcttcaa cctgccgccg gggtacgaga
     4801 tcacctacgg cggggagtcc caggaccagg cggaggtgtt cacccgcatc ttcaccgcgc
     4861 tgggggtcgc cgtgctcctg atgtacctga tcctggtggt gcagttcggg tccttcctcg
     4921 acccgctggc catcctggtg tccctgccgc tctcgctgat cggcgtggtc ctcgcgctct
     4981 ggatcacccg ggacacgctc aacatcatga gtttgatcgg tgtcatcctg ctgatgggga
     5041 tcgtcgcgaa gaacgccatc ctgctgatcg atttcgccaa gtgggcccgg gcgcgcgggg
     5101 agccgcttcg cgaggcgctg atcgaggccg gccgcatccg gctccggccc atcatcatga
     5161 cgaccctcgc gctcatcgcc ggcatgatcc cggtggcgat cggccacggc gagggcgccg
     5221 acttccgggc gccgctcggc cgcgcggtca tcggcggcac catcacctcg acctttctga
     5281 ctctgctggt gatccccacc gtctacgaga tcatggtgga gtggcgcgag aagctcc
//
LOCUS       DASUYN010000297         2979 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1420144, whole genome shotgun sequence.
ACCESSION   DASUYN010000297 DASUYN010000000
VERSION     DASUYN010000297.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2979)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2979)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2979
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1420144"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..376)
                     /locus_tag="VF061_05910"
     CDS             complement(<1..376)
                     /locus_tag="VF061_05910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX6669071.1"
                     /translation="MKLIENISQLATCRGEGGQGEIHAISDAVMVWQGSTIRWVGPRP
                     ELPVEYWNAERIDAQGGTVVPGLIDCHTHLAFGGWRADEFTRRIEGASYLDIARAGGG
                     IAKTVRLTREAGAETLLRRARGF"
     gene            complement(412..2085)
                     /gene="hutU"
                     /locus_tag="VF061_05915"
     CDS             complement(412..2085)
                     /gene="hutU"
                     /locus_tag="VF061_05915"
                     /EC_number="4.2.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016153 - urocanate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006548 - histidine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urocanate hydratase"
                     /protein_id="HEX6669072.1"
                     /translation="MTAASATSPIHAPTGSSLSCKGWHQEAALRMLMNNLDPAVAERP
                     EELIVYGGSGKAARDWAAYERIVATLRRLENDETLLVQSGKPVGVFRTHEEAPRVLIA
                     NAHLVPRWATWDEFRRLEALGLTMYGQMTAGSWIYIGTQGILQGTYETFAECARQHFG
                     GTLEGRLVVTAGLGGMGGAQPLAATMNGAAFLGVDVDESRIRRRVETGYCDRLETELD
                     RALSLLDDARRARRPLSVGLVGNIAEVLPELVRRGVVPDVVTDQTSAHDLRLGYIPAG
                     CTLEAAGELRTRDPADYESRVLDSMSVHVRAMLDLQARGAVVFDYGNNLRGQVADHRR
                     MAEAFDIPGFVPAFIRPLFCKGAGPFRWVALSGDPADIAATDRAVLETFPRKDELARW
                     IRQAGERVQFQGLPARICWLEYGERAEMGLRFNWLVRHGKVSAPIVIGRDHLDTGSVA
                     SPNRETEGMRDGSDAIADWPLLNALLNTACGASWVSLHHGGGVGIGYSIHAGMVAVAD
                     GTPSGDRRLERVLTADPGTGVMRHADAGYELAIETARERGVDLPSVLDR"
     gene            2274..2777
                     /locus_tag="VF061_05920"
     CDS             2274..2777
                     /locus_tag="VF061_05920"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX6669073.1"
                     /translation="MDATLAASGDAHAFERLYRGHIARVHSLARRMLSEDEADEAAQD
                     VFVRAWEKLGTFRGEAAFGTWLHRLAINVILGRRERRGIQRQRYLEDDGVLETVAGRR
                     SAPETSMDMETAIAQLPDGARQIFVLHDVEGYRHEEIAEMLGLATGTSKSQLHRARMT
                     LRQHLDR"
     gene            2787..>2979
                     /locus_tag="VF061_05925"
     CDS             2787..>2979
                     /locus_tag="VF061_05925"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HEX6669074.1"
                     /translation="MSDQWTDRLSEYLDGEMKGSERAFLEAHLERCEDCQETLAGLRR
                     VVMRARSLEDRQPVADLWAG"
BASE COUNT          445 a         1071 c         1043 g          420 t
ORIGIN      
        1 cgaacccccg ggcgcggcgg agcagggtct cggcgccggc ctctcgggtg agacggaccg
       61 tcttcgcgat gcccccgccc gcccgggcga tgtcgagata gctcgcgcct tcgattcgcc
      121 gggtgaactc gtccgctcgc cacccgccga aggcgaggtg ggtgtggcag tcgatgaggc
      181 cggggaccac cgtgccaccc tgcgcgtcga tccgctccgc gttccagtat tcgacgggca
      241 gctccggtcg ggggcccacc caccggatcg tggagccctg ccagaccatg acggcatcgg
      301 agatagcatg gatctccccc tgcccaccct caccccggca ggtcgccagc tgggagatat
      361 tctcgatcag cttcatcccc gcgtcccctc gctcctcccc gccggccgga ctcagcgatc
      421 caggaccgac ggcagatcga caccccgctc ccgcgcggtc tcgatcgcca gctcgtagcc
      481 cgcgtcggcg tggcgcatga cgccggtgcc cgggtccgcc gtcagcaccc gctcgaggcg
      541 gcggtcgccc gagggggtac cgtccgcgac cgcgaccatg ccggcgtgga tcgagtagcc
      601 gatgcccacc ccgccgccgt gatgcagcga gacccagctc gcaccgcagg ccgtgttcag
      661 aagggcattg agcagcggcc agtcggcgat ggcatccgag ccgtcgcgca tcccttccgt
      721 ctcccggttg ggcgaggcca ccgagccggt gtcgagatgg tcgcgcccga tcacgatcgg
      781 ggccgagacc ttgccgtggc gcaccagcca gttgaaccgg aggcccatct ccgcccgctc
      841 gccgtactcc agccagcaga tgcgcgcggg aaggccctgg aactgcaccc gctcgccggc
      901 ctgccggatc cagcgcgcca gctcgtcctt ccgggggaac gtctccagca cggcccggtc
      961 ggtggcggcg atgtcggcgg gatcgccgga gagggcgacc caacggaacg gcccggcgcc
     1021 cttgcagaag agcggccgga tgaaggcggg gacgaatccc gggatgtcga aggcctccgc
     1081 catgcgccgg tgatcggcca cctgcccgcg gagattgttc ccgtagtcga acacgacggc
     1141 cccgcgggcc tgcagatcga gcatcgcgcg cacgtgcacg ctcatcgaat cgagcacccg
     1201 cgactcgtag tccgcgggat cgcgggtccg cagctccccg gccgcttcca gcgtgcagcc
     1261 cgccgggatg tagcccagcc ggagatcgtg ggccgaggtc tggtcggtca ccacgtcggg
     1321 gacgacaccg cgtcgcacca gctcgggcag cacctccgcg atgttgccga ccagtcccac
     1381 tgatagcggg cgccgcgccc gccgggcgtc gtccagcagg ctgagcgcgc ggtcgagctc
     1441 ggtctccagc cgatcgcagt agccggtctc cacccggcgg cggatccggc tctcgtccac
     1501 gtccacgccg aggaaagcgg ctccgttcat cgtcgccgcc aacggctggg cgccgcccat
     1561 cccgccgagc ccggcggtta ccaccagccg gccctccagc gtgccgccga agtgctgccg
     1621 cgcacactcg gcgaaggtct cgtaggtgcc ctggaggatg ccctgggtcc cgatgtagat
     1681 ccacgagccc gcggtcatct ggccgtacat ggtgagaccc agcgcctcca gtcgccggaa
     1741 ctcgtcccac gtggcccagc gcggcaccag atgggcgttc gcgatcagca cccgcggcgc
     1801 ttcctcgtgg gtgcggaaga cgcccaccgg cttaccgctc tggaccagca gcgtctcgtc
     1861 gttctccagc cggcgcaggg tcgcgacgat gcgctcgtac gcggcccagt cgcgcgcggc
     1921 ctttccgctg ccgccgtaga cgatcagctc ctccggccgt tccgcgacgg cggggtcgag
     1981 attgttcatc agcatccgga gcgccgcctc ctggtgccag cccttgcacg agaggctgga
     2041 gccggtgggc gcgtggatgg gggaggtggc ggacgcagcg gtcatcggtg gcaagatccc
     2101 tcgctgcgct cgggatgaca agagagatgg acggcccgac ggccctcccc ctaaccccca
     2161 cccaatgcaa cctttccccc tggtagccga tccaatacct cgcgatgacc cgaacccgtc
     2221 caggaccggt gaagctgcgg cgagatctgt cttccaaatc cgactcggat gccgtggacg
     2281 cgaccctggc cgccagcggg gatgcccatg ccttcgaacg gctgtaccgg ggccacatcg
     2341 cccgggtcca cagcctggcg cggcggatgt tgagcgagga cgaggcggac gaggccgccc
     2401 aggacgtgtt cgtgcgggcc tgggagaagc tggggacgtt ccggggggag gcggcgttcg
     2461 gcacctggct gcatcgactg gcgatcaatg tgatcctggg tcggcgggag cggcggggga
     2521 tacagcggca gcggtacctg gaggacgacg gcgtgctgga gacggtggcg gggcgccggt
     2581 cggccccgga gacctcgatg gacatggaga ccgcgatcgc gcagctcccc gacggcgccc
     2641 ggcagatctt cgtgttgcac gacgtcgagg ggtaccgcca cgaggagatc gccgagatgc
     2701 tggggctggc gaccggcacc tcgaagtccc agctgcaccg cgcccggatg acgctgcgcc
     2761 agcacctgga ccgataggag cgagtcatga gcgaccagtg gaccgaccgg ctgtccgagt
     2821 acctggacgg cgagatgaag gggtcggagc gggcgttcct cgaggcgcat ctcgagcgct
     2881 gcgaggattg ccaggagact ctggcgggcc tccgtcgggt agtgatgcga gcccgctctc
     2941 tcgaagaccg ccagccggtg gccgacctgt gggccggcg
//
LOCUS       DASUYN010000298         2726 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_319494, whole genome shotgun sequence.
ACCESSION   DASUYN010000298 DASUYN010000000
VERSION     DASUYN010000298.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2726)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2726)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2726
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_319494"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2726)
                     /locus_tag="VF061_05930"
     CDS             complement(<1..>2726)
                     /locus_tag="VF061_05930"
                     /inference="COORDINATES: protein motif:HMM:NF024883.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HEX6669075.1"
                     /translation="SLTHGNLEESAYGYVTHAITVGPVRGDYAAAYEYGTLALQVNER
                     FDDRRRRAKIHQQFHAHVNLWRRPMATCLPHAREACRSGLESGDFLYAVYGAATEAWP
                     AMHCTQDLAAFVREQLPNVALLEKLKAQGFADALRLVLNWGRALQGGTLTPLSLSDET
                     LAEAEYAARYRDQPFFAAIHGVLRLQLCCLFGETAAALETGRDVRAIISHLAGTIWPV
                     EFDFWHGLALAAGYGSAADGERRASLAELEMARRSLATLAEQCPENFLCQSLLLSAEI
                     ERAVGRPLAALDLYERAVAQAESTGLLRQVALANELCGRFGLERRHPRVAAVYLGAAR
                     RAWMRWGALAKVADLDRRFGPAAAAVPEDGEPWLGSGDDSLDLATVVKAARALAGEIE
                     LEALLEKLLGIAIENAGAERGALVLEHDGAPRVHARGAGAGVAVDVHDAPPLAGTDAV
                     PVVIVNHVRRTHDSLVLADARGDDRYRHDPYVLERATRSVIATPLLHQGRLLGVVYLE
                     NDLASGVFTPDRLALIQVVASQAAIAIQNAQLYAGLKRELADRARVETALRTISEGTA
                     ALTGLEFFRTVARLAAGTLESRYALVAEVVGERRDRVSTLAFWQDGGFGENVTYPLAG
                     TPCEDVIEGRVCHHPRGIQALFPRDRDLASLNAEGYLGVPLLGSTGAVVGHIALIHDR
                     PLLPEARDLAVLRIFASRAGTELERQRAEDALRESQLRYSTLAETVPEVLYTNLPDGS
                     CDYVSQRFLDFTGMAAADALGYGWTEALHPMDRDRSLAEWEAARTAGVPFDAEYRFRR
                     GDGEYRWFKARSIPMRDTDGAIVRWFGVCTDVDDAKRAEEALRAALTEVAQLRDRLQA
                     ENVYLLEEVKQQQGFEEIVGRSPPLQRVLRQVEQVAPTDTTVLITGETGTGK"
BASE COUNT          361 a         1041 c          951 g          373 t
ORIGIN      
        1 cttgccggtg ccggtctcgc cggtgatcag cacggtggtg tcggtgggcg cgacctgctc
       61 cacctggcgc agcacccgct gcagcggcgg actgcgcccc acgatctcct cgaagccctg
      121 ctgctgcttc acctcctcca gcaggtagac gttctccgcc tggagccggt cgcgcagctg
      181 cgccacctcg gtcagcgccg cgcggagcgc ctcctccgcg cgcttggcgt cgtccacgtc
      241 ggtgcagacg ccgaaccacc gcacgatcgc cccatccgtg tcccgcatcg ggatgctgcg
      301 cgccttgaac cagcggtact cgccgtcccc gcgccggaac cggtattcgg cgtcgaacgg
      361 caccccggcg gtgcgggcgg cctcccactc cgccaggctc cggtcgcggt ccatggggtg
      421 gagcgcctcg gtccagccgt agcccagcgc atccgccgcc gccattccgg tgaagtcgag
      481 gaagcgctgg ctcacgtagt cgcacgagcc gtcgggcaga ttggtgtaca gcacttccgg
      541 caccgtctcc gccagcgtgc tgtaccgaag ctggctctcc cggagggcgt cctccgcccg
      601 ctgccgctcc agctcggtgc cggcccggct ggcgaagatc cgcagcaccg ccagatcgcg
      661 ggcctcgggc agcagggggc ggtcgtggat cagcgcgatg tgacccacca ccgcgccggt
      721 agagccgagc aacggcacgc cgagatagcc ttccgcgttg aggctcgcga gatcgcggtc
      781 ccgggggaac agcgcctgga tccctcgcgg gtggtggcac acccggccct cgatcacgtc
      841 ctcgcagggg gtgccggcga gcgggtaggt gacgttctcg ccgaacccgc catcctgcca
      901 gaacgccagc gtgctcaccc ggtctctccg ctcgcccacc acctccgcca ccagcgcata
      961 gcgcgattcc agcgtcccgg ctgcgagccg cgccacggtg cggaagaact ccagcccggt
     1021 gagggcggcg gtgccctcgc tgatggtgcg cagcgcggtc tccacccgcg cccgatccgc
     1081 cagctcccgc ttgagccccg cgtagagctg ggcgttctgg atcgcgatcg ccgcctggga
     1141 cgcgaccacc tggatcaggg ccagccggtc gggggtgaag actccgctgg cgaggtcgtt
     1201 ctccaggtac accacgccga gcaggcggcc ctggtgcagc agcggcgtcg cgatgaccga
     1261 gcgggtggcg cgctccagga cgtacggatc gtggcggtag cggtcgtcgc cgcgcgcgtc
     1321 ggccaggacc aggctgtcgt gggtgcggcg cacgtggttg acgatgacca cggggaccgc
     1381 atcggtgccc gcgagcggag gcgcgtcgtg cacgtccacc gcgactcccg ctccagcgcc
     1441 gcgggcgtgc acccgcggcg ccccgtcgtg ctccaggacc agcgcccccc gctccgcgcc
     1501 cgcgttctcg atcgcgatgc cgagcagttt ctccagcagc gcctccagct cgatctcccc
     1561 cgccagcgca cgggccgcct tcacgacggt ggcgaggtcg aggctgtcgt ccccgctgcc
     1621 gagccagggc tcgccgtcct ccggcaccgc cgccgcggcc gggccgaacc gccggtcgag
     1681 gtcggccacc ttcgccagcg cgccccaccg catccacgcc cggcgcgccg cgccgagata
     1741 cacggccgcg acccgcggat gccggcgctc cagcccgaac cgcccgcaga gctcgttggc
     1801 gagcgccacc tgccggagga gcccggtgct ctccgcctgg gccaccgcgc gctcgtagag
     1861 gtccagcgcc gcgagcggcc gccccaccgc acgctcgatc tcggcggaga ggagcagcga
     1921 ctggcagagg aagttctccg ggcactgctc ggccagcgtc gccagcgagc ggcgcgccat
     1981 ctccagctcc gccaggctcg cgcgccgctc gccgtccgcg gcgctgccgt agccggccgc
     2041 gagcgccagg ccgtgccaga agtcgaactc caccggccag atggtgccgg cgaggtggga
     2101 gatgatggcc cggacgtcgc gcccggtctc cagcgccgcc gctgtctctc cgaacaggca
     2161 gcagagctgg agcctgagca ccccgtgaat cgcggcgaag aacggctgat cccgatagcg
     2221 cgcggcgtac tccgcctcgg cgagggtctc gtccgagagc gacagcggag tcagggtgcc
     2281 gccctggagc gcgcgtcccc agttgagcac cagccggagc gcgtcggcga agccctgcgc
     2341 cttcagcttc tcgagcagcg ccacgttggg gagctgctcg cggacgaagg cggcgaggtc
     2401 ctgggtacag tgcatggccg gccaggcctc ggtcgccgcg ccatagaccg catagaggaa
     2461 gtcgccgctc tcgagcccgc tccggcaggc ctcgcgcgcg tgcgggaggc acgtcgccat
     2521 cggccggcgc cagaggttca cgtgggcgtg gaactgctgg tggatcttcg cccggcggcg
     2581 ccggtcgtcg aatcgctcgt tcacctgcag cgcgagggtc ccgtactcgt aggccgccgc
     2641 gtaatcgccc cgtaccggtc cgaccgtgat ggcatgggtc acgtacccgt aggccgactc
     2701 ctccaggttg ccgtgggtga gcgaga
//
LOCUS       DASUYN010000299         5002 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1420698, whole genome shotgun sequence.
ACCESSION   DASUYN010000299 DASUYN010000000
VERSION     DASUYN010000299.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5002
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1420698"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            176..3349
                     /locus_tag="VF061_05935"
     CDS             176..3349
                     /locus_tag="VF061_05935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0042908 - xenobiotic transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit"
                     /protein_id="HEX6669076.1"
                     /translation="MNGARDQGERQLYFFVRRPVLAAVISIVIVLLGTFALLQLPVAR
                     YPQITPPSVQVTAIYPGATAEDVAQAVAAPIEQQLSGLDGLLYYRSSNSSSGVMNLQV
                     FFDIGRDQDIAAVDVQNAIKVAEPQLPEEVRRQGVVIRKAQTDILLVASLTSPDPRYD
                     ATFLANYAKLYVVDEIKRLNGVGDATVFGGLDFAMTIRLDPDRMAQLGLTVSDVRDAV
                     QEQNATNPAGTLGREPAPETTQLTLPVTTLGRLRTADQFGDVIVRARDDGSFVRVRDI
                     GTVELTSQNLDLVGRMNGQPTANFLIYLRPGANQLQVKEAFVERMNELARAFPPGVTW
                     MIPFDTTPFVTASIEEVVITLLEAMALVTLVVFLFLQSWRATLIPLLAVPVSVIGTFL
                     GLAALGYSVNLLTLFALVLAIGIVVDDAIVVIENVERIMDEEKVSARVAADKAMGQVG
                     GALVAIVLVLCSVFIPVAFLGGITGTMLRQFAVTLVIAVVLSGVVALTLTPALCALLL
                     KGTPHDTHNRFFRRFNGWFDRVTGGYVRRVGGVLGRPRAWLAAFGVILALAFVLYQRV
                     PSAFIPTEDKGFFVIAMQLPDGASRRRTDAVVERVEAILREEPAVRAFSGLVGFNLLA
                     QANQSNGATMFVLLEPWDERDADNSVDAILGRVNAQLFGMKDALAFGFNFPEIPGLGT
                     TAGLELNLQARAGQDVPTFARQVQAVLADMNQLPETPAAATTFRANVPQVFVHVDRET
                     AKARGVELDDLFATMQAMLSSLYINDFNLFGRTYRVQAEAQSRFRQTPEDIGRLYVRS
                     ADSEMIPLSALTRTEFRGAPSVLSRFNGFPSALVTSTAPPGVSSGQQLDAVERLLAGY
                     ADQGVGFAYSGQSFQERASSGEAGLVFALGLVLVFLVLAAQYESWSIPFAVILGIPFG
                     VLGAFLGVWLRGIPSDIYFQVGLITVVGLAAKNAILIVEFANELRARGASVRDAAMEA
                     ARERFRPILMTSFAFIFGVAPLMFASGAGAASRHSLGTGVFAGMLTATTVGIFFIPLF
                     FAVIRGLTERWGRRSGATVPAPVGEGA"
     gene            complement(3525..4922)
                     /locus_tag="VF061_05940"
     CDS             complement(3525..4922)
                     /locus_tag="VF061_05940"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX6669077.1"
                     /translation="MRALALALVLIVGLASGAARAQVREPDFAALGFEAAERLGQYIR
                     VRTVNPPGHETEGAKWLQQVLAEEGIAAEIFESSPGRGNLYARLPGNGTKRPLVLLSH
                     IDVVPVTDSAWTVRPWSGETRHGAVWGRGALDMKGTAIVELMAMIALKRRGVPLSRDV
                     ILVANADEETNSTGAEWFVREKKALLWNAEFLLNEGGHNRLNAAGRTEYYGIGVTEKV
                     PYWLRIIARGSPGHGSIPRPDNAAARIARALGRIAAWRAPVRLTAPAERYFKDLATRE
                     SDPLRRRWLADPAAALRDTAGLRFFTSNLYYDAILRNTLTITVLRGSDKTNVIPPEAS
                     AELDVRLLPGERPSDFVGQLRRVIADSLVEIVPLRPERQATASPLDGPMIEAIREAVQ
                     AMEPGALITTPMLAGYTDSYYYRALGIAAYGISPFRLSEEDSRTVHGNDERVTVENLR
                     FGVEFMYRIVERVAR"
BASE COUNT          691 a         1753 c         1764 g          794 t
ORIGIN      
        1 gggactggtg gatcgtggag cggggactcg gcgccggcga gcgggtcgtc gtggacgggg
       61 tacagaaggc ggcgccgggc cggccggtgc ggccggtggc gctggccgac agcgccgtgg
      121 gaaagactcc gacggcggac agtgtcgccg ccgacggtac gcagggaggc tcgcagtgaa
      181 cggagctcga gaccagggcg agaggcagct gtacttcttc gtccggcggc cggtgctggc
      241 cgccgtgatc tccatcgtca tcgtgctgct gggcacgttc gcgctcctcc agctgccggt
      301 ggcccgctat ccccagatca ccccgccgtc ggtgcaggtg accgccatct atcccggcgc
      361 caccgccgag gacgtggccc aggcggtggc cgcgccgatc gagcagcagc tctcggggct
      421 cgacggactc ctgtactatc gctcgtcgaa ctccagcagc ggggtgatga acctccaggt
      481 gttcttcgac atcggacggg accaggacat cgccgcggtg gacgtgcaga acgccatcaa
      541 ggtggccgag ccccagctcc cggaggaggt gcggcggcag ggcgtggtga tccggaaggc
      601 ccagaccgac atcctgctgg tggcctcgct caccagcccc gacccccgct acgacgccac
      661 cttcctcgcc aactacgcca agctgtacgt ggtggacgag atcaagcggc tgaacggggt
      721 gggcgacgcg accgtcttcg gcgggctcga cttcgccatg acgatccggc tcgatcccga
      781 ccgcatggcc cagctcggcc tcaccgtgag cgacgtgcgc gacgcggtgc aggagcagaa
      841 cgccaccaac cccgcgggca cgctgggccg cgagccggcg ccggagacca cccagctgac
      901 cctgccggtg accacgctgg gccgcctgcg gacggccgac cagttcggcg acgtgatcgt
      961 gcgggcccgg gacgacggct ccttcgtgcg ggtccgggac atcggcacgg tcgagctcac
     1021 ctctcagaac ctcgacctcg tcggacggat gaacggccag ccgacggcga acttcctgat
     1081 ctacctccgc cccggggcca accagctcca ggtgaaggag gcgttcgtcg agcggatgaa
     1141 cgagctggcc agggcgttcc cgccgggggt cacgtggatg atcccgttcg acaccacgcc
     1201 gttcgtcacc gcctcgatcg aggaggtggt gatcacgctg ctggaggcga tggcgctggt
     1261 gacgctggtc gtgttcctct tcctccagag ctggcgtgcc accttgattc ccctcctggc
     1321 ggtgccggtg agcgtgatcg ggaccttcct cggcctcgcc gccctggggt actcggtcaa
     1381 cctgctcacc ctcttcgcgc tggtgctcgc gatcggcatc gtggtggacg acgccatcgt
     1441 cgtgatcgag aacgtcgagc gcatcatgga cgaggagaag gtctcggccc gggtggccgc
     1501 ggacaaggcg atgggccagg tgggcggcgc cctggtggcg atcgtgctgg tgctctgctc
     1561 ggtgttcatc ccggtggcgt tcctcggcgg gatcaccggc accatgctgc ggcagttcgc
     1621 ggtgacgctg gtgatcgccg tggtgctctc cggggtggtg gcgctgacgc tgacgccggc
     1681 gctctgcgcg ctgctcctca agggcacccc gcacgacacc cacaaccggt tcttccgccg
     1741 gttcaacggc tggttcgatc gggtgaccgg cggctatgtc cggcgggtgg gcggcgtgct
     1801 gggccgtccc cgcgcctggc tcgcggcctt cggcgtgatc ctggctctgg ccttcgtgct
     1861 ctaccagcgg gtccccagcg ccttcatccc caccgaggac aagggcttct tcgtcatcgc
     1921 catgcagctc ccggacggcg cgtcgcggcg ccgcaccgac gcggtggtcg agcgggtgga
     1981 ggccattctc cgcgaggagc ccgcggtgcg ggccttctcc ggcctggtcg gcttcaacct
     2041 gctggcgcag gccaaccagt ccaacggcgc caccatgttc gtcctgctcg agccgtggga
     2101 cgagcgcgac gccgacaaca gcgtggacgc gatcctcggc cgggtgaacg cccagctctt
     2161 cgggatgaag gatgcgctcg ccttcggctt caacttcccc gagatccccg gcctgggcac
     2221 cacggcgggt ctggagctca acctccaggc gcgagccggc caggacgtgc ccaccttcgc
     2281 ccgtcaggtc caggcggtgc tggccgacat gaaccagctg cccgagacgc ccgcggcggc
     2341 gacgaccttc cgggccaacg tcccccaggt gttcgtgcac gtggaccggg agaccgccaa
     2401 ggcgcgcggc gtggagctgg acgacctctt cgccaccatg caggccatgc tctcgtcgct
     2461 ctacatcaac gacttcaacc tgttcggacg gacctatcgg gtgcaggcgg aggcgcagtc
     2521 gcgcttccga cagacgccgg aggacatcgg gcggctctac gtccggtcgg ccgactcgga
     2581 gatgatcccg ctgtcggcgc tcacccgcac cgagttccgc ggcgcgccca gcgtgctgag
     2641 ccgattcaac ggcttcccct cggcgctggt cacgtccacc gcgccgccgg gtgtcagctc
     2701 cggccagcag ctcgacgcgg tggagcgcct gctggcgggg tacgcggacc agggcgtcgg
     2761 cttcgcctac agcggccagt cgttccagga gcgggcctcg agcggggaag ccggtctggt
     2821 cttcgccctg gggctggtgc tggtgttcct ggtgctcgcg gcccagtacg agagctggtc
     2881 cattccgttc gcggtgatcc tgggcatccc gttcggcgtg ctgggagcat ttctcggcgt
     2941 ctggctccgc gggatcccga gcgacatcta cttccaggtg ggtctcatca ccgtcgtggg
     3001 tctcgcggcg aagaacgcga tcctgatcgt ggaattcgcc aacgagctcc gcgcccgggg
     3061 ggcgagcgtg cgcgacgccg ccatggaggc ggcgcgggag cggttccggc ccatcctgat
     3121 gacgtcgttc gcgttcattt tcggcgtggc gccgctgatg ttcgccagcg gcgcgggcgc
     3181 cgccagccgg cactcgctcg gcaccggcgt gttcgccggg atgctcaccg cgaccacggt
     3241 cggcatcttc ttcatcccgc tcttctttgc cgtgattcgc gggctcaccg agcggtgggg
     3301 ccgccggtcc ggcgcgacgg tgccggcgcc ggtgggggag ggagcgtgag gcgggtccgg
     3361 ccggtggcgg cgctgctgga gccgcgctcg gtggtggggt agtatcgggc gttgggggga
     3421 gccgggaggt ggagtgagat gatgtgtcac cctgaacgaa gtgaaggggg ccatgctcgg
     3481 gatggccccc ttcgctgcgc tcagggtgac acaggatggg ggcgctaccg cgctacccgc
     3541 tccacgatcc gatacatgaa ctcgaccccg aaccgcagat tctcgaccgt cacccgctcg
     3601 tcgttgccgt gcaccgttcg ggagtcctcc tccgagagcc ggaacggact gatcccgtag
     3661 gcggcgatgc cgagcgcgcg gtagtagtag ctgtcggtgt agcccgccag catcggcgtg
     3721 gtgatcagcg ccccgggctc catcgcctgc accgcctccc ggatcgcctc gatcatcggg
     3781 ccgtcgagcg gcgacgcggt ggcctgccgc tcggggcgca ggggcacgat ctcgaccagg
     3841 gagtccgcga tcacccggcg cagctggccc acgaaatcgg acgggcgctc cccggggagc
     3901 agccgcacat cgagctcggc gctcgcttcg ggcgggatca cattggtctt gtccgagccc
     3961 cggagcaccg tgatggtcag cgtattccgc aggatggcgt cgtagtagag gttggaggtg
     4021 aagaaccgga ggcccgccgt atcccggagc gcggcggccg gatcggcgag ccagcgccgc
     4081 cggagcgggt ccgactcgcg ggtggccagg tccttgaagt agcgctcggc gggcgccgtg
     4141 agcctgacgg gagcgcgcca cgcggcgatc cggcccaacg cacgcgcgat ccgcgccgcc
     4201 gcgttgtcgg ggcgcgggat ggagccgtgc cccggcgacc cccgggcgat gatccggagc
     4261 cagtagggca ccttctcggt cacaccgatg ccgtagtact cggtccgccc cgccgcattg
     4321 aggcggttgt ggccgccctc gttcagcagg aactccgcgt tccatagcag ggccttcttc
     4381 tcccggacga accactccgc gccggtggag ttggtctcct cgtcggcgtt cgccaccagg
     4441 atcacgtcgc gtgagagcgg cacgccccgg cgcttgagcg cgatcatcgc catcagctcg
     4501 acgatcgccg ttcccttcat gtcgagtgcg ccgcgacccc acaccgcgcc gtgcctcgtc
     4561 tcccccgacc agggcctcac cgtccaggcg gagtcggtca cggggaccac gtcgatgtgg
     4621 ctcagcagga cgagggggcg cttcgttccg ttgccgggca gccgggcata cagatttccc
     4681 cgccccggcg acgactcgaa gatctccgcc gcgatcccct cctccgccag cacctgctgc
     4741 agccacttcg ccccttcggt ctcgtgcccg ggcggattca ccgtccgcac ccggatgtac
     4801 tgccccagcc gctccgcggc ctcgaagccg agggcagcga agtccggctc gcggacctgg
     4861 gcccgggcgg cgccggaagc gaggccgacg atcaggacga gggcgagggc gagcgccctc
     4921 actccgtctc ccgcgcccac ttgaagaaca gcaccccgat cgccaggaac atccacaggt
     4981 tgcccggcac ccacatcagc ag
//
LOCUS       DASUYN010000300         3981 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_540329, whole genome shotgun sequence.
ACCESSION   DASUYN010000300 DASUYN010000000
VERSION     DASUYN010000300.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3981)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3981)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3981
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_540329"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..601)
                     /locus_tag="VF061_05945"
     CDS             complement(<1..601)
                     /locus_tag="VF061_05945"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: protein motif:HMM:NF015753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpA"
                     /protein_id="HEX6669078.1"
                     /translation="MTANGWLQIALFALAVVVVTKPLGLYLVAVYGGGVRWLAPLERA
                     LYRLAGVDPGEDQHWTRYAGAVLLFSAASMLLTYAALRLQHVLPFNPQGLPAVPDRQA
                     FETAASFTTNTNWQSYSGEATMSYFSQMTQLAFHNFVSAATGMALAVALVRGIARRSA
                     GRLGNFWADLVRGTVYVLLPVCVVLALLLVQQGVIQNFDP"
     gene            complement(603..692)
                     /gene="kdpF"
                     /locus_tag="VF061_05950"
     CDS             complement(603..692)
                     /gene="kdpF"
                     /locus_tag="VF061_05950"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR02115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031004 - potassium ion-transporting
                     ATPase complex [Evidence IEA];
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit F"
                     /protein_id="HEX6669079.1"
                     /translation="MDAESLTAGVVALALLAYLLYSLLMPERF"
     gene            990..3350
                     /locus_tag="VF061_05955"
     CDS             990..3350
                     /locus_tag="VF061_05955"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family aminopeptidase"
                     /protein_id="HEX6669080.1"
                     /translation="MSLRGWIGTPIVAFQLLVLPPSSNPLSAQLATAGPREPSAIEPG
                     ARTYDGLFDELVRLQPRADRAAEVTNLVLQREVGRFTLQTGRLYLLTPVGGRTVGAVF
                     RGTGVFSFAPGDRVERDRLRRLEKADSLESPFTQLLLLFADGTLEELEAALEFGPDDQ
                     VGEMRGAIEPALEFLVDKDSRTADPDFMSAFLNEEKSELFFAHVRRKGRDPITFLVNP
                     NEFEGVRLQSRITRRGYDRHAEVITQFPLTGRRRDGLVQSERLRQAAVEHYAIDVSLP
                     PTGIGEIGFSAAATIRIVADTAVGPWVAFELFEKLKVDSASWESGEPATVARGKDSPL
                     LWVKLDRRIGPGDSRTLRLHYHGDLIDRYVDFFRIKSSVAWYPRSLEGRSLATFDLTF
                     STGFKYLLASVGDKVDSSRADRTVRSRWVTPSPIRNASFNLGLFEGYDVREKDAPPVT
                     VMISEEAHKKLAKSFAQQSRMRERVGADVAKSLRFFQEMYGPPPVRRFYATEIPDFHG
                     EAFPGMVHLSWTTFQNTSYDGDDEVFRAHEVAHQWWGIGVDFASYHDQWLSEGFATFS
                     GLWYLQNVRGSNDQYFELLRRWKSSILLRGTEPGPIWLGYRVFATRDDDLDDYQTIIY
                     QKGAWVVHMLRILTLDLKTMSDARFTAIMQDFYRRYEGRRASTEDFRKVVERHTGADM
                     GWFFDQFVYGAEIPTYRVAHRTEKSADGQYRVKLRVRQEGVPEGFRMYVPVTLDLGKK
                     RVARFRVKVEGPVTELELPPVPAEPKKVTFNDLEGILAEVKTTGWE"
     gene            3382..3756
                     /locus_tag="VF061_05960"
     CDS             3382..3756
                     /locus_tag="VF061_05960"
                     /inference="COORDINATES: protein motif:HMM:NF014376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX6669081.1"
                     /translation="MYRVRQEDLPFQGSSHQFVGADNGGVGISAFLLSAAPGFGPGPH
                     RHPYDEVQFLREGRGLYVVDGQEFEAGAGDILVIKAGEVHSFRCIGDVPLVQVDVHLG
                     PRFVQENLLVGDNPQPGPGNGQ"
     gene            3760..>3981
                     /locus_tag="VF061_05965"
     CDS             3760..>3981
                     /locus_tag="VF061_05965"
                     /inference="COORDINATES: protein motif:HMM:NF015338.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HEX6669082.1"
                     /translation="MLRVATWNVNGIRARAAQVHEWLERERPDVVCLQELKAELSQVP
                     EVVQRQDYHAFWHCCKGYSGVSLQVRRDTF"
BASE COUNT          667 a         1324 c         1394 g          596 t
ORIGIN      
        1 aggggtcgaa gttctggatc acgccctgct ggaccagcag cagcgcgagc acgacgcaaa
       61 ctggcaggag cacgtacacc gtcccgcgca ccaggtccgc ccagaagttg ccgagccggc
      121 cggcggaccg gcgcgcgatg ccccgcacca gggccaccgc gagcgccatc ccggtcgccg
      181 ccgacacgaa attgtgaaag gcgagctggg tcatctggga gaagtacgac atggtcgctt
      241 cgcccgagta cgactgccag ttcgtgttcg tggtgaagga ggccgccgtt tcgaacgcct
      301 ggcggtcggg cacggccggg agcccctggg gattgaacgg cagcacatgt tggagccgca
      361 gggccgcgta ggtgagcagc atggacgccg cgctgaagag gagcacggcg cccgcatacc
      421 gggtccagtg ctggtcttca ccggggtcca cccccgcgag tcggtacagt gctcgttcca
      481 ggggcgcgag ccagcgcacc ccgccgccgt acacggccac caggtagagg ccgagcggct
      541 tcgtcacgac gacgacggcg agcgcgaaga gggcgatctg aagccagccg ttggcggtca
      601 tgtcagaagc gctccggcat gagcagggag tagagcaggt aggccaggag cgcgagcgcg
      661 acgacgcccg cggtcaggga ctcggcgtcc acgtcagcgc tccgtgtcgg cgcggcgacc
      721 cagtcgctcg caaccgcgaa cgtaggccag catcgcggca aagaaggcca gcgtgcccgc
      781 gaggtagagg aggtcgatgg gcatgctccg aacttagggg cgggaacatc agggaggggt
      841 acgggtctgg ccgccaagca tcaggattcc gtcaagaaga ggcagacggc ggggcgccgg
      901 tgcaggatcg ttcagcttga ccgcctccgg gagctttcgc atcttgccgg caccccctgc
      961 caccacctgt cccgtcgctc ggaggcgtgg tgtcgcttcg cggatggatc ggcacgccga
     1021 tcgtcgcgtt ccagctgctc gtcctgcccc ccagctcgaa ccccctttcc gcccagctcg
     1081 cgaccgccgg accgcgggag ccgtccgcca tcgagccggg cgcgcggacc tacgacgggc
     1141 tgttcgacga gctggtgcgc ctgcagccgc gggccgaccg ggcggcggaa gtcaccaatc
     1201 tcgttctcca gcgcgaggtg ggacgcttca cgctccagac cggccggctg tacctgctca
     1261 ccccggtcgg cggccgcacg gtcggcgcgg tcttcagggg cacgggcgtc ttctcgttcg
     1321 cgcccgggga cagggtcgag cgcgatcggc tccggcggct ggagaaggcc gactcgctcg
     1381 agtcgccctt cacccagctc ctgctgctct tcgccgatgg aaccctggag gagctggagg
     1441 cggcgctcga gttcgggccc gacgaccagg tgggcgagat gcgcggcgcc atcgagccgg
     1501 ccctcgagtt cctggtggac aaggacagcc gcaccgccga tcccgacttc atgagcgcgt
     1561 tcctgaacga ggagaagagc gagctgttct tcgcccacgt gaggcggaag gggcgcgatc
     1621 cgatcacttt tcttgtcaac cccaacgagt tcgagggcgt gcggctgcag agccggatca
     1681 cccggcgggg ctacgaccgg cacgcggagg tgatcaccca gttccccctg accggccgcc
     1741 ggcgcgacgg gttggtccag agcgagcgcc tccgccaggc cgcggtggag cactacgcca
     1801 tcgacgtgtc gctcccaccc accggcatcg gcgagatcgg cttctccgcc gctgcgacga
     1861 tacggatcgt cgcggacacc gccgtgggcc cctgggtcgc cttcgagctg ttcgagaagc
     1921 tgaaagtgga ctcggcgagc tgggagagcg gggagccggc cacggtcgcg cggggcaagg
     1981 acagcccgct gttgtgggtg aagctcgacc gccggatcgg cccgggcgac agtcggaccc
     2041 tgaggctcca ctatcacggc gatctcatcg accggtacgt ggacttcttc cggatcaagt
     2101 cctccgtcgc ctggtatccc cgatcgctcg agggccgcag cctggccacg ttcgatctca
     2161 ccttcagcac cggcttcaag tacctgctcg ccagcgtggg cgacaaggtg gactcctccc
     2221 gggccgaccg caccgtgcgg agccgctggg tcacaccgtc gccgattcgg aacgcgtcgt
     2281 tcaacctggg gctcttcgag gggtacgacg tccgggaaaa ggacgcacct ccggtgacgg
     2341 tgatgatctc ggaggaggcc cacaagaagc tggcgaagtc gttcgcgcag cagagcagga
     2401 tgcgggagcg ggtgggcgcc gacgtggcta agagcctccg gttcttccag gagatgtacg
     2461 gcccgccgcc ggtccgccgg ttctacgcta cggagatccc cgacttccac ggcgaggcct
     2521 tccccggcat ggtccacctc tcctggacca ccttccagaa caccagctac gacggcgacg
     2581 acgaggtctt ccgcgcccac gaggtggccc accagtggtg gggcatcgga gtggacttcg
     2641 ccagctacca cgaccagtgg ctcagcgagg gcttcgcgac cttctccggc ctctggtacc
     2701 tccagaacgt gcggggaagc aacgaccagt acttcgagct gctccgccgc tggaagtcga
     2761 gcatcctgct gcgcggcacc gagccgggtc cgatctggct cggctaccgg gtgttcgcca
     2821 cccgggatga cgacctcgac gactaccaga cgatcatcta ccagaagggc gcctgggtcg
     2881 tgcacatgct ccggatcctg acactcgacc tcaagaccat gagcgacgct cggttcacgg
     2941 ccatcatgca ggacttctac cgcaggtacg aaggccgccg ggccagcacc gaggacttcc
     3001 ggaaggtcgt cgagcggcac accggcgcgg atatgggctg gttcttcgat cagttcgtgt
     3061 acggcgcgga gatccccacg taccgggtcg cgcaccgcac cgagaagtcg gccgatgggc
     3121 agtaccgggt gaagctccgc gtccggcagg agggcgtgcc ggagggcttc cggatgtacg
     3181 tgccggtgac gctggacctg ggaaagaagc gggtggcacg gttccgggtg aaggtggagg
     3241 ggccggtgac ggagctggag ttgccgcccg tgccggcgga gccgaagaag gtgaccttca
     3301 acgatctcga ggggatactg gcggaagtga agacgacggg atgggagtga ggcgcgacga
     3361 gaaccgaggg agacgacagc gatgtaccga gtccggcaag aggacctgcc cttccagggc
     3421 agctcccacc agttcgtcgg cgccgacaac ggcggcgtcg gcatctccgc gtttctgctg
     3481 agcgctgccc ccggcttcgg tcctggcccc caccgccacc cctacgacga ggtccagttc
     3541 cttcgggagg gtcggggcct ctacgtggtg gatggccagg agttcgaggc gggcgcgggg
     3601 gacatcctgg tcatcaaggc cggggaagtc cacagcttcc gctgcatcgg cgacgtgccg
     3661 ctggtgcagg tggatgtgca tctcggcccg cgcttcgttc aggagaacct gctcgtaggc
     3721 gacaaccctc agccgggccc gggcaacggg cagtagccga tgctcagggt cgccacctgg
     3781 aatgtgaacg gcatccgcgc ccgcgccgcc caggttcacg agtggctgga gcgcgagcgc
     3841 cccgacgtgg tctgcctcca ggagctcaag gccgaactgt cgcaggtccc ggaagtggtc
     3901 cagcgccagg attaccacgc cttctggcac tgctgcaagg gctactccgg cgtttccctg
     3961 caggttcgcc gggacacctt c
//
LOCUS       DASUYN010000301         2078 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_760307, whole genome shotgun sequence.
ACCESSION   DASUYN010000301 DASUYN010000000
VERSION     DASUYN010000301.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2078)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2078)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2078
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_760307"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..889)
                     /locus_tag="VF061_05970"
     CDS             complement(<1..889)
                     /locus_tag="VF061_05970"
                     /inference="COORDINATES: protein motif:HMM:NF025013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4142 domain-containing protein"
                     /protein_id="HEX6669083.1"
                     /translation="MPITGVFAAAMLAAAPAALAQVPNRDTARSPWDLPPSPGSAGGT
                     GAASADTAFIRQAIRGNFTEVALGRLAEDRAEKSDVEDFAERMVSDHNSMNQDWADLA
                     RDQNMRVGLEFGPAGEQAIERLKDLEGAEFDQAYMSEMIRHHEQDLAAFQRMASSARS
                     SEVRQLASSGASTIREHLALAREVGSRVGIASTAGRAGGVTTPVPAPRDDSARRTTVA
                     RTDREERDPRNDRDRRTPLRAADRTFVEGVLSDHLMHVRLAKRAKREARSEATRELAE
                     RMEKDFEKWAERWESFADRR"
     gene            complement(1075..1692)
                     /locus_tag="VF061_05975"
     CDS             complement(1075..1692)
                     /locus_tag="VF061_05975"
                     /inference="COORDINATES: protein motif:HMM:TIGR02241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEX6669084.1"
                     /translation="MSTPLHSLTADLLAVVRRHEPAWTGSNDSDPGVTLLEIGAWIGD
                     RLFSSGSMSVPQVVSGIAARPDPYRDFKFRVTWDGGAVAGVTRISALRRTADIVEHRD
                     GSAPHLVHRVPGRQVCEPFTLERPLGPDTRFEDWADQLRGQTAGTAWRKNVRIEILDH
                     AGRLFLAYDVIGCWPTAYRVLPDLTEALTLVPEGWQRDRSVRPVA"
BASE COUNT          292 a          725 c          736 g          325 t
ORIGIN      
        1 cgcgccggtc cgcgaagctc tcccagcgct ccgcccactt ctcgaagtcc ttctccatcc
       61 gctccgccag ctcgcgggtc gcctcgctcc gcgcctcgcg cttggcccgc ttggccaggc
      121 ggacgtgcat gagatggtcg ctcaggaccc cctcgacgaa ggtgcggtcc gccgcccgaa
      181 gcggggtgcg gcggtcccgg tcgttcctgg ggtcgcgctc ctcgcggtcg gtgcgggcca
      241 ccgtggtgcg ccgcgcggaa tcgtcgcggg gcgccggcac cggggtcgtc acgccgccgg
      301 cgcggcccgc cgtgctggcg atgccgacgc ggctgccgac ctcgcgcgcg agcgccaggt
      361 gctcgcggat ggtcgaggcc ccactgctcg cgagctgccg gacctcggac gagcgggccg
      421 acgacgccat gcgctggaag gcggccaggt cctgctcgtg gtgccggatc atttcggaca
      481 tgtaggcctg gtcgaactcg gcgccctcca ggtctttgag ccgctcgatc gcctgctccc
      541 ctgcgggacc gaactccaaa cccacccgca tgttttggtc cctggcgagg tcggcccagt
      601 cctgattcat ggaattgtgg tccgagacca tgcgctcggc gaaatcctcg acgtccgact
      661 tctcggcgcg atcctccgcc agccggccca gcgccacctc ggtgaagttg ccgcggatgg
      721 cctgccggat gaacgcggtg tcggccgacg cggcgcccgt gccgccggcg gagccggggc
      781 tgggcgggag gtcccacggc gacctggccg tgtcccggtt gggcacctgt gccagcgcgg
      841 ctggcgccgc ggccagcatc gctgccgcaa acacgcctgt gatgggcatc actctcgaca
      901 tatgacttcc cccttcatcg aaggcttggc gatcctggag ggatccaggg atcgaaaatc
      961 gagaccctgc tggtgcacca tccgtgcccg cgggttccct cagatcctag gggattcccc
     1021 gcgacgcgga ggtgatctcc agcacgatga agggaggagt gtcctcgatg tggctcaggc
     1081 gaccggccgt acgctccggt cgcgctgcca tccctccggc acgagggtga gggcctcggt
     1141 gagatcgggc aggacccgat aggcggtagg ccagcagccg atcacgtcgt aagcgagaaa
     1201 cagccgcccg gcgtggtcca ggatctcgat ccggacgttc ttccgccagg ctgtcccggc
     1261 cgtttgccca cgaagctggt cggcccagtc ctcgaaccgg gtgtccgggc cgaggggtcg
     1321 ctccagggtg aacggctcgc agacctggcg gccgggcacg cggtggacga gatgcggcgc
     1381 gctgccgtcc cgatgctcga cgatatccgc ggtgcgacgc agggcggaga tccgggtgac
     1441 gccggcgacg gcgcccccgt cccacgtcac ccggaacttg aagtcgcgat agggatcggg
     1501 ccgggccgcg atccccgaca cgacctgagg gacgctcatg cttccggagg agaagagtcg
     1561 atcgccgatc cacgcgccga tctccagcag cgtcaccccc ggatcggagt cgttcgagcc
     1621 ggtccacgcc ggctcgtggc ggcggacgac ggccagcagg tcggcggtga ggctgtgcaa
     1681 gggtgtgctc atggaaggct cggatgtggt cggggacgct tacgagtgtc gcgtgccctg
     1741 gaagaatagg tgcgacacgg atgcgagggc gagagggcga cgtgggcccc cgttgtcacc
     1801 ctgagcgcag cgaagggggc catatcgagc atggccccct tcactgcgtt cagggtgaca
     1861 caagcagcgt cccccggtgc gagacggacg ctggcagcgg ctggaggagc gctccgccta
     1921 gatcgtctcc gcttcgtccc gcttggacgc cgcgccgtcg agcacttccc gcaccttgcg
     1981 cgcgagctcc cggggagtgc agggcttctg caggaatggc cgcccctgct ccagcagccc
     2041 gcgtccgatc acgtcctcgt ccacatacgc ggaggtgt
//
LOCUS       DASUYN010000302         3369 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1204234, whole genome shotgun sequence.
ACCESSION   DASUYN010000302 DASUYN010000000
VERSION     DASUYN010000302.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3369)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3369)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3369
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1204234"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>3369
                     /gene="gltB"
                     /locus_tag="VF061_05980"
     CDS             <1..>3369
                     /gene="gltB"
                     /locus_tag="VF061_05980"
                     /EC_number="1.4.1.13"
                     /inference="COORDINATES: protein motif:HMM:NF008730.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0006537 - glutamate biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glutamate synthase large subunit"
                     /protein_id="HEX6669085.1"
                     /translation="TLPSWPLAQPFRLLAHNGEINTLWGNRNAMTMRQPMLSSPVWGA
                     KIERLREVIWREGSDSASLDNAMELLVRSGRDPVHSAMMMVPQAWEKYPDLDPSIKAF
                     YEYHQCVLEPWDGPAAIAFTDGVLAAAAVDRNGLRPCRYKVRRDGLVVCGSEVGVVDL
                     DPREVVECGKVGPGEVLVVDTARHEVIRNLDAKREIAGRRPYARWVARYMATLVPDPA
                     RVSPSPEGEALVRLERAFGYGAEDLRLVLEPMGTTGGDPVWSMGDDTPIPPLSAVPQS
                     VYAYFRQRFAQVTNPPIDPLREAMVMSLRMHLGRRGSPLLERPSYARMLRLEHPILLD
                     EEMAALRNVAGFSTVTLDAVWDVSKGVEGLRPALTALRRAAERAARRGARVIVISDRT
                     ADERHAPIPMLLAIGAVRQHLVHTGLRARVGLVAEAGDALDIHHFATLIGYGAEAVHP
                     WLALAAVREAFAVKDGHRPSRKEPAEPRPGSGEAAGRFRSGAEKGLLKILSKMGISTL
                     SSYCGGQIFEILGLGHEVVATCFDGTASPIGGIGFEEIGEDVLARHRAAFAAADAPAA
                     TLPDHGRVRFRKDGEDHGWAPPIVVALQQAVKSEGGDAYRGFLARNSSRRPAGPRDLL
                     TMREGTPVPLEEVEPVEEIRRRFVSSAMSLGALSPEAHATLSIAMNRMGARSNSGEGG
                     EDPHNYLPAENGDRADNRIKQVASARFGVTTEYLTRAEELEIKIVQGAKPGEGGQLPA
                     HKVTDLIARLRHSVPGIQLISPPPHHDIYSIEDLAQLIHDLKTVNPRARVGVKLVSEA
                     GVGTVAAGVAKAYADYVLIAGHNGGTGASPLSSIKHAGSPWELGLAEAQHILIRNGLR
                     HRIEVRTDGGFKTGRDVVIAALLGAESYGFGTAPLVAMGCAMARQCHINTCPTGIATQ
                     REDLRGKFKGTPEQVIGYFTLVAEEVRRILAGMGFRSLDEIIGRNDLLERVEHPEVPR
                     AQMLDLSVLMAPAEPSSRPGQAATALRRTVERNERPGLVSLDGEILEELEPYLESGLP
                     FSGTYPIYNHHLTVGARVAGAIVTRTGDAGLPPGSVRLRFTGSAGQSFGAFTCRGMHL
                     ELEGEANDYVGKGLSGGEITIRPFRRAAYGDVSH"
BASE COUNT          490 a         1150 c         1275 g          454 t
ORIGIN      
        1 acaccctgcc gagctggccc ctggcccagc ccttccggct gctggcgcac aacggcgaga
       61 tcaacacgct ctggggcaac cgcaatgcga tgacgatgcg gcagccgatg ctgtccagtc
      121 cggtgtgggg cgcgaagatc gagcgcctcc gcgaagtgat ctggcgggag ggcagcgact
      181 ccgcgagcct cgacaacgcc atggaattgc tggtccgctc aggccgcgat ccggtccaca
      241 gcgcgatgat gatggtgccg caggcgtggg agaaataccc ggacctcgat ccgtccatca
      301 aggcctttta cgagtatcac cagtgcgtgc tggagccgtg ggacggaccg gcggcgatcg
      361 cgttcaccga cggcgtgctc gcggccgcgg cggtggaccg caacggcctc cggccctgcc
      421 gctacaaggt caggcgcgac gggctggtcg tgtgcggctc cgaggtgggc gtggtggacc
      481 tcgacccgcg cgaggtggtg gagtgcggca aggtggggcc cggcgaggtg ctggtggtgg
      541 acacggcgcg acacgaggtg atccggaatc tcgacgcgaa gcgggagatc gccggccggc
      601 gaccgtacgc ccgctgggtc gcgcgctaca tggcgaccct ggtgcccgac ccggcccggg
      661 tgtcgccctc gcccgagggc gaggcgctcg tgcgcctgga gcgggccttc ggctacggcg
      721 cggaggacct ccgcctggtg ctggagccga tgggcaccac cggcggcgat ccggtctgga
      781 gcatgggcga cgacacgccc atcccgccgc tctccgcggt gccgcagagc gtgtatgcct
      841 acttccgtca gcggttcgcg caggtgacca atccgccgat cgacccgctg cgcgaagcca
      901 tggtgatgtc cctccgcatg cacctcggcc ggcgggggtc gccgctgctg gagcggccgt
      961 cgtacgcccg gatgctccgg ctggagcacc cgatcctgct ggacgaagag atggcggcgt
     1021 tgcggaacgt ggcggggttc tcgaccgtca ccctcgacgc ggtgtgggac gtgtccaagg
     1081 gcgtcgaggg tctccggccg gcgctcaccg cgctccgccg ggcggccgag cgggcggcgc
     1141 ggcgcggcgc gcgcgtcatc gtcatcagcg accgcaccgc ggacgagcgc cacgcgccca
     1201 tcccgatgct gctcgcgatc ggtgcggtgc ggcagcacct ggtccacacc ggtctccgcg
     1261 cccgcgtcgg cctggtggcc gaggccggtg acgcgctcga catccaccac ttcgcgacgc
     1321 tcatcggcta cggcgcggag gcggtgcacc cgtggctggc gctcgcggcc gtccgggagg
     1381 ccttcgccgt gaaagacggc caccgcccga gcagaaagga gccggccgag ccgcggcccg
     1441 ggtcgggcga agcggccggg cggttccgct cgggagccga gaagggactg ctgaagatcc
     1501 tgtcgaagat gggcatctcg accctgtcct cgtactgcgg cgggcagatc ttcgagatcc
     1561 tcggcctggg ccacgaggtc gtcgcgacct gcttcgacgg cacggcgtcg cccatcggcg
     1621 ggatcggctt cgaggaaatc ggggaggacg tcctcgcgcg gcaccgggcg gcgttcgcgg
     1681 cggccgacgc accggcggcg accctgccgg accacggccg ggtgcgcttc cggaaggacg
     1741 gcgaggacca cggctgggcg ccgccgatcg tggtcgcgct ccagcaggcg gtgaagagcg
     1801 agggcggcga cgcctaccgc ggattcctgg ccaggaactc cagccgccgg cccgccggcc
     1861 cgcgtgacct gctcaccatg cgggaaggca cccctgtgcc gctggaggaa gtggagccgg
     1921 tggaggagat ccggcggcgt ttcgtctcct cggccatgtc gctgggtgcg ctgtcgcccg
     1981 aggcgcacgc gacgctctcc atcgcgatga accggatggg tgcccggtcc aactcgggcg
     2041 agggcggcga ggacccccac aactatctcc cggccgagaa cggcgaccgg gcggacaacc
     2101 ggatcaagca ggtggcgtcg gcgcgcttcg gcgtgaccac cgaatacctg acccgggccg
     2161 aggagctgga gatcaagatc gtgcagggcg cgaagcccgg cgaggggggc cagctcccgg
     2221 cgcacaaggt gacggacctg atcgcgcggc tccggcactc ggtgcccggc atccaactca
     2281 tctcgccgcc gccgcaccat gacatctact cgatcgagga cctggcgcag ctcatccacg
     2341 acctgaagac cgtgaaccca cgggcgcggg tgggcgtgaa gctcgtgtcg gaggccggcg
     2401 tgggcacggt ggccgccggc gtggcgaagg cgtacgcgga ctacgtcctg atcgccgggc
     2461 acaacggcgg caccggggcc tcgccgctgt cctcgatcaa gcacgcggga tcgccctggg
     2521 agctgggact ggcggaggcg cagcacatcc tgatccggaa cgggctccgg caccgcatcg
     2581 aggtgcggac cgacggtgga ttcaagaccg gccgggacgt ggtgatcgcc gcgctgctcg
     2641 gtgccgagag ctacggcttc ggcaccgccc cgctggtggc gatgggctgc gcgatggccc
     2701 gtcagtgcca tatcaacacc tgcccgaccg ggatcgcgac ccagcgggag gacctgcgcg
     2761 gcaagttcaa gggaacgccg gagcaggtga tcggctactt caccctggtg gccgaggagg
     2821 tgcggcgaat cctggccggc atgggcttcc ggtcgctgga cgagatcatc gggcggaacg
     2881 acctgctgga gcgggtggag cacccggagg tgccgcgggc gcagatgctg gacctctccg
     2941 tgctcatggc accggccgag ccctcgtccc gtccggggca ggccgccacc gcgctccgcc
     3001 gcacggtgga gcggaacgag cggcccgggc tcgtgtcgct cgacggggag atcctggagg
     3061 agctggagcc ctacctcgag agcgggctgc ccttctcggg gacctatccg atctacaacc
     3121 accacctcac ggtgggcgcg cgggtggccg gagcgatcgt gacgcggacc ggggatgcgg
     3181 ggctgccgcc gggctcggtg cgcctccggt tcaccggctc ggcggggcag agcttcggcg
     3241 ccttcacctg ccggggcatg cacctcgagc tggagggcga ggccaacgac tacgtgggca
     3301 agggcctgag cgggggcgag atcacgatcc ggccattccg ccgggcggcg tatggcgacg
     3361 tgtcgcatc
//
LOCUS       DASUYN010000303         2982 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1644121, whole genome shotgun sequence.
ACCESSION   DASUYN010000303 DASUYN010000000
VERSION     DASUYN010000303.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2982)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2982)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2982
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1644121"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1897
                     /locus_tag="VF061_05985"
     CDS             <1..1897
                     /locus_tag="VF061_05985"
                     /inference="COORDINATES: protein motif:HMM:TIGR01783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_function: GO:0015343 - siderophore-iron transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HEX6669086.1"
                     /translation="VTVVGRSVISDQRMQGMADVVRYIPGVTMGQGEGNRDQATIRGN
                     NTTSGFFVDGMRDDVQYFRDLYNVERVEALKGPNALIFGRGTGGGVINRVAKEAGWTP
                     VRELTLQGGSYDTRRGAVDVGQGVSDAVALRLNGMYENSHRFRHDVNLERYGFNPAVT
                     VAAGPRTRITADYEHFSDYRTADRGIPSFQGRPVGTDIRTFFGDPSRSWSDAVINVGT
                     AAVDHELSSALQIRSRVLAGHYDKMYQNVFPGSVDATGTQVSISAYNSINDRTNLLSQ
                     TDLVWRTSTGSVNHTLLAGVELGRQVSRNLRNTGFFDGSETSLSVPLDRPTISRPISF
                     RPGETDADNRVRVHSAGVYLQDQMNLTPYLQLIAGARIERFDLTFHNFRNGEDLERSD
                     DLLSPRAGVVVKPVEPLSLYGSYGVSYLPSSGDQFASLTATTETLEPEKFENFEVGAK
                     LDVAAGLSLTGAAYRLDRSNTSAPDPVDPSRTVQTGSQRTRGIEVGAAGSLTPAWQVA
                     AAYALQDAEITSRTAQAEPGATVPVVPEHTLSLWNRYQLHRLWGVGFGVVYQDDMFAS
                     IDNTVTLPSFTRFDAGVFFTLNGHLRGQINVENLFDEEYFVTSHSNNNISPGSPRAVR
                     ASVTAGF"
     gene            1953..>2982
                     /locus_tag="VF061_05990"
     CDS             1953..>2982
                     /locus_tag="VF061_05990"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX6669087.1"
                     /translation="MDLTTGVPFWLVRDGLTATYPKLDQDRRCDVAIIGGGITGAMLG
                     QRFAEEGLHTVLLEGREMGYGSTGSSTALLQYELDTHLVDLAGRLGPAAAQRSYRLAV
                     EAVEGIGRLAEAIGADADYRRRSSLYLASHRRDVKLLERERRARREIGIEVDLLSPSE
                     IRSRYSFDRPAALLSRVAGEVDPLRLTHALLAAGLRDGLEIYDRTGVARYQSDRKGVL
                     LETADGWRIRAGKAIFATGCNIPPFFPRRTIRLGSSFVVATSPLATFEGWGDDRPLVW
                     ETARPYLYARTTSDGRAIVGGADLPFKGARKLERVQDKQTARVAAQFGQLFPGIRFDV
                     DWSWAGAFA"
BASE COUNT          448 a         1076 c         1033 g          425 t
ORIGIN      
        1 ggtgacggtc gtcggccgga gcgtcatctc ggaccagcgg atgcagggga tggccgacgt
       61 ggtccgctac atccccgggg tcacgatggg ccagggggag ggcaaccgcg accaggcgac
      121 catccggggg aacaacacca cgtcgggctt cttcgtggac gggatgcggg acgacgtgca
      181 gtacttccgc gacctctaca acgtggagcg ggtggaggcg ctgaagggac ccaacgccct
      241 gatcttcggg cggggcaccg gcgggggcgt gatcaaccgg gtcgccaagg aggcgggctg
      301 gacgccggtg cgcgagctga ccctccaggg cggctcctac gacacccggc gcggtgcggt
      361 agacgtgggc cagggggtct cggacgcggt cgcactccgg ctcaacggga tgtacgagaa
      421 ctcccatcgg ttccgccacg acgtgaacct ggagcggtac gggttcaacc ccgccgtcac
      481 cgtcgccgcc ggaccgcgca cccggatcac cgccgactac gagcacttct ccgactaccg
      541 gaccgccgac cggggcattc cctccttcca gggccgtccc gtggggaccg acatccggac
      601 cttcttcggc gatccgtccc ggagctggtc ggacgccgtg atcaacgtgg ggacggcggc
      661 cgtcgatcac gagttgtcgt ccgcgctcca gatccgcagc cgggtcctgg ccgggcacta
      721 cgacaagatg taccagaacg tcttccccgg ctcggtggac gcgaccggca cgcaggtcag
      781 catctccgcc tacaacagca tcaacgaccg gaccaacctc ctcagccaga ccgacctcgt
      841 gtggcgcacc agcaccggct cggtgaacca caccctgctc gccggcgtcg agctgggccg
      901 gcaggtgagc cgcaatctcc gcaataccgg cttcttcgac ggcagcgaga cctcgctgag
      961 cgtgccgctg gaccggccca cgatctcccg ccccatcagc ttccgtcccg gcgagaccga
     1021 tgccgacaac cgggtccggg tccattcggc cggcgtgtac ctgcaggacc agatgaacct
     1081 gacgccgtac ctccagctca tcgccggggc ccggatcgag cggttcgatc tcaccttcca
     1141 caacttccgc aacggggagg acctggagcg cagcgacgac ctgctgtcgc cccgcgcggg
     1201 cgtggtggtg aagccggtgg agccgctgtc gctctacggg agctacggcg tgtcctacct
     1261 gcccagctcg ggcgaccagt tcgcctccct cacggcgacg accgagacgc tggagccgga
     1321 gaagttcgag aacttcgagg tgggcgccaa gctcgacgtg gccgccgggc tctccctcac
     1381 cggcgcggcg taccggctcg accgcagcaa taccagcgcg cccgatccgg tggacccgtc
     1441 acgcacggtg cagaccggga gccagcgcac tcggggaatc gaggtggggg ccgccggcag
     1501 cctcaccccg gcgtggcagg tggcggccgc gtacgcgctg caggacgcgg agatcaccag
     1561 ccgcaccgcc caggcggaac ccggcgccac ggtgccggtc gtgccggagc acacgctctc
     1621 cctgtggaac cgctaccagc tccaccggct gtggggtgtg ggcttcggcg tcgtgtacca
     1681 ggacgacatg ttcgcctcga tcgacaacac ggtcaccctg ccgagcttca cccggttcga
     1741 cgcgggcgtg ttcttcaccc tcaatggcca ccttcgcggc cagatcaacg tggagaacct
     1801 gttcgacgag gagtacttcg tcacctccca cagcaacaac aacatcagcc ccggctcgcc
     1861 ccgcgcggtc cgggcttcgg tgacggccgg gttctagctc ccggcggcgg cgcggcggcc
     1921 ccacctccgc ctcgccgtcg ctactttgtg gcatggacct cacgacgggt gtgcccttct
     1981 ggctggtcag ggacggactg accgccacct accccaagct cgatcaggat cgccgctgcg
     2041 acgtggccat catcggcggc ggcatcaccg gcgcgatgct gggccagcgg ttcgcggagg
     2101 agggcctcca cacggtcctg ctggagggcc gggagatggg ctacggcagc acgggctcct
     2161 ccaccgccct gctgcagtac gagctggaca cccacctggt ggatctcgcc gggcggctgg
     2221 ggcccgccgc ggcccagcgg tcctaccggc tggcggtgga ggcggtggag gggatcgggc
     2281 gcctggccga ggcgatcggg gccgatgccg actaccggcg ccgcagcagt ctctacctgg
     2341 cgtcgcaccg gcgggacgtg aagctgctcg agcgggagcg tcgggcgcgg cgcgagatcg
     2401 ggatcgaggt ggacctgctc tcgcccagcg agatccgctc gcgctactcc ttcgatcggc
     2461 ccgcggccct gctctcccgg gtcgccggcg aggtggaccc gcttcgcctc acccacgcgc
     2521 tcctcgccgc cggcctccgg gacgggctcg agatctacga ccgcaccggc gtcgcccgtt
     2581 accagtcgga ccgcaagggc gtcctgctgg agaccgccga cggctggagg atccgggccg
     2641 gcaaggcgat cttcgcgacc ggctgcaaca ttcccccgtt cttcccccgc cggaccatcc
     2701 ggctcggcag cagcttcgtg gtggcgacct cgcccctcgc gaccttcgag ggctggggcg
     2761 acgaccggcc gttggtgtgg gagacggcgc ggccctacct ctacgcccgg accaccagcg
     2821 acgggcgggc gatcgtgggc ggggccgacc tgccgttcaa gggggcgcgc aagctggaac
     2881 gggtgcagga caagcagacg gcgcgagtgg ccgcccagtt cggccagctc ttccccggga
     2941 tccgtttcga cgtggactgg agctgggccg gcgccttcgc gg
//
LOCUS       DASUYN010000304         3501 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1204636, whole genome shotgun sequence.
ACCESSION   DASUYN010000304 DASUYN010000000
VERSION     DASUYN010000304.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3501)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3501)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3501
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1204636"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(86..1096)
                     /locus_tag="VF061_05995"
     CDS             complement(86..1096)
                     /locus_tag="VF061_05995"
                     /inference="COORDINATES: protein motif:HMM:TIGR02271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YsnF/AvaK domain-containing protein"
                     /protein_id="HEX6669088.1"
                     /translation="MARNKSENRVNKIGDTVVGLFRDQPSAERAIQRLKAAGFTEGQI
                     GVAVRDPERQQAITEETGTQAAEGAKAGAVSGGVLGGVVGLLAGVGALAIPGIGPIIA
                     GGALASTLAGAGIGAAAGGLVGALVGMGIPEEDARHFEQGFQQGGILVTVDAGARSTE
                     AKQALTESGADLGPTARASRATGGLAGATEQERLELREERLDVNTREVEAGEVRVRKE
                     VVTEQRNIEVPVTREEVVIERHQASGREASDQTFGTDEEIRIPLKEEEVDVKKRAVVR
                     EEVSIGKRPVTETKKVSETVRREEARIDSEGDVGFRPFEGTERRRRQLAYSGPERRLA
                     TR"
     gene            complement(1286..1528)
                     /locus_tag="VF061_06000"
     CDS             complement(1286..1528)
                     /locus_tag="VF061_06000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669089.1"
                     /translation="MLQRQARLRPSFSDWYPKLTPGKWHDALWAREVALAQLRKGGAS
                     GIEGERVLPDLHFEFQGGPIVRRSGREVRRIIPATP"
     gene            complement(1605..1832)
                     /locus_tag="VF061_06005"
     CDS             complement(1605..1832)
                     /locus_tag="VF061_06005"
                     /inference="COORDINATES: protein motif:HMM:NF024835.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX6669090.1"
                     /translation="MVRLTVHQLMARRGITAYALSRGTGLSYPSAYRLSRSAGGFGRL
                     HADTLDRLCEFFEVQPGELLQWTPRRARKRR"
     gene            2014..>3501
                     /locus_tag="VF061_06010"
     CDS             2014..>3501
                     /locus_tag="VF061_06010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669091.1"
                     /translation="MALPLAGNAAPHSRPRRRKVGILDLVTKNPRRSLYGRIMNANLA
                     SIMPQVLAVWSEEAGHEVRYVCYTGAEDLLQEIPDDVEVLFIGAFTEAAQLAYALSNL
                     FRRRGAVTVLGGPHARCYPEDAQRYFDYVLGFTDRRVLHEVLEECAPSRPMGRTLSAD
                     RHPSDLPSLAARWKFVEATLAKSTRAIKIVPMIGSLGCPYACSFCIDSTVDYQPLGFG
                     ALSEDLSFLLTRMRDPVVGWHDPNFGVRFDDYMDAIERAVPPGRMRHIAESSLSLLSE
                     PHLQRLQRNGFQALLPGIESWFALGNKSKTRHTGMDKVRQVADHVNLLLRYVPYVQTN
                     FVLGLDSDEGPEPFELTKRFLDLAPGAFPAYSLLSAFGRAAPMNLDYQRAGRVLPFPF
                     TFLNNNHAMNVRPANYSWVEFYDRLVDLTGYSFSWRAIGRRLGATPAMIPRWMNVVRA
                     MSSEGWGRIAYHTTIRGLLDTAPSVRGVMEGEDDRLPAFYEARIRR"
BASE COUNT          487 a         1276 c         1166 g          572 t
ORIGIN      
        1 tcaccctgag cgcagcgaag gggaccatgt ccggcgtggt ccccttcact acgttcagga
       61 tgacaccctt cggttcacgg acttcctacc gggtggccag cctgcgctcc gggcctgaat
      121 acgcgagctg ccgccggcga cgctccgtgc cctcgaaggg ccggaagccg acgtcgcctt
      181 cgctgtcgat ccgcgcctcc tcgcggcgca cggtctccga caccttcttc gtctccgtga
      241 ccggccgctt gccgattgac acttcctcgc gaaccacggc ccgcttcttc acgtccacct
      301 cttcctcctt cagcgggatg cggatctcct cgtccgtgcc gaaggtctgg tccgaggcct
      361 cccggcccga ggcctggtgc cgctcgatga ccacctcttc gcgggtgacc ggcacctcga
      421 tgttccgctg ctcggtcacg acctctttcc ggacccgcac ctcgccggcc tccacctcgc
      481 gggtattcac gtcgagccgc tcctcacgga gctccagccg ctcctgctcc gtggctcccg
      541 cgagaccacc ggtggcccgg gaggcacgcg ccgtcgggcc gagatcggcg ccgctctcgg
      601 tgagcgcctg cttcgcctcg gtcgagcggg cgccggcgtc caccgtcacc aggatgccgc
      661 cctgctggaa gccctgctcg aagtgccgcg cgtcctcctc gggaatcccc atgccgacca
      721 gcgcacccac gagcccgccg gcggccgcgc cgatgccggc gcccgccagg gtggaagcga
      781 gcgctccccc cgcgatgatg ggaccgatgc ccgggatggc cagggccccg acgccggcca
      841 ggaggccgac cacgccaccc agcaccccgc cgctgaccgc gccggccttg gcgccctcgg
      901 cggcctgggt cccggtctcc tcggtgatcg cctgctgccg ctcggggtcg cgcacggcga
      961 cgccgatctg cccctccgtg aagcccgccg ccttcaggcg ctgaatggct cgctcggcgg
     1021 acggctggtc ccgaaacaga ccgaccacgg tgtcgccgat cttgttcact cgattttcgc
     1081 tcttgttccg tgccatatgg tctaccactc cttggtgtcg atggtgaccg gcccggagct
     1141 gtccgtgcct cgcgaagcca cgacgtccgc gagccggttg tcccgtggga cgggagcaac
     1201 ctagggccgc ggcggtgatg gagtggtgac ccgagtcacc ggggtgtcta ctgatttcct
     1261 gcccggtgcg acgatggagg cggtgtcagg gagtggccgg gatgatccgt cgcacctcgc
     1321 ggcccgagcg ccggacgatg gggccgccct gaaactcgaa gtgcaggtcc ggcagcacgc
     1381 gctcaccctc gatcccgctg gctccgcctt tccggagctg ggcgagcgcg acctcccgcg
     1441 cccacaacgc gtcgtgccat tttccagggg tgagcttcgg ataccaatcg ctgaaggacg
     1501 gccgcagccg cgcctgtcgc tggagcatgt gtgtctcggg gggcagggtg actcccagtt
     1561 taacacatcg ggcccctttt ctcgggggcc cgcgtcacat ccggctaccg tcgcttgcgc
     1621 gccctgcgcg gcgtccactg caacagctcg ccgggttgga cctcgaagaa ctcgcacagc
     1681 cggtcgagcg tgtcggcatg caggcggccg aagcccccgg ccgatcggga gagccggtac
     1741 gcgctcggat agctgagccc agtgccgcgg ctgagggcgt aggcggtgat gccgcgccgc
     1801 gccatgagct ggtgaaccgt gaggcgtacc atggggcctt tcgggtgggg aaccgctcgc
     1861 ctgcgatatg cagccttgcg gtatgtagcg ccacagtata gcctagtaga gcgccggaac
     1921 caagaccgag aggcgcgacc accactccga ttactccgcc ccgcttccgg gacccagcga
     1981 ttcgagtgtc acctgccgcc ccaaggtccc cgcgtggctc ttcccctcgc cggtaacgcc
     2041 gcaccccatt cacgcccccg ccgccgcaag gtcggcatcc tcgatctggt caccaagaat
     2101 ccgcgccgca gcctctacgg gcggatcatg aacgccaacc tggcgagcat catgccccag
     2161 gtgctggcgg tgtggagcga ggaggcgggg cacgaggtcc ggtacgtctg ttacaccggg
     2221 gcggaggacc tgctgcagga gatccccgac gacgtggagg tgctcttcat cggcgccttc
     2281 accgaggcgg cgcagctcgc ctacgcgctc agcaacctct tccgccggcg gggggccgtc
     2341 accgtgctgg gcgggcccca cgcccgctgc taccccgagg acgcgcagcg ctacttcgat
     2401 tacgtgctcg gcttcaccga ccgccgggtg ctgcacgagg tgctggagga gtgcgccccc
     2461 tcccgcccga tgggccgcac cctgagcgcg gatcgccacc cgtccgacct gccgagcctg
     2521 gcggcgcggt ggaagttcgt ggaggcgacg ctggcgaagt ccacccgggc gatcaagatc
     2581 gtgccgatga tcggcagcct gggctgccct tacgcctgca gcttctgcat cgactcgacg
     2641 gtggactatc agccgctcgg tttcggcgcg ctgagcgagg acctgtcttt cctgctcacc
     2701 cggatgcggg acccggtcgt cggctggcac gaccccaact tcggggtgcg gttcgacgac
     2761 tacatggacg cgatcgagcg ggcggtgccg ccggggagga tgcggcacat cgcggagagc
     2821 agcctctcac tcctgtcgga gccgcacctc cagcgcctcc agcggaacgg cttccaggcg
     2881 ctgttgccgg ggatcgagtc gtggttcgcg ctggggaaca agtcgaagac ccggcacacc
     2941 gggatggaca aggtccgcca ggtggccgat cacgtgaacc tgctgctgcg ctacgtcccc
     3001 tacgtgcaga ccaacttcgt gctggggctc gacagcgacg aggggccgga gccgttcgag
     3061 ctgaccaagc ggttcctgga tctcgcgccc ggcgcgttcc cggcgtactc gctgctctcg
     3121 gccttcggcc gggcggcgcc gatgaacctg gactaccagc gcgccggccg ggtcctcccg
     3181 ttccccttca ccttcctcaa caacaaccac gcgatgaacg tccggccggc gaactactcc
     3241 tgggtcgagt tctacgaccg gctggtggat ctcaccggct actcgttctc ctggcgggcc
     3301 atcggccggc ggctgggcgc gaccccggcg atgatcccgc ggtggatgaa cgtggtgcgg
     3361 gcgatgtcgt ccgaaggctg ggggcggatc gcctatcaca ccacgattcg ggggctgctg
     3421 gacaccgccc cgagcgtgcg cggcgtcatg gagggggagg acgaccggct gccggccttc
     3481 tacgaggcgc gaatccggcg g
//
LOCUS       DASUYN010000305         2606 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_761802, whole genome shotgun sequence.
ACCESSION   DASUYN010000305 DASUYN010000000
VERSION     DASUYN010000305.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2606)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2606)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2606
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_761802"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..240)
                     /gene="rsfS"
                     /locus_tag="VF061_06015"
     CDS             complement(<1..240)
                     /gene="rsfS"
                     /locus_tag="VF061_06015"
                     /inference="COORDINATES: protein motif:HMM:TIGR00090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0017148 - negative regulation of
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HEX6669092.1"
                     /translation="MTQTPEALRLALDAIQDLKANELVVLDLRGLTDATDYFVIASGT
                     SDAHVRGIAESVIEKLGRRGHRTHHVEGLNGGRWVL"
     gene            complement(237..2084)
                     /locus_tag="VF061_06020"
     CDS             complement(237..2084)
                     /locus_tag="VF061_06020"
                     /inference="COORDINATES: protein motif:HMM:NF014679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegV family protein"
                     /protein_id="HEX6669093.1"
                     /translation="MSVGIAYVDGPRLARSLFAAADWVAAGRDEINRINVYPVPDGDT
                     GTNFSLTLRAVADALRALGDASLPETGRTMARAAVLGARGNSGMMLAHFLLGFSESLG
                     DRPSASATDVAAALRAGSDRLYASLDDPREGTILTVAREAAAAAERAAADSPDIAEFM
                     HRLLEEGEAALARTPELMAVLREAGVVDAGGKGFVRMLEGVVRYIEGDPILAAIEPEA
                     DAAEMPAAMVEVAAERDFQFCTEVLVRGEDLPPGNEVRAAMHTFGGSVVVAAAGDILK
                     IHVHTDSPEAVFTYAARWGRVETTKADDMRAQHRRLAHAERRAVGLVADSSADLPDTV
                     LDRHHIALVPLQVVFGNETFRDRVELKPEEFYRRLRSARDLPTTSQPTPADFVRVLRD
                     ARSEADEVVAVLLSGALSGTLASAQAAVRAAGISGVHLVDSRSASLGLGMLALRGAEL
                     AESGWSGIAIARELERLRGQAGMLLTVDRYDNLLRSGRVSRGKAWLAGMLDVKPILSL
                     DAAGRVIPVDRVRGRDQVVPRVLALLDRRLTPRPKVIRFGVAHAEAPEMAERVRNALV
                     AAYQPRECFVTLATGVLATHVGPGAWAVFYQVEDGPAERSGGVAEGTRE"
     gene            complement(2095..2541)
                     /gene="rplI"
                     /locus_tag="VF061_06025"
     CDS             complement(2095..2541)
                     /gene="rplI"
                     /locus_tag="VF061_06025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HEX6669094.1"
                     /translation="MIEVILREDVKSLGRAGEMVRVKPGYARNYLLPQGLAYEATEGN
                     KKRIAAETRARGVRLQAEKVDAEKLAAALGAVAVTLTGKAGEEGKLFGSVTAQDIADA
                     LGRAGHTVDRRRIELEYPIKTLGEHTVAVRVHPEVHAEVRVSVVAE"
BASE COUNT          357 a          980 c          912 g          357 t
ORIGIN      
        1 gagcacccag cgaccgccgt tgagtccttc gacgtgatgg gtgcggtggc cccggcggcc
       61 cagcttctcg atgaccgact cggcaatgcc gcgcacgtgc gcgtcggagg tgccggaggc
      121 gatcacgaaa tagtcggtgg cgtcggtcag ccctcgcaaa tcgagtacca cgagctcgtt
      181 ggccttcaga tcctgtatgg cgtccagcgc gaggcgaagt gcctccggtg tctgcgtcat
      241 tcccgcgttc cttcggccac gccgcccgag cgctcggcgg ggccgtcttc gacctggtag
      301 aagaccgccc aggccccggg ccccacgtgg gtggcgagca cgccggtcgc gagcgtgacg
      361 aaacattccc gcggctggta ggccgccacg agcgcgttcc gcacccgctc cgccatctcc
      421 ggggcctcgg cgtgcgccac cccgaatcgt atcaccttcg gacgcggtgt gagacgccgg
      481 tccagcaggg cgagcaccct cggcaccacc tggtcccggc cccggacccg gtccactgga
      541 atgacccgcc cggcggcgtc cagtgacagg atcggcttca cgtccagcat gccggcgagc
      601 caggccttgc cgcgggagac ccggccggac cggagcagat tgtcgtaccg gtccaccgtg
      661 aggagcatcc ccgcctggcc ccgcagccgc tcgagctccc gggcgatggc gatcccgctc
      721 cacccggact cggccagctc cgcgccccgg agcgcgagca tgccgaggcc cagcgacgcc
      781 gaccggctat ccaccaggtg gaccccgctg atcccggccg cccgcacggc cgcctgggcg
      841 gacgcgaggg tgccggacag ggcccccgag agcagcaccg ccacgacttc gtccgcctcc
      901 gacctcgcgt cgcggagcac ccgcacgaag tccgccggcg tcggctggga cgtggtgggg
      961 aggtcccggg cgctgcggag gcggcggtag aactcctccg gcttgagctc gacccgatcg
     1021 cggaaggtct cgttcccgaa gaccacctgg agcggaacca gcgcgatgtg gtggcggtcc
     1081 aggaccgtat cgggaagatc ggcggagctg tccgcgacca ggccgaccgc gcgccgctcc
     1141 gcgtgcgcca ggcgacggtg ctgggcccgc atgtcgtccg ccttggtcgt ctccacccga
     1201 ccccagcggg ccgcatacgt aaagacggcc tccgggctgt cggtgtgcac atgaatcttc
     1261 agaatgtccc cggcggcggc cacgaccacg gacccgccga aggtgtgcat cgccgcgcgg
     1321 acctcgttgc cgggcggcag gtcctcgccc cgcaccagca cctcggtaca gaactggaag
     1381 tcgcgctccg ccgcgacctc caccatcgcc gccggcatct ccgcggcatc cgcctccggc
     1441 tcgatggccg cgaggatcgg gtcaccctcg atgtagcgca ccacgccttc gagcatccgc
     1501 acgaagccct tgcctcccgc atccacgact cccgcttccc ggagcacggc catcagctcg
     1561 ggcgtccggg ccagggcggc ctcaccctcc tccaggagcc ggtgcatgaa ctcggcgatg
     1621 tccggcgagt cggccgcggc ccgctcggcg gcggcggcgg cctcccgggc gacggtgagg
     1681 atggtgccct cgcgcgggtc gtcgagcgag gcgtagagcc ggtcggaccc ggcccggagg
     1741 gcggccgcga cgtcggtggc cgacgcgctc ggccggtcgc cgagggactc gctgaacccg
     1801 agaaggaagt gcgccagcat catgcccgag ttgccccggg cgcccagcac cgctgcgcgg
     1861 gccatggtgc ggccggtctc gggaagcgac gcgtcgccga gcgcccgcag ggcgtcggcg
     1921 acggcacgga gcgtgaggct gaagttggtg ccggtgtcgc cgtcggggac cgggtagacg
     1981 ttgatgcgat tgatctcgtc ccggccggcg gccacccagt cggcggccgc gaacagcgag
     2041 cgggcgagcc gcgggccgtc gacgtaggcg atccccacgc tcatgacgcg gcgcctactc
     2101 ggcgacgacc gatacccgca cctcggcgtg gacctccggg tgcacccgca ccgcgacggt
     2161 gtgctcgccc agcgtcttga tgggatactc gagctcgatc cggcgccggt ccacggtgtg
     2221 ccccgcgcga cccagcgcgt cggcgatgtc ctgagcggtg acggagccga agagcttgcc
     2281 ctcttcgccc gccttgccgg tgagcgtcac cgccacggcg ccgagcgcgg cggccagctt
     2341 ctccgcgtcc accttctcgg cctggagccg gacgccgcgg gcccgcgttt ccgccgcgat
     2401 gcgcttcttg ttgccctcgg tggcctcgta ggccagcccc tgggggagga ggtagttgcg
     2461 cgcgtagccg ggcttcaccc gcaccatctc gccggcgcgg ccgagcgact tcacgtcctc
     2521 gcgcaggatc acttcgatca taggtccaac cctccggtgg acggcgtcgc cagccgacgc
     2581 cggaaatcta gccaggtgtc ggcgag
//
LOCUS       DASUYN010000306         3500 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_542718, whole genome shotgun sequence.
ACCESSION   DASUYN010000306 DASUYN010000000
VERSION     DASUYN010000306.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3500)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3500)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3500
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_542718"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1826)
                     /locus_tag="VF061_06030"
     CDS             complement(<1..1826)
                     /locus_tag="VF061_06030"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing sensor histidine kinase"
                     /protein_id="HEX6669095.1"
                     /translation="MSAGDDLFAGGGELGELMRRRDWSATPLGPVDAWPRALRTAVRI
                     MLTSRQPMFVWWGDRLINLYNDAYRAIVGGKHPRALGQPASVVWREIWNDVGPRAASA
                     MERNEGTYDEALLLIMQRHGYAEETYYTFSYSPVPNDEGGTGGILCANTDDTRRIIGE
                     RRLALLRELAAVAGEARTVRDACALSARALATGSRDLPFALVYLEEPEQSRLVLAGAA
                     GVPPGHPAAPPAVDAGAASPWPLAEVLRTGEPREIDDLSEAGTLPAGAWDRPPSRVVA
                     LPVAPSGESGRAAVLVAGLNPYRPFDDDYRGFLDLVGRQIAGAMANAQAYEDERKRAE
                     ALAELDRAKTAFFSNVSHEFRTPLTLMLGPLEEVLARWDPEGAPGERALVQTAHRNGL
                     RLLKLVNALLDFSRIEAGRVRASFRPTDLAALTTELTSSFHSALERAGLRFEVHSRPL
                     PEPVWVDRDMWEKIVLNLLSNAFKFTLRGGITVELGPSADGREAVLTVADTGIGIPAA
                     DLPRLFERFHRVEGSRGRTHEGTGIGLALVQELTRLHGGSVTVDSEADRGSRFSVRVP
                     LGRAHLPADQVETLAPDDSTGTRSDAYVEEALRWLPGAQAAAG"
     gene            complement(1829..2689)
                     /locus_tag="VF061_06035"
     CDS             complement(1829..2689)
                     /locus_tag="VF061_06035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669096.1"
                     /translation="MRPCRYTLALSALALGLGACGDSTDPDDDPLPDNAATAVGLTVR
                     DNVEASFDAFFPSRLLQPLSTGGASDPCVIASAPADTDGDGVPDDASYTFTAPPCRYT
                     GVRGFTLDVVGQLRIEDPAPETAGFTADITFTNLRFSLAAEDSDQNYSVTRNGQVFLS
                     GTPAGLELTGGVQLLRSFTGLSDAAVEHVWTIGFDPEATLQINQPLPNGSVTVAGTVN
                     WSRGDEAFDLTVTTISPLHYTASCDETGQRFDDGELAVSGTFGETPGSVRITWRECGD
                     DPDIEFVSEE"
     gene            complement(2780..>3500)
                     /locus_tag="VF061_06040"
     CDS             complement(2780..>3500)
                     /locus_tag="VF061_06040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669097.1"
                     /translation="FGAALVLGHNLLDGVTPERFGALAPLWQVLHVPGPLEVVPVFLL
                     YPLVPWVGVMALGYAAGDLVFARDERAGRRLALAGLALTAGFVLLRTLDLYGDPSPRL
                     LEGGAALVAMSFLNLTKYPPSLLYLLMTIGPALVALAAFRRARGPLADALVTFGRVPF
                     LFYVAHLYLIHALAVAAGVAQGYPASDLRDLFLRLPAGYGFGLPVIYAVWLGVVALLY
                     PVCRRYAELKARSRAWWLSYL"
BASE COUNT          512 a         1211 c         1363 g          414 t
ORIGIN      
        1 ccggccgccg cctgagcccc cggcagccag cggagcgcct cctcgacgta ggcgtcgctc
       61 cgcgtcccgg tggaatcgtc gggcgcgagg gtctccacct ggtccgcggg caggtgcgcc
      121 cggccgagcg gcacccgtac gctgaaccgg ctcccgcggt cggcctcgct gtccacagtg
      181 acgctgccgc cgtgcagccg ggtcagctcc tgcaccagcg ccagcccgat gccggtgccc
      241 tcgtgggtgc gcccgcggga cccctccacc cggtggaagc gctcgaacag ccggggcagg
      301 tccgccgccg ggatgccgat gccggtgtcc gccaccgtca gcaccgcctc gcggccgtcc
      361 gccgacgggc ccagctccac ggtgatcccg ccccggagcg tgaacttgaa cgcgttggac
      421 agcaggttga ggacgatctt ctcccacatg tcgcggtcca cccagaccgg ctccggcagc
      481 ggcctggaat gcacctcgaa ccggaggccg gcgcgctcca gggccgaatg gaagctcgag
      541 gtcagctcgg tcgtgagcgc ggcgagatcg gtcggccgga agctcgcccg cacgcggccg
      601 gcctcgatcc gggagaagtc caggagcgcg ttcaccagct tgagcagccg aaggccgttg
      661 cggtgggcgg tctgcaccag cgcgcgctcg ccgggggcgc cctcgggatc ccagcgggcg
      721 agcacctcct ccagcgggcc gagcatcagg gtgagcgggg tgcggaactc gtgggagaca
      781 ttggagaaga acgccgtctt ggcccggtcc agctcggcga gcgcctcggc gcgcttgcgc
      841 tcgtcctcgt aggcctgcgc gttggccatc gcgcccgcga tctgtcggcc gacgagatcg
      901 aggaagccgc ggtagtcgtc gtcgaaggga cggtagggat tgagcccggc gacgagcacg
      961 gcggcgcggc cggactcacc ggaaggcgcg accggcagcg cgacgaccct ggacggcgga
     1021 cggtcccacg cgcccgcggg cagcgtgccg gcctccgaga ggtcgtctat ctcgcggggc
     1081 tccccggtcc ggagcacctc ggcgagcggc cagggcgacg ccgcgccggc gtccaccgcc
     1141 ggaggcgcgg ccggatggcc gggcggcacg ccggcggccc cggcgagcac caggcggctc
     1201 tgctccggct cctcgagata gacgagcgcg aaggggaggt cgcgcgagcc ggtcgccagc
     1261 gcgcgggcac tgagggcgca ggcgtcgcgc acggtgcggg cctcgcccgc cacggccgcc
     1321 agctcgcgga gcagggcgag ccggcgctcg ccgatgatgc gccgggtgtc gtcggtgttg
     1381 gcgcagagga tgccgccggt gccgccctcg tcgttgggca ccgggctgta ggagaaggtg
     1441 tagtaggtct cctccgcgta gccgtggcgc tgcatgatga gcagcagcgc ctcgtcgtag
     1501 gtcccctcgt tgcgctccat ggcggaggcc gcgcgcgggc ccacgtcgtt ccagatctcg
     1561 cgccagacca ccgaggccgg ctgccccagc gcccgcgggt gcttcccgcc gacgatggcg
     1621 cggtaggcgt cgttgtagag gttgatcagc cggtcgcccc accagacgaa catcggctgg
     1681 cgggaggtga gcatgatgcg gacggcggtc cggagcgcgc gcggccacgc gtccaccggg
     1741 ccgaggggag tggcggacca gtcccggcgg cgcatgagct cacccagctc accgccgccg
     1801 gcgaagagat cgtcccccgc cgacacccct actcctcgga gacgaactcg atgtcggggt
     1861 cgtccccgca ttcccgccac gtgatccgca ccgagcccgg cgtctcgccg aaggtgccgg
     1921 agacggcgag ctcgccgtcg tcgaagcgct ggccggtctc gtcgcaggag gcggtgtagt
     1981 ggaggggcga gatggtggtg acggtgaggt cgaaggcctc gtccccccgg gaccagttca
     2041 ccgtgccggc cacggtgacc gagccgttcg gcagcggctg gttgatctgg agggtggcct
     2101 ccgggtcgaa gccgatggtc cagacgtgct ccaccgcggc atcggagagc ccggtgaacg
     2161 agcggaggag ctggaccccg ccggtgagct ccagcccggc gggggtgccg ctgaggaaga
     2221 cctgcccgtt tcgggtgacg gagtagttct ggtccgagtc ctccgcggcc aggctgaagc
     2281 ggaggttggt gaaggtgatg tccgcggtga agccggcggt ctcgggcgcc ggatcctcga
     2341 tcctgagctg gcccaccacg tcgagagtga aaccgcgcac gccggtgtag cggcagggcg
     2401 gcgcggtgaa ggtgtagctg gcgtcgtcgg gcaccccgtc gccgtcggtg tcggccgggg
     2461 cggaggcgat gacgcaggga tcgctcgccc cgccggtgct caggggctgg aggagccggg
     2521 acgggaagaa ggcgtcgaag gaggcctcca cgttgtcccg gaccgtgagc ccgacggcgg
     2581 tggcggcgtt atcggggagc ggatcgtcgt cgggatcggt ggagtcgccg cacgccccca
     2641 ggccgagcgc gagggcgctg agggcgagcg tgtacctgca cgggcgcatg gccgggcctc
     2701 cggaaacggg gtcgtgcagg aggatagccc ggccggggcg ggacctacaa gccgcgcggc
     2761 cggtggcccc cgaccccgct cagaggtacg acagccacca ggcccggctc cgcgccttca
     2821 gctcggcgta gcgtcggcag accgggtaga gcagcgctac cacgccgagc cagacggcgt
     2881 agatcaccgg caggccgaag ccgtagccgg cggggagccg gagaaacagg tcgcggaggt
     2941 cggaggcggg gtatccctgg gccaccccgg ccgcgaccgc cagcgcgtgg atcaggtaca
     3001 ggtgcgccac atagaagagg aagggcaccc ggccgaaggt gacgagcgcg tcggccagcg
     3061 ggccccgcgc ccggcggaac gcggcgagcg cgaccagcgc cggcccgatc gtcatgagca
     3121 ggtacagcag cgacgggggg tacttggtca ggttcaggaa cgacatggcg accagcgcgg
     3181 cgccgccctc gagcaggcgg ggcgaggggt cgccgtacag gtccagggtc cggaggagga
     3241 cgaagcccgc ggtgagcgcc aggcccgcga gcgcgaggcg ccggccggct cgctcgtccc
     3301 gggcgaagac cagatcgccc gcggcgtacc ccagggccat cacgccgacc cagggaacca
     3361 gcggatacag caggaagacc ggcaccacct cgagcggtcc ggggacgtgc agcacctgcc
     3421 agagcggcgc gagcgcgccg aaccgctcgg gggtcacgcc gtccaggaga ttgtgaccga
     3481 gcaccagggc cgcgccgaag
//
LOCUS       DASUYN010000307         3439 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1205664, whole genome shotgun sequence.
ACCESSION   DASUYN010000307 DASUYN010000000
VERSION     DASUYN010000307.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3439)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3439)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3439
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1205664"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..416)
                     /locus_tag="VF061_06045"
     CDS             complement(<1..416)
                     /locus_tag="VF061_06045"
                     /inference="COORDINATES: protein motif:HMM:NF022187.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEX6669098.1"
                     /translation="MARAGVAIFGAGRMGQGLALALQRSGWPVLLVSRTLHAVAAPLR
                     LHPGGRAAAVRESSAVLLAVPDRAVAEVAAELAAEGAVEARHVVLHLSGLLDRGALAP
                     LASTGAGLGSFHPLQTVSEPATAADQLRGAYAGIEG"
     gene            complement(510..2156)
                     /locus_tag="VF061_06050"
     CDS             complement(510..2156)
                     /locus_tag="VF061_06050"
                     /inference="COORDINATES: protein motif:HMM:TIGR00225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEX6669099.1"
                     /translation="MRQRWGVIVMVSVISFLSGGWLLQRGTAAGGNVYQQARLFDDVL
                     GHVSAYYVDSLGETDLYQKATEGMLEQLQDPYSVLLTGDDYKALTEQTSGNYAGLGIQ
                     IDVRDGWITVVAPLPETPAERAGIQTGDQIIEVDGKSTEGWKNDEAVKALRGAAGSKV
                     TITVRRSGIPDPMKYSLTRAQIHIRSVPSGNMFEGGVGYISLNPVSETSAGELRQEIT
                     AMKKKGMKSLILDLRYNPGGLLDQGVEVSDLFLDSKQEIVSTRGRARGSTKQFFDDAR
                     QSWPELPIVVLVNEGTASAAEIIAGALQDHDRAVVVGTPTFGKGLVQTLFPLGEGVAL
                     KLTTARWYTPSGRTIQRAVESEEEQMSQAALEASDTLLGEPDPSVSDSAIDARPVYKT
                     GAGRIVRGGGGIVPDIVTRYDTLTEAERDFVKALGTDLPVYRGVITSYALEQKSARAV
                     PNENFTVTPAMRQQVYQRLKQKGVQLSPEEFKQGGRLVDQQIGYELARYVFGKSAEFR
                     RRAVDDRQMQTALDLLRKAGTPKELLGLAIAGSTPESARH"
     gene            complement(2204..2845)
                     /gene="tmk"
                     /locus_tag="VF061_06055"
     CDS             complement(2204..2845)
                     /gene="tmk"
                     /locus_tag="VF061_06055"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR00041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004798 - thymidylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HEX6669100.1"
                     /translation="MTRPGLFVVLEGTEGSGKSTLALALAERMRQAGLDPLVVREPGG
                     TQAAEMARQALLDPEHHVGPVAELFFYLAARADLVQKLIRPALAEGRVVLSDRFAMST
                     EAYQMAGRGLPPDVVHPANRAAADGLVPDLTLILDLSPEVGQARQVAGGKRLDRLDRE
                     SREFHRRVVEYYLAAGGEGVRHLDGRLPPDRLLQAAWAEILKLAPERFGAVTS"
     gene            complement(2842..3195)
                     /locus_tag="VF061_06060"
     CDS             complement(2842..3195)
                     /locus_tag="VF061_06060"
                     /inference="COORDINATES: protein motif:HMM:NF017902.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlbF family regulator"
                     /protein_id="HEX6669101.1"
                     /translation="MIWDKAQELGRQIGQSSEYQALRRAESSLREDKETVSKLDQIQT
                     LARQVDQAIAQGQMPDTATAEAYENAVRELETSPVGQAYVVARSNFEKLMARVNQQIS
                     EGMEKGATSSIITLG"
     gene            complement(3192..>3439)
                     /locus_tag="VF061_06065"
     CDS             complement(3192..>3439)
                     /locus_tag="VF061_06065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669102.1"
                     /translation="KAWEPDVALVSGPDGLDATVRLVREARDVLRPAGWLALEVDCTR
                     ARAVAAAAGSLGWMDIAIHADPFGRERYLLARRSAEP"
BASE COUNT          486 a         1272 c         1123 g          558 t
ORIGIN      
        1 tcaccctcga tcccggcgta agcgccgcgc agctgatccg ctgcggtcgc cggctccgag
       61 acggtctgca gcgggtggaa cgatcctagt cccgcaccgg ttgacgccag cggagcgagc
      121 gctccgcgat cgagcaatcc cgatagatgc aggacgacat gacgggcttc gactgctccc
      181 tccgccgcca gctccgcggc gacttccgcc accgcgcggt cgggaacggc cagcaggacc
      241 gccgacgact cgcgcaccgc cgctgcgcgg ccgcccgggt gcagccgcag aggagccgcc
      301 acggcgtgca gcgtcctgga gacgagcaag accggccatc cgctgcgctg cagcgccaga
      361 gcgagtccct gccccatccg gcccgcaccg aatatcgcca cacccgctct cgccaccggt
      421 cgctccacgg atggaggtcc ccgataccaa cgggcccggc caccgctcgg gtgaccgggc
      481 ccctgccgat ttcgaaccgc cggctcagct cagtgccgtg ccgactccgg cgtgctgccc
      541 gcaatcgcca gcccgagcag ttccttgggc gtgccggcct tgcgcaggag gtcgagcgcc
      601 gtctgcatct gccggtcgtc gactgcgcgg cgacggaact cggcggattt tccgaacacg
      661 tagcgggcga gctcgtagcc gatctgctgg tccaccaggc ggcccccctg tttgaactcc
      721 tcgggggaca gctgcacgcc cttctgcttc agccgctggt agacctgctg ccgcatcgcc
      781 ggcgtgacgg tgaagttctc gttgggaacc gcgcgggcgc tcttctgctc cagggcgtac
      841 gaagtgatca cgccccgata caccgggagg tcggtgccga gggccttcac gaaatcgcgc
      901 tccgcctcgg tgagcgtgtc atagcgggtc acgatgtcgg gcacgatgcc gccgccgccg
      961 cgcacgatcc tgccggcgcc ggtcttgtag accggccgcg cgtcgatggc ggagtccgag
     1021 accgacgggt cgggctcgcc cagcagggtg tcgctggcct cgagcgccgc ctgcgacatc
     1081 tgctcctcct cgctctccac cgcgcgctgg atggtgcgcc cgctcggcgt gtaccaccgg
     1141 gcggtcgtca gcttcagcgc gacgccctcg cccaggggga agagggtctg gaccaggccc
     1201 ttgccgaagg tcggcgtgcc gacgacgacc gcgcggtcgt gatcctggag cgcgccggcg
     1261 atgatctccg cggcgctggc ggtgccctcg ttcaccagca cgacgatcgg cagctccggc
     1321 cagctctgcc gggcatcgtc gaagaactgc ttggtcgagc cccgggcccg cccgcgggtc
     1381 gacacgatct cctgcttgct gtcgaggaag aggtcggaga cttccacccc ctggtccagc
     1441 aggccgccgg ggttgtagcg cagatcgaga atgagcgact tcatcccctt tttcttcatc
     1501 gccgtgatct cctgccggag ctcgccggcg gaggtctcgc tcacgggatt cagggagatg
     1561 tagcccacgc cgccctcgaa catgttcccc gaaggcacgg agcggatgtg gatctgggcc
     1621 cgggtgaggg aatacttcat ggggtcgggg atgccggagc ggcgcacggt gatggtgacc
     1681 ttgctgccgg ccgcgccccg gagagccttc accgcctcgt cgttcttcca gccctcggtg
     1741 gacttcccgt ccacctcgat gatctggtcg ccggtctgga tcccggcgcg ctccgccggc
     1801 gtttccggca gcggggcgac caccgtgatc catccgtcgc gcacgtcgat ctgaatgccg
     1861 agccccgcgt aattgccgga ggtctgctcg gtgagcgcct tgtagtcgtc gccggtcagg
     1921 agaaccgagt acgggtcctg cagctgctcc agcatgccct cggtggcctt ctggtacagg
     1981 tcggtctcgc ccagggagtc cacgtagtag gcgctgacgt gacccagcac gtcgtcgaag
     2041 aggcgagcct gctggtatac gttcccgcct gccgcggtgc cgcgctgcag cagccagccg
     2101 ccgctcagga acgagatgac ggataccatg acgatgacgc cccagcgctg ccgcattccc
     2161 gacctccgat cttcgaccag cccacgacga agcaggtaga cctttaactc gtgacggcgc
     2221 cgaagcgttc cggcgccagc ttcaggatct ccgcccaagc cgcttgcaag agccggtccg
     2281 gcggcaacct cccgtccaaa tgtcgcaccc cttccccacc ggccgccaga tagtactcga
     2341 cgacccggcg gtggaactcc cggctctccc ggtccagccg gtccaaccgc ttcccgcccg
     2401 caacctgccg cgcctggccg acttcggggc tgaggtcgag aatcaaggtg aggtcgggga
     2461 cgaggccgtc ggccgcggca cggttggccg ggtggaccac atcgggtggg aggccgcgcc
     2521 ccgccatctg gtaggcctct gtggacatgg cgaaacggtc tgaaagcacc accctgccct
     2581 ccgcgagcgc cggtcggatc agcttctgca ccaggtccgc ccgggccgcc aggtagaaga
     2641 aaagctcggc cacgggcccg acgtgatgct cgggatcgag cagcgcctgc cgcgccatct
     2701 cggctgcctg ggtgccgccg ggctcgcgaa cgaccagcgg atccagtccc gcctgccgca
     2761 tccgctccgc cagcgcgagc gcgagggtgg acttccccga tccctcggtg ccctccagga
     2821 ccacgaacag gcctggccgg gtcatcccag ggtgatgatg ctgctggtcg cccccttctc
     2881 catgccttcg ctgatctgct ggttcacccg cgccatcagc ttctcgaagt tgctgcgggc
     2941 gacgacgtac gcctgcccga ccgggctggt ctccagctcc cggaccgcgt tctcgtaggc
     3001 ctccgcggtc gccgtgtccg gcatctgccc ctgggcgatc gcctggtcca cctgccgcgc
     3061 gagcgtctgg atctgatcca gcttgctcac cgtctccttg tcctcgcgca gcgaggattc
     3121 ggcgcgcctg agcgcctggt actccgatga ctggccgatc tgtcggccga gctcctgagc
     3181 cttgtcccag atcacggttc tgcgctcctc cgagcgagca ggtagcgctc gcgtccgaat
     3241 gggtcggcat ggatggcgat gtccatccag cccagcgatc ctgccgcggc ggccacggcg
     3301 cgcgcgcggg tgcagtccac ctccagcgcc agccaccctg cggggcggag cacgtcgcgc
     3361 gcctcccgca ccagcctcac cgtcgcgtcc agtccgtcgg gcccgctcac cagggccacg
     3421 tccggctccc atgccttca
//
LOCUS       DASUYN010000308         2447 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1206066, whole genome shotgun sequence.
ACCESSION   DASUYN010000308 DASUYN010000000
VERSION     DASUYN010000308.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2447)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2447)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2447
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1206066"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1234
                     /locus_tag="VF061_06070"
     CDS             <1..1234
                     /locus_tag="VF061_06070"
                     /inference="COORDINATES: protein motif:HMM:NF020660.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha-amylase/4-alpha-glucanotransferase
                     domain-containing protein"
                     /protein_id="HEX6669103.1"
                     /translation="WLDRFMDVIGEQVERGDVRLSRLDEALDDVPSSGIAYLPTASYT
                     EMESWSLPPDAALRLARLRHDLGEARVSGPDGALVRGAHWRNFLAKYSESNRMHKKMQ
                     ALSALCRRRGDPAEARRAIGRAQCNDAYWHGVFGGLYLPHLRDAIWRELARAEGELRR
                     GKGLAYEVLDFDADGHPEIWVHSAAFSALVSPVRGGAIEEYTVFAAGINYVNVLTRRR
                     EAYHDLALERAAAAAGQGDGGTASIHDIEEGIRLDVRPPLDREDRALLIERLLPASLA
                     QEDYARGDYPQVYSWARTAFRYTVQRRRGALEIACDAEEGGVRLAKRIRLAGDGELSV
                     RYAWDPGLAPDDVFTTELSLAGPLNIEAAPEADVWRHAIETVAKSERGLDRTRQGESL
                     TFRWPARLGEASLVLRPA"
     gene            complement(1239..1625)
                     /locus_tag="VF061_06075"
     CDS             complement(1239..1625)
                     /locus_tag="VF061_06075"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX6669104.1"
                     /translation="MPRFGHLLSPTAMLTAVLAGGAPAQSAPGVSDLEYEGWRQYNVH
                     CARCHGQDALPNPVTADLLTSLAPGGAAADQGVFTAVVTGGRVERGMPAFKETLEPRH
                     LEAMYAYLKGRAEKRIPPGRPKRPAS"
     gene            complement(1630..2415)
                     /locus_tag="VF061_06080"
     CDS             complement(1630..2415)
                     /locus_tag="VF061_06080"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX6669105.1"
                     /translation="MMGSPWYAVSELRPRATAWAGLAALVLVAACGGEREVPGGNGSV
                     ATVDTAAAPAAPAAGDTTAVSTDTAGAVERAPATRADTQPAPAAAPSEKPAPAPKPAP
                     KPAPAPKPAPAREQIAASDTAAPAPSTPAQPQEPAPAPETQTATAPLRDEYHQAPKDT
                     VDQATYDGWKQYNLNCARCHGEDVLGSTIAPHLVTSLKPDGPIPTQESFMQVVCAGRP
                     EKGMPAWCALGMEPAKINWIYSYVKGRSEGKLGPGRPALREGS"
BASE COUNT          309 a          854 c          913 g          371 t
ORIGIN      
        1 ctggctcgac cggttcatgg acgtgatcgg cgagcaggtg gagcggggcg acgtgcggct
       61 gagccggctg gacgaggcgc tcgacgacgt gccgagcagc gggatcgcct atctccccac
      121 ggcctcctac accgagatgg agagctggtc gctcccgccc gatgcggccc tgcgcctcgc
      181 ccggctgcgg cacgacctcg gcgaggccag ggtctccggc cccgacggcg cgctggtgcg
      241 cggggcgcac tggcggaact tcctcgccaa gtattccgag tccaaccgga tgcacaagaa
      301 gatgcaggca ctgtcggccc tctgccggcg gcggggcgat ccggcggagg cccgtcgcgc
      361 gatcggccgg gcgcagtgca acgacgccta ctggcacggc gtgttcggcg gactctacct
      421 gccgcacctg agggacgcga tctggcggga gctggcccgg gccgaggggg agctgcgccg
      481 gggcaagggg ctggcctacg aggtgctcga cttcgacgcg gacggccatc cggagatctg
      541 ggtccactcc gcagcgttct ccgcgctggt gagtccggtg cgcgggggag cgatcgagga
      601 gtacaccgtg ttcgcggccg ggatcaacta cgtcaacgtg ctgacccggc ggcgcgaggc
      661 ctaccacgac ttggccctcg agcgcgccgc tgccgccgcg ggacaggggg acggcgggac
      721 cgccagcatc cacgacatcg aggagggtat ccgactggac gtccggcccc cgctcgaccg
      781 cgaggaccgc gcgctgctga tcgagcggct cctgccggca tcgttggcgc aggaggacta
      841 cgcccgaggc gactatcccc aggtctactc ctgggcgcgg acggcatttc gatatacggt
      901 gcagcgcaga cgcggcgctc tggagatcgc ctgcgacgcc gaagaaggcg gcgtgcggct
      961 ggccaagcgg attcgcctgg cgggagacgg cgagctctcg gtacggtacg cctgggatcc
     1021 cggcctcgct cccgacgatg tcttcacgac cgagctttcg ctcgcggggc cgctgaacat
     1081 cgaggccgca cccgaggcgg acgtctggcg gcatgccatc gagacggtgg cgaaatcgga
     1141 gcgcggcctc gaccgcaccc ggcagggaga gtcgctgacg ttccgctggc cggcccggct
     1201 gggggaggcc tcgctcgtgt tgcgcccagc ctagcgggtc agctcgcggg ccgcttcggc
     1261 cgtccgggtg ggatccgctt ctccgccctg cccttgaggt aggcgtacat cgcttccagg
     1321 tgccggggct cgagggtctc cttgaacgcc ggcatccccc gctccactct accccccgtc
     1381 acgaccgccg tgaacacgcc ttgatccgcc gccgctcccc cgggggccag gctggtgagc
     1441 aggtcggcgg tgaccgggtt gggaagggca tcctgcccgt gacagcgcgc gcagtgcacg
     1501 ttgtattggc gccagccctc gtactccagg tcgctcacgc cgggcgcgct ttgcgccggg
     1561 gcaccgccgg cgaggacggc cgtgagcatc gcggtcggtg agagaaggtg gccgaagcgg
     1621 ggcatccgct cagcttccct ctcggagggc ggggcgtccc ggccccagct tgccctcgct
     1681 ccggcccttc acgtaggagt agatccagtt gatcttcgcg ggctccatgc cgagggcgca
     1741 ccaggccggc atgcccttct cggggcggcc ggcgcagacg acctgcatga acgactcctg
     1801 cgtcgggatg ggcccgtcgg gcttgagtga cgtcaccagg tggggggcga tggtggaacc
     1861 caggacgtct tctccgtggc agcgggcgca gttcaggttg tactgcttcc agccgtcgta
     1921 ggtggcctgg tccaccgtgt ccttgggcgc ctggtggtac tcgtcacgca gcggcgcggt
     1981 ggcggtctgc gtttccgggg ccggcgccgg ctcctgcggc tgcgccgggg tgctgggcgc
     2041 aggcgcggcc gtgtccgacg cggcgatctg ctcccgcgcg ggcgcgggct tcggtgccgg
     2101 cgcgggcttc ggtgccggct tcggcgccgg tgcgggcttc tcactgggcg ccgcagccgg
     2161 tgccggctgg gtgtccgctc gcgtggctgg ggctcgctcc accgctccag cggtatcggt
     2221 cgagaccgca gtcgtgtccc ccgctgcagg ggcggcgggc gccgccgcgg tgtccaccgt
     2281 ggctaccgac ccgttgccgc cggggacctc gcgctcgccg ccacaggccg cgaccagcac
     2341 cagggccgcg agacccgccc acgctgtcgc cctggggcga agctccgaga ctgcatacca
     2401 gggagagccc atcattctgt catcctttcc gaggtgagag ccgcatc
//
LOCUS       DASUYN010000309         2526 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1866933, whole genome shotgun sequence.
ACCESSION   DASUYN010000309 DASUYN010000000
VERSION     DASUYN010000309.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2526)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2526)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2526
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1866933"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..583
                     /locus_tag="VF061_06085"
     CDS             <1..583
                     /locus_tag="VF061_06085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669106.1"
                     /translation="TTAKWFTPSGRWVQRPPAQVAGGAGNRTPALEPQVMRTRAGRPI
                     PDQSGILPDLTVRSSLRTDGERVLYSALGDDLEQFRQVLSAYAAELRAEGSMTDESFQ
                     VTAAMREALYTRLLEAGVSLTPETYEEAAAYVADQLGYEISRELFGTESVVRRQAKAD
                     RQLLAALRLLRGSDSQQETITTAVATQASGHQR"
     gene            complement(609..>2526)
                     /locus_tag="VF061_06090"
     CDS             complement(609..>2526)
                     /locus_tag="VF061_06090"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX6669107.1"
                     /translation="NEYPLELPGGPRVVHAAVDLRGPVPLLVRGVLVVLLDAAVLGAL
                     WFLAEVVSGARPRQPRWRSLSRSFRIRLAATLALFFIVPAVGFAAWSFDRLTEEVERS
                     RDLLITQTLRDAAITAGGSLRGPDDGLEERLRELSRRIDADLGLYEGGRLAGTSTPVL
                     EDLGVMPPLMDPSAFAALGLEGELELTRDGAVREPSQRVGYRVVQPGFPSELGVLATP
                     QPAEDPSLAVRRLDLALVLLLATLAGVAAALAGAGRASRALSRPVAELRRSAIALGKG
                     DPTPARSDHPPLEFEPVFGAFERMAADIRTSHHALEDARKRTAAVLATVATGVVGLDP
                     QGRVLIANPQATEIIGTTLGEGEPFLERLGPEWSSLALVVTRFLQDPEAEATAELEVD
                     GRRLTVQLAPLGPDVRGVVIAINDVTDLSRAERVLAWGEMARQVAHEIKNPLTPMRLG
                     MQHLRRVYRDRRGDFDRTLEETAERMLAEIARLDTIARAFSRFAAPAGDTEPLDRIDL
                     GAVIGEVVQLYRLAEEGCEVELQVEPQAFGAARADEVKEVMVNLLENARNAGARRVHV
                     AVRRGEISVSDDGAGIKPDLLPRIFEPRFSTTTSGSGLGLAIVKRLVESWGGSIEVES
                     EEGRGPTIVVRLPA"
BASE COUNT          368 a          973 c          858 g          327 t
ORIGIN      
        1 gaccacggcc aagtggttta ccccgagcgg gcggtgggtg cagcggcccc ccgcgcaggt
       61 ggcgggtggc gccggcaacc ggacccctgc cctcgaaccg caggtcatgc gcacccgtgc
      121 cggacggccg atcccggacc agagcgggat cctgcccgac ctgacggtcc gctcgtcgct
      181 gcgcaccgac ggcgagcggg tcctctactc cgcgctgggt gacgacctcg agcagttccg
      241 tcaggtccta agcgcctacg ccgccgagct ccgggccgaa ggcagcatga ccgacgagtc
      301 cttccaggtg accgccgcca tgcgggaggc actgtacacc cgactcctcg aggccggtgt
      361 ctctctgact ccggagacct acgaggaagc cgccgcctac gtcgccgacc agctcggcta
      421 cgagatctcg cgcgagctgt tcggcaccga gtccgtggtg cggcggcagg cgaaggccga
      481 ccggcagctg ctggccgcgc tccggctcct ccgcggctcg gactcgcagc aggagaccat
      541 caccaccgcc gtcgccaccc aggcgtcggg gcaccagcgg tagtcccgga ggggaacgcc
      601 gccggggcct acgccggcag gcgcaccacg atcgtcggtc cccgcccctc ttcgctttcc
      661 acctcgatcg acccgcccca gctctccacc agtcgcttca cgatcgccag ccccagcccc
      721 gagccgctgg tcgtggtcga gaagcgaggc tcgaagatcc gcggcagcag gtccggcttg
      781 attccggctc catcgtcgga gacactgatc tcaccccggc ggaccgccac atggacgcgc
      841 cgggcgccgg cgttgcgggc gttttccagg aggttgacca tcacttcctt cacctcgtcc
      901 gcccgggcgg cgccgaaggc ctgcggctct acctgcagct ccacctcgca cccttcttcg
      961 gccagccggt agagctggac cacctcaccg atcacggcgc cgaggtcgat gcggtccagc
     1021 ggctcggtat cgcccgccgg cgcggcgaac cggctgaagg cgcgagcgat ggtgtccagc
     1081 cgcgcgatct cggccagcat ccgctccgcg gtctcctcca gcgtgcggtc gaagtcaccc
     1141 cggcgatccc ggtatacccg ccgcaggtgc tgcatgccga gccgcatcgg agtaagggga
     1201 ttcttgatct cgtgcgccac ctgccgggcc atctcccccc aagccagcac ccgctccgcc
     1261 cgcgagaggt cggtgacgtc gttgatcgcg atgaccacgc cgcgcacgtc cggccccagc
     1321 ggcgcgagct gcaccgtgag cctccggcca tcgacctcga gctccgccgt cgcctccgct
     1381 tcggggtcct ggaggaagcg cgtcaccacc agcgccagcg acgaccactc gggtcccagc
     1441 cgctccagaa agggctcccc ctctcccaac gtggtgccga tgatctcggt ggcctgcgga
     1501 ttggcgatca gtacccgccc ctgcggatcg aggccgacca caccggtcgc cacggtggcg
     1561 aggaccgctg cggttcgctt cctggcgtcc tccagggcgt ggtggctggt gcggatgtcg
     1621 gcggccatcc gctcgaacgc gccgaatacc ggttcgaact ccaacggcgg atggtcgctc
     1681 cgggccggcg tcgggtcgcc cttgcccagc gcgatcgccg agcgccggag ctccgccacc
     1741 ggccgggaca gcgcgcgcga ggcacggccc gcgccggcca gcgccgcggc gacgccggcc
     1801 agcgtcgcca gaaggagcac cagcgcgagg tcgagccgcc gcacggcgag ggacggatcc
     1861 tccgccggct gcggggtggc gaggaccccc agctccgagg gaaagccagg ctgcaccacc
     1921 cggtagccga cccgctggct gggctcgcgg accgcgccgt cccgggtcag ctccagctct
     1981 ccttccaggc ccagtgcggc aaatgccgac gggtccatca gggggggcat caccccgaga
     2041 tcctccagta ccggggtgct ggttcctgcg aggcggccgc cctcgtagag tcccaggtcc
     2101 gcatcgatcc gccggctcag ctcgcgcagg cgctcttcca gcccgtcgtc cggaccccgc
     2161 aaggagccgc cggcggtgat cgcggcgtcc cggagcgtct gggtgatcag caggtcgcgg
     2221 ctgcgctcga cctcctcggt gagccggtcg aagctccagg cggcgaagcc caccgccggg
     2281 acgatgaaga agagggcgag cgtggccgcg agccggatgc ggaacgaccg cgagaggctc
     2341 cgccagcgcg gctgccgggg ccgtgcgccc gagacgacct cggcgaggaa ccagagcgcg
     2401 cccagcaccg cggcatcgag cagaaccacc agcacgccgc gcaccaggag cggcaccggt
     2461 ccccggagat ccaccgcggc gtggacgacg cggggcccgc ccggcagctc cagcggatac
     2521 tcattg
//
LOCUS       DASUYN010000310         2349 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_544290, whole genome shotgun sequence.
ACCESSION   DASUYN010000310 DASUYN010000000
VERSION     DASUYN010000310.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2349)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2349)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2349
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_544290"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..980
                     /gene="dnaA"
                     /locus_tag="VF061_06095"
     CDS             <1..980
                     /gene="dnaA"
                     /locus_tag="VF061_06095"
                     /inference="COORDINATES: protein motif:HMM:TIGR00362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA];
                     GO_process: GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HEX6669108.1"
                     /translation="AAHAVAEAPGKLYNPLFIYGATGLGKTHLMQAIAHTVCERQPDT
                     RVLYVGAEQFINEVIESIHSRTMPEFRRRYRMDVDLFLVDDVHFLEGKEMTQEEFFHT
                     FNALYEGNKQIVLTSDRPPKEIPGLEARLVSRFEWGMVADIGQPDLEHRIAILRKKQE
                     QDHLEMTIPDDVLRFIAEHVRSNVRELEGCIIKLLLFASLKHKEVSIELAREALSDRI
                     RPGEDGPAPRARPSINKVQEVVARRWGVTPEGLRSKARIKTLTVPRQIAMYLARELLE
                     MQLVEIGQAFGGRDHSTVIHSVDKVSRQMTRDRSFRERVEHARQELSAE"
     gene            1201..2316
                     /gene="dnaN"
                     /locus_tag="VF061_06100"
     CDS             1201..2316
                     /gene="dnaN"
                     /locus_tag="VF061_06100"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HEX6669109.1"
                     /translation="MKLTITREQLQEGLVAVAAAVPAKTTLPILSNILLEATKDGIRL
                     SGTDLDISVSTTAPAQVDQEGAITLPARKLVEIVRELPSAAIRLTGAGEQRVTIECGR
                     SRFRLLGLPREEFPAFPAVKFDGGWKAPARDLQKLIGHVAFAASTEESRPILNGVLWE
                     LRPERMRMVATNGHRLARMDVPTPPAGSSAQADLIVPPKALEQIRRLFGADDVVEIAR
                     SENHLGFRSAGTQIFTRLIEGPYPNYEQVIPRENDKSATADKAAFTSALRRMSIVASD
                     QTHRIRMAFANGTCKLSVQTPDLGEAQEELTVSYDGDPLEIGFNASYLLEILKFIPTD
                     EIRMTFKAPERAATCEPVGWNDPASYLTLVMPLRLVD"
BASE COUNT          420 a          795 c          793 g          341 t
ORIGIN      
        1 ccgcggccca cgcggtggcc gaggcgcccg gaaagctcta caacccgctc ttcatttacg
       61 gcgccaccgg cctgggcaag acccacctga tgcaggcgat cgcccacacc gtctgcgagc
      121 gccagccgga cacccgggtg ctctacgtcg gcgccgagca gttcatcaac gaggtcatcg
      181 agagcatcca cagccggacc atgcccgagt tccggcgccg ctaccgcatg gacgtggacc
      241 tcttcctggt ggacgacgtg catttcctgg agggcaagga gatgacccag gaggagttct
      301 tccacacctt caacgccctc tacgagggca acaagcagat cgtcctgacc tccgaccggc
      361 cgcccaagga gatccccggc ctcgaggccc ggctggtgag ccggttcgag tggggcatgg
      421 tggccgacat cggccagccc gacctggagc accgcatcgc catcctccgg aagaagcagg
      481 agcaggacca cctggagatg acgatcccgg acgacgtgct gcgcttcatc gcggagcacg
      541 tccggtccaa cgtgcgcgag ctggagggct gcatcatcaa gctgctgctc ttcgcctccc
      601 tcaagcacaa ggaagtgtcg atcgagctgg cccgggaggc gctctcggac cggatccggc
      661 ccggcgagga cggcccggcg ccgcgggcgc ggccctcgat caacaaggtc caggaagtgg
      721 tggcgcggcg ctggggcgtc accccggagg ggctccggtc gaaggcccgc atcaagaccc
      781 tcaccgtgcc gcgccagatc gccatgtatc tcgcgcgcga gctgctggag atgcagctgg
      841 tggagatcgg gcaggcgttc ggcggccgcg atcactcgac ggtgatccac agcgtggaca
      901 aggtgagccg gcagatgacg cgggaccgca gcttccgcga gcgggtggag cacgcgcggc
      961 aggagttgtc cgcagaataa tccccgcgtg cgcgcgcgag ctgtgggaac tctggaacgc
     1021 ggtgaagaac ccggggcggc cgtccccatc gcacacaggg tctcgacatg gtcacgaagg
     1081 cgtaaccatc catgacggga agcgttgcgg gggcggccca catttccaga gcctctacta
     1141 ctgctgctag ttctatatat atggtaaagc agtattgctt atagcctccg aaggagtggc
     1201 atgaagctca cgatcacgcg ggagcagctg caggagggac tggtggcggt ggccgccgcg
     1261 gtgccggcca agaccaccct gcccatcctg tcgaacatcc tcctcgaggc cacgaaggac
     1321 gggatccgtc tctcgggcac ggatctcgac atctcggtga gcaccacggc gcccgcgcag
     1381 gtggaccagg agggagcgat caccctgccg gcccgcaagc tggtcgagat cgtccgcgag
     1441 ctgcccagcg cggcgatccg gctcaccggg gccggcgagc agcgcgtgac catcgagtgt
     1501 ggccgctcca ggttccggct gctcgggctg ccacgcgagg agtttcccgc ctttccggcg
     1561 gtcaagttcg acggcgggtg gaaggccccc gccagggacc tccagaagct catcggtcac
     1621 gtggccttcg ccgcgagtac cgaggagagc cggccgatcc tgaacggcgt gctctgggag
     1681 cttcggcccg agcgcatgcg catggtggcc accaacggcc atcggctggc gcgcatggac
     1741 gtgcccacgc cgcccgccgg cagctccgcc caggccgacc tcatcgtgcc ccccaaggcg
     1801 ctggagcaga tccgccggct cttcggcgcc gacgacgtcg tggagatcgc ccggagcgag
     1861 aaccacctgg gctttcgctc cgccgggacc cagatcttca cccggctcat cgagggcccg
     1921 taccccaact acgagcaggt gattccgcgg gagaacgaca agtccgccac cgcggacaag
     1981 gccgccttca cctccgcgct ccgccgcatg agcatcgtgg cgagcgacca gacccaccgg
     2041 atccggatgg ctttcgccaa cgggacctgc aagctctcgg tgcagacgcc cgacctgggc
     2101 gaggcccagg aggagctgac ggtgagctac gacggggacc cgctggagat cgggttcaac
     2161 gcctcctacc tgctggagat cctgaagttc atccccacgg acgagatccg gatgaccttc
     2221 aaggctcctg aacgtgcggc cacctgcgag ccggtaggct ggaacgaccc ggcgagctat
     2281 ctgacgctgg tgatgccgct gcggttggtg gactagggga gggaggagat cgagtaggtg
     2341 ccggactgc
//
LOCUS       DASUYN010000311         2605 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1646465, whole genome shotgun sequence.
ACCESSION   DASUYN010000311 DASUYN010000000
VERSION     DASUYN010000311.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2605)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2605
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1646465"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(136..663)
                     /gene="lspA"
                     /locus_tag="VF061_06105"
     CDS             complement(136..663)
                     /gene="lspA"
                     /locus_tag="VF061_06105"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: protein motif:HMM:TIGR00077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HEX6669110.1"
                     /translation="MGSVAEPTAGPERWIFWAAAGLVVVLDLITKVIAEATLLRTPGI
                     AVLGDWFQLRLVYNQGAAFGLHLGPYSRWIFLTVAIVAVFVLRRMSQTSPPGDLFRQL
                     ALGLVAGGAAGNLIDRIRSERGVVDFLDVGVGALRWPTFNVADIAVSCGAIALVISMW
                     REDSRRAEPESASAA"
     gene            complement(647..1030)
                     /locus_tag="VF061_06110"
     CDS             complement(647..1030)
                     /locus_tag="VF061_06110"
                     /inference="COORDINATES: protein motif:HMM:NF013427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TraR/DksA C4-type zinc finger protein"
                     /protein_id="HEX6669111.1"
                     /translation="MNKKQLSHLEKRLLEERARVMKELGYYDESFNATLQSSDGDLSS
                     YSFHMADQGTDAMEREKQFLFASQEGRYLWHVNEALRRLYGTPDKFGHCHQCGQEINF
                     ERLDALPHARLCITCKEKEEDGKRR"
     gene            complement(1030..>2605)
                     /locus_tag="VF061_06115"
     CDS             complement(1030..>2605)
                     /locus_tag="VF061_06115"
                     /inference="COORDINATES: protein motif:HMM:NF039585.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF5915 domain-containing protein"
                     /protein_id="HEX6669112.1"
                     /translation="MPYAQWHYPFEHEPEFTTHFPADFICEGLDQTRGWFYSLLAIAA
                     GVFDSPAYRNVIVNGLVLDAEGQKMSKTRGNVVDPGEMIGRFGADTVRLYLLASSQVW
                     LPKRFDQEAMGEVARGFMNQLRNTYKFFADYAGDWAPAASPPPGQRPLVDRWLLSRLD
                     ATVAAVRGAWESYDPTAGVRTLIGFVDELSNWYVRVNRPRFWAVDAEADPAALATLHE
                     ALVAVSRMLAPAAPFLSDWLHRALVGTSVHLARFPESSGARDESLEAAMEAVRRLASL
                     ARAAREERGLRVRQPLARMQVAVPPAARVAALEELLELLRTEVNVKAVDVVASDTQLV
                     RLRARANFRSLGKRYGKRTPTVAAAAARLTADQLRGLERGEPAELDVDGEPATFFPED
                     VVVERDVASDWLVASEGPYVAALDPRLDEGLRQEGLAREVVNRVQRLRKEAGYVYTDR
                     IGLWIAGDGPVLEAVRGHAAFIQGETLARRLELGRRAPAPDLEQEVEIEGHGVMVGVQ
                     RHLDGQNGAGPQPRDG"
BASE COUNT          387 a          940 c          897 g          381 t
ORIGIN      
        1 tgccatcgat ggtgaccgcc ttgtcggcga ccaatcgggc ggcctgggtg cgggagagac
       61 cgagctggtc ggcgaggaac cggtcgagcc gctcggtttc ggcggcgagg atgctgaact
      121 cgaccggccc cgggctcacg ccgcggaggc ggactccggc tccgcgcgtc gggaatcctc
      181 ccgccacatc gagattacca gggcgatggc gccgcagctg acggcgatgt cggccacgtt
      241 gaacgtgggc cagcggagcg cgccgacgcc gacgtcgagg aagtccacca cgccccgctc
      301 gctccggatg cggtcgatca ggttgccggc ggccccgccc gcgaccaggc cgagcgccag
      361 ttgccggaac aggtctcccg gcggactggt ctgggacatc cggcggagca cgaacacggc
      421 cacgatcgcc accgtgagga agatccagcg cgagtagggc cccaggtgca gcccgaacgc
      481 ggcgccctgg ttgtagacca ggcgaagctg gaaccagtcg cccagcaccg cgatccccgg
      541 tgtgcgcagg agagtggcct cggcgatgac cttggtgatc aggtcgagga ccaccaccag
      601 cccggccgcc gcccagaaga tccagcgctc ggggccggcc gtgggctcag cgacgcttcc
      661 catcttcctc tttctccttg caggtgatgc acagccgcgc gtgcgggagc gcatcgaggc
      721 gctcgaagtt gatctcctgc ccgcactggt ggcagtgacc gaacttgtcc ggcgtgccgt
      781 agaggcggcg gagcgcctcg ttcacgtgcc agaggtagcg gccttcctgc gaggcgaaga
      841 ggaattgctt ctcccgctcc atggcgtcgg tgccctggtc ggccatgtgg aaggagtagg
      901 acgacaggtc gccgtcggag gactgcagcg tggcgttgaa ggactcgtcg tagtagccca
      961 attccttcat gacccgcgcc cgctcttcga ggagtcgctt ctcgaggtgc gacagttgct
     1021 tcttgttcat tacccgtccc tgggttgcgg accggccccg ttctggccgt ccaggtgtcg
     1081 ttgcactcct accatcactc cgtgtccctc gatctcgact tcctgctcga ggtcgggcgc
     1141 cggcgcccgc cggccgagct ccagccggcg ggcgagcgtc tcgccctgga tgaacgccgc
     1201 gtggccgcgg accgcctcca gcaccgggcc gtccccggcg atccagaggc cgatccgatc
     1261 ggtgtagacg tacccggcct ccttccgcag ccgctgcacc cggttcacca cctcgcgggc
     1321 gagcccttcc tggcggagcc cctcgtccag cctggggtcg agggcagcca cgtagggccc
     1381 ctcgctcgcc accagccagt cgctcgccac gtcgcgctcc accaccacgt cctccgggaa
     1441 gaaggtcgcg ggctcgccgt cgacgtcgag ctcggccggc tctccccgct ccaggccccg
     1501 gagctgatcg gcggtgagcc gcgccgcggc ggcggcgacc gtaggcgtcc gtttgccgta
     1561 acgcttgccg agggagcgga agttggcccg ggcgcggagc cggaccagct gggtgtcgga
     1621 ggcgaccacg tccaccgcct tgacgttcac ctcggtgcgc agcagctcca gcaactcctc
     1681 cagcgcggcg acgcgcgcgg ccgggggcac cgccacctgc atgcgggcga gaggctggcg
     1741 gacccggagg ccccgctcct cccgggcggc gcgcgccagc gacgcgaggc gccgcaccgc
     1801 ttccatggcc gcctcgagcg actcgtcccg cgcgccggag gattccggga accgggcgag
     1861 atgcacggaa gttcccacca gggcccggtg gagccagtcg ctgaggaacg gcgcggccgg
     1921 cgccagcatc cgggacaccg ccaccagcgc ctcgtgcagc gtggccaggg ccgcgggatc
     1981 cgcttccgca tcgaccgccc agaagcgcgg ccggttcacc cgcacgtacc agttggacag
     2041 ctcgtccacg aagccgatca gcgtgcgcac gccggcagtc ggatcgtagc tctcccacgc
     2101 cccgcgcacc gcggccaccg tggcgtcgag ccggctcagc agccagcggt ccaccagcgg
     2161 gcgctgccca ggcggggggg acgccgcggg ggcccagtct cccgcgtaat cggcgaagaa
     2221 cttgtaggtg ttccgcagct ggttcatgaa gccgcgcgcc acctcgccca tggcttcctg
     2281 gtcgaagcgc ttgggcagcc acacctggct cgaggccagc aggtagaggc gcacggtgtc
     2341 ggccccgaac cggccgatca tctcccccgg gtccaccacg ttcccgcggg tcttggacat
     2401 cttctgccct tcggcatcga gcacgagacc gttcacgatc acgttccggt acgccggact
     2461 gtcgaagacg ccggccgcga tcgcgagaag cgagtagaac caccctcgag tctggtccag
     2521 gccctcgcag atgaagtcgg ccggaaaatg ggtggtgaac tccggttcgt gctcgaaggg
     2581 gtagtgccat tgcgcatagg gcatc
//
LOCUS       DASUYN010000312         4134 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_545031, whole genome shotgun sequence.
ACCESSION   DASUYN010000312 DASUYN010000000
VERSION     DASUYN010000312.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4134)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4134)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4134
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_545031"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1377)
                     /gene="sufB"
                     /locus_tag="VF061_06120"
     CDS             complement(<1..1377)
                     /gene="sufB"
                     /locus_tag="VF061_06120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HEX6669113.1"
                     /translation="MSTPVETLVNQAYKHGWVTDIESDVAPKGLSEDIVRLISAKKRE
                     PDWLLDWRLKAYRGWLRMTEPHSWPNIKYTPVDYQSISYYSAPRTKQPLGSLEEADPK
                     LLETYAKLGIPLSEQKILAGVAVDAIFDSVSVGTTYKAKLAEQGIIFCSFGEAVQEHP
                     ELVRKYLGSVVPSSDNFFAALNAAVFSDGSFVYVPKGVRCPMELSTYFRINTAETGQF
                     ERTLIVADEGAHVSYLEGCTAPKRDENQLHAAVVELVALEGATIKYSTVQNWYAGDEK
                     GKGGIYNFVTKRGKCVGARSKISWTQVETGSAITWKYPSVILQGDESVGEFYSVAVVN
                     SHQQADTGTKMIHIGKNTKSTIVSKGISAGHGQNTYRGAVRILRGADGARNFSQCDSM
                     LIGDQCGAHTFPYIDVQNPTARMEHEATTSKIGEDQIFYCNQRGISTEDAVSMIVNGF
                     CKEVFRELP"
     gene            complement(1374..2192)
                     /locus_tag="VF061_06125"
     CDS             complement(1374..2192)
                     /locus_tag="VF061_06125"
                     /inference="COORDINATES: protein motif:HMM:NF019884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH domain-containing protein"
                     /protein_id="HEX6669114.1"
                     /translation="MICPLTHPFAKPTRVYPFAIYEFAPFLLFDLTIPTFLLNISVMN
                     GPLSVNESTLPAGHKGQRGALLTQLKRAQPLTARELGVRLGVSLNAVRHHLKELEAEG
                     LIVYRREHRGVGAPAFAYRLSPAGEELFPRRYGEALSAMLAAAVERNGREAAVGMLEA
                     YFGALAGRMRTELEGVPEAERLGALARVLSEEGYMAEASPQDGAASQGDAVLTEHNCP
                     IPAVAGRFPEICAAEARYLAEVLGAEVERTGHILRGCPACEYRVRFSRAAEERS"
     gene            2369..2941
                     /locus_tag="VF061_06130"
     CDS             2369..2941
                     /locus_tag="VF061_06130"
                     /inference="COORDINATES: protein motif:HMM:NF013492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HEX6669115.1"
                     /translation="MTIHRIRLLGDPILRARCEPITRPGSTAVRVIMDDLRETLRDWQ
                     SRFGSGRGISAPQIGAPVRMVYLEMDKPWPLINPEIVDIGNEDFEVWDDCFSFPNLLV
                     RVSRAYRIRVRYQDFKSQWHEVELEGDRAELLQHEIDHLDGVLAVDRPHGLDPFCLRE
                     EWHRLYGPSRQYGPPEPRDEEYVSPISEAL"
     gene            complement(2945..>4134)
                     /locus_tag="VF061_06135"
     CDS             complement(2945..>4134)
                     /locus_tag="VF061_06135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669116.1"
                     /translation="RLLANGRAAADTALARLGCRSPPRSGSGRELPRLIAGFTAGGTD
                     DSERLALDRMLGFGLSDTLDLERLRSRVRQLGVSDAYHSVWLGPHGAGDTVEFSLSLR
                     RAARRVVAIGLAYDNELGGRLWAGGVDRRLFGRTLEGSAAVFLDGFRKELSIGVRRKF
                     QLVRQVVDPTLTVRLATENVRQFDGDGDELEELETREGIGFLGVERVLPDGWEAALGL
                     QGHTWDEPGREDLSTLGVALRAVRASRVRGEVVRADAVWTGLYRRASMDAELLARFGV
                     VRFTPRVRLGWGDDLPIQLGFPLGGEAGFPGLHLGERRGNREAMLGLMFAAPVKGPLL
                     ARLELAGGRTANGGPLLGDDGWVGGVRAGFGADTPVGEVRFEYGYSTEDRGAVFVRLG
                     EWR"
BASE COUNT          651 a         1464 c         1352 g          667 t
ORIGIN      
        1 cggcagctcg cggaacacct ctttgcagaa gccgttcacg atcatggaga cggcgtcctc
       61 cgtcgagatg ccccgctggt tgcaatagaa gatctggtcc tcgccgatct tcgaggtggt
      121 cgcctcgtgc tccatgcggg cggtggggtt ctggacgtcg atgtacggga aggtgtgagc
      181 cccgcactgg tcgccgatca gcatggagtc gcactgcgag aagttgcgcg ccccgtcggc
      241 gccgcgcagg atgcgcaccg cgccgcggta ggtgttctgc ccgtgcccgg ccgagatgcc
      301 cttcgacacg atcgtgctct tggtgttctt gccgatgtgg atcatcttgg tgccggtgtc
      361 ggcctgctgg tggctgttca ccaccgcgac cgagtagaac tcgcccaccg actcgtcgcc
      421 ctggaggatg acgctgggat acttccaggt gatggccgag ccggtctcga cctgggtcca
      481 ggagatcttg gaccgcgccc ccacgcactt gccgcgcttg gtgacgaagt tgtagatccc
      541 gcccttgccc ttctcgtcgc cggcgtacca gttctgcacc gtggagtact tgatcgtggc
      601 gccctcgagc gccaccagct cgaccacggc ggcgtggagc tggttttcgt cccgcttcgg
      661 ggcggtgcag ccctcgaggt agctcacgtg ggctccctcg tccgccacga tcagggtccg
      721 ctcgaattgg cccgtctccg cggtgttgat ccggaagtag gtggagagct ccatcgggca
      781 gcgcacgccc ttggggacgt agacgaacga cccgtcgctg aacacggccg cgttgagcgc
      841 cgcgaagaag ttgtcgctgg acggcaccac gctgccgaga tacttccgca ccagctcggg
      901 gtgctcctgc accgcctcgc cgaaggagca gaagatgatc ccctgctcgg cgagcttcgc
      961 cttgtaggtg gtacccaccg agaccgagtc gaagatggca tccaccgcga cgcccgccag
     1021 gatcttctgc tccgagaggg gaatccccag ctttgcgtag gtctcgagca gcttgggatc
     1081 ggcctcctcc aggctgccga gcggctgctt ggtgcggggc gcggagtagt agctgatgga
     1141 ctggtagtcc accggcgtgt acttgatgtt cggccagctg tgcggctcgg tcatccggag
     1201 ccaaccgcgg taggccttga gacgccagtc gagcagccag tcgggctcgc gcttcttggc
     1261 cgagatcagc cggacgatgt cctcgctcag ccccttgggg gcgacgtcgg actcgatgtc
     1321 ggtgacccag ccgtgcttgt atgcctggtt gaccagcgtc tcgaccggcg tgctcatgac
     1381 ctctcctcgg cggctcggct gaaccgcact ctgtactcgc aggccgggca tcctctgagg
     1441 atgtgtccgg tgcgttccac ctcggcgccc agcacctccg ccagataccg agcctcggcc
     1501 gcgcagatct ccgggaaccg gccggcgacc gcaggaatcg ggcagttgtg ctccgtgagc
     1561 acggcatccc cctggctggc cgcgccgtcc tgagggctgg cctcggccat gtacccctcc
     1621 tccgagagga ctctggcgag ggcccccagc cgctccgcct ccgggacgcc ctccagctcg
     1681 gtgcgcatcc gccccgcgag cgcaccgaag tacgcctcca gcatgcccac cgccgcctcg
     1741 cgaccattcc gctccaccgc cgccgcgagc atcgccgaga gggcctcgcc gtagcggcgg
     1801 ggaaagagct cctcgccggc cggactcagg cgataggcga acgccggcgc cccgaccccg
     1861 cgatgctccc ggcgatagac gatcaacccc tccgcctcga gctccttgag gtggtgcctg
     1921 acggcgttca gcgagacccc caacctgacc cccagctccc gcgcggtgag tggctgcgct
     1981 cgcttgagct gagtcaagag ggccccgcgc tggcctttat ggcccgcggg cagggtggac
     2041 tcattgacgc tgaggggccc attcatgact gaaatgttaa gtaaaaaagt cgggattgtc
     2101 aaatcgaaca acagaaatgg tgcgaactca taaattgcga agggataaac ccttgtgggc
     2161 ttggcgaagg ggtgagtgag tgggcagatc atgagtctcg cggctatggt gcttaggggg
     2221 aggccgatcg agccaaaacg tagtagtatc gaatgctact agttcctcat gctcgcgccc
     2281 ctatccggac ggatctggcc cctcggcgtc ctgtttccca tatttgagga cgccaagagt
     2341 tccaactcca accgtggagt agccttccat gaccatccat cgcatccggc tcctgggaga
     2401 tccgattctc cgcgccaggt gcgagccgat cacgcggccc ggttccacgg cggtccgcgt
     2461 gatcatggac gacctccggg aaacattgcg ggactggcag tcgcggttcg gcagcgggcg
     2521 cgggatctcg gcgccgcaga tcggcgcgcc ggtccggatg gtctacctgg agatggacaa
     2581 gccctggcca ctgatcaatc ccgagatcgt ggacatcggg aacgaggact tcgaagtgtg
     2641 ggacgactgt ttctccttcc ccaatctcct ggtccgcgtc tcccgcgcct accggatccg
     2701 ggtgcgctac caggacttca agagccagtg gcacgaggtc gagctggagg gcgaccgggc
     2761 ggagctgctg cagcacgaga tcgaccatct cgacggcgtg ctcgccgtgg accgcccgca
     2821 cgggctcgac ccgttctgcc tccgcgagga gtggcaccgc ctgtacggcc ccagccgcca
     2881 gtacggtcct cccgagccgc gcgacgagga gtacgtctcg ccgatcagcg aagcgctcta
     2941 gccgctaccg ccactccccc aggcgcacga agacggcgcc gcgatcctcg gtgctgtagc
     3001 cgtactcgaa tcgcacctcg ccgaccgggg tgtcggcgcc gaagccggcg cgaaccccac
     3061 ccacccatcc gtcgtccccc aggagcggtc ccccgttcgc ggtccggccg ccggccagct
     3121 cgagccgcgc gaggagcggg cccttcaccg gcgcggcgaa catgagcccg agcatggcct
     3181 cacggttgcc ccggcgctct cccaggtgga ggccggggaa tccggcctca ccgcccaagg
     3241 ggaacccgag ctggatcggc aggtcgtccc cccagcccag ccgcacgcgc ggcgtgaacc
     3301 gcaccacgcc gaagcgggcc agcagctccg catccatgct ggcccgccga tagaggccgg
     3361 tccagaccgc gtcggcgcgg actacctctc cacggacccg gctggcgcgc acggcccgca
     3421 gggcgactcc cagggtggag agatcctccc gtccgggctc gtcccaggtg tgcccctgga
     3481 gaccgagcgc cgcctcccac ccgtccggca gcacgcgttc cacgccgagg aaaccgatcc
     3541 cctcgcgggt ctccagctcc tcgagctcgt cgccgtcccc gtcgaactgg cggacgttct
     3601 cggtggcgag ccgcacggtg agggtggggt cgaccacctg gcggaccagc tggaacttcc
     3661 ggcgcacgcc gatggagagc tccttccgga atccatccag gaagaccgcc gcgctccctt
     3721 cgagcgtccg gccgaagagc cggcggtcca cgcctcccgc ccacagccgc ccgcccagct
     3781 cgttgtcgta ggccagaccg atggcgacga cccggcgggc ggcacgacgc agggagagcg
     3841 agaactccac ggtgtcgccc gcgccgtgcg gtcccagcca gaccgagtga taggcgtcgg
     3901 agacgcccag ctgccgtacc ctcgatcgca aacgctccag gtccagggta tcgctcagcc
     3961 cgaagccgag catccggtcc agcgccaggc gctcggaatc gtccgtgccc ccggcggtga
     4021 atcccgcgat cagacgcgga agctcccgac cgctgccgct ccgcggcggg gagcggcagc
     4081 cgagccgcgc gagagcggta tccgcggcgg cacgcccgtt cgccagcagc cgcg
//
LOCUS       DASUYN010000313         2369 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_987417, whole genome shotgun sequence.
ACCESSION   DASUYN010000313 DASUYN010000000
VERSION     DASUYN010000313.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2369)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2369)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2369
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_987417"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..309
                     /locus_tag="VF061_06140"
     CDS             <1..309
                     /locus_tag="VF061_06140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669117.1"
                     /translation="RERMVSMTNHSRRRWGVGLVAGLVACGAVGAAPAQAQSVPIIVP
                     PISAVVVGIPPSIPSLVVGLPGDSGVTTRGGLTWSTTGRADVDVDVDIDRQHGQAAVR
                     "
     gene            complement(666..1109)
                     /locus_tag="VF061_06145"
     CDS             complement(666..1109)
                     /locus_tag="VF061_06145"
                     /inference="COORDINATES: protein motif:HMM:NF019886.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HEX6669118.1"
                     /translation="MQQAIDALPLNQRIVITLRDVEGLPAAEVYNALAISETSQRALL
                     HRARSKVSGQLEHQLEGGRVETATDGYLDCRQFVEIVSDYLEGALSEAERQRFDAHLE
                     SCEGCRRYLDQMRTTIRVVGTLNEEDLDPGAKEQLLQLIYARKRT"
     gene            complement(1527..2036)
                     /locus_tag="VF061_06150"
     CDS             complement(1527..2036)
                     /locus_tag="VF061_06150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669119.1"
                     /translation="MLLGFLALHAQPAALAQEATPEMEEVEGLTFEPVTFVTGVDLPS
                     PGDLFVARASLEPGVVVPIDAGDPSLGFLLVESGTITVQVEAPLTVTRGAGLGEAIAA
                     AETSGDFSALLESIAAGETVTLEAGDAAYIPANSAGEFRNDGQEPAVSLAFLVIPAEG
                     MSGEATPAP"
BASE COUNT          376 a          787 c          805 g          401 t
ORIGIN      
        1 agggaaagga tggtctccat gaccaatcac tcacgccggc gctggggcgt cggtctggtc
       61 gctggactgg tggcgtgcgg ggcggtcggc gccgctccgg cgcaggccca atcggtgccg
      121 atcatcgtcc cgccgatttc cgccgtcgtg gtcggcatcc cgcccagcat cccgtcgctg
      181 gtcgtgggtc tgcccggcga cagcggggtg accacccgcg gcgggttgac gtggtcgact
      241 accgggcgcg ccgatgtcga cgtcgacgtc gatatcgacc gccagcatgg tcaggccgca
      301 gtgcgctaag gtccgcgacc gcgtggaggt gtcatcccga ggaacgcacg tgcggcatct
      361 cgaccgcatg gcacgtccat tccggagcac cgagactctt cgcctgcggg ctcagaatga
      421 cacctgttct gtgtcggtgc gttaggcgct ctccaggggc gtatgcacgc gcgtacagcg
      481 tcctgggtga cgtgttccat ggcgtcgcgc ccggaggcat gcagcgggcc gaccatctgc
      541 tccggatgtg cttaccatcg tcctgcccct gaagtagggg tgttgctggg tatggtcgaa
      601 agtccgtcct gggccagcgg ccaggtgcgc ggcaccatcc gtcatgattg gggcgagcgc
      661 gaccgctagg tccgcttccg cgcatagatg agctggagga gctgctcctt ggcgccagga
      721 tccagatcct cctcgttcag cgtgccgacg acgcggatcg tggtgcgcat ctggtcgaga
      781 taccgccgac agccttcgca ggactcgagg tgggcgtcaa accgctgccg ctcggcttcc
      841 gacagcgcgc cttccagata atcgctgacg atctcgacga attgcctaca gtccaaatag
      901 ccgtcggtcg ccgtttccac tcgacccccc tccaattggt gttccaactg cccgctcacc
      961 ttcgagcgcg cgcggtgcag caaagcccgc tgagaggtct ccgagatcgc cagggcgtta
     1021 tagacctccg cggcgggcag gccctcgacg tcgcgcaacg tgatgacaat acgttgattc
     1081 aggggcaagg catcgatcgc ctgctgcacg agggtccgcg tctcgtggga gaggacccgc
     1141 tcctcggtgg caagccgctg aggacagcgc tgcggcggcg ggtctggttg atgccgccgg
     1201 agttgtagag cgcgccgttg ctggttggat ggcacgcgac ccgggaggca gccacaagag
     1261 ctcccgggtc gctacactat gcgggcgcgg atcgctgggt gtccatgccg aacggtgctc
     1321 atgggagccg tggccggggt cggtctagtg tcgaagcggg cccgacgccg gcgccgtggc
     1381 gatccgcgct accctctatt acaccgatcg ggcggtaatg gatcatctct ggctctgagc
     1441 ttcggctcaa ggccgcctca aaccgccggg aagaacgagg gccgcaggca attccggccc
     1501 tcgtttcgtc tctattcctg gcggcgctac ggcgctggag tcgcctcgcc cgacatcccc
     1561 tcggcaggga tgaccaaaaa ggccaggctc acggccggct cctgaccgtc gttgcggaac
     1621 tccccggcac tgttggccgg gatgtaggcg gcgtctccgg cctccagggt cacggtctct
     1681 cccgcggcga tcgattccaa tagggcgctg aaatcaccgc tggtctccgc ggcggcgatt
     1741 gcctcaccca gacccgcgcc gcgggtgacc gttagcggcg cctccacctg gaccgtgatc
     1801 gtcccggact ccacgagcag gaacccgagc gacgggtcac cggcatcgat cggaaccacc
     1861 actcccggtt cgagtgaggc gcgtgccaca aacaggtcgc caggactcgg cagatcgacg
     1921 cccgtgacga aggtcaccgg ctcgaaggtg agcccttcca cctcttccat ttccggtgtg
     1981 gcctcctggg cgagggcagc cggttgcgcg tgcagcgcga ggaacccgag cagcacgacg
     2041 gcaacgatgg agacgagcag accgaaacga cgcatggctg acctcctgat ggagcgactg
     2101 gacagccacc gacctggcgg cgtggtgcag ccttgcacgg accgttccag gggtgccggc
     2161 ttcgcctcag gggtgtcgcc tgcggctcag gggggtcgct tcgctcaagg gggtgaaagg
     2221 ggagaggaga acgacgaacg gtcaggtact gcgcctcgtc cttcttcccc cctgaggcgg
     2281 cgcagccgcc gccaccccct gaaggagcgt agcgagtggc tccccctgag ggcgcgcagc
     2341 gactggcacc tcctgagcgc agcgacacc
//
LOCUS       DASUYN010000314         6533 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_987595, whole genome shotgun sequence.
ACCESSION   DASUYN010000314 DASUYN010000000
VERSION     DASUYN010000314.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6533)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6533)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6533
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_987595"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..443)
                     /locus_tag="VF061_06155"
     CDS             complement(<1..443)
                     /locus_tag="VF061_06155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669120.1"
                     /translation="MARAYPFLIAIVPILYFAANNPDKYGMLDLIFLLAVTAGACGVV
                     YALAWLVARGRAAPGLPAFVALLYVAWFFGYRRAVGVLTGDPARAPHLLLVAVGLILS
                     VALIWWVRRREGLLAGLGRFLPVRAALMVGWSAVQMGRGGLRGED"
     gene            complement(452..1867)
                     /locus_tag="VF061_06160"
     CDS             complement(452..1867)
                     /locus_tag="VF061_06160"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX6669121.1"
                     /translation="MGAEALGASFRDPSGFVYTRDGALYRQVNRVFRQHYQAFLDSGL
                     YAELVEGRLLVPHREVSLELAASPDAAAVLQPERVEFISYPYEWSFGQLRDAALLTLE
                     LQERALARGLTLRDASAYNVQFVAGRPLFIDTLSFEPREPGAPWAGYRQFCEHFLVPL
                     ALMSRVDVRLSALLRSHLEGVPLDLGSRLLPRRTWLRPGLLFHVHLHAMAQRRYADRG
                     AGTVEGGGPSAAARRGVSPAAATGLVRSLRSAVESLQWRPAGTEWADYTQDNNYSAAA
                     ADSKREAVLDFLRGLGARTAWDLGANTGEYSRAARQIVPSVLAFDIDPAAVERNYRRI
                     RADNESGILPLLLDLTNPSPALGWAHRERLSLEQRGPADVLLALAVVHHLAIGHNLPL
                     ERVAGFLAKLGRSLVIEFVPKSDSQVRRLLRDRADIFPEYTREGFEAAFGAHFRIERA
                     VPVAESERTLYLMTALPWHDT"
     gene            complement(1849..1998)
                     /locus_tag="VF061_06165"
     CDS             complement(1849..1998)
                     /locus_tag="VF061_06165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669122.1"
                     /translation="MYIDPTAGSLVLQVLAAGALSAVAVFGRLREGLKQFFRSLLPRR
                     WAQKR"
     gene            complement(2099..3463)
                     /locus_tag="VF061_06170"
     CDS             complement(2099..3463)
                     /locus_tag="VF061_06170"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HEX6669123.1"
                     /translation="MPIATINPATGQTLRTFAPIDAGQLEAKLQCAAEAYQRHRRTAF
                     AERSRLMLKAAEILEAEKESLGRLMVTEMGKPLKAAIEEAAKSAWGCRYYAEHAEGFL
                     ADEEVKTTAARSYIKWQPIGPVLAIMPWNFPFWQVFRFAAPALMAGNVGLLKHASNVP
                     QCALAIEEIFRRAGFPEGVFQTLLIETEQVRGVIEDRRVAAVTLTGSNTAGSQVASTA
                     GKAIKKTVLELGGSDPFIVMPGADLESAIATAVKARIVNNGQSCIAAKRFIVHQSVAD
                     EFERGFVAGMAALTVGDPMDANTAVGPLATEGQLQTIADQVDRAVRAGAWVLTGGRKL
                     ERKGWFYPPTVLAGITPESPIFHEEVFGPVALVFRVSTIDEAIRLANDSPFGLGASVW
                     TRSDAERERLVAEIESGMVFVNAMVASDPRVPFGGVKESGYGRELSPLGIREFVNAKT
                     VWVA"
     gene            3757..4623
                     /locus_tag="VF061_06175"
     CDS             3757..4623
                     /locus_tag="VF061_06175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669124.1"
                     /translation="MSALRILLRESIDYAGLFPPAGLGMAQAVANYESYRTSPHSWAL
                     GRFVVPATRLEELDGVAGWRIAALLGADPAAELKAIGEFNCRHAAAGAGAAVVDVVEA
                     KAGTPEAAERLLADVPPYLQAYVEIPVAGDPAPFARAVAGRGGRLKVRTGGITAEAFP
                     ATADLVRFIREARRAEVPFKATAGLHHPLRAEYRLTYEPGSACGTMFGFLNLFLATAF
                     IAGGLGDADAERLLEERDPAAVRFDPAGVEWRGRRLELDALGRARESGIVSFGSCSFT
                     EPIGDLQSLGLL"
     gene            4630..5949
                     /gene="fahA"
                     /locus_tag="VF061_06180"
     CDS             4630..5949
                     /gene="fahA"
                     /locus_tag="VF061_06180"
                     /EC_number="3.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004334 - fumarylacetoacetase activity
                     [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006572 - tyrosine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetase"
                     /protein_id="HEX6669125.1"
                     /translation="MDHTHDPSLRSWVASAQGQGDFPIQNLPFGVFRRRGADQPARIG
                     VAIGDMILDLVTCHEERRFTGLAATAAAACTAPVLNPLMALGAGPRAELRRQVSELLA
                     ADSPAFREDPGIGERLLLPQRDAELLLPAAIGDYTDFYASVHHATSVGSMFRPDNPLL
                     PNYKWVPIGYHGRASSIVPSGTPVRRPSGQSRGPDAPTPSFGPSRSLDYEMELGFFIA
                     AGNALGEPVPIGRAEERIFGFCLVNDWSARDLQAWEYQPLGPFLAKNFATTVSPWVVT
                     PEALTPFRAPALARPAGDPAPLPYLDSRRNAEAGAIAVTVEVYLSSARMREAGMAPMR
                     LSRGSAADLYWTPAQLVAHHTSNGCDLRPGDLLATGTISGPTKESRGCLLELTWRGAE
                     PLTLPTGETRKFLEDGDEVIMRGYCEREGAVRIGFGECRGMVVPAST"
     gene            6138..>6533
                     /locus_tag="VF061_06185"
     CDS             6138..>6533
                     /locus_tag="VF061_06185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669126.1"
                     /translation="MNRKSFPLAAAVLALMAGCQDGTLEPRANGVSLGPAAVLGYSDW
                     SPAVNIELTSPGADASFNTPSLDGCPFISRDGKTFYMASTRPGGLGGIDIWVSVRAHL
                     GEPWGPPVNVGAPVNSEADDFCPTIDRDGH"
BASE COUNT          982 a         2322 c         2293 g          936 t
ORIGIN      
        1 atgtcctccc cccgaagccc gcctcgcccc atttgcacgg cggaccagcc caccatgagc
       61 gcggccctca ccgggaggaa gcggcccagc ccggcgagca ggccctcgcg ccggcgcacc
      121 caccagatca gggccacgga gaggatcagc cccaccgcca cgagcaggag atgcggcgcg
      181 cgggccgggt caccggtgag tacaccgacc gcgcgacgat acccgaagaa ccacgcgacg
      241 tagagcaggg ccacgaaggc cgggagtccc ggggcggcgc ggccacgggc cacgagccag
      301 gccagcgcgt acaccacgcc gcaggccccc gccgtgacgg cgaggaggaa gatcaggtcc
      361 agcatcccgt acttgtccgg attgttcgcg gcgaaataga ggatggggac gatcgcgatg
      421 aggaaggggt acgccctcgc cacccgaggg ctcacgtgtc gtgccagggg agcgcggtca
      481 tgaggtacag ggtgcgctcc gactccgcca ccggcaccgc gcgctcgatc cggaagtgag
      541 ccccgaaggc ggcctcgaac ccttcacggg tgtactcggg gaagatgtcg gcacggtcgc
      601 ggaggagccg gcggacctgg gagtcgctct tggggacgaa ctcgatgacc agactccggc
      661 ccagcttcgc gaggaagccg gcgacccgct ccagcgggag gttgtgcccg atggcgaggt
      721 gatggacgac cgcgagggcg agcagcacgt cggccggtcc ccgctgctcc agactcagcc
      781 gctcccggtg ggcccatccg agcgccggcg acgggttggt gaggtcgagc agcagcggca
      841 gaatgccgct ttcgttgtcg gccctgatcc ggcggtagtt ccgctccacc gcggcggggt
      901 cgatgtcgaa ggcgagcacg ctggggacga tctgccgggc cgcccggctg tactcacccg
      961 tgttggcgcc gaggtcccac gccgtgcgcg cgccgagacc ccgcagaaaa tccagcacgg
     1021 cctcgcgctt cgagtccgcg gcggcggcgg agtagttgtt gtcctgggta tagtcggccc
     1081 actcggtgcc agcgggcctc cactgcagcg actcgacggc gctccggagg cttcgcacca
     1141 gcccggtcgc ggcggccgga ctcacccccc tccgggcggc cgcgctcggc cctccacctt
     1201 ccaccgtgcc ggcgccccgg tcggcatacc gccgctgggc catcgcgtgc aggtggacgt
     1261 ggaacagcag cccgggacga agccaggttc tccggggcag cagccggctg cccaagtcga
     1321 gcgggactcc ctcgaggtgg gagcgcagca gtgccgagag ccggacgtcc acccggctca
     1381 tcagcgccag cggcaccagg aaatgctcgc agaactgccg gtagccggcc cagggggcgc
     1441 ccggctcacg gggctcgaac gagagggtgt cgatgaagag cggacgcccg gcaacgaact
     1501 gcacgttgta ggcgctcgcg tcccgcaggg tgagtccccg ggccagcgcg cgctcctgga
     1561 gctccagggt cagaagggcg gcgtcacgca gctgcccgaa ggaccactcg tacggatagg
     1621 agatgaactc cacccgctcg ggctggagga cggcggccgc atcaggcgag gccgccagct
     1681 ccagcgacac ctcgcggtgg ggcaccagca accggccttc cacgagctcg gcgtacagcc
     1741 ccgagtcgag gaaggcctga tagtgctgcc ggaagacgcg attgacctgg cggtaaagcg
     1801 ctccgtctct ggtgtagacg aatccgctgg ggtcgcggaa agacgcgcct agcgcttctg
     1861 cgcccatcgg cgcggcagca gcgagcggaa gaactgcttg aggccctcgc ggagccgacc
     1921 gaacacggcg acggcggaca gagcgcccgc ggcgagcacc tgaagcacga ggcttccggc
     1981 ggtaggatct atgtacatgt aacctcggca gttccagggt tgggccggcc cggcggaggt
     2041 caccggcatg tcaccagcga aggataaacc cgtcacggcc gaaagggtgt gcgccaggtc
     2101 acgcaaccca gaccgtcttg gcgttcacga actcccggat cccgaggggg ctcaactccc
     2161 ggccgtaacc cgattccttc acgcccccaa aggggacccg ggggtcggag gccaccatgg
     2221 cgttgacgaa caccatgccg gactcgatct cggccaccag ccgctcgcgc tccgcatcgc
     2281 tccgggtcca gacgctggcg cccaacccga acggcgagtc gttcgccagg cggatcgcct
     2341 cgtcgatcgt gctcaccctg aacaccagcg ccaccgggcc gaagacctcc tcgtggaaga
     2401 tcggggactc gggcgtgatc cccgcgagga ccgtcggcgg gtagaaccaa cccttccgtt
     2461 cgagcttccg gccgccggtg agcacccacg cccccgcccg gaccgcccgg tccacctgat
     2521 ccgcgatggt ttgaagctgt ccctcggtgg cgagcgggcc gacggcggtg ttggcgtcca
     2581 tcgggtcccc cacggtgagc gccgccatcc cggccacgaa cccgcgctcg aactcgtcgg
     2641 ccaccgactg gtggacgatg aaccgcttgg cggcgatgca ggactggccg ttgttgacga
     2701 tcctcgcctt caccgccgtc gcgatcgccg actcgagatc ggcccccggc atgacgatga
     2761 aggggtcgct gccgccgagc tcgagcacgg tcttcttgat cgccttcccc gccgtcgagg
     2821 ccacctggct gccggcggtg ttgctgcccg tgagggtgac cgcggcgacc cgccggtcct
     2881 cgatcacgcc gcgcacctgc tcggtctcga tcagcagggt ctggaagacg ccctcgggaa
     2941 agccggcccg gcggaagatc tcctcgatgg cgagggcgca ctggggcacg ttggaggcgt
     3001 gcttcagcaa cccgacgttg cccgccatca gcgccggggc ggcaaagcgg aacacctgcc
     3061 agaaggggaa gttccacggc atgatcgcca gcaccgggcc gatcggctgc cacttgatgt
     3121 agctccgcgc cgcggtggtc ttcacctcct cgtccgcgag aaagccctcg gcgtgctccg
     3181 cgtagtagcg gcagccccag gcgctcttgg cggcttcttc aatcgcggcc ttcaacggct
     3241 tccccatctc ggtcaccatc agccgtccga ggctctcctt ctcggcctcc aggatctcgg
     3301 cggccttgag catgagtcgg ctccgctcgg cgaaggcggt ccggcggtgg cgctggtacg
     3361 cctcggcggc gcactggagc ttcgcctcca gctgtccggc atcgatcggc gcgaaggtgc
     3421 ggagggtctg acccgtggcg gggttgatgg tggcgatggg catgggggaa agtaaggcgg
     3481 taaggcggta gggcggtaag gcggtagggc ggtagggcgg tagggcgaga cggcgggacg
     3541 gcgggacggc aggatggcag gatggcagga tggcaggatg gcaggacggc aggacggcgg
     3601 gatgtcagcc tgagcggagc gaaggcgacc atgcgggcat gggccccttc gttccgctca
     3661 gggtgacata ccttaccgcc ggaccgcccg accgccctac cgccttcccg ccttaccgcc
     3721 ttaccgcctt accaccctcc cgcctacaat tcccccatgt ccgccctccg catcctcctc
     3781 cgcgagagca tcgactacgc cggcctcttc ccgccggccg ggctcggcat ggcgcaggcg
     3841 gtcgcgaact acgagtccta ccgcaccagt ccgcactcgt gggcgctcgg ccggttcgtc
     3901 gtccccgcga cccggctgga agagctcgat ggggtggcgg gatggcgcat tgccgccctc
     3961 ctcggcgccg accccgccgc cgagctgaag gcgatcggag aattcaactg ccgccacgcc
     4021 gcggcagggg cgggcgcggc cgtggtggat gtcgtggagg ccaaggccgg gacacccgag
     4081 gctgccgagc ggctcctcgc cgacgtgcct ccataccttc aggcctacgt cgagatcccc
     4141 gtggccggcg atccggcgcc gtttgcccgc gcggtcgccg gccggggagg cagactcaag
     4201 gtccgcacgg gtggcatcac cgccgaggcg ttcccggcca ccgccgatct ggtgcgcttc
     4261 atccgcgagg cgcgccgggc ggaggtgccg ttcaaggcga cggccggcct gcaccacccg
     4321 ctccgcgccg agtaccgcct gacgtacgag cccggcagcg cctgcggcac catgttcggc
     4381 ttcctcaacc tcttcctcgc gaccgccttc atcgccggcg ggctcggcga cgccgacgcc
     4441 gagcggctgc tcgaggagcg cgacccggcc gcagtccgct tcgaccccgc cggggtcgag
     4501 tggcggggcc ggcggctgga gctcgatgcc ctcgggcgcg cgcgggagtc cggcatcgtc
     4561 tccttcggtt cctgctcctt cacggaaccg atcggcgacc tccagtcgct gggcctgctg
     4621 tagccgtccg tggaccacac ccacgatcct tcgctcaggt cctgggtcgc gtcggcccag
     4681 ggccagggtg actttcccat tcagaacctg ccgttcgggg tgttccgccg gcgcggcgcg
     4741 gaccagccgg cgcggatcgg tgtggccatc ggggacatga tcctcgatct cgtcacctgc
     4801 cacgaggagc gacggttcac cggactggcc gcaactgcgg cggcggcctg cacggccccg
     4861 gtcctgaacc cgctcatggc actgggcgcg gggccccgcg ccgagctgcg ccgccaggtg
     4921 agcgagctgc tggccgcgga ctcgccggcc ttccgggagg accccggcat cggcgagcgc
     4981 ctgttgctgc cccagcgtga tgccgagctc ctcctgcccg ccgcgatcgg cgactatacc
     5041 gacttctacg cctcggttca ccacgccacc agcgtgggga gcatgttccg gcccgacaat
     5101 ccgctgctgc ccaactacaa gtgggtgccg atcggttacc acgggcgggc gtcctccatc
     5161 gtgccgagcg gcacccccgt gcggcggccg tcgggtcaga gtcgcggacc cgatgcgccc
     5221 acgccaagct tcgggccgag tcgctcgctg gactacgaga tggagctggg attcttcatc
     5281 gcggccggca acgcgctggg cgagccggtg ccgatcggtc gggcggagga gcggatcttc
     5341 gggttctgtc tggtcaacga ctggtccgcc cgcgaccttc aggcctggga ataccagccc
     5401 ctgggaccat ttctggcgaa gaacttcgcg accacggtct cgccctgggt cgtgacgccg
     5461 gaggcattga cgcccttccg cgcgcccgcg ctggcgcgcc ccgccggcga tccggcgccg
     5521 ttgccttatc tcgattctcg gagaaatgcg gaggcgggcg cgatcgcggt gacggtggag
     5581 gtgtacctct cctcggcgcg gatgcgcgag gccggcatgg ccccgatgcg gctcagtcgc
     5641 ggcagcgcgg ccgatctcta ctggaccccg gcgcaactgg tggcgcacca caccagcaac
     5701 ggttgcgatc tccgacccgg cgacctcctc gccaccggca ccatctcggg gccgacgaag
     5761 gagtcgcgcg gctgcctgct ggagctgact tggcgcggcg ccgaaccgct gacgctgccc
     5821 accggagaga cccggaagtt cctcgaggac ggggacgagg tgatcatgcg ggggtactgc
     5881 gagcgggagg gggcggtgcg gatcgggttc ggggagtgcc gggggatggt ggtgccggcc
     5941 tcgacctgat ccggcggtgt accctggcgg gttctggggg cggctctgag gagccgcctc
     6001 ttcgttttcg ggggcctccc ggcgccgtcc gcgtgagccg tctcgccggc cgtttgtcgt
     6061 gaacagggat gcagccagtc gcacggcgac cggctcggtg ctcacggtca cggacatcaa
     6121 accgggagac tcctgcaatg aaccggaagt ccttccccct ggcggcggcg gtgctagccc
     6181 tgatggccgg ctgccaggac ggcacactgg agccgagggc caacggcgta tcgctcggcc
     6241 cggcagccgt cctcggatac tcggactggt cacccgccgt caacatcgag ctgacctcac
     6301 cgggcgctga cgcgtcgttc aacacgccca gcctcgacgg ctgccccttc atcagccgag
     6361 acggcaagac gttctacatg gcctccactc ggcccggcgg gttgggcggc atcgacatct
     6421 gggtatccgt tcgcgcccac ctgggcgagc cctggggccc gcccgtaaac gtcggcgcgc
     6481 cggtgaactc ggaggccgac gacttctgcc cgacaatcga tcgagacggc cac
//
LOCUS       DASUYN010000315         2418 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1208727, whole genome shotgun sequence.
ACCESSION   DASUYN010000315 DASUYN010000000
VERSION     DASUYN010000315.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2418)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2418)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2418
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1208727"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..625
                     /locus_tag="VF061_06190"
     CDS             <1..625
                     /locus_tag="VF061_06190"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX6669127.1"
                     /translation="IDLYQFHWPDVSGTAVEDSWAEMGRLVSEGKIRAAGVSNFDVSL
                     LERCAAVRPVDSLQPPFSLIRRRAAEAEIPWCAAHGTGVIVYSPMQSGLLTDRFTGQR
                     VGALSPDDWRRRSPEFLSPKLGRNLALRDGLRSIAERRGTSVAGMAIAWTLAWSGVTA
                     AIVGARTPEQVDGWIDAGSIELTRDDLDEIATLVRETGAGAGPSLPR"
     gene            631..1578
                     /locus_tag="VF061_06195"
     CDS             631..1578
                     /locus_tag="VF061_06195"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ring-cleaving dioxygenase"
                     /protein_id="HEX6669128.1"
                     /translation="MRIHHVTAIAREPQRNLDFYAGILGMRLVKLTVNYDDPGTYHFY
                     YGDELGRPGTLLTFFPWTGSRPGRQGVGQINGVGLAVPQGSLGYWLERLLTRGVKFEG
                     PTRRFGEQVLAFMDPDGLMLELVATPRVSGVDGWPDGPVPVEHAVRGVHGVTIWEDGD
                     AGSAAFLTGTMGYAIQAEEANRVRLESGSDGPGTVVELRRAPGFWRGTDGAGTVHHVA
                     FRAPDDAEQATRQRGLREMGVQVTDVRDRSYFRSIYFREPGGVLFEIATDGPGFTLDE
                     SPPELGTTLRLPPRLETLRERLEVALPPLRLPHAEAMGG"
     gene            1579..2232
                     /locus_tag="VF061_06200"
     CDS             1579..2232
                     /locus_tag="VF061_06200"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX6669129.1"
                     /translation="MAALDLGFIHRFLPGAPDQPVLLLLHGTGGDENDLLPLGEALVP
                     GAPRLSPRGKVLEHGMPRFFRRLAEGVFDLDDLRKRTHELADFVVAATAAYALGGRRP
                     VAVGFSNGANIAAAMLLLRPDVLGGALLIRPMVPLVPETLPDLGGVPVQINAGQADPL
                     VPPPQVEALAKLLADAGASVSLRWIPGGHGLTPLDVEMGKEWFGVSSLSRAEARRQL"
BASE COUNT          327 a          838 c          892 g          361 t
ORIGIN      
        1 catcgatctc taccagtttc actggcccga cgtgagcggc accgcggtcg aagactcctg
       61 ggccgagatg ggccgcctgg tgagcgaggg gaagattcgg gcggccggcg tctccaactt
      121 cgacgtctct ctgctggagc gctgcgcagc cgttcgaccc gtggattcgc tccagccgcc
      181 gttctccctg atccggcgcc gcgccgcgga ggcggagatc ccctggtgcg ccgcgcacgg
      241 caccggagtc atcgtctaca gtcccatgca gtcgggactg ctgaccgacc ggttcaccgg
      301 gcagcgggtg ggcgccctgt ccccggatga ctggcgccgg cgctcccccg agttcctctc
      361 cccgaagctt ggccgcaacc tggcgctgcg cgacggcctg cgttccatcg ccgagcgacg
      421 ggggaccagc gtcgcgggta tggcgatcgc ctggacgctg gcgtggagcg gcgtcaccgc
      481 cgccatcgtc ggcgcgcgaa cgccggagca ggtggacggc tggatcgacg cggggtccat
      541 cgagctcacc cgtgatgacc tggacgagat cgcgacgctg gtgcgggaga ccggtgccgg
      601 cgcgggtccg tcactgccca gataggtgat atgcgaatcc accatgtgac ggcgatcgcg
      661 cgcgagcccc agcggaacct cgatttctac gccgggatcc tgggcatgcg actggtgaag
      721 ctcaccgtca actacgacga ccccggcacc taccacttct actacggcga cgagctcggg
      781 cggccgggca cgctgctcac tttcttcccc tggaccggct cgcgcccggg ccggcaaggc
      841 gtggggcaga tcaacggagt cgggctggcc gtaccccagg gctcgctggg ctactggctc
      901 gagcggctgc tcacgcgcgg ggtgaagttc gagggcccca cgcgccggtt cggcgagcag
      961 gtgctggcgt tcatggaccc ggatggactg atgctcgagc tggtcgcgac accgcgcgtg
     1021 tccggggtgg acgggtggcc cgacgggccg gtgccggtcg agcacgcggt gcggggtgtg
     1081 cacggggtca cgatctggga agacggggac gccggctcgg cggccttcct caccggcacg
     1141 atgggctacg cgatccaggc ggaggaggcg aaccgggtcc ggctggaatc ggggagcgac
     1201 gggccgggca cggtcgtcga gctgcggcgg gcgccgggct tctggcgcgg gaccgacggc
     1261 gctggcacgg tgcaccacgt cgccttccgc gcgccggatg acgcggagca ggcgacgcgc
     1321 cagcggggcc tccgcgagat gggagtgcag gtgaccgacg tgcgggaccg cagctacttc
     1381 cgctccatct acttccgtga gcccggcggg gtgctgttcg agatcgccac cgacgggccg
     1441 ggcttcacgc tggacgaaag cccgcccgag ctgggaacca cactgcgact gccgccgcgg
     1501 ctcgagacct tgcgggagcg cctggaggtc gccctgccgc cgctccgcct gccgcacgcc
     1561 gaagcgatgg gaggctagat ggccgcgctc gatctcggct tcatccatcg gttccttccc
     1621 ggagccccgg accagccggt cctgctgctg ctgcacggca cgggagggga cgagaacgac
     1681 ctcctgccgc tcggcgaggc gctggtcccg ggtgcgccgc gcctgagccc caggggcaag
     1741 gtgctggagc acggcatgcc acgattcttc cggcgcctgg cggaaggggt gttcgacctc
     1801 gacgacctgc ggaagcggac ccacgagctg gccgatttcg tggtggccgc caccgcggcc
     1861 tacgccctgg gcgggcgccg gccggtggcc gtcgggttct cgaacggggc caacatcgcg
     1921 gccgcgatgc tcctgctccg ccccgacgtc ttgggcggcg cgctcctgat tcggcccatg
     1981 gtgccgctgg tgcccgagac gctgcccgac ctcggcggcg tgccggtgca gatcaacgcc
     2041 ggccaggccg atccgctggt gccgccgccc caggtcgagg cgctggccaa gctgctcgcg
     2101 gacgccggcg cgtcggtgag cctccgatgg atccccggcg gccatggtct cacgccgttg
     2161 gacgtggaga tgggaaagga gtggttcggt gtttcttctc tttcgcgtgc ggaggcgcgg
     2221 cggcaactgt aggcacatca ccgccatcga gcggattcct cggggtgctg gcgccgcccc
     2281 tgccaaccac acgccggccg cgccagcagg ggccggtgcg cacagacgag gggatatgtg
     2341 atgcttcctg ccgcccttga gcacgagcgc ctgctcattg cagagcgcct cctcagcgag
     2401 atcgagcgcc gtcacggc
//
LOCUS       DASUYN010000316         3098 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_987994, whole genome shotgun sequence.
ACCESSION   DASUYN010000316 DASUYN010000000
VERSION     DASUYN010000316.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3098)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3098)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3098
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_987994"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..732
                     /locus_tag="VF061_06205"
     CDS             <1..732
                     /locus_tag="VF061_06205"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sialidase family protein"
                     /protein_id="HEX6669130.1"
                     /translation="SRSTDGGATWEPNRPIYTEPTCPCCRTSVAVAGDGTIYVAWRAI
                     LPGDVRDVVVTRSSDGGSTWSEPVRARADDWVYPGCPHAGPSLEVDAGGDVHVAWWTG
                     KEGEAGVYYARSADGGKSFVAQPIATGRKARPAHVQLALSGSRVLVAWDDGLGDVPRV
                     LLRRSTDGGKSFSPEEALSEAGVAASYPVLALYGDSVAVAWSQTTAAEHQRKLASMID
                     MKDPKAVMPLPRVGQSEILMRTGAL"
     gene            799..1332
                     /gene="pyrR"
                     /locus_tag="VF061_06210"
     CDS             799..1332
                     /gene="pyrR"
                     /locus_tag="VF061_06210"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional pyr operon transcriptional
                     regulator/uracil phosphoribosyltransferase PyrR"
                     /protein_id="HEX6669131.1"
                     /translation="MPTRVPLMDDRALARTLARMATEIIERAQGTEGLVLVGIQRRGV
                     ELAARLRALIAQSEGVQVPWGKLDITLYRDDLQTVGPRPVVGETSLPDLDGRTVAIVD
                     DVLYTGRTVRAALDECSDFGRPRHILLCVLIDRGGRELPIQADIVGRKVTAGPGDRVD
                     VLVSELDGRDTVELVHP"
     gene            1329..2291
                     /locus_tag="VF061_06215"
     CDS             1329..2291
                     /locus_tag="VF061_06215"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004070 - aspartate carbamoyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0016597 - amino acid binding [Evidence
                     IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HEX6669132.1"
                     /translation="MSAPALGKDLVGLETLSREQIQLILDTAEPFKEVSERAIKKVPA
                     LRGKTIVNLFFEASTRTRISFEFAEKRLSADTVNVASAGSSVSKGETLVDTARNLEAM
                     RIDMVVIRHGASGAAQFLGQRIRSNVINAGDGKHEHPTQALLDMLTLRDRFKRLEGLK
                     VAICGDILHSRVARSNIWGLTRLGAQVGVCGPASLLPRNIHELGVTILPRIEDAIQWA
                     DALNVLRLQLERMQAGFLPSLREYNRVFGVTTERLSKAPRDLLILHPGPMNRGVEIDS
                     DVADGPHSVILPQVTNGVAVRMAVLYLLAGGSPDWAHPGGGGGD"
     gene            2293..>3098
                     /locus_tag="VF061_06220"
     CDS             2293..>3098
                     /locus_tag="VF061_06220"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004151 - dihydroorotase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HEX6669133.1"
                     /translation="MRPILIRGGRIIDPSRTTDEVADLFLADGKVQAAGRDLGHPDDA
                     LVLDAGGKVVAPGLIDLHVHLREPGQEDLETVATGAMAAAAGGFSAVCAMPNTDPVTD
                     NQAAVGFIVSQAQRAAKARVYPIGAVSLGQKGQQLAEFGELVGAGAVAVSDDGKPVAS
                     SHLMRTALEYARTFGIPVADHCEDPTLAAGGAMHEGLVSTRLGLKGIPAAAEEIMVAR
                     DILLAELTGGHVHLCHMSTRGSVELIRRAKEKGLRVTAEACPHHFTLTHEA"
BASE COUNT          457 a         1095 c         1111 g          435 t
ORIGIN      
        1 agccggtcca cggatggcgg cgccacctgg gagcccaacc gtccgatcta caccgagccc
       61 acctgcccct gctgccggac ctcggtcgcg gtggccggtg acggcacgat ctacgtggcc
      121 tggcgcgcga ttctgccggg cgacgtacgg gacgtggtgg tgacccgctc ctccgacggc
      181 ggaagcacct ggagcgagcc agtgcgggcg cgggccgacg actgggtcta tcccggctgc
      241 cctcacgccg gcccttcgct cgaggtggat gccggcgggg acgtgcacgt ggcctggtgg
      301 accggcaagg aaggcgaggc cggtgtgtac tacgcccggt cggccgacgg cgggaagagc
      361 ttcgtagccc agcccatcgc caccgggcgg aaggcccggc ctgcccacgt gcagctggcg
      421 ctctcgggct cccgggtact ggtggcgtgg gacgacggtc tcggcgacgt cccgcgggtg
      481 ctcctgcgcc gctccaccga tggcggaaag agcttcagtc cggaggaagc cctcagcgag
      541 gcgggggtag cggcgagcta tccggtactc gcgctgtacg gcgactcggt cgcggtggcc
      601 tggagccaga ccaccgctgc cgagcaccag aggaagctgg cgtccatgat cgacatgaag
      661 gaccccaagg cggtgatgcc gctgccgcgg gtggggcagt ccgagatcct gatgcgcacg
      721 ggggcgctct agggcgatta cgaatgcgcc tgccgcgccc ttccgccccc ctccccgccg
      781 cgctagcttc ccgccccgat gcccacccga gttcctctca tggacgaccg cgcgctggcc
      841 cgcacgctgg cgcgcatggc caccgagatc atcgagcgcg cgcaggggac cgaaggcctg
      901 gtgctggtcg gcatccagcg ccggggcgtc gagctcgcgg cgcgcctgcg ggcgctgatc
      961 gcgcagtcgg agggcgttca ggttccctgg ggcaagctcg acatcaccct ctaccgcgac
     1021 gacctccaga ccgtcggtcc gcgacccgtg gtgggcgaga ccagcctccc ggacctcgac
     1081 ggccggaccg tggcgatcgt ggacgacgtg ctctacaccg ggcgcaccgt gcgcgccgcg
     1141 ctggacgagt gctccgactt cgggcggccg cgacacatcc tgctttgcgt cctgatcgac
     1201 cgcggcgggc gcgagctgcc gatccaggcc gacatcgtgg gccgcaaggt gaccgccgga
     1261 ccgggcgacc gggtggacgt gctggtatcg gagctggacg gacgcgatac cgtcgagctg
     1321 gtgcacccgt gagcgcgccg gcgctgggca aggacctggt cgggctggag accctcagcc
     1381 gcgagcagat tcagctcatc ctggacacgg ccgagccctt caaggaagtg agcgagcgcg
     1441 ccatcaagaa ggtgccggcg ctccgaggca agaccatcgt caacctcttc ttcgaggcct
     1501 cgacccggac ccggatctcc ttcgagttcg ccgagaagcg gctcagcgcc gatacggtga
     1561 acgtggcgtc cgcgggcagc tcggtgagca agggcgagac cctggtggac accgcccgca
     1621 acctcgaagc catgcggatc gacatggtgg tgatccggca cggcgcctcg ggcgcggcgc
     1681 agttcctcgg ccagcgcatc cgctccaacg tcatcaacgc cggcgacggc aagcacgagc
     1741 acccgaccca ggcgctgctc gacatgctca ccctccgcga ccggttcaag cggctcgagg
     1801 ggctcaaggt cgcgatctgc ggcgacatcc tccatagccg ggtcgcccgc agcaacatct
     1861 gggggctcac ccggctgggc gcgcaggtcg gcgtctgcgg accggcttcg ctcctgcccc
     1921 gtaacatcca cgagctcggc gtcaccatcc tgccccggat cgaggacgcg atccagtggg
     1981 ccgacgcgct caacgtgctg cggctccagc tcgagcggat gcaggctggc ttcctgccct
     2041 cgctgcgcga gtacaaccgc gtgttcggcg tcaccaccga gcggctgtcg aaggccccca
     2101 gggacctgct gatcctgcac cccggaccca tgaaccgcgg agtggagatc gacagcgacg
     2161 tggccgacgg gccccacagc gtgatcctcc cgcaggtgac caacggcgtc gccgtgcgga
     2221 tggcggtgct ctacctgctc gcgggcggct cgcccgactg ggcgcatccc ggcggtgggg
     2281 gaggggactg acgtgcggcc gatcctgatc cgtggcggtc ggatcatcga cccctcccgc
     2341 accaccgacg aggtggccga tctttttctc gccgatggca aggtgcaggc cgccggtcgc
     2401 gatctgggcc atcccgacga cgcgctggtg ctggacgcgg gggggaaagt ggtcgcgccc
     2461 ggtctcatcg acctgcacgt gcacttgcgt gagccgggcc aggaggacct ggagaccgtg
     2521 gcgaccggtg cgatggcggc ggcggcgggc gggttctcgg ccgtctgcgc gatgcccaac
     2581 accgatcccg tcaccgacaa ccaggcggcc gtgggcttca tcgtgagtca ggcgcagcgg
     2641 gcggcgaagg cccgggtgta ccccatcggg gccgtgtcgt tggggcagaa gggacagcag
     2701 ctcgccgagt tcggcgagct ggtcggcgcc ggcgcggtgg ccgtcagcga cgacgggaag
     2761 ccggtcgcct cgagccacct catgcggacc gccctggagt atgcccggac cttcggcatc
     2821 ccggtcgccg accactgtga ggacccgacc ctggccgccg ggggcgccat gcacgaggga
     2881 ctggtgtcta cccgcctcgg tctcaagggc atcccggcgg ccgcggagga gatcatggtg
     2941 gcgcgcgaca ttctgctcgc ggagctcacc ggcgggcacg tgcacctctg ccatatgtcc
     3001 acccgcggct cggtggagct gatccggcgc gccaaggaga agggactgcg ggtgacggcc
     3061 gaggcctgcc cccatcactt caccctcacc cacgaggc
//
LOCUS       DASUYN010000317         2254 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1428308, whole genome shotgun sequence.
ACCESSION   DASUYN010000317 DASUYN010000000
VERSION     DASUYN010000317.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2254)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2254
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1428308"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..529
                     /locus_tag="VF061_06225"
     CDS             <1..529
                     /locus_tag="VF061_06225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX6669134.1"
                     /translation="AAKSALAFVPDEPHLFEYLTVEEHLRFIARLYQVTDVDARLPGV
                     LRELELEDRRGSLPEELSRGMKQKLAIACALIHSPRALLLDEPLTGLDPVGIRRMKAT
                     IVDHARSGAAVILSSHLLHLVEEICSRVLIMRLGQVLAFGTIGDIVAARPELAGLKLE
                     DVFLGLIGHSGVEEA"
     gene            526..2229
                     /locus_tag="VF061_06230"
     CDS             526..2229
                     /locus_tag="VF061_06230"
                     /inference="COORDINATES: protein motif:HMM:NF028272.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative ABC exporter domain-containing protein"
                     /protein_id="HEX6669135.1"
                     /translation="MRSALGYLAVRSARNRVARQVRRLRNPRYVVALLLGIAYLWAVG
                     VRQRPSSGPPDVSPGIVELLAAVGVTLILAYTWLFGSDRRALAFSRAEVTWLFPAPVT
                     RTQLIRYKLLRGQFVVLFNVLLWTFLLSRDAAGPPWRRAAAIWVLLTTLALHRLGAAL
                     LRTSLWEHGLAAVRARSVTLTVLTIAVAVALADAARALPALRQAWDLGLGEFLRAASE
                     AAARPIPNVLLFPARVLVRPMLADGWAAWSLALLPALAILVAHYVWVIRSDAAFEETA
                     AAAALTRTRSRARRGSGLRYTVRPIPSLQPQGWPAGALLWKNLAAVLRAGRLRGAAIG
                     LAVGGLVLLVLAMSGGSATLLELIGWITAMWAGLLFVLGPQWIRNDLRADLARLATLR
                     SYPLRGAAVVGAEAAGSTAVLTALQLGLMGLAWLAFWGGEVYDPSPGLRTAVLLGALV
                     LLPGINFLAMLIQNGAVILLPGWMNPGPDRPIGVEALGHNMLIMSAFLVVLAALLVAP
                     ALAAASAFIGLRFLGWWAAAPAALAALLVMALEARLLLARLGRVFEATDPSTVPAAEL
                     L"
BASE COUNT          246 a          800 c          821 g          387 t
ORIGIN      
        1 ggctgccaag tcggcgctcg cgttcgtgcc ggacgagccc cacctcttcg agtatctcac
       61 ggtggaggag catctccgct tcatcgcccg gctctatcag gtgaccgacg tggacgctcg
      121 gctgcccggc gtgctgcggg agctggagct ggaggatcgg cgggggtcgc tgccggagga
      181 gctctcccgg ggcatgaagc agaagctggc catcgcctgc gcgctgatcc actctccgag
      241 agcgctcctg ctggacgagc cgctcaccgg gctggacccg gtgggcatcc gacggatgaa
      301 ggcgacgatc gtggatcacg cgcgctcggg ggccgccgtg atcctcagct cccacctgct
      361 gcacctggtc gaggagatct gcagccgggt gttgatcatg cggctcggcc aggtgctcgc
      421 gttcggtacc atcggcgata tcgtggccgc gcgaccggag cttgccggcc tcaagctgga
      481 agacgtcttc ctcggtctga tcggtcactc aggcgtcgag gaggcatgag gagcgccctg
      541 gggtacctcg ccgttcgctc ggcgcgcaac cgcgtcgcgc gccaggtgcg gcgcctgagg
      601 aatccgcgct acgtcgtcgc cctgctgctc gggatcgcct atctgtgggc ggtcggcgtg
      661 cgacagcggc cttcctcggg ccccccggac gtcagtcccg ggatcgtgga gctcctcgca
      721 gccgtcgggg tgacactgat cctggcctac acctggctct tcggctcgga ccgccgggcg
      781 ctcgccttct cccgcgcaga ggtgacctgg ctcttccccg cgccggtcac caggacccag
      841 ctgatccgct acaagctgct ccggggtcag ttcgtggtgc tcttcaacgt cctgctctgg
      901 accttcctgc tctcgaggga tgcggccggc ccgccctggc gccgcgccgc ggcgatctgg
      961 gtcctgttga ccacgctcgc cctccaccgg ctcggcgccg ccctcctccg gaccagcctg
     1021 tgggaacacg gattagcggc ggtgcgggcc cggtcggtca ccctgacggt cctgaccatc
     1081 gcggtcgcgg tcgcgctggc cgacgcggcc cgggcgctgc cggcgctgcg gcaggcctgg
     1141 gacctgggac tgggggagtt cctcagggcg gcgagtgagg ctgccgcgag accgatcccc
     1201 aacgtgctgc tcttccccgc ccgggtgctg gtccgcccga tgctggccga cggctgggcc
     1261 gcctggagtc tcgcgctgct gccggcgctc gcgattctcg tcgcccacta cgtgtgggtg
     1321 atccgctcgg acgccgcctt cgaagagacc gccgccgcgg ccgcgctcac ccgcaccagg
     1381 tcgcgggcgc gaaggggcag cgggctccgg tacaccgtcc ggcccattcc gagcctgcag
     1441 ccccagggct ggcccgccgg ggcactgctg tggaagaatc tcgcggccgt cctgcgcgcg
     1501 ggccggctcc gcggggcggc catcggtctc gcggtgggag gactcgtcct gctggtgctg
     1561 gcgatgagtg gggggagcgc gacgctgctc gagctcatcg gatggatcac cgcgatgtgg
     1621 gcgggcctgc tgttcgtcct cggaccacag tggatacgga acgatctgcg ggccgacctc
     1681 gcgcgcctgg ccacgctgcg cagctacccg ctccgcggcg ccgccgtggt cggcgcggag
     1741 gcggccggct cgaccgccgt cctcacggcg ctgcagctcg gcctgatggg actggcctgg
     1801 ctcgcgttct ggggcggtga ggtgtacgac ccttcacccg ggctgcggac ggccgtgctg
     1861 ctcggcgcgc tggtgctgtt gccgggcatc aacttcctcg cgatgctgat tcagaacggc
     1921 gccgtgattc tgctgcccgg ctggatgaac ccgggaccgg accggcccat cggcgtcgaa
     1981 gcgctgggcc acaacatgct gatcatgtcg gccttcctgg tggtgctggc ggcgcttctc
     2041 gtcgctccgg cactggcggc ggcatcggcc ttcatcgggc tgaggttcct ggggtggtgg
     2101 gcggctgcgc cggctgcgct ggcggcgctt ctcgtgatgg cgctggaggc gcgcctgctg
     2161 ctcgcccggc tgggccgcgt gttcgaggcg accgacccgt ccaccgtgcc cgcggcggag
     2221 ctgctctagc ggctcacggt cgctcggctc gccg
//
LOCUS       DASUYN010000318         5464 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1428330, whole genome shotgun sequence.
ACCESSION   DASUYN010000318 DASUYN010000000
VERSION     DASUYN010000318.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5464)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5464)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5464
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1428330"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1614
                     /locus_tag="VF061_06235"
     CDS             <1..1614
                     /locus_tag="VF061_06235"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014425.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEX6669136.1"
                     /translation="GRIALTYPVFNQTWDEPAHVAAGMEWLSRGSYSYEPLHPPLARV
                     MVALGPYLDGLRSVGHESVWLEGNALLHGRRTYGRNLTLARLGVLPFFIMGALAVFLW
                     TRHLFGDPPALLATLLFTTLPPVLAHAGIATTDVAATGSLALALYCATRWLEKPSVRR
                     GLAFGVAAAIAVLSKLSALVFLPAALLVLVLFHRRATAGERRAASARLTAARAAYLSA
                     ILVVWAGYRFSVGPLVTEADIPLENRPEAQGRFGGLYRSAYALARAPVYPAPELFQGL
                     AMLRGKNRAGQKAYLLGEVRHDGWWYFFPVALAVKTPIPFLLLFGIGAAAALRRSGPA
                     RWLFLAPAAAAGALLLIALPSRINIGLRHVLPIYPLMAVMAGAGAVALWRWRAVQWIG
                     PVATALLLGWHLAAGLRVHPDYLAYFNEAAGGHPERILVDSDLDNGQDLWRLADTLRS
                     RGVEEVALAYAGSATVAEHGLPRIRWLEPHRPDTGWVAASLWSLKLGSLNQPGHDDFA
                     WLERHRPVALVGRSIRLYYVPPVRGDSLP"
     gene            complement(1578..3323)
                     /locus_tag="VF061_06240"
     CDS             complement(1578..3323)
                     /locus_tag="VF061_06240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669137.1"
                     /translation="MRLVATRHRCLLASAAIVVFALAVELARVISSDIGFLLYAAGRL
                     LDGARLYVDLIEINPPLIVALNVPVVLAARALGLPEVLVYRLAVAALLLACIGLTARA
                     LSRLSPAGEARSRWVLLLLTLALFLPPGADFGQREHLMLALITPYLVLAAARSANQPA
                     PRWEAAGIGALAGLGFALKPHFLLLLVGIEGYLMARRRKLAGLARPESLGAMAVLATY
                     GALVLLLTPDYVKMVRLLGGAYLRFLYDPFLHLLVTGRGVLLSWFAVLAWAALSKHLR
                     FRTLGEVLVVGVFGSLLAAAAQQKGLPYHFYPSLGLALVLLGVLVADAWGSVRGAAER
                     LYQVLAAAVLAMAVIGALVEGGLHLAGRARPGGEPELVALSRLVREKAAGQPIFIMSH
                     HIGSAFPLINYSGAVLGSRFHHLWILAGDYLDRMKSPEPLRYRAPEAMPASERFLNQA
                     VLADLERYRPRLLIVLRHARDHPGSGYRRFDYIRYFGRDPRFARILHHYQELETVGNY
                     VVYERVHASEPRTRPPPVVTPGTLDLRRRRGDVLGLGLLRLVILVLAVAALTAVQLAG
                     RSRGQGSESPRTGGT"
     gene            complement(3320..4132)
                     /locus_tag="VF061_06245"
     CDS             complement(3320..4132)
                     /locus_tag="VF061_06245"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dolichyl-phosphate beta-glucosyltransferase"
                     /protein_id="HEX6669138.1"
                     /translation="MRPEPDLSIVVPAFNEEDRLEPTLRSYLGYCRATARSVELIVVD
                     DGSVDGTSLVVEQLAGEFPELRLIRLAENRGKGFAVRSGVVNARGRTVLFADADGATP
                     ISELERLEAALRDRNDLAIGSRAIAARDVRVNAKVYRRIMGRVFHGMVETLTVRGVRD
                     TQCGFKLFSGPVAHDLFSRMRMSGFSFDVELLMMAQRRGYRIAEVPVNWTHQPGSKVN
                     LALDSIRMLRDLFVIRGRYFRGEYNAPHLSPRRSSQELTAPAEASFSTKHQI"
     gene            4270..5256
                     /locus_tag="VF061_06250"
     CDS             4270..5256
                     /locus_tag="VF061_06250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669139.1"
                     /translation="MTRPSLRARAAAALVAGALSGVFVIALYSRQAAGVVSDWDATWV
                     GARALLEGKSPYAAVQMPPWPWRINYPMPAILLSAPLALLPLWLARGVFVGVATAVFT
                     FVVTRRAWWPLYFVLSPAMLWSWIAVKWEPLMVAAALTPTLGWILTVKPTQGFALWSA
                     YPRREAVIGGLAILALSFAVYPPWVPEWIGSLAGTPHRPHLIRPLGFLLLLGLLRWRR
                     PEGRLLAVLCVIPQTTALYEVLALTLLVRTRMQAALFAALTLGAHLLYRLGPQGPWPV
                     GAEYQWWVMLALLYAPALALVLQRPNVGPIVPGKPPDFGGLQEPSDGRVREQ"
BASE COUNT          773 a         1918 c         1955 g          818 t
ORIGIN      
        1 ggtcgcatcg ctctgaccta cccggtcttc aaccagacct gggacgagcc ggcgcacgtc
       61 gccgccggca tggagtggct cagccggggg agctactcct atgagccgct ccatcctcct
      121 ctggcgcgcg tcatggtcgc cctgggtccg tatctcgacg gcctgcgatc ggtgggtcac
      181 gagagcgtgt ggctggaggg caacgcgctg ctccacggcc gccggacgta cggccggaat
      241 ctcacgctcg cgcgcctcgg tgtgctcccg ttcttcatca tgggcgcgct ggccgtcttt
      301 ctgtggacaa ggcacctgtt cggcgacccc ccagccctcc tggccacgct gctgttcacg
      361 acgctgccgc cggtgcttgc ccacgccggc atcgcgacga ccgacgtcgc ggccaccgga
      421 agcctcgcgc tcgcgctcta ctgcgccacg cggtggctgg agaagccttc cgtcaggcgc
      481 ggccttgcct tcggcgttgc cgccgcgatc gccgtgctct cgaagctctc ggcgctggtg
      541 ttccttcccg ccgcactcct ggtgctcgtc ctgttccacc gccgcgccac ggccggtgag
      601 cggagggcgg cttcggcccg gctcaccgcc gcccgggcgg cctacctctc cgccatcctc
      661 gtggtgtggg cgggataccg gttctcggtc ggccccctgg tcaccgaggc cgacattccg
      721 ctcgagaacc ggccggaagc gcagggccgc ttcggtgggc tctaccgctc cgcctacgcg
      781 ctcgcccggg cgccggtgta ccccgccccg gagctcttcc aggggctcgc gatgctgcgg
      841 gggaagaacc gggcgggcca gaaggcctac ctgctgggcg aagtgcgcca cgacggctgg
      901 tggtacttct tccccgtcgc gctcgcggtc aagacgccga tccccttcct cctgctgttc
      961 ggcatcggcg ccgcggccgc gctcagacgg tccgggccgg cccgatggct gttcctggct
     1021 cccgcggcgg ctgccggcgc gctgctgctg atcgcactgc ccagccgaat caacatcggt
     1081 ctccggcacg tgctgccgat ctatcccctc atggccgtca tggccggtgc cggcgcggtg
     1141 gcgctctggc gctggcgagc ggtccagtgg atcgggcccg tggccaccgc cttgctcctg
     1201 ggctggcacc tggcggcagg gctccgggtg cacccggatt acctcgccta cttcaacgag
     1261 gccgcggggg ggcaccccga gcgcattctg gtggacagcg atctggacaa cgggcaggat
     1321 ctctggcgcc ttgcggacac cctccgctcc cgcggggtcg aggaggtggc gcttgcctac
     1381 gcgggctcgg ccacggtggc ggagcacggg ctgccgagga tccgctggct ggagccgcac
     1441 cggcccgaca ccgggtgggt ggccgccagc ctctggtcgc tcaagctggg atcgctgaac
     1501 cagccggggc acgacgactt cgcctggctg gagcggcatc gaccggtggc gctggtgggg
     1561 cgttcgatcc ggctgtatta cgtcccaccc gtgcgcggag actcgctgcc ctgacctcgc
     1621 gagcggccgg cgagttggac cgccgtgagc gcggcgaccg ccaacacgag gatgaccagt
     1681 cgcaggagcc cgagccccag cacgtcccca cggcggcgcc gcaggtccag ggtgcccggc
     1741 gtaaccaccg gcggcgggcg cgttcggggc tccgaggcgt ggacccgttc gtacaccacg
     1801 tagttcccga cggtctccag ctcctgatag tgatggagga tcctcgcgaa tcgggggtcg
     1861 cgcccgaagt agcggatata gtcgaaccgg cgatagccgc tgccgggatg gtcgcgggca
     1921 tggcgcagca cgatcagcag ccgcggccgg tagcgctcca ggtccgcgag gacggcctgg
     1981 ttcaggaatc gctcgctggc gggcatggcc tccggcgcac ggtagcggag cggctccggc
     2041 gacttcatcc gatcgaggta atccccggcg aggatccaca ggtggtggaa cctcgatccc
     2101 aataccgccc cgctgtaatt gatcagcggg aaggccgatc cgatgtgatg ggacatgatg
     2161 aagatcggct gcccggcggc cttctcgcgc accagccggg acagcgcgac cagctcgggc
     2221 tcaccgcccg gccgtgctcg cccggccagg tgaaggccgc cttccacgag ggcaccgatc
     2281 accgccatcg cgaggacggc ggccgcgagc acctgataca gtcgctcggc ggctcccctc
     2341 acggagcccc aggcgtcggc gaccaggacg cccagcagca cgagggcgag gcccagcgac
     2401 gggtagaagt gataggggag acccttctgc tgggcggccg cggcgagcag ggagccgaag
     2461 acccccacca ccaggacctc gcccagggtc cggaacctga gatgcttcga cagggcagcc
     2521 caggccagca ccgcgaacca ggacaggagc actccccgtc cggtgaccag gaggtgcagg
     2581 aacggatcgt acaggaatcg caggtaggcg ccgccgagca gccgaaccat cttcacgtag
     2641 tccggcgtga ggagcagcac gagggcgccg tacgtcgcca ggaccgccat cgctccgagg
     2701 ctctccggac gcgcgagccc cgcgagcttc cggcggcggg ccatcaggta gccctcgatc
     2761 ccgaccagga gcaggaggaa gtgcggcttc agcgcgaagc caaggcctgc cagcgcgccg
     2821 atgccggctg cctcccaccg aggagccggc tggttcgcgg accgtgcggc ggcgagcacc
     2881 aggtaggggg tgatcagcgc cagcatcagg tgctcgcgct ggccgaaatc ggccccgggc
     2941 ggcaggaaga gagccagggt gagcagcagc agtacccagc ggctgcgcgc ctcgccggcc
     3001 ggggacaggc ggctcagggc gcgggccgtg agaccgatgc aggcgagcag gagcgcggcc
     3061 acggcgaggc ggtagaccag gacttccggc agcccgagcg ccctggcggc cagcacgacc
     3121 ggcacgttca aggcgacgat cagcggtgga ttgatctcga tgagatccac gtacagccgc
     3181 gcgccatcga gcagccggcc ggccgcatag aggagaaagc cgatgtccga ggagatcacc
     3241 cgggccagct cgacggcgag tgcgaagacg acgatggccg ccgatgcgag gagacagcgg
     3301 tggcgggtgg cgaccagcct caaatctggt gcttggtgga gaaggaggcc tcggcggggg
     3361 cggtcagctc ctggctcgag cgccgcgggc tcaggtgggg cgcgttgtac tccccgcgga
     3421 agtaccggcc gcggatcacg aacaggtccc ggagcatccg gatcgagtcc agcgccaggt
     3481 tcaccttgga gcccggctgg tgggtccagt tcaccggcac ttcggcgatc cggtagccgc
     3541 gacgctgcgc catcatcagc agctcgacgt cgaagctgaa cccgctcatc cgcatccggg
     3601 agaagaggtc atgggccacg gggccgctga agagcttgaa accgcactgg gtgtctctga
     3661 cgccacgcac ggtgagcgtc tccaccatgc cgtggaacac gcggcccatg atccgccgat
     3721 agaccttcgc gttcaccctg acgtcgcggg ccgcgatcgc ccgggagccg atcgcgaggt
     3781 cgttgcggtc gcgcagcgcc gcctccagtc gttcgagctc ggagatcggg gtggcgccgt
     3841 ccgcgtcggc gaacaggacc gtccgcccgc gagcgttcac cacgccgctc cgcaccgcga
     3901 accccttgcc ccggttctcg gccaggcgga tcaggcgaag ctcggggaac tcaccggcga
     3961 gctgctcgac cacgaggctg gtcccgtcca cactgccgtc gtccaccacg atgagctcga
     4021 ccgagcgagc ggtcgcgcgg caatagccca ggtagcttcg cagcgtgggc tcgagccggt
     4081 cctcttcgtt gaaggccggc acgacgatgg aaaggtcggg ctcgggtcgc atgtgtgggt
     4141 gcctgggggc aactcccatg ccgatggtag atcctggcgg aggccccgac agaggggccg
     4201 ggtgtggggg ggctgctaca ggctatggat tcggggggcg cggcgcaagg ccatacgatg
     4261 cacgacccgt tgactcgacc gagcctgcgc gcccgggctg ccgcggctct ggtcgcaggg
     4321 gcactctccg gcgtcttcgt catcgcgctg tactcgcggc aggcggcggg ggtcgtgagt
     4381 gactgggatg ccacctgggt cggcgcccgc gcgctgctgg aggggaagag cccctatgcc
     4441 gccgtgcaga tgccgccatg gccgtggcgg atcaattacc cgatgccggc gatcctgctg
     4501 tcggcgcccc tcgccctgct gccgctctgg ctcgcgcgag gcgtcttcgt cggtgtcgcg
     4561 accgcggtct ttacgttcgt cgtcacccgc cgcgcctggt ggccgctcta tttcgtgctg
     4621 agcccggcca tgctgtggag ctggatcgcg gtcaagtggg agccgctgat ggtcgcggcg
     4681 gcgctcacgc ccaccctcgg ctggatcctc accgtgaagc ccacccaggg ctttgcgctc
     4741 tggtccgcct acccgcggcg ggaggccgtg atcggcggcc tggccatcct cgcgctcagc
     4801 ttcgccgtgt atcccccgtg ggtgcccgag tggatcggct cgctggcggg cacgccccac
     4861 cggccccacc tgatccgtcc cctcgggttc ctgctgctgc tcgggctgct ccggtggcgg
     4921 cgccccgagg ggcgcctgct ggcggtgctg tgcgtgatcc cccagacgac cgcgctctac
     4981 gaagtcctcg cgctgacgct gctggtgcgg acgcggatgc aggccgccct gttcgcggcc
     5041 ctcaccctgg gggcgcatct cctctaccgg ctcgggcctc agggtccgtg gccggtgggg
     5101 gcggagtacc agtggtgggt gatgctcgcg ctactctacg cgccggccct cgccctggtg
     5161 cttcagcgtc cgaacgtcgg gccgatcgtt ccggggaagc cgcccgactt cggaggcctc
     5221 caggagccct cggatggtcg ggtccgcgag cagtgagtcc gcgaccagcc tgtggccggg
     5281 agcggtccag tgaacatcca ggggcatgaa atagcgtcgg aggacggaat cgggcggccc
     5341 ggcaccgatg aaccacggat gcaggtcgac gaggggcacc tggttgcgct ccgcccacga
     5401 ccgccagtag ccggtgttcg cgttctcgat ctcacgccgg acgacctgct cggcccgggg
     5461 gtag
//
LOCUS       DASUYN010000319         6532 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1209301, whole genome shotgun sequence.
ACCESSION   DASUYN010000319 DASUYN010000000
VERSION     DASUYN010000319.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6532
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1209301"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1280)
                     /locus_tag="VF061_06255"
     CDS             complement(<1..1280)
                     /locus_tag="VF061_06255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX6669140.1"
                     /translation="MTLPLQHPVVRPNPGGRKRPPDPPASWRQRLQALRHLPRLLRMV
                     WETEPRYVVGILVLRIARALVPLAVLWVGKLIVDEVVRAVGVVGAGGAVPWVLLAELL
                     ALELGIALVGEGLSRLSALLESLLGDLFANRTSVELMRHSATLDLEQFENAEIYDKLE
                     RARRQTVNRIGLFTLLLATIQDLITLATLSVALAVYVPWLLVLLAVAVLPSLLGETHF
                     ASLGYSLLYSWTPERRQLDYLRYIAASDVSAKELKLFGLSDFLVGRYDRLSQEFYQVN
                     KSLAVRRSLVSSLLAAVGTLGYYAAYAVIIYLTVIGHRSPAGVFTIGVLTFLAGSFRQ
                     SRDLIQRVLLSLSQIFEQSLYLDDLFSFLALEPGIRPVPGARPVPNPILRGFSFENVG
                     FRYPGAEQWAVRGLDFTLAPGERLALVGENGAGKT"
     gene            1306..2016
                     /locus_tag="VF061_06260"
     CDS             1306..2016
                     /locus_tag="VF061_06260"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX6669141.1"
                     /translation="MTPSTTALVTGATHGIGRATAFALGRAGYRVGVCARTGSKVAAL
                     VEELRAGGIQADGRAGDVAEPADAGAIVEHVVGALGEVGVLVNNAGVLIARPIGELTL
                     EDWDATMATNLRGLFLMTRAVLPAMRARRRGHLVNVASLSARNGFAGGAAYAASKHAV
                     LGFGRSLMLELRKEGIRVITICPGSVDTAMLRDQPMLKADPDRILQPDDVAETILHTL
                     RLPDRALVSEVDLRPTNP"
     gene            2023..2238
                     /locus_tag="VF061_06265"
     CDS             2023..2238
                     /locus_tag="VF061_06265"
                     /inference="COORDINATES: protein motif:HMM:NF016230.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX6669142.1"
                     /translation="MSGVSVSMCLCRGVSFAALLERARASGWDLDALMRETGCGAQCG
                     LCRPYLRRMLTTGETTFHELLWDRPSG"
     gene            2235..3797
                     /locus_tag="VF061_06270"
     CDS             2235..3797
                     /locus_tag="VF061_06270"
                     /inference="COORDINATES: protein motif:HMM:NF024883.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX6669143.1"
                     /translation="MSRSGWARINAIRLSVGIAIVAGWLGLYFAFRGHWLGILLPLLA
                     TGILFGAVRAGDRRARQQNADLRDALTSAATRNRELERLRGVAATLLAGSELSGLLQE
                     IADAAAELLQAEGGGVTLVVEEGRFVRIAAATGPLAKAKGALIPVDTSLLGTVVTTGT
                     PMVARDIEGDPRSYRIPGLEVSLRTAAIVPLRSAGVVIGTVSVYNHRDGRPFGDPDLQ
                     LLETLGDQVVVGLDRAAVLDEIRRSERTLAARNAELQRATRLKSEFLANMSHELRTPL
                     NAIIGFSDLMLTEGVGPVTAQQREFLEAILRNGRHLLELISGILDLSKIEAGRMSLSL
                     SPTDLREAITGAVADTESLRRAKRQSVWLELDDSPLHVVADGVRVRQVLFNLLSNASK
                     FTGEGGSIILSALSTRAPLAPPAERAGEERKLVTQDVVWVAVADTGIGIPPQEMSKLF
                     REFSQVDSTASRQAQGTGLGLALSKKLVELHGGTIGAESLPGRGSTFWFILPADGPVR
                     RNQPGVFSGSTA"
     gene            3847..4200
                     /locus_tag="VF061_06275"
     CDS             3847..4200
                     /locus_tag="VF061_06275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669144.1"
                     /translation="MRPTATRRLKALVLTAVLLIGGSGTSALDVALYHLGGNVEAPAA
                     VRIAGTDAPRPHGDACALLDWAARGPYTVALAALPAVAPGAEAGPAPTVRVQTPRPAD
                     LSFTSRPRAPPLQLT"
     gene            4286..6502
                     /locus_tag="VF061_06280"
     CDS             4286..6502
                     /locus_tag="VF061_06280"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX6669145.1"
                     /translation="MHPLIMAATLLAAAPTSASDTAPPPRTLSGRVSNPAGAPLYQAR
                     VTVPEANRSTTTDLEGHYVVAELPSGTYSVSFSAIGYAPQVHRVTLGDEDLTLDVELK
                     PSLVELPDLQVTAAPLATTSLTSPQPVSVLGGSDLEAGRSPTLGETVSALPGVRSFST
                     GSGVGKPVIRGLTSNRVLVLADGERVESQQWGDEHGPQVEAAEADRIEVIRGPASVLY
                     GSDAIGGVINVVSPPLPDGQGRRPFASGRAVASYSTNNEQPDGTLALEGASGPVGFRG
                     SLTGRTAGDVRTPAGELANSGLWTVHGSGTVGYRGGWGAVSATYVRRDERVEIHEDPA
                     EDPGATPFQRIGDDRVHLSGSIPVGASHLDIDLGAGRNRRREFEEEGAEEVALGLLSR
                     TWSADVRLHHAPVGRVAGIVGLSGLRNSLEKFGEETLIPENAYNNVGVYAFEQAELGL
                     WSLSLGARYDYRRLSVEDDSALGVEAQRRTYHSVTGNVGALYRVAEPVALVLNLGRGY
                     RAPTAYDLFANGVHEGTVRFERGDPTLENETSVNGDLAVRMQTSSVSAELGAFANYID
                     NFIFPDPTGEVDPESGLLIFDITQGNARLTGFEAAVEYHATQWLHLRSTADYTRGRNR
                     STETPLPFIPPFRVTYSVRLEGGDRGRFQQPYLSIGAESNARQTDLDPEDFAPDGYTL
                     VHLGAGVVVPMGERTVAVDLQLRNALDEEYASFLSRYKTYALDPGRNLVVRVTAAF"
BASE COUNT          969 a         2375 c         2265 g          923 t
ORIGIN      
        1 gtcttccccg caccattctc gcccaccagc gccagccgct ccccgggcgc cagggtgaag
       61 tcgagaccgc gcaccgccca ctgctccgcc ccgggataac ggaagccgac attctcgaag
      121 ctgaaccccc ggaggatggg gttggggacc ggtcttgctc ccgggacggg tcgtatcccc
      181 ggctccaggg ccaggaagct gaagaggtcg tcgagataga ggctctgctc gaagatctgg
      241 gagagcgata gcaggacccg ctggatcaga tcgcggctct gccggaacga gccggccagg
      301 aaggtgagca ccccgatcgt gaacacgccc gccggcgagc ggtggccgat gaccgtgaga
      361 tagatgatca ccgcgtacgc cgcgtagtac cccagcgtcc cgaccgcggc cagcaggctg
      421 gagaccagac tccgccgcac cgcgagcgac ttgttgacct ggtagaactc ctgcgacagc
      481 cggtcgtagc ggcccaccag gaaatcggac aatccgaaga gcttgagctc cttggccgag
      541 acgtcgctcg cggcaatgta ccggaggtag tcgagctgcc ggcgctcggg ggtccaggag
      601 tagagaaggg aatagcccag cgaggcgaag tgggtctcgc ccagcagcga cggcagcacc
      661 gccacggcca gcagcaccag cagccacggc acgtacaccg cgagcgccac cgagagggtc
      721 gccagggtga tcaggtcctg gatggtggcc agcaggaggg tgaagaggcc gatgcggttc
      781 accgtctgcc ggcgagcccg ctccagcttg tcgtagatct ccgcgttctc gaactgctcc
      841 aggtcgaggg tcgcggagtg acgcatgagc tcgacgctgg tacggttggc gaagagatcg
      901 cccagcaggc tctccagcag cgccgagagc cggctgagtc cctcgcccac cagcgcgatg
      961 cccagctcca gggccaggag ctcggccagc aggacccagg ggacggcacc cccggcgccg
     1021 acgactccga ccgcgcggac cacctcgtcc acgatcagtt tgccgaccca gagcacggcc
     1081 agcgggacca gcgcccgggc gatccgcagc accaggatgc cgaccacgta cctgggctcg
     1141 gtctcccata ccatgcggag caaccggggc agatggcgca gggcctggag ccgctgccgc
     1201 cacgacgccg gagggtcggg cggccgcttt cggccgcccg gattggggcg gacgacgggg
     1261 tgctgcagcg gcagggtcat gtcgcaaggt aattatcttg gtcccatgac tccctcgacc
     1321 acggcactcg tcaccggcgc cacccacgga atcgggcgcg ccaccgcgtt cgcactgggc
     1381 cgcgcaggct accgggtcgg tgtctgcgcg cgcaccgggt cgaaggtggc cgcgctggtg
     1441 gaggagctcc gcgccggcgg gatccaggcc gacggccgcg ccggcgacgt ggccgagccc
     1501 gccgatgccg gcgcgatcgt cgagcacgtg gtcggtgcgc tcggcgaagt cggcgtgctg
     1561 gtcaacaacg ccggggtcct catcgcccgc cccatcgggg agctgacgct ggaggactgg
     1621 gacgccacca tggcgaccaa cctgcgcggc ctcttcctca tgacccgcgc ggtgctgccc
     1681 gccatgcgcg cgaggcgtcg gggccacctc gtgaacgtcg ccagcctgtc ggcgcgcaac
     1741 ggcttcgccg gcggcgccgc ctacgccgcc tccaagcacg cggtgctcgg gttcggccgc
     1801 tcgttgatgc tcgagctgcg gaaggagggc atccgcgtga tcaccatctg ccccggctcg
     1861 gtggataccg ccatgctgcg cgaccagccg atgctcaagg ccgatcccga ccgcattctc
     1921 cagccggacg acgtcgcgga gaccatcctc cacaccctgc ggctgcccga ccgcgccctg
     1981 gtcagcgaag tcgacctgcg acccaccaac ccgtagcgcc gcgtgtccgg ggtgtcggtc
     2041 tcgatgtgcc tctgtcgcgg cgtgtcgttc gccgcgctcc tggagcgggc gcgcgcctcg
     2101 gggtgggacc tggacgcgtt gatgcgggag accggctgcg gagcgcaatg cgggctctgc
     2161 cgcccgtatc tgcggcgcat gctcacgacc ggtgagacca cgttccacga gctgctgtgg
     2221 gatcggccga gcggatgagt cggtcgggct gggccaggat caatgcgatc cgtctctcgg
     2281 tggggatcgc gatcgtcgcg gggtggctcg gcctgtactt cgccttccgg ggtcactggc
     2341 tcgggatcct gctgccgctg ctcgcgaccg gaatcctctt cggagcggtg cgcgcggggg
     2401 accggcgggc ccgccagcag aatgccgacc tgcgcgatgc cctcacctcc gcggccaccc
     2461 gcaaccgcga gctggagcgg ctgcgcgggg tcgccgcgac gctgctcgcc ggcagcgagt
     2521 tgagcggtct gctccaggag atcgccgacg ccgcggcgga gctgctgcag gccgaaggcg
     2581 gcggggtcac gctggtggtg gaggagggcc gcttcgtgcg gatcgcggcg gcgaccggcc
     2641 cgctcgcgaa ggcgaagggc gcgctgatcc cggtggacac ctcgctcctc ggcaccgtgg
     2701 tcaccaccgg cactcccatg gtcgcccgcg acatcgaggg cgatccgcgc agctaccgga
     2761 tcccggggct ggaggtctcg ctccgcaccg ccgcgatcgt gccgctccga tcggcgggcg
     2821 tggtcatcgg caccgtcagc gtgtacaacc accgcgacgg acggcccttc ggcgatcctg
     2881 acctgcaact gctcgagacc ctgggcgacc aggtggtggt cggcctcgac cgcgccgcgg
     2941 tgctggacga aatccgccgc agcgagcgaa ccctggcggc caggaacgcg gagctgcagc
     3001 gggccacccg gctcaagagc gagtttctcg ccaacatgag ccacgagctc cgcacgccgc
     3061 tcaacgccat catcggcttt tccgatctga tgctgaccga gggtgtcggg ccggtgaccg
     3121 cgcagcagcg cgagttcctg gaggcgatcc ttcgcaacgg ccgccacctg ctggaactga
     3181 tcagcggcat cctcgacctg tccaagatcg aggccggccg catgtcgctc tcgctgtcgc
     3241 cgaccgacct tcgcgaggcg atcaccggcg cggtggccga cacggagagt ctccggcggg
     3301 cgaaacggca gagcgtgtgg ctggagctcg acgactcgcc gctccacgtc gtcgccgacg
     3361 gggtacgggt ccgccaggtc ctgttcaacc tcctctccaa cgcctccaag ttcaccgggg
     3421 agggcggctc gatcatcctc tccgcgctca gcacccgggc gccactcgcc cctccggccg
     3481 agcgggccgg agaggagcgg aagctggtga cccaggatgt ggtctgggtc gcggtggccg
     3541 acaccggcat cgggatcccg ccgcaggaaa tgtccaagct gttccgggag ttcagccagg
     3601 tagacagcac cgccagccgg caggcccagg gtaccggact cggcctggcg ctcagcaaga
     3661 agctggtgga gctgcacggc gggaccatcg gcgcggagtc cctccccggc cggggctcca
     3721 ccttctggtt catcctgccg gccgacggac cggtccggcg caaccagccc ggtgtgtttt
     3781 cgggctcgac ggcgtgaatc ctggagctcc ccggtcccgt cgtcggggta tattgccctg
     3841 agtcccatgc gccccactgc cacccgccgc ctcaaagcgc tcgtcctcac cgccgttctc
     3901 ctgatcggcg gcagcggcac ctccgcgctc gacgtcgcgc tgtaccacct gggcgggaac
     3961 gtcgaggcgc ccgcggccgt ccgcatcgcc ggcaccgacg caccccgccc ccacggcgat
     4021 gcctgcgccc tcctcgactg ggccgcccgc ggtccctaca ccgtcgccct cgccgctctc
     4081 ccggctgtgg cgccgggcgc ggaagcgggc ccggctccca ccgtccgggt ccagacgccc
     4141 cgcccggccg atctctcctt cacctcgcgt ccccgcgcgc cgccgctcca gctgacctga
     4201 tcgtccgtcc gacaacgaat cggtttcggt ccatcgcgcc tgccggcctc gccgcaggcg
     4261 ggtcttcacg ccactggagt cagcgatgca tccgctcatc atggccgcga cgctgctcgc
     4321 ggccgcccca acctccgcga gcgacaccgc gcccccaccc cgcaccctct ccgggcgggt
     4381 cagcaatccg gcgggagcgc cgctctacca ggcccgggtc accgtcccgg aggccaaccg
     4441 ctccaccacc accgacctgg aaggtcacta cgtcgtcgcc gagctgccga gcggcaccta
     4501 cagcgtcagc ttctccgcca tcggctacgc gccgcaggtc caccgggtca ccctcggtga
     4561 cgaggacctc acgctggacg tcgagctcaa gccctcgctg gtcgagctgc cggatctcca
     4621 ggtgaccgcc gcgccgctgg cgaccacctc gctcacctca ccgcagccgg tcagcgtgct
     4681 gggcggctcc gacctcgagg cgggccgctc gcccacgttg ggcgagacgg tgagcgcgct
     4741 tccgggggtc cggagcttca gcaccggttc cggcgtgggc aagccggtca tccggggtct
     4801 cacctcgaac cgggtgctcg tcctcgccga cggcgagcgg gtcgagagcc agcagtgggg
     4861 ggacgagcac ggccctcagg ttgaggcggc cgaggccgac cgcatcgaag tgatccgcgg
     4921 gcccgcgagc gtgctttacg ggtccgacgc gatcggcggc gtgatcaacg tggtctcccc
     4981 cccgctcccc gacggccagg gccggcggcc gttcgcctcc ggccgagcgg tggcatccta
     5041 cagcaccaac aacgagcagc ccgacggcac actcgctctc gaaggcgcct ccggccccgt
     5101 cggcttccgc ggcagcctga cggggcgtac cgcgggcgac gtgcggaccc cggcgggcga
     5161 gctggccaac agcggcctgt ggaccgtgca tggctccggt acggtgggct accgcggggg
     5221 ctggggagcg gtgagcgcca cctacgtgcg gcgcgacgag cgggtggaga ttcacgagga
     5281 cccggcggaa gatccggggg ccaccccctt tcagcgcatc ggcgacgacc gcgtgcatct
     5341 gagcggcagc atcccggtcg gcgcctccca cctcgacatc gatctcggcg ccggccgcaa
     5401 ccggcggcgg gagttcgagg aggaaggggc cgaggaggtc gccctgggcc tgctgtcgcg
     5461 cacctggagc gcggacgtgc gactgcacca tgcgcccgtc ggccgggtgg cggggatcgt
     5521 cggtctgagc ggcctgcgca actcgctgga gaagttcggc gaggagacgc tgatccccga
     5581 gaacgcctac aacaacgtgg gcgtctacgc cttcgagcag gcggagctgg gactttggag
     5641 cctgtcgctc ggcgctcgct acgactatcg ccgcctcagc gtggaggacg actcggcgct
     5701 gggtgttgag gcgcagcggc gtacctacca ctcggtcacc ggcaacgtcg gcgccctgta
     5761 ccgggtggcg gagccggtcg ccctggtgct caacctgggc cgcgggtatc gcgcgcccac
     5821 ggcctacgat ctcttcgcca acggggtaca cgagggcacg gtccgcttcg agcggggcga
     5881 ccctaccctg gagaacgaga cctcggtcaa cggcgatctc gcggtgcgga tgcagaccag
     5941 ctcggtcagc gccgagctgg gcgccttcgc gaactacatc gacaacttca tcttccccga
     6001 tcccaccggg gaggtggatc cggagtcggg gctcctgatc ttcgacatca cccagggcaa
     6061 cgcccggctg accggcttcg aggccgcggt ggagtaccac gccacccagt ggctgcatct
     6121 ccggagcacc gccgactata cccgtggccg gaaccgctcg accgagacgc ccctcccctt
     6181 catcccaccg tttcgggtga cctactcggt ccgtctggag ggcggcgacc gcggcaggtt
     6241 ccagcagccc tacctctcga tcggcgcgga atcgaacgcc cggcagaccg acctggatcc
     6301 cgaggacttc gcgccggacg gctacacgct ggtacacctg ggtgcgggcg tggtggtgcc
     6361 catgggggag cgcacggtgg ccgtggacct ccagctccgg aacgccctcg acgaggagta
     6421 cgcgagcttt ctcagtcggt acaagaccta tgccctggac ccgggaagga acttggtggt
     6481 gcgggtgacg gcggccttct agcgccgggg ctcgcgcttc cagcccgggt ga
//
LOCUS       DASUYN010000320         2402 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_328070, whole genome shotgun sequence.
ACCESSION   DASUYN010000320 DASUYN010000000
VERSION     DASUYN010000320.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2402)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2402)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2402
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_328070"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..805)
                     /locus_tag="VF061_06285"
     CDS             complement(<1..805)
                     /locus_tag="VF061_06285"
                     /inference="COORDINATES: protein motif:HMM:NF045177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669146.1"
                     /translation="MTTPLEIRGPDVPGQDRVLTPDAIGFLEPLLRRFAPQRDRLLAR
                     RRDVQQRLRAGGLPDFLTETADIREAEWTVAPSPADLTDRRVEITGPVERKMMINALN
                     SGARVFMADFEDALSPPWTNVITGQVNCMDAVRRTLEYRSPEGKRYVLGDRLATLVVR
                     PRGWHLEEKHILLQGRPDRAAGERQRVLGRVEDVVPEPGLEMALQLGEVEVGAAPSRP
                     ELARVMEEVECEVHQARRHRPSLQQNVLLLQMPTPRPHDERGQAIAEDIA"
     gene            complement(887..1519)
                     /locus_tag="VF061_06290"
     CDS             complement(887..1519)
                     /locus_tag="VF061_06290"
                     /inference="COORDINATES: protein motif:HMM:TIGR01065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HEX6669147.1"
                     /translation="MRLREPFNAGSHLVGLLLAAAGTWFLLRGADGAAQVAAFGIYGA
                     TLVLLYGASTCYHGLHLSDRGLRRLRTLDHIAIYFLIAGTYTPVAAITLRDSVGPPLL
                     AASWAIAGAGIPFKIRWLDAPVWISTGSYLGMGYLALVAVVPLAREVGDGLGWLVAGG
                     IAYTVGAVVYALERPDPLPGRFGHHGLWHLLVLAGSACHFIFIARHVAPA"
     gene            1697..>2402
                     /locus_tag="VF061_06295"
     CDS             1697..>2402
                     /locus_tag="VF061_06295"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX6669148.1"
                     /translation="MRVALFSEVYWPMVSGVGVTLLRLTEALQTRGHQVRVYSANYGL
                     APGQADRPEVHRSPSVPLFLYPDVQWAFPRMRDVLADLERFRPDVVHVATEFSLGIAG
                     VKAARQLGLPLVASAHTDYDRYAARYGVTWALRAGWHYLRWFYGQAHKVLCPSRIYEQ
                     HLHSRGVQNTGLWSRGVDPEWFHPRFRSAEHRARFGVGPTDLLVTYIGRIAREKNLEL
                     LLRAWETLAPVRGSAQL"
BASE COUNT          354 a          836 c          859 g          353 t
ORIGIN      
        1 gcgctatgtc ctcggcgatc gcctggccac gctcgtcgtg cggccgaggg gttggcatct
       61 ggaggagaag cacattctgc tgcagggacg gccggtgccg gcgagcctgg tggacttcgc
      121 actctacttc ttccataacg cgcgcgagct cggggcgcga gggagcggcc cctacttcta
      181 cctccccaag ctggagagcc atctcgaggc ccggctctgg aacgacgtct tcaacgcggc
      241 ccaggacgcg ctggcgctcc cccgcggcac gatccgggcg accctgcagc aggatgtgct
      301 tctcctccag gtgccaaccc ctcggccgca cgacgagcgt ggccaggcga tcgccgagga
      361 catagcgctt cccctcgggg ctccggtatt ccagcgtccg gcgcaccgcg tccatgcagt
      421 tgacctgccc ggtgatgacg ttggtccagg gcggcgacag cgcgtcctcg aagtcggcca
      481 tgaagacccg cgcccccgag ttgagcgcgt tgatcatcat cttgcgctcg accggtccgg
      541 tgatctcgac ccggcggtcg gtcaggtccg cgggagaggg agccacggtc cattcggcct
      601 cgcggatgtc ggccgtttcc gtcaggaagt cgggcagccc acccgcgcga aggcgctgct
      661 gcacgtcgcg tcgccgcgcg agcagccgat cgcgctgggg cgcgaaccgg cggaggagcg
      721 gctcgaggaa tccgatggcg tcgggggtaa gaacgcggtc ctgcccgggc acgtcgggcc
      781 cgcggatctc gagaggggtc gtcacgctgc ggctcccgga gggaagtttg gtgccgcgga
      841 gtgtagcggg gcgggggcga ccccgggagg ggaagccggg gccgtctcag gccggagcga
      901 cgtgccgcgc gatgaagatg aagtgacagg cgctcccggc gagcaccagc aggtgccaga
      961 gcccgtgatg cccgaaccgc cccggcaggg gatcggggcg ctccaacgcg tagaccaccg
     1021 ctcccacggt gtacgcgatc ccccccgcca ccagccagcc cagcccgtca ccgacttccc
     1081 gggccagcgg caccaccgcc accagcgcca ggtaccccat gcccaggtag ctgccggtgg
     1141 agatccagac cggcgcgtcc agccaacgga tcttgaacgg gatgcccgcg ccggcaatcg
     1201 cccagctcgc ggccagaaga ggcggtccga ccgagtcgcg cagagtgatg gcggccaccg
     1261 gggtgtaggt tccggcgatg aggaagtaga tcgcgatgtg gtcgagcgtg cggagccggc
     1321 ggagcccccg gtcgctcagg tgcaggccgt gatagcaggt gctcgcgccg tacagcagca
     1381 ccagcgtcgc gccatagatc ccgaaggccg ccacctgggc cgccccgtcc gcgcctcgga
     1441 gcaggaacca ggtgccggcc gcggcgagca gcaggccgac gaggtgggag ccggcgttga
     1501 acggttcacg gaggcgcatg gagggaatct acccctgtgc gatcgggccg gttgcgtctc
     1561 ctgcccgtcg ggcgtcaccc ttgtaacggg cctcggttcg aaatacggta cagggacggg
     1621 gccgctggcc tccccgcggc gcggatgggg cggtggagaa ttcgtaggtg acacggtgaa
     1681 gggatcctca cagagcgtgc gcgtagccct gttctccgaa gtctattggc cgatggtgag
     1741 cggggtcggg gtgacgctcc tgcgactcac cgaggcgctg cagacgcgtg ggcaccaggt
     1801 ccgggtctat tcggcgaact acggcctggc cccggggcag gccgaccggc cggaagtcca
     1861 tcgctcgccc agcgtgccgc tcttcctgta tcccgatgtc cagtgggcgt tcccgcggat
     1921 gcgcgacgtc ctcgccgacc tggagcgctt ccggcccgac gtcgtccacg tggccaccga
     1981 gttctccctc ggcatcgccg gggtcaaggc cgcccgccag ctggggctcc cgctggtggc
     2041 ctccgcccac acggactacg atcgctacgc cgcccgctac ggggttacct gggccctccg
     2101 ggccggctgg cattacctcc gctggttcta cggacaggcg cacaaggtcc tgtgcccgtc
     2161 gcgcatctac gagcagcact tgcacagccg cggggtccag aacaccggtc tctggagccg
     2221 gggtgtggat ccggagtggt ttcacccccg cttccgcagc gccgagcacc gcgcgcgctt
     2281 cggcgtgggc ccgacggatc tcctggtcac ctacatcggc cggatcgcgc gggagaagaa
     2341 tctcgagctg ctgctccgcg cctgggagac gctggcgccg gtgcgcggct ctgcccagct
     2401 cg
//
LOCUS       DASUYN010000321         3428 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_989700, whole genome shotgun sequence.
ACCESSION   DASUYN010000321 DASUYN010000000
VERSION     DASUYN010000321.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3428)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3428)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3428
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_989700"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..958)
                     /locus_tag="VF061_06300"
     CDS             complement(<1..958)
                     /locus_tag="VF061_06300"
                     /inference="COORDINATES: protein motif:HMM:NF014598.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009267 - cellular response to starvation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation CstA family protein"
                     /protein_id="HEX6669149.1"
                     /translation="MLSRLVWLGVALVGAAGWGMLALRRGETVSAAWLVLAAVGTYLV
                     AFRFYSRFLADRVFGLNDRRATPAERLANGRDYVPTGRWVLFGHHFAAIAGAGPLVGP
                     VLAAQFGYLPGTMWIVFGVVFGGAVQDFIILFGSMRRDGKSLGQMAKEETGPVTGMLA
                     MVAVLAIMVILLAVLALVVVNALRDSPWGVFTILCTIPIAILMGYWMKVWRPGQTLEA
                     SAFGVALLMLALVGGRYVAESPALAPLFTHSGLTIAYAIIAYGFVASVLPVWMLLCPR
                     DYLSTFMKIGTILLLALGILLVLPPLNLPATTRFIDGTGPVFA"
     gene            1034..1900
                     /locus_tag="VF061_06305"
     CDS             1034..1900
                     /locus_tag="VF061_06305"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX6669150.1"
                     /translation="MPLPSFGFGHRPSWEYEAPDASAGTLEEPEPQPIRRGWRGKTAV
                     VTGGATGLGRAVAMEFGKLGCNVAFCFVNLPGRDVVEQALLTETALAAMGVNVYASRC
                     DVRHRDEVERFIADAKQKLGGVHFLVNNAGIASDGALWRLSEAAWRDVLDTNVTGAFN
                     CIRSVAPIFRQQHYGKIVNVSAHQAERPGFGVANYAASKAALLGLTRAAAVELGPANV
                     NVNAVAPGFIRTERMAMLPSEVVERAQKSSVLGRVADPEDVAHVVSFLCSESARHITG
                     QTIVVDGGLSLE"
     gene            1964..2620
                     /locus_tag="VF061_06310"
     CDS             1964..2620
                     /locus_tag="VF061_06310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669151.1"
                     /translation="MKPIVVSMLALLSFSCAAGAQQPAPTSPPAPGKPAASVPTEALV
                     GQNVALLPITLVVADPALQSDTIYAPYRDRRTTLLWADSLIGEAFVGRAPEVRWVPPA
                     ELRKLARRSPGIVSDPDQMGQAMLRSPKVHEVPDPLRASLRNLMAVAGGRMVLVPASL
                     AFGREADGRLRADLTLVIADTRTGKVLWRTQAAGSGANPREALDAALAAVLPLDAGGP
                     "
     gene            2617..>3428
                     /locus_tag="VF061_06315"
     CDS             2617..>3428
                     /locus_tag="VF061_06315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /protein_id="HEX6669152.1"
                     /translation="MTYDVTLIPGDGIGPEITAQTVKVLEATGLRFNWDEELAGVSAV
                     EATGTPLPDATVESIRKNTVALKGPLTTPVGTGFRSVNVGLRKEFELYANIRPARSIL
                     PGGRFENVDIVLVRENLEGLYIGVEHFVQIGDDPRAVAESMAIVTRAGCERIVRYAFE
                     YALRQGRRKVTIVHKANILKMVSGLFLEVGRSIAQEYAGRLESNDMIVDNTAMQLVLR
                     PEQFDVMVTTNMFGDILSDEVSGLVGGLGLAPGANIGTKAAIFEAVHGSAPD"
BASE COUNT          545 a         1215 c         1192 g          476 t
ORIGIN      
        1 ccgcgaagac cggcccggtg ccgtcgatga accgcgtggt cgccggcagg ttgagcggcg
       61 gcagcaccag caggatcccc agcgcgagca ggaggatggt gccgatcttc atgaaggtgg
      121 agaggtagtc gcgcgggcag agcagcatcc ataccggcag gacgctggcg acgaagccgt
      181 aggcgatgat cgcataggcg atggtgagcc cggaatgggt gaagagcggt gccagtgcgg
      241 gcgactcggc gacgtagcgg ccgccgacga gggccagcat gaggagggcg acgccgaacg
      301 cggaggcctc cagcgtctgg ccggggcgcc agaccttcat ccagtatccc atcaggatcg
      361 cgatcgggat ggtgcagagg atggtgaaga cgccccacgg actgtcgcgc agcgcgttca
      421 ccaccaccag cgccagcacc gccagcagga tcaccatgat ggcgaggacg gcgaccatgg
      481 ccagcatgcc ggtgaccggt ccggtctcct ccttggccat ctggcccagg gacttgccgt
      541 cgcgccgcat ggagccgaac aggatgatga agtcctggac cgcgccgccg aagacgacgc
      601 cgaagacgat ccacatggtc ccggggaggt agccgaactg ggcggcaagg accggtccca
      661 ccagcggccc ggcgccggcg atcgcggcga agtggtggcc gaagagcacc cagcgaccgg
      721 tgggcacgta gtcgcgcccg ttcgccagac gctccgcggg ggtggcgcgc cggtcgttga
      781 ggccgaacac ccggtcggcg aggaatcggc tgtagaagcg gaaggcgacg aggtaggtgc
      841 ccacggcggc gagcaccagc caggcggcgc tgaccgtctc gccccgccgg agcgcgagca
      901 tgccccagcc cgccgcgccg accagagcga ctccgagcca aaccagccgt gagagcatgg
      961 ctcaaataaa ccgtgttttc cccgcgcttc cagccttgcc ctccccccgg acggaccgta
     1021 ccttcgaggt cccatgccct tgccatcctt tggtttcgga caccggccgt cgtgggagta
     1081 cgaggccccg gacgcgagtg cgggcacgct cgaggagccg gagccacagc cgatccgcag
     1141 ggggtggaga gggaagaccg ccgtggtgac cggcggcgcc accgggctcg gccgcgcggt
     1201 ggcgatggag ttcgggaagc tgggctgcaa cgtggccttc tgcttcgtca acctgcccgg
     1261 gcgggacgtg gtggagcagg ccctcctcac cgagaccgcc ctcgccgcga tgggcgtcaa
     1321 cgtctacgcc tcccgctgcg acgtccgcca ccgggacgag gtggagcgct tcatcgcgga
     1381 tgcgaagcag aagctgggcg gagtgcattt cctggtgaac aacgccggca tcgcgagcga
     1441 cggcgcgctc tggcggctca gcgaggcggc ctggcgcgac gtgctggaca ccaatgtcac
     1501 cggcgccttc aactgcatcc gatcggtcgc gcccatcttc cggcagcagc actacggcaa
     1561 gatcgtgaac gtgagtgcgc atcaggccga gcgccccggg ttcggggtcg ccaactacgc
     1621 cgccagcaag gccgcgctgc tcggcctcac ccgcgccgcc gccgtcgagc tcggacccgc
     1681 caacgtcaac gtgaacgccg tggccccggg tttcatccgc accgagcgga tggccatgct
     1741 tccctccgaa gtcgtcgagc gtgcccagaa gagctcggtt ctcggccggg tggccgaccc
     1801 cgaggacgtc gcccacgtcg tctccttcct ctgctccgaa tcggcgcggc acatcacggg
     1861 acagacgatc gtggtggacg gggggttgtc gctggagtag aggcgtggct ccgttcgctc
     1921 cgctcagggt gacagccctc ggttgatcgt ttagtttccc gccgtgaaac cgatcgtggt
     1981 ctcgatgctc gcgctgctct cgttcagctg cgcggccggc gcgcagcagc cggcgccgac
     2041 cagcccgccg gcgccgggga agccggcggc gtccgtcccg accgaggcat tggtcggcca
     2101 gaacgtcgcg ctgctgccga tcaccctcgt cgtcgccgac cccgccctcc agtccgacac
     2161 gatctacgcc ccgtaccgcg accgccgcac caccctgctc tgggccgatt ccctgatcgg
     2221 cgaggccttc gtcggccgcg cgcccgaggt gcggtgggtg ccgccggccg agttgcgcaa
     2281 gctggcgcgg cggtcgcccg ggatcgtctc cgatcccgac cagatgggcc aggcgatgct
     2341 gcggtcgccc aaggttcacg aggtgcccga tcccctgcgc gcctccctgc gcaacctcat
     2401 ggcggtggcg ggcgggcgca tggtgctggt gcccgcgtcg ctcgccttcg gccgggaggc
     2461 cgacgggcgg ctccgcgccg atctcaccct cgtcatcgcc gacacccgca ccggcaaggt
     2521 gctctggcgc acccaggccg cgggcagcgg agccaacccc cgcgaggcgc tcgatgccgc
     2581 cctcgcggcg gtgcttcccc tcgacgccgg cgggccatga cgtacgacgt caccctcatc
     2641 cccggggacg ggatcgggcc cgagatcacg gcccagacgg tgaaggtcct cgaggccacc
     2701 ggcctgcggt tcaactggga cgaggagctc gcgggagtca gcgccgtcga ggctaccggc
     2761 accccgcttc cggacgccac cgtcgagagc atccgcaaga acaccgtcgc cctcaagggc
     2821 ccgctcacca ccccggtcgg caccgggttc cggtccgtga acgtcggcct ccgcaaggaa
     2881 ttcgagctct acgccaacat ccggcccgcc aggtccatcc tgcccggcgg ccggttcgag
     2941 aacgtggaca tcgtgctcgt gcgggagaac ctcgagggcc tctacatcgg ggtcgagcac
     3001 ttcgtgcaga tcggcgacga tccccgcgcc gtggccgagt ccatggccat cgtgacccgg
     3061 gccggctgcg agcgcatcgt ccgctacgcc ttcgagtacg ccctgcgcca ggggcgtcgc
     3121 aaggtcacca tcgtccacaa ggccaacatt ctcaagatgg tgagcggcct cttcctcgag
     3181 gtgggccgca gcatcgccca ggagtacgcc ggtcggctcg agtccaacga catgatcgtg
     3241 gacaacaccg cgatgcagct ggtgctccgg cccgagcagt tcgacgtcat ggtgaccacc
     3301 aacatgttcg gggacatcct gagcgacgag gtctccgggc tggtgggcgg cctggggctc
     3361 gcacccgggg ccaacatcgg caccaaggcc gcgatcttcg aggcggtgca cgggagcgcc
     3421 ccggacat
//
LOCUS       DASUYN010000322         2908 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_767080, whole genome shotgun sequence.
ACCESSION   DASUYN010000322 DASUYN010000000
VERSION     DASUYN010000322.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2908)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2908)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2908
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_767080"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(81..1214)
                     /gene="chrA"
                     /locus_tag="VF061_06320"
     CDS             complement(81..1214)
                     /gene="chrA"
                     /locus_tag="VF061_06320"
                     /inference="COORDINATES: protein motif:HMM:TIGR00937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015109 - chromate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015703 - chromate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromate efflux transporter"
                     /protein_id="HEX6669153.1"
                     /translation="MSLAAWTSFFLRLGTLGFGGPIALAAAMQTDLVEHRRWVTSDEY
                     KEGLALAQLAPGPLAAQLAIYLGWIRGGVLGATITGLAFVGPSFLMVIVLAWVYLRYG
                     GLAWMQAVFYGIGAAVIAIIARGAIKLAERTVGRDPLLAVVMLVNAGVVAWTERELLW
                     VFVLSGMLVPALRGVAARFPPGTVIPLMLPWAWWVTGLHGPADVSVLGRVFAFFAKAS
                     LVVFGSGLAVVPFLHGGVVVSFGWLTERQFLDAVAVSMITPGPVVITVAFIGYLVAGP
                     LGGLVAALGMFIPTYLAVVLMAPWFRRVMANRSLRYAVDGVTAAAAGAIGGAVVVLGR
                     RALIDGPTWAIALLSLVLLWRARRIPEPALIIGAGLVGLLLPH"
     gene            complement(1360..2529)
                     /locus_tag="VF061_06325"
     CDS             complement(1360..2529)
                     /locus_tag="VF061_06325"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX6669154.1"
                     /translation="MRHLLALERNTLAVVGAMFLMALGENLWRRFLPKYLEALGAPIV
                     AIGAYGSVQDALDGLYQYPGGWASDRYGRRRALLLFVSLAALGYLIIAAAPTWPVVFV
                     GLLFIMCWTSMASPTLFAVVGDALPSRRRSVGFSVQAILRRVPILGAPALGGVLITVI
                     GLQAGVRAGLLASVVLALVTLAVVRRMRIDRSATATSGDIRTVWRSLPGPLRRLLISD
                     IFIRTCDAMVDVFLVLYAVNIVGISAPAFGGLVGVQVATVILCSLPAAHLADRVGRKP
                     FVIATFVAFASFPLTVIAASSLAGLVAAFVVGGLREIGEPARKALILDLVRPDVRARG
                     VGLYYLVRSLAITPAATIGGLLWQVSPAFPFLMAGAVGLVGVILFTLTVDEQHAG"
     gene            complement(2592..>2908)
                     /locus_tag="VF061_06330"
     CDS             complement(2592..>2908)
                     /locus_tag="VF061_06330"
                     /inference="COORDINATES: protein motif:HMM:NF021357.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="chromate resistance protein ChrB
                     domain-containing protein"
                     /protein_id="HEX6669155.1"
                     /translation="PAGAKALGGTPFDMRGVALGHHEGRCSFETLLHAYQLRDPALEE
                     IAAMVHDADLDDEQFRSPEAPGLDAIIRGLGLVIRDDQELLRFTERVYDGLYAWLQRT
                     TR"
BASE COUNT          566 a         1037 c          961 g          344 t
ORIGIN      
        1 gctcccaatc cgtgcagccg tacattatcc gacaccatcg cgggacctgg ccagggcggt
       61 gcgcccccac agtgcctgac tcaatgcggg agcaggagcc cgaccagccc cgccccgata
      121 atgagggccg gctccgggat acgacgcgcc cgccagagga gcaccagcga gaggagcgcg
      181 atggcccacg tcgggccgtc gatgagcgcc cggcgaccga gcactactac agctcccccg
      241 atcgccccgg cggccgcggc agtgacgccg tccacggcgt accggagcga gcgattggcc
      301 atgacccggc ggaaccacgg agccatgagg acaaccgcca ggtatgtggg gataaacatg
      361 cccaatgccg ctaccagccc gccaagcggc ccggccacca ggtagccgat gaaggccacc
      421 gtgatgacca caggacccgg agtgatcatc gagacggcaa cggcgtcgag gaactgacgt
      481 tcggtcagcc agccgaagga caccacgacg ccgccgtgca ggaagggcac cacggccagg
      541 ccgctgccga acactacgag ggaggccttc gcaaagaagg cgaatacccg gcccagcaca
      601 ctcacatcgg ctgggccgtg gaggccggtg acccaccagg cccacggcag catgagcgga
      661 atcaccgtcc ctggggggaa ccgtgcagca accccgcgaa gcgccggcac cagcattcca
      721 ctcagcacga agacccacaa cagctcgcgc tcggtccagg ccaccacgcc tgcgttcacc
      781 agcatcacaa ctgcgagcag cgggtcacgg ccgaccgtac gctcggcgag ctttatcgcg
      841 ccgcgcgcga tgatggcgat gaccgcggct ccgataccat agaagaccgc ctgcatccag
      901 gcgaggcccc cgtagcggag gtacacccac gccagcacta tcaccatcag aaatgaggga
      961 cccacgaagg cgagccccgt aatcgtggct cccagcaccc cgccgcgtat ccagccgaga
     1021 tagatggcca actgcgccgc gagtggcccc ggcgcgagct gggcgagcgc cagcccttcc
     1081 ttgtactcgt cggaagtaac ccagcgccga tgctcgacga ggtcggtctg catcgccgcg
     1141 gcgagcgcaa tcggcccgcc gaacccgagg gtaccgagac ggaggaagaa gctggtccac
     1201 gccgcgaggg acacagccag taggccgtcg ggacgcgccg gctcgctgag cggagggccg
     1261 ggcgctgccg gtttcaatgg ttggttcatc tacgagggcg gcggtctcgg ggtcctacag
     1321 cggcacgccg acgccgcacc atgcgtagcg cttcgcacac taaccggcat gctgctcgtc
     1381 gacagtcagg gtaaagagga tgactcccac gaggccgacc gccccggcca tgaggaatgg
     1441 aaacgcgggt gacacctgcc agagcagtcc cccgatcgtg gcggccgggg tgatggccag
     1501 gctgcgaacc agatagtaca ggccgacacc ccgggcgcgg acgtcgggac gcacgaggtc
     1561 gagaatgagc gccttccggg ccggctcccc gatctcgcgc aggccgccca cgacgaacgc
     1621 cgccacgagc cccgccagag agcttgcggc gatcaccgtc aacgggaagc tcgcgaatgc
     1681 gacgaacgtc gcgatgacga agggcttccg tcctacccgg tccgccaggt gcgccgccgg
     1741 gagcgagcac agaatgaccg tcgccacctg caccccgaca aggccgccga acgccggagc
     1801 gctgatcccc acgatgttca cggcatagag cacgaggaag acgtccacca tcgcgtcaca
     1861 ggtgcggatg aagatgtccg agatcaggag ccggcgaagt ggccccggaa gcgagcgcca
     1921 caccgtccgg atatcccccg acgtggcggt cgcggaccgg tcgatgcgca tgcgccgcac
     1981 gacggcgagc gttacgaggg cgaggacgac ggaggcgaga agtcccgccc gcacgccggc
     2041 ctggagaccg atcaccgtga tgagtacgcc ccccagggcc ggggccccga ggatcggcac
     2101 tcgccgcagg atcgcctgaa ccgagaatcc caccgagcgg cgtctcgacg gcagcgcatc
     2161 gcccaccacc gcgaacagcg tggggctcgc catactggtc cagcacatga tgaacaggag
     2221 gcccacgaag acgaccggcc aggtcggtgc ggccgcgatg atcaggtatc cgagggccgc
     2281 aagcgaaacg aagagcagga gcgcccggcg gcgcccatag cgatcgctcg cccaccctcc
     2341 cggatactgg tagagcccgt ccagcgcgtc ctgcacgctt ccgtaggccc cgatcgcgac
     2401 gatcggggcc ccgagcgcct cgaggtactt cggcaggaac cgccgccaca ggttttcccc
     2461 gagcgccatg aggaacatcg cgccgaccac cgccagcgtg ttccgctcca acgcgagcag
     2521 atggcgcatg cggtccaggc ctcgtagctc ggccgcctcc gccatgctct cagtgctcgt
     2581 tgccggccgg gtcagcgtgt cgtccgctgg agccatgcgt aaaggccgtc gtagacccgc
     2641 tcggtgaacc ggagcagctc ctggtcgtct cggatcacca acccgaggcc ccggatgatg
     2701 gcatcgagcc ctggcgcctc ggggctgcgg aactgctcgt catcgaggtc ggcatcgtgc
     2761 accatcgccg cgatctcctc gagcgcgggg tcccggagct ggtaggcatg gaggagcgtc
     2821 tcgaacgagc atcgcccctc gtgatgcccg agcgccacgc cgcgcatgtc gaacggcgtg
     2881 cctccgagcg ccttggcccc ggcgggat
//
LOCUS       DASUYN010000323         2918 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_989826, whole genome shotgun sequence.
ACCESSION   DASUYN010000323 DASUYN010000000
VERSION     DASUYN010000323.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2918)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2918)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2918
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_989826"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2297
                     /locus_tag="VF061_06335"
     CDS             <1..2297
                     /locus_tag="VF061_06335"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEX6669156.1"
                     /translation="QYFQLAGKAAQDLMWDWDLESGAMVWAGTTEPYFGVAPERMADL
                     GMSDHRLWAERVHPEDLAATEAAAAAAITGGAESWQHEYRFRRADGSWADILERAYIA
                     RDEQGRGLRAIGAMEDITSRKAAERAAVRLATIVATSNDAIVAKSLEGVVTGWNAAAE
                     RVFGYSEQEMVGQSIFVLVPEELHDSERDILDRIRRGERVDFADTVRIRKDGGRINIA
                     LTVSPVWDSSGVVVGASSIKRDITDRKRAEEELARREERYRALVTATTSIVWLADPEG
                     RFVGDQSTWCQYTGQSPEDYAGLGWIDAVHPDDRQAVKRGWRQARERGAIWEVRTRLW
                     SARHQAYRHVVSRAVPNIAPSGGVLEWIGAVTDVEDRWLAEERLRHADRMESVGRLAG
                     GIAHEANNQMTVILGAAEFLSRALRDDAAKGDLEHVRRAARRTAAITQQLLAFSRRQV
                     LQPQVLDLNAVVAALEPILQRALGEISQVKLRLADDLSAVRADPGQLDQVLLNLALNA
                     RDAMPDGGTLTIETVNVTVDEHHATAKALEPVAPGDYVALVVTDTGAGMDRNTLDHVF
                     EPFFTTKPVGEGTGLGLATVYGIVKQSGGVVSVYSEPRHGTSFRIYLPIAARGRERER
                     LAAPGLSGGGHETVLVAEDEPAVRAILARALREYGYTLLEARDGAHALEVAERAPAPP
                     DLVIADVVMPGMGGKPLAEEVERRWPGTPVLFTSGYTGADAVRRGLLDEGREFMQKPI
                     EPEALAQHVRRILDASAGKAAPGS"
     gene            complement(2322..>2918)
                     /locus_tag="VF061_06340"
     CDS             complement(2322..>2918)
                     /locus_tag="VF061_06340"
                     /inference="COORDINATES: protein motif:HMM:NF016557.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669157.1"
                     /translation="LTRRWSLLASRVPHALLVPRIVTSSPDEAHEFHLAALGRGHEGV
                     MVKALDAAYEAGRRGRRWLKVKTARTLDLVVLAAEWGHGRRRGWLSNLHLGARDPTTG
                     GFVMLGKTFKGMTDEMLRWQTERLAELEERRDDYTVYVRPELVVEVAFNDLQASPQYP
                     GGLALRFARVKGYRPDKSADDADTIDTLREIYRRQGGG"
BASE COUNT          430 a         1008 c         1073 g          407 t
ORIGIN      
        1 atcagtattt ccagctcgcc ggcaaggcgg cccaggacct gatgtgggac tgggacctgg
       61 agagcggcgc aatggtgtgg gccggcacga cggaaccgta cttcggggtg gcgccggaac
      121 ggatggcgga cctcgggatg agcgaccacc ggctgtgggc ggagcgggtg catcccgagg
      181 acctggcggc caccgaggcc gcggccgccg cggcgatcac cggcggcgcg gagtcgtggc
      241 agcatgaata ccggttccgc cgagccgacg gctcctgggc cgacatcctg gagcgggcct
      301 acatcgcgcg ggacgagcag ggtcgggggc tccgggccat cggggccatg gaggacatca
      361 cctcccgcaa ggcggccgag cgcgccgccg tccggctggc cacgatcgtg gccacgtcca
      421 acgacgcgat cgtggccaag agcctcgagg gagtcgtcac gggctggaat gcggcggccg
      481 agcgggtgtt cgggtattcg gagcaggaga tggtgggtca atccatcttc gtgctcgtcc
      541 ccgaggagct gcacgattcc gagcgggaca tcctcgaccg gatccggcgc ggggagcggg
      601 tggacttcgc cgacacggtg cggatccgca aggacggcgg ccgcatcaac atcgccctca
      661 cggtctcgcc ggtgtgggat tcctcgggcg tggtcgtcgg cgcctcctcc atcaaacggg
      721 acatcaccga ccggaagcgg gccgaggagg agctggcccg gcgggaggag cggtatcgcg
      781 ccctggtcac ggcgaccacc tccatcgtgt ggctcgccga tccggagggc cgattcgtgg
      841 gggaccagtc cacctggtgc caatacaccg gacagtcccc ggaggactac gccggtctcg
      901 ggtggatcga cgcggtccat cccgacgacc gtcaggcggt caagaggggg tggaggcagg
      961 cgcgcgagcg gggtgccatc tgggaggtcc gcacgaggct ctggtcggcc cggcaccagg
     1021 cctaccgcca cgtggtctcg cgggccgtcc ccaacatcgc gcccagcggc ggggttctgg
     1081 aatggatcgg cgccgtcacc gacgtcgagg accgttggct ggccgaggag cggctgcgcc
     1141 atgccgaccg gatggagtcg gtggggcggc tcgcgggggg catcgcccac gaggccaaca
     1201 accagatgac ggtgatcctc ggtgccgccg agttcctctc gcgtgccctc cgggacgatg
     1261 cggcgaaggg agacctcgag cacgtccgcc gcgccgcccg gcgcaccgcc gccatcaccc
     1321 agcagctgct ggccttcagc cgccgtcagg tgctccagcc ccaggtgctg gacctgaacg
     1381 cggtcgtcgc cgccctggag cccatcctcc agcgcgcgct gggggagatc tcgcaggtca
     1441 agctgcgcct ggccgatgat ctcagcgcgg tgcgagccga tccgggccag ctggaccagg
     1501 tgctgctcaa cctggccctc aacgcccgcg atgccatgcc cgacggtgga accctgacga
     1561 tcgagaccgt caacgtgacc gtggacgagc atcacgccac ggcgaaagcg ctggagcccg
     1621 tcgccccggg tgattacgtc gcgctggtcg tgaccgacac cggcgccggc atggatcgga
     1681 atacgctgga ccacgtcttc gagcccttct tcaccaccaa gccggtgggt gagggcaccg
     1741 gcctcggcct ggccacggtc tacggcatcg tgaagcagag cggcggagtc gtgtcggtct
     1801 acagcgagcc ccggcacggg acgtccttca ggatctacct gcccatcgcc gcgcggggtc
     1861 gggagcgcga gcggctcgcc gctcccggac tctcgggtgg cggccacgag acggtcctgg
     1921 tggcggagga cgagccggcg gtgcgcgcca tcctggcgcg ggcgctgcgg gagtacggct
     1981 acacgctgct cgaggccagg gacggcgccc atgccctgga ggtggccgag cgcgccccgg
     2041 cgcctccgga cctggtgatc gccgacgtgg tgatgccggg catgggcggc aagccgctgg
     2101 cggaggaggt ggagcggcgc tggccgggca cgcccgtact cttcacttcc ggctataccg
     2161 gcgccgacgc ggtgcgccgc gggctcctgg acgaagggcg cgagttcatg cagaagccga
     2221 tcgagcccga ggccctggcg cagcacgtcc gtaggatcct ggacgccagc gccggaaagg
     2281 cggcgccggg ctcatgaggt tcgttgccgg cgggccagcc gtcacccgcc accctggcgc
     2341 cggtagatct cccgcaaggt gtcgatcgta tccgcgtcgt ccgccgattt gtccggacgg
     2401 tatcccttca cccgggcgaa gcgaagcgcc agtcctccgg gatactgcgg actggcctgg
     2461 aggtcgttga aggcgacctc caccaccagc tcgggccgaa cgtacaccgt gtagtcgtcg
     2521 cgccgctcct ccagctccgc cagccgctcg gtctgccagc gcagcatctc gtcggtcatt
     2581 cccttgaacg tcttgcccag catcacgaac ccgcccgtgg tcggatcgcg ggcgccgagg
     2641 tggaggttgc tgagccagcc ccggcggcgc ccgtgtcccc actcggcggc cagcacgacg
     2701 aggtcgaggg tgcgggcggt cttgaccttg agccaccgcc tcccccggcg tcccgcttcg
     2761 tacgccgcgt cgagcgcctt caccatcacg ccctcgtggc cccggccgag cgccgcgagg
     2821 tggaactcgt gggcctcgtc gggagacgag gtgacgatgc gcggcacgag gagcgcgtgg
     2881 ggtaccctgc tcgccagcag cgaccaccgc cgggtgag
//
LOCUS       DASUYN010000324         3192 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1871419, whole genome shotgun sequence.
ACCESSION   DASUYN010000324 DASUYN010000000
VERSION     DASUYN010000324.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3192
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1871419"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..573
                     /locus_tag="VF061_06345"
     CDS             <1..573
                     /locus_tag="VF061_06345"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX6669158.1"
                     /translation="TMVERVAVEHGRVDLLVNNAAGNFYAASATLSPNAWRAVVETDL
                     YGTFYCCQAVHPVMQRQGGGRIVSISMTLHYRGWPLMAHATAAKAGVDALTRTLALEW
                     AGDGITVNAIAPGPIPTDGVKQAFTPPGGAPNVPAMDEYAARTIPLRRWGRPEDVGQL
                     VTFLAGPAGDWITGAIFVVDGGSWLAGGRG"
     gene            584..1282
                     /locus_tag="VF061_06350"
     CDS             584..1282
                     /locus_tag="VF061_06350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669159.1"
                     /translation="MFLGHFGAAFALKRLEPKLSLGTLFLAVQLPDLLWGAFLLLGWE
                     EVRIDPGYTAVTPLQFIRYPLSHSLLGMTGWAVALAAVYYSWPTRDTSRHWQAAALVG
                     LAVLSHFVLDVVVHVPDLPLSGGSSTRLGLGLWNHPVATLVLELATLAGGVAVYAAFR
                     SIRHPARGGRLAGLVAVLVVIYLVSYFGPPPPSVRAIGVADLVGLLLLVAFAAWADRR
                     ATPAELAAAGVRAR"
     gene            1285..1653
                     /locus_tag="VF061_06355"
     CDS             1285..1653
                     /locus_tag="VF061_06355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF423 domain-containing protein"
                     /protein_id="HEX6669160.1"
                     /translation="MDRLFFVIGSTSALVAVAAGAFGAHALRARLTPDLLAVFETGAR
                     YQMYHAFALLASAWAVTRWPGPWPVRAGWLFLIGTIVFSGSLYALALSGVRWLGAVTP
                     LGGAAFLAGWLCLLLGAARR"
     gene            1801..2436
                     /locus_tag="VF061_06360"
     CDS             1801..2436
                     /locus_tag="VF061_06360"
                     /inference="COORDINATES: protein motif:HMM:NF025605.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX6669161.1"
                     /translation="MTRPAQKWSRRPESRPTEILEAAFAVFAESGYEGTTIADVGKRA
                     GVSPALVVHYFGTKAELFAAVIQERFGSFVASEEALLASHRGSCRELLHHLLRRFWEH
                     MWEPGSIELAVAVKAERAEFPECTRTLSQVGARWRRLIEGVLEAGRQRGEFRVSGPHT
                     ARVITAMVMGVAEGSRCFGTIEAPASTPEELWSALVSLLDQGVLAAQGEPQ"
     gene            2460..>3192
                     /locus_tag="VF061_06365"
     CDS             2460..>3192
                     /locus_tag="VF061_06365"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX6669162.1"
                     /translation="MLAIVASACSNSNATPPAPPPPEVGVIAVEPRTLPLTYEYVGEV
                     QPVQRVEVRSRVDGVIEERPFTEGSLVKPGAVLYRLERVRFEAAYRSAGAQLANARRL
                     VGRLEPLAARQAIAQQDMDDARAAMEAAQAAYEEARKDRNDAVVRAEIGGRVGRTRLE
                     VGARVTGPAELLTTIEQVSPVYVTFRPSAQDQQGWRQDPSSRDLIRPGSALLVKVVLP
                     DGTELPRTGRLDYVSPSVDPGTGTLE"
BASE COUNT          400 a         1123 c         1170 g          499 t
ORIGIN      
        1 acgatggtgg agcgcgtcgc cgtcgagcac gggcgagtgg acctcctggt gaacaatgcc
       61 gccggcaact tctacgcggc ctcggcgacc ctgtcgccca acgcctggcg cgccgtggtg
      121 gagaccgacc tctacggcac cttctactgc tgccaggcgg tccatccggt gatgcagcgg
      181 cagggcggcg ggcgcatcgt ctccatctcc atgaccctgc actaccgcgg ctggccgctg
      241 atggcgcatg ccacggccgc caaggccggg gtggatgcgc tcacccgcac gctggcgctg
      301 gagtgggcgg gcgacggaat caccgtcaac gcgatcgcgc cgggcccgat tcccaccgac
      361 ggcgtgaagc aggcgttcac cccgcccggc ggcgcgccca acgtgccggc catggatgaa
      421 tacgccgccc gcacgatacc gttgcggagg tggggcaggc cggaggacgt cggccagctc
      481 gtcactttcc tcgccgggcc ggccggcgac tggatcaccg gggccatctt cgtcgtggac
      541 gggggatcgt ggctcgccgg cggacggggc tgaggaggcg accatgttcc tgggacactt
      601 cggggcggcc ttcgcgctca agcggctgga gcccaagctc tcgctgggga cgctctttct
      661 cgccgtgcag ctgcccgatc tcctctgggg cgccttcctg ctcctgggat gggaggaggt
      721 ccgcatcgat ccgggctaca ccgcggtcac gccgctgcag ttcatccgct atccgctctc
      781 gcacagcctc ctgggcatga ccgggtgggc ggtggccctg gccgccgtgt actactcctg
      841 gccgacgcgg gataccagcc ggcattggca ggccgcggcg ctggtcggcc tggccgtgct
      901 ctctcacttc gtgctcgacg tcgtggtgca cgtgcccgac ctgccgctct ccggcggcag
      961 ctcgacgcga ctggggctgg gcctgtggaa tcacccggtc gcgaccctgg tcctcgagct
     1021 cgcgaccctg gcggggggcg tggcggtata cgccgccttc cgctcgatcc ggcaccccgc
     1081 ccggggggga cgcctggccg gcctggtggc ggtgctggtg gtgatctacc tggtcagcta
     1141 cttcgggccg cctccgccga gcgtccgggc catcggggtg gcggacctgg tgggattgct
     1201 cctgctggtg gcgttcgccg cgtgggccga tcgtcgggcg acgcccgccg agctggccgc
     1261 ggcgggggtg agggcgcgct agcggtggac cggctcttct tcgtcatcgg ctcgacttcg
     1321 gcgttggtcg cggtggccgc gggcgcgttc ggcgcgcacg cgctgcgggc acgactcacg
     1381 cccgatttgc tggcggtgtt cgagaccggc gcccgctacc agatgtacca tgccttcgcg
     1441 ctgctcgcga gcgcctgggc ggtgacgcgc tggccgggcc cgtggccggt gcgggccgga
     1501 tggctcttcc tcatcggcac gatcgtcttt tccggcagcc tctacgcgct ggccctcagc
     1561 ggcgtccgct ggctgggggc cgtcaccccg ctcggcgggg ccgccttcct cgccggctgg
     1621 ctgtgcctcc tcctcggggc cgcgcgccgc tgagccccac tccgccctac aggatcctcg
     1681 cccctcctac aaataagtaa cgattcgttc aatttctcgg tagcgcttgc gcccgggcgc
     1741 tctacggcta cattccaact cttgttgatt ctgcgtacaa tactttcgcc gaggccgtcc
     1801 gtgaccagac ccgcccagaa gtggagccgc cgcccggagt cgcgtcccac cgagatcctg
     1861 gaggccgcct tcgccgtgtt cgcggagtcg ggctacgagg gcaccacgat cgccgatgtc
     1921 gggaagcgtg ccggggtgag ccccgcgctc gtggtccact acttcggcac caaggccgag
     1981 ctcttcgccg cagtcatcca ggagcggttc gggagcttcg tggcctcgga ggaagcgctg
     2041 ctggcgtccc atcggggcag ctgccgcgag ctgctgcacc acctgttgcg gcggttctgg
     2101 gagcacatgt gggagccggg gagcatcgag ctggcggtcg cggtgaaggc ggagcgcgcc
     2161 gagttccccg agtgcacccg gacgctgtcc caggtcggcg cccgctggcg ccggctcatc
     2221 gagggagtgc tggaggcagg ccgccagcgg ggagagttcc gggtgtcggg gccgcacacg
     2281 gctcgcgtca tcaccgcgat ggtcatgggc gtcgcggagg gcagccgctg cttcggcacc
     2341 atcgaggcgc cggcctccac ccccgaggag ctctggagcg ccctcgtgag cctgctcgac
     2401 caaggcgtac ttgccgccca aggagaacct cagtaatgcc acggagactt tcacttgcga
     2461 tgctggcgat cgtcgccagc gcgtgcagca atagcaacgc cacgccgccg gccccgccgc
     2521 cccccgaggt cggggtcatc gcggtcgagc cccgcacgct gcccctgacc tacgagtacg
     2581 tcggagaggt gcagccggtg cagcgggtcg aggtccggtc gcgggtggac ggggtgatcg
     2641 aggagcggcc cttcaccgaa ggctcgctgg tgaagcccgg cgcggtgctc taccgcctgg
     2701 agcgggtgcg cttcgaggcg gcctaccgga gcgccggggc acagctcgcc aacgcccggc
     2761 ggctggtggg ccggctggag ccgctcgccg cccgccaagc gatcgcgcag caggacatgg
     2821 acgacgcgcg cgcggcgatg gaggcggcgc aggcggcgta cgaggaggcg cggaaggacc
     2881 ggaacgacgc ggtggttcgc gcggagatcg gcgggcgggt cgggcgcacc cgcctcgagg
     2941 tgggcgcccg ggtgaccggt cccgcagagc tgctcaccac catcgagcag gtgagcccgg
     3001 tgtacgtgac cttccgcccg tcggcccagg accagcaggg gtggcgccag gatccgagca
     3061 gccgagacct gatccgtccc ggcagcgccc tgctggtgaa ggtcgtgctg ccggacggca
     3121 ccgagctgcc gcgcaccggc cgcctcgact acgtgagtcc ctcggtggat ccggggaccg
     3181 gcacgctgga gc
//
LOCUS       DASUYN010000325         2522 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_548417, whole genome shotgun sequence.
ACCESSION   DASUYN010000325 DASUYN010000000
VERSION     DASUYN010000325.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2522)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2522)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2522
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_548417"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..985)
                     /locus_tag="VF061_06370"
     CDS             complement(<1..985)
                     /locus_tag="VF061_06370"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEX6669163.1"
                     /translation="MTVPALPAGRRFVRIKGRRVALGFFFRLRPGDLTDEGAAGRVPD
                     DDAEGKGLPGSASGDPVIAAAGDIACDPGHSEFRNGLGTSSRCRQKFTSDLLVGAGLS
                     AVIPLGDVQYECGTLSEFTRSYGLSWGRVKPITRPVPGNHEYGTPSGCTPGRASGYFG
                     YFGAAAGDPALGYYSYDLGAWHLVALNSNCSIVSCSSSSAQARWLRQDLAAHPARCTL
                     AYWHHPRFTSGSNAPGSNSVLPLYQALYDHGADIVLSGHDHHYERFAPQDPKGSRDVA
                     RGIRQWVVGTGGRNFHPLNSPRPNSELRNNSTFGVLRLTLHPASYDWRFVPI"
     gene            complement(1005..1511)
                     /locus_tag="VF061_06375"
     CDS             complement(1005..1511)
                     /locus_tag="VF061_06375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669164.1"
                     /translation="MAGSTARFTAAALTGAVLVVSPGTAGAESKVTLSPASGGAGMRT
                     AVVGTGFGKRDPVTVTAAGTVVARTRTSRRGWFRASFAVPPRRGGDRFRVVSRSGGRR
                     IVNAFHLSAISDMAEIDSRRGRRVRWTPAAGVAGSAVNLEGSGFPRRAATAHPFRAGG
                     GGGAARRS"
     gene            complement(1783..>2522)
                     /locus_tag="VF061_06380"
     CDS             complement(1783..>2522)
                     /locus_tag="VF061_06380"
                     /inference="COORDINATES: protein motif:HMM:NF012907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyl hydrolase family 18 protein"
                     /protein_id="HEX6669165.1"
                     /translation="GVLHAILTDPAVREATLARLVALVRRHGYEGINIDFENGAATDR
                     AALTAFVTDLAARLHAIGKRISVEVSAKYQHTTTGRSGFYDYEALGAVADTVFVMNWG
                     WHWTTSAPGAPDDLELTRRVADYVASMPNRVRYVLGTHMYGMDWPNGGGPMNRATPLE
                     YAEVMALIARHGATPVLDPASDAWTFKDTDASGAMHEVWYPDAATISRRVGLARERGL
                     GIGFWRLGREDQRVWDDPQIAPGTVWP"
BASE COUNT          357 a          895 c          917 g          353 t
ORIGIN      
        1 cgatcgggac gaagcgccag tcgtagctcg ccggatgcag cgtgagcctg agcactccga
       61 aggtggagtt gttgcgcagc tcgctgttcg gccgcgggct gttcagcggg tggaagttcc
      121 tgccgcccgt ccccaccacc cattgccgga tgccgcgcgc gacgtcgcgg gaccccttcg
      181 ggtcctgggg cgcgaaccgc tcgtagtggt ggtcgtggcc ggacaggacg atgtccgcgc
      241 cgtggtcgta gagcgcctgg tagaggggca gcaccgagtt gctgccgggc gcgttcgacc
      301 ccgacgtgaa cctgggatgg tgccagtagg cgagggtgca cctggcggga tgggcggcaa
      361 ggtcctggcg cagccacctc gcctgcgccg aggaggagct gcagctcacg atcgagcagt
      421 tcgagttgag ggcgaccagg tgccacgcgc ccaggtcgta gctgtagtag ccgagcgccg
      481 gatcgccggc cgcggcgccg aagtagccga agtacccgct cgccctgccc ggggtgcagc
      541 cggacggggt cccgtactcg tgattgcccg gcacgggacg cgtgatcggc ttcacccgcc
      601 cccaggagag cccgtaggac cgcgtgaact cgctgagcgt gccgcactcg tactggacgt
      661 cgccgagcgg gatcaccgcg ctgaggccgg cgccgaccag caggtccgat gtgaacttct
      721 ggcggcagcg gctggaggtc cccaggccgt tcctgaactc ggagtgcccg gggtcgcacg
      781 cgatgtcgcc ggccgccgcg atcacggggt cgccggaggc gctgccggga aggcccttgc
      841 cctcggcgtc gtcgtcgggg acccggcccg ctgcaccctc gtccgtgagg tccccgggcc
      901 ggagccggaa gaagaagccc agcgccacgc ggcggccctt gatcctcacg aacctgcggc
      961 cggcgggcag ggccggaacg gtcaccagcg tcgagaatct gccctcacga tcggcgcgcg
     1021 gcgccgccac ctccaccggc ccgaaacgga tgcgcagtcg ccgcccggcg ggggaagccc
     1081 gaaccctcga ggttcaccgc gctccccgcc acgcccgcgg ccggcgtcca acgcacccgc
     1141 ctcccgcggc gggagtcgat ctcggccatg tcggagatcg cggataggtg aaacgcgttc
     1201 acgatgcgcc gcccgccgct ccgcgagacg accctgaacc ggtctccgcc gcgccggggg
     1261 ggaaccgcga acgacgccct gaaccatccg cgcctgctgg tccgggtgcg ggcgacgacc
     1321 gtcccggcgg cggtgaccgt gaccggatcc cgctttccga agccagtgcc cacgaccgca
     1381 gtccgcatcc cggcgccacc ggaggccggg ctgagcgtca ccttgctctc ggcgcccgcc
     1441 gttccgggag agacgacaag caccgcgccg gtgagcgcgg cggcggtgaa tcgcgctgtg
     1501 ctccctgcca tgtctccccc agccggcagg cgtcgtgccc gcggaaccga ccataagctc
     1561 ttgcaacatc tgttgcaaga gcctcctgca aattgggggt tgcgccccgg tgagcgagtg
     1621 gttaggttcc gcccaacgga gatcgggcgc cggaaccccc cgccgaggcg cggggttcga
     1681 gcatctcgat gagtcccatg gaggggacgg ctgttctcga gagagctacg gatgggaccg
     1741 gcgcagcagg gctgctcaag gcgccccgat ctctggtggg ggtcacggcc agaccgtgcc
     1801 cggcgcgatc tgtgggtcgt cccacacgcg ctggtcctcg cggcccagcc gccagaagcc
     1861 gatgccgagc ccgcgctcgc gcgcgagccc gacgcggcgc gaaatcgtgg ccgcgtcggg
     1921 gtaccagact tcgtgcatcg cgcccgacgc gtccgtgtcc ttgaacgtcc aggcgtcgga
     1981 ggcgggatcg agcacgggcg tggccccgtg ccgtgcgatc agcgccatca cctccgcgta
     2041 ctcgagcggc gtggcccggt tcatggggcc gccgccgttc ggccagtcca tgccgtacat
     2101 gtgcgtgccg agcacgtagc gcacgcggtt cggcatggac gccacgtagt cggcgacccg
     2161 gcgggtcagc tcgaggtcgt ccggggcgcc gggcgcggag gtggtccagt gccaccccca
     2221 gttcatcacg aagacggtgt cggcgaccgc gccgagcgcc tcgtagtcgt agaagcccga
     2281 gcggccggtg gtcgtgtgct ggtacttcgc cgagacctcg accgagatgc gcttgccgat
     2341 cgcgtgcagc cgggccgcaa ggtcggtgac gaacgcggtg agcgcggccc ggtccgtcgc
     2401 ggcgccgttc tcgaagtcga tgttgatccc ctcgtagccg tgtctgcgca ccagtgccac
     2461 cagacgcgcg agggtcgcct cacgcaccgc ggggtcggtg aggatcgcgt gcagcacccc
     2521 cg
//
LOCUS       DASUYN010000326         2252 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_767625, whole genome shotgun sequence.
ACCESSION   DASUYN010000326 DASUYN010000000
VERSION     DASUYN010000326.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2252)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2252)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2252
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_767625"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..245)
                     /locus_tag="VF061_06385"
     CDS             complement(<1..245)
                     /locus_tag="VF061_06385"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX6669166.1"
                     /translation="MSRHIAILPDAVADQIAAGEVVERPASVVKELVENSLDAGARHV
                     RIELENGGKILIEVSDDGCGMGREDAVLALDRHATSKV"
     gene            complement(255..>2252)
                     /locus_tag="VF061_06390"
     CDS             complement(255..>2252)
                     /locus_tag="VF061_06390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="BatD family protein"
                     /protein_id="HEX6669167.1"
                     /translation="LTVDVEPSAAVVATAMNPRLRSLLEQTPPPPRGKAAVALVVSAD
                     SVRIGEQVDVVTAAWFPRDLRLQLRRPPTLQPPVIDGVWSYPQAAPPGIAVTRNIGGV
                     AYDLFVAHQVVFPLVAGTIAIPRAMLKYSTPLALQFFSQEERFALTSLPETLEVRPLP
                     IQGRSADFNGAVGSALKLERRVTPSTAHPGEGVAVELVLSGVGNTALWPPPEIRWPRT
                     ARAYADRVDEQVATVDGRVGGVKTFRYLVVPDSIGPLTLPAVDYPYYDLAAREYRATA
                     VGAASLPVAQGRESATAAALPPALLAAAGPALARRIAEPIPDWAWAVILLLPPFLVIG
                     RPWRRRRRRRDAPLPASGLKGAEEELDAVVRGLVPDPDQRSRAGLAAAVRAAGADADT
                     ARRLAAARERLLARRYGPGVASDEDPALVAEVQELIRRLGASLRGWRGRGAAAGIVVT
                     LLAAGSPAQSPPPERLYETGALRAAAEGFGRRAELDPTVAAHWYNLGASYYRLGLKGH
                     AAAAWQRARRLDPREPSIRRALRLTPPPDATSQRWTWSPPVTSEELLLLGAVMWLAGW
                     VGWVARPRLRDRWTILLVLAAATTSAGFGLRSWYRRPLGIVLDQTTLRISPHGRAPAL
                     GPLESGGAVRILRTDPGWTMVRAAGSREGWVASDAIAAVGG"
BASE COUNT          380 a          782 c          759 g          331 t
ORIGIN      
        1 accttgctcg tggcgtgccg gtcgagcgcc aggaccgcat cttcccggcc catcccgcac
       61 ccgtcgtcgc ttacctctat gaggatcttg ccgccgtttt ccagttctat ccgcacatgg
      121 cgagcgcccg catcgagcga gttctccacc aactccttta ccactgacgc gggccgctcg
      181 actacctcgc ccgcagcaat ctgatcggcc acggcatcgg gcagaattgc gatatggcgg
      241 gacattgcgg aaatctatcc gccgactgcg gcaatcgcgt cggaggcgac ccacccttct
      301 cgtgaccccg ctgcacgcac catcgtccag cccggatcgg tcctcaggat ccgcacggcc
      361 ccgccggatt caagcggtcc caaggccgga gctcgaccgt ggggcgagat gcgcaacgtg
      421 gtctgatcga gaacgatgcc cagcgggcgg cggtaccagg agcgcagtcc gaaaccggcg
      481 gaggtggttg cggccgcaag cacgagcagg atagtccagc ggtcgcgaag cctaggccgt
      541 gccacccagc cgacccagcc cgccagccac atgacagcgc ccaggagcag gagctcctct
      601 gaagttacgg ggggcgacca ggtccagcgc tgggaggtgg cgtcgggcgg aggcgtgagt
      661 cggagcgcgc ggcggatcga gggctcccgg ggatcaagtc gccgggcacg ctgccaggcg
      721 gcggcggcat gacctttcaa acccagccga taataggatg cgccgaggtt gtaccagtgg
      781 gctgcaacgg tgggatcgag ctcggccctg cggccaaacc cttcggcggc tgcgcgcagt
      841 gcacccgttt cgtaaagccg ctcaggcgga ggagactggg ccggcgaccc cgcggcgagg
      901 agcgtcacga ctatgccggc agcggctccc cgcccgcgcc agccgcgcag cgacgcgccc
      961 aggcggcgaa tcagctcctg cacctcggcc acgagcgctg gatcctcgtc cgaggctact
     1021 cctggcccat agcggcgggc aaggagccgt tcgcgagccg cggccagcct gcgggccgtg
     1081 tcggcatcgg cgccggccgc gcgcacggca gcagcaagtc cggcccgcga gcgctgatcc
     1141 ggatcaggca ccagccctcg gacaaccgcg tcgagctcct cttccgcgcc cttgagaccc
     1201 gaagccggaa gtggtgcatc ccggcgccgg cgtcggcgcc gccaaggccg tccgataacc
     1261 aggaacggcg gcagcagcag aatgacggcc caagcccagt cgggtattgg ctcggctatc
     1321 cgtcgcgcca gcgccgggcc cgccgccgcc aggagtgccg ggggcagcgc cgcagccgta
     1381 gccgactcgc ggccttgggc aacgggcagc gaggcggctc ctaccgcggt tgctcgatac
     1441 tcccgtgccg ccagatcgta gtaggggtaa tcgaccgcgg gcagcgtcag gggcccaatg
     1501 gaatcaggaa cgaccaggta tctgaaggtt ttcacgccgc cgacacggcc gtcgacggtg
     1561 gctacctgct catcgacccg gtcggcatag gcccgcgccg ttcggggcca ccgaatctcg
     1621 ggcggcggcc agagcgcggt gttccccacg ccggagagta ccaactccac ggcgacacct
     1681 tcaccaggat gcgcggtcga cggagtgacc cggcgttcga gcttgagagc agatccgacc
     1741 gcgccgttaa agtcagccga tcgcccctgt ataggcagtg gcctcacctc gagcgtctcg
     1801 ggcagactgg tcagggcaaa ccgctcctcc tggctgaaga attggagcgc cagtggcgtg
     1861 ctgtacttca gcattgccct ggggatcgcg atcgttcctg ctaccagcgg gaacacgacc
     1921 tggtgggcga caaacaggtc gtaagccacg cctccaatgt ttcgggtgac cgcgataccc
     1981 gggggcgcag cctggggata gctccacact ccatcgatca ccggaggctg tagcgtgggt
     2041 ggccggcgaa gttgcagccg caagtcgcgc gggaaccagg ctgccgtcac gacgtccacc
     2101 tgttccccga tcctcacact gtcggccgac acgactagtg ctacggctgc cttgccgcgg
     2161 ggtggcggtg gggtctgctc caggaggctg cgtagtcttg ggttcatcgc ggttgccacc
     2221 acagcggcgc tcggttcgac atccaccgtc ag
//
LOCUS       DASUYN010000327         2436 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_106823, whole genome shotgun sequence.
ACCESSION   DASUYN010000327 DASUYN010000000
VERSION     DASUYN010000327.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2436)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2436)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2436
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_106823"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..265)
                     /locus_tag="VF061_06395"
     CDS             complement(<1..265)
                     /locus_tag="VF061_06395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669168.1"
                     /translation="MSRSSLTLVAITLSGVAALGCANDLTQPRFESVRQSADAIVVNQ
                     RTHVVDDATLFGTCTGEMFLVTGVIHERSAVTETATGITHQAIT"
     gene            complement(352..873)
                     /locus_tag="VF061_06400"
     CDS             complement(352..873)
                     /locus_tag="VF061_06400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669169.1"
                     /translation="MFPRNLHRLMLVTAAPVVPILLLATAPAAERTRVEGAFSVSYTQ
                     RRPLPVSDAPGHALVATEGRGTNRSTGATLYMDGAEVRNVEIADLTQGNGPHQGYATF
                     SGQGQETVCKWSGKVTTVLDANGKPLTSFEGTWTRVKGPSGHGTYKGRLTGPDSYLVE
                     WEGEVELTPRAAS"
     gene            1054..1638
                     /locus_tag="VF061_06405"
     CDS             1054..1638
                     /locus_tag="VF061_06405"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX6669170.1"
                     /translation="MEASERAGQGDRQSITDLLLQIRGGDPEALNRLFPLVYAQLRLI
                     AHRQLQAERPGHTLGTTGLVHETYLRLVDQTRVEWRDRGHFFALAARAMRRILVDYAR
                     RYRALRRGGGLQRVAFDEDDTAIAERGETLLALDEALERLAAVNSRLSQVVECRYFGG
                     LTDEETAEALGVTSRTVQRDWAKARGWLYLELHG"
     gene            1663..>2436
                     /locus_tag="VF061_06410"
     CDS             1663..>2436
                     /locus_tag="VF061_06410"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX6669171.1"
                     /translation="MDSPSPERWKEVEPLVDRALELAPGERPAFLDKACSGDPALRAE
                     VTRLLRAAEEATSFLKDPAPAYAAPLLARLSRTEALVSGTRLGYYEVVRELGRGGMAT
                     VYLAHDVHHDRPVALKVLHPELAAALGPERFLREIRTTARLQHPHILPVHDSGETAGL
                     LWYTMPYVEGEGLRDRLRREAQLPLEEAIGIAREVGLALDYAHRHGVVHRDIKPENIL
                     LEDGHAVVADFGVAAAMQIVGEERLTETGRAVGTPAYMSP"
BASE COUNT          388 a          816 c          848 g          384 t
ORIGIN      
        1 acgtgatggc ctggtgggtg atgccggtgg cggtttccgt gacggcgctc ctttcgtgaa
       61 tgacaccagt cactaagaac atctcgccgg tgcatgtccc aaacagagtt gcatcgtcaa
      121 caacatgggt gcgctggttg accacgatgg cgtcggcact ttgcctcaca gactcaaagc
      181 gaggctgggt gaggtcgttg gcacagccga gggccgccac gcccgagagc gtgatagcga
      241 ctagggtgag ggaagaacga gacatggcgg acctccggga acttgaatgg cgaagttgac
      301 tggtgacttc gtttcatcgg gcgccgcgcc gcggcgcgaa ccgccgacac cttagcttgc
      361 cgcgcggggg gtgagctcta cctcgccttc ccactccacc aggtaagaat cgggcccggt
      421 gagccggccc ttgtaggtgc catgcccgct cggccctttc accctggtcc aagtgccctc
      481 gaagctcgtc agcggctttc cattcgcatc gagcacggtc gtgaccttgc cgctccactt
      541 gcagactgtt tcctggcctt gcccggagaa ggtggcgtac ccctggtggg gaccgttgcc
      601 ctgcgtgagg tcggcgattt cgacgttccg aacctcggca ccgtccatgt agagggtggc
      661 gccggtgctt cgattggttc ctctgccttc ggtcgcgacg agcgcgtggc ccggggcgtc
      721 ggagaccggg agtgggcgac gctgggtgta actcacactg aaggccccct cgactcgcgt
      781 ccgttcggcc gccggcgcgg tagccaggag aagaatgggc acgaccggag cggccgtgac
      841 cagcatgagg cggtgcaggt tgcgcgggaa catggcgagc tcctccgatg tggggtgatg
      901 gctgcgtgcg ctggtagacg cgcgaaacca tccggaactc cgacatcccc tgctcgcgcg
      961 gttgcggccc acggcccggg gcggcatctt gaacctggta tcctcaatcc ccgcaccgcc
     1021 cgggcgcggc acccggcccg ggcacccgac cctatggaag ccagcgaacg ggcgggccag
     1081 ggcgatcgcc agtcgatcac cgacctcctc ctgcaaatcc gtggcggcga ccccgaggcc
     1141 ctgaaccgcc tcttcccgct ggtctacgcg cagttgcgat tgatcgccca tcgacagctc
     1201 caggccgaac gccccggcca taccctcggc accacaggcc tcgtccacga gacctatctc
     1261 aggctggtcg accagacccg tgtggaatgg cgggatcgcg gccatttctt cgcgttagcc
     1321 gcacgcgcca tgcgacgcat tctggtcgac tacgcccgcc gataccgcgc cctgcgacgc
     1381 ggtggcgggc tgcagcgcgt ggccttcgac gaggacgaca cggcgatcgc cgagcggggc
     1441 gagacgttgc tggcgctcga cgaggcactg gagcggctgg ccgccgtcaa cagccggctg
     1501 agtcaggtcg tcgaatgccg ctacttcggc gggctgacgg acgaggagac cgcggaagct
     1561 ctgggagtga cttcgcggac cgtccagagg gactgggcca aggcccgggg ctggctgtac
     1621 ctggagctgc acggctgagc gccgccgcga acggagtgcc ggatggattc accatcaccg
     1681 gaacggtgga aggaagtcga gcccctggtc gaccgggcgc tggagctggc gccaggagag
     1741 cggcccgcgt tccttgacaa ggcctgctcc ggggatcctg cgctccgggc ggaagtcacc
     1801 cgcctgctcc gcgctgccga ggaggcgacc agctttctga aggaccctgc tccagcctac
     1861 gccgcgccgt tgctggcacg gttgtcccgg accgaggcgc tcgtctcggg cactcgactg
     1921 ggctactacg aggtcgtgcg cgagctgggc cggggcggga tggccacggt ctacctcgcc
     1981 catgacgtcc accacgacag accggtggcg ctgaaggtgc tgcacccgga actggccgcc
     2041 gctctcggcc ccgaacggtt cttgcgcgag atccgcacga cggcgcggct ccagcacccg
     2101 cacatcctgc cggtacacga ctccggcgag accgcgggcc tactctggta cactatgccg
     2161 tacgtagagg gcgaggggct acgggaccgg ctgaggcgcg aggcccaact gccgctcgag
     2221 gaggcgatcg ggatcgcgcg ggaggtgggg ctcgccctgg actacgccca ccggcacggg
     2281 gtggtgcacc gcgacatcaa gccggagaat atcctgctcg aggacggcca cgcggtggtc
     2341 gccgacttcg gcgtggccgc cgcgatgcag atcgtcggcg aggagcggct caccgagacg
     2401 ggccgcgcgg tcggcacgcc ggcctacatg agcccc
//
LOCUS       DASUYN010000328        10706 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1871777, whole genome shotgun sequence.
ACCESSION   DASUYN010000328 DASUYN010000000
VERSION     DASUYN010000328.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10706
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1871777"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1469
                     /locus_tag="VF061_06415"
     CDS             <1..1469
                     /locus_tag="VF061_06415"
                     /inference="COORDINATES: protein motif:HMM:NF012356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HEX6669172.1"
                     /translation="QALMAAYGQPHGVTHSDRDYRVRADRREAGFAAWYEFFPRSATS
                     DAARPGTFRDAERALPRIAALGFDVVYLPPIHPIGRTHRKGPNNTLVAGPNDPGSPWA
                     IGNEHGGHTAVNPELGTLADFRRFVQAARSQGMEVALDYALQCSPDHPWVRQHPEWFF
                     IRPDGTIKYAENPPKKYEDIYPINFWCDQREALWDACRDIFLFWVGQGVRTFRVDNPH
                     TKPFAFWEWVIGEVQREHPDVVLLSEAFTRPKRMQTLARLGFTQSYTYFTWRNSAAEL
                     REYLSELTQPAMADFFRPNFFANTPDILHEFLQRGGRPAFRIRLFLAGTLAPLYGIYS
                     GFELSENVPVREGSEEYLDSEKYQVWVRNWSAPGNLDADITRLNQVRRAEPALQALTN
                     LSFHPASHPDVLFYLKGAWGRDLLCAVSVNPEEVVSAELELPLERLGLGPEDGFEVED
                     LLTGERQRWQGAGQEVRFDPTERPGFIWRVIRDGGGAG"
     gene            1466..4786
                     /gene="treS"
                     /locus_tag="VF061_06420"
     CDS             1466..4786
                     /gene="treS"
                     /locus_tag="VF061_06420"
                     /EC_number="5.4.99.16"
                     /inference="COORDINATES: protein motif:HMM:TIGR02456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047471 - maltose
                     alpha-D-glucosyltransferase activity [Evidence IEA];
                     GO_process: GO:0005991 - trehalose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="maltose alpha-D-glucosyltransferase"
                     /protein_id="HEX6669173.1"
                     /translation="MTDESGWYRDAIIYQLHIRAFRDSDADGIGDFAGLTEKLDYLRD
                     LGVTAVWLLPFYPSPLKDDGYDIADYTDVNPSYGTLQDFKIFLREAHRRDLKVITELV
                     INHTSDQHPWFQRSRRARPGSRAREFYVWSPTPDRYTDARIIFKDFERSNWTWDAEAG
                     AYYWHRFYSHQPDLNFDNPTVHKATFAALDFWLRMGVDGLRLDAVPYLYEREGTSCEN
                     LPETHAFLKDLRRRLDAKYEHRMLLAEANQWPEDAVAYFGNGDECHMAFHFPVMPRLF
                     MAVQMEDRFPVIDILQQTPPIPETAQWAVFLRNHDELTLEMVTDEDRDYMYRFYASDP
                     QARINLGIRRRLAPLMGNDRRRIELMNALLFSLPGTPVVYYGDEIGMGDNIYLGDRNG
                     VRTPMQWSPDRNAGFSQANPQKLYSPVIIDPEYHYEALNVDAQQNNPHSLLWWMKHII
                     GLRRQYRAFGRGTLRFLLPDNPRVLAFVREYEDERILIVANLSRYAQAVQLDLADLQG
                     VTPVEMFGRTPFPAVGQAPYTVTLNPYAFYWFLLPVATAAARRDTRVVQVPAVSFSGN
                     WQELVLGDEREVLGELLPTYLRESRWFRGKARQITSVAVTRTIPVPVDERDVLMTVVE
                     VRYLDADPEQYVVPLGYAEGDRAREIKVRAPGAVLLSRVGGGVVYDAMADEGFVNALV
                     DGIGRRKRWRGLKAELVATRTRAYPLLRGEDEALRATLLRGEQSNTSVNLGDRLLFKL
                     FRKAEPGLNPDLELGRYLTEKTEFRRVPQLAGGLELRVRHQEPITLGVLHQFLPSEGD
                     AWTFTLNALNRFLERAVVSPTAPSEAELMPVSLPELARLDPPAILEEMAGGYLPQARL
                     LGQRTAEFHLALASDREDPAFAPEAFTGLYRRSIYQSLRANARTTFDLLRRRLSTLPE
                     TVREEARVVTALEDHLLRQARAVMDRKIPMARFRIHGDYHLGQVLYTGKDFVIVDLEG
                     EPSRSISERRFKRSPLRDLAGMIRSFEYAAAYAVRHGPMRIDDIPALLPWARLWQRWA
                     SASFLRGYFEASGDAPYLPKGADAFSAMLDFYLLDKAIYELRYELNNRPEWVPIPLEG
                     VRRLLESEFPWPVGAGAR"
     gene            4783..6990
                     /gene="glgB"
                     /locus_tag="VF061_06425"
     CDS             4783..6990
                     /gene="glgB"
                     /locus_tag="VF061_06425"
                     /EC_number="2.4.1.18"
                     /inference="COORDINATES: protein motif:HMM:NF008967.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003844 - 1,4-alpha-glucan branching
                     enzyme activity [Evidence IEA];
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0043169 - cation binding [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0005978 - glycogen biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching protein GlgB"
                     /protein_id="HEX6669174.1"
                     /translation="MSRSTARPPFAVDPAELASLATGRHADPHRVLGAHPARGGVVVR
                     ACHPDATAAECVPADGAPVAMRPLQAAGYFGAFLDGRSLPLRYRLRFHFAGGRVWEQE
                     DPYRFLPSLGEMDVYLISEGTHRALWQAMGAHPRQLDGVDGVGFAVWAPNAQGVSVVG
                     DFCRWDERRLPMRRLGSSGVYELFVPGVWAGALYKYRIVGPGGEIRLKADPFAQAMEL
                     PPSTASRVAASSYQWGDGEWMAQRPSRDLHRSPVAIYEVHLGSWARILEEGNRPLTYR
                     EIAPRLIEHVRRLGFTHVEFMPLAEHPFTGSWGYQVSAYFAPTARYGTPDDLRYLIDA
                     CHCAGIGVIMDWVPAHFPKDDFALRLFDGTALYEHQDPRRGEHPEWGTLIFNYGRREV
                     RNFLVANALYWLREFHVDGLRVDAVASMLYLDYSRAEGQWLPNRYGGREDLEAVEFLQ
                     QLNATIAEEQPGCFTVAEESTSWPRVTGPVNEGGLGFTFKWNMGWMHDTLDYFAKDPV
                     HRRFHHERLTFGMMYEYSEHFIMPLSHDEVVHGKGTLVGKMPGDEWQRFANLRTLLAY
                     QYTRPGKPLLFMGSELGSYREWNHDTSLDWHLESQPLQGGLGRFLGDLGAVYRERSEL
                     WRSDPDLEGFRWLDADDRDRSVYAYLRRDGDQVLIVLLNLTPVPRPDYRTGAPLPGRY
                     GIVLSSDDPRYGGSGYGLAGELHTDPEPWQHQPVSLRVPLPPLGAVLLAHQSR"
     gene            6987..8807
                     /gene="treZ"
                     /locus_tag="VF061_06430"
     CDS             6987..8807
                     /gene="treZ"
                     /locus_tag="VF061_06430"
                     /inference="COORDINATES: protein motif:HMM:TIGR02402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malto-oligosyltrehalose trehalohydrolase"
                     /protein_id="HEX6669175.1"
                     /translation="MTLRRGAVPQPDGSTRFEVWAPSAETVEVAISRAGKVHTVPLAR
                     GADGVHRGTVPKVSAGTDYSYRLDGGPDRPDPVSRWRPAGVHGPTRVVDPGAFEWSDA
                     GWRGLEMADLVIYELHVGTFSSAGTFDGVIERLPALRELGITAIEIMPVSEFPGGRNW
                     GYDGVSPYAVQSTYGGPDGLKRLVDAAHRAGLAVLLDVVYNHLGPEGNYLREFGPYFS
                     DRYRTAWGEGLNLDGPDSDEVRRYVVDNAVYWVTEYHLDGLRLDAVDRVVDLSPVHIA
                     AELGAAVHAQGVALGRRTLVIAEIDANDPKWVRGPEVGGYGLDAHWSDDFHHAVHVAL
                     TGERGGYYTDFTDPGAVAQVLDRRYVNDGRYSPHRRRRHGRPAVDVPADRFVVAIQNH
                     DQTGNRARGERLSTLVSPAALRLAAALLLLSPYVPLLFMGEEHGETNPFLYFVSHGDA
                     ALVEAVRKGREEEFASFAWAGEVPDPQAEATFEASRPRWDRAESGDGARMLALYRELL
                     RVRRTELALRPGAATVGVRGDDAAGWVAVRYDEEETVLAAVFNLSPDGRTVPLEAADD
                     WGLALATDAPAYGGRGESAVAGRELRLAGHTAVLLRRAGA"
     gene            8804..>10706
                     /gene="glgX"
                     /locus_tag="VF061_06435"
     CDS             8804..>10706
                     /gene="glgX"
                     /locus_tag="VF061_06435"
                     /inference="COORDINATES: protein motif:HMM:TIGR02100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004133 - glycogen debranching enzyme
                     activity [Evidence IEA];
                     GO_process: GO:0005980 - glycogen catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching protein GlgX"
                     /protein_id="HEX6669176.1"
                     /translation="MRVWPGSPSPLGATWDGEGTNFAIFSEHATAVDLCLFRHPEDAQ
                     DAARVRLRERTDQIWHAYLPEVRPAQLYGFRVHGPYAPEDGHRFNPAKLLLDPYAKAI
                     SGTIRWSDALSGYSMSPPMETRDLVPDGADSAGGLPKSVVVESAFSWGDDKHPRTPWN
                     RTVIYEAHVKGMTMLHPDVPEEIRGTYLGLATDPIIDHLLALGVTAIELLPVHHFVTE
                     RRLAEMGLVNYWGYATIGFFAPDVRYATGGLGQQVAEFKSMVKRFHRAGIEVILDVVY
                     NHTAEGNHLGPTLSFRGIDNSAYYRLEPNRRFYTDWTGTGNTVDIRHSRTMQLVMDSL
                     RYWVTDMHVDGFRFDLAPVLARGDLNVSPFAEFFDVVRQDPVVSKVKLIAEPWDLGPD
                     GYQVGRFPIGWGEWNGKYRDTARKFWRGDPGQVGEFASRLAGSSDLFEHSQRSPQGSV
                     NFVTVHDGFTLHDLVSYETKHNEANGEDNRDGSDDNQSRNWGAEGPTEAVHVIRMRER
                     IKRNFIATLAFSQGVPMISHGDEVGRTQQGNNNAYCQDGPLTWIDWRLTPLQRQLLNF
                     TRTAFAIRAANPVLRRRNYFRHQPDHPGGLKDLTWLRPDGNEMTEADWADATNHVLGM
                     LILGEATDEI"
BASE COUNT         1603 a         3833 c         3682 g         1588 t
ORIGIN      
        1 tgcaggctct gatggccgcc tacgggcagc cccatggggt cacccactcc gatcgggact
       61 accgggttcg ggccgaccgg cgcgaggcgg gcttcgccgc ctggtacgaa ttctttcccc
      121 gttcggccac cagcgacgcg gcgcgtcccg gcaccttccg cgacgccgag cgcgcgctgc
      181 cccgcatcgc ggcgctcggc ttcgacgtcg tgtatctgcc gccgatccac cccatcggcc
      241 gcacccaccg gaagggcccc aacaacaccc tcgtcgccgg gccgaacgac ccgggcagtc
      301 cgtgggcgat cggcaacgag cacggcggcc acaccgcggt caatccggag ctgggcacgc
      361 tggccgactt ccgccgcttc gtccaggcgg cgcgctcgca gggcatggaa gtggccctgg
      421 actacgcgct acagtgctcc cccgaccatc cctgggttcg ccagcacccc gagtggttct
      481 tcatccgccc cgacggtacc atcaagtacg ccgagaaccc gcccaagaag tacgaggaca
      541 tctaccccat caacttctgg tgcgaccagc gcgaggcgct ctgggacgcc tgccgcgaca
      601 tcttcctgtt ctgggtcggg cagggggtgc gcaccttccg ggtggacaac ccgcacacca
      661 agccgttcgc gttctgggaa tgggtcatcg gcgaggtgca gcgggagcac cccgacgtcg
      721 tccttctctc cgaggccttc acccgaccca agcggatgca gactctggcc cggctcgggt
      781 tcacccagtc ctacacctat ttcacctggc gcaattcggc ggcggagctg cgggagtacc
      841 tctccgagct gacccagccg gcgatggcgg acttcttccg gcccaacttc ttcgccaaca
      901 cgcccgacat cctgcacgag ttcctccagc gcggcggccg gccggccttc cgcatccggc
      961 tgttcctcgc cgggaccctc gcgccgctgt acggcatcta cagcgggttc gagctgagcg
     1021 agaacgtgcc ggtgcgggag ggcagcgagg aatatctcga ctcggagaag taccaggtgt
     1081 gggtccgcaa ctggagcgcg ccggggaacc tggacgccga catcacccgg ctgaaccagg
     1141 tccgccgcgc cgagcccgcg ctgcaggcgc tcaccaacct cagcttccac cccgcgagcc
     1201 acccggacgt cctcttctac ctgaagggcg cctggggccg cgatctcctg tgcgcggtgt
     1261 cggtgaaccc ggaggaggtc gtcagcgcgg agctggagct cccgctggag cggctgggcc
     1321 tcgggcccga ggacgggttc gaggtggagg atctgctgac gggcgagcgg cagcgctggc
     1381 agggcgcggg acaggaggtg cggttcgatc cgaccgagcg gccgggattc atctggcgag
     1441 tgatccgcga cgggggaggt gcggggtgac cgacgaatcg ggctggtacc gggacgccat
     1501 catctaccag ctgcacatcc gggccttccg cgacagcgac gcggacggga tcggcgattt
     1561 cgccgggctc accgaaaagc tcgactacct gcgggatctc ggggtgacgg cggtgtggct
     1621 cctgccgttc tatcccagcc cgctcaagga cgacggctac gacatcgccg actacaccga
     1681 cgtgaacccg tcgtacggca ccctccagga cttcaagatc ttcctgcgcg aggcccaccg
     1741 gcgcgacctc aaggtcatca ccgagctggt catcaaccac acctccgatc agcacccctg
     1801 gttccagcgc tcccgccggg cgcggcccgg gtcgcgcgcc cgcgagttct acgtgtggag
     1861 cccgacgccg gatcgctaca ccgacgcccg gatcatcttc aaggacttcg agcgctccaa
     1921 ctggacctgg gatgcggagg cgggggccta ctactggcac cggttctact cccaccagcc
     1981 cgacctcaac ttcgacaacc cgacggtcca caaggccacc ttcgccgcgc tggacttctg
     2041 gctccgcatg ggggtggacg ggctccggct ggacgcggtc ccctacctgt acgagcgcga
     2101 aggcaccagc tgcgagaacc tccccgagac ccacgccttc ctgaaggacc tgcgtcgccg
     2161 gctggacgcc aagtacgagc accggatgct gctggcggag gccaaccagt ggcccgagga
     2221 tgccgtcgcc tacttcggca acggcgacga gtgccacatg gccttccact tcccggtcat
     2281 gccacggctc ttcatggcgg tccagatgga ggaccggttc ccggtcatcg acatcctcca
     2341 gcagacgccg ccgattcccg agaccgcgca gtgggccgta ttcctccgga accacgacga
     2401 gctcactctg gagatggtga ccgacgagga ccgggactac atgtaccgct tctacgccag
     2461 cgacccgcag gcgcggatca acctcggcat ccgccgccgg ctggccccgc tgatggggaa
     2521 cgaccgccgg cggatcgagc tgatgaacgc gctgctcttc tcgctgcccg gcacgccggt
     2581 ggtctactac ggcgacgaga tcggcatggg cgacaacatc tacctcggcg accggaacgg
     2641 tgtccgcacg ccgatgcagt ggagccccga ccgcaacgcg ggcttctccc aggccaaccc
     2701 ccagaagctg tactcgccgg tcatcatcga cccggaatac cactacgagg cgctgaacgt
     2761 cgatgcccag cagaacaacc cgcactcgct gctctggtgg atgaagcaca tcatcggcct
     2821 gcggcggcag taccgggcct tcggccgggg gaccctgcgg ttcctcctgc cggacaaccc
     2881 gcgcgtcctc gccttcgtcc gcgagtacga ggacgagcgc atcctgatcg tggccaacct
     2941 ctcgcgctac gcccaggcgg tgcagctgga cctggccgac ctgcagggcg tgaccccggt
     3001 ggagatgttc ggccgcacgc cgtttcccgc cgtcggccag gcgccctaca cggtgaccct
     3061 caacccctac gcgttctact ggttcctgct gccggtggcc acggcggcgg cgcggcgcga
     3121 cacccgggtg gtccaggtgc ccgccgtcag cttctccggg aactggcagg agctggtgct
     3181 gggcgacgag cgcgaggtgc tgggggagct gctcccgacc tacctgcgcg agagccggtg
     3241 gttccgcggg aaagcccggc agatcacctc ggtggcggtg acccgcacca tcccggtgcc
     3301 ggtggacgag cgcgacgtcc tcatgacggt ggtcgaggtg cgctacctcg acgccgaccc
     3361 ggagcagtac gtcgtccccc tcggttacgc cgagggcgac cgggcccggg agatcaaggt
     3421 gcgcgcgccc ggggcggtcc tcctctcccg ggtgggcggt ggcgtggtgt acgacgccat
     3481 ggcggacgag gggttcgtga acgcgctggt ggacgggatc ggacgccgga agcgctggcg
     3541 tggcctcaag gcggagctgg tcgccacgcg tacccgcgcc tatccgctgc tccggggaga
     3601 ggatgaggcg ctccgggcca ccctgctccg gggtgagcag tcgaacacct ccgtgaacct
     3661 gggcgaccgg ctgctgttca agctcttccg gaaggcggag ccgggcctga atccggacct
     3721 ggagctgggc cgctatctca cggagaagac cgagttccgc cgcgtccccc agctggccgg
     3781 tggcctcgag ctccgggtcc gccaccagga gccgatcacc ctcggcgtgc tgcaccagtt
     3841 cctgcccagc gagggtgacg cctggacctt caccctgaac gcgctcaacc ggttcctgga
     3901 gcgcgcggtg gtgtcgccga ccgcaccgag cgaggccgag ctgatgccgg tatcgctccc
     3961 cgagctcgcc cggttggacc cgccggcgat cctggaagaa atggccggcg gctacctgcc
     4021 gcaggcccgc ctgctcggcc agcgcacggc cgagtttcat ctcgccctcg cgtccgaccg
     4081 cgaggacccc gccttcgcgc ccgaggcgtt caccgggctg taccgacgct cgatctatca
     4141 gtcgctgcgc gcgaacgcga ggaccacgtt cgacctcctc cgccgtcgcc tgagcacgct
     4201 gccggagacg gtgcgggagg aggctcgggt ggtgacggcg ctggaggatc acctgctccg
     4261 ccaggcgcgc gcggtgatgg accgcaagat ccccatggcg cggttccgga tccatggcga
     4321 ctaccacctg ggccaggtgc tctacaccgg caaggacttc gtcatcgtgg acctggaggg
     4381 cgagcccagc cggagcatca gcgagcggcg cttcaagcgc tcgcccctgc gcgatctggc
     4441 cggcatgatc cgctccttcg agtacgcagc ggcctacgcc gtgcggcatg gcccgatgcg
     4501 gatcgacgac attcccgccc ttctgccctg ggcgcggctc tggcagcgct gggcgtcggc
     4561 cagcttcctc cggggctact tcgaggcctc cggcgacgcg ccctacctcc ccaagggcgc
     4621 ggacgcgttc tccgccatgc tggacttcta cctgctggac aaggccatct acgagctgcg
     4681 ctacgagctc aacaaccggc ccgagtgggt ccccattccg ctcgagggcg tccgccgcct
     4741 cctggagagc gagttcccct ggccggtcgg agcgggcgca cgatgagccg gagtaccgcc
     4801 cgtccgccgt tcgccgtgga cccggccgag ctggcttccc tcgccacggg acggcacgcg
     4861 gacccgcacc gggtcctcgg ggcgcacccg gcgcggggcg gggtggtggt gcgcgcctgt
     4921 catccggacg ccacggccgc ggaatgcgtg ccggccgatg gcgcgccggt ggccatgcgg
     4981 ccgctgcagg cggcgggcta cttcggcgct tttctggacg gccgctcgct cccgctccgg
     5041 taccgtctcc gcttccattt cgcgggtggg cgcgtgtggg agcaggagga tccctaccgc
     5101 ttcctgccgt cgctggggga gatggacgtc tacctgatct ccgaaggcac ccaccgcgcc
     5161 ctctggcagg cgatgggggc ccatccgcgg cagctggacg gggtggatgg cgtcggattc
     5221 gcggtgtggg ctccgaacgc gcagggcgtg agcgtcgtgg gcgacttctg tcgctgggac
     5281 gagcgccggc tgccgatgcg gcggctgggc tcgtccgggg tgtacgagct gttcgtgccg
     5341 ggggtgtggg caggggcgct gtacaagtac cggatcgtcg gccccggggg cgagatccgc
     5401 ctcaaggcgg atccgttcgc gcaggcgatg gagctcccgc cgagcaccgc gtcgagggtc
     5461 gcggcctcct cctaccagtg gggcgacggc gagtggatgg cgcagcgccc ctcgcgggac
     5521 ctgcaccgct ccccggtggc gatctacgag gtccacctcg ggtcctgggc ccggattctg
     5581 gaggaaggga accgtccgct cacctatcgg gagatcgccc cccggctgat cgagcacgtg
     5641 cgccgcctcg gcttcaccca cgtcgagttc atgccgctcg cggagcatcc cttcaccggg
     5701 tcgtggggct accaggtcag cgcctatttc gcgccgaccg cgcggtacgg cacgccggac
     5761 gatctccgct acctgatcga cgcctgccac tgcgccggca tcggcgtgat catggactgg
     5821 gtgccggcgc acttccccaa ggacgacttc gccctccgcc tcttcgacgg gacggcgctc
     5881 tacgagcacc aggatccgcg gcgcggcgag caccccgagt ggggcacgct gatcttcaac
     5941 tacggccggc gcgaggtgcg gaatttcctc gtcgccaacg cgctctactg gctgcgcgag
     6001 ttccacgtgg acgggctccg ggtggacgcg gtcgcctcca tgctctacct ggactacagc
     6061 cgtgccgagg gccagtggct tcccaatcgg tatggcgggc gagaagacct cgaggcggtg
     6121 gagttcctgc agcagctcaa cgccacgatc gccgaggagc agccgggctg cttcaccgtg
     6181 gcggaggagt ccacctcctg gccccgggtc accggccccg tcaacgaagg cgggctcggc
     6241 ttcaccttca agtggaacat ggggtggatg cacgacaccc tggactactt cgccaaggac
     6301 ccggtgcacc gccgcttcca ccacgagcgg ctcacgttcg ggatgatgta cgagtacagc
     6361 gagcacttca tcatgccgct gtcgcacgac gaggtggtgc acggcaaggg gaccctggtg
     6421 ggcaagatgc cgggcgacga atggcagcgc ttcgccaacc tgcgcaccct cctggcctac
     6481 cagtacaccc ggccggggaa gccgctgctc ttcatgggca gcgagctcgg ctcctaccgc
     6541 gagtggaacc acgacaccag cctggactgg cacctcgaga gccagccgct gcagggcggc
     6601 ctgggccgct tcctcggcga tctgggcgcg gtctaccggg agcgctccga gctctggcgg
     6661 agcgatccgg atctggaggg cttccgctgg ctcgacgccg acgatcgcga tcgatccgtc
     6721 tacgcctacc tccgccggga tggagaccag gtgctgatcg tgctgctgaa cctcacgccg
     6781 gtcccgcgac ccgactaccg gaccggcgcc ccgctgccgg gtcgctacgg catcgtgctg
     6841 tccagcgacg accccaggta cggaggcagc ggctacggcc tggccgggga gctgcacacg
     6901 gacccggagc cgtggcagca ccagcccgtc tccctgcgcg ttccgcttcc cccgctgggc
     6961 gccgtgttgc tggcgcacca gtcccggtga cgctccggcg cggcgccgtc ccccagcccg
     7021 acggcagcac caggttcgaa gtgtgggcgc ccagcgcgga gaccgtcgag gtcgcgattt
     7081 cgcgcgccgg gaaggtgcac accgtcccgc tggcgcgcgg ggccgacggc gttcaccgcg
     7141 gcacggtgcc gaaggtgtcc gcgggcaccg actacagcta ccggctcgat ggaggtcccg
     7201 accggcccga tcctgtgagc cgctggcggc ccgccggggt gcacggcccg acccgggtgg
     7261 tggaccccgg tgccttcgag tggtccgacg ccggctggcg aggcctcgag atggccgacc
     7321 tcgtgatcta cgagctccac gtcggcacct tcagctccgc cggcaccttc gacggagtga
     7381 tcgagcggct cccggcgctc cgggagctcg gcatcaccgc catcgagatc atgccggtct
     7441 ccgagttccc gggcggccgc aactgggggt acgatggggt ctcgccctac gcggtgcaga
     7501 gcacctacgg cggacccgac gggctgaagc gactggtgga cgcggcccat cgcgcggggc
     7561 tggccgtgct gctcgacgtc gtgtacaacc acctcggtcc cgaggggaac tacctgcgcg
     7621 agttcggccc ctacttctcc gaccggtacc gcaccgcgtg gggcgagggc ctcaacctcg
     7681 acggccccga cagcgacgag gtgcgccgct acgtggtgga caacgcggtg tactgggtga
     7741 ccgagtacca tctcgacggc ctccggctgg acgcggtcga ccgggtcgtg gacctgagcc
     7801 cggtccacat cgcggcggag ctcggtgccg cggtacatgc gcagggtgtg gcgctgggtc
     7861 ggcggacgct ggtgatcgcc gagatcgacg ccaacgatcc gaagtgggtg cggggccccg
     7921 aggtgggggg gtacgggttg gacgcccact ggtcggacga tttccaccac gcggtccatg
     7981 tggcgctcac cggggagcgc ggcgggtact acaccgactt caccgacccg ggcgccgtgg
     8041 cccaggtcct cgaccggcgc tacgtcaacg acggacggta ttcgccgcac cgccgccggc
     8101 ggcacggccg ccccgccgtc gacgtgccgg ccgaccggtt cgtcgtcgcg atccagaacc
     8161 acgaccagac cggtaaccgt gcccgcggcg agcggctctc gaccctggtc tctcccgccg
     8221 cgctgcggct cgcggccgcg ctgctgctgc tctcgccgta cgtcccactc ctcttcatgg
     8281 gcgaggagca cggggagacg aaccccttcc tctatttcgt gagccacggg gacgcggcgc
     8341 tcgtcgaggc ggtccggaag ggacgggagg aggagttcgc ctcgttcgcc tgggcgggcg
     8401 aggtgcccga tccgcaggcg gaggcgacct tcgaggcctc gcggccgcgc tgggaccggg
     8461 cagagtcggg ggacggggcc aggatgctgg cgctgtaccg cgagctgctc cgggtccggc
     8521 ggaccgagct ggccctgcgg cccggcgcgg ccacggtagg ggtgcgcggc gacgacgcgg
     8581 ccggctgggt ggccgtgcgc tacgacgagg aggagacggt gctggcagcg gtgttcaacc
     8641 tgtcgccgga cggccggacg gttcccctgg aggccgcgga cgattggggc ctcgcacttg
     8701 ccaccgacgc gccggcgtac ggcggacgcg gggagtccgc tgtcgccggt cgggagctcc
     8761 ggctggcggg tcacaccgcg gtgctgctgc ggagggccgg cgcatgaggg tctggccggg
     8821 ctccccctcg ccgctcggag ccacctggga cggcgagggc accaatttcg ccatcttctc
     8881 ggagcacgcc accgcggtgg acctctgcct cttccgccac ccggaggacg cgcaggacgc
     8941 ggcccgcgtc cggctgcgcg agcgcaccga ccagatctgg cacgcgtacc tgcccgaagt
     9001 gcgaccggcg cagctctacg gcttccgggt gcacggaccg tacgcgccgg aggacggcca
     9061 ccgcttcaac cccgccaagc tgctgctcga tccctacgcc aaggccatca gcggcacgat
     9121 ccgctggagc gacgcgctgt ccggctattc catgtctccg ccgatggaga ccagggacct
     9181 ggtgcccgac ggcgcggaca gcgcgggcgg gctgcccaag agtgtcgtgg tggagtccgc
     9241 cttcagctgg ggcgacgaca agcatccccg caccccctgg aaccgcaccg tcatctacga
     9301 ggcgcacgtg aaggggatga cgatgctgca tcccgacgtg cccgaggaga tccgcggcac
     9361 ctacctggga ctcgccaccg atccgatcat cgatcacctc ctcgccctcg gcgtgacggc
     9421 catcgagctg ctgccggtgc accacttcgt caccgagcgc cgactcgcgg agatggggct
     9481 ggtcaactac tggggctacg ccaccatcgg gttcttcgcg cccgacgtgc gctacgccac
     9541 gggggggctg ggccagcagg tggccgagtt caagtccatg gtgaagcgct tccaccgcgc
     9601 cgggatcgag gtgatcctcg acgtggtcta caaccacacc gcggagggca accacctcgg
     9661 cccgacgctg agcttccgcg gcatcgacaa ctcggcctac taccgcctgg agccgaaccg
     9721 ccgtttctac accgactgga ccggcaccgg caacacggtg gacatccgcc attcccggac
     9781 catgcagctg gtgatggaca gcctgcgcta ctgggtgacg gacatgcacg tggacgggtt
     9841 ccgcttcgac ctggcacccg tcctcgcccg cggtgacctg aacgtcagcc ccttcgccga
     9901 gttcttcgac gtggtgcggc aggatcccgt ggtgtccaag gtgaagctga tcgccgagcc
     9961 ctgggacctc ggccccgacg gctaccaggt gggccgcttc cccatcggct ggggcgagtg
    10021 gaacgggaag tatcgcgata ccgcccggaa gttctggcgg ggagatccgg ggcaggtggg
    10081 cgagttcgcc tcccggctcg cggggagcag cgacctgttc gagcacagcc agcggagccc
    10141 gcaggggagc gtcaacttcg tcacggtgca cgacgggttc accctgcacg acctggtgag
    10201 ctacgagacc aagcacaacg aggccaacgg ggaggacaac cgcgacggga gcgacgacaa
    10261 ccagagccgc aactggggcg ccgagggacc gaccgaggcg gtgcacgtca tccggatgcg
    10321 ggagcggatc aagcgaaact tcatcgcgac gctggccttc tcccaggggg tgccgatgat
    10381 ctcccacggc gacgaggtcg gccgcaccca gcaggggaac aacaacgcct actgccagga
    10441 cggcccgctg acctggatcg actggcggct cacccccctg cagcggcagc tgctgaactt
    10501 cacccgcacc gccttcgcca tccgggccgc caacccggtg cttcggcggc ggaactactt
    10561 ccgccatcag ccggaccatc ccggtggcct caaggacctg acctggcttc ggcccgacgg
    10621 caacgagatg accgaggccg actgggccga cgccaccaac cacgtgctcg ggatgctgat
    10681 cctgggtgaa gccaccgacg agatcg
//
LOCUS       DASUYN010000329         7445 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1211545, whole genome shotgun sequence.
ACCESSION   DASUYN010000329 DASUYN010000000
VERSION     DASUYN010000329.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7445)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7445)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7445
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1211545"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1234)
                     /locus_tag="VF061_06440"
     CDS             complement(<1..1234)
                     /locus_tag="VF061_06440"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX6669177.1"
                     /translation="MSKLLILFVTAFVDMVGLTMIVPLLPYYATDFGAEAATVGVLIS
                     AFSVAQLAVAPVWGRVSDRYGRRPAILAGLLITAAADVLFAFAGSVPALLMARLVQGV
                     GGGTIGVVQAYVADVSSPEQRTKSLGWLSAITSLGAVAGPAVGSLLVSLGGLEFVGLG
                     AAGIALLVALFAWLYLTESRRFLTPGGLAAATTSGRAAIAHVLSRWHETAPRLIWIYA
                     VGIGAFYGTIQIVPLLLADRLGVTEHTVGYFVMYMGGMGVVVRTLILGRAVDALGEAR
                     LARVGIVVLAAGLAATGLGQASWALAAGFTLMPLGTAFLFPCVTGLLSQAVSPRERGL
                     YMGVQHTFGGISRVAFPVAAGILMDRFGVGVPFWISAALVLLTLPLTGALAAPAAREA
                     AATDARQIAAADITGEIRV"
     gene            complement(1231..2661)
                     /locus_tag="VF061_06445"
     CDS             complement(1231..2661)
                     /locus_tag="VF061_06445"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro aminopeptidase"
                     /protein_id="HEX6669178.1"
                     /translation="MRLFLPLLVALTTPALAAQSIPTTEYATRRDSLAARLDSGVVVA
                     FGGRTPVTAERFVQLPAFRYVTGFLEPDAGLVIVVRAGRAQATLYTSARDPRRALYDG
                     FPPDSAEVARRTGIEARFIAALPGRLDSLAGTGLPFYTLRDFATADAATTDTLTRGAQ
                     FMRLFAEGHPGLTVRDAHPVLDSLRTRKSPAEVQLLRRAVDITGGALREVMRALKPGM
                     YEYEVEAMFQSAFRRSGGDGAGFVAIIGSGPNSTQYHYNANDRRIGQGEVVVMDVGAA
                     FGGYTADVTRTLPASGRFSAEQRAVYRIVREAQEAAAKTVRPGSSFEAWRDAARAVVA
                     SGVARLGLTEGVDATFDPPWADQCAGNPVACTQAFLYMAHGLGHGIGLEVHDRPHPWY
                     GSGTFQPGDVFTIEPGVYVSRKLLEILPDTPRNRAMIAKVRPAVERYHEIGVRIEDDY
                     LVTERGAEWLSRAPREIAEVEAEMAR"
     gene            complement(2812..3774)
                     /locus_tag="VF061_06450"
     CDS             complement(2812..3774)
                     /locus_tag="VF061_06450"
                     /inference="COORDINATES: protein motif:HMM:NF017206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NmrA/HSCARG family protein"
                     /protein_id="HEX6669179.1"
                     /translation="MTDKKIIAVVGATGAQGGGLARAILADRTGQFQARALTRNVDSD
                     KARALAAQGVEVVSADVDDPASLRRAFEGAHGAFCVTFFWDHFSPEKEIAEAGNMAEA
                     AKQAGLRHVIWSTLDDTRKLIPLEDDRMPTLQGRYKVPHYDGKGEADALFTKAGVPTT
                     FLLTSFYWENFIYFGAGPKRAPDGKLALVMPMGDKKLPGIAAEDIGKCALTIFRRGRE
                     FIGKTVGIAGGHLTGAEMAAAMSRELGETVVYQDVPPEVYRGFGFPGADDLGNMFQFK
                     RDFNDYYCGARSLEFSRSLNPELQTFDQWLAHNASRIPIEAAAG"
     gene            3928..4851
                     /locus_tag="VF061_06455"
     CDS             3928..4851
                     /locus_tag="VF061_06455"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing GNAT family
                     N-acetyltransferase"
                     /protein_id="HEX6669180.1"
                     /translation="MVASDPILAVRHFNRFYTRQLGLLDEGLHHSPFSLTEVRVMYEI
                     FHRPGITATEVGDALGLDAGYLSRILRGLRRHGLVSARAPAADRRRRTLTLTERGQHT
                     FEGLNARSSQEVGALLARLSRPERRELVRAMRGIEGLLGGPAPVPGDVVLRDPLPGEL
                     GWVVKRHGEIYAAEYGWNAEFEGLVAGIVGQFTASLDPRMERCWIAELRGEPAGSIFL
                     VKDKAKAAKLRLLLVEPWARGHGVGGRLVDACLGFAREAGYAKVRLWTNAELHGARRL
                     YQRAGFRMVDESRAHRFGHDQMFQTWELDLT"
     gene            4981..6369
                     /locus_tag="VF061_06460"
     CDS             4981..6369
                     /locus_tag="VF061_06460"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HEX6669181.1"
                     /translation="MADQEVRADQPAPRTVLHTRDGVVLVVGLVLGAGIFRAPQLVAS
                     GSSSGTMFLSLWVLGGLVSLLGALCYAELAAAYPNAGGEYHFLSRAFGRRAGFLCAWS
                     RMTVIQTGSIALLSFLVGDYVATLAGGGEPRAAISATVAAGVVVALTLVNVAGLRQSG
                     GLQYTLTALEVGGLVAVIVAGLIIASPAPAAPPAAGSGGGGFALAMVFVLLTFGGWSE
                     AAYISAELRDRRRGAVHTFAWGLGIITVLYLLANAAYLRGLGLGGVAGSSAVAADLMQ
                     RAVGGWGAAAVSFAVMVAALSSANATMITGARSNYALGRDVGLFAFLGDWHEGQHTPR
                     SAFLLQGLIALLLVGFGALARSGFEAMVAYTAPVFWLILFGTGASVLVLRRRDPSTER
                     PFRVPLYPLVPLLFCGVAAYMLYSSVAYAGRGALLGVAVMLAGFPILAIAGRRREAAL
                     NPPVARGTTWAP"
     gene            6357..7259
                     /locus_tag="VF061_06465"
     CDS             6357..7259
                     /locus_tag="VF061_06465"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF018076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX6669182.1"
                     /translation="MGTVALPRNRCAIAALTASLALALPAALAGQETSAPARQPDVHF
                     VPTDTTKVREMLTAATVNANDLVYDLGCGDGRFVITAVKKFKARGVCVDIDPARIKES
                     KSNADTAGVRNRIEFVEGDLFEQDLSKASVVTLYLLPSLNLRLRPKLFKELRPGTRVV
                     SNAFDMGDWKADRTMTIKTNSGMQSYAYLWIIPADVSGQWRLTTGAGGAKEYTLDVKQ
                     KYQEVSGTATVGGQATPLAGFSVKGDQVSFTLGEGADRAELTGKVTGDKASGTAKGRG
                     GSWSWSAVRTKPGERSDTLPTEGT"
BASE COUNT         1093 a         2626 c         2669 g         1057 t
ORIGIN      
        1 ccacccggat ctccccggtg atgtcggcgg cggcgatctg gcgcgcgtcc gtggccgcag
       61 cctcccgcgc cgccggcgcc gcgagggcgc cggtgagcgg aagggtgagc agcacgagcg
      121 cggccgagat ccagaacggc acccctacgc cgaaccggtc catcaggatt cccgccgcca
      181 ccggaaacgc cacccgcgag atgccgccga aggtgtgctg cacgcccatg tagagcccgc
      241 gctcccgggg agagaccgcc tgggagagca ggccggtgac acaggggaag agaaacgccg
      301 ttcccagcgg catcaaggtg aagcctgccg cgagcgccca gctcgcctgc cccaggccgg
      361 tcgcggccag ccccgccgcc aggaccacga tgcccacccg tgcgagccgg gcctcgccca
      421 gggcgtccac cgcccggccc aggatcagcg tccgcaccac gacgcccatc ccgcccatgt
      481 acatgacgaa gtacccgacc gtgtgctcgg tgacgccgag gcggtcggcc agcagcagcg
      541 ggacgatctg gatcgtcccg tagaaggccc cgatcccgac agcgtagatc cagatgagcc
      601 gcggggccgt ctcgtgccag cgggagagca cgtgggcgat ggctgcgcgg cccgaggtgg
      661 tcgcggcggc gagcccgccg ggggtgagga atcggcggga ctcggtcagg tacagccagg
      721 cgaacagcgc caccaggagg gcgatgcccg ccgcgccgag accgacgaac tcgagcccgc
      781 cgagggagac caggagcgag cccaccgccg ggccggctac cgcaccgagg ctggtgatcg
      841 cggagagcca gcccaggctc ttggtgcgct gctccggcga ggagacgtcc gccacgtacg
      901 cctgcaccac gccgatggtg ccgcccccga cgccctgcac cagccgggcc atcaggaggg
      961 cgggcaccga gccggcgaag gcgaagagca catccgccgc cgcggtgatg agaaggccgg
     1021 cgaggatcgc cggccgccgg ccgtagcggt cggagacgcg cccccacacc ggcgccacgg
     1081 cgagctgggc gacggagaag gcggagatca ggacgccgac ggtggcggct tcggccccga
     1141 agtcggtggc gtaatagggc aggaggggca cgatcatcgt gagccccacc atgtccacga
     1201 aggcggtgac gaagagaatg aggagcttgc tcaccgcgcc atctcggcct ccacctcggc
     1261 gatctcccgc ggggcgcggg agagccactc ggccccccgc tcggtcacga ggtagtcgtc
     1321 ctcgatgcgg acgccgatct cgtggtaacg ctccaccgcc ggccggacct tcgcgatcat
     1381 cgcccggttc cgcggggtgt cgggcaggat ctccagcagc ttccggctga catagacgcc
     1441 gggctcgatg gtgaagacgt cccccggctg gaaggtgccc gacccatacc agggatgcgg
     1501 acgatcgtgc acttcgaggc caatcccgtg acccagcccg tgggccatat agaggaaggc
     1561 ctgggtgcag gcgaccgggt tgccggcgca ctggtcggcc cagggcgggt cgaaggtggc
     1621 gtccaccccc tcggtcaggc cgaggcgggc cacgccgctc gcgacgaccg cgcgggccgc
     1681 gtcgcgccag gcctcgaacg agctgcccgg ccgcacggtc ttcgccgcgg cctcctgggc
     1741 ctcacgcacg atccggtaca cggcgcgctg ctcggcgctg aaacggccgc tggccgggag
     1801 ggtgcgggtc acgtcggcgg tgtagccgcc gaaggcagct cccacgtcca tcaccaccac
     1861 ctcgccctga ccgatgcggc ggtcgttggc gttgtagtga tactgggtcg agttgggtcc
     1921 cgagccgatg atggcgacga acccggcgcc gtcgccgccg ctgcggcgga aggcggactg
     1981 gaacatcgcc tccacctcgt actcgtacat ccccggcttc agcgcccgca tgacctcgcg
     2041 aagcgcgccg cccgtgatgt cgaccgcgcg gcggagcaac tgcacctccg ccgggctctt
     2101 ccgggtgcgg aggctgtcga gcaccgggtg cgcgtcccgg acggtgagcc cggggtggcc
     2161 ctccgcgaag agacgcatga actgggcgcc gcgggtgagc gtgtcggtcg tggccgcgtc
     2221 ggcggtggcg aagtcgcgca gggtgtagaa gggcaggccg gtgcccgcca gcgagtcgag
     2281 ccgccccggc agcgcggcaa tgaacctggc ctcgatcccg gtgcggcgcg ccacctcggc
     2341 ggagtccggc gggaagccgt cgtacagggc gcggcgcggg tcccgggccg aggtgtagag
     2401 cgtggcctgc gccctgcccg cccggaccac gatcaccagc cccgcatcgg gctcgaggaa
     2461 gccggtgacg tagcggaacg cgggcagctg cacgaaccgc tccgcggtca ccggcgtccg
     2521 gccgccgaag gcgacgacca ccccactgtc gagccgcgcc gccagcgaat cgcgccgggt
     2581 ggcgtattcg gtggtcggga tggactgggc ggcgagagcg ggagtggtga gggcgaccag
     2641 gagcgggagg aagagacgca tgggaatcca ggttgctgat gagacagggg gtacggacga
     2701 tgtcatcctg agcgaagcga aggagacgat gccgtatggc ctccctcgct gcgctcggga
     2761 tgacaaacgg gcgggtggca ctctagacta cgcacccgcc cccggggggt gtcaccccgc
     2821 ggccgcttcg atcgggatcc ggctcgcgtt gtgcgccagc cactggtcga aggtctgcag
     2881 ctcggggttg agcgaccggc tgaactccag gcttctcgcc ccgcagtagt agtcgttgaa
     2941 gtcgcgcttg aactggaaca tgttgcccag gtcgtccgcg ccggggaagc cgaagccccg
     3001 gtacacctcg ggcggcacgt cctggtagac caccgtctcg cccagctcgc gactcatcgc
     3061 tgccgccatc tctgccccgg tcaagtgccc gccggcgatg cccaccgtct tcccgatgaa
     3121 ctcccggccg cgccggaaga tggtcagggc gcacttgccg atgtcctcgg cggcgatccc
     3181 cggcagcttc ttgtcgccca tcggcatcac cagcgccagc ttcccgtccg gtgcccgctt
     3241 cgggccggcg ccgaagtaga tgaagttctc ccagtagaac gaggtgagca ggaacgtggt
     3301 cggcacgccg gccttggtga acagcgcgtc cgcctcgccc ttcccgtcgt agtgggggac
     3361 cttgtacctg ccctggagcg tcggcatccg gtcgtcctcg agcggaatca gcttgcgggt
     3421 gtcgtcgagg gtggaccaga tcacgtgccg gaggccggcc tgcttcgccg cctccgccat
     3481 gttgccggcc tcggcgatct ccttctcggg cgagaaatgg tcccagaaga aggtgacgca
     3541 gaaggcgccg tgggcaccct cgaacgcgcg ccggagcgac gcggggtcgt ccacgtcggc
     3601 gctgaccacc tccaccccct gggccgcgag ggcccgggcc ttgtcggaat ccacgttgcg
     3661 ggtgagggcg cgggcctgga actggccggt ccggtcggcc aggatcgcgc gcgccagtcc
     3721 acctccctgg gcgccggtcg ctcccaccac ggcgatgatc ttcttgtcgg tcacggtact
     3781 cctccacatc gaatgagatc aggcatccac cccttcaatc tgtagccatc ctcgccgccc
     3841 tcgccaccga ccccacgacg gtgaaatagt tgacaaaagc aagtaattgc cgcaccctga
     3901 gaacaccacc agcacccaga gcgcgccatg gtcgcctccg accccatcct cgccgtccgc
     3961 cacttcaacc ggttctacac ccgccagctc gggctgctgg acgaggggct gcaccactcg
     4021 cccttctccc tcaccgaggt ccgggtcatg tacgagatct tccaccgccc cggcatcacg
     4081 gccacggagg tcggggacgc cctggggctc gatgcgggat acctgagtcg tatactccgg
     4141 gggctgcgac gccacggact ggtgtccgcc agggccccgg cggccgaccg gcggcggcgc
     4201 acgctcaccc tcaccgagcg gggccagcat accttcgaag gcctgaacgc ccgctcgagc
     4261 caggaggtgg gggccttgct ggcacgactg agccggcccg agcgtaggga actggtccgc
     4321 gcgatgcgcg ggatcgaggg cctgctcggc gggcccgccc cggtcccggg cgacgtggtg
     4381 ctccgcgacc ccctccccgg cgagctcggc tgggtggtca agcggcacgg cgagatctac
     4441 gccgccgagt acgggtggaa tgcggagttc gaggggctgg tcgccgggat cgtgggtcag
     4501 ttcacggcga gtctcgatcc ccggatggag cgctgctgga tcgcggagct gagaggcgag
     4561 ccggcgggct ccatcttcct ggtgaaggac aaggcgaagg cggcgaagct ccggctgctc
     4621 ctggtggagc cctgggctcg cggccacggg gtcggcggcc ggctggtgga cgcttgcctc
     4681 ggcttcgcgc gtgaagcggg atatgctaag gtccgcctct ggaccaacgc cgagctgcac
     4741 ggcgcccggc gcctgtacca gcgggccggc ttccggatgg tggacgagag ccgtgcccac
     4801 cgcttcgggc acgaccagat gttccagacc tgggagctgg acctgacctg accgaggggc
     4861 ggggcgccgg atgtgcgccg cgttacagcc tgcacgcgct cgcggggcct ctattccatg
     4921 cccgcccggc ggcgagccca tgggagtgtc atcccgccaa ccgagaccgg tggagtccac
     4981 atggcagacc aggaagtgcg cgccgaccag cccgcgccga gaaccgtgct gcacacccgg
     5041 gacggggtgg tcctggtggt ggggctggtg ctcggcgccg gaatcttccg cgcgccgcaa
     5101 ctggtggcga gcggcagctc ctccgggacg atgttccttt ccctgtgggt cctcggcggg
     5161 ctggtgtcgc tgctcggggc gctctgctat gcggagctgg cggcggcgta ccccaatgcc
     5221 ggaggcgagt accacttcct gagccgggcc ttcggccgcc gcgcgggctt tctctgcgcc
     5281 tggtctcgga tgacggtgat ccagaccggg tcgatcgcgc tgctgtcctt cctggtgggt
     5341 gactacgtcg ccacgctggc gggcggggga gagccccggg ccgccatctc cgccaccgtg
     5401 gcggcgggcg tcgtggtggc gctcaccctg gtcaacgtcg ccggtcttcg gcagagcggg
     5461 gggctccagt acaccctcac ggcgctcgag gtcggcgggc tggtggcggt gatcgtcgcg
     5521 ggtctgatca tcgcctcccc cgcgccggcc gcgcccccgg cggcgggctc cggcggcggc
     5581 ggattcgctc tggcgatggt cttcgtcctc ctcaccttcg gcggctggag cgaggcggcc
     5641 tacatctcgg cggagctgcg ggaccgccgc cggggcgcgg tccacacctt cgcctggggg
     5701 ttgggcatca tcaccgtgct ctacctgctg gccaacgccg cctacctccg cggcctgggc
     5761 ctcggcggcg tcgccggctc ctccgcggtc gcggcggatc tcatgcagcg ggccgtgggc
     5821 ggctggggcg cggccgccgt gagcttcgcg gtcatggtgg cggccctctc gtcggccaat
     5881 gccacgatga tcaccggggc gagaagcaac tacgccctgg gccgtgacgt aggactgttc
     5941 gccttcctgg gcgactggca cgagggacag cacacgcccc ggtcggcctt cctgctccag
     6001 gggctgatcg cgctgctgct ggtgggcttc ggggcgctcg cgcggagcgg attcgaggcc
     6061 atggtggcgt acactgcccc ggtgttctgg ctgatcctgt tcggcaccgg cgcctcggtg
     6121 ctggtgctcc ggcgacgcga cccctcgacg gagcgaccgt tccgggtgcc cctctatccg
     6181 ctcgttcccc tgctgttctg cggcgtcgcc gcgtacatgc tctattccag tgtggcctat
     6241 gcgggccgcg gcgcgctcct cggggtcgcc gtgatgctcg ccggctttcc gatactcgcc
     6301 atcgccggcc gccggcgcga ggcggccctc aatccacccg ttgcacgagg caccacatgg
     6361 gcaccgtagc cctcccccga aaccgctgcg ccatcgcggc cctgacggcg tccctggcgc
     6421 tcgcccttcc cgccgcgctg gcgggtcagg agacctccgc cccggcgcgg cagccggacg
     6481 tccacttcgt cccgaccgac accaccaagg tccgcgagat gctcaccgcg gccaccgtca
     6541 acgccaacga cctggtctac gatctgggct gcggggatgg gcggttcgtc atcacggcgg
     6601 tgaagaagtt caaggcgcgg ggcgtatgcg tggacatcga tcccgcccgc atcaaggaga
     6661 gcaagagcaa cgcggacacc gccggcgtgc ggaaccggat cgagttcgtg gagggcgacc
     6721 tcttcgagca ggacctctcc aaggccagcg tggtcaccct ctacctgctg ccgtcgctca
     6781 acctgcggct ccgccccaag ctgttcaagg agctgcggcc cggcacccgg gtggtctcca
     6841 acgccttcga catgggcgac tggaaggcgg accggaccat gaccatcaag accaactccg
     6901 ggatgcagag ctacgcctat ctctggatca tcccggccga cgtctcgggc cagtggcggc
     6961 tcacgaccgg ggctggcggg gcgaaggagt acaccctcga cgtcaagcag aagtaccagg
     7021 aggtgtcggg caccgcgacc gtcggcgggc aagcgacgcc cctcgccggc ttcagcgtga
     7081 agggcgatca ggtctcgttc acgcttgggg aaggggcgga ccgggccgag ctcaccggga
     7141 aagtcaccgg cgacaaggcg agcggcacgg ccaagggcag aggcggcagc tggtcgtgga
     7201 gcgcggtgcg caccaagccg ggcgagcggt ccgacaccct gccgaccgaa ggaacctgaa
     7261 tcgagggaag gaatgctcat gatgcagagg ctcgtcgccg ggttggtccc ggcgctgcta
     7321 ctcacggccg ccgcggcccc gttcgcggtg caggaatgga ccgtgccctg ggagggcacc
     7381 cgtccccgcg atccgttcgt cgcgcccaac ggactggtgt ggttcgtggg ccaggcgggg
     7441 aacta
//
LOCUS       DASUYN010000330         3501 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_329914, whole genome shotgun sequence.
ACCESSION   DASUYN010000330 DASUYN010000000
VERSION     DASUYN010000330.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3501)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3501)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3501
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_329914"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1657
                     /locus_tag="VF061_06470"
     CDS             <1..1657
                     /locus_tag="VF061_06470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA gyrase C-terminal beta-propeller
                     domain-containing protein"
                     /protein_id="HEX6669183.1"
                     /translation="ELAMEKKIEGISGVNDESDKDGMRVVIDLKRDAIPNVVLNQLYK
                     HTAMQSTFGVIMLALDRGVPKVMNLKELLERYIEHRHEIIVRRTQFDLDAAEARAHIL
                     EGLKIAVDNIDEVIKIIRGSEDTPEADARLRKRFGLSEKQSDAILNMRLAKLTGLEID
                     KLEAELKEVRGVIKELKSILASKPRRMGILKSEMAEVVESFGDERRTEIVADQGEFTV
                     EDLIAEEDMVITISHTGYIKRIPVSTYKRQRRGGRGLNGADLKENDWVEHLFIASTHD
                     YLLFFTNTGQLYWLKVHEIPQAGRAARGKPVVNCIAIKQTEQVAALVPVREFTDDKCL
                     IFATRQGTVKKTLLSAYGNVRTNGICAINIEQDDELIDVQVCDQNSDIVLATKDGMSI
                     RFHQGDVREMGRATTGVKGIELEKGDEVIGMVVVRRDATLLVVSEKGFGKRSELADYR
                     VQKRGGKGIITLKKTDKTGSIVALKEVIPDDELMMITRHGVIIRLPVDGIRVIGRNTQ
                     GVKVMNLDAGDTVVDVARVVKEDEGGAEEAAGGDAVAPTAVEE"
     gene            1671..2645
                     /locus_tag="VF061_06475"
     CDS             1671..2645
                     /locus_tag="VF061_06475"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine dehydratase"
                     /protein_id="HEX6669184.1"
                     /translation="MPLTAEPSAAVTLDDVRAAARTLEGVAVRTPLVEVAALSARAGV
                     PVGLKCEQLQPIGAFKIRGAYNAISRAAAAGARGVVTQSSGNHGQAVAYAARAFGLRA
                     VVVMPESTPRIKVEGVRQHGGEVVFAGAIRSLEQGRRAEAIAGDEGLAMIPPYDHPDV
                     VAGQGTIGLEIVDQRPDLAVVLSPVSGGGLLAGITIALAALRPGARIVAVEPTGAAKL
                     TAALAAGEPRTLDHTESMADGLLTRSIGSFTFPIIRRVVREAVQVTEDEIAAAVRFLH
                     REAGLRVEPSGAVTTAAVLAGRVRLDGPAVLVVSGGNVDPELFQRLAE"
     gene            2642..>3501
                     /locus_tag="VF061_06480"
     CDS             2642..>3501
                     /locus_tag="VF061_06480"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX6669185.1"
                     /translation="MTLAPKILVADDDQALSRTLSWILKENGYEVLTVPGGEHLFDHL
                     SAEQFDLLLLDIMMPKVDGLQLLQRVKSDPRFKDLPVLMISSMPPEEATVRSLGLGAA
                     DFIPKPFRVRELLARVKAHLRVGRELNQARAEARSRSEMMEILQEVTASLKPEEIYQI
                     LVRRVAQGLNISRCSIIIAGPDDDHGTVVAAFENPMLDNLPVDLRRYPEIQHALATGE
                     VVLVRDVHTDPLYGEIRTSWEAEGRPIPTRSAIAIRFSLRQQPAGVFFLRTTTDDAPL
                     NEQDVQFAEQV"
BASE COUNT          605 a         1186 c         1222 g          488 t
ORIGIN      
        1 cgagctggcg atggagaaga agatcgaggg catcagcggg gtgaacgacg agtccgacaa
       61 ggacggcatg cgggtcgtga tcgacctcaa acgcgacgcc atccccaacg tggtgctgaa
      121 ccagctctac aagcacaccg ccatgcagag caccttcggc gtcatcatgc tcgcgctcga
      181 caggggcgtg ccgaaggtga tgaatctcaa ggagctgctc gagcgctaca tcgagcaccg
      241 ccacgagatc atcgttcgcc ggacccagtt cgacctcgac gccgccgagg ctcgggcaca
      301 catcctcgag ggcctcaaga tcgccgtcga caacatcgac gaggtcatca agatcatccg
      361 cggctcggag gacacccccg aggccgacgc ccggcttcgg aagcggttcg ggctgagcga
      421 gaagcagagc gacgcgatcc tcaacatgcg actcgccaag ctcaccggcc tggagatcga
      481 caagctggag gccgagctca aggaggtccg gggggtgatc aaggagctga agtccatcct
      541 ggcgtccaag cccaggcgga tgggcatcct caagagcgag atggccgagg tggtggagtc
      601 gttcggcgac gagcggcgca cggagatcgt ggccgaccag ggcgagttca cggtcgagga
      661 cctgatcgcc gaagaggaca tggtcatcac catctcccat accggctaca tcaagcggat
      721 cccggtcagc acctacaagc ggcagcgccg cggcgggcgc ggcctcaacg gggccgacct
      781 gaaggagaac gactgggtcg agcacctgtt catcgccagc acccacgact acctgctctt
      841 cttcaccaac accggccagc tctactggct caaggtgcac gagatcccgc aggccggccg
      901 cgcggcgcgg ggcaaaccgg tggtgaactg catcgccatc aagcagaccg agcaggtcgc
      961 ggcgctggtg ccggtgcggg agttcaccga cgacaagtgc ctcatcttcg ccacccgcca
     1021 gggcacggtg aagaagaccc tgctctcggc gtacggcaac gtgcgcacca acgggatctg
     1081 cgccatcaac atcgagcagg acgacgagct gatcgacgtc caggtctgcg accagaacag
     1141 cgacatcgtc ctggcgacca aggacggcat gagcatccgc ttccaccagg gcgacgtgcg
     1201 cgagatgggg cgcgccacga ccggggtgaa gggaatcgag ctggagaagg gcgacgaggt
     1261 catcggcatg gtggtggtcc ggcgcgacgc caccctgctg gtcgtgagcg agaagggctt
     1321 cggcaagcgc tccgagctgg ccgactaccg ggtccagaag cgcgggggca aggggatcat
     1381 caccctgaag aagaccgaca agaccgggtc catcgtggcc ctcaaggagg tcattcccga
     1441 cgacgagctg atgatgatca cccggcacgg cgtgatcatc cggctgccgg tggacggcat
     1501 ccgggtcatc gggcgcaaca cccagggcgt gaaggtgatg aacctcgacg cgggcgacac
     1561 ggtggtggac gtggccaggg tggtgaagga ggacgagggc ggcgcggagg aggccgccgg
     1621 cggtgacgcg gtggccccca ccgcggtgga ggagtaggcc gggagacccg atgccgctca
     1681 cagccgaacc gtcggccgcc gtcacgctgg acgacgtgcg cgccgcggcc cgcaccctcg
     1741 agggggtcgc cgtccgcacc cctctcgtcg aggtggccgc gctctcggcg cgcgcgggtg
     1801 tgccggtggg gctcaagtgc gagcagctcc agccgatcgg cgccttcaag atccgagggg
     1861 cgtacaacgc catctcgcgg gccgcggcgg cgggggcccg gggcgtcgtc acccaatcca
     1921 gcggcaatca cggtcaggcg gtggcctacg cggcccgggc cttcgggctc cgggccgtcg
     1981 tcgtgatgcc cgagtccacc cccaggatca aggtggaggg ggtccggcag cacggcggcg
     2041 aggtcgtgtt cgccggcgcg atccgttcgc tggagcaggg ccggcgggcc gaggcgatcg
     2101 cgggggacga gggcctggcg atgattccgc cgtacgatca cccggacgtg gtggcggggc
     2161 agggcaccat cggtctcgag atcgtggacc agcgcccgga cctcgcggtc gtgctctcgc
     2221 cggtgagcgg cggcgggctg ctcgccggga tcacgatcgc cctcgccgcg ctccggcccg
     2281 gcgccaggat cgtcgccgtg gagccgaccg gggcggccaa gctcaccgcc gcgctcgcgg
     2341 ccggggagcc ccgcaccctg gatcacaccg agagcatggc cgacgggctc ctcacccggt
     2401 ccatcggtag ctttactttc cctatcattc ggcgggtggt gcgcgaagcc gtccaggtca
     2461 ccgaggacga gatcgcggcg gccgtccgct tcctgcaccg cgaggccggg ctccgcgtcg
     2521 agccctccgg cgcggtcacc accgcggcgg tcctcgccgg gcgggtacgc ctcgacggcc
     2581 ccgccgtcct ggtggtgagc ggcggcaacg tggatcccga actctttcag cggctggcgg
     2641 aatgaccctc gctcccaaga tcctcgtcgc cgacgacgat caggctctgt cccgaacgct
     2701 ctcctggatc ctgaaggaga acggctacga ggtgctcacc gtgccgggag gggagcatct
     2761 cttcgaccat ctgagcgcgg agcagttcga cctcctcctg ctcgacatca tgatgcccaa
     2821 ggtggacggg ctccagctgc tgcagcgggt caagtcggat ccccgcttca aggacctgcc
     2881 ggtcctcatg atttcctcga tgccgcccga ggaagccacc gttcgctctc tcggcctcgg
     2941 cgccgccgac ttcattccca agccgttccg cgtccgggag ctgctcgccc gggtcaaggc
     3001 gcatctgcgc gtcggccgcg agctgaatca ggcgcgggcg gaggcgcgct cccgctcgga
     3061 gatgatggag atcctccagg aggtcaccgc ctcgctcaag ccggaggaga tctaccagat
     3121 cctggtgcgg cgggtggcgc aggggctgaa catctcccgg tgctcgatca tcatcgccgg
     3181 gccggacgac gatcacggga ccgtcgtggc ggcgttcgag aacccgatgc tcgacaacct
     3241 gccggtggac ctgcgccgct atcccgagat ccagcatgcc ctcgccaccg gcgaggtggt
     3301 gctggtgcgc gacgtgcaca ccgacccgct gtacggggag atccgcacca gctgggaggc
     3361 cgaggggcgg ccgattccca cccgctccgc gatcgccatc cgcttctcgc tgcggcagca
     3421 gccggccggc gtgttcttcc tccgcaccac caccgacgac gccccgctca acgagcagga
     3481 cgtgcagttc gccgagcagg t
//
LOCUS       DASUYN010000331         3036 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1651635, whole genome shotgun sequence.
ACCESSION   DASUYN010000331 DASUYN010000000
VERSION     DASUYN010000331.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3036
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1651635"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..224)
                     /locus_tag="VF061_06485"
     CDS             complement(<1..224)
                     /locus_tag="VF061_06485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma factor"
                     /protein_id="HEX6669186.1"
                     /translation="MTATDTHRTIEAVWRIESARLIAGLTRLVGDVGLAEDLAQDALV
                     AALERWPRSGIPDKPGAWLMATAKHRAIDQL"
     gene            561..1676
                     /locus_tag="VF061_06490"
     CDS             561..1676
                     /locus_tag="VF061_06490"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sialidase family protein"
                     /protein_id="HEX6669187.1"
                     /translation="MSGVRVLVGTRKGGFVLTADGKRDRWKVSGPFFAGWEIYHMKAS
                     PAAPDRLWASQSSGWFGQVVQRSEDGGSTWEAVGNQFSYDGVPGTHQWYDGTQHPWEF
                     ARVWHVEPSLTDPDTVYAGVEDAALFRSTDGGRSWHELSGLRRHSSGPRWQPGAGGMC
                     LHTIVLDPADPKRIFVAISAAGAFRSDDGGETWRPVNRGLKSQGIPDPDAEVGHCVHR
                     IAMHPSRPEVLFMQKHWDVMRSDDAGETWREVSGNLPSDFGFPIGVHAHEPETIYVVP
                     IKSDSEHFPPEGKLRVYRSRTGGEEWEALTRGLPQQDCYVNVLRDAMAVDTLDPCGIY
                     FGTTGGQVYGSADGGGSWTPIVRDLPAVLSVEVQVLP"
     gene            1673..1969
                     /locus_tag="VF061_06495"
     CDS             1673..1969
                     /locus_tag="VF061_06495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669188.1"
                     /translation="MIRVVLPQHLRTLARVGEEVEVEIEGPATQRAVLDALEARYPVL
                     RGTIRGHTNQRRRPFVRFFACEQDLSHEPPDDPLPEPVASGAEPLLVVGAMAGG"
     gene            complement(1966..2406)
                     /locus_tag="VF061_06500"
     CDS             complement(1966..2406)
                     /locus_tag="VF061_06500"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX6669189.1"
                     /translation="MKPRITLLTLGVDDIERAVGFYRDGLGLATKGIVGTEFEHGAVA
                     FFELQAGLQLALWSRSSIAHDTGLPQSPRSATELTIGHNVRSPEEVDEVMGQAARAGA
                     TIVKAAAPTFWGGYAGYFQDPDGHLWEVAWNPAMLPADESGGRD"
     gene            complement(2432..2869)
                     /gene="rpiB"
                     /locus_tag="VF061_06505"
     CDS             complement(2432..2869)
                     /gene="rpiB"
                     /locus_tag="VF061_06505"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004751 - ribose-5-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009052 - pentose-phosphate shunt,
                     non-oxidative branch [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 5-phosphate isomerase B"
                     /protein_id="HEX6669190.1"
                     /translation="MRIAIGSDHAGFRYKERLRQALGEEGHEVTDFGTDSEAPVDYPL
                     VIRPLAQAVAAGRYDRGIILGGSGNGEAIVANRVRGIRCTLCWNVESARLAREHNDAN
                     VLSLGERLIAAEQLLPIVRVWLTTPFEGGRHARRVALIDGDAR"
BASE COUNT          443 a         1075 c         1055 g          463 t
ORIGIN      
        1 agctggtcga tcgcgcggtg cttcgccgtc gccatcagcc acgcgccggg cttgtccgga
       61 atccccgacc ggggccagcg ctccagggcg gccaccagcg cgtcctgcgc caggtcctcc
      121 gccagcccga cgtcgccgac caggcgggtg aggccggcga tgagtcgggc ggactcgatc
      181 ctccagaccg cctcgatggt gcgatgggtg tcggtcgccg tcacggctac caatcagccc
      241 cgtgcgcccc tccaatgcaa gacggtccgc gcgaagacgc gctacgacgg cctcctccta
      301 ggagcccacc tcgatcagcg agagcccggc gatcggctcc tcgctgggca tcatgcccgc
      361 ctcggtgtca cggtcggcct tgcggatgag catgaatcgc atggttcctc tcgcggttga
      421 cgtttccggc cggatccgga catcgatgtg tcacccggcc ccttacgaac gtcgaacggg
      481 cggcgccgga ttcgacaccc acgcttgcgc gggcccggct ccctggccag tatagcccgg
      541 acttccggaa ggagcatgag atgagtggtg tgcgtgtgct cgtcggcacc cgaaagggcg
      601 gtttcgtgct caccgccgac gggaagcggg atcgctggaa ggtgtccggg cccttcttcg
      661 cgggctggga gatctaccac atgaaggcgt cccccgcggc gcctgaccgg ttgtgggcct
      721 cgcaatccag cggctggttc gggcaggtag tgcagcggtc ggaggacggc ggcagcacct
      781 gggaggcagt tggcaaccag ttctcctacg acggggtgcc gggcacccac cagtggtacg
      841 acggcaccca gcacccctgg gaattcgccc gggtgtggca cgtcgagccc tccctgaccg
      901 acccggatac ggtgtacgcc ggtgtggagg atgccgcgct cttccgctcc accgacggcg
      961 gtcgcagctg gcacgagctt tcggggctgc ggcgccacag ctcgggaccc cgctggcagc
     1021 ccggagcggg cggcatgtgc ctgcacacca tcgtgctcga ccccgcggac ccgaagcgca
     1081 tattcgtggc catctccgcg gccggcgcgt tccgcagcga cgacggcggc gagacctggc
     1141 ggccggtcaa ccgaggcctc aagtcgcagg gcatccccga ccccgacgcc gaggtcgggc
     1201 actgcgtcca ccggatcgcg atgcatccgt cccggcccga ggtgctcttc atgcagaagc
     1261 actgggacgt gatgcggagc gacgacgccg gcgagacctg gcgcgaggtg agcggcaacc
     1321 tgcccagcga cttcggtttc cccatcggcg tgcacgcgca cgagccggag acgatctacg
     1381 tggtgccgat caagagtgac tcggagcact tcccgccgga aggcaagctg cgcgtgtacc
     1441 ggagccgcac cggcggggag gagtgggagg cgctcacccg gggactgccg cagcaggact
     1501 gctacgtcaa cgtcctgcgc gacgccatgg ccgtggatac gctggatccc tgcgggatct
     1561 acttcggcac caccggtggc caggtgtacg gctcggccga cggcggcggg agctggacgc
     1621 cgatcgtgcg cgacctcccg gcggtgctgt cggtggaggt ccaggtcctg ccatgattcg
     1681 cgtcgtgttg ccgcagcacc tccgtaccct cgcacgggtc ggcgaggaag tggaggtgga
     1741 gatcgagggg ccggcgaccc agcgggccgt gctggacgcg ctggaggcgc ggtaccccgt
     1801 gctccgcggg acgatccggg ggcataccaa ccagcggcgg cgtcccttcg tgaggttctt
     1861 cgcctgcgag caggaccttt cccatgagcc gccggacgac ccgctgcccg agccggtcgc
     1921 ctccggcgcc gagccgctgc tggtggtggg cgccatggcg ggcggctagt ccctgcctcc
     1981 gctctcgtcg gccgggagca tcgccggatt ccaggccacc tcccacaggt ggccgtcggg
     2041 gtcctggaag tagccggcgt agccccccca gaaggtgggt gccgccgcct tgacgatcgt
     2101 cgcgccggcc cgtgccgcct gccccatgac ctcgtccacc tcctccgggc tcctcacgtt
     2161 gtggccgatg gtgagctcgg tggcactgcg cggggactgg gggagcccgg tgtcgtgcgc
     2221 aatcgagctg cgggaccaca gcgccaactg gagaccggcc tggagctcga agaaggcaac
     2281 cgcgccgtgc tcgaattcgg tccccacgat ccccttggtg gcgaggccga ggccgtcccg
     2341 atagaacccg acggcgcgct cgatatcgtc cacgccgagc gtcagcagcg tgatgcgtgg
     2401 cttcatgctg cactcccctc tcctgcgacg ctcaccgtgc gtccccatcg atcagggcca
     2461 cccggcgcgc gtgccgtcct ccctcgaacg gcgtggtgag ccaaacccgt acgatcggga
     2521 gcaattgctc ggccgcgatc agccgctcgc cgagcgagag cacgttggcg tcgttgtgct
     2581 cccgggccag ccgcgcggac tcgacattcc agcagagggt gcagcggatg ccgcgcaccc
     2641 ggttcgccac gatggcctcg ccgttgccgg aaccgccgag gatgatgcca cggtcgtagc
     2701 ggccggccgc cactgcctgg gccaacggcc ggatcaccag ggggtagtcg accggcgcct
     2761 cggaatcggt gccgaagtcg gtcacctcgt ggccctcctc acccagcgcc tgccgcagcc
     2821 gctccttgta gcggaacccg gcatgatccg acccgatggc gattctcact gggcgcccgc
     2881 cacgaggatc cgccagcccg cgatgatcgc gatggcgtca acggcgaaat agtgtcgcat
     2941 gggagacgac gtctcctagt ggatcgtccg gcccgcctcg agcatctcga cgaactgctg
     3001 aagccgtcgc tgccgggtgt cggcccgctt ggcatc
//
LOCUS       DASUYN010000332         2523 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_107667, whole genome shotgun sequence.
ACCESSION   DASUYN010000332 DASUYN010000000
VERSION     DASUYN010000332.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2523)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2523)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2523
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_107667"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(225..1235)
                     /locus_tag="VF061_06510"
     CDS             complement(225..1235)
                     /locus_tag="VF061_06510"
                     /inference="COORDINATES: protein motif:HMM:TIGR04018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YpdA family putative bacillithiol disulfide
                     reductase"
                     /protein_id="HEX6669191.1"
                     /translation="MDLLVVGAGPCGLAVGVAAKRAGLSCVLLDRRTIVSTIERYPLG
                     MTFFSTPERIEIGDIPFISSHEKPTRRDGLIYYRRVAEHYGLDVRPSEEVVDVTRETD
                     GTFRVEVRRPHDELVYRAGAVVFATGYYDNPNYLGVPGEELPHVVHYFSEGHPYWRRR
                     VVVIGAGNSSVDAALECWRAGAIVTLVHFGEGFDRTVKAWVLPDIANRVKEGSIVAHW
                     RSRVRAITPTEVEIVHEQTGSVECLPTDAVLAMTGYHADTSVLRRLGVPVDPVTGIPT
                     HDEATMATPLPGVYLAGVIASGNDANRLFIENSRGHGELIVRDLLQRQRAAGRASGTG
                     LR"
     gene            complement(1291..>2523)
                     /locus_tag="VF061_06515"
     CDS             complement(1291..>2523)
                     /locus_tag="VF061_06515"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HEX6669192.1"
                     /translation="KLVDVLAERADLVVRYQGGANAGHTVVIGDTQFVLRQIPSGILH
                     AGVVCVVGNGVVLEPETFFGELDQLAERGVSTAGRIFVSDRAHLVLPYHKLLDAASEK
                     SQKLGTTGRGIGPTYEDKYGRRGIRVADLRRLECARELLVDRVERANRLLEMMGSTER
                     ASYDQHAALLERLAPRLLPVAADAGLLVHRAVREGKRVLLEGAQGAMLDVDHGTYPFV
                     TSSNTTAGGAAVGAGIGPTLIHGVLGVVKAYTTRVGNGPLPTEAPSPHGDRLREVGGE
                     FGAVTGRPRRCGWFDATVVRYAARVNGLTGLAVTKLDVLDGFEEVPVCTAYRLDGEAC
                     EEMPAEVEALGRVEPRYEVLPGWNRPTGGARRLEDLPREARAYLDRLEALSGVPVRYV
                     SVGTRRDQIIETSTAGSG"
BASE COUNT          378 a          954 c          812 g          379 t
ORIGIN      
        1 ttgacgttct tcttcagctc cacgccgagc gggccgtagt cccagaccga gcccagcccc
       61 ccatagatct ccgaggattg gaagacgaag cccctgcgct tgcagaggga gaccagcttg
      121 tccatcacgg tggtgtcggc catgagcgtg gggtgcgggg tcgggaaagg gtgcgaacgg
      181 ggtggataat agggcgtacg gtggcggcgg ccaactcgga gcggtcagcg aaggccggtc
      241 ccggacgccc gccctgcggc tcgttgcctc tgcaacaggt cacgcacgat cagctcgccg
      301 tgtcccctcg agttctcgat gaacagccgg ttggcatcgt tcccgctggc gatgacgccc
      361 gccaggtaca cccccggcag cggcgtcgcc atcgtcgcct cgtcgtgggt cggaatcccg
      421 gtgaccgggt ccaccggcac cccgagccgc cgcaggaccg aggtgtcggc atggtagccg
      481 gtcatggcca gcaccgcgtc cgtcggcagg cactccaccg atccggtctg ctcgtgcacg
      541 atctccacct ccgtcggcgt gatcgcccgc acccgcgagc gccagtgggc cacgatgctt
      601 ccttccttga cccggttggc gatgtccggc aggacccaag cctttaccgt gcggtcgaat
      661 ccctccccga agtgcaccag cgtcacgatg gcccccgcgc gccagcactc gagggcggcg
      721 tccacgctgc tgttccccgc cccgatcacc accacgcggc ggcgccagta cggatggccc
      781 tccgagaagt agtgcaccac gtgggggagc tcctcgcccg gcacgccgag gtaattggga
      841 ttgtcgtagt agccggtggc gaacacgacc gccccggccc ggtagaccag ctcgtcgtgc
      901 ggccggcgga cctcgacccg gaacgtgccg tccgtctccc gggtgacgtc cacgacttcc
      961 tccgaggggc gcacgtccag accgtagtgc tcggcgaccc ggcggtagta gatcagcccg
     1021 tcccgccggg tcggcttctc atggctcgag atgaagggaa tgtccccgat ctcgatccgc
     1081 tcgggggtgg agaagaacgt catccccagc ggatagcgct cgatggtgga cacgatggtc
     1141 cgccggtcca gcagcacgca gctgagaccc gcacgcttcg ccgcgacgcc tacggccagt
     1201 ccgcagggcc cggcgccgac caccagaaga tccacctgat ccaaacctct atctcctatc
     1261 cccgcgtagc gattgtcacc acttccaagg tcacccggag cccgcggtgc tggtttcgat
     1321 gatctgatcc cgcctggtcc ccacgctgac ataccgcacc gggacacccg acagcgcctc
     1381 gagccggtcg aggtacgctc gagcctccct ggggaggtcc tccagccggc gggcgccgcc
     1441 ggtcgggcgg ttccagccag gcagcacctc gtaccgcggc tcgacccggc cgagggcctc
     1501 cacctcggcc ggcatctcct cgcaggcttc gccgtcgaga cggtaggcgg tgcataccgg
     1561 gacctcctcg aagccgtcca gcacgtccag cttggtgacc gcgagtccgg tcaggccgtt
     1621 cacccgggcg gcgtagcgca ccaccgtcgc gtcgaaccag ccgcagcggc ggggccgccc
     1681 ggtgaccgcg ccgaactcgc ctcccacctc ccgcagccgg tcgccgtggg gactcggcgc
     1741 ctccgtcggc agggggccgt tgcccacccg cgtcgtgtac gccttcacca cccccaggac
     1801 cccgtgaatg agcgtcggcc cgatacccgc gcccaccgcc gcgccgccgg ccgtcgtgtt
     1861 ggaggaggtc acgaagggat aggttccgtg atccacgtcc agcatggcgc cctgcgcgcc
     1921 ctcgagcagc acccgcttgc cctcgcgcac ggcccggtgg accaggaggc cggcgtccgc
     1981 cgccaccggc agcagccgcg gcgccagccg ctcgagcagc gccgcatgct ggtcgtacga
     2041 ggcacgctcc gtggacccca tcatctccag caggcgattg gcccgttcca cccgatcgac
     2101 cagcagctcc ctggcgcact ccagcctccg gagatccgcc acccggatcc cccgccgccc
     2161 gtacttgtcc tcgtaagtcg gaccgatgcc tcgcccggtg gtgccgagct tctggctctt
     2221 ctcgctggcg gcgtcgagca gcttgtgata cggaagcacc aggtgggccc ggtcggatac
     2281 gaagatcctt cccgccgtgg agactccgcg ctcggccagc tggtccagtt cgccgaagaa
     2341 ggtctccggc tccagcacca cgccgttgcc caccacgcac acgacgccgg cgtgcaggat
     2401 gcccgacggg atctggcgca ggacgaactg ggtgtcgccg atgacgacgg tgtgtccggc
     2461 gttggcgccg ccctggtagc gcaccaccag gtcggcccgc tccgccagca cgtccaccag
     2521 ctt
//
LOCUS       DASUYN010000333         5296 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_768796, whole genome shotgun sequence.
ACCESSION   DASUYN010000333 DASUYN010000000
VERSION     DASUYN010000333.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5296)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5296)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5296
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_768796"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..233)
                     /locus_tag="VF061_06520"
     CDS             complement(<1..233)
                     /locus_tag="VF061_06520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669193.1"
                     /translation="MHRNIVLGILAIFLHVASLRAQHASRWGDELPPAPVMPESFFAV
                     PGMDQPVRWPAPPLNRAPARMRAIYVNAWAFGG"
     gene            complement(302..1843)
                     /locus_tag="VF061_06525"
     CDS             complement(302..1843)
                     /locus_tag="VF061_06525"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEX6669194.1"
                     /translation="MRTYRRRSRPFAEGLRLLCALALLLQLGSAVEAQQRRYLVELGA
                     GGLSQSYGDVTELKSAFGGVGRVGLWLPYHFSVELEGAFAGSETRETGVSVSTRTIAG
                     SVLYNILLGQKAWAHLRAGGGSTRFGDPCPSVAPQFICGSSSALVGGAGLRIGITPEA
                     LVRGDLILTRNRSEDPDRSFTNVGVSVGLSYMLGSKPIPDSDGDGILENRDRCPDTPA
                     GAQVDGTGCPSDSDADGVPDGVDRCANTPPGAEVNATGCTRDSDGDNIPDGLDRCPDT
                     ESGVLVDPNGCPRDSDGDAIPDGLDRCSETPKGATVDALGCPGDEDGDGVLDGLDRCP
                     RTPTGATVNATGCPTAQGAAPQPAPQRAAPNRTLRDTTTPRAEAPAPAPVAPAPRAPP
                     AGAALRGRLTPGVISGVAFAAGSARLLPQSYVPLDSIAEILKADTTVRIEVGAHTDNS
                     GTPAENQHLSNLQAEAVRTYLVTKGVSFQQVQARGYGGAFPLTSDNTPRGRAANRRVE
                     IKLGL"
     gene            1968..2219
                     /locus_tag="VF061_06530"
     CDS             1968..2219
                     /locus_tag="VF061_06530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_255349558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:1998..2000,aa:Sec)
                     /transl_table=11
                     /product="SelT/SelW/SelH family (seleno)protein"
                     /protein_id="HEX6669195.1"
                     /translation="MRVTIQYCVAUNYEPRAARLVAELKEAWPDTEVRLIPSSGGVFE
                     VKVDGEPIFSKKALHRHAEPGEVVGLIRARGSGGPAAAG"
     gene            2240..3319
                     /locus_tag="VF061_06535"
     CDS             2240..3319
                     /locus_tag="VF061_06535"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006002 - fructose 6-phosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent 6-phosphofructokinase"
                     /protein_id="HEX6669196.1"
                     /translation="MRVAISTGGGDAPGLNAVIRAVVLSAHYRGWRCYGIQRGYEGLL
                     SFNGVVPLGPAEVRGITHLGGTILGTTNRGNPFRYVTRDENGNESETDRSDDLVGAFQ
                     ASGFDALVSIGGDGSLQISHQLWCKGLPVVCVPKTIDNDVSGTQRTFGFDSAVSTATE
                     ALDKVHSTAESHDRVIVVELMGRYAGWIALYSGLSGSADVILLPEIPFDIEKVCDKIR
                     AREAAGRRFSIVVVAEGARPRDGAIELVERRGMGTVDRLGGIASKVARAIELRTGKET
                     RTLVLGHLQRGGSPTTYDRLLALRFGGAAVRAIADGAFGVMVGLNGPDITRVPLDEVV
                     GRAKNVALDGDIIATARELGISLGD"
     gene            3329..>5296
                     /locus_tag="VF061_06540"
     CDS             3329..>5296
                     /locus_tag="VF061_06540"
                     /inference="COORDINATES: protein motif:HMM:NF014896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEX6669197.1"
                     /translation="MPNYPPTRRSDAVEILHGEVIADPYRWLEDGASADTLRWTEAQN
                     ALTRSYLEAVPARDRIRARLDQLLAIGALGVPTPVRGRYFYLRRDGRQNHPVLYLRGG
                     VRGQDRPVVDPNALDAAGTVALDWYYPSDDGRLLAYGLSENGSEQSELQVLDVDTGTV
                     LADRIPHTRAADLAWLPDSTGFYYTRYPAPGDAPPGEEHYHRAIRFHRLGSDPATDPL
                     IFKPAEKEHWPSVGISPDGRWLVIGVARTFDQTDLHLMDLPSGTPPVAVAKDLPASFV
                     GEVAHGRLFLRTNLEAPTYRLYVVDPERPERARWREIVPPRADAVLDGVHVAARHLGL
                     SYLERASSRLRLTDHEGGDLRELTLPTLGSLFGVRGEWDGEELFYGFSSYTVPPAVYR
                     VDLATGAADLWQGVDADVDPARFEVRQVGVRSRDGTEVTMFLVHRSGLAKDGDNPVYL
                     TGYGGFNISMTPSFSRSLLLWLECGGVVAIPNIRGGGEYGERWHQAGMLGRKQNSFDD
                     FIAAAEWLITERYTTPARLAAAGGSNGGLLMGAVLTQRPDLFRAVVIQVPLLDMLRYH
                     RFLIARLWIPEYGSADDPEQFRWLRAYSPYHHVRDGVRYPAVLLATAESDSRVDPMHA
                     RKMAARLQAASASSRPVLLRLESKAGHGAGKP"
BASE COUNT          765 a         1838 c         1918 g          775 t
ORIGIN      
        1 ttcccgccga aggcccatgc gttcacgtaa atggcccgca tccgcgccgg cgcccggttg
       61 agcggcggcg cgggccagcg cacgggctgg tccatgccgg gcaccgcgaa gaacgattcc
      121 ggcatgaccg gcgcgggggg cagctcgtcg ccccaacggg aagcgtgctg tgccctgagc
      181 gaggcaacgt gcaggaaaat cgccagaatg ccgagcacga tgttgcggtg catgggtcct
      241 gatccgagaa aagagagcgc cggggcccac ctgggtgccc cggcgctctc agctccgcaa
      301 atcagaggcc cagcttgatc tcgactctcc gattggcggc gcgccccctc ggtgtgttgt
      361 ccgaggtgag aggaaatgca ccgccgtagc cgcgcgcctg cacctgctgg aagctcacac
      421 ccttggtcac cagatacgtg cgcaccgcct ccgcctggag gttgctcagg tgctgattct
      481 ccgccggcgt cccggagttg tcggtgtggg ccccgacctc gatcctgacc gtggtgtcgg
      541 ccttcaggat ctcggcgatg gaatcgagcg gcacgtacga ctgcggcagc agcctggccg
      601 agcccgccgc gaaggccacc cctgagatga ctcccggcgt gagacgaccc ctgagtgccg
      661 ccccggccgg gggggcccga ggcgcgggtg cgaccggtgc gggcgccggg gcctctgcgc
      721 gaggcgtggt ggtgtcccgg agggtccggt tgggcgccgc ccgctggggc gcaggctggg
      781 gcgcggcacc ctgggccgtg gggcagcccg tggcattgac ggtggcgccg gttggagtcc
      841 ggggacagcg gtccaagccg tccaggacgc cgtcgccgtc ctcgtcgccc gggcagccga
      901 gcgcgtccac cgtggcgccc ttgggcgtct cggagcagcg gtccaggccg tcgggaatgg
      961 cgtctccgtc gctgtcgcgc gggcagccgt tcgggtccac cagcaccccg gactcggtgt
     1021 ccgggcagcg gtcgaggccg tcggggatgt tgtccccgtc cgagtcccgg gtgcagccgg
     1081 tggcgttgac ctcggcaccc gggggggtat tggcgcagcg gtccacgccg tcgggcacgc
     1141 catcggcgtc gctgtcgctc gggcagccgg tcccgtccac ctgggccccg gcgggcgtat
     1201 cggggcaacg gtcgcggttc tcgaggatcc cgtccccgtc gctgtcgggg atcggcttgc
     1261 tccccagcat gtagctgagg cctacgctca cgcccacgtt ggtgaaggaa cggtcgggat
     1321 cctcactgcg atttcgggtc aggatcagat cgccccgcac gagtgcctcc ggggtgatgc
     1381 cgatcctcag gccggcgccc cccaccagcg cactgctgct cccacagatg aactgcgggg
     1441 cgacgctcgg gcagggatcg ccgaacctgg tggagccgcc cccggcccgc aggtgggccc
     1501 aggccttctg gccgagcagg atgttgtaca gcaccgagcc ggcgatggtc cgggtgctca
     1561 cgctcacccc cgtctcccgg gtctccgacc cggcgaacgc gccctcgagc tccaccgaga
     1621 aatggtaggg gagccagagt ccgacccggc cgacgccgcc gaaggcgctc ttgagctcgg
     1681 tgacgtcacc gtaggactgg gagagaccgc cggccccgag ctccaccaga tagcgtcgct
     1741 gctgggcctc gacggccgac ccgagctgga ggagcaaggc cagcgcgcag aggagcctga
     1801 gtccctcggc gaaggggcgg gaacggcggc ggtaggttcg catggatcaa atagatacgc
     1861 cgccagggcg aggctgacaa gacgtgccgt cacagcggcg aatccctctt ggcagcaccc
     1921 cccgggacgg ctacgattcg cggcggccct tcagcggaga gcggtaaatg cgtgtgacga
     1981 tccagtattg cgtcgcctga aactacgagc ccagggccgc caggttggtg gccgagctga
     2041 aggaggcgtg gcccgacacc gaggtccggc tgatcccgtc gtcgggcggc gtgttcgagg
     2101 tcaaggtgga cggtgagccg atcttctcca agaaggcgct gcatcggcac gcggagccgg
     2161 gggaggtcgt gggactgatc cgggctcggg gaagcggtgg gcccgcggcg gcagggtgag
     2221 cgaggtgtcc ggaaagacga tgcgggttgc gatctccacc ggcggcggcg acgcccctgg
     2281 tctcaacgcg gtcatccgcg cggtggtgct gtcggcccac taccggggct ggcgttgcta
     2341 cggcatccag cgggggtacg aggggctgct ctcgttcaac ggcgtggtgc cgctgggtcc
     2401 ggccgaggtt cgcggcatca ctcacctggg cggcaccatc ctgggcacca ccaaccgcgg
     2461 caaccccttc cgttatgtca cccgggacga gaacggcaac gagtccgaga ccgaccgctc
     2521 cgacgacctg gtgggcgcct tccaggccag cggcttcgac gcgctggtct ccatcggggg
     2581 cgacggcagt ctccagatct cccatcagct ctggtgcaag ggacttccgg tcgtctgcgt
     2641 gcccaagacg atcgacaacg acgtgagcgg cacccagcgc acgttcgggt tcgacagcgc
     2701 ggtgagcacc gcgaccgagg ccctggacaa ggtgcactcc accgccgaga gccacgaccg
     2761 ggtcatcgtg gtggagctga tgggccgcta cgcgggctgg atcgccctct acagcggcct
     2821 gtccggcagc gccgatgtga tcctgctccc ggagatcccg ttcgacatcg agaaggtgtg
     2881 cgacaagatc cgggcgcggg aggccgcggg ccggcggttc agcatcgtgg tcgtggcgga
     2941 gggcgcacgg ccccgcgacg gggccatcga gctggtcgag cgtcgcggca tgggcacggt
     3001 ggaccggctc ggcggcatcg ccagcaaggt cgcccgcgcg atcgagctca ggaccggcaa
     3061 ggagacgcgc accctggtgc tgggccatct ccagcgaggt ggctcgccca cgacctacga
     3121 ccggttgctc gccctccggt tcggcggcgc ggcggtccgg gccatcgccg acggagcctt
     3181 cggcgtcatg gtggggctca acggacccga catcacccgg gtgcccctcg acgaggtggt
     3241 cgggcgggcg aagaacgtcg cgctcgacgg cgacatcatc gcgaccgcgc gcgagctggg
     3301 gatcagcctc ggagactgac cccggtccat gccgaactat ccgcccaccc gcaggtcaga
     3361 cgcggtcgag atcctgcacg gcgaggtcat cgccgatccc taccgctggc tggaggacgg
     3421 cgcgagcgcc gacaccctcc ggtggaccga ggcgcagaac gcgctcaccc gatcctacct
     3481 cgaggccgtg cccgcccggg accggatccg cgcccgactc gaccagctcc tcgccatcgg
     3541 cgccctcggc gtcccgacgc ccgtgcgggg ccgctacttc tacctgcgcc gggacggccg
     3601 acagaaccac ccggttctct acctgcgggg aggagtccgg ggtcaggacc gcccggtcgt
     3661 ggatcccaac gctctcgatg ccgcgggaac ggtggccctc gactggtact atcccagcga
     3721 cgacgggagg ctcctcgcct acggcctgtc ggagaacggc agcgagcaga gcgagctgca
     3781 ggtgctggat gtggacaccg gcacggtgct cgccgaccgc atcccccaca cccgtgcggc
     3841 ggacctcgcc tggctgcccg attcgaccgg cttctactac acccgatatc cggcgccggg
     3901 agatgcgccg cccggcgagg agcactacca ccgcgcgatt cgcttccacc ggctcggcag
     3961 cgatcccgcg accgatccgc tgatcttcaa gccggcggag aaggaacact ggcccagcgt
     4021 cgggatctcc cctgacgggc gctggctggt gatcggtgtc gcgcggactt tcgaccagac
     4081 cgacctccat ctcatggacc tgccgagcgg gaccccgccc gtcgccgtgg cgaaggacct
     4141 gcccgcctcc ttcgtgggcg aggtggcgca cggacggctc ttcctgcgca ccaacctcga
     4201 ggccccgacc taccggctct acgtcgtgga tcccgagcgg ccggagcggg cccggtggcg
     4261 ggagatcgtg ccgccccggg cggacgcggt gctggatggc gtacatgtcg ccgcccgcca
     4321 cctcgggctg agctacctgg agcgggcctc ctcgcggctc cggctcacgg accacgaggg
     4381 gggcgacctc cgggagctga cgctgccgac gctcggcagc ctgttcggtg tgcgcgggga
     4441 gtgggacggg gaggagctct tctacggctt ctcgtcgtac accgtgccgc cggcggtgta
     4501 ccgggtggat ctcgccaccg gtgctgcgga cctgtggcag ggcgtggacg ccgacgtgga
     4561 tcccgcgcga ttcgaggtgc gccaggtcgg ggtgcgctcc agggacggca ccgaggttac
     4621 catgttcctg gtgcaccgct ccggtctggc gaaggacggc gacaacccgg tgtatctcac
     4681 gggctacggc ggattcaaca tcagcatgac cccgagcttc tcccgctcat tgctgctctg
     4741 gctggagtgc ggcggcgtcg tcgccattcc caatatccgg ggcgggggag agtatgggga
     4801 gcgctggcac caggcgggga tgctcggccg gaagcagaac agcttcgacg acttcatcgc
     4861 cgccgcggag tggctgatca cggagcgata tacgacgccg gcacggctgg cggcggccgg
     4921 aggatccaac ggcggcctgc tgatgggcgc ggtgctcacc cagcgccccg acctgttccg
     4981 cgcggtggtg atccaggtcc cgctgctcga catgctgcgc taccaccgct ttctcatcgc
     5041 gcggctgtgg attcccgagt acggctcggc ggacgacccg gagcagttcc ggtggctccg
     5101 ggcctactcg ccctatcacc acgtgcgcga cggcgtgcgc taccccgcgg tgctgctcgc
     5161 caccgccgag agcgactcgc gggtggatcc catgcacgcg cgcaagatgg cggcgcggct
     5221 ccaggcggcc agtgcgtcgt cccggcccgt ccttctccgg ctggagtcca aggcgggcca
     5281 cggggcgggg aagccg
//
LOCUS       DASUYN010000334         6703 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_549681, whole genome shotgun sequence.
ACCESSION   DASUYN010000334 DASUYN010000000
VERSION     DASUYN010000334.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6703)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6703)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6703
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_549681"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            68..844
                     /locus_tag="VF061_06545"
     CDS             68..844
                     /locus_tag="VF061_06545"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX6669198.1"
                     /translation="MTRLADARLTARWATVGGVRMFARTGGPSRPGASPTVVMVHGQV
                     ISSLYMVPTARLLAQDFPVLAPDLPGFGWSGKPRAVLSVRGMADALAGWMQAVELSSA
                     ALVAHSLGCQVAVDLAVRRPELVQRLVLAGPTMDPAARRAWVMVARWVRDWPFERPSL
                     GLAHLRDFALAGPRRALLTFRHALADRIEDKLPLIRVPTLVVRGERDPIAPQRWAEEA
                     VGLLPQGRLAVIPRGPHCVNYGTPVAFAGVVRAFLTGATA"
     gene            complement(834..1478)
                     /locus_tag="VF061_06550"
     CDS             complement(834..1478)
                     /locus_tag="VF061_06550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669199.1"
                     /translation="MRPHNGLRPSPVGWALAVCGTLALSACASKYAQVPPRLDLRPHG
                     QIALITFRAADEHRGMGELATRRFAEALLASQPGIELLELPATDSVLRSLPPGTDPVV
                     VAQALGQARNIPVVFVGELKVSDVKPRARIGVNDLNLRATVSAELGVRLLSTRAGGTL
                     WRSSSSASGTVGRVRLAGGLPSVSVRDTDDAYGDLVGSLVEYVTADLRPTWVKQ"
     gene            1624..1983
                     /locus_tag="VF061_06555"
     CDS             1624..1983
                     /locus_tag="VF061_06555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669200.1"
                     /translation="MVSRVPRRARPVSLVTLAGALLTLAGCAGVTPIGELMDNPAKYD
                     GKTVRVEGEVRESAGGLGLGAYQVRDDTGTLTVVSETGGPPRTGSKIGVKGRFQALIT
                     LGSRSLAVLREESRESR"
     gene            2065..2529
                     /locus_tag="VF061_06560"
     CDS             2065..2529
                     /locus_tag="VF061_06560"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEX6669201.1"
                     /translation="MPDGPSPEHVAAWRALLVAHADLTEGIDAALREAGVVPLRWYDA
                     LLALYEARGRRLRLAEMARAALLSRSGLSRLVARLEEAGLLTREPCEDDARGAYAVLT
                     PAGLQALRRCWRIYRAEIEARVGRRISVAEARTLRGLLGRLVEGEAARARPA"
     gene            2596..4011
                     /locus_tag="VF061_06565"
     CDS             2596..4011
                     /locus_tag="VF061_06565"
                     /EC_number="1.4.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HEX6669202.1"
                     /translation="MSLGASFLEQVNRAFDRAAGHTGHDPTLLANIKACKNLFYTSFP
                     IKRDDGSIEVMHAWRAEHSHHKLPTKGGIRYAETVDAEEVQALAALMTFKCALVDVPF
                     GGAKGGIRLNPKRYTPGELERITRRYVFELTRKNFIGPGLDVPAPDVGTGPREMAWIA
                     DTYTQLRSGEIDALGCVTAKPVSAGGIRGRVEATGRGVFYAVREVCNVGEDMKALGLA
                     TGLEGKRVVIQGLGNVGYHAAQFFQRAGALLVGLAESEGAIANPAGLDIESVMAYRQE
                     RRTILDFPGATNLARREDALELECDILIPAALERQITAENAPRLRARMVVEAANGPTT
                     VEADEILGQKGVMVIPDAYVNAGGVTVSYFEWVKNLGHVRFGRMQKRFEQGAYGRLLE
                     AVESVSGRSFTPAEVERVTQGASEEDLVNSGLEETMIGAYHPIRDVWKRFGGKEDMRT
                     AAMIVAIDKVATSYAQLGIFP"
     gene            complement(4019..6655)
                     /locus_tag="VF061_06570"
     CDS             complement(4019..6655)
                     /locus_tag="VF061_06570"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX6669203.1"
                     /translation="MAAISNPLADALRDRYVLERVLGRGGMATVYLARDLKHDRHVAL
                     KVLDPDVAASLGPERFQREIRVAARLHHPHVLSVYDSGEAAGRLWFTMPYVRGESLRE
                     RLRREGILPIDEALRITRQAAQALSYAHKEGVVHRDVKPENLLLTEDGSTQVADFGIA
                     RAVEGQGDQQLTEIGVALGTPAYMAPEQSSGDGTLDARADQYALAATCHEMLTGAPPF
                     TGTSSHDLIVRRFTTPAPKVRTSRPEVAPDVEEALQRALALKPTDRFATIADFGAALG
                     GGQFTTTDPSAAAPAGPGRRRRRVLWAAGVAAALAATAFLYSRIAAPAGGAALASAGG
                     VTRPTRLAVLPFENLGDSADEYFADGIADEVRGKLAVVSGLEVIARSSSSRYGGEDRS
                     PQDIARDLDVQYLLTGTVRWEKRPGEASRVRVSPELVDARSGTTRWQRSFDAALTDVF
                     EIQGQIAGDVADALNVALAPPARRGLAARPTQSLEAYTLYLHGRDLRSGEVAPDALRG
                     ALAAFRRAVEIDPGFAAAWAELAAGHVDALRLGGMRADDAEQARIAVERAEALAPESP
                     DTRKARGRYAHVVRGGPAAALAEYRAALRSAPNRSDLLDAAAEAEVDLAMWSEAVVDL
                     EQAARVDPQSPDVIGDLGVAYMRLRRFGDARAMLERARALRPGSMSLAHNRARLAAME
                     GDIGGIRQVFRTMEQIVGRRRFVAYVALREDLVWALDDEGRRTLLTLTPADLDGSVAD
                     LAVAKAQVHWLRGERALARVWGDSAAAAFTTLLAQYGQQLHRNQLVAMRGLGLAYAGR
                     HEEAVAEALRAEAEQPKDQNSQTSYVRYAVARIHVLAGKPDAAIDRLEALVAEPGLRS
                     AGLFRIDPNFDPIRNHPRFVWR"
BASE COUNT          927 a         2406 c         2464 g          906 t
ORIGIN      
        1 gagccgctga ggacgtcgtc cggccgagtt gagtcggcga ggcgaggcgg gcagatttcc
       61 ggtcatcatg actcgcctcg ccgacgcacg gctgaccgcc cgctgggcga ccgtcggtgg
      121 ggtgcggatg ttcgcccgga cgggcggccc ttcgcggccg ggcgccagcc cgaccgtggt
      181 gatggtgcac ggtcaggtga tctccagcct ctacatggtc ccgacggcgc gcctgctcgc
      241 acaggacttc cccgtgctcg ccccggacct cccggggttc ggctggagcg gcaagccgcg
      301 ggcggtgctg agtgtccggg ggatggccga tgctctcgcg ggatggatgc aggcggtgga
      361 gctctcgtcc gccgcgctgg tggcgcactc gctgggatgt caggtggcgg tggatctcgc
      421 cgtacgacgg cccgagctgg tgcagcgcct ggtgctcgcg ggcccaacga tggatccggc
      481 cgcgcggagg gcgtgggtga tggtagcccg ctgggtgcgg gactggccct tcgagcggcc
      541 ttcgctgggc ctggcgcacc tgcgggactt cgcgctcgcg ggcccgagac gggccctgct
      601 gaccttccgc cacgcgctcg cggacaggat cgaagacaaa ctgcccctga tacgggtgcc
      661 gacgctcgtg gtgcgcggcg agcgcgaccc gatcgcgccg cagcgctggg cggaagaggc
      721 ggtgggtctc ctgccgcagg gccggctcgc cgtcattccc cgcggtccgc actgcgtgaa
      781 ctacggcacg cccgtcgcct tcgccggggt cgtccgggct ttcctgaccg gcgctactgc
      841 ttgacccagg tgggccgcag gtcggcggtg acgtactcca ccagcgagcc gacgaggtcg
      901 ccgtaggcgt cgtcggtatc gcgcaccgag acggagggca gcccgccggc gagcctgacc
      961 cggcccaccg tgccgctggc ggatgagctc gagcgccaga gggtaccacc ggcgcgggtg
     1021 gacaggagcc gcaccccgag ctcggccgag accgtggccc gcaggttcag gtcgttcacg
     1081 ccgatccggg cgcggggctt cacgtccgac accttcagct cgcccacgaa gacgaccggg
     1141 atgtttcggg cctggcccag cgcctgggcc acgacgacgg gatcggtgcc tggcggcagg
     1201 gagcgaagca cggagtcggt ggcgggcagc tccagcagct cgatccccgg ctggctcgcc
     1261 agcagcgcct cggcgaagcg gcgggtggcc agctcaccca tcccccggtg ctcgtccgcg
     1321 gccctgaagg tgatcagggc gatctgccca tgggggcgga ggtccaggcg gggcgggacc
     1381 tgggcgtact tcgacgcgca ggcggagagc gccagggtgc cgcagaccgc gagggcccac
     1441 ccgacgggcg aggggcgcag accgttgtga ggacgcatgt tgggcatcac ccgagtgggg
     1501 gagcccgccc agccaagcaa gaggtgcgcc gccccgcctc gccaaaatgc cggagccgag
     1561 acaacttcac ccctatgccg atggagcagt cccgtgaccc cttctccgat ccggagtccg
     1621 accatggttt cccgcgtccc ccgtcgtgcc cggcccgtct ccctggtgac cctggccggc
     1681 gcgctgctca ccctcgccgg ctgcgccggc gtcacgccga tcggcgagct gatggacaac
     1741 cccgcgaagt acgatggcaa gacggtgcgg gtcgagggcg aggtgaggga gtccgccggc
     1801 ggtctgggcc tgggcgccta ccaggtccgg gacgacaccg gcacgctcac cgtggtgagc
     1861 gagaccggcg gaccgccccg caccggatcg aagatcggtg tgaagggccg gttccaggcg
     1921 ctgatcaccc tgggctcccg cagtctcgcc gtgctgcgcg aggagagccg ggagtcgcgc
     1981 tgagcgcggc cggaacatag ttgctctcgc aaccagctcc gcgaggtggt tgcgaccgca
     2041 agtattcggc ctatcctggg ggccatgccc gacggacctt cccccgagca cgtcgccgcc
     2101 tggcgggcgc tgctcgttgc ccatgccgac ctcaccgagg ggatcgacgc cgccctgcgc
     2161 gaggcggggg tcgtcccgct ccgctggtac gacgccctgc tggccctgta cgaggcgcgg
     2221 ggccgccggc tccgcctcgc cgagatggcg agggcggcgt tgctcagccg gagtgggctc
     2281 tcccggttgg tggcccggct ggaggaggcc gggctgctca cccgggagcc gtgcgaggac
     2341 gacgcccgcg gcgcgtacgc ggtgctgacg cccgccgggc tccaggcctt gcggcgctgc
     2401 tggcggatct atcgggccga gatcgaggct cgggtgggac gccggatctc ggtggcggaa
     2461 gcgcgaaccc tgcgcggcct cctcggccgg ctggtggagg gcgaggcggc gcgagcgcgt
     2521 ccggcctgac tcgcagcccg gcgggatcag cctatattcg tcgcacccaa tccctcagcc
     2581 ttccgcgaga cgaccatgtc cctcggtgcc agcttcctcg agcaggtgaa ccgggccttc
     2641 gatcgtgccg ccggccacac cggccacgat cccaccctcc tcgccaacat caaggcctgc
     2701 aagaacctct tctacaccag ctttcccatc aagcgcgacg acgggagcat cgaggtgatg
     2761 cacgcgtggc gggcggagca cagccaccac aagctcccga ccaagggcgg catccgctat
     2821 gccgagacgg tggatgccga ggaggtgcag gcgctcgccg cactgatgac cttcaagtgc
     2881 gcgctggtgg acgtcccctt cggcggcgcc aagggcggca tccggctcaa tcccaagcgg
     2941 tacacgccgg gggagctgga gcggatcacg cgccggtacg tcttcgagct gacccgcaag
     3001 aacttcatcg gccccgggct cgacgtcccc gcgccggacg tgggcaccgg gccgcgggag
     3061 atggcctgga tcgccgacac ctatacccag ctccgctcgg gggagatcga cgccctcggc
     3121 tgcgtcaccg cgaagccggt gagcgccggc ggcatccgcg ggcgggtgga agccacgggc
     3181 cgcggggtct tctacgccgt gcgcgaggtc tgcaacgtgg gggaggacat gaaggcgctc
     3241 ggtctcgcga ccgggctcga gggcaagcgg gtcgtgatcc aggggctcgg caacgtgggc
     3301 taccacgccg cccagttctt ccagcgcgcg ggcgcgctgc tggtgggtct ggcggagtcc
     3361 gagggcgcga tcgcgaaccc ggcggggctc gacatcgagt cggtgatggc ctaccggcag
     3421 gagcgccgga cgatcctcga cttccccggc gccaccaacc tcgcccgccg ggaggacgcg
     3481 ctggagctgg agtgcgacat cctcatcccc gccgccctcg agcgccagat cacggccgag
     3541 aatgcgcccc gactccgggc caggatggtg gtcgaggcgg ccaacgggcc cacgaccgtg
     3601 gaggccgacg agatcctggg ccagaagggc gtcatggtca tccccgacgc gtacgtcaac
     3661 gccggcggcg tgacggtctc ctacttcgaa tgggtgaaga acctcggtca cgtgcggttc
     3721 gggcggatgc agaagcgctt cgagcagggc gcctacggcc ggctgctgga ggcggtggag
     3781 agcgtgtcgg ggcgcagctt caccccggcg gaagtcgagc gggtgaccca gggcgcgagc
     3841 gaggaggacc tggtgaactc ggggctggag gagaccatga tcggggccta ccaccccatc
     3901 cgtgacgtct ggaagcggtt cggtgggaag gaagacatgc ggaccgccgc gatgatcgtc
     3961 gccatcgaca aggtggcgac cagctacgcg cagctgggga tctttccctg atctcgcgct
     4021 agcgccagac gaaccgcgga tgattccgga tcggatcgaa gttgggatcg atccggaaca
     4081 gccccgcgga cctgagcccc ggctccgcca ccagcgcctc caggcggtcg atcgccgcgt
     4141 ccggctttcc cgcgagcaca tggatccgcg ccacggcgta gcggacgtag gacgtctggc
     4201 tgttctggtc cttgggctgc tccgcttccg cccgcagcgc ttcggccacc gcctcctcgt
     4261 gccgcccggc ataggccagt cccagccccc gcatcgcgac gagctggttg cggtgcagct
     4321 gctgtccgta ctgggccagc agcgtggtga acgcggcggc ggcgctatca ccccagaccc
     4381 gcgccagcgc ccgctccccc cgaagccagt ggacctgcgc cttggccacg gcgagatccg
     4441 ccacgctgcc gtcgaggtcc gccggcgtca gcgtcaagag ggtgcggcga ccctcgtcgt
     4501 ccagcgccca caccagatcc tcgcgcagcg ccacgtaggc cacgaagcgc cggcgcccca
     4561 cgatctgctc catggttcgg aacacctgcc ggatcccccc gatgtcgccc tccatggcgg
     4621 cgagccgggc gcgattgtgg gcgaggctca tgctgcccgg ccgcagcgcg cgggcccgct
     4681 ccagcatcgc ccgggcgtcg ccgaaccggc gcaggcgcat gtacgcgacg ccgaggtcgc
     4741 cgatcacgtc gggcgactgg gggtccaccc gggcggcctg ctccaggtct accacggcct
     4801 cgctccacat cgcgagatcc acctccgcct ccgccgcggc atcgagcaga tcgctccggt
     4861 tcggcgcgct ccggagcgcc gcccggtact cggccagcgc ggccgccggc ccgccgcgga
     4921 ccacgtgggc gtagcgcccc ctcgccttcc gcgtgtccgg cgactccggc gcgagcgcct
     4981 ccgcgcgctc gaccgcgatc cgcgcctgct ccgcatcgtc ggctcgcatg ccgccgagcc
     5041 gcagcgcatc cacgtgcccc gcggccagct cggcccaggc ggcggcgaaa cccggatcga
     5101 tctccaccgc gcgccggaag gcggcgaggg cgccgcgcag cgcgtcgggg gccacctccc
     5161 ccgagcgcag gtcgcggccg tggagataga gggtgtaggc ctccaggctc tgggtgggcc
     5221 gcgcggccag cccccgccgc gccggcggcg cgagggcgac gttgagggcg tcggccacgt
     5281 cgccggcgat ctgcccctgg atctcgaaca cgtcggtgag cgcggcgtcg aacgaccgct
     5341 gccaccgggt ggtgccggac cgcgcgtcca ccagctccgg actcacgcgg acgcgagagg
     5401 cctcccccgg ccgcttctcc cagcgcacgg tgccggtcag caggtactgg acgtccagat
     5461 cccgcgcgat gtcctggggt gacctgtcct ctccgccgta gcgactggag ctcgaccggg
     5521 cgatcacctc cagtcccgag accacggcga gcttgccgcg cacttcgtcc gcgatcccgt
     5581 cggcgaagta ctcatcggcc gagtcgccga gattctcgaa cggcaggacc gccagccggg
     5641 tgggccgggt cacgccgccg gcgctggcga gcgccgcccc accggcgggg gcggcgatgc
     5701 gggaatagag gaaggccgtc gccgcgagag ccgcggccac tccggcggcc cagagcaccc
     5761 ggcgccgcct gcgcccgggg ccggccggcg cggccgcgga gggatcggtg gtggtgaact
     5821 ggccgcctcc gagcgcggcc ccgaagtccg cgatggtggc gaagcggtcg gtcggcttga
     5881 gcgccagcgc gcgctgcaac gcctcctcga cgtcgggcgc gacctccggc cgggaggtcc
     5941 gcaccttcgg ggccggggtg gtgaaacgcc ggacgatgag gtcgtgcgac gaggtgccgg
     6001 tgaacggcgg tgcgccggtg agcatctcgt ggcaggtggc cgcgagggca tactggtcgg
     6061 cgcgggcgtc cagggtgccg tcgcccgagg actgctccgg cgccatgtac gcgggcgtgc
     6121 ccaacgccac cccgatctcg gtgagctgct ggtccccctg cccctcgacg gcccgcgcga
     6181 tcccgaagtc cgccacctga gtggagccgt cctcggtgag gagcaggttt tccggcttca
     6241 cgtcccggtg caccacaccc tccttgtggg cgtagctcag cgcctgcgcc gcctggcggg
     6301 tgatccggag ggcctcgtcg atcgggagaa tcccctcgcg gcggagccgc tcgcggaggc
     6361 tctcgcctcg gacatagggc atggtgaacc agaggcggcc ggccgcctca cccgaatcgt
     6421 agaccgagag cacgtgggga tggtggagcc gggccgcgac gcggatctcg cgctgaaacc
     6481 gctccgggcc gagcgaggcc gccacgtcgg ggtcgagcac cttgagggcg acgtgacggt
     6541 cgtgcttgag atcccgcgcc aggtagacgg tcgccatccc cccgcgtccg agcacgcgct
     6601 ccagcacgta acggtcgcgc aatgcgtcgg ccagaggatt ggagatggcg gccacggaag
     6661 ttgggactgg gatgcagcgg aatctcaccc cgcggccacc cgg
//
LOCUS       DASUYN010000335         2739 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1431883, whole genome shotgun sequence.
ACCESSION   DASUYN010000335 DASUYN010000000
VERSION     DASUYN010000335.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2739
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1431883"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..562)
                     /locus_tag="VF061_06575"
     CDS             complement(<1..562)
                     /locus_tag="VF061_06575"
                     /inference="COORDINATES: protein motif:HMM:NF013226.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiA family prenyltransferase"
                     /protein_id="HEX6669204.1"
                     /translation="MSGARAAGYRLLGRRLDYLLHLRPAEWPIMAAHTALGYLLAVGL
                     RGAAQGEQVGSAVLGLVLWVVCLNGGTLALNSAFDRDEGDIAYLRNPPPPPRRLAACA
                     LALMGAGQVASFALPPLFGALYALCFVLSVLYSVPPVRLKATAGADWLINMAGFGTLT
                     PLAGWATTGRPLDAVAWLVLLGFCPLF"
     gene            complement(559..1338)
                     /locus_tag="VF061_06580"
     CDS             complement(559..1338)
                     /locus_tag="VF061_06580"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: protein motif:HMM:NF009855.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III pantothenate kinase"
                     /protein_id="HEX6669205.1"
                     /translation="MLLTLDIGNTEITAGLFQGETLEAHWRLTTNPERTPDEWAAALG
                     GFLIQAGFSPNEVAAVCLASVAPTVTQSLVAGIATITRCTAVVVDARSPLPVTLDVDE
                     PLTVGADRIVNVLAAVAFYRADTIVVDFGTATTFDCITADSRFIGGVIMPGLRTAADQ
                     LTRRTAKLPATELRAPARVIGRRTEECIQAGVLYGTAEAVDGIVRRIRAEWPGGASPR
                     VVATGGLAPVVAPLTSSIELTHADLTLQGIRIAAGHLGLSW"
     gene            complement(1348..2070)
                     /locus_tag="VF061_06585"
     CDS             complement(1348..2070)
                     /locus_tag="VF061_06585"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR00121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004077 - biotin-[acetyl-CoA-carboxylase]
                     ligase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HEX6669206.1"
                     /translation="MIPALLRFPVVGSTMDLLHELAAEGAEAGTIVVAGEQTSGRGSR
                     GRLWRSPPGGLWLSALYRPSAIARVELVGLRAGLAVAEAIEAIGPALRVGLKWPNDLI
                     VDDRKVGGILCEARWQGELLSWVVVGIGVNVANPLLSDLTAGAIRLADRLPNADPDSL
                     EPEVTRRLRALDASGDRLAPAVLSDLRSRDWLRGRRLHGPAAGTAEGIADDGALLVRE
                     PGGHLRAVRAGTVELAEPSLMP"
     gene            complement(2073..>2739)
                     /locus_tag="VF061_06590"
     CDS             complement(2073..>2739)
                     /locus_tag="VF061_06590"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: protein motif:HMM:NF001389.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0050380 - undecaprenyl-diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0016311 - dephosphorylation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HEX6669207.1"
                     /translation="KSFDIFIQLGAILAIVWLYRARLLHAVRSVRTDPASRRFFLNLA
                     ISFVPAAGVGFLIHDWIKERLFNTPVVAWALILGGIAILLIERWSPRTRFEEVSDVPP
                     LTALGVGLAQVLSLIPGTSRSGATIMGGYALGLSRRAATELSFFLAIPIMFAATLYDL
                     AKSAGALAPADAPFFATGFAVSFVSALVVVKMFLAYVSHHSFAAFAWYRIAFGAALLW
                     LAA"
BASE COUNT          458 a          969 c          992 g          320 t
ORIGIN      
        1 cgaacagcgg gcagaacccg agcagcacca gccaggcgac ggcgtccagc gggcgcccgg
       61 tggtcgccca ccccgccagc ggagtcaggg tgccgaaccc ggccatgttg atcagccagt
      121 cggccccggc ggtggccttg agcctgaccg gcggtaccga gtacagcacg gagagcacga
      181 agcagagcgc gtagagcgcc ccgaagagcg gcggcagcgc gaatgacgcg acctggccgg
      241 cccccatcag ggccagggcg catgccgcca ggcggcgcgg tggcggtggc gggttcctga
      301 ggtaggcgat gtcgccttcg tcccggtcga aggcgctgtt gagcgccagg gtgccgccgt
      361 tgaggcacac gacccagagc accagcccga gcaccgcgga gccgacctgt tcgccctggg
      421 ccgcgccccg gaggcccacc gcgagcaggt agcccagcgc cgtgtgcgcg gccatgatcg
      481 gccactcggc gggacgcagg tggaggaggt agtcgagtct gcggccgagg aggcgatacc
      541 ccgccgcccg cgcgccgctc accagctcag gccgagatgg ccggccgcga tccgaatgcc
      601 ctgcagggtg agatcggcgt gggtcagctc gatcgagctg gtgagcggtg ccacgaccgg
      661 cgcgaggcca ccggtcgcca ccacccgagg cgaggcgcca cctggccact ccgccctgat
      721 ccgccggacg atgccatcga ccgcctccgc cgttccgtag agcacgcccg cctggatgca
      781 ctcctcggtg cgccggccga tgacccgcgc gggagccctg agctcggtgg cgggtagctt
      841 ggcggtccgc cgggtgagct ggtccgcggc ggtgcgtaac ccgggcatga tcaccccacc
      901 gatgaagcgc gaatcggcgg tgatgcagtc gaacgtcgtc gcggtgccga agtccaccac
      961 gatcgtgtcc gcgcggtaga acgcgacggc ggcgagcacg ttgacgatgc ggtcagcgcc
     1021 gacggtgagc ggctcatcca cgtccagcgt caccggcagg ggcgaacggg cgtccaccac
     1081 cacggccgtg caccgcgtga tcgtcgcgat gcccgccacc aggctctgcg tcacggtcgg
     1141 ggcgaccgag gccaggcaga ccgccgccac ttcgttgggc gagaagcccg cctggatcag
     1201 gaagccgccg agcgcggccg cccactcatc gggtgtgcgc tcggggttgg tggtgagccg
     1261 ccagtgcgct tccagcgtct cgccctggaa gaggccggcg gtgatctcgg tgttaccgat
     1321 gtcgagggtg aggagcatgg gtcgaagcta cggcatgagt gagggctcgg ccaactcgac
     1381 cgtccctgcg cgaaccgccc ggaggtgccc accgggctcc cgcaccagga gcgcgccgtc
     1441 gtccgcgatg ccctcggcgg tgccggccgc cggaccgtgg aggcgccgcc cccgcagcca
     1501 gtcacggctt cggaggtcgg acaacaccgc cggcgcgagc cggtcaccgg acgcatcgag
     1561 cgcccggagc cgccgcgtta cctcgggctc caacgagtcc gggtccgcgt tcggcaatcg
     1621 gtcggccagg cgtatggcgc ccgcggtgag gtcggagagg agcgggttgg cgacgttcac
     1681 cccgatgccc acgaccaccc aggacagcag ctcgccctgc cagcgcgcct cgcacaggat
     1741 cccgccgacc ttgcggtcgt ccacgatcaa gtcgttgggc cacttgaggc cgactcgaag
     1801 cgcgggaccg atcgcctcga tggcctcggc gacggcgaga cccgcccgga gaccgacgag
     1861 ctccacccgg gcgatcgcgg agggccggta cagcgcgctg agccagagcc cgcccggggg
     1921 agaccgccag agccggcccc gagacccgcg gcccgacgtc tgctcgcccg ccacgacgat
     1981 ggtgcccgct tccgcgccct ccgccgccag ctcgtggagc aggtccatcg tcgaaccgac
     2041 cacggggaac cgcagcaggg ctgggatcac cctcacgccg cgagccagag cagcgccgcc
     2101 ccgaacgcga tccggtacca ggcgaatgct gcgaagctat ggtgggacac gtaggcgagg
     2161 aacatcttca ccacgaccaa cgccgagacg aaagagaccg cgaaaccggt ggcgaagaac
     2221 ggcgcgtccg ccggggcgag cgcgccggcg ctcttggcca ggtcgtagag cgtggcggcg
     2281 aacatgatcg gtatggcgag aaagaaggag agctcggtgg ccgcgcggcg ggagaggccg
     2341 agcgcgtacc ctcccatgat cgtcgcgccc gagcgtgacg tccccgggat cagcgagagg
     2401 acctgcgcca gtcccacgcc gagtgcggtg agcggcggaa cgtcgctcac ctcctcgaac
     2461 ctggttcgag gcgaccaccg ctcgatgagc aggatggcga tcccgcccag aatcagggcc
     2521 caggccacca ccggcgtgtt gaacagccgc tccttgatcc agtcgtggat gaggaacccg
     2581 acgcccgccg cggggacgaa ggagatcgcc aggttgagaa agaaccgccg gctggccgga
     2641 tcggtacgca ccgaccggac ggcatggagc agccgcgccc ggtagagcca gacgatcgcc
     2701 aggatcgccc cgagctgaat gaagatgtcg aagctcttg
//
LOCUS       DASUYN010000336         3151 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_331235, whole genome shotgun sequence.
ACCESSION   DASUYN010000336 DASUYN010000000
VERSION     DASUYN010000336.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3151)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3151)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3151
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_331235"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..445)
                     /locus_tag="VF061_06595"
     CDS             complement(<1..445)
                     /locus_tag="VF061_06595"
                     /inference="COORDINATES: protein motif:HMM:NF016130.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF411 domain-containing protein"
                     /protein_id="HEX6669208.1"
                     /translation="MISRRSFLAQTAALGASLAGGKSAWAAVAAADPKTMTIYMSPTC
                     GCCAKWVEHVEAAGFKAVVHEDEDMDTVKDSLGVPRDMRSCHTAQIEKYLIEGHVPAE
                     DIKSLLAKKPEAAGLAAPGMPASSPGMAVPGQPHEAYDVLLFRRDG"
     gene            complement(459..1781)
                     /locus_tag="VF061_06600"
     CDS             complement(459..1781)
                     /locus_tag="VF061_06600"
                     /inference="COORDINATES: protein motif:HMM:NF039904.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEX6669209.1"
                     /translation="MTHGRRSGAAKRSKATHADIEIIRDPLWDNIRLDRPALLALDTP
                     TVQRLRYVRQVGHAFLVYPGATHTRFEHALGAYHLTKRALAALEERGELGPVPAEDRL
                     AVRLAALLHDVGHYPFSHALEEAGFPSHEQLGIAKLSRGELGDRLVEIGGPAFADVVG
                     RLIGGASESPLQGLISGSLDLDKIDYLSRDAHMCGVPYGTVDVDRLLSTLTLVETDGG
                     RFEVGVQEKGVSALESLLFAKYQMYRNVYWHHAVRSATCMFKRAVREAVRRGEVTAET
                     VAEATDDGLMELLITRNPHGLAAAIRARRLYKRALDLPASDVPAEVQPWVADDPGLLE
                     RVEDWVAVGVGLDPGELLLDFPARSSMLGVDLPLRTRGGTIERLTDAGRAGQLGLPRV
                     ADELYRSARRLRVFVARMPARSLEGVLDLLTCPAEEITRRMADEVSLV"
     gene            complement(1778..>3151)
                     /gene="pckA"
                     /locus_tag="VF061_06605"
     CDS             complement(1778..>3151)
                     /gene="pckA"
                     /locus_tag="VF061_06605"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: protein motif:HMM:TIGR00224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004612 - phosphoenolpyruvate
                     carboxykinase (ATP) activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HEX6669210.1"
                     /translation="ERIWWEKNPRLDPAAFERLHEDVRGHLDARDVFVQDLFAGADPA
                     YRVPVRFVTPNAWHALFVRNMFIRAMPAELAQFRPGFTVLHAPDFQADPSRHGTRTGT
                     FVVINFGKKLVLIGGTRYAGEMKKSIFTALNYHLPAQSVMPMHCSANVGPAGDAAIFF
                     GLSGTGKTTLSADPGRQLIGDDEHGWSDRGVFNFEGGCYAKVIRLRAESEPEIYAATQ
                     MFGTVLENVVIDPTTRAADFDAEHLTENTRACYPIHYIPNHLPSGAGTHPQNIVFLTA
                     DAFGVMPPIARLTAEQAMYHFLSGYTAKVAGTERGVTEPSATFSACFGAPFLPLHPGV
                     YARMLGEKISRHGARVWMVNTGWTGGPYGTGSRMKLAYTRAMVRAALAGALDGVRFVR
                     DPVFGFEVPTAVPDVPGNVLTPRNTWSDPAAYDAQARKLATMFRENFEQYRAQVPEAV
                     AAAGPSL"
BASE COUNT          453 a         1111 c         1118 g          469 t
ORIGIN      
        1 ggccgtcccg gcggaacagg agcacgtcgt acgcctcgtg cggctggccc ggcaccgcca
       61 tccccgggga gctggccggc atgccgggcg ccgcaagccc cgccgcctcc ggcttcttcg
      121 ccaggagtga cttgatgtcc tccgcgggca cgtggccctc gatcaggtac ttctcgatct
      181 gcgcggtgtg gcaggagcgc atgtcccggg gcacaccgag gctgtccttg accgtgtcca
      241 tgtcctcgtc ttcatgcacc acggccttga agcccgcggc ctcgacgtgc tccacccact
      301 tcgcgcagca gccgcaggtc gggctcatgt agatggtcat ggtcttcggg tcggcggccg
      361 cgacggcggc ccaggccgac ttgccgcccg ccagcgaggc cccgagtgcg gcggtctgcg
      421 ccaggaacga gcgccgtgaa atcatcgtgt caccctcgtc aaaccagtga aacctcgtcc
      481 gccatccggc gggtgatctc ctcggccggg caggtcagga ggtcgagcac cccctccagc
      541 gatcgcgccg gcatgcgtgc cacgaacacc ctcaggcggc gcgcgctccg gtagagctcg
      601 tccgcgaccc tcggcaggcc cagctgtccg gcgcgccccg cgtcggtcag ccgctcgatg
      661 gtgccgcccc gggtgcggag cggcaggtcg acgcccagca tggacgagcg cgcgggaaag
      721 tcgagcagca gctcccccgg gtcgagcccg accccgaccg ccacccagtc ctccacccgc
      781 tccagcagtc cggggtcgtc agcgacccag ggctggacct ccgcgggaac gtcgctcgcg
      841 ggcaggtcga gcgcccgctt gtagagcctt cgcgcccgga tcgcggccgc cagcccgtgg
      901 ggattgcggg tgatgagcag ctccatcagg ccgtcgtcgg tggcctccgc gaccgtctcc
      961 gcggtgacct caccccgccg caccgcctct cgcaccgcgc gcttgaacat gcaggtggcg
     1021 gaccgcaccg cgtggtgcca gtatacgttg cggtacatct ggtacttggc gaagagcagg
     1081 gactcgagcg cgctcacacc cttctcctgc accccgacct cgaatctccc gccgtccgtc
     1141 tccaccagcg tcagggtgga gagcagccgg tccacgtcca ccgtcccgta gggcaccccg
     1201 cacatgtggg cgtcgcggct caggtaatcg atcttgtcca ggtcgagcga gccggaaatc
     1261 aagccctgca gcgggctctc gcttgcgccg ccgatgaggc gccccaccac gtccgcgaac
     1321 gcggggccgc cgatctcgac cagccggtcg cccagctcgc cgcgggagag cttggcgatc
     1381 ccgagctgct cgtgcgaggg gaagcccgcc tcttcgagcg cgtgagagaa gggatagtgc
     1441 cccacgtcgt gcagcagcgc ggccaggcgg acggccagtc ggtcttcggc cgggaccggg
     1501 cccagctcac cccgctcctc caacgcggcc agcgcgcgct tggtcaggtg ataggcgccg
     1561 agggcgtgct cgaagcgggt gtgggtcgcc ccggggtaga ccaggaaggc gtgcccgacc
     1621 tgccggacgt agcgcaggcg ctggacggtg ggtgtgtcga gcgcgagcag ggccggccgg
     1681 tcgagccgga tattgtccca gagagggtcg cggatgatct cgatgtcggc gtgcgtcgcc
     1741 ttgctgcgct tcgctgctcc gctccgccga ccgtgggtca caagctcggt cccgccgccg
     1801 ctacggcctc gggtacctgg gctcggtact gctcgaagtt ctcccggaac atggtggcga
     1861 gcttccgggc ctgcgcgtcg taggcggccg gatcggacca ggtgttccgc ggcgtgagga
     1921 cgttcccggg gacatcgggc accgcggtcg gcacctcgaa gccgaagacc gggtcccgca
     1981 cgaagcggac gccgtcgagc gcaccggcga gcgccgcgcg caccatggcc cgggtgtagg
     2041 ccagcttcat ccgcgacccg gtgccgtagg gccccccggt ccagcccgtg ttcaccatcc
     2101 acaccctggc gccgtgacgg gagatcttct cacccagcat ccgggcgtat accccggggt
     2161 ggagcggcag gaacggcgcg ccgaagcagg ccgagaacgt ggccgagggc tccgtgacgc
     2221 cgcgctcggt cccggcgacc ttcgccgtgt agccggagag gaagtggtac atcgcctgct
     2281 cggccgtgag ccgcgcgatc ggcggcatga cgccgaaggc gtccgcggtg aggaagacga
     2341 tgttctgcgg gtgggtcccg gccccgctcg ggagatggtt ggggatgtag tggatggggt
     2401 aacaggcccg ggtgttctcg gtgaggtgct cggcgtcgaa gtccgcggcc cgggtggtcg
     2461 ggtcgatcac cacgttctcc agcaccgtcc cgaacatctg agtggccgcg taaatctccg
     2521 gctcggactc ggcgcggagc cggatgacct tggcgtagca cccgccctcg aagttgaaca
     2581 ccccgcggtc actccagccg tgctcgtcgt cgccgatgag ctggcggccg gggtcggcgg
     2641 agagcgtcgt cttcccggtg cccgagaggc cgaagaagat ggcggcgtca cccgcggggc
     2701 ccacgttcgc cgagcagtgc atcggcatca cactctgggc gggcaggtgg tagttcaggg
     2761 cggtgaagat ggacttcttc atctcgcccg cgtagcgggt cccgccgatc agcaccagct
     2821 tcttgccgaa gttgatgacg acgaaggtgc cggtgcgggt gccgtggcgc gacgggtcgg
     2881 cctggaagtc gggggcgtgc aggaccgtga acccgggccg gaactgggcc aattccgccg
     2941 gcatggcgcg gatgaacatg ttccggacga acagcgcgtg ccacgcgttc ggggtcacga
     3001 accgcaccgg aacgcgatag gccgggtcgg cgcccgcgaa cagatcctgg acgaacacgt
     3061 cgcgcgcgtc gaggtggccg cggacgtcct cgtgcaggcg ctcgaacgcc gccggatcca
     3121 gccgcgggtt cttctcccac cagatccgct c
//
LOCUS       DASUYN010000337         2045 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1873901, whole genome shotgun sequence.
ACCESSION   DASUYN010000337 DASUYN010000000
VERSION     DASUYN010000337.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2045
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1873901"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..718)
                     /locus_tag="VF061_06610"
     CDS             complement(<1..718)
                     /locus_tag="VF061_06610"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX6669211.1"
                     /translation="MPRVNVNGIGLFYQDLGAPSGDPVVLIMGWGGDHTAWAFQVQAL
                     AATHRVIALDNRGAGQSDQPDAPYSIPGMAEDVVGLMEALGLARAHICGASMGGMIAQ
                     ELALRHPARVRSLQLHCTLGRIDAYGTLLVESLLRVRAREDPDEWARAMLPWVICRKT
                     VRERPEFVQLLLQRSLDNPYPTSYAGLRRQAEAIGAHDTLSRLPAIRVPTLVTLGAED
                     ILVPPAFSREVHARIPDAELS"
     gene            complement(730..1734)
                     /locus_tag="VF061_06615"
     CDS             complement(730..1734)
                     /locus_tag="VF061_06615"
                     /EC_number="4.1.3.3"
                     /EC_number="4.2.1.41"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: protein motif:HMM:NF012904.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009436 - glyoxylate catabolic process
                     [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HEX6669212.1"
                     /translation="MPLPHPLRHPGAVLLGERAGAEADLARPLGGLPGPRLIDWSGVF
                     HIMATPFTDGGALDREGLPGLVERALETGIAGFTVLGIAGEAHRLTDDERRQVVETVV
                     KEVRGRVPVAVGASASGTHLAAALARMAQESGAQALMLAAPTGSRNLDAVLAHFHAVA
                     AATPLPIVLQDEPVTTQVVMPAAFIGRLVGESPRIEAVKLEEAPTLPKITRLRALFER
                     RVSIFGGLGGCYFFEELSRGADGAMTGFPYPEALRAIRDEFVGGRRGTARALFYRWLP
                     LIRFESQPGSTPGTSVGIRKEILRRRGWIRSAFVRPPAPALDAETLEELTEILTAVAG
                     "
     gene            complement(1623..>2045)
                     /locus_tag="VF061_06620"
     CDS             complement(1623..>2045)
                     /locus_tag="VF061_06620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX6669213.1"
                     /translation="VSALDVSIQAQVINLLEDLQKQFNLTYLFIAHDLSVVEHISTRV
                     AVMYLGKIVEIAPAKELYTNPKHPYTEALLSAVPIPDPAVKRKRILLEGDVPSPIKPP
                     SGCRFHTRCGIRVPSCSENEQVLKQISPGHWVACQVRA"
BASE COUNT          312 a          688 c          769 g          276 t
ORIGIN      
        1 cggacagctc ggcgtccggg atgcgcgcgt ggacctcgcg cgagaaggcg ggcgggacca
       61 ggatgtcctc cgcgccgagc gtcaccaggg tgggcactcg gatcgcgggg agacgcgaga
      121 gcgtgtcatg cgcgccgatg gcctccgcct ggcgccggag gcccgcatag ctggtgggat
      181 aggggttgtc cagcgagcgc tgcagcagaa gctggacgaa ctcgggtcgc tcgcggacgg
      241 ttttccggca gatgacccag gggagcatgg cgcgcgccca ttcgtcgggg tcctcgcgcg
      301 cgcgcacccg gagcaggctc tctacgagga gggttccgta ggcgtcgatg cgccccaggg
      361 tgcagtggag ctggagcgag cggacccgcg ccggatgtcg gagcgccagc tcctgcgcga
      421 tcatgccgcc catggaggcg ccgcagatgt gcgcgcgggc caggccgagc gcttccatca
      481 ggcccaccac gtcttccgcc attccgggaa tcgagtacgg ggcgtccggc tgatcgcttt
      541 gccccgcgcc ccggttgtcg agcgcgatca cgcggtgggt cgcggcgagg gcctgcacct
      601 ggaaggccca ggcggtgtga tcgccgcccc agcccatgat gaggaccacc gggtcgccgg
      661 acggagcccc caggtcctga tagaagagcc cgatgccgtt gacgttgacg cggggcatcg
      721 gagtgccgcc tagccggcga cggcggtgag gatctccgtg agctcctcca gcgtctccgc
      781 gtccagcgcg ggcgcgggcg gccgcacgaa agcggagcgg atccacccac gccggcggag
      841 gatttccttg cggatgccca ccgaagtgcc cggcgtcgag ccgggctggc tctcgaagcg
      901 gatcagcggc agccaccggt agaagagcgc gcgggcagtc ccccgccgcc cccccacgaa
      961 ctcgtcgcgg atcgcgcgca gggcctcggg gtacgggaag ccggtcatgg cgccgtcggc
     1021 cccacgggag agctcctcga aaaagtagca gcccccgagc ccgccgaaga tggacacccg
     1081 gcgctcgaag agggcgcgca ggcgcgtgat cttgggcagg gtgggcgcct cctcgagctt
     1141 caccgcctcg atgcggggac tctcgccgac gaggcgcccg atgaaggccg ccggcatcac
     1201 cacctgggtg gtcaccggct catcctgcaa gacgatgggc agcggcgtcg cggccgcgac
     1261 cgcgtggaaa tgggcgagca ccgcgtcgag attccgcgag ccggtgggcg cggccagcat
     1321 gagggcctgg gcgccggact cctgcgccat gcgcgccagc gccgccgcga ggtgggtgcc
     1381 ggaggccgag gcgcccaccg cgaccggaac gcgcccgcgg acttccttga ccacggtctc
     1441 caccacctgg cggcgctcgt cgtcggtgag gcgatgcgcc tcgccggcga tgcccagcac
     1501 ggtgaagccg gcgatgccgg tctcgagcgc ccgctccacc agccccggca gcccctcacg
     1561 gtccagcgcg ccgccgtccg tgaacggcgt cgccatgatg tgaaagacgc cggaccagtc
     1621 gatcaggcgc ggacctggca ggccacccag tggccgggcg agatctgctt cagcacctgc
     1681 tcgttctccg agcaggacgg cacccggatg ccgcagcggg tgtggaagcg gcagccggag
     1741 ggcggcttga tgggactggg cacgtcgccc tccagcagga tgcgcttgcg cttgaccgcc
     1801 ggatcgggga tcggcaccgc ggagaggagc gcctcggtgt aggggtgctt gggattggtg
     1861 tagagctcct tggcgggagc gatctccacg atcttgccga ggtacatcac ggccaccctc
     1921 gtcgagatgt gctcgaccac cgagaggtcg tgggcgatga agaggtaggt gaggttgaac
     1981 tgcttctgga gatcctccag gaggttgatc acctgggcct ggatggacac gtccagggcg
     2041 gagac
//
LOCUS       DASUYN010000338         2291 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_331579, whole genome shotgun sequence.
ACCESSION   DASUYN010000338 DASUYN010000000
VERSION     DASUYN010000338.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2291)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2291)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2291
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_331579"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..914)
                     /locus_tag="VF061_06625"
     CDS             complement(<1..914)
                     /locus_tag="VF061_06625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proton-conducting transporter membrane subunit"
                     /protein_id="HEX6669214.1"
                     /translation="MIASHWIWLAVALPLAGFLVNGTLALRRRPAVRAVSLVGPGVLL
                     GAFAVSAGVALGLLADPPHEPHVVRLWSWMPVGALQIDLAFQVDQLAVVMLLVVTGVG
                     SLIHLFSVGYMREDPGYARYFAYLNLFVVFMLVLVLGSSLPVLFIGWEGVGLCSYLLI
                     GFWFTDKANADAGKKAFIMNRIGDFGVLVAMFLLWRELGTLEFVRIAELAPTELVAGG
                     TMVTLITLFLFLGCTGKSAQIPLYTWLPDAMAGPTPVSALIHAATMVTAGVYMVARSS
                     VLFALAPTGSLLVAGIGALTALFAATIAL"
     gene            complement(914..1228)
                     /gene="nuoK"
                     /locus_tag="VF061_06630"
     CDS             complement(914..1228)
                     /gene="nuoK"
                     /locus_tag="VF061_06630"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HEX6669215.1"
                     /translation="METGMAPLLGPALGLSAILFSLGVAGVLLRRNVIVLFVCIELML
                     NAVNLTFVALAQLHGAGGQVMVFFVMTVAAAEAAVGLAIILAIFRHKQTVDLQNINLL
                     RG"
     gene            complement(1228..1785)
                     /locus_tag="VF061_06635"
     CDS             complement(1228..1785)
                     /locus_tag="VF061_06635"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF012709.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HEX6669216.1"
                     /translation="MTEAVFWIFAVVAVTTASLCVLSRSALAAVLWLTTTMLSLAAIY
                     VLLSAEFVAAIQVLVYAGAVMVLFLFVVMLLNLGHPTSDMRGPAAVATTVVIGGLLAI
                     QLFALWSYSPDRLAAEVAQAPQLSDPATLFAGGPAARQAAVEQGVVGAVAAPLFQTYL
                     VPFELTSILLLVAIVGAVVLAKRRI"
     gene            complement(1786..>2291)
                     /locus_tag="VF061_06640"
     CDS             complement(1786..>2291)
                     /locus_tag="VF061_06640"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit I"
                     /protein_id="HEX6669217.1"
                     /translation="MKRPERQVSYVRATLKGMALTFKHMFEKKVTMQYPEQKSTDREH
                     GLGTYSLSPRWRGTHRMLTDEQGRSKCVACGLCPQICPANCIKLVPGEDEQGHRYPLI
                     YEIDEFRCIFCGYCQEVCPEEAIHVGTHFENSEYSRGRFVYDLERLSAQTHAVSTLWD
                     PADPKGE"
BASE COUNT          436 a          759 c          804 g          292 t
ORIGIN      
        1 agcgcgatgg tcgccgcgaa cagcgcggtc agcgcgccga tgccggccac cagcaggctc
       61 cccgtcggcg ccagggcgaa cagcaccgag ctgcgcgcga ccatgtagac gcccgccgtc
      121 accatggtgg cggcgtggat cagggcggac acgggcgtcg gaccggccat ggcgtcgggg
      181 agccaggtgt agagcgggat ctgggccgat ttcccggtgc agccgaggaa gaggaacagc
      241 gtgatcaggg tgaccatcgt cccgcccgcg accagctccg tcggcgcgag ctcggcgatc
      301 cggacgaact ccagggtgcc cagctcccgc cagagcagga acatcgccac cagcacgccg
      361 aagtcgccga tccggttcat gatgaaggcc ttcttgccgg cgtcggcatt ggccttgtcg
      421 gtgaaccaga agccgatgag gaggtaggaa cagagtccca caccctccca gccgatgaac
      481 aggaccggca gactggagcc gaggaccagc accagcatga acacgacgaa gaggttgagg
      541 tacgcgaagt agcgcgcgta gcccgggtcc tcccgcatgt agcccacgct gaagaggtgg
      601 atgaggcttc ccacccccgt gaccaccagg agcatgacga ccgccagctg gtccacctga
      661 aaggcgaggt cgatctggag cgcgcccacc ggcatccagg accagagcct gaccacgtgg
      721 ggctcgtgcg gcggatcggc gagcaggcca agcgcgacac cggcggagac ggcgaaggcg
      781 cccagcagca cgcccgggcc cacgagcgag acggcacgaa ccgccggccg ccgacgcagg
      841 gccagggtcc cgttgaccag gaacccggcg agcgggagcg ccacggcgag ccagatccag
      901 tgggatgcga tcatcagccc cgcagcaggt tgatgttctg gaggtccacg gtctgcttgt
      961 gtcggaagat ggcgaggatg atggcgagcc ccaccgccgc ctcggcggcg gcgacggtca
     1021 tcacgaagaa caccatcacc tggccgccgg ccccgtgcag ctgggccagg gcgacgaagg
     1081 tgaggttgac ggcgttcagc atcagctcga tgcagacgaa gagcacgatg acgttgcgcc
     1141 ggagcagcac gccggcgacg ccaaggctga acaggatggc cgaaaggccg agggcgggcc
     1201 ccaggagcgg ggccatgccg gtctccatca gattctccgc ttggccagca ccacggcgcc
     1261 cacgatggcg acgaggagca ggatggaggt gagctcgaac ggcaccaggt aggtctggaa
     1321 gagcggcgcg gcgaccgcgc ccaccactcc ctgctccacc gccgcctggc gggccgccgg
     1381 acccccggcg aacagggtgg ccggatcgct gagctgggga gcctgggcca cctcggcggc
     1441 gagccgatcg ggcgaatagc tccagagggc gaagagctgg atcgccagga ggcccccgat
     1501 caccaccgtg gtggcgaccg cggcgggtcc ccgcatgtcg ctggtgggat ggccgagatt
     1561 gagcagcatg accacgaaga gaaacagcac catcaccgcc ccggcgtaca ccaggacctg
     1621 gatcgcggcc acgaactccg cgctcaggag cacatagatc gccgccaggg agagcatggt
     1681 ggtggtgagc cagagcaccg ccgcgagcgc gctccgggag agcacgcaca gcgaggcggt
     1741 cgttacggcg acgaccgcga agatccagaa gaccgcctcg gtcatctact cccccttcgg
     1801 atcggcgggg tcccagagcg tcgagacggc gtgggtctgg gccgacagcc gctcgaggtc
     1861 gtacacgaag cgcccccggg aatactccga gttctcgaag tgggtcccga cgtggatcgc
     1921 ctcctccggg cagacctcct ggcagtagcc gcagaagatg cagcggaact cgtcgatctc
     1981 gtagatcagc gggtaccgat gcccctgctc gtcctcaccc ggtaccagct tgatgcagtt
     2041 ggcgggacag atctggggac acaggccgca ggccacgcac ttggagcggc cctgctcatc
     2101 ggtgagcatc cgatgggtgc cgcgccagcg gggggacagg gaataggtgc ccagtccgtg
     2161 ctcccggtcg gtgctcttct gctccgggta ctgcatcgtc accttcttct cgaacatgtg
     2221 cttgaaggtg agcgccatcc ccttgagcgt ggcccgcacg tagctcacct gtcgctcggg
     2281 ccgcttcatg a
//
LOCUS       DASUYN010000339         3783 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_770183, whole genome shotgun sequence.
ACCESSION   DASUYN010000339 DASUYN010000000
VERSION     DASUYN010000339.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3783)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3783)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3783
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_770183"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(51..215)
                     /locus_tag="VF061_06645"
     CDS             complement(51..215)
                     /locus_tag="VF061_06645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669218.1"
                     /translation="MSTSPLATATPLGIVIKNGGPSPKPVRFWAYLWAADEEASVDHW
                     HLRVPSEHAA"
     gene            complement(352..1233)
                     /locus_tag="VF061_06650"
     CDS             complement(352..1233)
                     /locus_tag="VF061_06650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669219.1"
                     /translation="MLSATEIRGTQRRRRSPYSEKQYYQEYILQRIEGFKNSIGREEL
                     MRLGDEAASELQATTEGQFVLTEVLMLETVDRLIMKRLALRPYRRWREQFRKLREAQR
                     TPVHWGLDGGCALARLLPRIEAHDVALVVGAGAEPATYLLAAHDAEVTFIAADVGCVE
                     RVESRMAAEALAGLFDGYVAPVGPCLPCFLDTLEQVDIVVVDPNTLAGCKPQTRAGLL
                     ADLQRRSRPGGVHVVLGGSRALSPDAIRGLYDGWSAEEEPLRRKRPTQPRRPEGLLLV
                     KPTCPPDAGAEPMAASI"
     gene            complement(1399..2553)
                     /locus_tag="VF061_06655"
     CDS             complement(1399..2553)
                     /locus_tag="VF061_06655"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF022137.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent rRNA methyltransferase"
                     /protein_id="HEX6669220.1"
                     /translation="MTAARVTARGAERWVRGHPWIYRSDVERHPPDAGLVRVEDPRGR
                     FIGQGLLSPASEIRLRLLERTEREVDAAWWRERLERAAARRAGIDATAWRVVHGEGDG
                     LPALVVDRYDRWIVAQILSAGLETMRRHILDGIVALFAPEGILLRHDVPARRRERLPD
                     AIEQVHGSVPRQVEVREGRVRYLAAPWEGQKTGAFLDQRPNRILAGEVTPAGGRALDC
                     FAYHGSFSLHLAGRAGMVIALDSSPGALERARANAALNGLHNIEWREVDAFEGLRAMA
                     RAREQFDTIVLDPPAFAKTRASVPDALRGYREVNLRAMRCLAPGGTLLTASCSFHVRL
                     PDFLAMLGQAAADSGRRIRMRRVLGAGEDHPEILTVPETGYLKGALLEAD"
     gene            complement(2550..2924)
                     /gene="aroH"
                     /locus_tag="VF061_06660"
     CDS             complement(2550..2924)
                     /gene="aroH"
                     /locus_tag="VF061_06660"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: protein motif:HMM:NF019356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004106 - chorismate mutase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HEX6669221.1"
                     /translation="MTLPAPRMQGIRGATTVERNDAGEILEATDELLRALIEANELEP
                     DDIVSALFTVTRDLDAAFPARAAEEYGWNIVALLHATEIPVPGSLPGCIRLLVHAYTR
                     RTRGEIKHCYLRGATVLRPDRA"
     gene            2956..3543
                     /gene="thiE"
                     /locus_tag="VF061_06665"
     CDS             2956..3543
                     /gene="thiE"
                     /locus_tag="VF061_06665"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004789 - thiamine-phosphate
                     diphosphorylase activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HEX6669222.1"
                     /translation="MLVTDDRLAAGRDLVALARAAERGGVTSVQLRLKQAPPREQTAL
                     ARALVAALRIPVLVNDRPDVAVAAGAAGVHLGPDDLPVALARRVVPPGNMLGASAGSP
                     AEAAAAAGADYWGVGPWRTTDTKADAGDALGPEGFGRIVRLGNGKPCIAIGGVRPDDV
                     PAVLAAGGAGVGVVSGILGADDVEAAARRYARALG"
     gene            complement(3558..>3783)
                     /locus_tag="VF061_06670"
     CDS             complement(3558..>3783)
                     /locus_tag="VF061_06670"
                     /inference="COORDINATES: protein motif:HMM:NF014656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HEX6669223.1"
                     /translation="FTRDYQFPSRYNTYLHPGLPPGPVNSPSIRSLEASLHPAKVPYL
                     YFVAGPDGRHVFSRTYDEHLRAIARVRRGR"
BASE COUNT          538 a         1280 c         1446 g          519 t
ORIGIN      
        1 cgcccccgga aaaggtgtcc gggggcgtgg agtgcagagg gggcgccggg tcaggccgcg
       61 tgctcgctcg gcacccgcag gtgccaatgg tccaccgagg cctcctcgtc ggcggcccag
      121 aggtaggccc agaagcggac cggcttgggg gacggcccgc cgttcttgat gacgatgccg
      181 agcggggtgg cggtagcgag aggtgaagtg ctcacggaac ggtcctcact ggacgaggga
      241 gccacgacta tccgcgcgag tgctgaggca cgcctcgtgc ccctggggtg ctgccgtcca
      301 agtcgttgaa atgaagctac ttcggaaggt atccgcgagc gtgggcgagt gtcagatgga
      361 cgcggccatc ggctccgccc ccgcgtccgg gggacacgtg ggcttcacca gcagcagccc
      421 ctcgggacgg cgcggctggg tcgggcgctt gcgtcgcagc ggctcctcct cggcgctcca
      481 gccgtcgtag aggccgcgga tcgcgtccgg tgagagggct cggctccctc cgaggaccac
      541 gtggaccccg ccgggccgac tgcgccgctg cagatcggcc agaagaccgg cacgcgtctg
      601 cggcttgcag cccgcgaggg tgttcggatc caccaccacg atgtccacct gctcgagggt
      661 gtcgagaaag caggggagac agggccccac cggggcgaca tacccgtcga acaggccggc
      721 aagtgcctcg gccgccatcc gcgactcgac ccgctccacg cagccgacgt cggcggcgat
      781 gaaggtgacc tccgcgtcgt gggcagccag gagataggtc gcgggttcgg ccccggcgcc
      841 caccaccagt gccacgtcgt gggcctcgat ccgcgggagc agccgagcga gcgcacagcc
      901 cccgtcgagg ccccagtgga ccggcgtgcg ctgggcctcg cgcagcttgc ggaactgctc
      961 ccgccaccgg cggtacggcc gcagcgccag gcgcttcatg atgagccggt ccaccgtctc
     1021 cagcatcagc acttcggtca ggacgaactg gccttccgtc gtcgcctgga gctccgacgc
     1081 cgcctcgtcg ccgagccgca tgagctcctc ccggccgatc gagttcttga aaccctcgat
     1141 gcgctggagg atgtactcct ggtagtactg cttctcggaa taaggggaac gccgccggcg
     1201 ctgagtgccg cgaatctcgg tggcgctcag catgcaaccc tgttcggcga gaggtcgcgc
     1261 tgaggcgcac gaccgatcac gagtatcact gcgggctttt ggggaatggg ctcggaacga
     1321 acgatggtcc cacgaagacc accgtcatag acgatggtgc aaattcgtac atcaccctat
     1381 ccaggtcaag cggggaactc aatccgcttc cagcagagcc cccttcaggt agccggtctc
     1441 cggcaccgtg agaatctcgg ggtggtcctc gccggcgccc aggacgcggc gcatgcggat
     1501 gcgccgccca ctgtcagcgg ccgcctgccc cagcatggcg aggaagtcgg ggagccggac
     1561 gtggaacgag caggacgcgg tcagcagcgt cccgcccggg gcgaggcagc gcatggcgcg
     1621 gaggttgact tcgcggtagc cgcgcagcgc gtccggcacg gaggcacggg tcttggcgaa
     1681 ggcgggcggg tccagcacga tggtgtcgaa ctgctcgcgc gcccgggcca tggcgcggag
     1741 gccctcgaag gcgtccacct cgcgccattc gatgttgtgg agcccgttca gcgccgcgtt
     1801 ggcacgggcc cgttccagcg cgccggggct ggagtcgagt gcgatcacca tccctgcgcg
     1861 gccggccagg tggagcgaga aggagccgtg gtaggcgaag cagtccagcg cgcgcccgcc
     1921 ggcgggtgtc acctcgcccg cgaggatgcg gttgggccgc tgatcgagga aggcgccggt
     1981 cttctgtccc tcccagggcg cggcgagata gcggacccgg ccctcgcgca cctcgacctg
     2041 ccgggggacc gagccgtgga cctgctcgat ggcgtcgggg agacgctcgc gtcggcgggc
     2101 gggcacgtcg tggcgcagga ggatgccctc cggcgcgaac agggcgacga tgccgtccag
     2161 gatgtgccgg cgcatggtct cgagacccgc ggacaggatc tgcgcgacga tccagcggtc
     2221 gtagcggtcc accacgagcg ccgggaggcc gtcgccctcg ccgtggacca cgcgccaggc
     2281 cgtcgcgtcg atgccggcgc ggcgggcggc cgcgcgctcg agtcgctccc gccaccaggc
     2341 cgcatccacc tcgcgctcgg tccgctccag caggcggagg cggatctccg acgcgggcga
     2401 gaggagcccc tggccgatga atcggccgcg gggatcctcc acccgcacca gcccggcgtc
     2461 cggcggatgc cgctcgacgt cgctgcgata gatccaggga tgcccacgca cccatcgctc
     2521 ggcgccgcgc gccgtgaccc gcgcggccgt catgcgcggt cgggacggag gaccgtggct
     2581 ccccggagat agcagtgctt gatttcgccg cgcgtgcgac gggtataggc gtgcaccagc
     2641 agccggatgc agccgggcaa ggagccgggc accgggatct cggtggcgtg gagcagggcc
     2701 acgatgttcc agccatactc ttcggcggcc cgcgccggga aggccgcgtc gaggtcgcgg
     2761 gtgacggtga acagcgcgct cacgatgtcg tccggctcga gctcgttggc ttcgatgagg
     2821 gcgcgcagca gctcgtccgt cgcctccagg atctcgccgg cgtcgttccg ctcgaccgtg
     2881 gtggcgccgc gaataccctg catccggggg gcgggaagcg tcatggctga taatgtagcg
     2941 gcagtggttc ggctgatgct cgtcaccgac gaccggctcg cggccgggcg cgatctcgtc
     3001 gcgctcgccc gcgcggcgga gcgcggtggc gtcacctcgg tgcagctccg gctcaagcag
     3061 gcgccgccgc gggagcagac ggcgctcgcg cgggcgctgg tcgcggcgct gcgcatcccc
     3121 gtgctggtga acgatcggcc cgatgtggcg gtcgccgccg gtgccgccgg cgtgcacctc
     3181 ggcccggacg acctgccggt cgcgctggcc cgccgggtgg tgccccccgg gaacatgctc
     3241 ggtgcgtccg ccggctcgcc ggccgaggcg gccgcagcgg caggggcgga ctactggggc
     3301 gtgggcccct ggcgcacgac ggacaccaag gcggacgcgg gcgatgcgct gggccccgag
     3361 ggctttgggc ggatcgtgcg gctcggcaac gggaagccat gcatcgcgat cggcggggtg
     3421 cggccggatg acgtgcctgc ggtgctcgcg gcgggtgggg caggggtggg ggtggtgtcg
     3481 gggatcctgg gggcggacga cgtggaggcg gcggcgcgga ggtatgcccg ggcgctcggg
     3541 tgagggcacg gtcgccccta ccggccacgc ctcacccgcg caatcgcccg caggtgctcg
     3601 tcgtaggtcc gggagaacac gtgccgcccg tccgggccgg cgacgaaata gaggtagggc
     3661 accttggcgg gatggagcga ggcctcgagg ctgcggatgc tgggcgagtt gaccggtccc
     3721 ggcggcagac cggggtgcag gtaggtgttg tagcgcgaag gaaactggta gtcccgcgtg
     3781 aac
//
LOCUS       DASUYN010000340         3134 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1653726, whole genome shotgun sequence.
ACCESSION   DASUYN010000340 DASUYN010000000
VERSION     DASUYN010000340.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3134)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3134)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3134
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1653726"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(161..1579)
                     /locus_tag="VF061_06675"
     CDS             complement(161..1579)
                     /locus_tag="VF061_06675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669224.1"
                     /translation="MSRLLLLAAVGTVAVLVSVAGAWADHATRPHSANMKALGHSPHP
                     ATFNGTVSALRNVNSDLAFWGDLVFHGNYDGFRIIRASASDPQELNWTHCNGDQGDIV
                     VWGNILVRAWNSAAPADNPATPIQENRFCDGQPVPVGFEGMHIFDISDISNPQLVGEV
                     ELSARPEADMPGCGSHTLTLAPDLDNNRVLIYNATSGGNPALPDDIEDCDWVDIIQVP
                     LNNPGAASHLHREPLEGGHAAHDNGVILGDVNKLAVASGHMSNVFDISNPANPELLYT
                     IEEPGVCNTGGPLCNGNWHSGGFTWDGEVVVMGWEPGGGAAPECESTDPAVKKSAFFY
                     DADTGKKLGQWTLPRPQDGTPPENCTIHNYNVVPKRSGQYALTVGNYQAGTWVVDFSK
                     PAQPKTVAWSDPPPLPQVTSPTTGLPVNELGGAWSSYFYNGNIWESEITKGLNVFRNG
                     WAAASSIRLSHLNPQTQEFSLP"
     gene            complement(1753..2937)
                     /locus_tag="VF061_06680"
     CDS             complement(1753..2937)
                     /locus_tag="VF061_06680"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX6669225.1"
                     /translation="MVLAVGAGATAALSAVQGGLPALGPAIQQAFGLSLVEVAAAFTA
                     FALGTVITLLAWGGLSDRAGERWVIAAGLGAGSLALAAAASVDGYAAFLGALVVAGML
                     GSSAISASGRAVFGWFPRDERGLALGLRQTAVPAGAAAASLSLPPLAAAAGLDAALYA
                     LAGAMLAASLAAALWLRGGERFESAAPPAPDAVRDPRIWRLSVASSLMIIGQVGLTSL
                     LVLYLYGERGWSPADAALALGGVQVGAALARVAAGRWSDLRDERIEPFRRLAAAAGTL
                     LLAAAALAGAPDAIAVPVLMAGGVAAMSWNGLSFTAAAEISGRRQAGTAMGIQNTSMR
                     LVAVGVPVGMGALASAVSWQLAFLLMGAAPLAARQLLAPLVADEHDRREARRARQAEA
                     RA"
BASE COUNT          499 a         1110 c         1054 g          471 t
ORIGIN      
        1 caagagcgaa tggtggtggt tcgccgcggc gccgcccggg actgcgagcg ccccggccaa
       61 gcagcccaac gcagtaagca cggtacgttt cttcatttcg cctcctttct acgcaggtgg
      121 cagggaggac gagcacgcag cccgtcctcc ctgatgtcac ctatggcagc gagaactcct
      181 gcgtctgcgg gttgaggtgc gacagcctga tcgagcttgc cgccgcccaa ccgttccgga
      241 acacgttcag gcccttggtg atctccgact cccagatgtt gccgttgtag aagtaggagg
      301 accacgctcc gccgagctca ttcacgggca ggcccgtggt cgggctggtc acctgcggaa
      361 gcggaggcgg atcggaccat gcaaccgtct tcggctgcgc cggcttgctg aagtcgacaa
      421 cccaggttcc ggcctggtag ttgccgaccg tgagcgcgta ctggccactc cgcttcggca
      481 ccacgttgta gttgtggatt gtgcagttct ccggcggcgt accgtcctgc ggccgcggga
      541 gcgtccactg gcccagcttc ttgccggtat ccgcgtcgta gaagaaggcg gacttcttta
      601 cggccgggtc cgtcgactcg cactcgggtg cggcgccgcc gccgggctcc cagcccatga
      661 ccacgacctc gccgtcccac gtgaacccgc ccgagtgcca gttgccgttg cacaacggtc
      721 cgccggtgtt gcagacgccg ggctcctcga tcgtgtagag gagctccgga ttggcggggt
      781 tcgagatgtc gaacacgttg ctcatgtgcc cggaggccac ggcgagcttg ttgacgtcac
      841 ccagaatcac gccgttgtcg tgcgccgcgt gcccgccttc gagcggctcg cggtgcaggt
      901 gcgatgctgc gcccggattg ttgagcggca cctggatgat gtcgacccaa tcgcagtcct
      961 cgatgtcgtc cgggagcgcc gggtttcctc ccgacgtcgc gttgtagatc aggaccctgt
     1021 tgttgtccag atcaggcgcc agcgttagcg tgtgcgagcc acatcccggc atgtcggcct
     1081 ctggccgagc gctcagctcc acctcgccga ccagctgcgg gttgctgatg tcgctgatgt
     1141 cgaagatgtg catcccttca aagcccaccg gtaccggctg cccgtcacag aagcggttct
     1201 cctggatcgg cgtcgctggg ttatccgccg gcgcggcgct gttccacgcg cgaacgagga
     1261 tgttgcccca gacgacgatg tctccctgat cgccattgca gtgcgtccag ttgagttcct
     1321 gagggtcgct cgccgacgct ctgatgattc ggaacccgtc gtagttgccg tggaagacga
     1381 gatcgcccca gaaggcgagg tcggagttga cgttgcgcag ggccgacacc gtgccattga
     1441 aggtggcggg atgtggactg tgccccagcg ccttcatgtt ggccgaatgc ggccgggtgg
     1501 catgatcggc ccaggcccca gccaccgata cgagcactgc gacggtgccc actgcggcaa
     1561 gaagcagcag gcgcgacatc ggtctcataa gaaacctccc ccaaggattc agtaaggagg
     1621 gaaggcgagc cgcagaggct cttcgatacg ggaaacgtcc atatttcccc cttccctcac
     1681 cgcacgaatg ccctacccgg aacatcaaaa agccactcgt cgcgtttgaa tcccgtgaag
     1741 tggccgtagg ggttaggccc gcgcctcggc ctgccgcgca cggcgagcct cgcgccgatc
     1801 gtgctcgtcc gccacgagcg gggctagcag ctggcgggcg gccagcggtg ccgcgcccat
     1861 cagcaggaac gcaagctgcc acgaaaccgc cgaggccagc gctcccatgc ccaccggtac
     1921 tcccaccgcg accaacctca tgctcgtgtt ctggatgccc atggccgtgc cagcctggcg
     1981 gcgccccgag atctccgcgg ccgccgtgaa ggagaggccg ttccagctca tggccgccac
     2041 gccgccggcc atcagcaccg gcaccgcgat cgcgtcgggc gcgcccgcca gagcggcggc
     2101 ggcgagcagc agcgtccccg cggcggcggc caggcggcgg aacggctcaa tccgctcgtc
     2161 gcgcaggtcg gaccagcgcc cggccgccac gcgcgccagg gcggcgccga cctgcacgcc
     2221 ccccagcgcc agcgcggcgt cggcggggga ccatccgcgc tcgccgtaga ggtagagcac
     2281 gagcagcgag gtcagtccca cctggccgat gatcatgagt gacgacgcca cgctgagccg
     2341 ccagatacgc gggtcgcgca cggcgtccgg tgccggcggg gcggccgatt cgaaacgctc
     2401 gccgccgcgc agccatagcg ccgcggccag cgacgccgcg agcatcgcac cggcaagcgc
     2461 atagagggcc gcgtcgagcc cagcggccgc agccagcggc gggagcgaca ggctcgcggc
     2521 ggcggcgccc gccgggaccg cggtctggcg cagcccgagg gcgaggccgc gctcgtcgcg
     2581 cgggaaccag ccgaatacgg cgcgcccgct tgccgagatc gcactcgacc cgagcatgcc
     2641 ggccacaact agggctccca ggaaggctgc gtagccgtcc accgaggcgg ccgccgccag
     2701 cgccagcgag ccggcgccaa ggccagcggc gatcacccag cgctcgccgg cacgatcgga
     2761 gaggccgccc cacgcgagca gcgtgatcac cgtgcctagc gcgaacgcgg taaaggctgc
     2821 cgccacctcg acgagggaga gcccaaacgc ctgctgtatc gccgggccga gcgcgggcag
     2881 cccgccctgc accgccgaga gcgccgcggt ggcgccggct cccaccgcca ggaccaccca
     2941 gcggtagccg ggcggttggc cgatgctgga gctcactccc tccgatacta cgtacgaggg
     3001 gcggccctga ggccgcccct cgcttacgac agatgaaccc gcttgattag tcctccatgg
     3061 tctgcgggtt caggtggtcc aggagcgtgc cggcgccggg cgccgtgatg tccgcccggt
     3121 agacctccat gccc
//
LOCUS       DASUYN010000341         4011 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_770408, whole genome shotgun sequence.
ACCESSION   DASUYN010000341 DASUYN010000000
VERSION     DASUYN010000341.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4011)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4011)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4011
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_770408"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..319
                     /locus_tag="VF061_06685"
     CDS             <1..319
                     /locus_tag="VF061_06685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669226.1"
                     /translation="SNVDLRILQDFAFGGVTRHNFQISLDFLNIGNLISSDWGVRKVA
                     SAAATSPLRLATDETGAPLANPFDANGAPILEFTGPAETFIDDPSVFSRWRAQLGLRY
                     FFE"
     gene            complement(414..1088)
                     /locus_tag="VF061_06690"
     CDS             complement(414..1088)
                     /locus_tag="VF061_06690"
                     /inference="COORDINATES: protein motif:HMM:NF024957.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porin family protein"
                     /protein_id="HEX6669227.1"
                     /translation="MSAYKWRAFWGYGVTLMAVVCPASGTVAAQDRAAVGAEVGYSRA
                     DLTGENSQLVKSRQGAITGLYLHVPVNRVMSVRPELLFSLRGGQARVGIADGDDFAEI
                     DVELAYLELPLLARFVLPRGRFRPVVFGGPSVALQIGCDFLFILAPDTSRSTCGERDT
                     TDVIDVSQVREWDFAWVAGGAMELHLPRTTLSLQGRYTGGLRSVLEGGVDLRNRTLAV
                     LFGLTF"
     gene            1267..2202
                     /locus_tag="VF061_06695"
     CDS             1267..2202
                     /locus_tag="VF061_06695"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX6669228.1"
                     /translation="MLTLERVSKRFDGIPAVDEVSFGVDRGQVVGFLGPNGAGKSTTM
                     RMITQYFEPDTGTIRLDGVPLTEGGREAKRRIGYLPENNPLYAEMLVSEWLDYVAGLR
                     GIRGADRRASLDESIAATGIEAVYHRPIGELSKGFRQRVGLAAAILHRPDLLVLDEPT
                     EGLDPNQRVEIRRLISQLGRERTVILSTHILPEVQFTCSRLLIINRGRIVADGPVEDL
                     VSRAKDGARIGVEAAGAGIADRLAELPGVRGVEARPIGGDRIRATVTVAGTEDLRPRV
                     FELAKASGWTLYELHQEAGSLEDLFRQLTTDQEPA"
     gene            2199..>4011
                     /locus_tag="VF061_06700"
     CDS             2199..>4011
                     /locus_tag="VF061_06700"
                     /inference="COORDINATES: protein motif:HMM:NF021351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gldg family protein"
                     /protein_id="HEX6669229.1"
                     /translation="MRRIWTVASRELRAMFDLPTGYVLLVVFLAINAFIFFRQAYLSN
                     TASLRPMLDMLAWEFLFFVPAVTMRSLAEDIRGGQIEVVLAQPLSELELLLGKYLGSV
                     LFLWIALALTFAIPLGLSAGADLPWGTIVGQYIGAALLAAGFAGIGVWASSLTRSQIT
                     AFIVAAGLMFLLILVGLDPLLVGLPPGLGAIAARIGVLSHFESLGRGVVDLRDVVYFV
                     SLSGVFLALAYAALLGRKLAPGAGARRLKLGVGMLVVSLVVVNLLGSYIGGRLDLTPG
                     NAYTLSPATGGIVRDLDDLVTVKVFASQELPTEVALMKRDVDDLLRDLRSAGRGQVRI
                     LERDPTDDEEARREAESLGIQPVQFNVIGQAELQVKQGYLGLAVQHGGETETIPFVQR
                     TDDLEYRLASTIRQLSRDKKPAVGFAVYSSGPSAAFAEMQEQLRRSYDVRDIDLSDST
                     QPGPDVVALVVAGTPDSLPQDQLRRLEAFLNRGGSLLVLSPGMEVSQQAPTAQPRQVA
                     WNALLRPYGVTIRSDMAYDLLANEVIPLPTDFGRVLQVYPFFIRAQSTRASAVNQDLG
                     AVVLTWASTIDTTGASRGTITPLLTSSPATGAFTALTS"
BASE COUNT          607 a         1439 c         1334 g          631 t
ORIGIN      
        1 cagcaatgtg gatctccgga tcctgcagga ctttgccttc ggcggagtga cccggcacaa
       61 cttccagatc agcctggatt tcctgaacat cgggaacctg atcagctccg actggggcgt
      121 gcgcaaggtg gccagcgcag ccgccacctc gccgctacga ttggcaacgg acgagaccgg
      181 cgcgccgttg gccaacccgt tcgacgccaa cggggctccg atcctcgagt tcaccggacc
      241 ggcggaaacc ttcatcgacg acccgagcgt gttctcccgc tggagggcgc agctggggct
      301 gcggtacttc ttcgagtgag gcgatagggg aaaagcgatg tcaccctgaa cgcggtgaag
      361 gggaccatgt cgacatggtc cccttcgctg cgctcagggt gacatcttct gctctagaac
      421 gtcagtccga aaagcacagc caacgtccgg tttctcaggt caacgccccc ttccagcacc
      481 gagcggagcc ccccagtgta gcggccttgg agcgacagcg tggtgcgggg caggtgcagc
      541 tccatcgccc cgccggcgac ccaggcgaag tcccattcgc gcacctggct gacgtcgatc
      601 acatcggtcg tgtcgcgttc gccacaggtg ctccggctcg tatcgggcgc caggatgaaa
      661 agaaagtcgc agccgatctg aagcgcgacc gacgggccgc cgaagacgac gggtctgaac
      721 ctgccccggg gaaggacgaa gcgagccagg agcgggagct ccaggtaagc cagttcgaca
      781 tcgatctcgg caaagtcgtc cccgtcggca atgccgaccc gggcctgtcc ccctcgtagg
      841 gagaagagca gctccggcct gacgctcatg acccggttca cgggcacgtg taggtacagc
      901 ccggtgatcg cgccctgccg actcttgacc aactgggagt tctcaccggt gagatcggcc
      961 cgagaatatc ccacctccgc acccacggcg gcgcggtcct gcgcggcgac ggttcccgac
     1021 gctggacaga ccacggccat cagggtcact ccgtagcccc agaacgctcg ccacttgtac
     1081 gcggacacga gagcgaatgt aatcgcccct ggccgccgga tgcgggccgc tccggccccg
     1141 cgacatctcc aggcctgcga cgcccgaggc cccccgtgca tcccgtccga gcggcgcttg
     1201 atggccgcgg gaccgcccat tatcatccgc ccgtttccat cacccaaacc aagctgcgat
     1261 atgtcgttgc tgactctgga acgtgtctcc aagcggttcg acgggattcc cgcggtggat
     1321 gaggtctcct tcggggtgga ccggggccag gtcgtgggct tcctgggccc caacggggcc
     1381 ggcaagtcca ccaccatgcg gatgatcacc cagtacttcg agcccgacac cgggaccatc
     1441 cggctcgacg gcgtccccct caccgagggt ggacgggagg ccaagcggcg gatcggctac
     1501 ctgcccgaga acaaccccct gtacgccgag atgctggtct cggagtggct ggactacgtc
     1561 gccgggctcc gagggatccg cggcgccgac cggcgggcct ccctggacga gtccatcgcc
     1621 gccaccggga tcgaggccgt ctaccaccgt cccatcggcg agctgtccaa gggctttcgc
     1681 cagcgggtcg gcctcgccgc cgcgatcctg catcgccccg accttctggt gctggacgag
     1741 cccaccgagg ggctcgaccc caaccagcgg gtcgagatcc ggcggctcat cagccagctg
     1801 ggtcgggagc ggaccgtcat cctctccacc cacatccttc ccgaggtgca gttcacctgc
     1861 tcccggctgc tcatcatcaa ccgcggccgg atcgtggccg acggcccggt cgaggacctg
     1921 gtctctcggg ccaaggacgg ggcccggatc ggggtcgagg cggcgggggc cgggatcgcc
     1981 gaccggctgg ccgaattgcc gggcgtgcgc ggggtggagg cgcggccgat cggaggcgac
     2041 cggatccgtg cgaccgtcac ggtcgccggc accgaggacc tgcgcccgcg ggttttcgag
     2101 ctggccaagg cgtcgggatg gaccctctac gagctgcacc aggaggcggg gagcctcgag
     2161 gatctcttcc gccagctgac caccgatcag gagccggcat gaggcgcatc tggaccgtcg
     2221 cgagccgcga gctgcgggcc atgttcgacc tgccgacggg ctacgtgctg ctcgtcgtct
     2281 tcctcgcgat caacgccttc atcttcttcc gccaggcgta cctgtcgaac accgcgagcc
     2341 tgcggccgat gctcgacatg ctggcctggg agttcctctt cttcgtcccc gcggtcacca
     2401 tgcggtcgct ggcggaggac atccggggcg gccagatcga ggtggtgctg gcccagccgc
     2461 tcagcgagct ggagctgctg ctggggaagt acctcggctc ggtgctgttc ctctggatcg
     2521 cgctggcgct gaccttcgcc atcccgctcg ggctctccgc cggggccgac ctgccctggg
     2581 gaaccatcgt cgggcagtac atcggtgccg cgctgctcgc cgccggattc gccggcatcg
     2641 gcgtctgggc ctcgagcctc acccggagcc agatcaccgc cttcatcgtg gccgccgggc
     2701 tcatgttcct gctgatcctg gtgggcctcg acccgctgct ggtcggtctg ccgccggggc
     2761 tgggcgcgat cgcggcgcgg atcggcgtgc tctcccactt cgagagcctg ggccgcggcg
     2821 tcgtggacct gcgagacgtc gtgtacttcg tgtcgctgtc cggggtcttc ctcgccctgg
     2881 cgtacgccgc cctgctgggc cggaagctcg cgccgggcgc cggcgcgcgc cggctcaagc
     2941 tcggcgtcgg catgctggtc gtctctctcg tcgtggtgaa cctgctcggc agctacatcg
     3001 gtgggcggct cgacctcacg ccggggaacg cctacaccct gtcgccggcg accggcggta
     3061 tcgtgcggga cctcgacgac ctggtcacgg tgaaggtgtt cgcctcgcag gagctgccga
     3121 ccgaggtggc gctcatgaag cgggacgtgg acgacctgct ccgcgacctg cgctccgcgg
     3181 gccgcggtca ggtccgcatc ctcgagcgcg accccaccga cgacgaggag gcccggcgcg
     3241 aggccgagtc gctcggcatc cagccggtgc agttcaacgt catcgggcag gcggagctcc
     3301 aggtgaagca gggctacctg ggtctcgcgg tccagcacgg cggggagacg gagaccatcc
     3361 ccttcgtcca gcggaccgac gacctggagt accggctggc ctccaccatc cgccagctca
     3421 gccgcgacaa gaaaccggcg gtcggcttcg ccgtgtactc ctcgggaccg tccgccgcct
     3481 tcgccgagat gcaggagcag ctgcgccgct cctacgacgt gcgcgacatc gacctgagcg
     3541 actcgaccca gccggggccc gacgtggtgg cgctggtcgt cgccggcacg cccgattccc
     3601 tgccccagga ccagctccgg aggctggagg cgttcctgaa ccggggcggc agcctgctgg
     3661 tgctctcgcc gggaatggag gtatcgcaac aggcaccgac ggcacagccc cgtcaggtag
     3721 cctggaacgc gctgctccgc ccctacgggg taaccattcg cagcgacatg gcctacgacc
     3781 tcctggccaa cgaggtcatc ccgctgccga ccgacttcgg ccgcgtgctc caggtgtacc
     3841 ccttcttcat ccgggcccag agcacccggg cgtcggcggt gaatcaggac ctgggcgccg
     3901 tggtgctcac ctgggccagc accatcgaca ccaccggcgc ctccaggggc accatcacgc
     3961 cgctgctcac ctcgagcccg gccaccggcg ccttcaccgc gctcaccagc a
//
LOCUS       DASUYN010000342         7905 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1214151, whole genome shotgun sequence.
ACCESSION   DASUYN010000342 DASUYN010000000
VERSION     DASUYN010000342.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7905)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7905)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7905
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1214151"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..651)
                     /locus_tag="VF061_06705"
     CDS             complement(<1..651)
                     /locus_tag="VF061_06705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669230.1"
                     /translation="MLVSLIGVRVGARPPTMGPLLLLALAGCAGDSLLLPDDRSPTQL
                     RAVSGNGQTGLVGAPVRHPLVVEAIDGSGRPVEGARIMFEFVDPPNGAEIAPPLSETD
                     ATGRAEVEVTLGAPAGDQPVEARLADPESALKVTFLLTAIRPNDGDGGDDDEGPPPDD
                     GPDDEEEGGGGGAGDEDDGDNGGGGDGDGDGNGGDGDDDGGNDKGGKGKDGGKDDKG"
     gene            complement(718..1497)
                     /locus_tag="VF061_06710"
     CDS             complement(718..1497)
                     /locus_tag="VF061_06710"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX6669231.1"
                     /translation="MSRGLAVVTGATAGIGREFAEQLGAKGYDLLLVARDHARLAQAA
                     AALGAAHGVEAKALPADLSRDDDVGRLADRLAASPRLALLVNNAGFGSRGRLAESDAA
                     RQEAMLRLHVLAPMRLARAALPVLLANRSGGIINVSSVAGFVYSAGNVNYCATKAYLT
                     TFSEGLAAELEGTGVRAQALCPGFTRTEFHARIPGPVERHPEFAWLSAREVVRYSLRC
                     LERGGPAVCIPGLRWRLAVGTIRLLPRGLIGWVTRRRYDRV"
     gene            complement(1494..2720)
                     /locus_tag="VF061_06715"
     CDS             complement(1494..2720)
                     /locus_tag="VF061_06715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX6669232.1"
                     /translation="MTTARRTHGFRESVIRGMTRLAREHDALNLAQGFPNFPAPELLK
                     EAAIRAIRADINQYAITWGAHRLRHALARTYAERYGLEADPDREITVTCGATEAMIAT
                     LLALVNPGEEVIVFEPFYENYGPDTILADAKPVYVPLEPGRPLDLDRLAGAFTPRTRA
                     IVVNTPSNPSGRVLTRAELEAIRDLCVAHDALAVTDEIYEHILYAGTHIPIATLPGMR
                     ERTITISGASKTFSVTGWRVGWIIAPAELTDAIRKVHDFLTVGAPAPLQEGVAEALEL
                     SDAEFYRDLAGSYRARRDLLQEALAEAGFRSVSPEGAYYILADFAPLAHVAAGNGPPP
                     DDTAFSVWLSREVGVTPVPGSSFFREGGGGRTLVRFVFCKTEDVLQEAARRLRSIGRG
                     GVARGAEAAARSGLQR"
     gene            2789..3607
                     /locus_tag="VF061_06720"
     CDS             2789..3607
                     /locus_tag="VF061_06720"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: protein motif:HMM:NF039343.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004725 - protein tyrosine phosphatase
                     activity [Evidence IEA];
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_process: GO:0045227 - capsule polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CpsB/CapC family capsule biosynthesis tyrosine
                     phosphatase"
                     /protein_id="HEX6669233.1"
                     /translation="MEPPLFTDLHSHLVPGVDDGSASLEESLHSLAALRAEGVVALVT
                     TPHLLLPRLATDADIARELGVQRSAFDELAEVVARRDDLPAVGLGQEIWAPDARQIRR
                     VVRRSDVGLGGGHYLLVEFGFDLRGTHEDVVREALDGGRGIVVAHPERYRYVAGTDPL
                     EQMRRWRELGALLQVNAGSFNGYYAASNPGAERLAWAMVEQGLVDLVSTDHHGTRRAG
                     VSLLEAFEALAGRGEGELAERVLARAPEQVARARLHGYGKPISSPPAAGSSRSP"
     gene            complement(3567..4805)
                     /locus_tag="VF061_06725"
     CDS             complement(3567..4805)
                     /locus_tag="VF061_06725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669234.1"
                     /translation="MYLVELRPGKEELYRTGDDLAAAIRSGEVDGHSRIYHRSTSKWI
                     SITLHPQYKAIVAQKPARPAENSDWLLAPQAETLEGAVQPPETLDAMPGDTDVAPAEG
                     DRGDNPWRRPMALGISGLFLLFGIQLAFSGPRPQWSTARADAAEIPAAEVEQATSQQV
                     VSLASTSTGWSEELAAVEAPVEEPAEPAPVEKARAVHPKAPRVAMKLEPAAPAASAAA
                     ANPKTVEALLADYGKAYTEARTRLGSGMRVARLHQLFAAPRLMPDGGITDTRLGLAGV
                     ANFIRVYREQEGSIERTYQDSFTTMSKDLGWSPKVAKRWYTREVGKEAPELASLTTRL
                     IAGIDSVLGVLSAEAGAYQLVDGKVHFEDGAAARQYGDLRRSINAAVDSARIAGGEES
                     AGPMGHLLKAIGTTQLPVES"
     gene            5229..5813
                     /locus_tag="VF061_06730"
     CDS             5229..5813
                     /locus_tag="VF061_06730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669235.1"
                     /translation="MTRKQRRFDDADFDFGERRGTAGGVGTIFLATALGVGIGLLAAP
                     DTGVRTRRRLRKRLETLGEDLGEGIEGVQGLSGRARERMRDRLAQVRKRGTDAWEDLE
                     DRWHGEEEEEGDSGALGAVLAIAAGVAATYFLTSDRAAPARSRVRETAQTVRREATNR
                     WERYQQQRQEGRSNGQPGETSPGAIPSDESPQAG"
     gene            5878..>7905
                     /locus_tag="VF061_06735"
     CDS             5878..>7905
                     /locus_tag="VF061_06735"
                     /inference="COORDINATES: protein motif:HMM:TIGR02074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PBP1A family penicillin-binding protein"
                     /protein_id="HEX6669236.1"
                     /translation="MNRRQRIFAAVVVALLLLSGVTTVWMATCGLAGCPSGQELRGFR
                     PSEGSRVLDRSGATLGRLSYVRRINVPLARVPRHVRAAFIAAEDRRFYYHGGVDWRSA
                     GRALVRNVAALEVREGFSTITMQVVRSAFLGHLGPDRTLRRKLIEIELARRVERALTK
                     QQILELYLNLIYLGSGTWGVEAASRDLFGKSVGALTVGEAALLAGLARGPSLYSPRRH
                     PESARGRRGVVLALMEREGYLRPAAAARATREPFRLAAAGWKPRRVRSQALDPVRAAV
                     DSLLGDDLGRAGDLVVHTTLDARAQAAAERAVSDRAAAIERGRPRPPEDRELQGALVA
                     LDPRNGEIRALVGGRRFVQRGFNRALGARRQPGSAFKPFVYAAAMAEGYTPATLVDDS
                     PVEVVDGSRVWRPVNFDGTYAGVVTLRRALTTSANAAAVRLSRAVGERRVVALARRAG
                     LRGRLQAVPSLALGAVEVTPLELTAAYAPFANGGHRVEPSLIRRIERADGTVLWRAPA
                     PQTERVLEEAEAFQVTSMLRSVVDEGTGHFVRELGVGGPVAGKTGTTNNGADIWFVGY
                     TPSVLATVWFGYDVPRPIARNASGGRLAAPAWAAFYRNGWKEPHTDSGWEAPAGLLSR
                     TIDAETGDLATEWCPNTRSEWFKPGTEPVRYCPHDPPVVEVLERVGREFGKA"
BASE COUNT         1042 a         2853 c         2898 g         1112 t
ORIGIN      
        1 gcccttgtcg tcctttcctc cgtccttccc cttgccgccc ttgtcgttgc caccgtcgtc
       61 gtccccgtcg ccgccattgc catccccatc gccatcaccg ccgccgccgt tgtcaccgtc
      121 gtcctcatcg ccggcacccc cgccgccgcc ttcctcctcg tcgtccggcc catcgtccgg
      181 gggcggaccc tcgtcgtcgt cgccgccatc gccgtcgttg ggccggatcg ccgtgagcag
      241 gaaggtgacc ttcagcgcgc tctcgggatc agccagccgg gcctctaccg gctggtcgcc
      301 ggccggcgcg ccgagggtga cctcgacctc ggcgcggccg gtcgcgtcgg tctccgacag
      361 cggtggcgct atctcggcgc cgttcggcgg gtccacgaac tcgaacatga tccgggcacc
      421 ttcgaccggg cgcccggacc cgtcgatcgc ctccaccacc agcgggtgcc gcacgggcgc
      481 gccgaccagg ccggtctgac cgttgccgga gaccgcgcga agctgggttg gggagcgatc
      541 gtcggggagc agaagactgt cgccggcgca gccggcgagc gcgaggagca gcagggggcc
      601 catggtggga ggccgggcgc cgactcgcac accgatgaga gagacgagca tacccgagtt
      661 ccttcggaag gaccgctcaa cttggggcgg gagcgggcgg gcccgatagg actcaggtca
      721 cacgcggtcg taccgccggc gggtgaccca cccgatgagg ccgcggggca gcaggcggat
      781 ggtcccaacc gccaggcgcc agcgaagccc cgggatgcac accgccggac caccgcgctc
      841 caggcagcgg agggagtatc tcaccacctc ccgggcgctc agccaggcga actcggggtg
      901 ccgctccacc ggccccggga tccgggcatg gaattccgtg cgggtgaagc ccgggcagag
      961 cgcctgcgcc cgcacccccg tcccctccag ctccgccgcc aacccctcgc tgaacgtggt
     1021 gaggtaagcc tttgtggcac aatagttcac attgccggcc gagtacacga agccggccac
     1081 cgaggagacg ttgatgatgc ccccgctgcg attggccagg agcaccggca gcgccgcgcg
     1141 agcgagccgc atgggtgcga gcacgtggag ccggagcatg gcctcctgcc gcgctgcgtc
     1201 ggactcggcc agccgcccgc gggatccgaa cccggcgttg ttgaccagga gcgccaggcg
     1261 gggcgaggcg gccagtcggt ccgccagccg gccgacgtcg tcgtcccggc tcagatccgc
     1321 ggggagggcc ttcgcctcca ccccgtgtgc cgccccaagt gcggcggcgg cctgagcgag
     1381 gcgagcgtgg tctcgggcca cgagtagcag gtcgtagccc ttcgccccca gctgctccgc
     1441 gaactcccgg ccgattcccg cggtcgcgcc ggtcacgacg gcgagcccgc ggctcaacgc
     1501 tggagcccgc tgcgcgccgc cgcttcggcc ccccgggcga cgccgccccg gccgatcgag
     1561 cggagccgac gcgccgcctc ctggagcacg tcctcggtct tgcagaacac gaaccgcacc
     1621 agcgtccgcc ctccgccacc ctcgcggaag aagctcgagc ccgggaccgg ggtcacgccg
     1681 acctcccgcg agagccagac cgagaacgcg gtgtcgtccg gcggcggccc attgcccgcg
     1741 gcgacgtgcg ccagcggcgc gaaatcggcg aggatgtagt aagccccctc gggagacacg
     1801 gagcggaatc ccgcttcggc cagcgcctcc tggagcaggt cgcggcgagc ccggtagctc
     1861 ccggccaggt cccggtagaa ctccgcatcc gacagctcca gcgcctcggc cacgccctcc
     1921 tgtagcgggg ccggcgcgcc gacggtgagg aagtcgtgca ccttccggat cgcgtcggtg
     1981 agctccgccg gcgcgatgat ccagcccacc cgccagcccg tgacgctgaa ggtcttcgac
     2041 gccccgctga tcgtgatggt gcgctcccgc atgccgggca gtgtggcgat gggaatgtgg
     2101 gtcccggcgt agaggatgtg ctcgtagatc tcgtcggtca ccgccagcgc gtcgtgcgcc
     2161 acgcagagat cgcggatcgc ctccagctcg gcacgggtca gcacccgacc cgacggattg
     2221 ctgggcgtgt tcaccacgat cgcccgggtg cgcggggtaa aggcgccggc gaggcggtcg
     2281 aggtcgagcg gacggccggg ctcgagcggc acgtacaccg gcttcgcgtc ggcgaggatc
     2341 gtgtcggggc cgtagttctc gtagaacggc tcgaagacga tcacctcctc gcccggattc
     2401 accagcgcga ggagtgtcgc gatcatcgcc tcggtcgcgc cgcaggtgac ggtgatctcc
     2461 cgatccggat ccgcttccag cccgtagcgc tccgcgtagg tgcgcgcgag cgcgtggcgg
     2521 aggcggtgag cgccccaggt gatggcgtac tggttgatat cggcccggat cgcgcggatc
     2581 gcggcctcct tgaggagctc gggcgctgga aaattgggaa agccctgggc gagattcagg
     2641 gcatcgtgct cccgcgcgag ccgggtcatg ccccggatca ccgactcgcg gaagccgtgg
     2701 gtgcgtcgcg ccgtggtcaa ctgggggctc ccgggggaga ggatggctga agactagcgt
     2761 ggctcgaagg ttgccgcatc ggggcccgat ggaaccgccc ctcttcaccg atctccacag
     2821 ccacctcgtg cccggggtgg acgatggctc cgcctcgctc gaggaatcgc tccactcgct
     2881 ggcggcgctt cgcgccgaag gcgtcgtcgc cctcgtcacc acgccccacc tgctgctccc
     2941 ccgtctcgcc accgatgccg acatcgcccg ggagctcggc gtgcagcgct ccgcgttcga
     3001 cgagctggcg gaggtggtgg cgcggcgcga cgacctcccg gcggtgggcc tgggccagga
     3061 gatctgggcg cccgacgcgc gccagatccg ccgggtcgtg cgccggtccg acgtggggtt
     3121 gggtgggggc cactacctgc tggtcgagtt cggtttcgat ctcaggggga cccacgagga
     3181 cgtcgtgcgc gaggcgctgg atggcggccg cggcatcgtg gtggcccatc ccgagcgcta
     3241 ccgctatgtg gcggggaccg atccgctgga gcagatgcgg cgctggcggg agctgggggc
     3301 actgctgcag gtgaacgcgg ggagcttcaa cggctactac gccgcgtcga atccgggggc
     3361 ggagcggctg gcgtgggcga tggtcgagca ggggctggtg gatctcgtct ccaccgacca
     3421 ccacggcacc cggcgcgcgg gcgtgtcgct cctggaagcg ttcgaggccc tggccggccg
     3481 cggcgaaggc gagctcgccg aacgggtgct ggccagggcc ccggagcagg tcgcgcgagc
     3541 gcgcctgcac gggtacggaa agccgatcag ctctccaccg gcagctgggt cgtcccgatc
     3601 gccttgagga gatggcccat cgggccggcc gattcctcgc ctcccgcgat gcgggcggag
     3661 tccaccgccg cgttgatgct gcggcgaagg tcgccgtatt gccgggcggc agccccatcc
     3721 tcgaagtgga ccttgccgtc gaccagctgg taggcacccg cctccgcgct caggactccg
     3781 agcacgctgt cgatccccgc gatcagccgg gtggtcaggg acgccagctc cggcgcctcc
     3841 ttgccgacct cccgggtgta ccagcgcttg gccaccttcg gcgaccagcc gaggtccttg
     3901 gacatcgtcg tgaacgagtc ctggtacgtc cgctcgatcg agccttcctg ctcccggtac
     3961 acgcggatga agttggcgac gccggcgagg cccagccgcg tgtcggtgat cccgccgtcg
     4021 ggcatcaggc gcggcgccgc gaagagctgg tgcaggcggg ctacccgcat gccggacccg
     4081 agccgggtgc gcgcctcggt gtacgccttc ccgtagtcgg cgaggagcgc ctcgaccgtc
     4141 ttgggattgg ccgcggccgc gctcgccgcg ggtgccgcgg gctcgagctt catcgccacc
     4201 cgcggggcct tcgggtgcac ggcgcgggcc ttctccaccg gtgccggttc ggccggctcc
     4261 tcgaccggtg cctcgaccgc ggccagctcc tcgctccacc cggtcgaggt gctcgcgagg
     4321 gagacgacct gctgcgaggt ggcctgctcg acctcggcgg ccgggatctc cgcggcatcg
     4381 gcgcgggccg tggaccactg cggccggggg cccgagaagg cgagctggat cccgaacagc
     4441 aggaacagac cgctgatgcc gagtgccatc ggccggcgcc acgggttgtc gccccgatcg
     4501 ccttcagccg gcgccacgtc ggtatcgccc ggcatcgcat cgagcgtctc cggcggctgg
     4561 acggcgcctt ccagcgtctc ggcctggggc gcgaggagcc agtcgctgtt ctcggccggg
     4621 cgcgccggct tctgggcgac gatggccttg tactgcggat gcagggtgat cgagatccac
     4681 ttggaggtgg accggtgata gatccgcgag tggccgtcca cctctccgct gcggatcgcg
     4741 gcggcgaggt cgtcacccgt tctatagagc tcttccttgc cgggtctcag ctccacgaga
     4801 tacatgacgc acactcgatc ggttcgagga tgccggccgg ttgccggcca tcctgggggg
     4861 tggaacacgt ggccaatggg gaagtgacgg attgcctccg tcctccgagt gccagatccg
     4921 tgctctgggc cgccccagct ccccgacccc ggcaggtggc ctcccccgag cccgcgggta
     4981 atgcgtgatc ggccaaccgc ttaccccgcg ggttcgggac ggcgtccggc cggcgggccg
     5041 ccccccgtcg gggcgcgggt ccgggtccgc cggcgcgcgg tcggggtgcg tttttcggga
     5101 ggacagggtg gaatgcaaga tgtttccttc ctgcccggga ctgattagtg tggggttgga
     5161 tccccgcctc gggcggaccg gggccagcac accgacacca tgagcctacc gcggctctcg
     5221 gggggtgcat gacgagaaaa cagcgcaggt tcgacgatgc cgacttcgat ttcggcgagc
     5281 gccggggcac ggccggcggc gtgggcacca tctttctggc gacggcgctc ggcgtgggca
     5341 ttggcctgct cgcggcgccg gataccggcg tgcgcacccg ccgccggctt cgcaagcggc
     5401 tggagactct gggcgaagac ctcggcgaag ggatcgaggg cgtgcagggc ttgagcggcc
     5461 gggcccggga gcggatgcgc gaccggctcg cccaggtgcg gaagcggggc accgacgcgt
     5521 gggaggatct cgaggaccgc tggcacggcg aggaggaaga ggaaggggat tcgggcgccc
     5581 tcggcgcggt gctcgccatc gcggccggcg tcgccgccac ctacttcctc accagcgacc
     5641 gggccgcccc cgccaggtcc cgggtccgcg agacggccca gacggtacgg cgtgaggcga
     5701 ccaaccggtg ggagcgctac cagcagcagc gccaggaggg acggagcaac gggcagccgg
     5761 gcgaaaccag cccgggagcg attccgtccg atgagtcccc tcaagccggt tgaggggacc
     5821 gccccaggat cgtccgcaca acggcccctg acggggccgt ttgtcattgg aggtgggatg
     5881 aatcgccgcc agcggatctt cgccgccgtg gtggtcgcgc tgctgctcct ctcgggcgtg
     5941 accaccgtct ggatggccac ctgtggcctc gccggctgcc cctcgggcca ggagctccgc
     6001 gggttccgtc ccagcgaagg cagccgggtg ctcgaccgct ccggcgccac cctggggcgg
     6061 ctctcctacg ttcgccggat caacgttcca ctcgccagag tgccgcgcca cgtacgcgcc
     6121 gccttcatcg cggcggagga ccgccgcttc tactaccacg gcggcgtgga ctggcgcagc
     6181 gcgggccggg cgctggtgcg gaacgtcgcc gcgctggagg tacgcgaggg tttcagcacc
     6241 atcaccatgc aagtggtgcg gagcgccttt ctcggccacc tcggccccga ccgcaccctc
     6301 cgccgcaagc tgatcgagat cgagctggcc cggcgggtgg agcgcgcgct gaccaagcag
     6361 cagatcctcg agctctacct caacctcatc tacctcggca gcgggacctg gggcgtggag
     6421 gccgccagcc gcgacctctt cggcaagagc gtgggcgcgc tcacggtggg cgaggcggca
     6481 ctgctggccg gcctcgcgcg cgggccctcg ctgtactcgc cgcgcaggca ccccgagtcg
     6541 gcgcggggcc gccggggcgt ggtgctcgcc ctcatggagc gcgagggcta cctgcggccc
     6601 gccgccgcgg cgcgggcgac ccgcgagccg ttccgcctcg cggccgccgg ctggaagccg
     6661 cgccgggtcc ggtcgcaggc cctcgacccg gtccgagcgg cagtggactc cctcctcggt
     6721 gacgacctgg gccgagccgg cgacctcgtc gtccacacca cgctggacgc ccgggcccag
     6781 gccgccgccg aacgcgcggt gagcgatcgc gcggccgcga tcgagcgggg tcggccgcgt
     6841 ccacccgaag accgcgagct ccagggcgcg ctggtggccc tcgacccgcg gaacggcgag
     6901 atccgcgcgc tcgtgggcgg ccgccgcttc gtgcagcgag ggttcaaccg tgcgctcggc
     6961 gcccggcgcc agccgggctc cgccttcaag ccgttcgtct acgcggcggc gatggcggag
     7021 ggctacaccc cggccaccct ggtggacgac tcccccgtcg aggtcgtgga cggctcgcgg
     7081 gtctggcgcc cggtgaactt cgacgggacc tacgccggcg tggtgacgct gcgccgggcg
     7141 ctcaccactt cggccaacgc ggccgccgtg cgactgagcc gcgcggtcgg cgagcggcgg
     7201 gtggtcgcgc tggcgcgccg cgccggtctc cggggccggc tccaggcggt gccctcgctg
     7261 gcgctgggcg cggtggaagt gacgccgctg gaactgaccg cggcctacgc gcccttcgcc
     7321 aacggggggc accgggtgga gccgtcgctc attcgccgga tcgagcgggc tgacggcacg
     7381 gtgctgtggc gagcgccggc gccccagacc gagcgcgtcc tggaggaggc ggaggccttc
     7441 caggtcacct cgatgctgcg ctcggtggtg gacgagggca ccggccactt cgtccgcgag
     7501 ctcggcgtcg gcggtccggt tgcgggtaag accggcacca ccaacaacgg cgccgacatc
     7561 tggttcgtgg gctacacccc gagcgtgctc gcgaccgtct ggttcggcta cgacgtcccc
     7621 cgccccatcg cgcgcaacgc ctcgggcggt cggctcgccg cgccggcgtg ggccgccttc
     7681 tatcgcaacg gctggaagga gccgcacacc gattccggat gggaggctcc ggccggcctg
     7741 ctcagccgca ccatcgacgc ggagaccggc gacctggcca ccgaatggtg ccccaatacc
     7801 cggagcgaat ggttcaagcc gggcaccgag ccggtccgct actgccccca cgacccgccg
     7861 gtggtcgagg tgctggagcg ggtgggacgg gagttcggga aggcg
//
LOCUS       DASUYN010000343         3045 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1874987, whole genome shotgun sequence.
ACCESSION   DASUYN010000343 DASUYN010000000
VERSION     DASUYN010000343.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3045
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1874987"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1613)
                     /locus_tag="VF061_06740"
     CDS             complement(<1..1613)
                     /locus_tag="VF061_06740"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX6669237.1"
                     /translation="MTAPSDQPLPTRLAQALGDAYTIEGEVGRGGMGVVYRARDERLQ
                     RRVAIKVLPPELAFQSDIRERFTREAQTAAKLSHPHIVPIHTVGEGFGLVYFVMGYVD
                     GESVASRIRRRGRLPVEETRRIMAESADALGAAHALSIIHRDIKPDNILLEGSRGRVM
                     VTDFGIAKALSGSSGATLTGAGVAIGTPAFMSPEQAAGEREIDGRSDLYSLGIVTFQM
                     LTGELPFNAPTVAGILMKQITEAAPDVRGRRPDVPEDLALAVSRCLEKDPENRWPTAD
                     SLRRALENRVVVGYQPTGLGWRASRAGTRPGARDPAPPAPRGSTASPRRTRPQGVLDR
                     GANDARLAGLDRDQRALARAGPRHPRRQPGGDAAIPDTGEPRIVQQVRGQFASWAAVS
                     LGCFGINVATGLDTPWFLFPTFGMGIGMLKNYAKLWQSGYSWRDVLTRPPAPDAVETM
                     MTKGAKLPRRMPQPTAEEFGAYLPQMLQVQSDRFAIAKLMEKLPASERKMLPEVQQTV
                     DALCDRATDLARTLHAMDSNLDTEGLGSI"
     gene            2021..>3045
                     /locus_tag="VF061_06745"
     CDS             2021..>3045
                     /locus_tag="VF061_06745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HEX6669238.1"
                     /translation="MPERLTLPVLPLREVVLFPGVTAPIGAGRPATLRAIESALSQSD
                     RLVFAVSQRQNVESVTPEVLYTIGTIARIGQLQRGLSGMQLLLHGERRGIAMHYTEKE
                     GFLQAIVREAEEMAPLNANDSAFVALHREARTRAAELGQKSGLPDEVVQQVLAGVNDP
                     GRFADLVAGYIDITPGDRQILLETLSVEERLRRVLVHVQRQIGVLDAQEDIKSQVQEE
                     LGERQREMFLREQLKTIQRELGEDDERDDLRELKEKLAALQVPAEVRKEVDRELNRLT
                     RIGRESMESQVIRTFLENVAELPWNIRSQEHLDLVEAQRILDEDHYALGDVKDRVLEF
                     LAVRQLRA"
BASE COUNT          464 a         1017 c         1104 g          460 t
ORIGIN      
        1 tcgatggagc cgagtccctc ggtgtcgagg ttggaatcca tcgcgtgcag ggtccgggcc
       61 aggtcggtgg cgcgatcgca gagggcatcc acggtctgct gcacctcggg gagcatcttg
      121 cgctccgagg ccgggagctt ctccatcagc ttggcgatgg cgaaccggtc gctctgcacc
      181 tgcagcattt gcggcaggta cgccccgaac tcctcggccg tgggctgagg catccggcgg
      241 ggcagcttcg cgcccttcgt catcatggtc tcgaccgcgt cgggcgcggg cgggcgggtc
      301 agcacgtcgc gccagctgta ccccgactgc cagagcttgg cgtagttctt cagcatcccg
      361 atgcccatgc cgaacgtcgg gaacaggaac cagggagtgt cgagcccggt agccacgttg
      421 atgccgaagc agccgaggga gaccgcggcc cagctggcga actggccccg cacctgctgg
      481 acgatcctcg gctcccccgt gtccgggatc gcggcatcgc cgccgggctg ccgccgcggg
      541 tggcgcgggc ccgcgcgcgc gagcgcccgc tggtcgcggt cgagcccggc caggcgggcg
      601 tcgttcgctc cccggtccag cacgccttgg ggccgggtcc ggcgcggact cgcggtcgac
      661 ccgcgcgggg ctgggggcgc gggatcccga gcgccgggcc gcgtccccgc ccggcttgcc
      721 cgccagccga gaccggtcgg ctggtagccg accacgacgc ggttctccag cgcgcggcgg
      781 agcgagtcgg cggtgggcca ccggttctcg gggtccttct ccaggcagcg gctcaccgcc
      841 agagcaagat cctccgggac atcgggccgc cggcctcgca cgtcgggtgc ggcctcggtg
      901 atctgcttca tcaggatccc ggcaacggtg ggggcgttga agggcagctc tcccgtgagc
      961 atctggaagg tgacgatgcc gaggctgtag aggtcggagc gcccgtcgat ctcgcgctcg
     1021 ccggcggcct gctccgggct catgaaggcc ggcgtgccga tggcgacgcc ggccccggtg
     1081 agggtggcgc cggagctgcc cgagagcgcc ttggcgatcc cgaagtccgt caccatcacc
     1141 cggccccggg agccctcgag gaggatgttg tcgggcttga tgtcgcggtg aatgatggaa
     1201 agggcgtggg cggccccgag cgcgtccgcc gactcggcca tgatccggcg ggtttcctcg
     1261 accgggagcc tgccccggcg ccggatcctg ctcgccaccg actcgccgtc cacgtacccc
     1321 atgacgaagt acaccaggcc gaacccctcg ccgaccgtgt ggatgggcac gatgtgggga
     1381 tggctcagct tggcggcggt ctgggcctcg cgggtgaagc gctcccgaat gtcggactgg
     1441 aaggcgagct cggggggcag gaccttgatg gccacccggc gctggagccg ctcgtcgcgg
     1501 gcgcgataga cgacccccat cccaccccgg ccgacttctc cctcgatcgt gtacgcgtcg
     1561 cccagcgcct gcgcgaggcg cgtcggcagc ggctgatcgg acggagcggt cacgggtagg
     1621 atggccccgg ggcggaggtc acgggaccgc agtcgtcgaa ctggcccgcg gaggagcagc
     1681 cggacatggc agcaaatctg tactcacgtg aggccagccg ccaccctgac gggctgtacg
     1741 cgccatgtca cgttgagcga gagcgaagaa accatggtgg cgtggtcacg ttcgccgctc
     1801 gaggtgacat tatggcagcg aaccgttcgt cggctccgat ttgctgccga aatgccgtcg
     1861 agccaacatc ctccgggaaa cccggagtgc tcctaacttg ttaggagaca caacggaggc
     1921 gggtcacatc gtggcacgtt cgctgcacct ggggggccat tcgtgttttg ggcctgccac
     1981 tttccccctg taatgggggc tcggaaggag taggagatac atgcccgaac gtttgactct
     2041 gccggtgctg ccgctgaggg aagtggtgct gttcccgggc gtcaccgcac ccatcggggc
     2101 gggccgcccc gcgacgctgc gcgcgatcga gtccgcgttg agccagtccg accgcctggt
     2161 cttcgccgtc tcgcagcggc agaacgtcga gagtgtgacc ccggaagtgc tctacaccat
     2221 cggaaccatc gcccgaatcg gccagctcca gcgagggctg tcggggatgc agttgctgct
     2281 ccacggcgag cggcggggca tcgccatgca ctacaccgag aaggagggct ttctccaggc
     2341 catcgtgcgc gaggccgagg agatggctcc cctgaacgcc aacgattcgg ccttcgtcgc
     2401 gctgcaccgc gaggcgcgca cccgcgccgc ggagctgggg cagaaatccg ggcttcccga
     2461 cgaggtggtc cagcaggtgc tggccggcgt gaacgatccc ggccgcttcg ccgacctggt
     2521 cgccggctac atcgacatca cgcccgggga ccggcagatc ctcctcgaga cgctgagcgt
     2581 ggaggagcgg ctccgccggg tgctggtgca cgtccagcga cagatcggcg tgctggatgc
     2641 gcaggaggac atcaagtccc aggtccagga ggagctgggc gagcggcagc gggagatgtt
     2701 cctccgcgag cagctcaaga ccatccagcg cgagctgggc gaggacgatg agcgcgacga
     2761 cctccgcgag ctgaaggaga agctggccgc gctccaggtt cccgccgaag tgcggaagga
     2821 agtggaccgg gagctcaacc ggctcacccg gatcggccgt gagtccatgg agtcgcaggt
     2881 catccgcacg ttcctggaga acgtcgcgga gctgccctgg aacatccgaa gccaggagca
     2941 cctcgacctg gtcgaggccc agcggatcct ggacgaggac cactacgccc tgggcgatgt
     3001 gaaggaccgg gtactggagt tcctggcggt tcgacagctt cgggc
//
LOCUS       DASUYN010000344         2655 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_771146, whole genome shotgun sequence.
ACCESSION   DASUYN010000344 DASUYN010000000
VERSION     DASUYN010000344.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2655)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2655)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2655
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_771146"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(31..1422)
                     /locus_tag="VF061_06750"
     CDS             complement(31..1422)
                     /locus_tag="VF061_06750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669239.1"
                     /translation="MRRAVLRFCVRAGVLGGLLIPSAPLSAQQSLTIYNDGRVLVRRT
                     LSVAVPKGASSQRVPLGAIQPASVFSLDSAVAITGLAYDGAIDEASVLRRSVGRRLVF
                     RSALPDRVDTVTALVLGVDPLRLQLPDGRVTFAAPGAALYPADLVVSDPAATLQLQSA
                     RAVDRLRLGYFTGGASWQASYQVMLGPKDARVSGMAVLESQALRAEDAEIQLLAGAVG
                     RAEGPVPPPRPLLRAQKAAEMAFADAGPVEQRVGEFHLYTLAGRSTLLPGLTTSVALF
                     EPAGVAYQRNYIVRGMIPYWGYLPQQGEETEVPVEVSYTLKRPRKSAFGDRPLPGGVV
                     RLYQADSTGRQQLVGEAAMDHTAPGEDLRLAAGTAFDLTARRVQTTYVTRRDSSQAGI
                     RTLATADYRVTIRNATDSAATVDVHEERAGEWSVVSSSVPAEKLSSTLTRVRVAVPAR
                     GEAQLTYRVRIVW"
     gene            complement(1419..1709)
                     /locus_tag="VF061_06755"
     CDS             complement(1419..1709)
                     /locus_tag="VF061_06755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669240.1"
                     /translation="MPSLGASPEVPCARCGNRIAGLPWGERCAQCRAELSRRAGRLAN
                     RISLAATVLMGAYVALSMPPQPMARLYGAIAVVATYIVVRRIAGRVAMEMMR"
     gene            complement(1684..>2655)
                     /locus_tag="VF061_06760"
     CDS             complement(1684..>2655)
                     /locus_tag="VF061_06760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate dehydrogenase family
                     protein"
                     /protein_id="HEX6669241.1"
                     /translation="EITAQTVRILEATGLGFSWDEELAGMAAVDATGTPLPDATVESI
                     RKNRLALKGPLTTPVGSGFRSVNVGLRKEFELFANIRPAKSIVPGGRFENIDIVLVRE
                     NLEGLYIGVEHFVQVGDDPRAVAESMAIVTRMGCERIIRYAFEYALKQGRRKVTIVHK
                     ANILKMVSGLFLEVGREIAREYEGRVEAADMIVDNTAMQLVLRPEQFDVMVTTNMFGD
                     ILSDEVSGLVGGLGLAPGANIGTKAAIFEAVHGSAPDIAGKGVANPSAQILAAAMMLD
                     HLGELERAERIRTAVVDTIVRDNVRTRDLGGTASTLEFGSAVARRVA"
BASE COUNT          371 a          959 c          957 g          368 t
ORIGIN      
        1 tgggcgatga ggatgtggtc ggcgctcatc tcaccacacg atgcgcacgc gataggtgag
       61 ctgggcctcg ccccgggccg gcaccgccac ccggacccgg gtgagggtgg acgacagctt
      121 ctccgccggc accgagctcg acacgacgct ccactcgccg gcgcgctcct cgtgcacgtc
      181 cacggtggcc gcgctgtcgg tggcattccg gatggtgacc cggtagtccg cggtggcgag
      241 cgtccggatc cccgcctggc tgctgtcgcg gcgggtgacg taggtggtct gcacccgccg
      301 ggcggtgaga tcgaacgcgg tccccgcggc gagccggagg tcttcgccgg gcgcggtgtg
      361 atccatggcg gcttcgccga cgagctgctg ccgcccggtg ctgtcggcct gatagagccg
      421 caccacgccg ccgggcaggg gccggtcgcc gaacgccgac ttgcgggggc gcttgagggt
      481 gtagctcacc tcgaccggga cctcggtctc ttccccctgc tgcgggaggt agccccagta
      541 ggggatcatg ccccgcacga tgtagttccg ctggtaggcc acgccggccg gctcgaagag
      601 cgcgaccgac gtggtgagtc ccggcagcag ggtgctcctg cccgccaggg tgtagagatg
      661 gaactcgccg acccgctgct ccaccggccc ggcgtcggcg aacgccatct ccgcggcctt
      721 ctgggcccgg agcagcggcc ggggcggcgg caccggcccc tccgcccggc ctaccgcgcc
      781 ggcgaggagc tggatctcgg cgtcctccgc ccggagcgcc tgggactcga gcaccgccat
      841 cccgctcacc cgcgcgtcct tcgggcccag catcacctgg tagctcgcct gccaggaggc
      901 gcccccggtg aagtagccca gccggaggcg gtccaccgcg cgggcgctct ggagctggag
      961 cgtggcggcg ggatcggaca cgacgaggtc ggcggggtag agggcggccc ccggcgcggc
     1021 gaaagtcacc cggccgtcgg gcagctggag ccggagcgga tccaccccga ggaccagcgc
     1081 ggtgaccgtg tccacccggt cgggcagcgc cgagcggaac accagccgcc ggccgaccga
     1141 gcggcgcagc acgctggcct cgtcgatcgc gccgtcgtac gccagcccgg tgatggccac
     1201 cgccgagtcg agcgagaaga ccgaggccgg ctggatcgcg ccgagcggga cccgctggct
     1261 cgacgcgccc ttggggaccg ccacgctcag cgtgcggcgg accaggaccc ggccgtcgtt
     1321 gtagatggtg agcgactgct gggcggacag cggggccgag gggatcagaa gcccacccag
     1381 gacgcccgcc cgcacgcaga accgcagcac tgcccgtctc atctcatcat ctccatggcc
     1441 acccggccgg caatgcgtct cacgacgatg tacgtggcta cgacggcgat ggcgccatac
     1501 agacgggcca tcggctgcgg gggcatgctg agggcgacgt aggcccccat cagcacggtc
     1561 gcggcgaggg agatccggtt ggcgaggcga ccggcgcgcc gggagagctc cgcccggcac
     1621 tgggcgcatc gctcgcccca gggcagcccg gcgatccggt tgccgcagcg ggcgcagggg
     1681 acctcaggcg acgcgccgag cgacggcact cccgaactcc agggtggagg cggtgccgcc
     1741 gagatcccgg gtccggacgt tgtcccggac gatggtatcg accaccgcgg tccggatccg
     1801 ctcggcgcgc tcgagctcgc cgaggtggtc gagcatcatc gcggcggcca gaatctgggc
     1861 cgaggggttg gcgacgccct tgcccgcgat gtccggggcg ctgccgtgca ccgcctcgaa
     1921 gatcgccgcc ttggtgccga tgttggcccc gggcgcgagc ccgagcccgc ccaccagccc
     1981 cgacacctcg tcgctcagga tgtcgccgaa catgttggtg gtgaccatga cgtcgaactg
     2041 ctcgggccgg agcaccagct gcatggccgt gttgtccacg atcatgtcgg ccgcctccac
     2101 ccgcccctcg tactcccgcg cgatctcgcg ccccacctcc aggaaaagcc cgctcaccat
     2161 cttgagaatg ttggccttgt gcacgatggt gaccttgcgc cggccctgct tgagggcgta
     2221 ctcgaaggcg tagcggatga tgcgctcgca gcccatgcgg gtcacgatgg ccatcgattc
     2281 ggccaccgcg cggggatcgt cgcccacctg cacgaagtgc tcgaccccga tgtacagccc
     2341 ctcgaggttc tcccgcacca gcacgatgtc gatgttctcg aaccggccgc cgggcacgat
     2401 ggacttggcg gggcggatgt tggcgaagag ctcgaactcc ttccgcagcc ccacgttcac
     2461 cgagcggaag ccgctgccga ccggggtggt gagcggcccc ttgagggcga ggcggttctt
     2521 ccggatgctc tccaccgtgg cgtcggggag cggggtgccg gtcgcgtcca ccgcggccat
     2581 gcccgccagc tcctcgtccc agctgaagcc caggccggtc gcctcgagaa tgcggaccgt
     2641 ctgggcagtg atttc
//
LOCUS       DASUYN010000345         2014 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_333593, whole genome shotgun sequence.
ACCESSION   DASUYN010000345 DASUYN010000000
VERSION     DASUYN010000345.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2014
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_333593"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..625
                     /locus_tag="VF061_06765"
     CDS             <1..625
                     /locus_tag="VF061_06765"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX6669242.1"
                     /translation="MVRTFQITKSLAAMPVIDNMMLAAPAQPGERFINLIVRPGAVRS
                     REKVVREEALELLDVFNLTQLADAYAGTLSGGQRKLLELARALMARPKLLLLDEPMAG
                     INPTLGKRLLDHMQRLRKEEGVTFLFIEHDMEVVMNHSDRVVVMAEGAVITDGEPHEV
                     RSDQRVIDAYLGETVQDSASSKPKAAPRRKPKAKAGPKPKPNGGGRT"
     gene            622..1362
                     /locus_tag="VF061_06770"
     CDS             622..1362
                     /locus_tag="VF061_06770"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX6669243.1"
                     /translation="MSPAPDNGALLSTAGLTAGYVPEVDILTGVDLDVREGEIVTVIG
                     PNGAGTSTLIKSIFGLLPPRSGKVLLRGEDLTGLAPHSITRRGMSYVPQLDNVFQSLS
                     VEENLEMGALEQRTANKRIDVIYEIFPRLGERRTQTAGTMSGGERQMLAMGRALMPEP
                     TLLLLDEPSAGLAPAFVEAIFEKVEEINEAGVTIVMVEQNARRALSMSDRGYVLDLGT
                     NRFEGPGNELLEDPKVAELYLGGTARIE"
     gene            complement(1461..>2014)
                     /locus_tag="VF061_06775"
     CDS             complement(1461..>2014)
                     /locus_tag="VF061_06775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669244.1"
                     /translation="DFPETFIKVAPALQRTGNWDPKKAWGTDGLYSGDLAADIGASGE
                     GLRGTFPGTPEDAQQSVAFDKLWNQSEPTDVERLAFDAQQFDAVTLCYLAAVAAGSTD
                     GQEMADALIDLTAPGGTEYTWEELPAAVQALQDGEDIDYQGAAGSLDLNEDGDATGEV
                     YDLYQFTGGSADVVGEVEVVVPE"
BASE COUNT          341 a          682 c          681 g          310 t
ORIGIN      
        1 gatggttcgc accttccaga tcaccaagtc gctggccgcg atgccggtga tcgacaacat
       61 gatgctcgcg gcgcccgcgc agccgggcga gcgcttcatc aacctgatcg tcaggccggg
      121 cgcggtgcgc tcccgcgaga aggtggtccg cgaggaggcg ctggagctgc tggacgtctt
      181 caacctgacc cagctggccg acgcctacgc cgggacgctg tcgggcggcc agcgcaagct
      241 gctggagctg gcgcgcgccc tgatggcgcg gccgaagctg ctgctgctgg acgagcccat
      301 ggccggaatc aatcccacgc tcggcaagcg gctgctcgac cacatgcagc gcctgcgcaa
      361 ggaggagggc gtcaccttcc tcttcatcga gcacgacatg gaggtggtca tgaaccactc
      421 cgaccgcgtc gtggtgatgg ccgagggcgc ggtgatcacc gacggggagc cgcacgaggt
      481 gcgctccgac caacgggtga tcgacgccta tctgggcgag accgtgcagg actcggcgtc
      541 ctcgaagccc aaggcggcgc cgaggcgcaa gccgaaggcg aaggccgggc cgaagcccaa
      601 gcccaacggc gggggcagga cgtgagcccc gcgcccgaca acggcgccct gctcagcaca
      661 gcgggcctga cggcgggcta cgtgccggag gtggacattc tcaccggcgt ggacctggac
      721 gtgagggagg gcgagatcgt gaccgtgatc ggtcccaacg gcgccggcac gtccaccctc
      781 atcaagtcga tcttcgggct gctgccgcct cgctcgggca aggtgctgtt gcggggggag
      841 gacctgaccg ggcttgcccc gcactcgatc acccggcgcg ggatgagcta cgtacctcag
      901 ctcgacaacg tctttcaaag cctcagcgtc gaggagaacc ttgaaatggg ggcgttggag
      961 cagcgcacag ccaacaagcg catcgacgtc atctacgaga tctttccccg gctcggcgag
     1021 cggcgcaccc agaccgccgg cacgatgagc ggaggcgagc gccagatgct ggccatgggt
     1081 cgtgcactga tgcccgagcc cacgctgctg ctgctcgacg agccttcggc cggcctggcc
     1141 ccggcgttcg tcgaggcgat cttcgagaag gtcgaggaga tcaacgaggc gggggtgacg
     1201 atcgtgatgg tggagcagaa cgcgcgccgc gcgctcagca tgtccgatcg cggctacgtg
     1261 ctcgacctcg gcaccaaccg cttcgagggt ccgggcaatg agctgctcga agaccccaag
     1321 gtcgccgagc tctacctggg cggtaccgcc cgcatcgagt agcccggttc ggcttcgacg
     1381 cgattccacc ccgaaacgag aagggccggg gcctcaaggc cccggccctt ctgagttccc
     1441 ttgtgtgtct cgaccgacga ctactcggga acaaccacct cgacctctcc aacgacatcg
     1501 gcgctgccac ccgtgaactg atagaggtcg tagacctctc cggtggcgtc accgtcctcg
     1561 ttgaggtcaa gtgacccggc tgcaccctgg tagtcgatgt cctcaccgtc ctggagcgcc
     1621 tggacggccg ccgggagctc ctcccaggtg tactcggtac cgccgggggc ggtcaggtcg
     1681 atgagcgcgt ccgccatctc ctgtccgtca gtggaaccag cggccactgc ggccaggtag
     1741 cagagggtca cggcatcgaa ctgctgggcg tcgaacgcga gtcgctccac gtccgtcggc
     1801 tccgactggt tccacagctt gtcgaacgcc acgctctgtt gcgcgtcctc gggtgtgccc
     1861 gggaacgtgc cgcggagccc ttcaccgctc gcaccaatgt cagccgccag atcgcccgag
     1921 tagaggccat ccgtacccca ggccttcttc ggatcccagt tcccggtccg ctggagcgcg
     1981 ggagcgacct tgatgaaggt ctccgggaag tcga
//
LOCUS       DASUYN010000346         2398 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_772673, whole genome shotgun sequence.
ACCESSION   DASUYN010000346 DASUYN010000000
VERSION     DASUYN010000346.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2398)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2398)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2398
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_772673"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(3..173)
                     /locus_tag="VF061_06780"
     CDS             complement(3..173)
                     /locus_tag="VF061_06780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669245.1"
                     /translation="MKPQTDYIRHAARLARKLQMDAAMGGSPQPDAEFYKALSKALDE
                     IAAGLELVAKAD"
     gene            262..1464
                     /locus_tag="VF061_06785"
     CDS             262..1464
                     /locus_tag="VF061_06785"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX6669246.1"
                     /translation="MPPILLTVYPDECDAFGHLNQASFLSLFERARWEVLRTGPGMDV
                     FDRSGAWPAVRRTVIEYHSAAYPGDVLRFEQELTHVGRTSFTMRQVAHRSSDDALIAT
                     AEFVFVCVSRNGRPVPVPREFHDFMAARRRGGGQLQRLAVNGVSLAVEVRGDGPAVLF
                     IHGYPFDHTIWTHQVAALEGWCRIAPDLRGMGQSDAPDLGYNVETYAEDLAELLDLLG
                     AREVVLVGLSMGGYVAFEFLRRWRDRVRGLVLVDTRAEADTAEARMSRDASAATAREQ
                     GAGAIAEAMLPKVLGASTLGGSSATVERVRAMMAATPVAGIVGALGAMRDRPDSTPLL
                     PQLAGLPTLVIVGDEDELTPPGQARAMAEAIPGASLVVIRSAGHIPPVERPAETTDAL
                     LAFLAGLP"
     gene            complement(1611..1874)
                     /gene="fdxA"
                     /locus_tag="VF061_06790"
     CDS             complement(1611..1874)
                     /gene="fdxA"
                     /locus_tag="VF061_06790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin"
                     /protein_id="HEX6669247.1"
                     /translation="MTYVITEPCIGVKDRACVDVCPVDCIYEGEDQLYIHPDECIDCG
                     ACEPECPVTAIFPEEDVPPNMTSYIEKNRVIFNSDTPPGRPQR"
     gene            1973..>2398
                     /locus_tag="VF061_06795"
     CDS             1973..>2398
                     /locus_tag="VF061_06795"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEX6669248.1"
                     /translation="MLLRLQLLFILPGLNLAAASPLAAQDCRPPRTALVLSGGGAKGL
                     AHIGVLAALDSLGIRPDMVVGTSMGATVGALYASGYSGRELDSLARITPLNQMFRSYR
                     PRAPRSLGVLRPLVTWEQGERRFTLQSASVVESEVNALVN"
BASE COUNT          324 a          816 c          863 g          395 t
ORIGIN      
        1 cgtcagtcgg ccttggcgac gagctcgagg cccgcggcga tctcgtcgag ggccttggac
       61 agcgccttgt agaactcggc atcgggctgg ggactgccgc ccatcgcggc atccatctgg
      121 agcttgcgcg cgaggcgcgc ggcgtggcgg atgtagtcgg tctgcggttt catggggcct
      181 cgagccggat cgctgagctg ccggacctgc gaaggaacgc tgtagtatat cctcccccgc
      241 cgacgaggta tcttggcacc gatgcccccg attctcctca ccgtctaccc cgacgagtgc
      301 gacgccttcg gccacctgaa ccaggcgtcg ttcctcagcc tcttcgagcg ggcacgctgg
      361 gaggtgctgc ggacgggccc ggggatggat gtgttcgacc gcagcggcgc ctggcccgcg
      421 gtgcgccgca cggtgatcga gtatcacagc gccgcctatc ccggcgacgt gctccgcttc
      481 gagcaggagc tgacccacgt cggccgcacc agcttcacca tgcgccaggt cgcccaccgc
      541 tcgtccgatg acgccctgat cgcgaccgcg gagttcgtgt tcgtctgcgt gagccgcaac
      601 gggcgcccgg tgccggtccc ccgggagttc cacgacttca tggccgcgcg ccggaggggc
      661 ggcgggcagc tgcagcggct cgcggtgaac ggggtctccc tcgcggtgga ggtgcggggg
      721 gacgggccgg ccgtgctctt catccacggc tacccgttcg accacaccat ctggacccac
      781 caggtcgccg cgctggaggg ctggtgccgc atcgcccccg acctgcgcgg catggggcag
      841 tccgacgccc cggatctcgg gtacaacgtg gagacctacg ccgaggacct ggccgagctg
      901 ctggacctgc tgggggcgcg ggaggtggtg ctggtgggac tctccatggg aggctacgtc
      961 gccttcgagt ttctccgccg gtggcgcgat cgggtgcgag gcctggtgct ggtggacacc
     1021 cgtgcggagg cggataccgc cgaggccagg atgagccgtg acgcgtccgc cgccaccgcc
     1081 cgggagcagg gggccggcgc catcgccgaa gcgatgctgc ccaaggtgct gggcgcctcg
     1141 accctgggcg gatcctccgc caccgtcgag cgggtcaggg cgatgatggc ggcgacgccg
     1201 gtcgccggga tcgtgggggc gctcggggcg atgcgggacc ggcccgacag cacgccactg
     1261 ctgcctcagc tggccggatt gcccacgctg gtcatcgtag gagacgagga tgagctgacg
     1321 ccgccgggcc aggcgcgggc gatggccgag gccatcccgg gggcgagcct ggtcgtgatc
     1381 cggtccgccg ggcacatccc gccggtggag cggcccgcgg agaccaccga cgccctgctg
     1441 gcatttctcg ccgggctgcc ctgaaacctt tcgcccgtta cgggcgttgt gcctgatggc
     1501 gggacgatca tgggccgagt ggtccgggtc tccccgtcct caccaaccac aacggtcccg
     1561 cgctcgcggc caaggcagta cgagcgcggg gccgcctttc ttgtcggggg tcagcgctgg
     1621 gggcggccgg gcggggtgtc gctgttgaag atcacccggt tcttctcgat ataggaggtc
     1681 atgttgggcg ggacatcctc ctccgggaag atcgcggtca ccgggcactc tggctcgcac
     1741 gcgccacagt cgatgcactc gtccgggtga atgtagagct ggtcctcgcc ctcatagatg
     1801 cagtccaccg ggcacacatc aacgcaggcg cggtccttca ccccgatgca gggctcggtg
     1861 atcacatagg tcattgccgc cgctcctcca gagaacttgc cgtcgccgct ccgtgggcaa
     1921 aggtatacgg attcggagtg ggtggcgcaa ggggtgtgta tcttccccgt acatgcttct
     1981 ccggcttcaa cttctcttca ttcttccggg actgaatctg gccgccgcga gcccgctcgc
     2041 ggcgcaggac tgccgaccgc cacgcaccgc tctggtgctc tcggggggag gggccaaggg
     2101 cctcgcccac atcggcgttc tggcggccct cgacagcctc ggcatccgcc ccgatatggt
     2161 cgtcgggacc agtatggggg cgaccgtcgg ggcgctctac gccagcgggt acagcggtcg
     2221 cgagctggac tcgctggctc gaatcacgcc gctcaatcag atgttccgga gctaccggcc
     2281 ccgcgcaccg cgctcgctcg gggtgttgcg cccgctggtg acctgggagc agggggagcg
     2341 ccggttcacg ctgcagagcg cctcggtcgt ggagtcggag gtgaacgccc tcgtgaac
//
LOCUS       DASUYN010000347        11192 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1216581, whole genome shotgun sequence.
ACCESSION   DASUYN010000347 DASUYN010000000
VERSION     DASUYN010000347.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 11192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11192
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1216581"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1238)
                     /locus_tag="VF061_06800"
     CDS             complement(<1..1238)
                     /locus_tag="VF061_06800"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX6669249.1"
                     /translation="MTRHGNDEVLALTRRYLEMVEGRELSLDEKQAFIAETVEAYERH
                     VNRGFIGYRKSVTEAGQFAALEWSGRGSMLRDLLGREYIDCLGGYGIFSAGVNHPRIL
                     GAVACQMQRMALNSQELLEPWRAALARLLAMVTPGELGNAFFINNGTDAIEGAIKLAR
                     LYTRRNLFVSTLGGFHGKSLGSLSLMGKASFREPFAGGLQDVRFVPYGEADALEAELA
                     KAEHVGTPIAAFVVEPVQGEAGGVVPPDDYLPRVRELCTRHGTLLIADEIQTGMGRTG
                     KLWGVDHSGVAPDIMCLGKSIGGGVMPLSAFIAPAEIWEVMIPNPIIHSTTFGGNPMA
                     CAAGIAAIEVTLEEDLPGQAAAKGDFLLRELAALRERYPQVLSDAHGRGLLIGMEFPT
                     DELGFAVAAGLFKRGVLVAGT"
     gene            complement(1235..2383)
                     /locus_tag="VF061_06805"
     CDS             complement(1235..2383)
                     /locus_tag="VF061_06805"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0019808 - polyamine binding [Evidence
                     IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015846 - polyamine transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     substrate-binding protein"
                     /protein_id="HEX6669250.1"
                     /translation="MSKRKELERLVGELESGGISRRDFVRRAMALGLSVSSVGALLSA
                     CGGEKGGQAGEGAAQADAELGPIEKELHIYNWSDYIAEDTVPNFEKEFGVRVTYDTYE
                     SNEEMVAKLQAGASGYDIIMPSGYIIPVLVATDLITPLNKKYLTNWGNVAPIFQNLPS
                     DPGNTHTVPWQWGTSGIAYRTDKLKTPVDSWAVFHDARYHGKLTMMDDGREVIGAFLR
                     YRGHSLNSTDPQQLARAKADSIEAKKHLKAYISAPVKAQLISGDVWIAQLWNGDTTQA
                     KAEQPNLAYAIPKEGCTIWGDSMCVPASAPNKRAAHEWMNYILRPEVGAALSNATGYG
                     TPNAASAKLLDTPVPYPSEEELKRLEYQVDLGRDTATWDQIWTEIKSA"
     gene            complement(2409..3704)
                     /locus_tag="VF061_06810"
     CDS             complement(2409..3704)
                     /locus_tag="VF061_06810"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEX6669251.1"
                     /translation="MGWRGRSRKGIGGGLIERCLWEEGLPAWEARGPLPSRADVAIVG
                     AGYTGLSAALALARHGASVVVLERHRAGWGASGRNGGFVLPGFQPDAAELVRRYGVER
                     TRALLAVSLEAIEWLEGLVEREALDCGYARRGWISLAAKPGHLRDLAREAAVLRQLGH
                     ETVVLGRAELRDEVGTDRYCGGLLEPVAGALHPGRYCAGLARAALRAGAVLVEGAEVL
                     GVTRVGGVATVSTSAGPVAAEEVLVATNGYTGPAFPSLQSRVVPLGSYVVATAPLADG
                     VAASVLPRGRVVSDTWNLLHYFRLSDDGRLVFGGRASFTPTDAGRSGRILERDLRAVF
                     PRLSAVRLEYAWSGSLGVARDRMPHAGRMDGVHYALAYAGHGVAMASWLGARMGDALA
                     GRGAVPALAGELPPIPLYRGRPWFLPVVGGYYRVMDWIR"
     gene            complement(3682..4452)
                     /locus_tag="VF061_06815"
     CDS             complement(3682..4452)
                     /locus_tag="VF061_06815"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX6669252.1"
                     /translation="MQRLPRWVIAVAVGVYAFLHLPILVLVAFSFNASKFSASWVGFT
                     FDWYYRLLERPDILRGLKASLIVGGVSTVVSAVLGTLVALALARHRFRGRTAFEGFLY
                     VPIVTPEIVVGISLLILFALVNIPLGLTTIVIAHVAFSLSFVVIVVLARLEGMDQNLE
                     EAAMILGADEITTFWKVTVPQLWPGILSGALLAFTMSFDDFVITSFVSGSGSSTLPIV
                     VYGMVRRNIEPSINAISTIILLVTTVLIYVADRVAREK"
     gene            complement(4453..5337)
                     /locus_tag="VF061_06820"
     CDS             complement(4453..5337)
                     /locus_tag="VF061_06820"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX6669253.1"
                     /translation="MGSLRERLLAWLHPRPQVQAWSLLAPGGLWLLVFFLVPILIMFV
                     YSMMPRGIYGGVEPGFTLEHYRRFFDPLYLDILRRTFVWSVACTVICLVLGYPVAYAI
                     ARGGRWKNFLLFLVVLPFWTSFLVRTFAMIFLMRDTGLINSWLLGAGLVEEPITMLYT
                     PFAVMAGLVYGFLPFMILPIYASLEKLDLSLLEAAEVLGARPAERFRRITLPLSMPGV
                     VAGCLLVFIPALGSFLTADLLGGAKQLMIGNLVQNQFSAARNWPFGSAASFIVMALVL
                     VAVMLYLRVKDRAPGEAV"
     gene            complement(5338..6387)
                     /locus_tag="VF061_06825"
     CDS             complement(5338..6387)
                     /locus_tag="VF061_06825"
                     /inference="COORDINATES: protein motif:HMM:TIGR01187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX6669254.1"
                     /translation="MNDVSFEIQRGEFFSLLGPSGCGKTTTLRLLAGFEQPDDDGGEV
                     RLLGEVVNRKRPYERKVAMVFQNYALFPHLSVQRNVAFGLEQRKTPKAEIGDRVHRAL
                     EMVRLKPETFARRMPGQLSGGQRQRVALARALVLEPAILLLDEPLGAIDLKLRKEMQL
                     ELKALNKQLGTTFVYVTHDQEEALTMSDRIAVMDNARVAQLGTPAEIYENPRTAFVAK
                     FIGESNFFEGTADRRNGRSWEVARAGGGRFLVPEHPALREGKPVRIAVRPEWMDVWRP
                     DGVPAGENAVGGTIRDVIYLGETMHVIVSVPDAEDVTVAVRNEGQLIKPLPWRRGDQA
                     AVAWLPEDCQILEET"
     gene            complement(6490..7860)
                     /gene="gabT"
                     /locus_tag="VF061_06830"
     CDS             complement(6490..7860)
                     /gene="gabT"
                     /locus_tag="VF061_06830"
                     /EC_number="2.6.1.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR00700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003867 - 4-aminobutyrate transaminase
                     activity [Evidence IEA];
                     GO_process: GO:0009450 - gamma-aminobutyric acid catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-aminobutyrate--2-oxoglutarate transaminase"
                     /protein_id="HEX6669255.1"
                     /translation="MAGVIEIRTEIPGPKSRALLARRAAAVPRGVPAVTPIAVAHAEG
                     AVVTDVDGNRMIDFAGGIGVVNTGHRHPGVVDAVRNQLDRFAHVCFPVSTYEPYVELA
                     ERLNRLTPGSHQKRTFMVNSGAEAVENAVKVARAFTGRQAIVCFEHGFHGRTNLAMAL
                     TSKVVPYKKGFGPFAPEIYRLPYPYCYRCPQGVARNGEARGDCCMAAAGWLDRQFAAL
                     VDPGSVAAIVMELELGEGGFVPAPVEYVHSLAAFARAHGILFVADEIQTGFGRTGTLF
                     ACEHYGLVPDIITTAKSLAGGLPLAAVTGRAEVMEAAEPGGLGGTYGGNPLACAAALA
                     VLDAMERERIPERAARAGERIATRFRDWAGCYPAIGDVRGLGAMVGMELVADRVSRAP
                     DKALAGRLLAAGLRRGVILLSAGTYGNVIRVLAPLTAEDALLDEGLDAMAEALAEAVG
                     GSRQPL"
     gene            8304..9542
                     /locus_tag="VF061_06835"
     CDS             8304..9542
                     /locus_tag="VF061_06835"
                     /inference="COORDINATES: protein motif:HMM:NF027964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="saccharopine dehydrogenase C-terminal
                     domain-containing protein"
                     /protein_id="HEX6669256.1"
                     /translation="MKTLLLGAGAVGTVSALKFVQEAMLEQLVIADAVSARASLLADR
                     LNDPRVSAIGLDAGDRAAVARTIRETGSTIVLNAALPVTNLEVMRACLDAGCDYIDLA
                     SGGTDADGVPKLEDQFALDGDFRAAGRIALLGMGADPGTTNVYAAYAAKHLLDTVTEI
                     RVRDGDNSVCQGHDGFVAAFSPWVFIDECLCKAVSWRDGRYHLEEPLTGFEPFEFPEL
                     GILNCYYVDHEESKTLPRFFPRARTVDFKLCMDDVTVETLRVMKRLGLSGKNRVQVGD
                     ASIAPRDLVVSLLPQPKDLAGRMRGKTCVGTLVRGLKNGEPRAYYIYNVSDHEAAYGE
                     LGVQATAYQTGIPPVIAARLLHQGIWRGAGVMAPEQFDPDPFLERLSREGMPWHIRDD
                     SARTGIPRVRPLTTRETAAA"
     gene            9699..>11192
                     /locus_tag="VF061_06840"
     CDS             9699..>11192
                     /locus_tag="VF061_06840"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEX6669257.1"
                     /translation="MTSTATATAKARKAEVARYQMYIDGKFVDAADGGTFDVYDPSTE
                     GVIATCPAGSAADMDRAAVAAHRAFYEGWRAVSAQERGRVLFRLAERIRARRDELAQL
                     ETLNSGKPIVESEYDMDDAATCFEYYGGLATKINGEVLPVPAEAVSMAMREPMGVAGQ
                     IIPWNYPLLMAAWKIAPAIAAGCTVVLKPAEQTPLTILKLAEDFEAVGLPPGVVNIVT
                     GDGPGAGAPLVAHPKVRKIAFTGSAEVGKLIMRSAADQLKRVSLELGGKSPNIFFSDA
                     DFENAVDGALFGTFINQGEVCSAGSRVLVQQDIYRKFVDAAAAKAKTIRLGPGLDRET
                     KMGPLVSAEQRDRVAGYLDTGRQEAKVAVGGGRPKQFEKGWYVEPTIFYDVDNGARIA
                     QEEIFGPVMSVIPFKDEADAIRIANASPYGLAAAVWTRDIFKAFRVVKALEAGIVWVN
                     HMQPTFVEAPWGGYKMSGFGRELGHWGVEEYLETKQVFINLDEKPIGW"
BASE COUNT         1814 a         3916 c         3864 g         1598 t
ORIGIN      
        1 gtgcccgcca ccagcacccc gcgcttgaac aagccggcgg ccacggcaaa ccccagctcg
       61 tcggtgggaa actccatgcc gatgagcagg ccacggccgt gagcgtcgct cagcacctga
      121 gggtatcgct cccgcagcgc ggccagctcg cggagcagga aatcgccttt ggcggcggcc
      181 tgcccgggca gatcctcctc cagcgtcacc tcgatggccg cgatgccggc ggcgcaggcc
      241 atcgggttgc cgccgaaggt ggtggagtgg atgatcgggt tcgggatcat cacctcccag
      301 atctcggcgg gggcgatgaa ggccgagagc ggcatcacgc cgccgccgat ggattttccg
      361 aggcacatga tgtcgggggc cacgccgctg tggtccacgc cccagagctt tcccgtgcgg
      421 cccatgccgg tctggatctc gtcggcgatc aggagagtgc cgtgccgggt gcagagctca
      481 cgcacccgcg ggaggtagtc gtcgggcggc accacgccgc cggcctcgcc ctggaccggc
      541 tccaccacga acgccgcgat gggcgtgccc acgtgctcgg ccttggccag ctcggcctcg
      601 agcgcgtcgg cctccccgta gggcacgaag cggacgtcct ggagcccgcc cgcgaacggc
      661 tcccggaacg acgccttccc catcagcgag agcgagccca gggacttgcc gtgaaacccg
      721 cccagggtgg agacgaacag gttccgccgg gtgtagagcc gcgccagctt gatcgccccc
      781 tcgatcgcgt cggttccgtt gttgatgaag aaggcgttgc ccagctcgcc gggggtcacc
      841 atcgcgagca gccgcgccag cgcggcgcgc cagggctcca gcagctcctg gctgttgagc
      901 gccatccgct gcatctggca ggcgaccgct cccagaatac gcggatggtt cacaccggcg
      961 ctgaagatgc cgtagccgcc gaggcagtcg atgtactcgc ggcccagcag gtcccggagc
     1021 atggagcccc ggccggacca ctccagcgcg gcgaactgcc ccgcctcggt caccgatttc
     1081 cggtagccga tgaagccccg gttcacatgc cgctcgtacg cctccaccgt ctccgcgatg
     1141 aaggcctgct tctcgtcgag ggacagctcc cgcccctcga ccatctcgag gtagcgccgg
     1201 gtgagcgcga ggacctcgtc gttcccgtgg cgggtcaagc cgacttgatc tccgtccaga
     1261 tctggtccca ggtcgccgtg tcgcggccga ggtccacctg gtactcgagc cgcttgagct
     1321 cttcctcgga gggatacgga accggggtgt cgagcagctt cgcggacgcg gcgttggggg
     1381 tcccgtagcc ggtggcgttg gacagggcgg cgccgacctc gggccgaagg atgtagttca
     1441 tccactcgtg cgcggcccgc ttgttgggcg cgctcgcggg cacgcacatc gagtcgcccc
     1501 agatggtgca tccctccttg gggatggcgt aggccaggtt gggctgctcc gccttcgcct
     1561 gggtggtgtc gccgttccag agctgcgcga tccacacgtc gcccgagatc agctgggcct
     1621 tcaccggcgc ggagatgtag gccttgaggt gcttcttggc ctcgatcgag tcggccttgg
     1681 cgcgggcgag ctgctgcgga tcggtggagt tgagggaatg gccccggtag cgcaggaacg
     1741 cgccgatcac ctcacgcccg tcgtccatca tggtcagctt gccgtggtac cgggcgtcgt
     1801 ggaacacggc ccagctgtcc accggggtct tcagcttgtc ggtacggtag gcgatcccgc
     1861 tggtgcccca ctgccagggg acggtatgcg tgttgccggg atcggatgga aggttctgga
     1921 agatgggcgc gacgtttccc cagttggtga ggtacttctt gttgagcggc gtgatcaggt
     1981 cggtcgccac cagcaccggg atgatgtagc ccgacggcat gatgatgtcg tagccgctgg
     2041 cgcccgcctg gagcttggcc accatctcct cgttgctctc gtacgtgtcg tacgtcaccc
     2101 ggaccccgaa ctccttctcg aagttcggga cggtatcttc ggcgatgtag tccgaccagt
     2161 tatagatgtg cagctccttc tcgatcggac cgagctcggc gtcggcctgg gctgcgccct
     2221 cgccggcctg cccgcccttc tcgccgccgc aggcggagag cagcgcgccg acggagctca
     2281 cgctgaggcc gagggccatc gcgcggcgga cgaagtcgcg tcgggagatg cccccgcttt
     2341 ccagctctcc caccaggcgt tcgagttcct tgcgcttgct catgtggact cctctgtggg
     2401 tcgtggtgtc aacggatcca gtccatcacc cggtagtagc cccccaccac cggaagaaac
     2461 cagggcctgc cgcggtagag cggaatcggc ggcagctcgc ccgcgagcgc cgggacggcc
     2521 ccccgccccg cgagcgcgtc acccatgcgg gcgccgagcc agctggccat cgccaccccg
     2581 tgtcccgcgt acgccagtgc atagtggacg ccgtccattc gccctgcgtg gggcatgcga
     2641 tcgcgggcga cgcccaggct ccccgaccag gcgtactcca gccgcaccgc cgacagccgc
     2701 ggaaacaccg cccggaggtc ccgctccagg atgcgcccgc tccgccccgc atcggtcggt
     2761 gtgaacgacg ccctgccgcc gaacaccagc cggccgtcgt cggacagccg aaagtagtgg
     2821 agcagattcc aggtgtcgct caccacccgt cccctcggca acaccgacgc agccacgccg
     2881 tcagccagcg gcgccgtggc gaccacgtag ctccccagcg gaaccacccg gctctggagc
     2941 gacgggaacg ccggcccggt gtagccgttc gtcgccacca gcacttcctc cgcggccacc
     3001 gggccggcgg aggtgctgac cgtggcgacg ccacccaccc gcgttacgcc gaggacttcg
     3061 gcgccctcga ccagcaccgc gccggcccgg agcgccgccc gcgcgagtcc agcgcagtac
     3121 cggcccgggt gcagggcccc ggccaccggt tccagcaggc cgccgcaata gcggtcggtg
     3181 ccgacttcgt cgcgcagctc cgcgcggccc aacacgaccg tctcgtgccc gagctgccgg
     3241 aggacggccg cctcccgcgc cagatcccgc agatgacccg gcttggccgc gagactgatc
     3301 cacccccgcc gagcgtagcc gcagtccagc gcctcccgct cgaccagacc ctcgagccac
     3361 tcgatcgcct cgagcgagac ggcgagcagc gcccgggtgc gctccacccc gtagcgccgc
     3421 accagctcgg ccgcgtccgg ctgaaagccc ggcagcacga aaccgccgtt cctgccgctg
     3481 gcgccccacc ctgcccggtg ccgctccagg acgaccaccg acgccccgtg ccgggccagc
     3541 gcgagcgccg ccgagaggcc ggtatagccc gcgccgacga tcgcgacgtc ggcccggctc
     3601 ggcagcgggc cgcgggcctc ccacgccggg agcccttcct cccagaggca tcgctcgatc
     3661 aggccgcctc cgatgccctt cctacttctc cctcgccacc cgatccgcca cgtagatcag
     3721 caccgtcgtc accagcagga tgatggtgct gatggcgttg atgctcggct cgatgttccg
     3781 gcggaccatc ccgtagacca cgatcggcag ggtcgaggag ccggagccgg agacgaacga
     3841 ggtgatcacg aagtcgtcga acgacatggt gaacgccagc agggcgccgg acaggatccc
     3901 gggccacagc tggggcaccg tcaccttcca gaaggtggtg atctcgtccg ccccgaggat
     3961 catcgccgcc tcctcgaggt tctggtccat cccctccagc cgggccagca ccacgatcac
     4021 cacgaacgac aggctgaagg ccacgtgcgc gatgacgatg gtggtgagac ccagcggaat
     4081 gttgaccagc gcgaagagaa tcaggagcga gatcccgacc acgatctccg gcgtcacgat
     4141 gggcacgtag aggaacccct cgaacgccgt ccggccacgg aaccggtgcc gcgccagcgc
     4201 gagcgccacc agcgtcccca gcaccgccga gacgaccgtg gagacgccgc cgacgatcaa
     4261 actggccttg aggccgcgca ggatgtccgg gcgctcgagc aggcggtagt accagtcgaa
     4321 cgtgaaccct acccagctgg cggagaactt ggaggcgttg aacgagaagg ccaccagcac
     4381 caggatcggg aggtggagga acgcgtacac cccgaccgcg accgcgatga cccagcgcgg
     4441 gagccgctgc attcagaccg cctcccccgg cgcgcggtcc ttcacccgga gatagagcat
     4501 gacggccacc agcaccagcg ccatcacgat gaacgaggcg gcggagccga agggccagtt
     4561 gcgcgcggcg gagaactggt tctgcaccag gttgccgatc atgagctgct tggccccgcc
     4621 cagcaggtcg gcggtgagga acgagccgag cgccgggatg aacaccagca ggcagccggc
     4681 gaccacgccc ggcatcgaga gcggcagggt gatccgccgg aagcgctccg ccggccgcgc
     4741 ccccagcacc tcggccgcct cgagcaggga gagatcgagc ttctcgaggg aggcatagat
     4801 cgggaggatc atgaacggca ggaagccgta caccaggccc gccatcacgg cgaacggggt
     4861 gtagagcatg gtgatcggct cctcgacgag gcccgccccc agcagccagg agttgatgag
     4921 gccggtgtcc cgcatcagga agatcatggc gaaggtccgg accaggaagc tggtccagaa
     4981 cggcaacacc accaggaaca gcaggaagtt cttccaccgt cctccgcggg cgatggcata
     5041 ggcgaccgga taccccagca ccaggcagat caccgtgcag gcgaccgacc agacgaaggt
     5101 gcgacggagg atgtcgaggt agagcgggtc gaagaaccgg cggtagtgct ccagggtgaa
     5161 gccgggctcg accccgccgt agatcccccg cggcatcatg ctgtacacga acatgatgag
     5221 gatggggacg aggaagaaca ccagcagcca gagcccgccg ggcgcgagca ggctccaggc
     5281 ctgcacctgg ggccggggat ggagccaggc caggagccgc tcgcgcagcg agcccactca
     5341 ggtctcctcc aggatctggc agtcctccgg gagccaggcg acggcggcct ggtcgccgcg
     5401 gcgccagggc agcggcttga tgagctgccc ctcgttgcgc accgccacgg tcacgtcctc
     5461 ggcgtcgggc acgctcacga tcacgtgcat cgtctcgccg aggtagatga cgtcccggat
     5521 ggtgccgccg acggcgttct cccccgcggg gacgccgtcg gggcgccaca catccatcca
     5581 ctccggccgc accgcgatgc ggaccggctt gccctcgcgc agcgcggggt gctccggcac
     5641 caggaagcgg ccgccgcccg ctctcgccac ttcccagctc cggccgttcc gccggtcggc
     5701 cgtcccctcg aagaagttgg actcgccgat gaacttggcg acgaacgccg tccgggggtt
     5761 ctcgtagatt tcggccgggg tccccagctg ggccacccgc gcgttgtcca tgaccgcgat
     5821 gcggtcggac atggtgagcg cctcttcctg atcgtgggtg acgtacacga acgtggtgcc
     5881 gagctgcttg ttcagcgcct tgagctcgag ctgcatctcc ttccggagct tgaggtcgat
     5941 cgcgccgagc ggctcgtcca gcaggaggat ggcgggctcg agcaccagcg cgcgggccag
     6001 cgccacccgc tgccgctggc cgccggacag ctgccccggc atccggcgcg cgaaggtctc
     6061 gggcttgagc cggaccatct ccagggcccg gtggacccgg tcgccgatct cggccttcgg
     6121 cgtcttccgc tgctccagcc cgaaggccac gttccgctgc accgacaggt gggggaagag
     6181 cgcgtagttc tggaagacca tcgccacctt gcgctcgtac ggccgcttgc ggttgaccac
     6241 ctcgcccagc agccgcacct ctccgccgtc atcgtccggc tgctcgaagc ccgccagcag
     6301 gcgcagagtg gtcgtctttc cgcagcccga ggggcccagc agggagaaga actcgccgcg
     6361 ctggatctcg aacgagacgt cgttcaccgc cttgacgtcg ccgaatgtct tggagacgcg
     6421 agagagttgg acgacaggag cggatgtggg cgggggcgag acgaccattt cgagggaacg
     6481 tactgcccgc tagaggggct gtcgagagcc gccgaccgct tcggccagcg cctcggccat
     6541 cgcgtcgaga ccctcgtcga gcagcgcgtc ctccgcggtg agcggcgcca gcacccggat
     6601 cacgttgccg taggtgccgg cggacaggag gatgacgccg cgccgcagcc cggccgcgag
     6661 gagccgtccc gccagtgcct tgtccggcgc gcgggagacg cgatcggcga cgagctccat
     6721 tcccaccatc gcgccaagac cccgcacgtc gccgatcgcg gggtagcagc cggcccagtc
     6781 ccggaacctc gtggcgatgc gctcgcccgc gcgggcggcg cgctccggaa tccgctcacg
     6841 ctccatcgcg tccagcaccg ccagggcggc ggcgcaggcc agcgggttac cgccgtaggt
     6901 cccgcccagc ccgccgggct ccgccgcctc catgacctcg gcccggcccg tcacggcggc
     6961 cagcggcagc cccccggcca gcgacttcgc ggtggtgatg atgtcgggca ccaggccgta
     7021 gtgctcgcag gcgaagaggg tcccggtgcg cccgaacccg gtctggatct cgtcggccac
     7081 gaacaggatc ccgtgcgccc gcgcgaaggc ggcgagcgag tggacgtact ccaccggtgc
     7141 gggcacgaag ccgccctccc ccagctcgag ctccatcacg atggcggcga cggagcccgg
     7201 gtcgaccagt gccgcgaact gccgatcgag ccagccggcc gctgccatgc agcagtcgcc
     7261 gcgcgcctcg ccgttccgcg cgactccctg gggacagcga tagcagtagg ggtaggggag
     7321 acggtagatc tccggggcga agggcccgaa ccccttcttg tagggaacca ccttcgaggt
     7381 aagggccatc gccaggttgg tgcggccgtg gaagccgtgc tcgaagcaga cgatcgcctg
     7441 ccggccggtg aaggcccgcg cgaccttgac cgcgttctcc accgcctcgg ctccgctgtt
     7501 gaccatgaag gtgcgcttct ggtggctccc cggcgtcagc cggttcaggc gctcggcgag
     7561 ctccacgtag ggctcgtagg tggagacagg gaagcagacg tgcgcgaagc gatcgagctg
     7621 gttccgcacc gcgtccacta caccggggtg gcggtgcccc gtgttcacca cgccaatgcc
     7681 tccggcgaag tcgatcatcc ggttgccgtc cacgtcggtc acgaccgcgc cttccgcgtg
     7741 cgcgacggcg atgggcgtga cggcggggac gccgcggggc accgcggccg cgcggcgcgc
     7801 caggagcgca cggctcttgg gtccggggat ctcggtccgt atctcgatga cgccggccat
     7861 gctcgtctct ggaaggcagg agcggaaggt ggagcagaaa gatacttgct ggcgggagca
     7921 accggacggg aggatgctgc cgatgctccg ccggcggagg gaccccggga tcgagacgga
     7981 gcctgaataa ctattcagcg cgggcccggg aggcgccgcc tagccctctg atcgtcaaag
     8041 acttatggca gacggcggag agtgcgggca aggccccaca actcccccga atgcccaccg
     8101 gggctggaca gcccgtgggg ggcgagagct atgatgccta tgcgccggcc ccaccggggc
     8161 gggtgtgttt gcatcctccg accaagcgga gggtccactc ctcgcagctg acgatctcct
     8221 tgagctgcga gcccctatat gcgggggggg cgaggaggca cagcctccag accgagtccc
     8281 gcgtcacccg aaaagaggag tttgtgaaaa ccctgctgtt gggcgccggc gcggtgggga
     8341 ccgtgtccgc cctcaagttc gtgcaagagg cgatgctcga gcagctcgtc atcgccgacg
     8401 cggtgtccgc ccgcgcctcc cttctggcgg accggctcaa tgatcctcgc gtgtcggcca
     8461 tcggcctcga cgccggcgat cgagcagcag tcgcccgcac cattcgcgag accggcagta
     8521 cgatcgtcct gaacgccgcc ctgcccgtca ccaatctcga ggtgatgcgc gcctgcctgg
     8581 acgcaggctg tgactacatc gacctggcga gcggtggcac cgatgcggac ggggtcccca
     8641 agctggagga ccagttcgcg ctggacggcg acttcagggc ggccggcaga atcgccctcc
     8701 tcgggatggg cgccgacccc ggcaccacca acgtttacgc cgcctacgcc gcgaagcacc
     8761 tgctggacac ggtgaccgag atccgggtcc gcgacggcga caactccgtc tgccaggggc
     8821 acgacgggtt cgtggcggcc ttcagtccct gggtcttcat cgacgagtgt ctctgcaagg
     8881 ccgtcagctg gcgcgacggc cggtaccacc tcgaggagcc gctcaccggg ttcgaaccgt
     8941 tcgagtttcc ggagcttggc atcctcaact gctactacgt ggaccacgag gaatcgaaga
     9001 ccctgccccg gttctttccg cgggcgcgga ccgtggactt caagctctgc atggacgacg
     9061 tcacggtcga gacgctgcgg gtcatgaagc ggctcgggct ctccggcaag aaccgcgtcc
     9121 aggtcggtga cgcctcgatc gcgccgcgcg atctggtcgt ctcactcctg ccccagccca
     9181 aggatctggc ggggcggatg cggggcaaga cctgcgtggg aacgctggtc cgcgggctca
     9241 agaacggcga gccgcgggcc tattacatct acaacgtctc ggaccacgag gccgcctacg
     9301 gcgagctcgg ggtgcaggcc accgcctacc agacgggcat tccaccggtg atcgcggccc
     9361 ggctcctcca tcaggggatc tggcgcggcg ccggtgtcat ggcgccggag cagttcgatc
     9421 cggacccctt cctcgagcgg ctgtcgaggg agggaatgcc gtggcacatc cgggacgact
     9481 cggcgcgcac ggggattccg cgcgtgcgcc cgttgaccac gcgggagacc gctgcggcat
     9541 agtggaaggc ggtaaggcgg tagggcggta gggtggtaga gaattaccgt cctgcccacc
     9601 agaaaccacc attaccgcct taccgcccta ccgccttacc gtctcaccgc cttccgccgt
     9661 ggtacattcc ggaagccccg caccgcaccg gaggagcgat gaccagcacg gcgacggcga
     9721 ccgcgaaggc ccgcaaggcc gaggtcgcca ggtatcagat gtacatcgac gggaagttcg
     9781 tggacgcggc ggacggcggg acgttcgacg tgtacgaccc gtccaccgag ggcgtgatcg
     9841 ccacctgtcc ggccggaagc gcggcggaca tggaccgggc ggcggtggcg gcgcaccggg
     9901 cgttctacga gggctggcgc gcggtgagcg cgcaggagcg cggccgggtg ctcttccgcc
     9961 tggccgagcg gatccgggcg cggcgcgacg agctggccca gctggagaca ctcaactcgg
    10021 gcaagccgat cgtggagtcc gagtacgaca tggacgatgc cgccacctgc ttcgagtact
    10081 acggcgggct cgcgaccaag atcaacggcg aggtcctccc cgtgcccgcg gaggcggtct
    10141 ccatggccat gcgggagccc atgggcgtcg ccggccagat catcccctgg aactacccgc
    10201 tactcatggc cgcgtggaag atcgccccgg ccatcgcagc gggatgcacg gtggtgctca
    10261 agccggccga gcagacgccg ctcaccattc tcaagctggc ggaggacttc gaggcggtcg
    10321 ggcttccgcc cggggtggtg aacatcgtga cgggcgacgg ccccggggcc ggcgcgccgc
    10381 tggtggcgca ccccaaggtg cggaagatcg ccttcaccgg gagcgcggag gtcggcaagc
    10441 tcatcatgcg gagcgccgcc gaccagctca agcgcgtctc cctggagctg ggcgggaagt
    10501 cgcccaacat cttcttcagc gacgccgact tcgagaacgc ggtggatggg gcgctgttcg
    10561 gcaccttcat caatcagggc gaggtgtgct ccgccggcag ccgggtcctg gtgcagcagg
    10621 acatctaccg aaagttcgtg gacgccgcgg ccgccaaggc gaagaccatc aggctcgggc
    10681 cgggcctgga ccgggagacc aagatgggcc cactggtgag cgccgagcag cgggatcggg
    10741 tcgccggcta tctcgacacc ggccggcagg aggcgaaggt cgcggtcggc ggtggaaggc
    10801 cgaagcagtt cgagaaggga tggtacgtcg agccgaccat tttctacgac gtggacaacg
    10861 gtgcccggat cgcccaggag gagatcttcg ggccggtgat gagcgtcatt cccttcaagg
    10921 acgaggccga cgcgatccgg atcgcgaacg cgtcccccta cggtctggcg gcggcggtgt
    10981 ggacccgcga catcttcaag gccttccggg tggtgaaagc cctcgaggcc ggcatcgtgt
    11041 gggtgaacca catgcagccc accttcgtcg aggccccctg gggcgggtac aagatgagcg
    11101 ggttcggccg ggagctgggc cactggggag tggaggagta cctggagacg aagcaggtgt
    11161 tcatcaactt ggacgagaag ccgatcgggt gg
//
LOCUS       DASUYN010000348         3156 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1217128, whole genome shotgun sequence.
ACCESSION   DASUYN010000348 DASUYN010000000
VERSION     DASUYN010000348.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3156)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3156)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3156
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1217128"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..721
                     /locus_tag="VF061_06845"
     CDS             <1..721
                     /locus_tag="VF061_06845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669258.1"
                     /translation="SAAAAVASVVLRVPSLTPGPVPRRAPRRPEDAPGRIRLAVPRDP
                     TIDHVVLFEHTPQQGPAPEPARAGQAELLRVRNRRELGPGAALRLRLPDGTVLGSSAR
                     PLGPPPAGTEGWELTVDAAGAAGRDTMIWAATLTTDGIPSPLGGPWRLSLPKADLVPP
                     VLAVSGTGATLQFSWTLSEPLVTSVWLEATRDGIWERASSTRRPAETSLALRRPAESR
                     EYRLVGAAQDGRRVPSNSVVA"
     gene            731..>3156
                     /locus_tag="VF061_06850"
     CDS             731..>3156
                     /locus_tag="VF061_06850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669259.1"
                     /translation="MPAFRRPFDPSLVAVTTVEAALPDRRGDAGPTRFARYPRLPIRF
                     LVATPAPGPLELSWPTAGAVRLVELPSAAAAALGVNELVELSPLPFVASSVFRALGPG
                     LPTFYLGYVGAPLPEHDSAVRADDPPMTVTRAVLGCVFQDRMTLEPWAWVDLIGDALG
                     AALPAEAAGWRTLAALFDGGRTLQVRDAAGRPATNEVFDLRFLDASSAVVRQATMVSD
                     AAGALGPQALPAPGEARVEIAWRAAPGAGDEALPVLALYEPSLARPDDDSTRSYPGSS
                     LVSLAATARGAHLQLLDLARWYSPQALSPGHPWPARFRPRSRVEPLVDGLATYTRLVA
                     DMRRASGIHLAGWAFFDFPMRPYDPGSSLLNLMDSIGRDRFRVLVVQSFLPKVGAIDT
                     LGTDALVTLFMAMCAAQPLIATRTLGAFNDWGMLTWTAATVAALVALVLADVDTAVEA
                     KLREAAEFTKEPMRRALYEVSDDPAAGRPPCAFPTAHPVTIPDNPIANDFDLPGFGPL
                     SGVQAHFGTFHQKVQVLAIPSGTGSTYVGYLGGIDINSNRVDGPGHHASRPRGPETLG
                     PPHVEPYHDVHARVTGPAVLDVVGLFHERYRLALDAPPTGVVQDPLYQPPATPPSPAF
                     MPPADVPAPAGQHLVQIAQTSFEPGPGGTGLPWASQGAAPIRETFERAIRNAREYIYI
                     EDQYFTLDNGLVALLRTAADHCRRLVITIPASTPDQVFGDQRRLATFERLSGATGGAG
                     GWGDRMVVGTPFRRSVLPPAERFASIGRGNLTDEVVSATASKIYVGPPPRVPPTVPYF
                     FWVAGELMYAT"
BASE COUNT          363 a         1204 c         1137 g          452 t
ORIGIN      
        1 ctcggccgca gcggccgtcg ccagcgtcgt gctgcgggta ccctcactca cgcccggccc
       61 ggtgccacgg cgagctcccc ggcggccgga ggacgcgccc gggcggatcc gcctcgcggt
      121 gccgcgcgac ccgaccatcg accatgtggt gctcttcgag catacgcccc agcagggacc
      181 ggctccggag ccggcacgcg ccggccaagc ggagctgctg cgggtgcgga accgccgcga
      241 gctcggcccg ggagcggcgc tccgtctccg cctgccggac ggcacggtgc tcggctcctc
      301 cgctcgtccg ctcggcccgc cgcccgccgg cacggagggc tgggagctca ccgtggacgc
      361 cgcgggtgcg gcgggccgcg acacgatgat ctgggctgcc acgctcacca ccgacgggat
      421 tccctcgcca ctgggcgggc cctggcggct gagccttccg aaggccgatc tcgtcccgcc
      481 ggtcctggcg gtgtccggca cgggggcgac actccagttc tcctggacgc tgtccgagcc
      541 gctggtgacg tcggtctggc tggaggcgac gcgcgacggc atctgggagc gggcgtcgtc
      601 cacgcgtcgc ccggccgaga cgtcgctcgc actgcgccgg ccggcggagt cccgcgagta
      661 ccggctcgtg ggcgccgcgc aggacgggcg gcgggttccg agcaactcgg tcgtggcctg
      721 aggagggacg atgcctgcat tccgccgtcc attcgacccc tcgctcgtgg ccgtgaccac
      781 ggtcgaggcc gcgctgcccg accggcgcgg cgacgcgggc cccacaaggt tcgcgcgcta
      841 tccgcggctg cccatccgct tcctcgtcgc gacgcccgca ccggggcccc tcgagctgtc
      901 ctggccgacc gcgggagccg tgcgcctggt cgagctgccg agcgcggcgg cggcggcgct
      961 gggcgtgaac gagctggtgg agctctcgcc gctgcccttc gtggcgtcga gtgtcttccg
     1021 cgcgctgggg ccggggctcc cgacgttcta cctcggctac gtgggggcgc cgctccccga
     1081 gcacgactcg gcggtgcgcg ccgatgatcc cccgatgacc gtgacgcggg cggtcctggg
     1141 ctgcgtcttc caggaccgga tgacgctcga gccctgggcg tgggtcgacc tcatcggtga
     1201 cgccctcggc gccgcgctcc cagccgaggc ggcgggatgg cgcacgctcg ccgcactctt
     1261 cgacggggga cgcaccctcc aggtgcgcga cgccgccggc cggccggcga cgaacgaggt
     1321 gttcgatctc cgcttcctcg acgcctcgag cgcggtcgtg cgtcaggcca cgatggtctc
     1381 cgacgccgcg ggggccctcg gccctcaggc gctgccggcg ccgggagaag cgcgggtcga
     1441 gatcgcctgg cgcgcggcgc cgggcgccgg cgacgaggcg ctgccggtgc tcgcgctcta
     1501 tgagccgtcg ctggcgcgcc ccgacgacga ctcgacgcgc tcctaccccg gctcgtcact
     1561 cgtctcgctg gccgctacgg cgcgaggcgc gcatctccag ctcctcgacc tcgcgcgctg
     1621 gtactcgccg caggcgctct cgccggggca cccctggccg gcgcgcttcc gaccgcggag
     1681 ccgggtggag ccgctggtcg acggcctggc cacctacacc cggctggtgg cagacatgcg
     1741 tcgcgcctcc ggcatccacc tcgccggctg ggcgttcttc gacttcccca tgcggcccta
     1801 cgacccgggc tcgtcgctgc tgaacctgat ggactcgatc gggcgcgacc gcttccgggt
     1861 gctggtggtg cagtccttcc ttccgaaggt gggggcgatc gatacgctgg ggaccgatgc
     1921 cctcgtcacg ctcttcatgg cgatgtgcgc cgcccagccg ctcatcgcga cccggacgct
     1981 gggcgcgttc aacgattggg ggatgctgac ctggaccgcc gcgacggtgg cggcgctggt
     2041 ggcgctggtg ctggccgatg tcgataccgc ggtcgaggcg aagctccgcg aggcggcgga
     2101 gttcaccaag gagccgatgc gccgcgcgct ctacgaggtg tccgacgacc ccgcggcggg
     2161 caggccaccc tgtgcctttc ccaccgcgca tccggtcacc atcccggaca atccgatcgc
     2221 gaacgacttc gacctgccgg ggttcggacc gctgagcggc gtccaggcgc acttcggcac
     2281 gttccaccag aaggtgcagg tgctggcgat cccgtcgggc acggggtcca cctacgtggg
     2341 atacctcggg ggcatcgaca tcaactccaa ccgggtggac ggccccggcc atcacgcctc
     2401 gcgcccacgc ggaccggaga ccctgggccc gccccacgtc gagccctatc acgacgtgca
     2461 cgcgcgcgtt accgggccgg ccgtgctcga cgtggtgggc ctcttccacg aacgctaccg
     2521 gctcgccctc gacgcgccgc cgaccggcgt ggtgcaggat ccgctctacc agccacccgc
     2581 caccccgccg tcgcccgcgt tcatgccgcc ggccgacgtg ccggcaccgg cggggcagca
     2641 cctggtgcag atcgcgcaga cctcgttcga gccggggccg ggcggcaccg gcttgccgtg
     2701 ggcgtcccag ggggccgcgc cgatccggga gaccttcgag cgggccatcc gcaacgcgcg
     2761 cgagtacatc tacatcgagg atcagtactt caccctcgac aacggtctcg tcgccctcct
     2821 gcggaccgcg gcggaccact gccggcgcct ggtgatcacg atacccgcga gcacgcccga
     2881 tcaggtcttc ggcgaccagc gccggctcgc gacgttcgag cgtctctcgg gtgcgaccgg
     2941 aggggccggc ggctggggcg accggatggt cgtgggcacc ccgttccgcc gctcggtgct
     3001 gccgccggcg gagcggttcg cctccatcgg gcggggcaac ctgacggatg aggtcgtctc
     3061 ggcgaccgcg tcgaagatct atgtcggccc cccgccgcgc gtgccgccga cggtgcccta
     3121 cttcttctgg gtggcgggcg agctgatgta cgccac
//
LOCUS       DASUYN010000349         3865 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_112619, whole genome shotgun sequence.
ACCESSION   DASUYN010000349 DASUYN010000000
VERSION     DASUYN010000349.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3865)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3865)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3865
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_112619"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(47..820)
                     /locus_tag="VF061_06855"
     CDS             complement(47..820)
                     /locus_tag="VF061_06855"
                     /inference="COORDINATES: protein motif:HMM:NF013106.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008955 - peptidoglycan
                     glycosyltransferase activity [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic peptidoglycan transglycosylase"
                     /protein_id="HEX6669260.1"
                     /translation="MRRTAEARGDRLRSYRPLPLDSIAPAMIEAAVTAEDARFWTHSG
                     IDWHEVRHALGYRRGGFEWSSARDRAALWRALGSVPARKEALRGASTITQQVAKNLYL
                     SPSRSPLRKLKETVTAYRLELALPKRRILELYLNVAELGEGIWGVEAASRRYYRKPAG
                     RLSPSQAAALAATLPFPRSSNPAYRPVRMRRRQELILRRMRGERIEVPPVAEEPIPQP
                     GDSIMWTPGMDSLLDSLRAPVETLYNRQSTSLSGITRVR"
     gene            complement(945..1844)
                     /locus_tag="VF061_06860"
     CDS             complement(945..1844)
                     /locus_tag="VF061_06860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669261.1"
                     /translation="MRRSAIPIALLAALFLGACSSTTASGGNPGAPAPEPIDPAAPPP
                     AEEGRGPAVTYRPVSGAAYRLEHRDSLVFQYQGGASQTQTRDRVALVHLTIAEAPARG
                     SYLVTVRLDSLEALESGNPVPADSVAAALGTTWSGTLSSVGTLSELKPDRAGTLTAEL
                     AGHLRLLFPALPEGGVREGMQWTDSASYPLVSDAFTGNEQAVTVYRASDKEEVAGQEA
                     IPLETSSKYSRTGNRVQGEQELEMTASGTRSGVHRLSTDGVLVSAQGTDTGEMTVSVP
                     AVGQTVPITRSSTYAVSSLSPDQ"
     gene            complement(1841..2626)
                     /locus_tag="VF061_06865"
     CDS             complement(1841..2626)
                     /locus_tag="VF061_06865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669262.1"
                     /translation="MSTHLGGLGAMAAVTLALPALRLAPVTTKYRVDQSLTQEVDATA
                     EGQGKQTLKFNTSTFVTVTLNDSAGGRTMRVVIDSVKGDSATPIPVAVLDSARGGEFR
                     AFVTKAGKPSPLTPTGTSPAAAQVQGLLADFFPWVRAGIKVGDAWVDTTVNTTGAGSD
                     TVTVRRITNFKAAAAETRGTVPAVRITMDHTSDVTGAQPTPQGPAKIEGKGGGSGTYY
                     VSADGRYLGGEWQLHSSLSLSGAFAKQPLPITVTQTTKVTAVR"
     gene            complement(2741..3174)
                     /gene="rnpB"
                     /locus_tag="VF061_06870"
     ncRNA           complement(2741..3174)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="VF061_06870"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(3214..>3865)
                     /locus_tag="VF061_06875"
     CDS             complement(3214..>3865)
                     /locus_tag="VF061_06875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669263.1"
                     /translation="WDESWRRVVLGELYAGVGVPASSLRQVWQSAAEAGRMVAADSRK
                     HLVHSGASAAIGLFTGPSADSSALVEYRAMTGDQLAPEVQALLALSRGDSSGARRMLA
                     QPDTVPRGMPKWTAGLYTRPLAAQAWFLLGDYQRTLHLLQDFEPQALKTGGFDSRWGM
                     LGRVRLLRAAAYEQLGRRSEALEEYRQVLAQWKTADEVLKPFIRQAEQGLARLGEA"
BASE COUNT          493 a         1424 c         1350 g          598 t
ORIGIN      
        1 agcgggcggc cacttgcgag ccggtggggt ggaacgatcc ggccagctat ctgaccctgg
       61 tgatgccgct caggctcgtg gactgacggt tgtatagcgt ctccaccggc gcccggaggg
      121 agtcgagcag cgagtccatc cccggcgtcc acatgatgct gtcccccggt tgcgggatcg
      181 gctcttccgc taccggcggc acctcgatcc gctcgccgcg catccgcctg agaatcagct
      241 cctgccggcg ccgcatccgc actggccggt aggccgggtt cgagctgcgg ggaaacggga
      301 gcgtggccgc gagcgcggcg gcctggctcg gactgaggcg ccccgcgggc ttccggtagt
      361 agcgccggct cgccgcctcc actccccaga tcccttcccc caactcggcg acgttgaggt
      421 acagctccag gatgcgccgc ttcggcagcg cgagctccag gcgatacgcg gtcaccgtct
      481 ccttcagctt ccggagcggg ctgcgcgagg gtgagagata gaggttcttg gccacctgct
      541 gggtgatggt gctggccccg cggagcgcct ccttccgcgc cgggacgctc ccgagcgccc
      601 gccacagggc cgcgcggtcc cgggccgagc tccactcgaa tccgccgcgc cggtagccga
      661 gcgcgtgtcg cacctcgtgc cagtcaatgc ccgagtgggt ccagaaccgc gcgtcctccg
      721 ccgtcaccgc cgcctcgatc atcgccggcg cgatcgagtc cagtggcagg ggccgatagc
      781 tccgcagccg gtccccccgc gcctccgccg tccggcgcat gaactccgtc tccgccggcc
      841 agtgggtgcg ataccagagc ggcggcggcc agacggcgag cagccagagg agaaacaggc
      901 ccagcggagc gaggatcagc ccgagccgcc cccaggcggg gcggctactg gtccggcgag
      961 agcgagctga cggcgtaggt gctcgagcgg gtgatgggaa cggtctgccc gaccgcgggc
     1021 acggagaccg tcatctcacc ggtgtcggtg ccctgcgccg agaccaggac cccgtcggtg
     1081 gagagtcggt gcacgccgct gcgggtgccc gaggcggtca tctccagctc ctgctcgccc
     1141 tggacccggt tgcccgtgcg gctgtacttg ctgctcgttt ccagcggaat cgcctcttgt
     1201 ccggcgacct cctccttgtc cgacgcgcga tagaccgtga ccgcctgctc gttgccggtg
     1261 aacgcgtccg agaccagggg atagctggcg gagtcggtcc actgcatccc ttcgcgcacg
     1321 ccaccctccg ggagcgcggg gaagaggagc ctcaagtgtc cggcgagctc cgccgtgagc
     1381 gtgcccgcgc ggtcgggctt gagctcggag agggtgccca cggacgacag cgtgccgctc
     1441 caggtcgtgc ccagcgccgc cgccaccgag tcggccggca ccgggttgcc gctctccagg
     1501 gcctcgagcg aatcgagcct gacggtgacc aggtagctgc cccgtgccgg cgcctccgcg
     1561 atggtgagat gcaccagcgc gactcgatcg cgggtctggg tctgactcgc gccgccctgg
     1621 tactggaaga ccaggctgtc acggtgctcc agccggtacg ccgccccgct caccggacgg
     1681 tacgtcactg cggggccgcg tccttcctcc gccggcggcg gagcagcggg gtcgatcggc
     1741 tccggagccg gggccccggg gttgccgccg gaggccgtgg tcgagctgca ggcgcccagg
     1801 aacagcgccg cgagcagggc aatcgggatc gcgctccgtc tcatcgtacc gccgtgacct
     1861 tcgtcgtctg ggtgaccgtg atcgggagcg gctgcttggc gaatgccccg gagaggctca
     1921 gcgacgaatg cagctgccat tccccgccga ggtagcggcc gtcggcgctc acgtagtagg
     1981 tgccgctgcc gccgcccttc ccctcgatct tcgccggccc ctgcggcgtc ggctgggccc
     2041 cggtcacatc cgaggtgtgg tccatcgtga ttcgcaccgc cggtacggtg ccgcgggtct
     2101 cggcggcggc ggccttgaag ttggtgatgc gccggacggt gaccgtgtcg ctgccggcgc
     2161 cggtcgtgtt cacggtggtg tccacccacg cgtcgcccac cttgatgccg gcgcggaccc
     2221 aggggaagaa gtcggcgagc agtccctgca cctgcgcggc cgcgggcgag gtgccggtcg
     2281 gcgtgagcgg cgacggcttc ccggccttgg tgacgaaggc gcggaactcg ccgccccggg
     2341 cgctgtccag caccgcgacg gggatcgggg tggcgctgtc gcccttcacc gaatcgatga
     2401 ccacccgcat cgtgcggccg ccggcgctgt cgttcagcgt caccgtcacg aaggtgctgg
     2461 tgttgaactt gagcgtctgc ttgccctgcc cctcggcggt ggcgtccacc tcctgggtca
     2521 ggctctggtc cacccggtac ttggtggtga ccggcgcgag ccggagcgcc ggcaacgcga
     2581 gcgttacggc ggccatcgcg cccaagccac cgaggtgagt cgacatcgca acctccctgg
     2641 agttcgccgg tccaacgcgc tggaaaaagg taaaccggcg cccccgcttc cggcacggcg
     2701 cacacgactc ggccccccgg gccttagcgt ccggggggcc gatgctggtc gagccgtaag
     2761 ccgagttctg tttctcccgc cgccgggacg agcccgtcgt cagggagatg gtcatctgtc
     2821 tgggatggcc gtcgccggcc acctctagca gcctacccgc ggctgtcccc tcgtctactt
     2881 ggcgttagcc tcgcggactc gggctcggtg cgggccgcac ctcgccgccg attttgccgt
     2941 gctccgactg ggggttgccg tgccgccgct gttaccagcg gcgcggtggg ctcttacccc
     3001 accgtttcac ccttacccac ctgccccctc gcgagggccg gcgggcggtc tgctctctgt
     3061 tgccctgtcc gtcgccttcc ggcgcccagg cgttacctgg cagtctgccc tgtggagctc
     3121 ggactttcct cgaggtgacc ctgcggccac cccgcgacca ccgcactcgg ccagcgtgac
     3181 aaatgtaatc gggagaacgt cttgcggcta cggtcaggcc tcgcctagcc gggccaggcc
     3241 ctgctccgcc tggcggatga agggcttgag cacctcgtcc gcggtcttcc actgggccag
     3301 cacctgccgg tactcctcca gcgcctcgga gcgccggccc agctgctcgt aggcggcggc
     3361 gcggagcagc cgcacccggc cgagcatgcc ccagcgggag tcgaagccgc cggtcttgag
     3421 cgcctggggc tcgaagtcct gcagcaggtg cagggtccgc tggtagtcgc ccagcagaaa
     3481 ccacgcttgc gccgccagcg ggcgggtgta gaggccggcc gtccacttcg gcattcccct
     3541 gggcaccgtg tccggctgcg ccagcatccg gcgggccccg ctggaatccc cccggctcag
     3601 cgcgagcagg gcctggacct cgggcgccag ctgatccccc gtcatcgccc gatactcgac
     3661 cagggcggag ctgtccgcgc tgggaccggt gaacaggccg atcgccgcgg acgccccgct
     3721 gtgcaccagg tgcttccgcg agtccgccgc caccatgcgg cccgcctcgg cggcgctctg
     3781 ccagacctgg cgcagcgagg acgcggggac gcccacgccg gcgtagagct ctcccagcac
     3841 cacccgccgc cagctttcgt cccag
//
LOCUS       DASUYN010000350         4791 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1436905, whole genome shotgun sequence.
ACCESSION   DASUYN010000350 DASUYN010000000
VERSION     DASUYN010000350.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4791)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4791)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4791
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1436905"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1332
                     /gene="tilS"
                     /locus_tag="VF061_06880"
     CDS             <1..1332
                     /gene="tilS"
                     /locus_tag="VF061_06880"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR02432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016879 - ligase activity, forming
                     carbon-nitrogen bonds [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HEX6669264.1"
                     /translation="AFLRMALTDEFRAHLASLALPSGPALVAVSGGLDSVVLLDLLHR
                     TIGDGRRLIVAHADHGIHPHSAGVASGVAAFAAGLGLDCEVGRLGLGAGTGETSARSA
                     RYTWLFALRERLGAALVFTAHHADDQAETLLMRALEGSGPAGLAGMRAVSGVLVRPLL
                     RFRREELARYARASGLPVWVDPANSDSTHLRSWLRCDLLPLIRKRLPQVDDRLRRLGA
                     QAARERAALEAVLDHLPGLDPRGEDGGISVAAAPIAAYDSPLAQTVIIAAARRAGLPM
                     GPGRAARAIALAVSGDSGREVPLGGGWRAELSFGRLRIVPSSDWREHGVLAVAGRRGQ
                     GLWGEWRISWRPDTAPERQDRSSRTAWFSGDGLVVRSWVRGEKVRPLAGAGRRPVVRC
                     FQDARVPRRSRAEWPVLAAPNLVVWIPGVCRSDALLPPAGAEALRVDVEHA"
     gene            1316..1870
                     /gene="hpt"
                     /locus_tag="VF061_06885"
     CDS             1316..1870
                     /gene="hpt"
                     /locus_tag="VF061_06885"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006166 - purine ribonucleoside salvage
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine phosphoribosyltransferase"
                     /protein_id="HEX6669265.1"
                     /translation="MLSTPEVLRRTGGKPVKSIVYDEETIAARVRELGAEITAAYPEG
                     ELLVLGLLKGSFIFLSDLVRTIERPVQVDFLVASSYGDGKVSSGAVRLLYDPETRLEG
                     KHILLVEDIIDTGKTLQRLMALLTQRKPGSLAICALLDKQLAAVPRPEPKFIGFKAPP
                     AFLVGYGLDHAENYRHLPFIADLE"
     gene            1871..3856
                     /gene="ftsH"
                     /locus_tag="VF061_06890"
     CDS             1871..3856
                     /gene="ftsH"
                     /locus_tag="VF061_06890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HEX6669266.1"
                     /translation="MADRLPSRPPRTNWGNLSKNLALWLLVGLLALALFQMMSRQRNP
                     TQEFSYTEFSRQLDQGNIARVEVFDGKRLEGDFRAPVTQDGRTAKSFTVLLPVANSES
                     FIKRLEDAGVPILAKEPKGGITAIIIAALPWIVILGLWFFLLRQLQAGGSRAFAFGKS
                     KAKLLAGDTPKVTFADVAGADEAKVELQEIIEFLKDPQKFTRLGGRLPKGALLVGPPG
                     TGKTLLAKAVAGEAGRPFFSMSGSDFVEMFVGVGASRVRDLFEQGKSHAPCIIFIDEI
                     DAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFESNDGVILVAATNRPDVLDPALLRPG
                     RFDRQIVVDAPDVRGREGILRVHTRKIPLASDVRLEVIAKGTPGMAGADLANLVNEAA
                     VLAARRNKTLVDMVDFEDAKDKVMLGVERRSLVLTEDERKLTAYHEAGHAIVALKIPG
                     SDPVHKVTIVPRGRALGLTASLPEVDRHNYSKDWLIGSLAMFFGGRVAEEIIFGADKV
                     TTGAGNDIERATALARRMVTQFGMSEVIGPLAVGDKEQEIFLGREFAQRREISERTAQ
                     KVDDEVKRLVDEAYARATQIITDHRELLDRIALALLDRETSDREDLDHLVKNLPLPPR
                     NLPPDTAAAANPPASKPGPTPARAPILGAPPAEPAGA"
     gene            3853..>4791
                     /gene="folP"
                     /locus_tag="VF061_06895"
     CDS             3853..>4791
                     /gene="folP"
                     /locus_tag="VF061_06895"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR01496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004156 - dihydropteroate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HEX6669267.1"
                     /translation="MNVTPLALHSPGAVRGALRSHGWEDGLARTSTSGILPLAFHLTG
                     LDQGALEALVRFGGGLGLEVVTGDDWAILAGSRSRMSAFARPWTAPEPLADVALRVGL
                     AMPADPSLSWRTARGSVPLDRSVILGILNVTPDSFSDGGRFTRTDAALAHAEALLAEG
                     AIVIDVGGESTRPGRTEPVSAAEERRRVLPLIEALARSHPDLPISVDTVKSEVARAAL
                     EAGAAIVNDVTAFRLDPAMAGAAAAAGAGVILMHSRGNLLEIASYVHADYRGDVVGGV
                     LAELRESLSAATAAGIGADAIVLDPGLGFSKTPEQSV"
BASE COUNT          666 a         1705 c         1717 g          703 t
ORIGIN      
        1 gctttcctca ggatggctct cacggacgag ttccgcgccc acctcgcctc cctggcgctg
       61 ccgagcggcc cggcgctcgt cgccgtctcc ggcggcctcg attccgtcgt cctcctcgac
      121 ctgctgcatc gcaccatcgg cgacgggcgc cggctcatcg tggcgcacgc cgatcacggc
      181 attcatccgc acagcgcggg cgtggcctcc ggggtggccg ccttcgcggc cgggctcggg
      241 ctcgactgcg aggtcggtcg acttggcctc ggcgccggca ccggggagac gtcggccagg
      301 tcggcgcggt acacctggct cttcgccctg cgggagcggc tgggagcggc actcgtcttc
      361 accgcccacc atgccgacga ccaggccgag acgctgctca tgcgcgccct tgaagggtcg
      421 ggcccggccg gactcgcggg aatgcgcgcc gtgagcggcg tgctggtgcg gccgctgctg
      481 cgctttcgac gggaggagct cgcccgctac gcccgggcga gcgggctgcc ggtctgggtc
      541 gaccccgcca acagcgactc gacccatctg cgctcctggc tccgctgcga cctgctcccc
      601 ctgatccgga agcgcctgcc ccaggtggac gatcgcctgc ggcgcctcgg cgctcaggcg
      661 gcccgcgagc gcgccgcgct ggaggccgtg ctcgaccacc tgccgggact cgatccgaga
      721 ggggaggacg gtggcatttc cgttgctgct gcccccatcg cggcctatga ttcacccctg
      781 gctcagaccg tcatcatcgc ggccgcccgg cgggccggtc tccccatggg tccggggcgt
      841 gcggcccggg ctatcgccct ggccgtctcc ggtgacagcg gacgggaagt gcccctcggt
      901 ggtgggtggc gcgcggagct gtcgttcggc cggctgcgga tcgtcccctc gagcgattgg
      961 cgggagcacg gggtgctggc ggtggcgggc cgacgggggc aggggctgtg gggcgagtgg
     1021 cggatcagct ggcgaccgga caccgcaccg gagcgccagg accgctcgtc ccgcaccgcc
     1081 tggttcagcg gcgacgggct ggtggtgcgg tcgtgggtgc gcggtgagaa agtgcggccc
     1141 ctcgccggcg ccggacgacg gcccgtggtg cgctgcttcc aggacgcccg ggtcccgcgg
     1201 aggagccggg cggagtggcc ggtgctcgcc gcgcccaatc tggtggtctg gatcccgggc
     1261 gtctgccgct cggatgcgct gcttccaccc gcaggtgcgg aggcgctacg tgtcgatgtt
     1321 gagcacgcct gaggtgctgc gccggaccgg cggcaagccg gtgaagtcca tcgtgtacga
     1381 cgaggagacc atcgccgccc gggtccgcga gctgggggcg gagatcaccg ccgcgtaccc
     1441 cgagggggag ctcctcgtcc tcggcctgct caagggcagc ttcatcttcc tgagcgacct
     1501 ggtccggacc atcgagcggc cggtgcaggt ggacttcctg gtggcgagct cctacgggga
     1561 cggcaaggtc tcgagcgggg cggtccgcct cctgtacgac ccggagaccc ggctggaggg
     1621 caaacacatc ctcctggtcg aggatataat tgatacgggc aagacccttc agcggctcat
     1681 ggccctgctg acccagcgga agccgggcag cctggccatc tgcgccctgc tggacaagca
     1741 gctggcggcg gtgccgcggc cggagccgaa attcatcggc ttcaaggcac cgccggcgtt
     1801 tctggtcgga tacggactcg accacgccga gaactaccga catctcccgt tcatcgcgga
     1861 cttggaataa atggcagacc gacttccctc ccggcccccg cgcaccaact ggggcaacct
     1921 gagcaagaac ctggctctct ggctgctcgt gggcctgctg gcgctcgccc tgttccagat
     1981 gatgagccgc cagcggaacc cgacccagga gttctcctac accgagttca gccggcagct
     2041 cgaccagggc aacatcgccc gggtcgaggt gttcgacggc aagcggctgg agggcgactt
     2101 ccgggccccg gtgacccagg acgggcgcac ggccaagagc ttcaccgtgc tgctcccggt
     2161 ggccaacagc gagtccttca tcaagcggct ggaggacgcc ggtgtcccca tcctggcgaa
     2221 ggagcccaag ggcgggatca ccgcgatcat catcgcggcg ctcccctgga tcgtgatcct
     2281 ggggctctgg ttcttcctgt tgcgccagct ccaggccggc ggcagccgcg cgttcgcctt
     2341 cgggaagtcc aaggccaagc tgctcgcggg agacaccccc aaggtcacct tcgcggacgt
     2401 cgccggcgcg gacgaggcca aggtcgagct ccaggagatc atcgagttcc tcaaggatcc
     2461 ccagaagttc acccggctgg gcgggcgact ccccaagggg gcgctgctgg tgggaccgcc
     2521 gggcaccggc aagaccctcc tggccaaggc cgtggcgggt gaagccgggc gcccgttctt
     2581 ctcgatgtcg ggatcggact tcgtggagat gttcgtcggc gtcggcgcca gccgggtgcg
     2641 cgacctgttc gagcagggaa agtctcacgc gccctgcatc atcttcatcg acgagatcga
     2701 tgcggtgggc cgccaccgcg gcgcgggtct cggcggcggt cacgacgagc gggagcagac
     2761 cctcaaccag ctgctggtcg agatggacgg gttcgagtcc aacgacggcg tgatcctcgt
     2821 cgccgccacc aaccgccccg acgtgctcga ccccgcgctg ctccggcccg gccggttcga
     2881 ccggcagatc gtggtggatg cgcccgacgt gcgcgggcgc gaggggatcc tccgggtgca
     2941 cacccggaag atcccgctcg cttccgacgt gcgactcgag gtcatcgcca agggcacccc
     3001 gggcatggcg ggcgccgacc tcgccaacct ggtcaacgag gcggccgtgc tggccgcccg
     3061 gcgcaacaag acactggtgg acatggtgga cttcgaggac gccaaggaca aggtgatgct
     3121 cggcgtcgag cggcggagcc tggtcctcac cgaggacgag cggaagctca cggcgtacca
     3181 cgaggcgggc cacgcgatcg tggcgctcaa gattccgggc agcgatccgg tgcacaaggt
     3241 caccatcgtg cctcgcggcc gggcgctcgg cctcaccgcc tcgttgcccg aggtggaccg
     3301 ccacaactac agcaaggact ggctgatcgg cagcctcgcg atgttcttcg gcggccgggt
     3361 ggccgaggag atcatcttcg gcgccgacaa ggtgaccacc ggggcgggga acgacatcga
     3421 gcgggccacc gcgctggcgc ggcgcatggt cacccagttc ggcatgagcg aggtgatcgg
     3481 cccgctggcc gtgggcgaca aggagcagga gatcttcctc ggccgggagt tcgcccagcg
     3541 gcgggagatt tcggaacgca ccgcccagaa ggtggacgac gaggtgaagc ggctggtgga
     3601 cgaggcttat gcccgggcca cccagatcat caccgaccac cgggagctgc tcgatcggat
     3661 cgcgctggcg ctgctggacc gcgagaccag cgaccgggag gatctggacc atctggtcaa
     3721 gaacctcccg ctgcccccgc ggaatctgcc gccggacacc gcggcggccg ccaacccgcc
     3781 cgcgagcaag ccgggcccga cgccggcgcg ggcgcccatc ctcggagcgc cgccggccga
     3841 accagccggc gcgtgaatgt cacgccgctg gcgctccact cgccgggggc ggtgcgcggt
     3901 gcgctccgtt cccacgggtg ggaggacggc ctcgcccgaa cctcgacctc gggcattctc
     3961 cccctcgcct ttcatctgac cggactggac cagggcgccc tcgaggccct ggtccgcttc
     4021 ggtggcggcc tgggtctcga ggtcgtcacc ggcgacgact gggccatcct cgccggcagc
     4081 cgctcccgca tgagcgcctt tgcccggccg tggaccgcgc ccgagccgct ggccgacgtg
     4141 gcgcttcgag tgggcctcgc gatgccggcg gatccgagtc tctcctggcg caccgcccgc
     4201 ggctccgtcc cgctcgaccg ttccgtcatc ctcgggatcc tcaacgtcac accggacagc
     4261 ttcagcgacg gtggccggtt cacccgaacc gacgccgcgc tcgcgcacgc ggaggcgttg
     4321 ctcgccgaag gcgcgatcgt gatcgatgtc ggcggggagt cgacccggcc ggggcgcacc
     4381 gaaccggtct ctgccgccga ggagcggcgg cgcgtcctcc cgttaatcga agcgctggcg
     4441 cggagccatc ccgacctgcc gatctcggtg gacacggtga agtccgaggt tgcccgcgcg
     4501 gcgctcgagg ccggtgccgc gatcgtgaac gacgtgaccg cgttccgact cgaccccgcg
     4561 atggcgggcg cggccgccgc ggccggtgcc ggcgtcatcc tcatgcactc gcgcggcaac
     4621 ctgctggaga tcgcctccta cgtccatgcc gactaccggg gcgacgtagt gggcggggtg
     4681 ctcgccgagc tgcgggagtc actgtccgcc gccaccgcgg cggggatcgg cgccgatgcc
     4741 atcgtgctcg atcccggcct gggcttctcg aagacgccgg agcagagcgt c
//
LOCUS       DASUYN010000351         2092 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1878222, whole genome shotgun sequence.
ACCESSION   DASUYN010000351 DASUYN010000000
VERSION     DASUYN010000351.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2092
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1878222"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..671)
                     /locus_tag="VF061_06900"
     CDS             complement(<1..671)
                     /locus_tag="VF061_06900"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: protein motif:HMM:NF006416.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HEX6669268.1"
                     /translation="MSAKIPVCILGATGTVGQKFVRLLADHPWFEIATVAASSTSAGR
                     RYGDVVRWREQVDLPPRIADLTVAECAPPLPGAVAFSALDAEVAGPIEQAFAAAGAYV
                     VTNTRTHRMEADVPLLIPEANADHLVLIDRQREARGWSGAILANPNCSTAALALALAP
                     LHRAFQVERLFVSTMQAVSGAGYPGVPSLDALGNVIPYIGGEEEKIERETRKILGTLG
                     PGGVEP"
     gene            complement(668..1672)
                     /locus_tag="VF061_06905"
     CDS             complement(668..1672)
                     /locus_tag="VF061_06905"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX6669269.1"
                     /translation="MDPLELTRALVALETPTGSEQPAIDLLEGVLRRAGYHTVRQPVS
                     RGRDNLYAYREEPELVFSTHVDTVPPQLPVVEDEVAIRGRGTCDAKGLAAAMVAAAER
                     LAAAGERRVGLLFLVGEENGSDGARAAADFGPRGRFLINGEPTENRLSVGQKGTLRVD
                     LTATGRAAHSAYPEEGTSAIAALLDTIERIRRLPLPHDPLLGPSTLNLGLIAGGVAPN
                     VIPPHASAQLLVRTVEPTGGLKAAIREQLAPGVSAEFPVELPFHKAGGAPPGWDTVVV
                     SYASDLPFLSAWGEGYQMGPGSIRVAHTADEHILKAELLHGVDLYVRLAADLLSREAS
                     "
     gene            1888..>2092
                     /locus_tag="VF061_06910"
     CDS             1888..>2092
                     /locus_tag="VF061_06910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669270.1"
                     /translation="MRGPRLLMVAGAAGFLGCGGSTTETSSDGRIQITVSTIGAPQQS
                     DQFLVSLNGAQALAVPANGSAAYD"
BASE COUNT          290 a          738 c          773 g          291 t
ORIGIN      
        1 ggctccaccc cgccggggcc gagggtgccg aggatcttcc gggtctctcg ctcgatcttc
       61 tcctcctcgc caccgatgta gggaatcacg ttgccgagcg cgtcgagtga aggaacgccc
      121 gggtagccgg cgccggacac cgcctgcatg gtggagacga agagccgctc gacctggaag
      181 gcccggtgca agggcgccag cgcgagggcg agtgcggcgg tggaacagtt ggggttggcg
      241 aggatcgccc ccgaccaccc gcgtgcctcg cgctggcggt cgatcagcac gagatgatcg
      301 gcgttggcct ccggaatgag gagggggacg tccgcctcca tccggtgggt gcgggtgttg
      361 gtgaccacgt acgcgccggc agcggcgaat gcctgctcga tcggcccggc cacctcggcg
      421 tcgagcgcgg agaaggcgac ggcccccggc aggggcggtg cgcactcggc gacggtgaga
      481 tcggcgatgc gaggcgggag gtccacctgc tcccgccagc ggaccacgtc gccgtagcgg
      541 cggcccgcgc tggtcgacga cgcggccacg gtggcgatct cgaaccacgg atggtcggcc
      601 aggagccgga cgaacttctg gcccaccgtg ccggtcgcgc cgagaataca gacggggatc
      661 ttcgcgctca tgacgcctcg cgggagagga ggtcggcggc caggcgaacg taaaggtcca
      721 cgccatgcag cagctcggcc ttgaggatgt gctcgtccgc cgtgtgggcg acgcggatgg
      781 agccgggccc catctggtag ccctcgcccc aggccgacag gaagggcagg tcgctcgcgt
      841 agctcaccac gaccgtgtcc cagcccggcg gcgccccgcc cgctttgtgg aagggcagct
      901 ccaccgggaa ctcggcgctc acgcccggcg cgagctgctc gcggatggcg gccttgagcc
      961 cgccggtcgg ctccacggtc cgcaccagca gctgggcgga agcgtgcggg gggatgacgt
     1021 tgggggccac gccgccggcg atgaggccga ggttgagggt ggaaggcccc agcagcgggt
     1081 cgtgcggcag cgggagacgg cggatgcgct cgatcgtgtc cagcagcgcc gcgatcgcgc
     1141 tggtcccttc ctcggggtag gccgaatgcg cggcccggcc ggtcgcggtg aggtccaccc
     1201 gcagggtccc cttctgcccc accgacagcc ggttctcggt gggctccccg ttgatcagga
     1261 agcgcccccg ggggccgaag tccgccgccg cccgcgcgcc gtcggagccg ttctcctcgc
     1321 ctacgaggaa gagcagccct acccgccgct cgcccgccgc cgccaggcgc tcggcggcgg
     1381 ccaccatcgc ggccgcgagc cctttggcgt cgcaggtgcc gcggccccgg atcgccacct
     1441 cgtcctccac cacgggcagc tgcggcggga cggtgtccac gtgggtcgag aagaccagct
     1501 ccggctcctc gcgatacgcg tagagattgt cgcggccgcg ggacaccggc tggcgcacgg
     1561 tgtggtagcc cgcgcgccga aggaccccct cgaggaggtc gatcgccggc tgctccgacc
     1621 cggtcggggt ctccagcgcc accagggcgc gcgtcagctc caaggggtcc atgaatgcaa
     1681 acgccccgcc tgcgctcggc acggcggggc tttcaggtcg aaggatggtc gtgacgtccc
     1741 taggccggtc ggcgcccgcc gcggttgcgg cgcttcagca tggtggtcat gcggggagtc
     1801 atgcgtctaa cgtatgagcg gggcgggggg aggggcaagt ggggtctctt gacggcacgc
     1861 ggcccacgcc ctaactctga tcttaccatg cgcggtccgc gcctgctgat ggtggccggc
     1921 gccgcgggct tcctcggctg cggcggcagc acgacggaga cttcctccga cgggcgaatc
     1981 cagatcacgg tctccaccat cggtgcccct cagcagtccg accagttcct cgtctccctg
     2041 aatggtgctc aagccctcgc cgtcccagcc aacggctccg ccgcctacga cc
//
LOCUS       DASUYN010000352         4253 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1217698, whole genome shotgun sequence.
ACCESSION   DASUYN010000352 DASUYN010000000
VERSION     DASUYN010000352.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4253)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4253)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4253
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1217698"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            39..1715
                     /locus_tag="VF061_06915"
     CDS             39..1715
                     /locus_tag="VF061_06915"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX6669271.1"
                     /translation="MTNSRTIVIVGAVAGGASAAARARRTNEHARIVLIERGQHPSFA
                     NCGLPSYIGGEIADRARLLVAGPERFRDWLDVELRTGHEAMAIEAGSRRLLVRDLATG
                     VEETLAWDRLILAPGAAPIRPSLPGADAANVYTLRDLQDADRLRLALASGARRAVIVG
                     AGYIGLELTEMLAHRGLAVTVVERLPQVLQSLDPELASAVSDEVRRHGVCLRLNRSLS
                     GFALDGQRVSAAILDDGTEIETDIVVLALGVRPDTRLAVQAGLAIGASGGIRVDEYMR
                     TSADGIYAVGDAAEYVHAVTGRPGLVPLAGPATRAGRVAGEHAATDASPPMAPVLGTS
                     IVRVFDLVAGSTGLARRQAVAAGVPAGELLVPGHDHATYYPGAAPLLLKVLYDAEDRR
                     LIGAQLVGRDGVDKRLDVLATAIRLGARVEDLATLDLAYAPPFGSARDPLHVAGFLAE
                     NERRGLGRFVTPTGLRTLPAATQLLDVRTPTERAADPCPDAVAIPLGELRARVGELDL
                     RRPVVTICKGGQRAYFASRILRQRGFGDVRTATGGMIAWHGMDRGAPARS"
     gene            1811..2830
                     /locus_tag="VF061_06920"
     CDS             1811..2830
                     /locus_tag="VF061_06920"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX6669272.1"
                     /translation="MRSPLPPALALALLFATPVLAQGRQAFADLGTCRTERGDIIRDC
                     RIGYRTFGQLNPKRDNAILIPSWHGGRSATMTFVLGAKAWVDTTRYFAILMDKPGNGV
                     SISPSNSRSQPGRRFPRLTMGDLVAIQHRALAEHLGITRLHAVVGWSMGGMQAIEWGL
                     RRPEVVGRIVSVAGTPRMGTYEMYFVRSMLNLLDVAVRARLPQDTLAVQLAELWHTVA
                     TTPEQENALPRDSVGVAMAREARSDWLEFHPEDNRLQLEAVAAFDALGEVRRAADAPR
                     SRMLLLFMPEDHVTTAESFREFARLANADTVAYASACGHMAPVCETSEIGSHLRAFLD
                     AEMNS"
     gene            2926..3339
                     /locus_tag="VF061_06925"
     CDS             2926..3339
                     /locus_tag="VF061_06925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669273.1"
                     /translation="MVPRGNALTQVEEITAPNGVDWIAYVEGLPVERPRRWPSRTVLP
                     GRRLRFDSRTDSRVCPELPAGSPFLRQARLIALLAASRPLEEPEPAAPSEEPWRRRWR
                     TLTSALRALNHRGQEALTRAVDQLVQAFHGRRAGT"
     gene            complement(3353..3859)
                     /locus_tag="VF061_06930"
     CDS             complement(3353..3859)
                     /locus_tag="VF061_06930"
                     /inference="COORDINATES: protein motif:HMM:NF021505.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669274.1"
                     /translation="MLPDPLHPAVIHFPIVLMVLLPLVAAWALWTIRRGARPAAAWLV
                     PLVTAAALALSSWIAVETGEREEDRVERVVPEASMHGHEEAAERFLALSGLLLLVAAG
                     GLLRGTPGRVARLGTVVAALGLAGLGAQVGHTGGNLVYRDGAAGAYTDGATGGPFAGD
                     TRGRDRDD"
     gene            3960..>4253
                     /locus_tag="VF061_06935"
     CDS             3960..>4253
                     /locus_tag="VF061_06935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669275.1"
                     /translation="MTEGDVEDDLRGMRSVLALLLAGIIVGGTVDLVLDAPASWGSGH
                     VLFEIGLILGALAAAAWLWLNWKRAAERAKVLQRSLAERQVERDAWRERAAQAL"
BASE COUNT          590 a         1514 c         1533 g          616 t
ORIGIN      
        1 cccgtctccc ttcagccgcc gagacgtacc cttcccgcat gaccaattcc cgaaccatcg
       61 tcatcgtcgg cgccgtcgcc gggggtgcca gcgcggccgc ccgcgctcgc cggaccaacg
      121 agcatgcccg gatcgtcctc atcgagcgcg ggcaacaccc gtcgttcgcc aactgcggcc
      181 tgccctctta catcggcggc gagatcgccg accgcgcgcg cctgctggtg gcagggcccg
      241 agcggttccg ggactggctc gacgtcgagc tgcgcaccgg gcacgaggca atggcgatcg
      301 aggccgggtc tcgccgcctc ctggtccgtg acctcgccac cggagtggag gagacgctgg
      361 cgtgggaccg gctgatcctc gcgccgggcg ccgcgcccat ccgaccgtcc cttcccggag
      421 ccgacgcggc caacgtctac acgctgcgcg acctgcagga cgccgatcgc ctgcgtctcg
      481 ccctggcgag cggtgcccgg cgggccgtga tcgtgggggc cggctacatc gggctggagc
      541 tgaccgagat gctggcccat cgcgggctcg ccgtgaccgt ggtcgagcgt ctgccccagg
      601 tgctccaatc gctggatccg gagctggcct cggccgtgtc cgatgaggtg cgccggcacg
      661 gggtctgtct ccggctgaat cggtccctct cgggcttcgc gctcgacggc cagcgcgtga
      721 gcgccgcgat cctggacgac ggcaccgaga tcgagaccga catcgtggtg ctcgcgttgg
      781 gcgtgcgccc ggacacccgg ctcgccgtgc aggccggcct cgcgatcggc gcgtccggcg
      841 gcatccgggt ggacgagtac atgcggacat cggccgacgg tatctacgcg gtgggtgacg
      901 ccgccgagta cgtgcatgcg gtcaccggcc ggcccgggct cgtacccctc gccggccccg
      961 cgacccgggc cggccgcgtg gcgggggaac atgccgcgac cgacgcctcg ccgcccatgg
     1021 ccccggtgct cggcacctcg atcgtgcggg tcttcgacct ggttgcggga tccaccgggt
     1081 tggcacggcg gcaggcggtg gcggccggcg ttccggccgg tgagctgctg gtccccggtc
     1141 atgatcacgc aacctactac cccggcgcgg cgccgctgct gctgaaggtc ttgtatgacg
     1201 cggaggaccg ccgtttgatc ggagcgcaac tggtgggtcg ggatggagtg gacaagcggc
     1261 tggacgtgct ggcgaccgcg atccggctgg gggcccgggt ggaggatctg gcgaccctcg
     1321 acctcgccta tgccccgccc ttcggctcgg cccgggatcc gctgcacgtg gccgggttcc
     1381 tggcggagaa cgagcgacgc ggtctcgggc ggttcgtcac cccgaccggc ctgcggacgt
     1441 tgcccgcggc gacccagctc ctcgacgtgc gcacgccgac cgagcgggcg gcggaccctt
     1501 gccccgacgc cgtcgcgatc cccctcggcg agctccgggc ccgcgtcggg gagttggacc
     1561 tgcggcgacc cgtcgtcacc atctgcaagg gagggcaacg ggcgtacttc gccagccgga
     1621 tcctgcggca gcggggcttc ggggacgtgc gcacggcaac gggaggcatg atcgcgtggc
     1681 acggtatgga ccggggggcg ccggcccgta gctgaggaga acccgggatc ggatggccgc
     1741 cctgggccgg tccgcgcgca cataagagtt gatcgggggc gtccccggat tcacctctgc
     1801 aggagcgaac atgcgctctc ctctcccccc ggcgctcgcg ctggcccttc tattcgccac
     1861 gccggtcctg gcccaggggc gccaggcgtt cgccgacctc ggcacttgtc gcaccgagcg
     1921 gggcgacatc atccgcgact gccggatcgg gtaccgcacc ttcggtcaac tcaacccgaa
     1981 gcgcgacaac gccatcctga tccccagctg gcacggtggc cggtccgcca cgatgacgtt
     2041 cgtgctgggc gcaaaggcgt gggtggacac cacacgatac ttcgccatcc tgatggacaa
     2101 gccgggcaac ggggtctcga tctccccgtc caacagccgg agccagcccg ggcggcggtt
     2161 tcctcggctc acgatgggcg atctggtcgc catccagcac cgggcgctgg cggagcacct
     2221 gggcatcacc cgcctgcatg ccgtggtcgg ctggtccatg ggcggcatgc aggccatcga
     2281 gtgggggctg cggcggccgg aggtggtggg ccggatcgtg tcggtggcag gcacaccccg
     2341 gatggggacc tacgagatgt acttcgtccg gagcatgctg aacctgctcg acgtggcggt
     2401 tcgggcgcgg ctgccgcagg ataccctggc agtccagctc gccgagctct ggcacaccgt
     2461 cgccaccacc ccggagcagg agaacgccct gccgcgcgat agcgtgggcg tcgccatggc
     2521 cagggaggca cggagcgact ggctcgagtt ccacccggag gacaaccggc tccagctcga
     2581 ggcggtggcc gcgttcgacg ccctgggcga ggtgcgccgg gcggccgacg ccccgcggtc
     2641 ccgcatgctc ctgctcttca tgcccgagga ccacgtcacc acggccgagt cgttccggga
     2701 gttcgcccgg ctcgccaacg ccgacacggt ggcgtacgcc agcgcgtgcg ggcacatggc
     2761 accggtgtgt gagacgtcgg agatcggaag ccacctccgg gcctttctcg acgccgagat
     2821 gaattcctga aaccttcacg ctcgcctcat acgccactcg gcagattgca gttgaacggc
     2881 ggtcatcccg agcggaagcg aatgtggcgc atgtcggacg agcggttggt acccagaggc
     2941 aacgcactga cccaggtgga agagatcacc gcccccaacg gggtggactg gatcgcctat
     3001 gtcgaaggcc ttccggtcga gcgcccccgt cgatggccga gccggacggt cctgccgggc
     3061 cgacggctcc ggttcgactc ccggaccgat tcccgcgtgt gtccggaact accggccggc
     3121 tctccgttcc tccggcaggc gcggctgatc gctctgctcg ccgcctcccg tccgctggaa
     3181 gagcccgagc ccgccgcgcc gagtgaggag ccatggcgcc ggcggtggcg gacgctgacc
     3241 tccgcccttc gcgcactgaa tcaccgcggg caggaggcgc tgactcgtgc cgtcgatcag
     3301 ctcgtccagg cgttccatgg ccgccgggcg gggacctgag acggagcttc ggtcagtcgt
     3361 ccctgtcccg cccgcgggtg tcgcccgcga acggtccgcc cgtcgcgccg tcggtatacg
     3421 cgccggcggc gccgtcccga tagaccagat tgccgccggt atgccccacc tgggcgccaa
     3481 ggcctgccag gcccagcgcc gccacgacgg tgccgagccg tgcgacccgg ccaggcgtcc
     3541 cccgaaggag gccgccggcg gccaccagaa gcagaaggcc cgagagcgcc agaaagcgct
     3601 ccgcggcctc ctcgtgcccg tgcatggagg cttcggggac cacgcgctcc accctgtcct
     3661 cttcccgctc cccggtttcg acggcgatcc aggagctgag ggccagggcg gcggcggtca
     3721 ccagcggaac gagccacgcg gccgccgggc gggcgccgcg ccggatggtc caaagcgccc
     3781 aggccgctac cagcggcagc aggaccatca gaacgatggg gaagtggatc accgcagggt
     3841 ggagcgggtc gggcaacatg ggcgactccg gtagaggtcg gccgtagagt acggaaccgg
     3901 atccggtccg gctatcgggc atccgacctg aatcccggga tcgaggttca atccggcaaa
     3961 tgacggaggg cgatgtggag gacgatctca gggggatgcg gtccgtgctc gcgctcctgc
     4021 tcgcgggcat catcgtcggc ggcacggtgg atctcgtcct cgatgcgccg gcgagctggg
     4081 gctcgggaca tgtcctgttc gagatcggtc tcattctggg cgcgctcgcc gccgccgcgt
     4141 ggctgtggct caactggaag cgggcggcgg aacgggcgaa ggtgcttcag cgctcgctgg
     4201 ccgagcggca agtcgagcgg gacgcctggc gcgagcgagc ggctcaggca ctg
//
LOCUS       DASUYN010000353         2062 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_997615, whole genome shotgun sequence.
ACCESSION   DASUYN010000353 DASUYN010000000
VERSION     DASUYN010000353.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2062
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_997615"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..246)
                     /locus_tag="VF061_06940"
     CDS             complement(<1..246)
                     /locus_tag="VF061_06940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669276.1"
                     /translation="MTEPLAGAVPRPVKGLSAVSLFNDFASEMVYPVLPAFVTTTLGG
                     SAVALGALDGAADLTAAAVKWGSGRLADRPRWAKPLIL"
     gene            complement(239..1792)
                     /locus_tag="VF061_06945"
     CDS             complement(239..1792)
                     /locus_tag="VF061_06945"
                     /inference="COORDINATES: protein motif:HMM:NF017745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF885 family protein"
                     /protein_id="HEX6669277.1"
                     /translation="MAITDALCRSFLDLWWHFDPAAATSAGAPGQDSRLGTFDPDAVR
                     SHVAALRSIAGAAEDLEVEALADEIDRTALLDHLRVLLFRLEEEHPHRTDPVFWIHHA
                     CSAFDGLLLRSASDPASATAALDRLRELPRFLTDARDTLRDPPQVLLDAAGAMLPGLS
                     VLLDETATRFAPLWAAFDEDDSAAIVTAAESAVGRTGQAFRSEMVASPAPGAEAVGED
                     EVDRRLHHEHASVHNGAEVWRAANRLVTETEAEVIALAAVIDPGRGWREVYEDLPESG
                     ADAATSWRNALAESWRVAEAAGFGSVPPAPLEVTPAPDYLQVLEPEATYRQSDGRSPA
                     RVLVSGAAPMLVPWLAARLGPPGVHLHRSRCDGLSRLVRRHLSTSSTALGWSLYAQEM
                     VRDHGFLPDPESRLAERVLLLRDAHLAVVDLGIHTRQFTADDAVGYLTTHLPVERATA
                     LAAVWRVACRPTSAAAAILGKRELIRLRDNVREARGSSFTLDGFHEEVFGYGGIPVPL
                     IRWGMGLDD"
     gene            complement(1792..>2062)
                     /locus_tag="VF061_06950"
     CDS             complement(1792..>2062)
                     /locus_tag="VF061_06950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669278.1"
                     /translation="SGSYPGATIHPPVLIEDGVVLERSTVGPNVTIEQGSVIRDSVLS
                     HAIVGARCSLTGVQLSHAMLGNDVVMRDFRGTASLGDHSELTGSG"
BASE COUNT          305 a          742 c          752 g          263 t
ORIGIN      
        1 gagaatgagc ggcttggccc accggggccg gtcggccagg cgtccgcttc cccatttgac
       61 cgcggccgcg gtgagatccg ccgcgccatc gagcgcaccc agcgccaccg cgctgccgcc
      121 cagcgtcgtg gtgacgaagg cgggcagcac cgggtagacc atttcgctgg cgaagtcgtt
      181 gaacagcgat accgcggaga gtcccttgac cgggcgtggc accgctccgg cgaggggctc
      241 agtcatccag tcccatcccc cagcggatca acggcaccgg gatgcccccg tacccgaaga
      301 cctcctcgtg gaatccgtcc agggtgaagc tcgagccccg ggcctcccgg acattgtccc
      361 ggagccggat cagctcccgt ttgccgagga tggccgccgc ggcgctggtg ggccggcagg
      421 ccacccgcca caccgccgcc agcgcggtgg cccgctcgac cggcaggtgg gtcgtgaggt
      481 agccgacggc atcgtcggcg gtgaattgcc gggtgtgaat ccccaggtcc acgaccgcga
      541 ggtgggcatc gcgaagcagc agcacccgct cggccagccg ggactcggga tcgggcagga
      601 aaccgtggtc acggaccatc tcctgggcgt agaggctcca gcccagcgcg gtactcgagg
      661 tcgacaggtg gcgccggacc aggcgggaga ggccgtcgca gcgcgagcga tgcaggtgga
      721 cgccgggcgg ccccaggcgc gcggcgagcc agggcaccag catcggcgcc gccccggaca
      781 ccagcacccg tgcggggctc cggccgtcgg actgtcgata ggtcgcctcg ggctcgagca
      841 cctggaggta gtcgggcgcc ggggtcacct cgagtggcgc ggggggaacc gatccgaagc
      901 cggccgcctc ggccacgcgc cacgattccg ccagcgcgtt ccgccaggag gtggcggcat
      961 ccgccccgct ctcgggcagg tcctcgtaga cttcccgcca gccccgcccc ggatcgatga
     1021 ccgcggccag cgcgatcacc tcggcttcgg tttcggtcac cagccgattg gcggcgcgcc
     1081 agacctcggc gccgttgtgc acgctggcgt gctcgtgatg cagccgccgg tccacctcgt
     1141 cctcccccac cgcttcggcg cccggcgccg ggctcgcgac catttccgag cgaaacgcct
     1201 ggccggttcg gcccaccgcc gattcggcgg cggtgacgat cgcggcggaa tcgtcctcgt
     1261 cgaaggcggc ccacagcggc gcgaaccggg tcgcggtctc gtcgagcagc acggaaagcc
     1321 ccggcagcat cgcccccgcg gcatccagca gcacctgggg cggatcccgc agggtgtccc
     1381 gcgcgtcggt caggaagcgg ggcagctcgc gcagccggtc cagcgccgcg gtggcggagg
     1441 ccggatcgct ggccgagcgc agcagcagcc cgtcgaacgc cgagcaggcg tggtggatcc
     1501 agaacaccgg gtcggtgcgg tgggggtgtt cctcttcgag gcggaagagc aggacccgca
     1561 ggtgatcgag cagcgcggtg cggtcgatct cgtcggcgag cgcttcgacc tccaggtcct
     1621 cggccgcgcc cgcaatcgag cgcagcgccg ccacgtggct ccggaccgcg tcgggatcga
     1681 aggtgcccag gcggctgtcc tgtcccggcg ccccggccga ggtagcggcg gcgggatcga
     1741 agtgccacca gaggtcgaga aacgaacggc agagcgcgtc ggtaatcgcc actagccgct
     1801 gccggtcagc tcgctgtgat ctcccaggct ggcggtgccg cgaaagtcgc gcatgaccac
     1861 gtcgttcccc agcatcgcgt gggagagctg caccccggtg agggagcagc gcgcccccac
     1921 gatggcgtgg gaaagcaccg aatcccggat cacgctgccc tgctcgatgg tgacgttggg
     1981 ccccacggtg gagcgctcca gcacgacccc gtcctcgatc agcaccggcg ggtggatggt
     2041 ggcgccggga taggagcccg ac
//
LOCUS       DASUYN010000354         4178 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_113785, whole genome shotgun sequence.
ACCESSION   DASUYN010000354 DASUYN010000000
VERSION     DASUYN010000354.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4178)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4178)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4178
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113785"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(94..273)
                     /locus_tag="VF061_06955"
     CDS             complement(94..273)
                     /locus_tag="VF061_06955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669279.1"
                     /translation="MSADSSAAPTAAMTPVPERAAAAILGSMIAMILLLMAILVQTTW
                     MEPPSSSPRRSGCST"
     gene            complement(308..1708)
                     /locus_tag="VF061_06960"
     CDS             complement(308..1708)
                     /locus_tag="VF061_06960"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HEX6669280.1"
                     /translation="MQRLLKLTLGATLLGACAPSLPPAPAVAPLAAPVHDSLAPLSAG
                     PASDIVPLADLSVSAPGDEVASLDADAVSWDFDVQTYASHPRVQHYLSYFQAMAPSRL
                     AVVLERGARYEPMIRERLTAAGLPGDLFYLALIESGYSSEAVSRAYAVGMWQFMRGTG
                     RGYGLRVDTWVDERRDPVKSTDAAARHLRDLRERFGSLYLAAAAYNAGAGKVSRSLNQ
                     LEPAEELEAAEDSGDAAFFRLVESKLLAHETRDYVPKLIAAAIIAKQPARYGIATAPV
                     QPFAYDSLVVTDATGLDVVARLADVTLGEIRDLNPHYLRLATPPDALSVIRLPAGTGQ
                     VAAAAYAELPAGERVHYLTHVVRKRERLTTIAANYRIPLADLRAANPKQGPRPHAGTR
                     LVIPAVAIPSAIAIRAAGDRRPHHATARTHKVRRGETLTGIARRYRVSLAALKRANAI
                     RNEHALRAGARLRIPG"
     gene            complement(1880..3082)
                     /locus_tag="VF061_06965"
     CDS             complement(1880..3082)
                     /locus_tag="VF061_06965"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEX6669281.1"
                     /translation="MRSAARAATSAAVAFAAAACASALEPAIPVPAPVAPKDSIEVSL
                     FLIGDAGSHAYDGEPVLRELALQSDSLRPVRQYVVFLGDNVYPRGIPPVGHPRREDAE
                     RRLAAQVLAIRKGSAQGLLIPGNHDWDRQGRDGWNAIRRQDSLARRFGGTDVRLAPSG
                     GCPGPDVVDLGEHLRLIAMDSEWWLHNDVKPYGDTSPCPTKTYQEVEDSLAGALRDKG
                     ERHAIVLTHHPLRSGGIHGGSFTLGDHIFPLRNFKRWLWVPLPLIGSLYPFARQMGIS
                     NQDVFGGKYRQMRSAFERAFRKHPPLAVASGHDHDLQVIRGGRSGITWAAYQLVSGAG
                     ILGHASVVRDIEGSLFEREAAGFMRLDVTRDGRVRLSVTTVVPDGERKEGESAEVYSL
                     WLLGEEGL"
     gene            complement(3066..3800)
                     /locus_tag="VF061_06970"
     CDS             complement(3066..3800)
                     /locus_tag="VF061_06970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669282.1"
                     /translation="MELPAQLAEVSGLASTPDGRLLAHGDEQAVIFQIDFTGRKVVKR
                     FAVGNGGGPLLGDFEDIQVVGDRIFLVTSAGELLETREGADGATVPVLRRTRGLRGTC
                     EVEGLSWDEPSSSMLLLCKETRGKRWKDQLVILTVDPATGEFAPEPKLTVPQAELSRV
                     TGEKHFAGSAMVRHPRTGTWILVAGPQRAFAEIDSTGKVLGGGVLPRTHHRQPEGLAI
                     GSDLTLLISDEAAGGRATITGYAIRR"
     gene            3984..>4178
                     /locus_tag="VF061_06975"
     CDS             3984..>4178
                     /locus_tag="VF061_06975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669283.1"
                     /translation="MIVLPELRTPPEVCHVPRIARNVYRVATALCLGALPASAAAQAG
                     ADAKPGQTLAVAPGPQYDTGW"
BASE COUNT          614 a         1419 c         1541 g          604 t
ORIGIN      
        1 cggtcttcgg attggcggcg cgaaggtcgg cgagcggaat gcggtagttg gccgcgacgg
       61 tcgtgagccg ctcgttccgg cggagcacgt gggtcaggta ctgcacccgc tcctccgggg
      121 ggagctgctc gggggctcca tccaggtcgt ctgcaccagg atggccatga gcaggaggat
      181 catggcgatc atcgagccga ggatggcggc ggcggcccgc tcgggaacgg gggtcatcgc
      241 ggcggtggga gcggcgctcg agtcggcgga cacgggtcgg gttccgttca aggggttgag
      301 gggtggttca gccgggaatg cgcagtcgtg cgccggccct cagcgcgtgc tcgttgcgga
      361 tcgcgttggc gcgcttgagc gcggccagcg acacccggta gcgccgcgcg atgccggtga
      421 gggtctcgcc ccgtcggacc ttgtgggtcc gcgcggtggc gtggtgcggc cggcggtcgc
      481 ccgcggcccg gatcgcgatg gccgaaggaa tcgcgaccgc cgggatgacc agccgcgtgc
      541 ccgcatgggg acgagggccc tgcttcgggt tggcagcgcg gagatcggcc agcgggatcc
      601 ggtagttggc ggcgatggtc gtgagccgct cccgtttccg gaccacgtgg gtcaggtagt
      661 gaacgcgctc gccggcgggg agctccgcat acgcggccgc ggccacctgg ccggtgccgg
      721 ccgggaggcg gatcaccgag agggcgtcgg gaggcgtggc gagccgcagg tagtggggat
      781 tgaggtcgcg gatctcaccc agggtgacat ccgcgaggcg ggccaccacg tccaggccgg
      841 tcgcgtcggt caccaccagc gagtcgtagg cgaagggctg caccggcgcg gtcgcgatgc
      901 cgtagcgggc cggctgcttc gcgatgatgg cggcggcgat gagcttgggg acgtagtccc
      961 gggtctcgtg ggccagaagc ttggactcga ctagccggaa gaaggccgcg tccccgctgt
     1021 cctcggccgc ctccagctcc tcggccggct ccagctggtt caggctgcgc gagaccttgc
     1081 cggcgccggc gttgtaggcc gcggccgcga gatagagcga gccgaagcgc tcgcggaggt
     1141 cgcgcaggtg gcgcgcggcc gcgtcggtgg acttcaccgg gtcgcgacgc tcgtccaccc
     1201 aggtatccac ccgcagaccg taccccctgc cggtgccgcg catgaactgc cacatgccca
     1261 cggcgtacgc ccggctcacg gcctcgctgg agtagccgct ctcgatcagg gcgaggtaga
     1321 acagatcacc cggcagtccc gccgccgtga gccgctcgcg gatcatcggc tcgtagcggg
     1381 cgccccgctc gagcacgacg gccagccggc tcggggccat cgcctggaag tagctcaggt
     1441 agtgctggac ccggggatgc gaggcgtagg tctggacgtc gaaatcccaa ctgacggcgt
     1501 ccgcgtcgag tgacgcgacc tcgtcacccg gcgcgctcac cgagagatcc gccagcggca
     1561 cgatgtcgga ggccggtccc gccgagaggg gcgcaaggct gtcgtgcacc ggcgcggcga
     1621 gcggcgccac cgcgggcgca ggcggcagac tcggcgcaca ggcaccgagg agggtcgctc
     1681 cgagtgtgag cttcagcagt cgctgcatgc cggccgtaga gagagttccg aggcagggtc
     1741 ttcccgcgcc gttcagaagc acaaaacggg ccgtacgagg cgacgtgcta agtcgtttgg
     1801 ggaatgaggc ttagggcaga gattccgggt cttgcgcgag ggggctcagg cgaaaggcaa
     1861 aagggttcgg caattcgctc tagagtccct cctcgcccag gagccagagc gagtagactt
     1921 ccgcgctctc accctccttg cgttcgccat cggggaccac cgtggtgacc gacagtcgca
     1981 ccctgccgtc ccgggtcacg tccagccgca tgaagccggc ggcctcgcgc tcgaagagcg
     2041 acccctcgat gtcgcgcacc acgctcgcat gccccaggat tccggcgccg ctcaccagct
     2101 ggtaggctgc ccaggtgatc cccgagcggc cgccccggat cacctgcagg tcgtggtcgt
     2161 gccccgacgc gaccgccagg ggcgggtgct tccggaaggc ccgctcgaag gcgctgcgca
     2221 tctgccggta cttccccccg aagacgtcct ggttggagat ccccatctgc cgggcgaaag
     2281 ggtagagcga gccgatcagc ggcagcggca cccagagcca ccgcttgaag ttcctgaggg
     2341 ggaagatgtg gtcgcccagg gtgaaggagc cgccgtggat gccgccggag cgcaggggat
     2401 gatgggtgag gacgatcgcg tggcgctcgc ccttgtcgcg caacgcgccg gcgagcgagt
     2461 cctccacctc ctggtaggtc ttcgtggggc agggcgacgt gtcgccgtag ggcttcacgt
     2521 cgttgtgcag ccaccattcc gagtccatcg cgatgagacg caggtgctcc ccgaggtcca
     2581 ccacgtcggg tccgggacag ccgccgctgg gggcgagccg cacatcggtg ccgccgaacc
     2641 gccgggccag cgagtcctgg cgacggatgg cgttccagcc gtcccgcccc tggcggtccc
     2701 agtcgtggtt gccggggatg agcaggccct gcgcgctccc tttccggatg gcgagcacct
     2761 gggcggcgag ccgccgctcc gcgtcctcac ggcggggatg gcccaccggc gggatgccgc
     2821 gggggtagac gttgtcgccg aggaagacga cgtactggcg aacgggacgg agcgaatcgg
     2881 actggagcgc cagctcccgg agcaccggct caccgtcgta ggcgtggcta ccggcgtcgc
     2941 cgatgaggaa gagcgagacc tcgatgctgt ccttcggcgc caccggcgcg ggaacgggta
     3001 tcgcgggctc gagcgccgac gcgcaggcgg ccgccgcgaa ggcgaccgcc gcgctggtgg
     3061 ccgccctagc ggcggatcgc atagccggtg atcgtcgccc tcccccccgc cgcttcatca
     3121 ctgatgagga gggtgagatc ggaaccgatc gcgagtccct ccggctgccg gtgatgcgtc
     3181 cgtggcagca cgccaccgcc cagcaccttc ccggtcgagt cgatctcggc gaaggcgcgc
     3241 tggggcccgg cgaccaggat ccaagtcccg gtccggggat ggcgcaccat ggcggatccg
     3301 gcgaagtgct tctccccggt cacccgactc agctccgcct ggggcaccgt cagcttcggt
     3361 tccggggcga actcgccggt cgcgggatcg accgtcagga tcacgagctg gtccttccac
     3421 cgcttccccc tggtctcctt gcacagcaga agcatggagg acgacggctc atcccagctc
     3481 agcccctcga cctcgcaggt tccgcggagc ccgcgggtcc ggcgcaggac ggggacggtg
     3541 gcgccgtcag ccccctccct cgtctccagc agctcgccgg cgctggtgac gaggaagatc
     3601 cggtcgccca ccacctggat gtcctcgaaa tcgcccagga gcggcccgcc cccgttgccg
     3661 acggcgaagc gcttcaccac cttgcggccg gtgaaatcga tctggaagat cacggcctgc
     3721 tcgtctccgt gcgccaggag ccggccatcg ggggtggatg ccagcccgga cacctcggcc
     3781 agctgggcgg ggagctccat ccgtcctgac ggtgggcctc ccagatcgta gtgacgcaac
     3841 ccgtggcgag catcggactg ggcgttggcg cagcccgtgg cgccgagagc gagcagaagt
     3901 agcgggaaga agtacattga gctacggagt ataacgccgc gggctctcgg ctcggatctc
     3961 atgtacatcg cgaggactcc tggatgatcg tccttccgga attgcgtacg cccccggagg
     4021 tatgccacgt accccgcatc gcccgcaacg tctaccgcgt cgccaccgcg ctgtgcctcg
     4081 gcgccctgcc cgcgtcggcc gcggctcagg cgggcgccga cgcgaaaccg ggtcagacgc
     4141 tcgcggtagc gccgggcccg cagtacgaca ccggctgg
//
LOCUS       DASUYN010000355         3490 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_336775, whole genome shotgun sequence.
ACCESSION   DASUYN010000355 DASUYN010000000
VERSION     DASUYN010000355.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3490)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3490)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3490
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_336775"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            83..691
                     /gene="lexA"
                     /locus_tag="VF061_06980"
     CDS             83..691
                     /gene="lexA"
                     /locus_tag="VF061_06980"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: protein motif:HMM:TIGR00498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor LexA"
                     /protein_id="HEX6669284.1"
                     /translation="MPLTKRQSEILSYLQGHIQDQGYAPSFEEIAEQFGFQSLATVHE
                     HLTNLERKGYIRRSYNESRSIEVLPPRGTSAATEIPLLGKVAAGTPIESLMHQESIAV
                     PDAMLPRRGPNYALRVQGASMIDEHILDGDVVVVHGKQSAENGEMVIALVNGSEATVK
                     KFYREPGGWIRLQPANATMQPMRFQERDVLIQGIVVGVIRKY"
     gene            complement(713..1759)
                     /gene="trpD"
                     /locus_tag="VF061_06985"
     CDS             complement(713..1759)
                     /gene="trpD"
                     /locus_tag="VF061_06985"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: protein motif:HMM:TIGR01245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004048 - anthranilate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HEX6669285.1"
                     /translation="MTQDSPLQQAIQVLARGGSLSAESAAAAFGVLMRGEATPVQAAA
                     LLMGLRAKGETAEELAGAALALRLAMLRVEVERAELLVDTCGTGGGRVGTLNLSTAAA
                     FVVAGAGVPVAKHGNRSYTSRSGSADVLEALGVSIELSAEAAAAVLRESGLVFLYAPS
                     FHPATRHVGPVRRELGVPTIMNLLGPLVNPAGVRRQVIGVSDETRAPLVAAALARLGA
                     AHALVLHAVVGMDEVSPSGRTLVWEVCDGAVAEWDIDPSSYGLACEDLDGLAGGEPAE
                     NARRIERLLAGEEGEPAVRCAVLLNAAAGLYVSGGGLTFEEAVERAADALESGAAAMA
                     LERLRRNAGAPSSA"
     gene            1854..2657
                     /gene="truA"
                     /locus_tag="VF061_06990"
     CDS             1854..2657
                     /gene="truA"
                     /locus_tag="VF061_06990"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HEX6669286.1"
                     /translation="MSRTFLAALHFDGSGFVGWQRQAAGRSVQAEFERVLERLFARRA
                     VAHAAGRTDAGVHAVGLGVSFSAPESWSAAALRRAMNALLPKDCWVEAVHPMRSGFHA
                     RKSAISRRYRYDIGTDDASASPFRRRFEWALGRPLDPIALHAAATLLLGEHDFRAFAA
                     KGEPKPHYRCRLARAEWVLRPDSRGVSFHVEADRFLHHMVRMLVGTMVDVGLDRRPLS
                     DIETLLERGDNADTSPPAPPQGLYFVAATYPDALYADEAEEAHVAAQRA"
     gene            2635..>3490
                     /locus_tag="VF061_06995"
     CDS             2635..>3490
                     /locus_tag="VF061_06995"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HEX6669287.1"
                     /translation="MWPPNARSATVLLLAGVLACDRPEPAVRRSSAGAQAAAVERERP
                     AAPQAAIDASRRTALVTATERVSRAVVSINTSARREVRARSPWDFFFVPERSRVIEGY
                     GTGFVVRPDGIIITNQHVVAKAERVVVTLPDGSDLPAKVLGEDALTDIAVLQVARQGL
                     PTVSTGRSTDLMIGEWVVALGNPYAFLLGNAEPTVTVGVVSATNRNILPGGDQAGLYF
                     DMIQTDAAINPGNSGGPLTNALGEVVGVNSSIFSSSGGSVGLGFAIPIERALRVTEEI
                     VRSGSVRRA"
BASE COUNT          507 a         1318 c         1172 g          493 t
ORIGIN      
        1 ccatcttgcc cttcggcgcg tgttcgggta agataattcg ggctctgttc ggtcgaatct
       61 acccagtcac ggagacggcg cgatgccgct gaccaagcgt caaagtgaaa tcctcagcta
      121 cctgcagggg cacatccagg atcaggggta cgcccccagc ttcgaggaga tcgccgagca
      181 gttcgggttc cagtcgctcg ccaccgtgca cgagcatctc accaacctcg agcgcaaggg
      241 ctacatccgc cgttcctaca acgagagccg ctccatcgag gtgctgccgc cgcggggcac
      301 gtcggccgcc accgagattc ccctcctcgg caaggtcgcg gccggcacgc cgatcgaatc
      361 gctgatgcac caggagagca tcgcggtccc cgacgccatg ctcccccgcc gcggtcccaa
      421 ctacgcgctc cgggtccagg gcgcctcgat gatcgacgag cacatcctcg acggcgatgt
      481 cgtggtcgtg cacgggaagc agtcggccga gaatggcgaa atggtcatcg cgctcgtgaa
      541 cggcagcgag gccaccgtca agaagttcta tcgcgagccc gggggctgga ttcgcctcca
      601 gcccgccaac gccaccatgc agccgatgcg cttccaggag cgggacgtgc tgatccaggg
      661 catcgtggtc ggtgtgatcc ggaaatactg agcgccgggt ccgggcgggc cgtcaggccg
      721 acgacggcgc tcccgcgttc cggcgcagac gctcgagcgc catcgccgcc gctccgctct
      781 ccagcgcgtc cgccgcgcgc tccaccgcct cctcgaacgt cagtccgccg ccggaaacat
      841 agagtcccgc cgccgcgttg agcagcaccg cgcagcggac ggcgggctca ccctcctcgc
      901 cggccaggag ccgctcgatg cgccgcgcgt tctccgcggg ctccccgccg gcgaggccgt
      961 ccaggtcctc acaggccaac ccgtagctcg acgggtcgat gtcccactcc gccaccgcgc
     1021 cgtcgcacac ctcccagacc agcgtccggc cgctggggct gacctcgtcc atgccgacga
     1081 ccgcgtgcag caccagcgca tgggccgcac cgaggcgcgc gagggcggcg gccacgagcg
     1141 gcgcgcgggt ctcatccgat acgccgatca cctgccgtct caccccggca ggattcacca
     1201 gcggaccgag caggttcatg atggtgggga cgccgagctc gcggcggacc gggccgacgt
     1261 ggcgcgtggc cgggtggaag ctcggagcgt agaggaacac caggccgctc tcgcgcaaca
     1321 ccgccgccgc ggcctcggcg ctcagctcga tgctgacgcc cagcgcctcc agaacgtcgg
     1381 ccgatcccga ccgcgaggtg tagctccggt tcccgtgctt ggcgacgggt acgcccgcgc
     1441 cggccacgac gaaggcggcc gcggtcgaga ggttcagcgt gccgacccgc ccacccccgg
     1501 tgccgcaggt gtccaccagc agttcggctc gctctacctc gacccgcagc atcgcgaggc
     1561 ggagtgcgag ggccgcgccg gccagctcct ccgcggtctc gcccttcgcc cggagcccca
     1621 tcagcagggc ggccgcctgg accggtgtgg cctcaccccg catgaggacg ccgaacgccg
     1681 cggcggccga ctcggccgag agcgatcccc ctcgggcgag cacctggatg gcctgctgga
     1741 gcggactgtc ctgggtcacg gtcgaacgta cccaaaaaac tgggcttttg tcaaatggga
     1801 caaggatttg cgcaacttgc cggggggtcc ccggacggct agattccggc ccgatgagcc
     1861 ggacatttct cgccgcgctg cacttcgacg ggtcggggtt cgtcgggtgg caacgccagg
     1921 cggccggtcg ctcggtccag gccgagttcg agcgggtgct ggagcgcctc ttcgcccggc
     1981 gggccgtggc tcatgcggcg ggccggaccg acgccggcgt tcacgccgtc gggctcggcg
     2041 tcagtttctc cgcccccgag tcctggagtg ctgctgcgct ccgccgcgcg atgaacgcgc
     2101 tcctccccaa agactgctgg gtcgaagcgg tgcacccgat gcggtcgggt tttcacgccc
     2161 gcaagagcgc gatctcccgc cggtaccgct acgacatcgg caccgacgac gcctccgctt
     2221 cgcccttccg ccgccgcttc gagtgggccc tcggccgacc gctggatccg atcgccctcc
     2281 acgcggccgc cactctgctc ctgggcgagc acgacttccg ggccttcgcc gcgaagggcg
     2341 agcccaagcc gcactaccgc tgccgcctcg cccgcgctga gtgggtcctg cgccccgaca
     2401 gtcgcggcgt gagcttccac gtcgaggccg accgcttcct gcaccacatg gtccgcatgc
     2461 tggtgggcac gatggtggac gtgggcctgg accggcgccc gctctccgac atcgaaaccc
     2521 tgctggagcg gggcgacaac gccgacacca gtccaccggc gccgccccag ggcctctact
     2581 tcgtcgccgc gacctacccc gacgcgctct atgccgacga ggcggaggag gcccatgtgg
     2641 ccgcccaacg cgcgtagcgc gaccgtgctc ctgctggccg gggtgctggc ctgcgatcgg
     2701 cccgagcccg ccgtgcgccg gagctcggcc ggggctcagg ccgcggccgt cgagcgggag
     2761 cgcccggccg cgccccaggc ggcgatcgac gcctcgcgcc gcaccgcgct ggtcaccgcg
     2821 accgaacggg tgtcccgggc ggtggtctcg atcaacacca gcgcccgtcg cgaggtgcgc
     2881 gcgcgctcgc cgtgggactt cttcttcgtc cccgagcgct cccgggtaat cgagggctac
     2941 ggcaccggct tcgtcgtccg tcccgacggc atcatcatca ccaaccagca cgtcgtcgcc
     3001 aaagccgagc gggtggtggt gaccctgccc gacggcagcg acctcccggc caaggtcctg
     3061 ggcgaggacg cgctgaccga catcgccgtg ctccaggtcg cgcggcaggg actccccacc
     3121 gtgtccaccg gccggagcac cgatctcatg atcggggaat gggtcgtggc gctggggaac
     3181 ccctacgcct tcctgctcgg caacgcggag cccaccgtca ccgtgggcgt agtgagcgcc
     3241 accaaccgca acattctgcc gggcggcgat caggccggcc tgtacttcga catgatccag
     3301 accgacgccg cgatcaaccc gggaaactcg ggcggcccgc tcaccaacgc gctgggcgag
     3361 gtcgtcggcg tgaactcctc catcttcagc agcagcggcg gctccgtggg gctcggcttc
     3421 gccatcccga tcgagcgggc gctccgggtg acggaggaga tcgtccggag cggctcggtg
     3481 cgccgggcgt
//
LOCUS       DASUYN010000356         2251 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_998229, whole genome shotgun sequence.
ACCESSION   DASUYN010000356 DASUYN010000000
VERSION     DASUYN010000356.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2251)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2251)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2251
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_998229"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(86..571)
                     /locus_tag="VF061_07000"
     CDS             complement(86..571)
                     /locus_tag="VF061_07000"
                     /inference="COORDINATES: protein motif:HMM:TIGR00738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEX6669288.1"
                     /translation="MLSQTSQYALRTVLHLAGLPRGQRAAAVDLARSGGIPGNYLSKT
                     LHQLARAGVVASTRGKGGGFVLARPADRISLAEVVAPFQDVGERACLLGRPSCSDATP
                     CPAHAHWKRVAEQVAGFFSGTTVAALLALPTDHPLVETAGILKKGSRRSHKAFADPTQ
                     E"
     gene            655..945
                     /locus_tag="VF061_07005"
     CDS             655..945
                     /locus_tag="VF061_07005"
                     /inference="COORDINATES: protein motif:HMM:NF016303.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF542 domain-containing protein"
                     /protein_id="HEX6669289.1"
                     /translation="MTIRPDLTVNALVRDRPETLAVLARAGIDACCGGGQTLERAAAD
                     AGIAWTELLGRLEAAGRPGSDVPPASAERGGHPVAEASASSEVACRHWSDAT"
     gene            918..1355
                     /locus_tag="VF061_07010"
     CDS             918..1355
                     /locus_tag="VF061_07010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669290.1"
                     /translation="MPPLVRRYLKTAIGFLLFGVGLGVYMLARRELGGVWASPWWTSA
                     HTHAILVGFVMMMILGVALWMFPRPAKEDTHFDPRLAEAAYWCLTLGTAARVVGELLR
                     PASEAAGLRWTVVLGGAAQALGLILFFWTMWSRIRGRPEAERS"
     gene            complement(1363..2103)
                     /locus_tag="VF061_07015"
     CDS             complement(1363..2103)
                     /locus_tag="VF061_07015"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX6669291.1"
                     /translation="MATPLPLVLVIEDEPQMRRLLRTTLRAHGYQVVEAATAREGLAQ
                     AAGRNPDLVLLDLGLPDGDGLEVARTIRRSSRRPIIVISARGQERDKVAALDEGADDY
                     LTKPFGVQELLARLRVALRHAATPAGTPPAPVFQAGDLRVDSVRRRVFRGSQEVHLTP
                     TEYRLLTALIRHAGRVVTHRQLLHEVWGANYADQTHYLRVYMAQLRHKLEPDAARPRL
                     LTTEPGIGYRLLDEAPADQETAPSVPEP"
BASE COUNT          301 a          774 c          836 g          340 t
ORIGIN      
        1 gcgcccagag cgacggcggt gaggatgggg atccagcgat gcacggcggc catggtcggt
       61 cctctcgtaa gtcggggtgc ggtactcatt cttgtgtggg gtcggcaaat gccttgtgag
      121 atcgccgtga acccttcttc agaattccgg cggtctccac cagcggatgg tcggtcggga
      181 gggccagcag cgcggcgacg gtggtcccgg agaagaaacc ggcgacctgc tcggccaccc
      241 gcttccagtg ggcgtgcgcc gggcagggcg tggcgtcgct gcaactcggt cggcccagca
      301 ggcaggcgcg ctccccgaca tcctggaagg gcgccaccac ctcggccagg ctgatccgat
      361 cggccggccg ggcgagcacg aagccgccgc ccttgccccg ggtgctggca acgacgccgg
      421 cgcgagcgag ctggtgcagg gtcttggaca ggtagttgcc gggaatgccg ccgctgcgcg
      481 ccaggtccac cgccgcggcc cgctgccccc gagggagccc ggccaggtga aggacggtgc
      541 gcaaggcata ctgggaagtc tgggacagca tccgggctcc ggggctggtt aagtggctat
      601 tcgcatgtta atatgatatt atgtagaata caagtccctt caccggagtg cgcgatgacc
      661 attcgccccg acctgacggt gaacgcgctg gtgcgcgacc gtcccgagac cctcgccgtg
      721 ctcgcccgcg ccgggatcga tgcctgctgc ggcggcggcc agacgctgga gcgcgccgcc
      781 gccgacgccg gcatcgcgtg gaccgagctg ctggggcggc tggaggcggc agggcggccg
      841 ggctcggacg tacccccagc cagcgcggag cgtggtgggc atcctgtcgc cgaggcttcc
      901 gcgtcgagcg aggtcgcatg ccgccactgg tccgacgcta cctgaagacc gcgatcggct
      961 tcctcctctt cggcgtcggc ctgggagtct acatgctggc gcggcgggag ctcgggggcg
     1021 tgtgggcctc gccctggtgg accagcgcgc acacccacgc gatcctggtc ggcttcgtga
     1081 tgatgatgat cctgggggtc gcgctctgga tgttcccccg ccccgcgaag gaggacaccc
     1141 acttcgatcc ccggctggcg gaggctgcct actggtgcct gacgctgggg acggcggcgc
     1201 gggtggtggg agagctgctc cgcccggcga gcgaggcggc cggcctccgg tggacggtgg
     1261 tgctcggcgg cgccgcccag gcactggggt tgatcctctt cttctggacg atgtggtccc
     1321 ggatccgggg ccgaccggag gccgagcgat cctgagccgg ggtcacggct ccgggaccga
     1381 gggagccgtc tcttggtcgg ccggcgcctc atccagcagg cggtagccga tgcccggctc
     1441 ggtcgtcagc aggcgcgggc gggcggcatc cggctccagc ttgtgcctca gctgcgccat
     1501 gtagacccgc aggtagtgcg tctgatccgc gtagttcgct ccccacactt cgtgcagcag
     1561 ctggcggtga gtgacgaccc ggccggcgtg gcggatgagt gcggtgagga gacgatactc
     1621 cgtgggagtc aggtgcacct cctggctgcc gcggaacacc cggcgccgca cggaatccac
     1681 ccggaggtcg cccgcctgga acaccggagc gggcggcgtc ccggccggcg tggcggcgtg
     1741 gcgaagggcg acccgcagtc gcgccagcag ctcctgcacg ccgaacggct tggtcaggta
     1801 gtcgtcggct ccctcgtcca gcgcagcgac cttgtcccgc tcctgccccc gcgccgaaat
     1861 gacgatgatc ggccggcggc tggagcggcg gatggtcctg gcgacttcca gaccgtcgcc
     1921 gtcggggagg ccgagatcga gcagcacgag gtccggattg cggccggcgg cctgggcgag
     1981 cccctcccgt gccgtcgccg cctcgactac ctgatagccg tgggcccgga gggtcgtccg
     2041 aagcagccgc cgcatctgcg gctcgtcctc gatcaccagc accagaggta gtggtgtcgc
     2101 catggctcac gcgctcccga ccggggtggc gtcggccggc tctccctgct ctgccggact
     2161 cgcgggcagg gtgggccctt ccagcggcag ggtgaaccgg aacgccgcgc ccccgccctc
     2221 gaccggctcc acccacatgc gcccaccgtg c
//
LOCUS       DASUYN010000357         2037 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1438553, whole genome shotgun sequence.
ACCESSION   DASUYN010000357 DASUYN010000000
VERSION     DASUYN010000357.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2037)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2037)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2037
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1438553"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..915
                     /locus_tag="VF061_07020"
     CDS             <1..915
                     /locus_tag="VF061_07020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669292.1"
                     /translation="GPPHVRSGRPAASHPERAAIFRLPMREHQEDSTRESVPAPGPAV
                     LPRLSLPSGRRHYLGFGLSLAFHAALLALVVFHGDALWKRTQRPGAPALFLFQGGGGG
                     GGGNRVAYITLPSPPERAPEPPAPAPPVEPPPEEIPPPVEETEVVTLSQPHPVDTLPT
                     VASADSGAAPGSSGTGPGEGDGGGGGVGGGRGPGVGPGAGEGSGPGRGGGGGVVRPPE
                     LRDLAFPFETPPKELRGASLDVTFWVRVDGRVERYEVRPAIDDRDYARKFDEVIRAFR
                     FTPARAPDGTRIAGTTRVTFTLPGKRSS"
     gene            949..>2037
                     /locus_tag="VF061_07025"
     CDS             949..>2037
                     /locus_tag="VF061_07025"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEX6669293.1"
                     /translation="MNRLFLRKSVQDCENDIVERGGLRRSLGKWHLTALGVGATIGAG
                     IFATTGTAIVGDAERLGAGPAIVLSFLLTAITCGFAALCYAEFASMVPISGSAYTYAY
                     ASLGEFVAWIIGWDLIVEYAVGNIGVAIGWSGYFRELLTHFGLALPPWLATDARTAHM
                     AAEAVAAGATDATNLYLASALTTAPEILGFNFIANLPAFLIVAFITAILVIGIRESAT
                     SNNTMVILKLAIILFFVVVGITLIRPENWSSPDLGGFAPNGFAGISAGAAIIFFSYIG
                     FDATSTAAEEAKDPGRDMPFGIIMSLVICTVVYILVAGVMTGMAPWPKLGTAEPMVTA
                     LALADGSPGLINASRFIVSLGAVFAMTSV"
BASE COUNT          267 a          744 c          699 g          327 t
ORIGIN      
        1 gggcccccgc acgtgcgttc gggccggccg gcggcgtctc accctgagcg ggccgctatc
       61 tttcgcctgc cgatgcgaga gcaccaggag gattccacgc gcgagtctgt tccagccccg
      121 ggacctgccg tcctgccccg gctgtcgctg ccgtccggac ggcggcacta cctcggcttc
      181 gggctctcac tcgccttcca cgcggcgctg ctcgcgctgg tcgtcttcca cggtgacgcg
      241 ctgtggaagc ggacccagag gccgggagcg ccggcgctct tcctctttca gggtggtggc
      301 ggcggtggcg gaggcaaccg cgtggcatat attacgctgc cttcaccgcc cgagcgggcg
      361 cccgagcctc cagcgccggc cccgccggtc gagcccccac cggaggagat cccgccgccg
      421 gtcgaggaga ccgaggtcgt caccctgtcc cagccgcacc cggtggatac gctgccgacg
      481 gtagcgtccg cggacagcgg tgcggcgccg ggctcgagcg gcaccggacc gggcgagggt
      541 gacggcggcg gcgggggtgt gggaggcggc cgcgggccgg gcgtgggtcc gggtgccggc
      601 gaggggagtg ggccgggcag gggaggcgga ggcggcgtgg tgcgcccgcc cgagctgcgc
      661 gacctcgcct tccccttcga gacgccaccc aaggagcttc gcggcgcctc gctcgacgtc
      721 accttctggg tccgggtgga cggccgcgtg gagcgctatg aggtgcggcc ggcgatcgac
      781 gaccgtgact atgcccgcaa gttcgacgag gtgattcgcg ccttccgctt cacaccggcc
      841 cgggcccccg acggcacccg gatcgccggc acgacccggg tgaccttcac cctgccaggc
      901 aagcgcagct cctgacccga tcaggctcca gacccaaaga ggatctcgat gaaccggctc
      961 ttcctccgga agtccgtgca ggactgcgag aacgacattg tggagcgagg cggcctccgg
     1021 cgctcgctcg gcaagtggca cctcaccgcg ctgggtgtgg gcgccaccat cggcgcgggc
     1081 atcttcgcca ccaccggcac cgccatcgtg ggcgacgccg agcgcctcgg tgccgggccg
     1141 gcgatcgtcc tctcgttcct gctcaccgcc atcacctgcg ggttcgccgc gctctgctac
     1201 gccgagttcg cctcgatggt gcccatcagc ggctcggcgt atacctacgc ctatgcctcg
     1261 ctgggcgagt tcgtcgcctg gatcatcggc tgggacctga tcgtcgagta cgcggtgggg
     1321 aacatcgggg tcgcgatcgg ctggtcggga tacttccgcg agctgctgac ccacttcggg
     1381 ctcgccctgc cgccgtggct cgccaccgac gcccgaaccg cccacatggc ggcggaggcg
     1441 gtcgccgccg gggccaccga cgcgaccaac ctctacctcg cctcggccct cacgacggcg
     1501 cccgagatcc tcggcttcaa cttcatcgcc aacctccccg cctttctcat cgtcgccttc
     1561 atcaccgcga ttctggtgat cgggattcgc gagtcggcca cctccaacaa cacgatggtg
     1621 atcctcaagc tcgcgatcat cctcttcttc gtggtggtgg gcatcaccct catccggccg
     1681 gagaactgga gcagcccgga tctggggggc ttcgcgccca acgggttcgc ggggatcagc
     1741 gcgggcgccg cgatcatctt cttcagctac atcggcttcg acgccacctc gacggcggcg
     1801 gaggaggcca aggaccccgg ccgcgacatg ccgttcggga tcatcatgag cctggtgatc
     1861 tgcaccgtgg tgtacatcct cgtggccggc gtcatgaccg gcatggcgcc ctggcccaag
     1921 ctcggtacgg ccgagcccat ggtgaccgcg ctggcgctgg cggacggctc gcccgggctg
     1981 atcaatgcgt cccgcttcat cgtctcgctc ggcgccgtat tcgcgatgac gagcgtg
//
LOCUS       DASUYN010000358         2074 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1879930, whole genome shotgun sequence.
ACCESSION   DASUYN010000358 DASUYN010000000
VERSION     DASUYN010000358.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2074)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2074)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2074
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1879930"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            153..875
                     /locus_tag="VF061_07030"
     CDS             153..875
                     /locus_tag="VF061_07030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669294.1"
                     /translation="MHADLVKLLDLQAKDLAVVEVERRLQALREESGVLDQALSRARE
                     GLEAARRAAVDAARRRDELEQKIESYRVLQERRQLRLEHVRNPKEASSLMAELDLARS
                     VVAKEESDWVRSSDAVTQAEFKAAEEERNVGAVAEGQTPERDRLEARRRELEAELAQA
                     RQEREDSAARLDRPLRIRYDRLRKARSGDVIVPLVGGSCGACHTSIPLNRRSQIRAGA
                     VVENCEVCGAILYPPETARSPE"
     gene            901..>2074
                     /locus_tag="VF061_07035"
     CDS             901..>2074
                     /locus_tag="VF061_07035"
                     /inference="COORDINATES: protein motif:HMM:NF013528.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DHH family phosphoesterase"
                     /protein_id="HEX6669295.1"
                     /translation="MNVSQAPIFRWVVAPRPDRDLVLQLAERLHLPEALAALLVQRGQ
                     SDVESARRYLRPALGDLSDPFILAGMAEAVDAIASAVRAGGTIMVHGDYDVDGQCATA
                     VLTRALHAAGADVVPFVPHRLRDGYDFGTAGLNAARAAGASLVITCDCGITAVETVRE
                     ARAAGIAVVVTDHHLPGDELPPAVAVVDPQLPDDISGLTHLCGTGIAFKVVQALVPAL
                     NLPVNLPYYLLDMVALATVADVVPLQGENRILVKHGLRLLGESNWPGVRALVEACGLG
                     NKEVRAGHLGFILGPRLNAAGRIGDAADGLRLLLSDNMEEATALARRLEGLNTERQAL
                     DQRILDEALGQVEQLGDLERDASFVLAAEGWHPGVVGIVASRVVERYGRPAFLIAFD"
BASE COUNT          299 a          697 c          795 g          283 t
ORIGIN      
        1 gctcgctgaa gtcgtatcct tgcggcagca cgggacgctc actgcggaaa acttcgagac
       61 agtcgtcaga gaagaacggg agataaggga ccagctctcg gcgatcttcc cggaggaact
      121 gctcaagcgc aaactgagac ggggggacct tgatgcacgc tgacctggtc aagctgctcg
      181 atctgcaggc gaaggatctg gcggtggtgg aggtggagcg gcggctgcag gcgctgcggg
      241 aggagtcggg ggtactggac caggcattga gccgggcgcg ggagggcctc gaggccgcgc
      301 ggcgcgccgc cgtggacgcc gcccggcggc gggacgagct ggagcagaag atcgagagct
      361 accgggtgct ccaggagcgg cgccagctgc ggctggaaca cgtgcggaat ccgaaggaag
      421 cctcctccct catggccgag ctggatctcg cgcgatcggt ggtggcgaag gaggagagcg
      481 actgggtccg cagctctgac gcggtgaccc aggcggagtt caaggcggcg gaggaggagc
      541 ggaacgtcgg cgcggtggcg gaggggcaga cgccggagcg ggatcggctg gaggcgagac
      601 ggcgggagct ggaggccgag ctggcgcagg cgcggcagga gcgcgaggac agcgccgccc
      661 ggctggaccg gccgctgcgg atccgctacg accggctgcg gaaggcccgc tcgggcgacg
      721 tcatcgtgcc cctggtcggc ggctcctgcg gcgcctgcca cacctccatt ccgctcaacc
      781 ggcgtagtca gattcgcgcc ggcgcggtgg tggaaaactg tgaagtgtgc ggcgcgatcc
      841 tgtacccacc tgagaccgcg aggtcgcccg agtgagctcg ccggggggta gactggcgtg
      901 gtgaacgtct cccaggcccc gatcttccgc tgggtggtcg ccccgcggcc ggaccgggac
      961 ctcgtgctcc agctggccga gcgcctgcac ctgccggagg ccctggcggc cctgctggtc
     1021 cagcggggcc agtcggacgt ggagagcgcc cgccgctacc tgcgccccgc gctgggcgat
     1081 ctgtccgatc cgttcatcct ggcgggcatg gcggaggccg tggacgccat cgcctccgcg
     1141 gtccgcgcgg gcggcaccat catggtccac ggcgactacg acgtggacgg ccagtgcgcc
     1201 accgccgtgc tcacccgcgc gctccacgcc gcgggcgcgg acgtggtgcc attcgtgcct
     1261 caccggctgc gcgacggcta cgacttcggc accgccggcc tcaacgccgc ccgggccgcg
     1321 ggcgcctcgc tggtcatcac ctgcgactgc ggtatcaccg cggtggagac ggtgcgggag
     1381 gcgcgcgccg cgggcatcgc cgtcgtcgtc accgatcacc acctgccagg cgacgagctg
     1441 ccgcccgccg tcgcggtggt ggacccccag ctcccggacg acatctcggg actcacccac
     1501 ctctgcggca ccggcatcgc cttcaaggtg gtgcaggcgc tggtgccggc gctgaatctt
     1561 ccggtcaacc tgccctacta cctgctcgac atggtggcgc tcgccacggt ggcggacgtg
     1621 gtgccgctcc agggcgagaa ccggatcctg gtcaagcacg gtctccggct cctcggcgag
     1681 agcaactggc ccggcgtccg ggcgctggtc gaagcctgcg gcctcggcaa caaggaggtc
     1741 cgcgccggcc atctcgggtt catcctgggc ccgcggctca acgcggcggg ccgcatcggc
     1801 gacgcggcgg atgggctccg gctcctgctc agcgacaaca tggaggaggc gacggccctg
     1861 gcccggcggc tggaagggct caataccgag cgccaggcgc tcgaccagcg gatcctggac
     1921 gaggcgctcg gtcaggtgga gcagctcggc gacctggagc gggacgcgag cttcgtcctg
     1981 gcggccgagg gctggcatcc gggagtggtg ggcatcgtgg cgtcgcgagt cgtggagcgc
     2041 tacggccgcc cggcgttcct catcgccttc gacg
//
LOCUS       DASUYN010000359         3013 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_998609, whole genome shotgun sequence.
ACCESSION   DASUYN010000359 DASUYN010000000
VERSION     DASUYN010000359.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3013)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3013)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3013
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_998609"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1592
                     /locus_tag="VF061_07040"
     CDS             <1..1592
                     /locus_tag="VF061_07040"
                     /inference="COORDINATES: protein motif:HMM:NF015706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="EF-Tu/IF-2/RF-3 family GTPase"
                     /protein_id="HEX6669296.1"
                     /translation="LVRMRSLEWVGDLTGAMFLDVEIPAEKLAEAKAARQQMIESLAE
                     VDEEILALFVEGADIPAAHLKAALRRATVAGKAVPVLYGAAFKNKGVQPLLDAVVDYL
                     PAPSDLPPVEAHRPDGSRISVKASDDEPFTALAFKIMNDSYVGQLTYLRVYSGRVESG
                     QAVYNATKGKRERIGRLLHMHANKKEDVREAVTGSIAAAVGLRVTTTGDTLCDLKSPV
                     VLDVMEFPPPAMSVVIEPKTQAGQDELGGALEKLAAEDPSFRVSTDGETGQTLISGMG
                     ELHLEILVDRLVREFKVEANVGRPQVAYREGITRTATRAETFVHDAAGRGQFAQVTVQ
                     LEPLRDAMSAGSAGPGARPASGQILFENALPAGTLPKEFIAAVERGIRGALGRGPLAT
                     YPVIDVKATLVRATMHAVDSNEAAFQIAGSQATSAALREAGPVLLEPVMALDVVSPED
                     FTGAIVGNLASRRGRILGLEARGDAQAISAEVPLGTMFGYSTDVRSLTQGRATFTMQF
                     LRYAPVPAQVSESIVNRVRGA"
     gene            1606..2802
                     /gene="tuf"
                     /locus_tag="VF061_07045"
     CDS             1606..2802
                     /gene="tuf"
                     /locus_tag="VF061_07045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003640798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HEX6669297.1"
                     /translation="MAKEKFVRNKPHLNVGTIGHVDHGKTTLTAAITKVLAKKGGAKF
                     LAYDQIDKAPEERERGITIAIAHVEYETDNRHYAHVDCPGHADYIKNMITGAAQMDGA
                     ILVVSAPDGPMPQTREHILLGRQVGVPAIIVYLNKVDMVAKEDAELLDLVELELRELL
                     SKYQYPGDKTPIVRGSALKALEGDAGELGEPSVMALMAALDSFIPEPKREIDKPFLMP
                     VEDVFTISGRGTVVTGRVERGIIKVGEEIEIIGIKDTTKTIVTGVEMFRKLLDEGRAG
                     DNIGALLRGVKREEIERGQVLAKPGSITPHTKFKGEVYVLSKEEGGRHTPFFTGYRPQ
                     FYFRTTDVTGVATLPSGVEMVMPGDNTQVDVELITPIAMEKGLRFAIREGGRTVGAGT
                     VTEIIE"
     gene            2830..>3013
                     /gene="rpsJ"
                     /locus_tag="VF061_07050"
     CDS             2830..>3013
                     /gene="rpsJ"
                     /locus_tag="VF061_07050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014268624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HEX6669298.1"
                     /translation="MLNEKIRIRLKAYDYRILDQSTTESVDTAKRTGARVAGPIPLPT
                     LKNRWTVNRSPHVDKKS"
BASE COUNT          549 a          953 c         1085 g          426 t
ORIGIN      
        1 acctcgtccg catgcgtagc ctggaatggg tcggcgatct gaccggggcg atgttcctgg
       61 acgtggagat cccggctgag aagctggccg aggccaaggc cgcccggcag cagatgatcg
      121 aatcgctggc cgaggtggac gaggagatcc tggcgctgtt cgtggaaggc gcggacatcc
      181 ccgccgccca cctgaaagcg gccctgcggc gggcgaccgt cgccggcaag gcggtgccgg
      241 tgctgtacgg cgcggccttc aagaacaagg gcgtgcaacc gctgctggat gcggtggtgg
      301 attacctgcc ggccccgtcc gatctgccgc cggtcgaggc ccaccgcccc gacggcagcc
      361 gcataagcgt gaaggccagc gacgacgagc cgttcaccgc gctggcgttc aagatcatga
      421 acgactccta cgtcggccag ttgacctacc tgcgggtcta ctcgggccgg gtggagagcg
      481 gccaggccgt ctacaacgcc accaagggca agcgcgagcg catcgggcgc ctcttgcaca
      541 tgcacgccaa caagaaggag gacgtgcgtg aggcggtcac cggcagcatc gccgccgccg
      601 tcggactgcg ggtgacgacg accggggaca cgctgtgcga cctgaagtcg ccggtggtgc
      661 tggacgtgat ggagtttccg ccgccggcga tgtcggtggt gatcgagccc aagacccagg
      721 ccggccagga cgagctcggc ggggcgctgg agaagctggc cgccgaggac ccgagcttcc
      781 gcgtgtcgac cgacggcgag acgggccaga ccctcatcag cggcatgggc gagctgcacc
      841 tggagatcct ggtcgaccgc ctggtgcgcg agttcaaggt cgaggccaac gtcggccgcc
      901 cgcaggtggc ctaccgcgag ggcatcaccc gcaccgccac cagagcagag acgttcgtgc
      961 acgatgccgc cggccggggt cagttcgccc aggtgacggt gcagctggaa ccgctgcgcg
     1021 acgccatgtc agccggatcg gcaggccccg gtgcccgacc ggcatcgggg cagatcctgt
     1081 tcgagaacgc cctgccggcc ggcaccctgc ccaaggagtt catcgccgcg gtcgagcggg
     1141 gtattcgagg ggccctgggg cgcgggccgc tggccaccta cccggtgatc gatgtgaagg
     1201 cgacgctggt gcgggccacc atgcacgcgg tcgattccaa cgaggccgcg ttccagatcg
     1261 ccggttcgca ggcgacctct gcggctctgc gcgaagccgg tccggtcctg ctcgagccgg
     1321 tgatggcgct cgacgtggtc tcgcccgagg acttcacggg ggccatcgtg ggcaacctcg
     1381 cgtcgcgtcg gggtcgcatc ctgggactcg aggctcgggg ggatgctcag gccatctctg
     1441 ccgaggttcc cctgggcaca atgttcgggt attccaccga cgttcgttcc ttgacccagg
     1501 gacgagcgac gttcacgatg cagttccttc gttacgctcc ggttcccgcc caggtcagcg
     1561 agtccatcgt aaaccgggtt cgaggcgcct agaggaggac gacccatggc caaagaaaaa
     1621 ttcgtacgga acaagccgca cctgaacgtg gggacgatcg gccacgtgga ccacggcaag
     1681 acgaccctga ccgcggcgat caccaaggtg ctggcgaaga agggcggggc gaagttcctg
     1741 gcctacgatc agatcgacaa ggcgccggaa gagcgcgagc gcggcatcac gatcgcgatc
     1801 gcccacgtgg agtacgagac ggacaaccgt cactacgcgc acgtcgactg cccggggcac
     1861 gccgactaca tcaagaacat gatcaccggg gcggcccaga tggatggggc gatcctggtg
     1921 gtgtctgcgc ccgacggccc gatgccgcag acgcgagagc acatcctgct gggccgccag
     1981 gtcggcgtcc ctgcgatcat cgtctacctg aacaaggtgg acatggtggc caaggaagac
     2041 gcggagctgc tcgacctggt cgagctggag ctgcgcgagc tgctgtccaa gtaccagtac
     2101 ccgggcgaca agacgccgat cgtgcgcggc agcgcgctca aggcgctgga aggcgacgcg
     2161 ggggagctgg gcgagccgtc ggtgatggcg ctgatggcgg cgctggacag cttcatcccg
     2221 gagccgaagc gggagatcga caagccgttc ctgatgccgg tggaagacgt gttcaccatc
     2281 tcgggccgtg gcacggtggt caccggccgg gtggagcgcg ggatcatcaa ggtcggtgag
     2341 gagatcgaga tcatcgggat caaggacacg accaagacga tcgtcacggg cgtggagatg
     2401 ttccgcaagc tgctggacga aggtcgcgcc ggcgacaaca tcggggcgct cctgcgtggc
     2461 gtgaagcgcg aggagatcga gcgcggccag gtgctcgcca agcccggctc gatcacgccg
     2521 cacacgaagt tcaagggcga ggtgtacgtg ctgtccaagg aagagggcgg ccgtcacacg
     2581 ccgttcttca cgggctaccg cccgcagttc tacttccgga ccacggacgt gacgggagtg
     2641 gcgacgctgc cgtcgggagt ggagatggtg atgccgggcg acaacacgca ggtggacgtg
     2701 gagctgatca cgcccatcgc catggagaag ggcctgcgct tcgccatccg cgagggcggc
     2761 cgcacggtcg gcgccggcac cgtcaccgag atcatcgagt agccggtcgg ggagagggac
     2821 acgtcaatga tgttgaacga gaagatccgg atccggttga aggcgtacga ctaccggatc
     2881 ctggaccagt cgaccacgga gagcgtcgac accgccaagc gcaccggcgc gcgggtggcg
     2941 ggtccgattc cgctgcccac gctgaagaac cgctggacgg tgaaccgatc gccgcacgtc
     3001 gacaagaaga gcc
//
LOCUS       DASUYN010000360         3131 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1219251, whole genome shotgun sequence.
ACCESSION   DASUYN010000360 DASUYN010000000
VERSION     DASUYN010000360.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3131)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3131)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3131
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1219251"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..339)
                     /locus_tag="VF061_07055"
     CDS             complement(<1..339)
                     /locus_tag="VF061_07055"
                     /inference="COORDINATES: protein motif:HMM:NF014453.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HEX6669299.1"
                     /translation="MAPTPARVRVSGAQAVVEVVQELAAHRAMNVLIAAIALFVALPL
                     LLLIAVAIRLTSRGPVLYTQERVGLDRRVSGTKPEQSRRTRDLGGQPFTIYKFRTMRV
                     DAEAQSGAVWA"
     gene            1154..2110
                     /locus_tag="VF061_07060"
     CDS             1154..2110
                     /locus_tag="VF061_07060"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX6669300.1"
                     /translation="MANRDKAPTAPLVLIANDQEWSARSLESILGPSGYSVVRAYTGQ
                     QALERARTSQPDLIILDAQMPDMHGFEVCRSLRSDPRFSATTPIVITTSGPSGRTQRL
                     EAYRAGAWEFLGQPLDGEALLLKLNTFLQCKREVDGLREENLLDPGSGLYNMRGLSRR
                     AREIGAEAFRRRDPVACVVFAPDLDEGDEEETPEDEARRMSDQVALLFRQAGRASDAI
                     GRLGMAEYGVIAPATGPEAAVRLARRLGGAVESSPIPVRGGERTLRLRAGYCAVADFA
                     ESSVDAVELLLRATTALRDLRREGQTGERIRAFEQVPTRFAN"
     gene            2329..>3131
                     /locus_tag="VF061_07065"
     CDS             2329..>3131
                     /locus_tag="VF061_07065"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HEX6669301.1"
                     /translation="MANPLAQSERGNAQSPDAPRDPLSIPAEIKASIRVLVVDDERTL
                     RESCASVLQMDGYNVTLVGRGEEALETVKRRKFDIILVDLYMSQISGLEILQAALAAY
                     KDTIVVVMTGNPSVTSSIEALRAGAWDYLPKPFSATHLQVLIGRASHAVMMAREAQDL
                     RVQLMRQHGHSEKIALIGISPLFRKAVDLARKVAATDASVFISGESGTGKEVIAQFIH
                     QNSRRAARPLVPINCAALPEPLLESEMFGHRKGAFTGADRDKPGLLETA"
BASE COUNT          528 a         1078 c         1031 g          494 t
ORIGIN      
        1 ggcccacacc gcgccgctct gggcctcggc gtccacccgc atcgtccgga acttgtagat
       61 cgtgaacggc tggccgccaa gatcccgggt gcggcgcgat tgctccggct tggtgccgga
      121 gacccgccgg tcgagcccga cacgctcctg ggtatagagg acgggtccgc gggacgtgag
      181 ccggatggcg acggctatga gcaggaggag gggcagcgcc acgaagagcg cgatcgccgc
      241 gatcagcacg ttcatcgcac ggtgcgcggc cagctcctgg accacttcga cgaccgcctg
      301 cgcgcccgac acgcgcaccc gcgcgggcgt cggcgccatc gaacccgtca acaattgggg
      361 ggatggctgt cgccgaggcc ccgaggtggc tatgcccatg atgtcccttg tcacgcccga
      421 ggggcgccgg tcgcgttccg gtaatcgcgc gcgctccggc tcacgctaac aaaagcgctt
      481 cggaatccct gtgacgcgtc tcacttcgac ctgctagccg gtcgagcctc ggccggccga
      541 gtgtttggtc ggacggagaa tcggatcggt cagctcgccg agcccgaagc gggccagcaa
      601 gcggctgaat cgcgagcgtt cgatgcgaag ctcagcggag gggcggggtt caccatcatc
      661 gccgccgacg ccggggggcg catcctgccg tgcctgggtg tcgagcgcgg gtcgctgagc
      721 catgctgaac cattcgtgca gggtttggca ctgccggacg gagcatcaag agcatgattc
      781 aataatgacg ccgcaaaaac ttgctcggcg accgggctga caacctgtcg agatctggat
      841 atctaagccc ctatgatata caatgttact atctcatgcc agggtccgca tcgccgggcc
      901 tcctctcccg gccgcgttgc tcacagacca cagcttggat gcgtccttcc atcacgggcc
      961 gggggcgtgc caaacgtggc gcgccagcat ccaaactgtt gcaccactcc tgctattcgg
     1021 gtcgggacgg cgctggatgg tcacgtcaac tcacggtggc acatgcgctt atgttttcat
     1081 ttcaagcctg cacgactcct gcggttgcca agtcgtccaa cccgtccgcc gtccctagac
     1141 cccggctccc tcaatggcaa atcgagataa ggctcccacc gcgccgctgg tcctgatcgc
     1201 gaacgatcag gaatggtcgg cgcgttctct ggagagcatc ctcgggccca gcggctactc
     1261 ggtggtgcgg gcttacaccg gccagcaggc gctcgaacgg gcgaggacct cccagccgga
     1321 cctgatcatc ctcgatgccc agatgccgga catgcacggc ttcgaggtgt gccgctcact
     1381 tcggagcgac cccagattca gcgccaccac gcccatcgtg atcaccacct ccggtccttc
     1441 cggtcggact cagcgactgg aagcctaccg ggccggcgcg tgggagttcc tggggcagcc
     1501 gctcgacggc gaggcgctgc tgctcaagct gaacacgttt ctccagtgca aacgcgaggt
     1561 ggacggcctg cgagaggaga acctgctcga tccgggcagc ggactctaca acatgcgcgg
     1621 cctctcccgc cgggcccgcg agatcggcgc ggaggccttc cgccggcgcg atccggtggc
     1681 ctgtgtggta ttcgcgcccg acctcgacga aggggacgag gaagagactc ccgaggacga
     1741 ggcgcgccgg atgtcggacc aggtggcgct gctgttccgc caggccggcc gcgcgtccga
     1801 cgcgatcggc cggctgggaa tggcggagta cggagtgatc gctccggcga ccggtcccga
     1861 ggccgccgtg cgcctggcgc gccggctcgg cggtgccgtc gagtcgtccc cgattcccgt
     1921 gcgcggcggg gaacgcacgc tccgcctccg ggccggctac tgtgcggtgg cggatttcgc
     1981 ggagtcatcg gtggacgcgg tggagctcct gctccgagcg accaccgcct tgcgtgacct
     2041 cagaagggag ggtcagaccg gcgaacggat ccgcgccttc gagcaggttc ccaccagatt
     2101 cgcgaattag gccgcctaag tgtaggggca gaaccacgat gtcagtctga aacggccctg
     2161 ccaccgtggc ggtgctgcat cactcgtgct tgacaaatgc cgcagtctgt ggtataaaag
     2221 acactccaca tacatcgcgg gctgcccccc tggcccgtcc aggcagcacc gaccccactt
     2281 tcccacggga gagtggccga cgtctgtcca cctgaccagg agtgccggat ggccaacccg
     2341 ctcgcgcagt cggagcgcgg caacgcccag tcgccggacg cgcctcgcga tcccctgtcc
     2401 atccccgccg aaatcaaggc gagcatccgc gtgctcgtgg tggacgacga gcgcaccctc
     2461 cgggagagct gcgccagcgt tctccagatg gacggctaca acgtcaccct ggttggccgg
     2521 ggcgaggagg cgctggagac ggtcaagcgc cgcaagttcg acatcatcct cgtggacctg
     2581 tacatgtccc agatctccgg attggagatc ctccaggccg cgctggccgc gtacaaggac
     2641 acgatcgtgg tggtgatgac cggaaacccc agtgtcacca gcagcatcga ggcgctccgc
     2701 gccggggcct gggactacct gccgaagccg ttctccgcca cccacctcca ggtgctgatc
     2761 gggcgtgctt cccacgcggt catgatggcg cgcgaggcgc aggacctccg cgtgcagctg
     2821 atgaggcagc acgggcacag cgagaagatc gccctcatcg gcatctcccc gctctttcgc
     2881 aaggcggtcg atctggcccg gaaggtcgcg gccaccgacg cgtccgtctt catcagcggc
     2941 gagagcggca ccgggaagga agtcatcgcc cagttcattc accagaacag ccgccgcgcc
     3001 gcccggccgc tggtgccgat caactgcgcc gcgctccccg agccgctcct cgagagcgag
     3061 atgttcggcc accggaaggg cgccttcacc ggggccgacc gcgacaagcc gggcctgctg
     3121 gagaccgcca a
//
LOCUS       DASUYN010000361         2502 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_999336, whole genome shotgun sequence.
ACCESSION   DASUYN010000361 DASUYN010000000
VERSION     DASUYN010000361.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2502
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_999336"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..352)
                     /locus_tag="VF061_07070"
     CDS             complement(<1..352)
                     /locus_tag="VF061_07070"
                     /inference="COORDINATES: protein motif:HMM:NF013073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HEX6669302.1"
                     /translation="MLATADQYVGTRYRYGGESPAEGFDCSGFVQFVYGRHGVELPRV
                     SYQQARAGRAAPRGIAALQPGDLMFFAAGGGRVDHVAIYAGDGRVIHATSGAGSVRYD
                     DLDTDRGEWLLRRFV"
     gene            complement(810..1673)
                     /locus_tag="VF061_07075"
     CDS             complement(810..1673)
                     /locus_tag="VF061_07075"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF015998.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX6669303.1"
                     /translation="MSVSHPVARTAFYCCILRADDAASPRPVCGDALAARFVDDEVRR
                     GLEAPLRHRAPAASNVARHRLIDDLVRRRLAEDTATRIILLGAGFDTRAFRMSGGRWW
                     EIDDPALLAFKEERLPAAGAPNPLVRIPVSFQTESLAEHLAPLGGNDRALVIVEGVTM
                     YLADETLAELARAVRSAFPHGTLICDLMTPGFARTFGRRLRRDLARLGADFRRRRGHP
                     RRIVERAGYAARERHSIVGRAREAGTFRIPGWVFHTVLRGLRDGYAVWVFEPGTAGAG
                     STSSAGAAGSG"
     gene            1796..1951
                     /locus_tag="VF061_07080"
     CDS             1796..1951
                     /locus_tag="VF061_07080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669304.1"
                     /translation="MRVRPECASLYPELVPGVWMSATRAAQIIRQADPAQQRVHDCSL
                     PQDRALS"
     gene            complement(1969..2217)
                     /locus_tag="VF061_07085"
     CDS             complement(1969..2217)
                     /locus_tag="VF061_07085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669305.1"
                     /translation="MARRKARLRPEYAAWYPHLVAGEWQDAGWAAEKVLQQHREESCP
                     WSLGRRTLSEAHFEFEGGDYKPPEGRERRISPSYLDRA"
BASE COUNT          393 a          922 c          844 g          343 t
ORIGIN      
        1 tgacgaaccg cctcaggagc cactcccccc gatccgtgtc gaggtcatcg tagcgcacgc
       61 tccccgcgcc cgaggtcgcg tggatgaccc gcccgtcccc ggcgtaaatc gccacgtgat
      121 cgacgcgccc gccccccgcg gcgaagaaca tcaggtcacc gggctgcagg gcggcgatcc
      181 cgcgaggcgc cgcccgtccc gctctcgcct gctggtatga cacgcgcggc agctccacgc
      241 catgacgccc gtagacgaac tgcacgaacc cggaacagtc gaaaccctcc gccgggctct
      301 cgccgccgta acggtagcga gtgccgacgt actggtcggc cgtagccagc acccgagccg
      361 cgctcgtcga cacgggtgcg cctgacgagc tccaccgccc gccgcccggg gcagccgcgc
      421 cgctccccac gtcgacgccg accccccgac cactcagggt tcccgcgatg tctaccgggc
      481 cgatggtggc acggacggcc ggcccccggg agggtgacac gtccagaccc acacgggctc
      541 ccgcgcaccc ggggagtgtc cccagcgtca gcaggaaccc gaggtagcgc gtggcaagtg
      601 gacggtgttg gcggaaagtg gacatgctgg aatacatcgg gcggtcctcg gtccggcgca
      661 cctgcgaagc cggctcgcgc cagcctcggt gccgcgtata tggcctgtca gcgggcgtct
      721 cgacgggccg aacgcccgcc gattaccgcg agactcgccg caggggcaga aaccgtgcca
      781 aatgccggcc tacgggacgt acatctcgtt caccctgagc ccgccgcacc cgccgatgac
      841 gttgagcctg cccccgcagt tcctggctcg aacacccaca cggcataccc gtcccgcagc
      901 ccccgcagaa ccgtgtggaa cacccaaccc ggaatccgga acgtccccgc ctcccgggcg
      961 cggcccacga tggagtgccg ctcgcgggcg gcatagccgg cccgctccac gatccgccgc
     1021 gggtgcccgc gccggcgccg gaagtcggcg ccgagtcgcg cgaggtcgcg gcgcaggcgc
     1081 cggccgaacg tccgcgcgaa gcccggcgtc atgagatcgc agatcagtgt cccgtgcggg
     1141 aaggcggagc ggaccgcccg cgccagctcg gcaagggtct cgtccgccag atacatcgtc
     1201 acgccctcca cgatcacgag cgcgcgatcg ttcccgccga gcggcgccag gtgctcggcc
     1261 aggctctcgg tctggaacga gacgggtatt cgcaccagtg ggttcggcgc cccggccgcg
     1321 gggaggcgct cctccttgaa ggcgaggagc gccgggtcgt cgatctccca ccagcggcct
     1381 ccgctcatcc ggaaggcccg ggtgtcgaag ccggcgccga gcaggatgat ccgtgtcgcc
     1441 gtgtcctcgg cgagccggcg gcgaaccagg tcgtcgatga gccggtggcg ggcgacgttg
     1501 ctggcggcgg gtgcccggtg gcggagcggc gcttccagcc cgcggcgcac ctcgtcgtcc
     1561 acgaagcggg cggcgagcgc atcgccgcag accggccggg gcgacgcggc atcgtcggcc
     1621 cggaggatgc agcagtagaa ggcggtgcgc gctaccggat gagagacgga catcggatca
     1681 gctcgtcggt gaagggtgcc cagctcgtcg ggaggcgagg gcgagcagga tggacgcgtg
     1741 acgcatggaa gcgtcgtttc agcacagaag ccatggatct cttcatcgct cgcgcgtgcg
     1801 cgtgcgcccc gagtgcgcct cgctctaccc cgagctggtg ccgggggtgt ggatgagcgc
     1861 caccagggct gcccagatca tccggcaggc cgaccccgcg cagcaacggg tgcacgactg
     1921 tagcctgccg caggatcgag cgctgagctg acgtcgggct gtgctcggtc aggctcgatc
     1981 gaggtagctc ggggagatcc gtcgttcgcg gccctccggc ggcttgtagt ctcctccctc
     2041 gaactcgaaa tgggcctcac tcagggttcg cctccccagg ctccagggac acgattcctc
     2101 ccggtgctgc tgaagcacct tctccgcggc ccaacccgcg tcctgccact cgccggcgac
     2161 caagtgggga taccacgctg cgtattccgg tcgcaggcga gccttgcgtc gagccatgtg
     2221 cctctcccgc ccgaggggat caccgtgaag gtgccgcgcc aacactaccc aatccgtgag
     2281 acccctcact aatagtggcg tggttgaaga cataggagga tccatgagag tctggccccc
     2341 ttccatcatt ctgctcgccg cactctgcac caccgccgga gcccagacac ctgccgcccg
     2401 gcgtgcgatc tcctggaagg ctgagagcta tggcacaacc ggcacctgca ccttcacggg
     2461 caacgccctc gagcggcagg tcgtcgtgct cacggtcgcg ag
//
LOCUS       DASUYN010000362         2311 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_338050, whole genome shotgun sequence.
ACCESSION   DASUYN010000362 DASUYN010000000
VERSION     DASUYN010000362.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2311
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_338050"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1650
                     /locus_tag="VF061_07090"
     CDS             <1..1650
                     /locus_tag="VF061_07090"
                     /inference="COORDINATES: protein motif:HMM:NF023459.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEX6669306.1"
                     /translation="RMTPLDLTLARTAADPQELKVTSYARQRREEAVTAGRAAELEGD
                     GRAHPQAAPAARDVLRRWSPAHQPMNTENYAVIEESRFLPAGTNPRSTFSIDVDAASY
                     TNVRRFLSSGQRPPRDAVRIEEFLNYVRYDYPEPGGRDRFSVTTDLAVAPWAPEHRLL
                     RIGIKGRSLRTEAVPPSNLVFLLDVSGSMQPPDKLPLVKQAFRLLVQELRPQDRVAIV
                     VYAGAAGLVLPSTPGSDKATILAALDRLEAGGSTAGGAGLRLAYEVAKQHYEREGNNR
                     VILASDGDFNVGESSDAAMVRLIEERRDQGIFLTVLGFGTGNLKDSRMEQIADKGNGH
                     YAYVDNLTEARRVFVREFAGTLVTIAKDVKIQVEFNPAKVAAYRLVGYENRALRNEDF
                     ADDRKDAGELGAGHTVTALYEIVPAGASFAGTGGDLDDLKYQTVQIRPGASSGDEWLT
                     VQLRYKEPDGATSRLLTHPVRVRRPAAQPAGDFRFAAAVAAFGLVLRDSEYRGTATLD
                     QVLQLARGSEGRDPEGERAEFVRLVESARLLSGIESEGGGL"
     gene            complement(1647..>2311)
                     /locus_tag="VF061_07095"
     CDS             complement(1647..>2311)
                     /locus_tag="VF061_07095"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024967.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX6669307.1"
                     /translation="DWQAAAARIATLGLTPESGMNPGDRRALYYLVRHLRPGSVLEIG
                     TQAGASTVHLAAGLADIHGAAEPRLVTADIKDVNDGEQAAWRAFGLPQPPAEAMRRLG
                     YDRLVEFRMGRSLDVLGDSVECYDLIFLDGDHRLRTVAAEIPLALGRLRPGGLLLLHD
                     FFPGLRPLWPDGKVIDGPQLAVRRLRQAGWPLEVLPLGELPWPTKLGTSRTSLALLGR
                     AA"
BASE COUNT          360 a          815 c          820 g          316 t
ORIGIN      
        1 cgcatgacgc cgctcgatct gaccctggcg cggacggccg cggaccctca ggagctgaag
       61 gtcaccagct acgccaggca gcggcgggaa gaggccgtca ctgccggccg cgcggccgag
      121 ctcgagggtg atgggcgggc gcatccgcag gcggctccag cggcacgcga tgtcctccgg
      181 cggtggtcac cggcccacca gccgatgaat accgagaact acgcggtcat cgaggagtcg
      241 cgctttctcc ccgccggcac caacccgagg tccaccttct ccatcgacgt ggacgccgcg
      301 agctacacca acgtgcggcg cttcctcagc tcggggcagc ggccgcccag ggatgccgtc
      361 cggatcgagg agttcctgaa ctacgtccgc tacgactatc ccgagcccgg cggcagggac
      421 cggttcagtg ttacgaccga tcttgcggtg gctccctggg cgcccgagca ccggctgctc
      481 cgtatcggca tcaagggccg ctcgctccgg accgaggcgg tacctcccag caatctggtc
      541 ttcctgctgg acgtttccgg ttccatgcag cctccggaca agctgccgct ggtgaagcag
      601 gcgttccggc tcctggtcca ggagctccgg cctcaggacc gcgtcgccat cgtggtgtac
      661 gccggagcgg ccgggctggt gctgccctcg acgcccggct cggacaaggc caccatcctc
      721 gccgccctcg accggctgga ggccggcggg tccacggccg gcggcgcggg gctgcggctg
      781 gcctacgagg tggcgaagca gcactacgag cgtgagggca acaaccgggt catcctcgcc
      841 agcgacggcg acttcaacgt gggtgagagc tccgacgcgg cgatggtgcg gctgatcgag
      901 gagcgccgtg accaggggat cttcctcacc gtgctcggct tcggcaccgg caacctgaag
      961 gacagccgga tggagcagat cgcggacaag gggaacgggc actacgccta cgtcgacaac
     1021 ctcaccgagg ccaggcgggt cttcgtgcgg gaattcgcgg gcaccctggt caccatcgcc
     1081 aaggacgtga agatccaggt cgagttcaac ccggcgaagg tggccgcgta ccggctggtc
     1141 ggctacgaga accgcgcgct gcgcaacgag gacttcgccg acgaccgcaa ggacgccggc
     1201 gagctcggcg cgggacacac ggtgacggcc ctctacgaga tcgtccctgc gggcgcctcg
     1261 ttcgccggca ccggcggcga cctcgacgac ctcaagtatc agaccgtgca gattcggccc
     1321 ggtgcctcca gcggtgacga atggctcacg gtacagctgc gctacaagga gccggacggt
     1381 gccaccagcc ggctgctgac ccacccggtg cgggtgcggc gaccggctgc tcagcccgca
     1441 ggcgacttcc ggttcgccgc agccgtggcc gcattcggcc tggtgctgcg cgactccgag
     1501 taccgcggga cggcgaccct cgaccaggtc ctgcaactgg cccgcgggtc ggaagggagg
     1561 gaccccgagg gtgagcgcgc ggagttcgtg cgcctggtcg agtcggccag gctgctctcc
     1621 ggcatcgagt ccgagggagg cggtctctag gccgcgcggc cgagcagcgc gaggctggtc
     1681 ctcgaggtgc cgagcttggt gggccaggga agttcgccca gcggtagcac ctcgagcggc
     1741 cagccagcct gccgcagccg ccggactgcc agttgcgggc cgtcgatcac cttaccgtcg
     1801 ggccacagcg ggcggagtcc ggggaagaag tcgtgcaaca agaggagccc gccaggccgg
     1861 agacggccga gcgcgagggg gatctcggcc gccaccgtcc tcaagcggtg gtcgccgtcg
     1921 aggaagatga ggtcgtagca ctcgaccgag tcccccagta catccagcga gcgccccatc
     1981 cggaactcga ccagccggtc gtagcccagt cgccgcatcg cctccgccgg aggctggggc
     2041 aggccgaacg cacgccacgc cgcctgctct ccatcgttca cgtccttgat gtccgccgtg
     2101 accagccgcg gctccgctgc accgtggatg tccgcgagcc cggcggcgag gtgcacggtg
     2161 gaggcgcccg cctgggtgcc gatctcgagc acactccccg gtcggaggtg ccgcaccagg
     2221 tagtagagag cgcgccggtc accggggttc atccccgact cgggggtgag gccgagggtc
     2281 gcgatccgcg ccgccgccgc ctgccagtcg c
//
LOCUS       DASUYN010000363         3151 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1219959, whole genome shotgun sequence.
ACCESSION   DASUYN010000363 DASUYN010000000
VERSION     DASUYN010000363.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3151)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3151)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3151
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1219959"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..331)
                     /locus_tag="VF061_07100"
     CDS             complement(<1..331)
                     /locus_tag="VF061_07100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669308.1"
                     /translation="MRTRKLDHEGVFAWIMPVVVAGLLAACGGGDAGAGGGAGETAGG
                     TGAGTPAGGAGAEAPAGGAGAEAPPPAAGGGGASALVALGDSVFHGQAGGGTCYVCHG
                     QDGKGSGV"
     gene            complement(428..1906)
                     /locus_tag="VF061_07105"
     CDS             complement(428..1906)
                     /locus_tag="VF061_07105"
                     /inference="COORDINATES: protein motif:HMM:NF012544.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEX6669309.1"
                     /translation="MAAPAQSAPATSPPTEFVRGIGPLAAISLVVGSMIGSGIFIVSA
                     DIGRQVSPWGPGGLLLVWVVTGLVTVVGALSYAELAAMMPKAGGQYVFLREGLSPSAG
                     FLYGWTLFAVIQTGTIAAVAVAFARFLSVLVPAVSPDVFLPLGQLRLPGAAEAIQLGL
                     SPQRVVAILSILLLTWINGRGVRLGASIQTVFTVAKTGALAVLVICGLTLFRQPAVAA
                     GNFADFWGTGDWTLAMIPLVGAAMVGSLFSSDAWNNVTFAAAEVQNPSRNLPIALAVG
                     TGLVSLLYVLTNVAYLNVLPFYGDANGADALARGIQHASQDRVGTAAIEVALGGAAAA
                     VMAVAILLSTFGCNNGLILAGPRVYWAMARDRLFFQRAGVLHREHHTPVFGLWAQAAW
                     ASVLCISGTYGQLLDYVIFAALVFYFLTTLALFRLRRLRPDLPRPVKAFGYPVLPGLY
                     LLAVGALMLILLFEKPLYTWPGLLIVATGIPVYLVWRGRQTD"
     gene            complement(1996..2358)
                     /locus_tag="VF061_07110"
     CDS             complement(1996..2358)
                     /locus_tag="VF061_07110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669310.1"
                     /translation="MNDLLKQRIARALDALSDERGYQILDYIEFLESKYAERARPGGL
                     FARITETVEDTMRAGKLPIQAISGTMGLVDGAAKVMKGLAAAGQAVVDEAVKAAEDVK
                     QPAVPETDPDTSTKRLSP"
     gene            complement(2363..>3151)
                     /locus_tag="VF061_07115"
     CDS             complement(2363..>3151)
                     /locus_tag="VF061_07115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669311.1"
                     /translation="SEEGENLRGAPNGPIVGRAREGTLLERVGERGKWFRVRRDGWVP
                     REAVPGRQAASQRAADTTRRRPARSQQPGQAAAPAAPPPAPAPAAGIEGVVTLRETGL
                     SRAPDSSAIATLPPGTAGRVVGRSGEWVRVQVEGWVRDADVKPAESGVLGGISAAEVR
                     ASPDRFVGQTLDWRLQVIAVQIADELRPEMPSGQPYLLTRGPLPEPGFVYVMLPPGRV
                     AEFRALPPLHELTLRVTLKAARTRYLATPVAERVSTPGLARAGE"
BASE COUNT          463 a         1156 c         1133 g          399 t
ORIGIN      
        1 ccaccccgga ccccttgccg tcctgaccgt ggcagacgta gcaggtgccg cctccggcct
       61 ggccgtggaa gacgctgtcg cccagggcga caagggccga tgccccgcca ccaccggcgg
      121 ccggcggcgg cgcctcggcc cccgcacctc cagccggcgc ctccgccccc gcgcctccgg
      181 ccggggtccc ggctcccgtg ccgccggccg tctccccggc accgccaccc gctccggcgt
      241 caccgccgcc gcaggctgcc agcagtccgg cgaccaccac cggcatgatc caggcgaaga
      301 ccccctcgtg atcgagcttg cgtgtgcgca tgcgctgccc tccgcgctga tgtccagtgc
      361 cgtgcccttc cggcacggcc gtgggtcacg gtagggccgg aagctcaccg cgtctgtgat
      421 gtttgcccta atccgtctgc cggccccgcc agaccaggta caccgggatc ccggtggcca
      481 cgatgaggag cccgggccag gtgtagagcg gtttctcgaa cagcaggatc agcatcaggg
      541 cgccgaccgc cagcaggtac agccccggca gcaccgggta gccgaaggcc ttgaccggtc
      601 gcggcaggtc gggccggagc cgccggaggc ggaagagcgc gagggtggtg aggaagtaga
      661 agaccagggc ggcgaagatg acgtagtcga gcagctggcc gtaggtcccg ctgatgcaga
      721 gcaccgaggc ccaggccgcc tgggcccaga ggccgaacac cggggtgtgg tgctcgcgat
      781 ggaggacgcc ggcccgctgg aagaacaggc ggtcccgcgc catcgcccag tagacccgcg
      841 gaccggcgag gatgagcccg ttgttgcacc cgaaggtcga gagcaggatc gcgaccgcca
      901 tcactgccgc ggcggcgccg ccgagcgcga cctcgatggc ggcggtgccc acccgatcct
      961 gcgatgcgtg ctggatgccc cgggcgagcg cgtcggcgcc gttggcatca ccgtagaacg
     1021 gcagcacgtt gaggtaggcc acgttggtca gcacgtagag caggctcacc agcccggtgc
     1081 ccaccgcgag cgcgatcggg aggttgcggc tcgggttctg cacctccgcc gccgcgaagg
     1141 tcacgttgtt ccaggcgtcg ctggagaaca gcgacccgac catggccgcg cccaccagcg
     1201 ggatcatcgc cagggtccag tcgcccgtcc cccagaagtc ggcgaagttc ccggccgcca
     1261 ctgccggctg ccggaagagg gtgaggccgc agatcaccag caccgcgagc gcgccggtct
     1321 tggccacggt gaacacggtc tggatgctgg caccgagccg gacgccgcga ccgttgatcc
     1381 aggtgaggag caggattgag aggatggcga ccacccgctg cggggagagg ccgagctgga
     1441 tcgcttcggc cgccccgggg agccggagct gccccagggg caggaagacg tcgggcgaca
     1501 ccgccggtac cagcacgctc aggaaccggg cgaacgccac ggccaccgcg gcgatggttc
     1561 cggtctgaat gaccgcgaag agggtccagc cgtagaggaa gccggccgaa ggcgagagcc
     1621 cctcgcgcag gaacacgtac tgcccgccgg ccttcggcat catggccgcc agctcggcgt
     1681 aggagagcgc cccgaccacg gtcaccagac cggtgacgac ccagaccagc agcagtcctc
     1741 ccggacccca gggcgagacc tgccggccga tgtccgccga cacgatgaag atgcccgagc
     1801 cgatcatgga gccgaccacg agggaaatgg cggccagggg cccgataccg cggacgaact
     1861 cggtgggcgg ggaggtcgcg ggcgcgctct gcgcgggggc cgccatatcg cctcgatgtt
     1921 gggacggtga gagggggtca ggccaccctg agcgcagcga agggggccat gctcgtatgg
     1981 tccccttcgc tgcgctcagg gtgacagtcg cttggtactg gtgtcggggt ccgtctcggg
     2041 aacggccggc tgcttgacgt cctcggcggc cttgaccgcc tcatccacca ctgcctgccc
     2101 cgccgcggcg aggcccttca tcaccttggc ggcgccgtcc accaggccca tcgtcccgct
     2161 gatcgcctgg atcggcagct tcccggcgcg catcgtgtcc tcgaccgtct cggtgatccg
     2221 cgcgaagagc ccgcccggtc gcgcccgctc cgcgtacttg ctctcgagga actcgatgta
     2281 gtcgaggatc tggtacccgc gctcgtcgct cagggcgtcg agcgcgcgcg cgatccgttg
     2341 cttgaggaga tcgttcatcg cctcactctc ctgcccgggc gaggccgggg gtggagaccc
     2401 gctccgccac gggcgtggcg agatagcggg ttcgcgcggc cttcagcgtc acgcgcaacg
     2461 tcagctcgtg gagtggcggc agtgcccgga actcggcgac gcgccccgga gggagcatga
     2521 cgtagacgaa tccgggctcg gggagcggcc cgcgggtcag gagatacggc tggccggagg
     2581 gcatctcggg gcggagctcg tccgcgatct gcaccgcgat gacctggagg cgccagtcca
     2641 gcgtctggcc cacgaaccga tcgggcgacg cccgcacctc ggccgcgctg atgccgccga
     2701 gcacgccgga ctccgccggc ttcacgtcgg cgtcgcggac ccagccctcg acctggaccc
     2761 gcacccactc gccggagcgg cccaccaccc ggcccgccgt gcccggcggc aaggtggcga
     2821 tcgccgagct gtcgggggcc cggctcaggc cggtctcccg gagcgtcact acaccctcga
     2881 tgccggccgc gggcgccggc gctgggggag gagcggcggg ggcggccgcc tggccgggct
     2941 gctgggagcg cgccggccgg cgcctcgtgg tgtcagcggc gcgctgggat gcggcctgcc
     3001 ggccgggcac ggcctcgcgc ggcacccatc catcccgccg cacccggaac cacttgcccc
     3061 gctcccccac ccgctccagc agggtcccct ctcgggcacg acccacgatg gggccgttgg
     3121 gtgccccccg aaggttctcg ccctcttcgg a
//
LOCUS       DASUYN010000364         2368 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1659774, whole genome shotgun sequence.
ACCESSION   DASUYN010000364 DASUYN010000000
VERSION     DASUYN010000364.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2368)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2368)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2368
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1659774"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..258)
                     /locus_tag="VF061_07120"
     CDS             complement(<1..258)
                     /locus_tag="VF061_07120"
                     /inference="COORDINATES: protein motif:HMM:NF012538.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HEX6669312.1"
                     /translation="MAILIRRYASYPAGSTAPRPCPGHPGSARRSAGRRSSQLQGSNS
                     LATEIGIRELLEAGVHFGHQTRRWNPKMRRFIFGERGGIHII"
     gene            complement(334..1353)
                     /locus_tag="VF061_07125"
     CDS             complement(334..1353)
                     /locus_tag="VF061_07125"
                     /inference="COORDINATES: protein motif:HMM:TIGR00005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEX6669313.1"
                     /translation="MAGLQPGGRLHRDRRGDAALGGGGEAETSPDELIAGAEDAGLRL
                     DAFLAARGAAPSRAAAQRLIERGAVTVDGRQRAKNHRIGEGERVAVEAPAAEAEPTPP
                     EPVSFEIVHEDEHLLVVDKPAGVVTHPAPGHRGPTLVEALAPLAAGGAHPERAGIVHR
                     LDRDTSGLLVVARSDEAHAALQRMMKAREVTREYTALVEGHPEAESGTIDAPIGRDRG
                     NRTVMSTRTDRARSAVTHFEVLERLPRTALLRVRLETGRTHQIRAHLAAIEHPVVGDP
                     QYGGRESGRRLALERQFLHASKLMFRHPISGELLACESKPPAELSHALDSARREPVSG
                     GPDGD"
     gene            complement(1254..1715)
                     /gene="lspA"
                     /locus_tag="VF061_07130"
     CDS             complement(1254..1715)
                     /gene="lspA"
                     /locus_tag="VF061_07130"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: protein motif:HMM:NF013421.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HEX6669314.1"
                     /translation="MSRGGAAAAIATAGVVVALDQATKQLAVANIERGEHVHVFFGLD
                     LTNTRNTGVAFGAFEGGGLVVAILIGLALALLVGYFVLHREMPLLWLPVGLLLGGALG
                     NLADRARDGAVIDFIDPVAWPAFNLADACIVIGVVMLLWVVEGRPKRVRTS"
     gene            complement(1712..2020)
                     /locus_tag="VF061_07135"
     CDS             complement(1712..2020)
                     /locus_tag="VF061_07135"
                     /inference="COORDINATES: protein motif:HMM:NF014389.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HEX6669315.1"
                     /translation="MTTWLAITRTDVADYLNTLVLVYLVLIFIRILTSWIPRMPYNRY
                     LAAFLKFVSDVTDPYLNLFRRILPPVRMGPGALDLSPIVATFVLIIVSSIVVGLIRPG
                     "
     gene            complement(2017..>2368)
                     /locus_tag="VF061_07140"
     CDS             complement(2017..>2368)
                     /locus_tag="VF061_07140"
                     /inference="COORDINATES: protein motif:HMM:NF026098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase dimerization
                     domain-containing protein"
                     /protein_id="HEX6669316.1"
                     /translation="LMGRAGAVIRLDDEPLIEPAMALMSCGPAFMSLVAESFADAGVA
                     HGLDPDDAIRMVVETMGGTAEYLARHDHDGPALRARVATPGGTTEKGLISLEENGLRD
                     VCRAAVDAVVEATR"
BASE COUNT          346 a          847 c          826 g          349 t
ORIGIN      
        1 gatgatgtgg atcccgccgc gctcgccgaa tatgaagcgg cgcatcttgg ggttccagcg
       61 gcgcgtctgg tggccgaaat ggacgccggc ctccagcagc tccctgatgc caatctcggt
      121 ggccaaagag ttgctccctt gaagttgtga tgaacgtctg cccgccgacc ggcgcgcgga
      181 cccgggatgt cccgggcagg gccgcggcgc tgtgcttccg gcggggtagc ttgcgtaacg
      241 gcgtatgagg atagccatcc ggcccggaaa cggcaggcgc ccctagcccg agaacgacac
      301 gaggcggtcc ggagaccgcc tcgctcgtat gtctcagtcc ccgtctggcc ctccggagac
      361 tggctcccgc cgggcgctgt caagtgcatg actcagctcg gcgggtggtt tggactcgca
      421 agcgagcaat tccccgctga tcggatgcct aaacatcagc ttcgaagcgt ggaggaactg
      481 gcgttccagg gcgagcctcc ggccgctctc ccggccgccg tattgagggt ctccgacgac
      541 cggatgctcg atcgccgcca ggtgtgcgcg gatctggtgc gtgcgcccgg tctccagccg
      601 aacgcgcagg agcgcggtgc gtggaaggcg ctccaggacc tcgaaatggg tcaccgcgct
      661 gcgagctcgg tccgtgcggg tggacatgac ggtccggttg ccgcgatcgc gccctatcgg
      721 ggcgtcgatg gtgccgctct cggcttccgg atggccctcc accagcgcgg tgtactcgcg
      781 ggtgacctcg cgcgccttca tcatgcgctg gagcgccgcg tgggcctcgt ccgagcgcgc
      841 caccacgagc agaccggagg tatcgcggtc caggcggtgc acgatgccgg ctcgctccgg
      901 atgcgcgccg cccgccgcga gcggcgccag cgcctccacg agcgtcggcc cgcggtgccc
      961 cggggccggg tgcgtgacca cccccgcggg cttgtccacc accagcaggt gctcgtcctc
     1021 gtgcacgatc tcgaaggaga ccggctccgg cggggtcggc tcggcctctg cggcgggcgc
     1081 ctcgaccgca acccgctccc cctcgccgat cctgtggttc ttggcgcgct gccggccgtc
     1141 caccgtgacc gcgccacgct cgatcaggcg ctgcgccgca gcgcgggagg gcgcggctcc
     1201 cctggccgcg aggaaggcgt ccaggcgcag gccggcgtcc tcggcgcccg cgatcagctc
     1261 gtccggactc gtttcggcct cccctccacc acccagagca gcatcaccac gccgatcacg
     1321 atgcaggcgt ccgccaggtt gaaggccggc caggccacgg ggtcaatgaa gtcgatcacg
     1381 gcgccgtcgc gagcgcggtc ggcgagattg ccgagcgcgc cgccgagcag cagccccacg
     1441 ggcagccaca gcagcggcat ctcgcggtgg agcacgaagt agcccaccag cagcgcgagc
     1501 gccagcccga tcaggatcgc gaccacgagc cctccgccct cgaatgcgcc gaacgccacc
     1561 cccgtgttgc gggtgttcgt gaggtccagc ccgaagaaga cgtgcacatg ctcgccgcgt
     1621 tctatgttgg cgacggcgag ctgcttcgtg gcctggtcga gcgcgacgac gacgccggcg
     1681 gtggcgatcg ccgcggccgc gcctccccgg ctcacccggg tcggatcagg cccaccacga
     1741 tgctgctgac gatgatcagc acgaacgtgg cgacgatcgg gctcaggtcg agcgcgccgg
     1801 gacccatgcg aaccggcggc aggatgcggc ggaacaggtt caggtacggg tcggttacgt
     1861 cgctgacgaa cttcaggaaa gccgcgaggt agcggttgta gggcatccgc gggatccagc
     1921 tggtgaggat gcggatgaag atcagcacga ggtagacgag gacgagcgtg ttgaggtagt
     1981 ccgccacatc cgtgcgcgtg atcgccagcc atgtcgtcat cgcgtggcct ccacgacggc
     2041 gtccaccgcc gcgcggcaca cgtcccgcag gccgttctcc tccaagctga tcaggccctt
     2101 ctcggtggtc ccgcccggcg tggccacgcg cgcccgcagg gcggggccgt cgtggtcatg
     2161 cctcgcgagg tactcggccg tgccgcccat cgtctcgacc accatgcgga tggcgtcatc
     2221 cgggtccaga ccgtgcgcca cccctgcgtc ggcgaagctc tccgccacga gcgacatgaa
     2281 ggcggggccg cagctcatca gcgccatcgc gggctcgatc agcggctcgt cgtccagccg
     2341 gatcacggcc ccggcgcgcc ccatcagg
//
LOCUS       DASUYN010000365         2268 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1440064, whole genome shotgun sequence.
ACCESSION   DASUYN010000365 DASUYN010000000
VERSION     DASUYN010000365.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2268)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2268)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2268
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1440064"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1097)
                     /locus_tag="VF061_07145"
     CDS             complement(<1..1097)
                     /locus_tag="VF061_07145"
                     /inference="COORDINATES: protein motif:HMM:TIGR03592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YidC/Oxa1 family membrane protein insertase"
                     /protein_id="HEX6669317.1"
                     /translation="MNPLELLEDPLRALLDFLHDPVNLTYGWCIVVLTVIVRTAMLPL
                     VIKQYSSMRSMQMVAPQLKELQRKYKGNRQKLNEELMAFYKENEINPFASCLPLVAQL
                     PIFIALYYVLKDFAEDASVSGGSVSFMWLIDDVRVDLQEIGWGAIVLVAIYGLSQLLS
                     TELSATPNMPDSQRRIMRILPVVVVIFVFQFPVPAGLLVYWMTTNLWTCGQQLVMRHR
                     IGLHLADPDEVAKFEANQQKRGSRTPPKEALAAVEADEPEAPAADERRTPRTRRRRGR
                     QAPEEAAAPEVAEAPEALEAPEAPEAPEALEAPQAEQAEPEAAESQPAEAEPAARGGG
                     ASGNGRGRSGGGAGTPRRQPRPKGAAKGSRPA"
     gene            complement(1094..1327)
                     /gene="yidD"
                     /locus_tag="VF061_07150"
     CDS             complement(1094..1327)
                     /gene="yidD"
                     /locus_tag="VF061_07150"
                     /inference="COORDINATES: protein motif:HMM:NF013932.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HEX6669318.1"
                     /translation="MRYLGIGLVQLWRWTFGLLTPAGTCKYHPSCSQYAIDAFREFGL
                     VRGGVLAGWRLLRCNPWSHGGVDYAHDQTVFRT"
     gene            complement(1324..1674)
                     /gene="rnpA"
                     /locus_tag="VF061_07155"
     CDS             complement(1324..1674)
                     /gene="rnpA"
                     /locus_tag="VF061_07155"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: protein motif:HMM:NF013022.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004526 - ribonuclease P activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HEX6669319.1"
                     /translation="MQRRNRLSRSKDFDTVYRRGRSASSRYLVLHWFPRDGDPDGEPR
                     LGLAVPRSVGSAVARNRVKRLLRESWRELLPTVPAGQDYVLAARPGLAEPADARGKDW
                     LVTEIADVLEKARA"
     gene            complement(1685..1819)
                     /gene="rpmH"
                     /locus_tag="VF061_07160"
     CDS             complement(1685..1819)
                     /gene="rpmH"
                     /locus_tag="VF061_07160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003397591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HEX6669320.1"
                     /translation="MKRTYQPNVRRRKRRHGFRARMSTRGGRAILKRRRARGRKRLSA
                     "
BASE COUNT          344 a          800 c          790 g          334 t
ORIGIN      
        1 gccggccgcg aacccttggc ggcgcccttg gggcgcggct gccggcgcgg ggtgcccgcc
       61 ccaccgccgg agcggccacg gccgttcccc gacgcgccac cgccacgcgc cgccggctcc
      121 gcctcggcgg gctgggactc cgcggcctcc ggctcggcct gctcggcctg tggcgcctcc
      181 agggcctccg gcgcctcggg cgcctcgggc gcctccagag cctcgggcgc ctccgcaacc
      241 tcgggcgcgg ctgcctcctc cggcgcctgc cggccgcggc ggcggcgggt gcgcggcgtg
      301 cggcgctcgt cggcggccgg ggcctccggc tcgtcggcct cgaccgccgc gagggcctcc
      361 ttgggcgggg tgcgcgaccc acgcttctgc tggttggcct cgaacttcgc gacctcgtcc
      421 gggtcggcca ggtggaggcc gatccggtgc cgcatcacga gctgctggcc gcaggtccag
      481 aggttggtag tcatccagta gacgagcagg ccggcgggca ccgggaactg gaacacgaag
      541 atgaccacga ccaccggcag gatccgcatg atccgccgct gcgagtcggg catgttcggc
      601 gtggcggaga gctcggtcga gaggagctgc gacagcccgt agatggccac caggacgatc
      661 gcgccccagc cgatctcctg gagatccacg cgcacgtcgt cgatcagcca catgaaggac
      721 accgatccgc ccgacaccga ggcgtcctcc gcgaagtcct tcagcacgta gtagagcgcg
      781 atgaagatcg ggagctgcgc gaccaggggc aggcacgagg cgaacggatt gatctcgttc
      841 tccttgtaga acgccatcag ctcctcgttg agcttctggc ggttgccctt gtacttgcgc
      901 tgcagctcct tgagctgcgg ggcgaccatc tgcatcgacc gcatcgacga gtactgcttg
      961 atcaccagcg gcagcatcgc cgtccggacg atcaccgtca ggacgacgat gcaccagccg
     1021 taggtgaggt tgaccgggtc gtggagaaag tcgaggagcg cacggagggg atcctcgagg
     1081 agctcgagcg ggttcacgtg cggaacaccg tctggtcatg ggcgtagtcg acgccgccgt
     1141 ggctccacgg gttgcagcgc aggaggcgcc acccggcgag gaccccaccg cgcacgagcc
     1201 cgaactcacg aaaggcgtcg atcgcgtact gcgagcagct cgggtggtac ttgcacgtcc
     1261 ccgcgggcgt gaggagcccg aacgtccagc gccagagctg gaccagcccg atgcccagat
     1321 acctcatgcg cgcgccttct cgagaacgtc tgcgatctcc gtgacgagcc agtccttccc
     1381 gcgcgcgtcc gcgggctcag cgagaccggg ccgcgcggcg agcacgtagt cctggcctgc
     1441 ggggaccgtc ggaaggagtt cgcgccacga ctcgcggaga agtcgcttca cccggttgcg
     1501 ggcaacggcc gagcctacgg accggggcac ggcgagcccg agccggggct cgccatccgg
     1561 atcgccgtcc cgcggaaacc agtgcaggac gaggtagcgc gacgacgccg agcggccgcg
     1621 gcggtagacg gtgtcgaagt ccttcgaccg ggagagccga ttgcggcgct gcaccgggcg
     1681 cgtctcaggc ggagagccgc ttgcgcccac gtgcccgccg ccgcttgagg atcgcgcggc
     1741 cgccgcgggt ggacatccgc gctcggaacc cgtgacgccg cttccggcgg cgaacgttcg
     1801 gttgataggt gcgtttcacg tcgtgtctct ccgctgaggc tgcggggagc ggcgagtata
     1861 gacggaccgc ctcgccgtta cgttttccac agtcgccatt caccaggcgg tatcggaaag
     1921 cgctgctcct gggagatcga cgttttctct tcgagcaacg caagctgctt cttccacacc
     1981 tgtggacagg cgtgtggaag aacggaattc cctgcaaaac gcgctgtttt tcatccacag
     2041 gcggctcgcg gagcccgttg agccctcgcc gacatggtgc tatgctcgcc ccttcccgac
     2101 gaccccgatc gaccgcgagg acgggtggag caccccgccg agacacgacc cgacgacctc
     2161 tggaacgcca tcgctggccg gctgagggac tccctcaccg atacgacgta tgacacgtgg
     2221 ttcggccagg cacggccgca cgcggtcacc cccgaccggc tcgtcgtc
//
LOCUS       DASUYN010000366         2794 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1440075, whole genome shotgun sequence.
ACCESSION   DASUYN010000366 DASUYN010000000
VERSION     DASUYN010000366.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2794)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2794)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2794
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1440075"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(131..1378)
                     /locus_tag="VF061_07165"
     CDS             complement(131..1378)
                     /locus_tag="VF061_07165"
                     /EC_number="2.7.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008776 - acetate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006085 - acetyl-CoA biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HEX6669321.1"
                     /translation="MHVLVLNVGSSTLKFQLIRTDAERIASGTDERLARGQIERIGGE
                     AVLTLEAGAERAPRRTVAALRNHGAAVDHVLRWLTDARTGAGIDTLGQIEAVGHRVVH
                     GGEHFTRSVLIDADVLHRLDEIIDLAPLHNPHNLSGIRAAQAALGPGVPQVAAFDTAF
                     HHTLPEAAYVYALPYQYYRRYKVRRYGFHGTSHRSVAHRYRQLTGRSREQTNLVTLHL
                     GNGCSACAIKGGESVDTSMGFTPLEGLVMGTRSGDLDPAILDFLAAKEGLSLSQVEAV
                     LNKSSGLLGVSGLTADMRELLAEAVEHDDRRARLAITLFCYRVRKYVGAYLAAMDGAD
                     AVVFAGGIGENAAQVRAEVCAGLGWLGAELDPEANAAMVGGREGRIDTGGGRLELWVV
                     PTDEELLIARDAYRVVTGVESPY"
     gene            complement(1409..1948)
                     /locus_tag="VF061_07170"
     CDS             complement(1409..1948)
                     /locus_tag="VF061_07170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX6669322.1"
                     /translation="MRTQLMLLPTLGLLLSCGGGADRIDDRETGAAGQPGADTTAPAA
                     TAMTDTAAGGGLEWGPAPPGLPPGARTAVLSGDPSKAGPFTVRVEMPTDYTIRPHHHP
                     TSEELRLLEGTLHLGHGTKWDEKGMKAMATDQPVKLEAKEPHYLHAAGRVVLEVQSTG
                     PFAITYVDPKDDPRAGSTP"
     gene            2234..2389
                     /locus_tag="VF061_07175"
     CDS             2234..2389
                     /locus_tag="VF061_07175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669323.1"
                     /translation="MTRAKKSFRLELTKEQQALVLQKVGMEAKELELTVDELEQKTDP
                     KQVGNQP"
BASE COUNT          415 a          922 c         1021 g          436 t
ORIGIN      
        1 tatccggagt ccgccatgcc ccaggaagtg aagctcctcg atcggcccgg ggaggaccaa
       61 ttcgacatcc ccctcgtggt cgggtggttg gtggccgcct gcacctgggt cgcgtccgcc
      121 ggccggaggc tcagtagggg gactcgactc cggtcacgac ccggtacgca tcccgtgcga
      181 tgagcagctc ctcgtcggtc ggcacgaccc agagctcgag gcgcccaccg ccggtgtcga
      241 tgcgaccctc acgaccgccc accatggcgg cgttggcctc cgggtccagc tcggcgccga
      301 gccatccgag gccggcgcac acttcggccc gcacctgggc ggcgttctcg ccgatcccgc
      361 cggcgaacac gacggcatcg gcgccatcca tggcggcgag gtacgccccc acgtatttcc
      421 gcacccgata acagaagagg gtgatggcga gccgggcccg gcggtcgtcg tgctcgacgg
      481 cctcggccag gagctcgcgc atgtcggccg tcaggccgga cacgccgagc aggccggagg
      541 acttgttgag gacggcttcg acctgcgaca gcgacagccc ttccttggcg gcgaggaagt
      601 cgaggatcgc cgggtccaga tcaccggagc gggtgcccat aacgagcccc tcgagcgggg
      661 tgaatcccat cgaggtgtcc accgactcgc cccccttgat ggcacaggcg gagcacccgt
      721 tccccaggtg cagcgtcacc aggttggtct gctcccggct ccgtccggtg agctggcggt
      781 agcggtgcgc cacggagcgg tgggaggtgc cgtggaatcc gtaccggcgc accttgtagc
      841 ggcggtagta ctggtagggt agcgcgtaga cgtaggcggc ctcgggcagg gtgtggtgga
      901 aggcggtgtc gaaggccgcc acctggggga caccggggcc gagcgccgcc tgggcggcgc
      961 ggatgccgct caggttgtgc gggttgtgga gcggggcgag gtcgatgatc tcatcgagac
     1021 ggtgcagcac gtccgcgtcg atgaggaccg agcgggtgaa gtgctccccg ccgtggacca
     1081 cccggtgccc cacggcctcg atctgtccca gggtgtcgat gccggccccg gtccgggcgt
     1141 cggtgagcca gcggagcacg tggtccaccg cggcgccgtg gttccgcagc gcggcgaccg
     1201 tgcgccgagg ggctcgctcg gcgccggcct ccagggtgag gaccgcctcg ccgccgatgc
     1261 gctcgatctg gccccgggcg aggcgttcgt ccgtgccgga cgcgatccgc tcggcgtcgg
     1321 tccggatgag ctggaacttg agggtcgagc tgccgacgtt gaggaccagc acgtgcacgg
     1381 acgcgccctc tcttgattgt ccggcggctc agggcgtcga gccggcccgt gggtcgtcct
     1441 tcggatcgac gtaagtgatc gcgaaggggc cggtgctctg cacctccagg acgacgcggc
     1501 cggcggcatg gaggtagtgg ggctccttgg cctccagctt cacgggctgg tcggtcgcca
     1561 tcgccttcat gcccttctca tcccacttgg tgccatgccc caggtgcagc gtaccctcga
     1621 gcaggcggag ctcctcgctc gtggggtgat ggtgtgggcg aatcgtgtag tccgtcggca
     1681 tctccacccg gacggtgaac gggccggcct tggacgggtc gcccgagagg accgcggtcc
     1741 gggcccccgg cggaaggccg ggaggcgccg gaccccattc gaggccgccg ccggcggcgg
     1801 tgtcggtcat cgcggtggcg gcaggagccg tcgtatcggc gccgggctgg cccgccgcgc
     1861 cggtctcgcg atcgtcgata cggtccgctc cgcccccaca acttagaagc agcccgaggg
     1921 tgggtaacag catgagctgg gtgcgcatgg tgcgtccctc cgaagatgcc gcacggcccc
     1981 gggcgcgcgg gccaatcccg cagggcgacg gggccgggcg gcggatccac gatagggcgc
     2041 agggcggcgg tcggccaggg gtggccaccg tgcccgggct cgccgccggc tatgtggcgt
     2101 cggacaccgc gccagctggg cccaagacgg tagggtaaag tgcgaccagt ctttgcgcct
     2161 cagccggatt cggagcgatg gtcgctgggg gaccggcggg cgtgcggcgc agcaacacca
     2221 tggaggaggg cttatgacga gagccaagaa gtcgtttcgc ctcgagctga cgaaggagca
     2281 acaggcgctc gtcttgcaga aggtcggaat ggaagccaaa gagttagagc tgacggtcga
     2341 cgaattggag cagaagacag accccaaaca ggtggggaac cagccgtgag atccttcggg
     2401 gtctcgaagc atcgctggac cttacgcgtg tagcggcctc gcaaagaggc tgaaagtgcg
     2461 cagggtagcc ggggcaacgc cgtgagcgtc gccgtcgggc gacccaatcg taggctcggt
     2521 cgcgcatgcc aaccgggagc agcccgccga tgaggccgag gctccacggc atgccaagca
     2581 cccggtgttg cgccatgatc ctcctggccg tacggcattg ggccggtttc tcgcctaccg
     2641 tcgcttcttc cttactcgat cgatcaactt tacgaactcg tccggatccg gcagcgtcac
     2701 tttccgagct ttcgccgccc gtcgaatccg agacttgatc gttcgcacct ccgcgacggt
     2761 gtacttctcc gcgttccgcg gcttgtggat gtag
//
LOCUS       DASUYN010000367         3584 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1660439, whole genome shotgun sequence.
ACCESSION   DASUYN010000367 DASUYN010000000
VERSION     DASUYN010000367.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3584)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3584
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1660439"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(45..1673)
                     /gene="pruA"
                     /locus_tag="VF061_07180"
     CDS             complement(45..1673)
                     /gene="pruA"
                     /locus_tag="VF061_07180"
                     /EC_number="1.2.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003842 - 1-pyrroline-5-carboxylate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0006562 - proline catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-glutamate gamma-semialdehyde dehydrogenase"
                     /protein_id="HEX6669324.1"
                     /translation="MSGISNIPHPRNEPVLGYGPGTPERVALKAALGAVGAQAIEIPA
                     VVGGREVRTGDTHDVVSPHCHQRVLARVHQADGATIGAAVKAAVEAQRDWGHWRFEDR
                     AAVFLKAAELLATVHRQLLNAATMLGQSKTAFQAEIDSACELIDFLRFNVHYAERIYR
                     EQPESAAGTWNRLDHRPLEGFVYAITPFNFTAIGGNLPTAPALMGNAVVWKPAGSATL
                     SNWHFYKLLEEAGLPPGVINFLPGDAIAVSRTLLADRHLAGIHFTGSTAVFQSLWRTV
                     GETLERYAGYPRIVGETGGKDFIVAHASADVEALAVAMVRGAYEYQGQKCSAASRAYV
                     PDTLWPEVRDRVVGMIGDVRMGDVADFRNFMGAVIDRKAFDRIRGYLDQAKQAPGVKI
                     VAGGGSDDSVGWFVEPTLLQAEDPAYRTMCEEIFGPVLTVHVYPAAKWSETLALVDRT
                     GPYALTGAIFAQDRAAVVEADRALRYAAGNYYVNDKPTGAVVGQQPFGGGRASGTNDK
                     AGSVLNLLRWVSPRAIKETFAPAKDYRYPFMSEA"
     gene            1778..2167
                     /locus_tag="VF061_07185"
     CDS             1778..2167
                     /locus_tag="VF061_07185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669325.1"
                     /translation="MSRGSAALCLLLVLSACRGYDYYSPLADSGGLVPGDQMARYGRE
                     QAQAVAIARTFAAARTGDSPEAWGAQADSAMRYARTLPDVVNAVADPLSHRLTVRFRS
                     GWIEGIVPLADGTPAAETPGLPSARAP"
     gene            2182..2502
                     /gene="cutA"
                     /locus_tag="VF061_07190"
     CDS             2182..2502
                     /gene="cutA"
                     /locus_tag="VF061_07190"
                     /inference="COORDINATES: protein motif:HMM:NF015077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010038 - response to metal ion [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="divalent-cation tolerance protein CutA"
                     /protein_id="HEX6669326.1"
                     /translation="MTTTLPDREAANRIGRRLVEERLAACAQVVGPVSSVYWWQGEVE
                     SAGEWYCHLKTNASRVDALMARIRELHPYETPEIVALPVTEADAAYLRWIAESVADPS
                     VRTG"
     gene            2531..2803
                     /locus_tag="VF061_07195"
     CDS             2531..2803
                     /locus_tag="VF061_07195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669327.1"
                     /translation="MTSRTRLTTALVIVAFIAFLLYSTLEVQRVECTVTVEFQGQRRT
                     ATASGANEESATEQAQTTACGPLVQGMDESIACGRRQPVAVQCRPL"
     gene            2811..>3584
                     /locus_tag="VF061_07200"
     CDS             2811..>3584
                     /locus_tag="VF061_07200"
                     /inference="COORDINATES: protein motif:HMM:NF015563.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669328.1"
                     /translation="MTASRFPHPLTLLVACVLLAGALTWLVPAGEYERREDAATGRSV
                     VVPGTYAPVEAAPIGPFQALVGIPRGMAAAAPVIFFVFLVGGAFAVVERTGALGRLVN
                     SLVAALEGRGLLVIPVAGLAFATGGALIQMQEELIAFVPVLLLLTSRLGFNPVVAVAM
                     SLGASAVGASFSPINPFQVGIAQKVAKLDLLSGWEFRLAFLVAALALWIVGTMLYARR
                     TRVPVAAAPTETGAAAGDGAGARHTAVLLAVVLAFVAFVV"
BASE COUNT          468 a         1372 c         1192 g          552 t
ORIGIN      
        1 gctggtcacc tacgacgcgg agcggcaggc cctggtgctg aaggctaggc ctccgacatg
       61 aacggatacc ggtagtcctt cgccggcgcg aacgtctcct tgatcgcccg gggcgacacc
      121 cagcgcagca ggttgagcac cgagcccgcc ttgtcgttgg ttccgctcgc gcgtccgccg
      181 ccgaacggct gctgacccac gaccgccccc gtcggcttgt cgttcacgta gtagttgccc
      241 gccgcgtagc gcagggcccg gtccgcttcc accaccgccg cgcggtcctg cgcgaagatt
      301 gcgccggtga gagcgtaggg gccggtccgg tccaccagtg cgagcgtctc cgaccacttc
      361 gcggccggat agacgtgcac cgtgagcacc ggaccgaaga tctcctcgca catcgtccgg
      421 taggccgggt cttccgcctg cagcagcgtc ggctccacga accagcccac ggagtcgtcg
      481 ctcccgccgc ccgcgacgat cttcactccc ggagcctgct tcgcctggtc gaggtagccc
      541 cggatccggt cgaacgcctt ccggtcgatc accgcgccca tgaagttgcg gaagtccgcg
      601 acgtcgccca tccggacgtc gccgatcatc ccgaccacgc gatcccgcac ctcgggccac
      661 agggtgtccg gcacgtaggc ccgggacgcc gcgctgcact tctggccctg gtactcgtac
      721 gccccccgca ccatcgcgac ggccagcgcc tcgacgtccg cgctggcgtg cgcgacgatg
      781 aagtccttgc cccccgtctc ccctacgatc cgcggatagc cggcgtagcg ctccagggtc
      841 tcaccgaccg tccgccacag gctctggaac accgccgtcg agccggtgaa gtggatacca
      901 gccaggtggc ggtccgccag cagggtgcgg ctcaccgcga tcgcgtcgcc ggggaggaag
      961 ttgatgacgc cgggaggcag gcccgcctct tccagcagct tgtagaagtg ccagttgctg
     1021 agcgtcgcgc tccccgccgg cttccacacg accgcgttgc ccatcagcgc cggcgccgtc
     1081 ggcaggttgc cgccgatcgc ggtgaagttg aagggcgtga tggcgtagac gaagccttcc
     1141 agcggccgat ggtccagccg gttccacgtc cccgccgccg actccggctg ctcccggtag
     1201 atccgctccg cgtagtgcac gttgaagcgc aggaagtcga tcagctcgca ggcgctgtcg
     1261 atctccgcct ggaacgccgt cttgctctgg cccagcatgg tggcggcgtt gagcagctgc
     1321 cggtgcaccg tggcgaggag ctccgccgcc ttgaggaaga ccgccgcccg gtcctcgaac
     1381 cgccagtggc cccagtcccg ctgcgcctcg accgccgcct tcaccgccgc cccgatcgtc
     1441 gccccgtcgg cctggtgtac ccgcgccagc acgcgctggt ggcagtgggg agagaccacg
     1501 tcgtgggtgt cgcccgtccg gacctcacgc ccgccgacca cggccgggat ctcgatcgcc
     1561 tgggcgccga ccgcgcccag tgccgccttc agcgccacgc gctccggcgt gcccggaccg
     1621 tagcccagca ccggctcgtt gcggggatgg ggaatgttgg agatgccgct catcgctcgc
     1681 cccggaatgg aaaaatcgta agctaacccg tcgccgtcgg agccgcccgg cattaccttc
     1741 gggcgtgacg gtcagacatc caccgcgagg cttcgccatg agccgtggct ccgccgccct
     1801 gtgcctgctg ctggtcctct ccgcctgccg cgggtacgac tactactccc ccctcgccga
     1861 ttccgggggc ctcgtccccg gcgaccagat ggcgcgatac ggccgggagc aggcccaggc
     1921 cgtcgccatc gcgcgcacct tcgccgccgc ccgcacgggt gactcccccg aggcctgggg
     1981 cgcgcaggcg gacagcgcca tgcgctacgc ccgcaccctg cccgacgtgg tcaacgccgt
     2041 ggccgatccc ctgagccacc ggctgaccgt gcggttccgg agcggatgga tcgaggggat
     2101 cgtcccgctg gccgacggca cgcccgcggc cgagacaccc ggccttccct cggcgcgcgc
     2161 cccgtgaccg agggccgcca ggtgacgacc accctgcccg accgggaggc ggccaaccgg
     2221 atcggcaggc gcctggtgga ggagcggctc gcagcgtgcg cccaggtggt gggcccggtc
     2281 tccagcgtgt actggtggca gggcgaggtc gagtcggccg gtgagtggta ctgtcatctc
     2341 aagaccaacg cctcccgggt ggatgccctc atggcccgca tccgcgagct gcacccgtac
     2401 gagacccccg agatcgtggc cctccccgtc accgaggccg atgccgccta tctgagatgg
     2461 atcgcggagt cggtcgccga tccgtcggtc cgaaccggat gaccctcacc cctacaccgc
     2521 tcagacaccc atgaccagtc gcacgcggct cacgaccgcc ctggtgatcg tcgcgttcat
     2581 cgctttcctg ctctactcca ccctggaggt ccagcgggtg gagtgcaccg tgaccgtgga
     2641 attccagggg cagcggcgca cggccaccgc ctcgggggcc aacgaggagt cggcgacgga
     2701 gcaggcacag accaccgcct gcggcccgct ggtccagggg atggacgaga gtatcgcctg
     2761 cggccggcgc cagcccgtcg cggtgcaatg ccggccgctc tgatcggccg gtgacggcgt
     2821 cccggttccc ccatccgctc acgctcctgg tcgcctgcgt cctcctggcg ggcgccctca
     2881 cctggctcgt cccggccggc gagtacgagc gccgggagga tgcggcgacc ggtcgcagcg
     2941 tcgtagttcc cggcacctac gcccccgtcg aggccgcgcc gatcggcccc ttccaggcac
     3001 tggtcgggat cccccgcggc atggccgccg ccgcacccgt catcttcttc gtcttcctgg
     3061 tcggcggggc cttcgcggta gtggagcgga ccggcgcgct gggcagactg gtcaactcgc
     3121 tcgtggccgc gctcgaggga cgcggactgc tggtgatccc ggtcgcggga ctggccttcg
     3181 ccaccggcgg cgcgctgatc cagatgcagg aggagctgat cgccttcgtc cccgtcctcc
     3241 tgctgctcac ctcgcggctc ggtttcaatc ccgtggtcgc cgtggcgatg agcctgggcg
     3301 cctcggccgt cggcgcctcg ttcagcccca tcaacccctt ccaggtcggc atcgcccaga
     3361 aggtggcgaa gctcgacctg ctctccggct gggaattccg cttggccttc ctcgtggccg
     3421 ccctcgcgct ctggatcgtg ggcaccatgc tctacgcgcg ccgcacgcgg gtgcccgtgg
     3481 ccgccgcacc cacggagacg ggggcggccg ccggcgacgg cgccggtgcc cgccacacgg
     3541 cggtcctgct ggccgtcgtc ctggccttcg tcgccttcgt ggtc
//
LOCUS       DASUYN010000368         2700 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1220622, whole genome shotgun sequence.
ACCESSION   DASUYN010000368 DASUYN010000000
VERSION     DASUYN010000368.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2700)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2700)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2700
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1220622"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1390
                     /locus_tag="VF061_07205"
     CDS             <1..1390
                     /locus_tag="VF061_07205"
                     /inference="COORDINATES: protein motif:HMM:NF015706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="EF-Tu/IF-2/RF-3 family GTPase"
                     /protein_id="HEX6669329.1"
                     /translation="ASTDDELIERYLAGEEIPRDQFIGAVKRAMMAGQVVPLFCGSST
                     LTYGLRTLLKKIVELLPSPAEVKPPVEAPLVGRVFKTHSEAHVGDVTLFRLYTGELRN
                     GEEVWNAEHEVAEKLNHLSIQQGKERIEVERLSAGDIGSVAKLRDTHTGDTFCHRDQP
                     LRLTPLPLPEAVATSAVLVKQRGEEDKLAAGLHKLHEEDPTFHFEYSSELGQTLIHGM
                     GERHFDTILNRLERKFGVHAELTRPKVAYRETLKGKGEGQGKHKKQTGGRGQYGDCWV
                     RLSPRPRGAGYAFVDNIVGGVIPNKDIPAVDKGVQEAAERGVVAGYPMVDFQAECYDG
                     SYHDVDSNEMSFKMAGILAFRNVASKCKPVLLEPLADLEVWTPDDVLGDVMGDLSARR
                     GQILGTEPDGRLTKVRAILPEAELYKYSTTLHSITHGRGTHRQRFHGYAEAPPEVAAK
                     VAAENQKEHAVA"
     gene            1783..2331
                     /locus_tag="VF061_07210"
     CDS             1783..2331
                     /locus_tag="VF061_07210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669330.1"
                     /translation="MSRWPRSMSAVLLTAVLVGGVGCTSSDALVPSEPAAPASMAAGD
                     PESPPLSGVFNSVSLLSCSPQSYVAVTKVVGPDGGTILVGTHKLVIPSGALSRNYTIR
                     AEQVRHPVNSVRFSPEGLRFAKPARLTMSYANCSPLLLLKRVVYTDEVLSILELIPSL
                     DNLQTGTVTGEIRHFSRYAVAW"
     gene            2377..>2700
                     /locus_tag="VF061_07215"
     CDS             2377..>2700
                     /locus_tag="VF061_07215"
                     /inference="COORDINATES: protein motif:HMM:NF022317.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2784 domain-containing protein"
                     /protein_id="HEX6669331.1"
                     /translation="MGYRILADVVVGIHALFVAFVMLGGLLALRRPWVAALHLPAAVW
                     GALIELRGWICPLTPLEKSLRAAAGEAGYQGGFIEHYLLPVLYPAGLTRNVQLVLGAA
                     VIVVNV"
BASE COUNT          444 a          876 c          954 g          426 t
ORIGIN      
        1 ggcgtccacc gacgacgagc tgatcgagcg ctacctcgcg ggcgaggaga tcccccgcga
       61 ccagttcatc ggtgcggtga agcgtgccat gatggccggg caggtcgtcc cgctcttctg
      121 cgggagctcc acgctcacgt acgggctccg gaccctgctc aagaagatcg tcgagctgct
      181 cccctccccc gcggaagtga agccgccggt ggaggcgccg ctggtgggcc gggtgttcaa
      241 gacccactcg gaagcgcacg tgggagacgt caccctgttc cggctctaca ccggcgagct
      301 gcggaacggg gaggaggtgt ggaacgcgga acacgaggtg gcggagaagc tgaaccacct
      361 ctcgatccag caggggaagg aacggatcga ggtggagcgg ctgagcgcgg gggacatcgg
      421 gtcggtggcc aagctgcgcg acacccacac cggggacacc ttctgccacc gggaccagcc
      481 gttgcggctg acgccgctgc cgctgcccga ggcggtcgcg acgtccgcgg tcctggtgaa
      541 gcagcggggc gaggaggaca agctcgcggc cgggctgcac aagctgcatg aggaggatcc
      601 caccttccac ttcgaataca gctcggagct ggggcagacc ctcatccacg gcatgggcga
      661 gcggcatttc gatacgatcc tcaaccgcct ggagcggaag ttcggggtgc atgccgagct
      721 cacccggccg aaggtcgcct accgcgagac gctgaagggc aagggcgagg gccaggggaa
      781 gcacaagaag cagaccggcg gccgggggca gtacggcgac tgctgggtcc ggctctcacc
      841 ccgtccgcgc ggcgcgggct acgccttcgt ggacaacatc gtgggcggtg tgatccccaa
      901 caaggacatc ccggcggtgg acaagggcgt ccaggaagcg gccgagcgcg gcgtcgtggc
      961 gggctacccc atggtggact tccaggcgga gtgctacgac gggtcgtatc acgacgtgga
     1021 cagcaacgag atgtcgttca agatggccgg catcctggcg ttcaggaacg tggcctccaa
     1081 gtgcaagccg gtgctgctcg agccgctggc ggacctggag gtgtggacgc cggacgacgt
     1141 cctcggtgac gtgatgggcg acctgagcgc gcggcggggc cagatcctcg gcacggagcc
     1201 cgacggccgg ctgaccaagg tgcgcgccat cctgccggag gcggagctgt acaagtactc
     1261 cactacgctg cactccatca cccacggccg gggcacgcat cggcagcggt tccacggcta
     1321 tgccgaggcg ccacccgaag tggcggcgaa ggtggcggcg gaaaatcaga aggagcacgc
     1381 tgtcgcctag gcagacaggg cgggagactc cgtcaccctg agcggggcga agggggccat
     1441 ctcgacatgg tccccttcgt ttcgttcagg gtgagagcgg ctgcccgcat gtcactggtt
     1501 gcatgctcgg gtcgccagtt gcagcggccc ctgcggcgga ttgcgagcac acgcgagcgc
     1561 ttcctcggct gccactccag acacccccgt ccaacaccaa aacaccagct cgttgctgcg
     1621 ttcacatgca atggcttaga ccctgggggg atactccgca ggacatcttt ggcacgccaa
     1681 taatcgcgac agtcgggtgt ctcggaggca tggggcttgc cccctatcgg gagcgacgcc
     1741 gcggcattgt cgcacggcga gaacttcaac cgggagtgcc gtatgtcccg atggccgcgc
     1801 agcatgtccg ccgtcctcct gaccgcggtg ctcgtcggtg gagtcggttg tacctcgagc
     1861 gacgccctcg tcccctcgga gcccgccgcg ccggcctcga tggctgccgg ggacccggag
     1921 tcacctcccc tgagcggcgt gttcaatagt gtcagcttgc tctcctgctc gccgcaatcg
     1981 tacgtcgccg tgaccaaggt ggtcggcccc gacgggggca ccatcctggt cggcacccac
     2041 aagctggtca ttccctcggg tgccctgagc cggaactaca cgatccgggc ggagcaggtg
     2101 cgccacccag tgaactcggt gcggttcagc cccgagggcc tcaggttcgc gaagccggcg
     2161 aggctcacca tgagctacgc caactgttcg ccgctgctgc tgctcaagag ggtggtgtac
     2221 accgacgagg tgctcagtat cctggagctg ataccgtcgc tcgacaacct gcagaccgga
     2281 acggttaccg gcgagatccg gcacttctcc cggtacgcgg tggcctggta gcggcctcgc
     2341 gccgcctgaa cctcgctccg tccttacaat tcggtgatgg gctaccgcat cctggccgac
     2401 gtcgtggtcg gaatccatgc gctcttcgtc gcgttcgtga tgctgggcgg gctgctggcg
     2461 ttgcgccggc cgtgggtggc ggccctgcat ctgcccgcgg cggtctgggg cgcgctgatc
     2521 gagctccggg gatggatctg cccgctgaca ccgctggaga agtcgcttcg cgcggccgcg
     2581 ggggaggcag ggtaccaggg gggattcatc gagcactacc tgctgccggt gctctacccg
     2641 gcgggtctca cccggaacgt gcagctggtg ctgggtgcgg cggtaatcgt ggtgaacgtc
//
LOCUS       DASUYN010000369         3627 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1440398, whole genome shotgun sequence.
ACCESSION   DASUYN010000369 DASUYN010000000
VERSION     DASUYN010000369.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3627)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3627)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3627
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1440398"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1663)
                     /locus_tag="VF061_07220"
     CDS             complement(<1..1663)
                     /locus_tag="VF061_07220"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX6669332.1"
                     /translation="MDLAVYLRPDRLALLEESGRALLETSEPETVAKVALGTVVPALA
                     EMAVLVMFDHTGSRHITAAHARQDAGPGLEREVRSALDAIVATAAASARQGRYARWIP
                     SVTPASMRLLTRGDRRLVSLIRTVELRSLIVVALRTGGRTFGALALGRSEAAEPFRSG
                     DFATAQVLARRVALAVQRAMMDESGAVERWRAVFDAAWWGAAVVDAADHRVEAVNRAF
                     ARLVGEDPSSLLGRPIAELLPQDETEEPEPWGVGQEARVYESEVRRPDGVAAPVLVNV
                     TPVDETDAGSLVVTVQDLSDLKRAEERLRRAQRMEAVGRLAGGVAHEVNNMMTIILGF
                     SDLLSRRSDGGGDPREVEEIRKAAMRAARITSQLLAFSRQQVLQPADQRLNAVVEQMA
                     PVLRLMLPANVRVETSLAPFDSVVRADRSQLEQVLINLAFNARDAMTAGGTIRIATGS
                     RRLDEETGRRLIGIPIPEGSYGLISVVDTGHGMDRTTLAHVFEPFFTTKPVGSGTGLG
                     LSTVYGIVKQSGGYVWADSSPGRGTAFTICLPEVSGGTREQPATVA"
     gene            2340..2840
                     /locus_tag="VF061_07225"
     CDS             2340..2840
                     /locus_tag="VF061_07225"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX6669333.1"
                     /translation="MTADLARLFDEYYPSLVRMLYRRTGDRDRAEDLAQETFARAVAA
                     PPDNPRPWLFAVALNLVREDGRRSVTRGRRLELLRSEQDRPAAGPDVDFERGEEVARV
                     RAALARLNERDREALLLKAEGFGYDEIASTLGLAKGAVGTTLARARRRLVEAYRAQDR
                     GNNVAS"
     gene            2827..>3627
                     /locus_tag="VF061_07230"
     CDS             2827..>3627
                     /locus_tag="VF061_07230"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HEX6669334.1"
                     /translation="MSHLDEGTLHALLDGELDLHEVKEIQAHIGSCAACGTRLREVKE
                     FHGESDRIVGLLELPSTPSRRTATADPIPDAFGESPVDRRRKPRDPGRVSGPANEPPP
                     LLLPENPGYQRGGLIRRMRWAALLLVTVGAGYMASQMRSPSNFAFEGELVPVRLGDSS
                     PGAVLSSEEDASATASGTTGRETLQVATERAAPPVAKTTAAVPKRVAPRPEPAPQAPA
                     AERPATPAQNEVEEGTGLAAAAAEDTDTAEEPVAQPTVGVVSAGERRDV"
BASE COUNT          555 a         1282 c         1295 g          495 t
ORIGIN      
        1 tggcgacggt cgccggctgc tcccgcgtgc cgccgctcac ttcgggcagg cagatcgtga
       61 aggcggtccc ccggcccggc gaactgtccg cccacacgta gccgccgctc tgcttcacga
      121 tcccgtagac ggtggaaagc ccgagcccgg taccggaccc gaccggcttg gtggtgaaga
      181 acggctcgaa gacgtgcgcc agcgtggtgc ggtccattcc gtggcccgta tccaccaccg
      241 agatcagacc gtacgagccc tcgggaatcg ggatgccgat caagcgccgg ccggtctcct
      301 cgtccagccg acgggatccg gtggcgatcc ggatagtgcc ccccgcggtc atggcgtccc
      361 gggcgttgaa cgcgaggttg atgaggacct gctccagctg agaccgatcc gcccggacca
      421 ccgagtcgaa cggcgcgagc gacgtctcca ccctgacgtt cgccgggagc atgagccgga
      481 gcaccggcgc catctgctcg accaccgcgt tgagccgctg gtccgccggc tggagaacct
      541 gctgacggct gaaggcgagc agctgagagg tgatcctcgc cgcgcgcatc gcggccttcc
      601 ggatctcctc gacttcgcgg ggatcccccc cgccatcact acgtcggctc aggaggtcgc
      661 tgaagccgag gatgatggtc atcatgttgt tgacctcgtg ggccacgccg cccgcgaggc
      721 gtcccaccgc ctccatgcgc tgggcccggc gcagccgctc ctccgcccgc ttgaggtcac
      781 tgaggtcctg taccgtcacc accagcgagc cggcatcggt ttcgtccacc ggggtgacgt
      841 tgacgagcac cggtgccgcg actccgtccg ggcgccggac ctccgattcg tacacgcgag
      901 cttcctggcc cactccccac ggctcgggct cctcggtttc atcctgcggc agcagctccg
      961 cgatcggccg gccaagcagg ctggaagggt cctcgccgac cagccgggcg aaagcccggt
     1021 tcacggcctc gacgcggtgg tcggccgcat ccacgaccgc cgcaccccac catgcggcgt
     1081 cgaagaccgc tcgccaccgc tcgaccgctc cggactcgtc catcatcgcg cgctggacgg
     1141 ccagcgcgac ccgccgggcc aggacctggg cggtggcgaa atcgccgctg cggaagggtt
     1201 ccgcggcttc cgagcggccg agggccagcg ccccgaacgt tcgacccccc gtgcggaggg
     1261 cgaccacgat cagcgagcgc agctcgacgg tgcggatgag cgagacgagg cgacgatcgc
     1321 cgcgggtcag caggcgcatg gacgcgggtg tgacgctggg aatccaccgg gcgtagcgac
     1381 cctgccgcgc gctggcggcg gccgttgcaa cgatggcgtc cagggcggag cggacctcgc
     1441 gctcgaggcc ggggccggcg tcctgacgcg cgtgcgcggc agtgatgtgg cgggaccccg
     1501 tgtggtcgaa catgaccagc acggccattt ccgcgagcgc cggcaccacc gtgccgagcg
     1561 cgaccttggc gaccgtctcg ggctcgctgg tctccagcag cgcgcgacca ctttcttcca
     1621 ggagcgccaa ccggtcgggg cggaggtata ctgcgagatc cacgagagtg cgttccgtcg
     1681 ctagggttcg ctgaacctca taagctctgc atgttaagac aaccgtggga tttccccgcg
     1741 tgagccgggt cacaagagta ccggcgtgca acttccaccc ccgggtgcat cccccggagc
     1801 cggcccgaga gcgaaccccc gggcggcgca cccgtgtcgc ggcgcagcgt gtgtcctcgg
     1861 gcagaaactc ctgcgtccgg gccgaccagg ccggaggtga acggggtggg aggggtgccg
     1921 gcctggagga cgggcggcac gagggagaaa cggcctcccc ggtgccgctg gccgatccca
     1981 ggtcgccggt tggccggatc ccccgcagag ccgccgccaa ctcggctccc gccatggagt
     2041 tggggatgaa cgacgggggc cgcaggtcag gccttggccg gcgcgagcga ctatgattca
     2101 gcaggcgaag tgcggacgac tggccgggct ggaccggacc ggggcgcgcc aataggatct
     2161 ctgtcaccgc gggggtgggg ggtggacccg caaattcctc gtggtgcgaa tgttgccgga
     2221 gtatgcctct tatctctggg ccggcgcgat cgccggtcgc gggacagcat caggatcgcc
     2281 cagcgcggta tcgaaacgtg gcaggccatc cggggcgctg aaccgacact caggggcata
     2341 tgacggctga cctcgcccga ctcttcgacg agtattatcc ctcgctcgtc cgcatgctct
     2401 accggcggac gggggaccgg gatcgggccg aggatctggc ccaggagacg ttcgccaggg
     2461 ccgtggccgc tccaccggac aacccgcgcc cctggctctt cgccgtggca ctgaacctgg
     2521 tccgggagga tggccggaga agcgtgaccc gaggtcgccg gttggagctg ctgcgcagcg
     2581 agcaggaccg gccagccgcc ggtcccgacg tcgatttcga gcggggcgag gaggtcgcgc
     2641 gggtccgtgc ggccctggcc cggctgaacg agcgcgaccg ggaggcgctg ctgctcaagg
     2701 ccgagggttt cggatacgac gagatcgcct ccacgctggg gctggcgaag ggtgccgtag
     2761 gcaccacgct cgcacgggcc cggcggaggc tggtcgaagc gtatcgcgcg caggatcgag
     2821 gtaacaatgt cgcatcttga cgaaggcacc ctccacgccc tgctcgacgg ggagctggac
     2881 ctgcacgagg tgaaggagat tcaggcccac atcgggagtt gtgcggcctg cggcacccgc
     2941 ctgcgcgagg tcaaggagtt ccacggggag tccgaccgca tcgtggggct gctcgagctg
     3001 ccgtccacac cttcccggcg gaccgccacc gccgacccga ttcccgacgc cttcggcgaa
     3061 tccccggtgg accgccggcg caagcccagg gacccgggcc gcgtctccgg tccggcgaac
     3121 gagccgccac ccctgctgct tccggagaat ccgggctacc agcgcggcgg actgatccgc
     3181 cggatgcgtt gggcggcgct gctgctggtg acggtgggcg cgggctacat ggccagtcag
     3241 atgcggagtc cctccaactt cgccttcgag ggagagctgg tcccggtccg actgggcgac
     3301 tccagcccgg gcgccgttct gagcagcgag gaggacgcct ccgccacagc gagcggcacc
     3361 acgggaaggg agacccttca agtcgccacc gagcgggccg cgcctcccgt cgcgaagacc
     3421 acggcggccg tgccgaagcg ggtcgcccca cggcccgagc ctgcgccgca agcccccgcc
     3481 gccgaacggc ccgcgacgcc cgcccagaac gaagtcgagg aagggaccgg cctggccgcc
     3541 gctgccgccg aagacaccga taccgccgag gagccggtgg cccagccgac cgtgggcgtc
     3601 gtgagcgcgg gagagcgccg ggatgtc
//
LOCUS       DASUYN010000370         5338 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_558118, whole genome shotgun sequence.
ACCESSION   DASUYN010000370 DASUYN010000000
VERSION     DASUYN010000370.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5338)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5338)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5338
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_558118"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(108..1478)
                     /locus_tag="VF061_07235"
     CDS             complement(108..1478)
                     /locus_tag="VF061_07235"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HEX6669335.1"
                     /translation="MPETLTRALQMPAFDYQPRPYTGPSRDEVLSARRRYANPALFTL
                     YREPLMIVEGRMQYLFDETGRRYLDLFAGIVTVSCGHCHPKVTARIREQVETLQHATT
                     IYLHPGMPRLAEKLASKLPPGLDVTYFVNSGSEANDLAVTLARLYTGNIDVIALRNAY
                     HGGSPSAMGLTSHHTWKLPTLQGPYVHHALCPEPYRSRFGGSPEEVAAASAADIADLI
                     RYSTPGRIAAFIAEPIQGVGGVTSGAPGYFREAYRIAREHGGLCVADEVQTGFGRTGE
                     HYWGFENFGVVPDIVTLAKGFGNGVPLAAVVTRREIAEVLAQRLHFNTFGGNPVSMAA
                     GLAVMDVIEEDELQRNAKVVGGRFKEGLERLAAVHPIVGDVRGMGLMLGVELVADRET
                     RAPASAETLEVLEAAREMGVLLGKGGLAGNVLRIKPPMCITADDVDFALDVLDRAFAR
                     VKRQSR"
     gene            complement(1541..3019)
                     /gene="mmsA"
                     /locus_tag="VF061_07240"
     CDS             complement(1541..3019)
                     /gene="mmsA"
                     /locus_tag="VF061_07240"
                     /EC_number="1.2.1.27"
                     /inference="COORDINATES: protein motif:HMM:TIGR01722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004491 - methylmalonate-semialdehyde
                     dehydrogenase (acylating, NAD) activity [Evidence IEA];
                     GO_process: GO:0006574 - valine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-acylating methylmalonate-semialdehyde
                     dehydrogenase"
                     /protein_id="HEX6669336.1"
                     /translation="MTATAAPAAKYPAVQNYIGGRFVPAAGRTLEVLNPSDGSLLSHV
                     PLCGPAELDAAVGVAAEAFPGWSGRTIKDRVQIFYRYRTLLERDFADLATLVTEEHGK
                     TRAEAEAEIAKAIELTEFACSLPQLVTGEVLEVSRGVECRTDRHPLGVVASIVPFNFP
                     SMVPHWTIPNAIALGNCLVLKPSELVPLSAGRIAELLAEAGLPAGVFSVVHGGREVVE
                     AICDHPGIAAVSFVGSTRIAQTVYRRGTANLKRVLALGGAKNHLLVLPDADLEMTSSN
                     VVASMSGCTGQRCMAASVMVAVGGSDHIVRRLVEHARAVVPGKNLGPVISREAKQRIE
                     RYVTEAERAGATVLLDGRNAVVPGREGGFYVGPTVLDHVRPDMAIAKEEVFGPVLAIV
                     RAGDVDQALAIENASTYGNAASVFTESGGLARYVTERASAGMVGVNVGVPVPREPFSF
                     GGWNDSKFGVGDITGHGSIEFWTRAKKTTTKWNREAGVNWMS"
     gene            3180..3884
                     /locus_tag="VF061_07245"
     CDS             3180..3884
                     /locus_tag="VF061_07245"
                     /inference="COORDINATES: protein motif:HMM:NF019349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEX6669337.1"
                     /translation="MTTAPVWPLPAARTLADQVYQAVRARIMAGALAPGTFLREKDLE
                     AMGVSRTPIRDALGRLASEGFLERLPHRGFRVPEESLASLLELYPIVAALELLAGRLA
                     LERFTPDDVTGLRAINARLAEARDRGDVRGMLELNTEFHRLISERGGNRRLALLLDDL
                     RSQLTRLELWYYSGRERTQRSIQEHEEIIAAIERGDRARALELLERNMSLTWRSLVAP
                     ADPAPCDVSYAAVSPA"
     gene            complement(3860..4612)
                     /locus_tag="VF061_07250"
     CDS             complement(3860..4612)
                     /locus_tag="VF061_07250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HEX6669338.1"
                     /translation="MEWISDPQAWVGFATLTVLEIVLGIDNIIFISILASKLPPEQQG
                     KARYIGLGLAMLMRILLLFSLSWIIRLTAPLFEVLGQEISGRDLVLLLGGLFLIGKAT
                     HEIHERLEGEEGTESAKVAPSLRSVLIQIMLLDIVFSLDSVITAVGMVDEIGVMVSAV
                     VVAVAFMMVFAGPVSGFVERHPTVKMLALSFLILIGVSLVAESFDQHIPKGYIYFAMA
                     FSVMVEVLNLKSKKKAPEPVHLRKRYAGETAA"
     gene            complement(4656..>5338)
                     /locus_tag="VF061_07255"
     CDS             complement(4656..>5338)
                     /locus_tag="VF061_07255"
                     /inference="COORDINATES: protein motif:HMM:NF015369.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEX6669339.1"
                     /translation="GVRSGATEVRFRGADGGEVDNRRGSIRFERSLSLDQARESDAIL
                     AWAMNGEPLPIQHGYPLRLVVPGWYGVASVKWLTEIELSDQPFDGYYQTERYVYYWNR
                     DGREVREPVTMQKVRALITEPAPGQEASPGELVVRGVAWSGAAPIARVEVSVDGGDWR
                     EARLVGERKRHSWQWWELIARFERRGDVTLRARATDLAGRSQPEHAEWNKLGYGNNGI
                     HEVTARIV"
BASE COUNT          802 a         1891 c         1852 g          793 t
ORIGIN      
        1 cgggggctcg gcgtcctgga gatgacgctc agccccgacc agtacagctg gcggttcgtg
       61 ccgctgcccg gtgcgcccag ggcggactcg ggctcggcga cctgcgtcta gcgggactgg
      121 cgcttcaccc gcgcgaaggc gcggtccagc acgtccagcg cgaagtccac gtcgtccgcg
      181 gtgatacaca tggggggctt gatccggagc acgttcccgg cgagcccccc tttgccgagg
      241 aggaccccca tctcgcgcgc cgcctccagc acctcgaggg tctccgcgga ggccggcgcg
      301 cgggtctccc ggtcggccac cagctccacg ccgagcatga gccccatccc gcgcacgtcg
      361 cccacgatgg ggtgcaccgc ggccaggcgc tccagccctt ccttgaagcg gccgcccacg
      421 accttcgcgt tgcgctgcag ctcgtcctcc tcgatcacgt ccatcaccgc gagccccgcg
      481 gccatcgaca ccgggttgcc gccgaaggtg ttgaagtgga gccgctgggc cagcacctcg
      541 gcgatctcgc gccgggtgac gaccgccgcg agcggaaccc cgttgccgaa gcccttcgcc
      601 agcgtgacga tgtcgggaac cacgccgaag ttctcgaagc cccagtagtg ctccccggtg
      661 cggccgaagc cggtctgcac ctcgtccgcg acgcacaggc cgccgtgctc ccgcgcgatc
      721 cggtaggcct cccggaagta gccgggtgcg ccgctggtca cgccgcccac gccctggatc
      781 ggctcggcga tgaaggcggc gatgcggccg ggcgtggagt agcggatcag gtcggcgatg
      841 tcggccgcgc tcgcggcggc gacctcctcc ggcgacccgc cgaagcggct gcggtagggc
      901 tcggggcaga gggcgtggtg gacgtagggg ccctggaggg tggggagctt ccaggtgtgg
      961 tgggacgtca gccccatggc cgacggcgag ccgccatggt aggcgttccg gagcgcgatg
     1021 acgtcgatgt tgccggtgta gagccgggcg agggtgacgg cgaggtcgtt ggcttcgctg
     1081 ccgctgttga cgaaataggt gacgtcgagt cccggcggca gcttcgacgc cagcttctcc
     1141 gccagcctgg gcatgcccgg gtggagatag atcgtggtcg cgtgctgcag cgtctccacc
     1201 tgctcccgga tccgggcggt gaccttcggg tggcagtgcc cgcaggagac ggtgacgatg
     1261 ccggcgaaca ggtcgaggta gcgccggccg gtctcgtcga agaggtactg catccgcccc
     1321 tcgacgatca tcagcggctc gcggtagagc gtgaagaggg ccggattggc gtagcgccgc
     1381 ctcgccgaga gcacctcgtc acgggacggg ccggtgtagg ggcgcggctg gtagtcgaaa
     1441 gccggcatct gcaaggcgcg ggtcagcgtc tctggcatcg gtgctccagg ggtgccattc
     1501 gtctttgggt tggtcggtcg aggctcacca cgcagccggg tcaggacatc cagttcacgc
     1561 ccgcttcccg gttccacttg gtcgtcgtct tcttggcgcg ggtccagaac tcgatggagc
     1621 cgtgcccggt gatgtcgccg acgccgaact tggagtcgtt ccacccgccg aaggagaacg
     1681 gctcgcgggg caccgggacg ccgacgttga cgccgaccat gccggcgctg gcacgctcgg
     1741 tgacgtagcg ggccaggccg ccgctctcgg tgaagacgga cgcggcgttc ccgtaggtgg
     1801 aagcgttctc gatggcgagc gcctggtcca cgtccccggc ccgcacgatc gccaggaccg
     1861 ggccgaagac ctcctccttc gcgatcgcca tgtccggacg gacgtggtcg aggaccgtgg
     1921 gaccgacgta gaaaccgccc tcccggcccg gcaccacggc gttgcggccg tcgagcagga
     1981 ccgtcgcgcc cgcccgctcc gcctcggtca cgtaccgctc gatccgctgc ttcgcctcgc
     2041 gcgagatgac ggggccgagg ttcttcccgg gcaccaccgc gcgggcgtgc tcgaccaggc
     2101 ggcgcacgat gtggtcgctg ccgcccacgg ccaccatcac cgatgccgcc atgcagcgct
     2161 ggccggtgca gcccgacatc gaggcgacca cgttgctgga ggtcatctcc aggtcggcgt
     2221 cgggcagcac cagcaggtgg ttcttcgcgc cgcccagcgc cagcacccgc ttgaggttcg
     2281 ccgtcccccg gcggtagacc gtctgcgcga tccgggtcga gccgacgaag gagacggcgg
     2341 cgatgcccgg atgatcacag atggcctcga ccacctcgcg tccgccgtgc accacgctga
     2401 agacgccggc cgggagtccg gcctccgcca gcagctcggc gatccggccg gcgctgaggg
     2461 gcaccagctc ggacggcttg aggaccaggc agttgcccag cgcgatcgcg ttggggatgg
     2521 tccagtgcgg caccatgctg gggaagttga acggcacgat ggaggccacc acgccgagcg
     2581 ggtggcgatc ggtgcggcac tcgaccccgc ggctcacctc cagcacctcg ccggtcacca
     2641 gctggggcag ggagcaggcg aactcggtca gctcgatcgc cttggcgatc tccgcctccg
     2701 cctccgcccg ggtcttgccg tgctcctcgg tgaccagggt agcgaggtcg gcgaagtcgc
     2761 gctccaggag ggtgcggtag cggtagaaga tctggacccg gtccttgatc gtccggcccg
     2821 accagccggg gaaggcctcc gccgccaccc ccaccgccgc atccagctcg gccggaccgc
     2881 acaagggaac gtgggagagg agggacccgt cgctcgggtt caggacctcg agggtcctgc
     2941 cggcggcggg gacgaaccgg cctccgatgt agttctggac cgcgggatac ttggcggcgg
     3001 gagcggcggt agcggtcatg gcaagtctcg gggttgctaa gggatgagaa tgattgtatc
     3061 aagtatacaa ttcgtccata tctcgtcaac cgagtcctgg tcatcccgca aagcgaggga
     3121 ggcaaagccc gggtcatgcc cccttcgctg cgctcagggt gacaaaccgc acccaaacga
     3181 tgactaccgc ccccgtctgg cccctcccag ccgcccgcac cctcgccgac caggtgtacc
     3241 aggccgtgcg cgccaggatc atggcgggtg ccctggcccc gggcacgttc ctgcgggaga
     3301 aggacctcga ggccatgggc gtgagccgca cgcccatccg cgacgccctc ggccgcctgg
     3361 ccagcgaggg gttcctcgag cggctcccgc accgcggctt ccgggtgccg gaggagtcgc
     3421 tggcgagcct gctcgagctc tacccgatcg tcgcggccct ggagctgctc gccggccggc
     3481 tcgcgctcga gcgcttcacg ccggacgacg tcaccgggct ccgcgcgatc aacgcccgcc
     3541 tggcggaggc ccgggaccgc ggcgatgtcc ggggcatgct ggagctcaac accgagttcc
     3601 accgtctcat cagcgagcgc ggcggcaatc gccggttggc cctgctgctg gacgacctcc
     3661 ggtcccagct cacccggctg gagctgtggt actactccgg ccgggagcgc acccagcgct
     3721 cgatccagga gcacgaggag atcatcgccg ccatcgagcg gggggaccgc gcccgggcgc
     3781 tcgagctcct ggagcggaac atgtcactca cctggcgaag cctggtggcg ccggccgacc
     3841 cggccccttg cgacgtctcc tacgcggcgg tctcgcccgc gtagcgcttg cgcaggtgca
     3901 ccggctcggg cgccttcttc ttggacttca ggttcagcac ctccaccatc accgagaacg
     3961 ccatcgcgaa gtagatgtac cccttcggga tgtgctgatc gaacgactcg gccaccagcg
     4021 acaccccgat caggatcagg aagctgagcg ccagcatctt gaccgtcggg tgacgctcca
     4081 cgaacccgct gaccggcccg gcgaagacca tcatgaacgc gaccgccacg accaccgccg
     4141 agaccatgac gccgatctcg tccaccatgc ccaccgcggt gatcacggag tcgagcgaga
     4201 acacgatgtc gagcagcatg atctggatca gcacgctgcg gagcgagggc gccaccttcg
     4261 ccgactccgt gccctcctcg ccctccagcc gctcgtggat ctcgtgggtg gccttgccga
     4321 tcaggaagag cccgccgagc aggaggacca ggtcgcgtcc cgagatctcc tggcccagca
     4381 cctcgaacaa cggcgcggtg agccggatga tccacgacag cgagaacagc agcaggatgc
     4441 gcatgagcat ggccaggccc agaccgatgt agcgggcctt gccctgttgc tccggaggca
     4501 gcttgctcgc gaggatggag atgaagatga tgttgtcgat gccgagcacg atctcgagca
     4561 ccgtcagcgt ggcgaaacct acccacgcct gcggatcgct gatccattcc atagtggtcg
     4621 atgccggaag ggtggtgtac gaagggggcc ggaggtcaga cgatccgggc ggttacctca
     4681 tggatgccgt tgttgccgta gcccagcttg ttccattcgg cgtgctcggg ctggctgcgg
     4741 ccggcgaggt cggtggcgcg ggcgcggagg gtgacgtcgc ccctgcgctc gaagcgggcg
     4801 atgagctccc accactgcca gctgtggcgc ttgcgctcgc ccacgagccg agcctcgcgc
     4861 cagtcgccgc cgtccacgct cacctccacc cgggcgatcg gcgcagcgcc cgaccacgcg
     4921 accccacgga cgaccagctc gcccggtgag gcctcctgtc cgggggcggg ctcggtgatg
     4981 agcgcgcgca ccttctgcat ggtcaccggc tcgcgaacct cgcggccgtc ccgattccag
     5041 tagtacacgt agcgctcggt ctggtagtag ccgtcgaagg gctgatcgct cagctcgatc
     5101 tcggtcagcc acttcaccga cgccacgccg taccagccgg gcaccaccag ccgcagcggg
     5161 tagccgtgct ggatcgggag cggctcgccg ttcatggccc aggccaggat cgcgtccgac
     5221 tcgcgcgcct gatccagcga caggcttcgc tcgaagcgga tgctgccccg ccggttgtcg
     5281 acctcgcccc catccgcgcc gcggaagcgg acctcggtgg cgccggagcg cacgcccg
//
LOCUS       DASUYN010000371         3891 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1440768, whole genome shotgun sequence.
ACCESSION   DASUYN010000371 DASUYN010000000
VERSION     DASUYN010000371.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3891)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3891)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3891
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1440768"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2944
                     /gene="metH"
                     /locus_tag="VF061_07260"
     CDS             <1..2944
                     /gene="metH"
                     /locus_tag="VF061_07260"
                     /EC_number="2.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0008705 - methionine synthase activity
                     [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methionine synthase"
                     /protein_id="HEX6669340.1"
                     /translation="PAALRPYVQELARIAPVLVSTHPNAGLPNEFGQYDETPEKMAAV
                     LREFAEHGLVNIVGGCCGTTPDHIRAFADAVAGLPPRRPAAPPPRLRLSGLEPLTVGP
                     ETLFVNVGERTNVTGSRKFAKLVLAGAYDQGLELARQQVESGAQMLDVNMDEGMLDSQ
                     HAMTTFLRLMASEPDISRVPVVIDSSKWSVIEAGLKCVQGKSVVNSLSLKEGEEEFVR
                     QATLVRRYGAAVIVMAFDEQGQADSAERKVEICRRACRILTQRVGFPPEDIIFDPNIF
                     AIATGIEEHAGYALAYIEATRRIKAELPGVLVSGGVSNVSFAFRGNDPVREAIHAVFL
                     YHAIEAGMDMGIVNAGALPIYADIPPELLERVEDVVLDRRPDATDRLLEIADSVTGQA
                     GGGTTPDLSWRKKPVGERLAHALVEGIADWIVEDTEEARRQAERPIEVIEGPLMVGMN
                     IVGDLFGAGKMFLPQVVKSARVMKRAVAHLIPYIEAERDESAVAHNNGKVLLATVKGD
                     VHDIGKNIVGVVLQCNNYQVIDLGVMVPSARILETARREQVDLIGLSGLITPSLEEMS
                     FVAGELEREGLDLPLMIGGATTSRVHTAVKIEPHYHGPTVHVLDASRAVGVAGNLMSP
                     AVKEDFVRQVRQEYADIREQRAGRGPAERQVSLGAARANRLAIDWQAAAPPAPCAPGV
                     HVLDDYPLAELVERIDWTPFFQTWELAGHYPAILDDPVVGSAARNLFADARTLLDHIV
                     RERLLTARGVFGLFPAASVGDDIELYRSTDRGERIATIHTLRQQMVKPPGRPNLALAD
                     YVATRESEVPDHVGAFAVTTGHGLDALVAEFGSRHDDYNAILAKALADRLAEAFAERL
                     HERVRREFWGYARNESLENAALIREAYQGIRPAPGYPACPDHTEKRTLFDLLQAERSA
                     GIHLTESFAMTPTAAVSGYYFWHPDARYFGVGKIGRDQVEDYAARKGMPVGEVERWLS
                     PNLGYDRS"
     gene            2941..>3891
                     /locus_tag="VF061_07265"
     CDS             2941..>3891
                     /locus_tag="VF061_07265"
                     /inference="COORDINATES: protein motif:HMM:NF014615.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase family protein"
                     /protein_id="HEX6669341.1"
                     /translation="MKSLRDMLGDSGVHVLDGAMGTMLYSRGVFVNVCYDELTLRQPA
                     LVQEVHELYARAGAEILETNTFGANPVKLSGFGLEERTEEINRAAAQLAHRAARGRAA
                     VVGAIGPLGIRIEPWGPTARTEAVAHFVRQASGLAEGGVDGFILETFSDLEEIRAALE
                     AARSVAPDLPVMAQMTVGEDGATSYGTPVETITARLIEWGADVVGLNCSVGPAPMLEA
                     IERMAEVSTRPLSAQPNAGLPRSVGDRRIYLASPDYMAQYARRLTAAGAWFIGGCCGT
                     TPEHIRRIKECVAESRPRQVSVGSPTLAQPGPAGAQPVPLA"
BASE COUNT          613 a         1347 c         1390 g          541 t
ORIGIN      
        1 tccggccgcc ctccgtccct acgtgcagga gctcgcccgg atcgcgccgg tgctcgtcag
       61 cacccatccc aatgccgggc tgcccaacga gttcgggcag tacgacgaga cgcccgagaa
      121 gatggcggcg gtgctccgcg agttcgcgga gcacgggttg gtcaacatcg tggggggctg
      181 ctgcgggacc accccggacc acatccgcgc cttcgccgac gcggtcgccg ggcttccacc
      241 ccgccgtccg gcggcaccgc cgccgcggct ccggctcagc ggactggagc cgctcaccgt
      301 ggggccggag accctgttcg tgaacgtggg cgagcggacc aacgtcaccg ggtcgcgcaa
      361 attcgccaag ctggtcctcg ccggtgccta cgaccagggg ctggagctcg cccggcagca
      421 ggtcgagagc ggcgcccaga tgctcgacgt caacatggac gaggggatgc tcgactccca
      481 gcacgccatg acgacgttcc tccgcctgat ggcctccgag cccgacatca gccgggtccc
      541 ggtggtgatc gactcgtcca agtggtccgt gatcgaggcg gggctcaagt gcgtccaggg
      601 caagagcgtg gtcaactcgc tcagcctcaa ggagggcgag gaggagttcg tccgccaggc
      661 gacgctggtg cggcggtacg gcgcggcggt catcgtgatg gccttcgacg agcagggcca
      721 ggccgacagc gccgagcgaa aggtggagat ctgccgccgc gcctgccgga tcctcaccca
      781 gcgggtgggc ttcccgcccg aggacatcat cttcgatccc aacatcttcg cgatcgccac
      841 cgggatcgag gagcacgccg gctacgccct cgcctacatc gaggccaccc gccggatcaa
      901 ggccgagctg cccggcgtgt tggtgagcgg cggcgtgagc aacgtctcct tcgcgttccg
      961 gggcaacgac ccggtacgcg aggcgatcca cgcggtcttc ctctaccacg ccatcgaggc
     1021 ggggatggac atgggcatcg tgaacgccgg tgccctgccc atctacgccg acatcccgcc
     1081 ggagctgctc gagcgggtgg aggacgtcgt gctcgaccgg cgacccgacg ccacggaccg
     1141 gctgctggag atcgccgatt cggtgacggg ccaggccggg ggcgggacga caccggacct
     1201 ctcctggcga aagaaacccg tgggcgagcg cctggcccac gcgctggtcg aggggatcgc
     1261 ggactggatc gtggaggaca ccgaggaagc gcgccgccag gccgagcgac cgatcgaggt
     1321 gatcgagggt ccgctgatgg tggggatgaa catcgtggga gatctgttcg gcgccgggaa
     1381 gatgttcctg cctcaggtcg tgaagagcgc ccgagtgatg aagcgggccg tcgcccacct
     1441 gattccctac atcgaggccg agcgggacga gtcagccgtg gcccacaaca acggcaaggt
     1501 gctgctggcc accgtcaagg gggacgtgca cgacatcggc aagaacatcg tgggcgtggt
     1561 cctgcagtgc aacaactacc aggtcatcga cctcggcgtg atggtcccgt cggcccggat
     1621 cctggagacc gcacgccggg agcaggtgga cctgatcggg ctgagtgggc tgatcacgcc
     1681 gtcgctggag gagatgagct tcgtggcggg cgagctggag cgcgagggac tcgacctgcc
     1741 actgatgatc ggcggggcga ccacgtcgcg ggtgcacacc gcggtgaaga tcgagcccca
     1801 ctatcatggc cccaccgtgc acgtgctcga cgcctcgcgg gccgtcggag tcgccggcaa
     1861 cctcatgagc ccggcggtca aggaggactt cgtccgtcag gtgcgccagg aatacgccga
     1921 catccgcgag cagcgggcgg gccggggccc cgccgagcgc caggtgagcc tgggggcggc
     1981 ccgggcgaac cgcctggcca tcgactggca ggccgccgct ccgccggctc cctgcgcgcc
     2041 cggcgtccac gtactcgacg actatccgct cgcggagctg gtggaacgca tcgactggac
     2101 tcccttcttc cagacctggg agctggcggg tcactatccg gccatcctgg acgatccggt
     2161 cgtgggctcg gcggcgcgca acctgttcgc cgacgcccgc accctgctcg accacatcgt
     2221 ccgcgagcgg ctgctgaccg cacgcggggt cttcgggctg ttcccggctg cgtcggtggg
     2281 agacgacatc gagctctatc ggagcaccga ccgcggcgag cggatcgcca cgatccacac
     2341 cctgcggcag cagatggtga agccgccggg gaggcccaat ctcgcgctcg ccgattacgt
     2401 ggccacacgg gagagcgagg tccccgatca cgtgggggcc ttcgccgtga ccaccgggca
     2461 cgggctcgac gcgctggtcg cggagttcgg gtcgcggcac gacgactaca acgcgatcct
     2521 ggccaaggcc ctcgccgacc ggctggccga ggcgttcgcg gagcggctgc acgagcgggt
     2581 gcgccgggag ttctggggct acgcccggaa cgaatcgctg gagaacgccg ccctcatccg
     2641 cgaggcctac caaggcatcc ggccggcgcc cggctacccc gcctgccccg atcacacgga
     2701 gaagcggacg ctcttcgacc tcctgcaggc cgagcggagc gcgggcatcc acctcaccga
     2761 gagcttcgcg atgacgccga ccgccgcggt gagcgggtac tacttctggc acccggacgc
     2821 gcgctacttc ggcgtcggga agatcggccg ggatcaggtg gaggactacg ccgcccggaa
     2881 aggcatgccg gtgggcgaag tggagcgctg gctctctccg aacctcggtt acgaccggtc
     2941 atgaaatccc tgcgcgacat gctcggcgac tcgggcgtgc acgtgctcga cggcgcgatg
     3001 ggcacgatgc tctacagccg cggggtattc gtcaacgtct gctacgacga gctgactctc
     3061 cggcaaccgg ccctggtgca ggaggtgcac gagctctacg cccgcgccgg ggccgagatc
     3121 ctggagacca acaccttcgg tgccaacccg gtgaagctct cgggcttcgg cctggaggaa
     3181 cggaccgagg agatcaaccg cgccgccgcg caactcgccc atcgagcggc ccgcggccgg
     3241 gccgccgtcg tgggagcgat cggcccgctc ggcatccgga tcgagccctg gggccccacg
     3301 gcgaggaccg aggccgtcgc ccacttcgtc cgccaggcct ccgggctcgc cgaaggcggg
     3361 gtagacggct tcatcctgga gactttcagc gacctggagg agattcgcgc cgcgctggaa
     3421 gccgcccgct ccgtggcccc ggacctgccc gtcatggcac agatgaccgt gggggaggac
     3481 ggtgcgacct cctacggcac cccggtcgag accatcaccg cccggctgat cgagtggggc
     3541 gccgacgtgg tcggcctcaa ctgctcggtt ggaccggccc cgatgctcga ggcgatcgag
     3601 cgcatggcgg aggtgtccac caggcccctg tcggcccagc cgaacgcggg cctgccgcgg
     3661 tcggtgggcg accggcgcat ctatctcgcc agtcccgact acatggcgca gtacgcccga
     3721 cgactgaccg cggcgggagc gtggttcatc ggtgggtgtt gcggaacgac gccggagcac
     3781 atccgacgga tcaaggagtg tgtcgccgag tcgcgcccca ggcaggtgtc ggtcggatct
     3841 ccgacgctgg cgcagcccgg gcccgcgggg gcccagccgg tgccgctggc t
//
LOCUS       DASUYN010000372         5732 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_777767, whole genome shotgun sequence.
ACCESSION   DASUYN010000372 DASUYN010000000
VERSION     DASUYN010000372.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5732)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5732)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5732
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_777767"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..284)
                     /locus_tag="VF061_07270"
     CDS             complement(<1..284)
                     /locus_tag="VF061_07270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669342.1"
                     /translation="MISLLLALTLVQGGGPSLEATVDEERVSVGEDLLYTLRAVSHSP
                     LPMQVSVAPFTGLEIVSRSERSEVSLGADPTRTTVLEVRLRAVRPGRWQLG"
     gene            complement(281..1912)
                     /locus_tag="VF061_07275"
     CDS             complement(281..1912)
                     /locus_tag="VF061_07275"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEX6669343.1"
                     /translation="MTFDAPLLLFLAPAVALAVGFGAWLARGRRIRLARRWSPVLART
                     AKGRGGWAPFLLGLVALLAMVGLAGPRLGRIQVTTETRALSLVFAVDISRSMLAEDVA
                     PNRLQRSVREARRLIEDLGGDRLGLIAFAGQSYILAPLTVDGGAIRMYLDALDPDLAS
                     SGGSNLRSVLAQGTQLLGATTDAADRVLVLFTDGEAHDTLSEIVTQAEALDDAGVRLV
                     VVAQGKSEPVRIPLRDSAGTLTEYKQDADGSVVRTQRRDDILRAMVDAAEGTLVPSEV
                     PDQAGAVRDLVAAMKRSPTSETRTADLVPRAWIPVLVAALLLALYTLARPGPALVGLA
                     GLLVAGTAGAQRPTKGDRALAAGDPAAAAAAFLAEAGKGTARDTAFYNAGTAALEAGR
                     LDVARGALAEAAKSLDPALRYRALYNLGLVGLLAADADTTRKEEYLEDAVDRLRQALL
                     LQPSSDRAKWNLELADRRRPPPPSGGGGGGGGAPPPTGGGQQERQRTGETPRQGLSQS
                     QAEQILNSMERRERETRTEQQRRLQAGSGGGVKDW"
     gene            complement(1909..2883)
                     /locus_tag="VF061_07280"
     CDS             complement(1909..2883)
                     /locus_tag="VF061_07280"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEX6669344.1"
                     /translation="MSFARPVLLLLLLAIPLWAWRRRRQDVPAARFSDVSLPAAVSAN
                     RWWVVLPPVFRAAALAALIVAAAGPRIGGDMVEMKQEGIAIAITIDISSSMLAEDFAP
                     SNRLEVAKRQAVGFIRGRTADRIGLVAFAGEALTQVPVTLDYPVVEQAVMDLKIGSLE
                     DGTAIGSGLATAVNRLRRAPDKSKVILLLTDGENNKGLIDPRTAAATAAAFGIKVYTI
                     GVGTIGEAPIPTGRGLGGFRYELLPVRIDEPLLREIAAKTGGRYFRARDSEALSRIFR
                     QIDALEKTPVTVTRYTRYDEATRPLILLGLGALALELLIGSTLVVRVP"
     gene            complement(2880..3677)
                     /locus_tag="VF061_07285"
     CDS             complement(2880..3677)
                     /locus_tag="VF061_07285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669345.1"
                     /translation="MTPLSQGAPPTVGDTIWVSRSVELPPGRTLRPADWEAADPVELL
                     GPPRITIGDGRAQVSYPVAVWRPGSHTVSIPGPLLLAPDGGVDSLGGESVTLQVASVL
                     PRPATDTTLRPQPRADFVPRPSTTPLPLLFLLLLALAMLVPLHWWWRRRGKPVPGSAP
                     DAVGPAKPPLERWADAGETRAVAAAATTRLRLTLASRLPGALPALDTEAVLAHAAEQR
                     PDWPVAELTEVLRALDRARFGTGALPDAVALARRAADLEPRLIAEAA"
     gene            complement(3674..4558)
                     /locus_tag="VF061_07290"
     CDS             complement(3674..4558)
                     /locus_tag="VF061_07290"
                     /inference="COORDINATES: protein motif:HMM:NF024909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HEX6669346.1"
                     /translation="MAVSPEILKQVKAIELRTRGLVGTLFAGEYRSVFRGQGMEFAEV
                     RAYESGDDFRSIDWNVSARLASPYVKTFTEERELTLMLLVDQSGSTRFGEPVTKAGLA
                     VEVAAVLALAAAFHNDRVGALLFADQVERVIPPRKGRRHALRVIRDLVAFEPAGRRTN
                     LAASLSYASRLLRHHSIVVVLSDFIADGWERPLRRLAARHEVVAITVDDPREHQLPDA
                     GWIEMLDAESGRRVLVDTGSRDVRTRVSALAERRREERSRTLTSVGADEVPLETGRDY
                     AIPLRRAFARRAKRIHRG"
     gene            complement(4651..5631)
                     /locus_tag="VF061_07295"
     CDS             complement(4651..5631)
                     /locus_tag="VF061_07295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HEX6669347.1"
                     /translation="MSAPKLTEMPAETLPVPRILKEVSKRIVGQDAMVERLLVGLLTG
                     GHILLEGVPGLAKTLAVRTLAEIIHASFSRIQFTPDLLPADLIGTMVFDQKTQEFHVK
                     KGPLFAQIILADEINRAPAKVQAALLEAMQEHQVTIGGTTFPLDEPFMVLATQNPIEN
                     EGTYPLPEAQLDRFMLKVRVGYPSRDEEKEVLLRMSGGQEIPVERLLQPGSILAARAA
                     IAELYMDQKVVDYIVDLVRATRDPGSVGLLDLRPLIAFGGSPRASIALAQASRAHAFL
                     RGRNYVVPEDVRALAPDVLRHRIVLTFEAEAEDLTTDDVVAKVLGAVRVP"
BASE COUNT          836 a         2008 c         2122 g          766 t
ORIGIN      
        1 cccagctgcc agcgtcccgg ccggacggcg cggagccgga cctcgagcac ggtggtgcgg
       61 gtcggatcgg cgccgaggga aacctcggag cgctcgctgc gggagacgat ctcgaggccg
      121 gtgaaagggg cgaccgacac ctgcatgggg agcggggaat ggctcacggc gcgcagggta
      181 tagagcaggt cctcgcccac cgacacgcgc tcctcgtcca cggtggcctc gagcgagggg
      241 ccgcccccct gcaccagcgt gagcgcgagc agcagcgaga tcaccagtcc ttgactcctc
      301 caccggagcc ggcctggagc cggcgctgct gctcggtccg ggtctcccgc tcgcggcgct
      361 ccatcgagtt caggatctgc tccgcctgac tctgggagag cccctggcgt ggcgtctcgc
      421 ccgtgcgctg tcgctcctgc tggccgccgc cggtcggcgg tggagcgccg ccgcccccgc
      481 ctccacctcc gctggggggc gggggccggc gccgatcggc cagctcgagg ttccacttgg
      541 cccggtcgga cgacggctgg agcagaagcg cctggcgcag ccggtcgacg gcgtcctcca
      601 ggtattcctc cttccgggtg gtgtcggcgt cggcggcgag caggcccacg agtcccaggt
      661 tgtagagcgc gcggtagcgg agagccggat cgagggactt cgcggcctcc gcgagcgcgc
      721 cccgggccac gtccaggcgc ccggcctcga gcgcggcggt gcccgcgttg tagaaggcgg
      781 tgtccctcgc ggtgcccttc cccgcctccg cgaggaaggc ggccgcggcg gctgccgggt
      841 ccccggcagc gagcgcgcgg tcccccttcg tcggccgctg cgctccggcg gtgccggcga
      901 cgaggagccc ggcgagaccc accagtgccg gccccggccg cgccagggta tagagcgcga
      961 gcagaagggc ggccacgagc accggaatcc aggcgcgcgg taccaggtcg gcggtccggg
     1021 tctccgaggt cgggctgcgc ttcatcgcgg cgaccaggtc gcgcacggcg cccgcctggt
     1081 ccggtacctc gctcggcacc agggtcccct cggccgcatc caccatcgcc cggaggatgt
     1141 cgtcgcggcg ctgggtccgt accacggagc catcggcgtc ctgcttgtac tcggtgaggg
     1201 tgccggcgga gtcgcggagg ggaatccgga ccggctccga cttgccctgg gctacgacca
     1261 ccagcctgac gcccgcgtca tcgagcgcct ccgcctgggt gacgatctcg ctcagggtgt
     1321 cgtgggcctc accgtcggtg aacagcacga gcacgcgatc ggcggcgtcc gtcgtcgcac
     1381 cgaggagctg ggtgccctgg gcgagcacgg accgaaggtt ggagcccccg ctgctcgcga
     1441 ggtcgggatc gagggcgtcg aggtacatcc ggatcgcgcc gccgtccacg gtgagcggcg
     1501 ccaggatgta gctctgtccc gcgaaggcga tcaggcccag ccggtcgccg ccgagatcct
     1561 cgatgagccg ccgggcctcg cgcaccgagc gctggagccg gttcggggcg acatcctcgg
     1621 ccagcatgga gcggctgatg tccactgcga agaccaggct cagcgcgcgg gtctcggtgg
     1681 tgacctgaat gcgcccgagc cgcggcccgg cgagtcccac catcgccagc agcgcgacga
     1741 gacccagcag gaacggggcc catccgcccc gccccttggc ggtgcgcgcc agcaccggcg
     1801 accaccggcg ggcgagccgg attcggcgac cgcgggcgag ccaggcgccg aagccgacgg
     1861 ccagcgcgac cgccggggcc aggaagagaa ggaggggggc gtcgaaggtc acgggacccg
     1921 caccaccagc gtgctgccga tgaggagctc cagcgcgagg gcgccgagcc cgagcaggat
     1981 gagcgggcgg gtggcctcgt cgtaccgggt gtaccgggtc accgtcaccg gtgtcttctc
     2041 caacgcgtcg atctggcgga agatccggct cagggcctcg ctgtccctgg cgcggaagta
     2101 gcgcccgccg gtcttggcgg cgatctcgcg gagcagcggc tcgtcgatcc gcaccgggag
     2161 gagctcgtag cggaacccgc ccagaccgcg gccggtcggg atcggagcct cgccgatcgt
     2221 gcccacgccg atggtgtaca ccttgatccc gaaggcggcg gcggtcgcgg ccgcggtgcg
     2281 ggggtcgatc agtcccttgt tgttctcgcc gtcggtgagg agcaggatca ccttcgactt
     2341 gtccggcgcg cgccgcagcc ggttgaccgc ggtggcgagc ccgctgccga tggcggtccc
     2401 gtcctccagg ctcccgatct tgaggtccat caccgcctgc tccaccaccg ggtagtcgag
     2461 ggtcaccggc acctgggtca gcgcctcgcc ggcgaaagcc accaggccga tgcgatccgc
     2521 cgtccgccca cggatgaacc ccacagcctg gcgcttggct acctccagcc ggttcgacgg
     2581 cgcgaaatcc tcggccagca tgctgctgga gatgtcgatg gtgatggcga tggcgatgcc
     2641 ttcctgcttc atctccacca tatcgccgcc gatgcgtggt ccggccgcgg cgacgatcag
     2701 cgcggcgagc gcggccgcgc gaaagaccgg cggcagcacg acccaccacc ggttggccga
     2761 gacggcggcc gggagggaga cgtcgctgaa gcgggcggcc ggcacgtcct gccgccggcg
     2821 acgccaggcc cagagcggga tggcgaggag gagcagcagc aggaccggcc gggcgaagct
     2881 cacgccgcct ccgcgatcag gcgcggctcg agatcggcgg cgcgccgcgc cagggcgacg
     2941 gcgtcgggca aggcaccggt cccgaagcgc gcccggtcca gggccctgag cacttcggtc
     3001 agctcggcca cgggccagtc gggtcgctgc tcggcggcat gggcgaggac cgcctcggtg
     3061 tcgagcgcgg ggagggcgcc cgggagccgg gaggcgagcg tgagccggag gcgcgtggtt
     3121 gccgccgcgg cgacggcacg cgtttcgccc gcgtcggccc agcgctcgag cgggggcttg
     3181 gccggcccaa ccgcgtcggg ggcggacccg ggcaccggct tcccgcggcg gcgccaccac
     3241 cagtgcagtg ggaccagcat cgcgagcgcc agcagaagca gaaagagcag cgggagtggc
     3301 gtggtggaag gacgaggcac gaagtcggcc cggggctgcg gccggagcgt ggtgtcggtg
     3361 gccggtcgcg gcaacacgct ggccacctgg agcgtcacac tctcaccgcc gagcgagtcc
     3421 accccgccat ccggcgcgag caggagcggt cccgggatgc tcaccgtgtg ggacccgggc
     3481 cgccacaccg cgaccggata agacacctgg gcccggccat cgccgatggt gatccgcggc
     3541 ggccccagca actccaccgg gtcggcggcc tcccaatcgg cggggcgcag ggtgcgcccg
     3601 gggggcagct ccacgcttcg ggacacccag atggtgtctc ctacggtggg gggggcgccc
     3661 tgcgacagcg gggtcatccc cgatgaatcc gcttggcccg gcgggcgaat gcccgccgca
     3721 acgggatggc gtaatcccgc ccggtctcga gcggaacctc gtccgcgccc accgaggtga
     3781 gggtccggct ccgctcctcc cggcgtcgct ccgcgagcgc cgacacccgg gtccggacat
     3841 cgcggctgcc ggtgtccacc agcacccgac ggcccgactc ggcatcgagc atctcgatcc
     3901 accccgcgtc gggcagctgg tgctcgcggg ggtcgtccac cgtgatcgcg acgacctcgt
     3961 gtcgcgccgc cagacgacgc agcggccgct cccacccgtc ggcgatgaag tcggagagca
     4021 ccacgacgat gctgtggtgc cggagcagtc ggctggcgta ggagaggctg gccgcgagat
     4081 tggtgcgccg gcccgcgggc tcgaaggcca cgaggtcgcg gatgacgcgc agcgcgtggc
     4141 ggcgcccctt ccgcggggga atgacccgct ccacctgatc ggcgaagagc agcgcgccga
     4201 cccggtcgtt gtgaaacgcc gccgcgagcg cgagcaccgc cgcgacctcg accgcgagcc
     4261 cggccttggt gaccggctcg ccgaagcggg tcgagcccga ctggtccacg agcagcatca
     4321 gcgtcagctc gcgctcctcg gtgaaggtct tcacgtaggg actggcgagc cgggcggaga
     4381 cgttccaatc gatggagcgg aagtcgtccc ccgactcgta ggcgcgcact tcggcgaatt
     4441 ccatgccctg cccgcggaac accgagcggt actctcccgc gaacagcgtg cccacgagcc
     4501 cgcgggtgcg gagctcgatc gccttcacct gcttcaggat ttcgggggag acagccatac
     4561 agtaagagcg tgaaacgtga aaggtgaaaa gtgaagaggg gcctacccgc cagccctttt
     4621 cacttttcac ctttcacgtt tcacgtcctt tcaaggaacc ctcaccgcgc caaggacctt
     4681 ggccaccacg tcgtcggtcg tgagatcctc ggcctcggcc tcgaaggtga ggacgatgcg
     4741 gtggcggagg acgtcggggg cgagggcgcg cacatcctcg ggaacgacgt agttgcggcc
     4801 gcggaggaag gcgtgggccc gcgaggcctg cgccagggcg atggaggcgc ggggggagcc
     4861 gccgaacgcg atcaacggcc tgagatcgag aaggccgacg ctcccgggat cccgggtggc
     4921 ccgcacgagg tcaacgatgt agtccaccac cttctggtcc atgtacagct cggcaatggc
     4981 cgcacgggcg gcgaggatcg agccgggctg gagcaggcgc tcgaccggga tctcctgacc
     5041 cccgctcatc cggagcagaa cctccttctc ctcgtcccgg ctcggatagc ccacccggac
     5101 cttgagcatg aaccggtcga gctgggcctc gggcagcggg taggtgcctt cgttctcgat
     5161 ggggttctgg gtcgccagca ccatgaacgg ctcgtccagc gggaaggtgg tgccgccgat
     5221 ggtgacctgg tgctcctgca tcgcctccag cagcgccgcc tgcaccttgg caggtgcgcg
     5281 attgatctcg tcggccagga tgatctgggc gaacagcggc cccttcttga cgtggaactc
     5341 ctgggtcttc tggtcgaaga ccatggtgcc gatcaggtcg gcgggcagga ggtcgggcgt
     5401 gaactgaatg cgggagaacg aggcgtggat gatctcggcg agcgtccgca cggcgagcgt
     5461 cttggcgaga ccgggcacgc cctcgaggag gatatggccc ccggtcagga gcccgacgag
     5521 cagccgctcg accatggcat cctggccgac gatccgcttc gatacctcct tgaggatgcg
     5581 agggaccggc agcgtctccg ctggcatctc cgtcagcttc ggcgcgctca cgctggaggg
     5641 ctcctggggt tggatggggg aaagatagcc gggacggcgt catcccgagc cgggataacg
     5701 tcatccccag cgctgcgagg taccttgccc gc
//
LOCUS       DASUYN010000373         3899 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1661808, whole genome shotgun sequence.
ACCESSION   DASUYN010000373 DASUYN010000000
VERSION     DASUYN010000373.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3899)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3899)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3899
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1661808"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1601
                     /locus_tag="VF061_07300"
     CDS             <1..1601
                     /locus_tag="VF061_07300"
                     /inference="COORDINATES: protein motif:HMM:NF014895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="putative PEP-binding protein"
                     /protein_id="HEX6669348.1"
                     /translation="ACDMVDEGLISEEEAVARIPPNDLNQLLHPTIDPGSKLDLLTTG
                     LPASPGAACGTAVFDADRAEKMGRAGQSAILVRRETSPEDFHGMVMAKAILTARGGMT
                     SHAAVVARGMGKPCVAGAQELQVDEKAGRFSINGRSVAEGDWITVDGGTGKVYAGQAA
                     LITPEPSGNFLRLMQWADRIRQLRVRVNADTPADAHRGRDFGAEGIGLCRTEHMFFDG
                     ERLTAMREMIVAPDKPGRERALAKLLPMQRGDFEAIFRAMEGYPVTIRLLDPPLHEFL
                     PHDTAELESLAAELERPVDELQALVHRLQEVNPMLGLRGCRLGIIYPEITAMQVRAIF
                     EAACTVASRKGRVMPEVMIPLTASVVEFRKQAFIVRQVAEEVFRERQITVPFLLGTMI
                     ELPRACVTADELAREAQFFSFGTNDLTQTTWGLSRDDAGHFLPYYLEHGVIEADPFQV
                     LDQAGVGKLIQMACELGRRTRNDLKLGICGEHGGEPGAVAFCDRLGMNYVSCSPFRVP
                     IARLAAAQAALAARGTMDRTRATV"
     gene            complement(1709..2053)
                     /locus_tag="VF061_07305"
     CDS             complement(1709..2053)
                     /locus_tag="VF061_07305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669349.1"
                     /translation="MSEQPNARPAPRGTAEMTPAEILVRAVLDHRTVSLVYDGLRRVV
                     EPHLVGIHQAGEPMVAAFQTGGFSQSGDLPGWRTFITTKIESVDPREETFTPRSDCDR
                     MAEGMVEVFART"
     gene            2187..2684
                     /gene="purE"
                     /locus_tag="VF061_07310"
     CDS             2187..2684
                     /gene="purE"
                     /locus_tag="VF061_07310"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: protein motif:HMM:TIGR01162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009320 - phosphoribosylaminoimidazole
                     carboxylase complex [Evidence IEA];
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HEX6669350.1"
                     /translation="MAEPVVGVVMGSDSDWETMQHAARRLEELGIPFECRVVSAHRTP
                     DLLFRYAEEAAGRGLRCIIAGAGGAAHLPGMLAAKTALPVFGVPVPGKHLQGLDSLLS
                     IVQMPAGIPVATFAIGAAGAQNAALCVAAVLALGDGELAQRLEKLRREQTRRVLDLQL
                     PGERS"
     gene            2681..3826
                     /locus_tag="VF061_07315"
     CDS             2681..3826
                     /locus_tag="VF061_07315"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: protein motif:HMM:NF004679.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HEX6669351.1"
                     /translation="MILPGATIGVLGGGQLGRMFVLRARTMGYRTAVLDPDVRSPAGQ
                     VADLHLRSAYTDVSALDRLGAECAAVTTEFENVPAEALERLARSCRVRPPVETVAVTQ
                     DRISEKQFLERAGFPTAPFRPVREEGELRTAIREIALPALLKTSRLGYDGKGQALVER
                     AEDGLAAFRRLGGVACVFEERLALESEVSVVLARGDDGAVAAFPVGENRHRDGILETT
                     VVPARVPRAIVDEARATACRVAAALGYVGVLGVEMFVANGGRIYVNELAPRPHNSGHY
                     TLDACSVDQFEQQLRALCALPLAEPRLLTPVAMINLLGDLWASGEPRWAEVFRRPGVR
                     LHLYGKVEPRPGRKMGHLNCLADDPDRALALALETRDALDASTTHPE"
BASE COUNT          564 a         1379 c         1395 g          561 t
ORIGIN      
        1 tcgcctgcga catggtggac gaggggctga tctcggagga ggaagcggtc gcgcgcatcc
       61 ctcccaacga cctcaaccag ctcctgcatc ccaccatcga tccgggcagc aagctcgacc
      121 tcctcaccac cgggcttccc gcgagtcccg gcgcggcctg cggcaccgcg gtgttcgacg
      181 ccgaccgggc agaaaagatg ggccgtgccg gccagtccgc gatcctggtg cggcgggaga
      241 cgtcccccga ggacttccac ggcatggtca tggccaaggc gatcctcacc gcgcgcggcg
      301 ggatgacgtc ccacgcggcc gtggtcgcgc gggggatggg caagccttgc gtggcgggcg
      361 cgcaggagct ccaggtggac gagaaggcgg gccgcttctc catcaacggc cgcagcgtcg
      421 ccgaaggcga ctggatcacg gtggacgggg gcacgggcaa ggtgtacgcg ggccaggccg
      481 cgctcatcac cccggagccc agcgggaact ttctccggct catgcagtgg gccgaccgga
      541 tccgccagct ccgggtgcgg gtgaacgcgg acacgccggc cgacgcgcac cggggccgtg
      601 acttcggcgc ggagggcatc gggctgtgcc gcaccgagca catgttcttc gacggcgagc
      661 ggctcacggc gatgcgggag atgatcgtcg cacccgacaa gccggggcgg gagcgcgcgc
      721 tggccaagct gctgccgatg cagcggggag acttcgaggc catcttccgc gcgatggagg
      781 gctatccggt caccatccgg ctgctggacc ccccgctcca cgagttcctg ccgcacgaca
      841 cggcggagct cgagtccctg gccgccgagc tggagaggcc ggtggacgag ctgcaggcgc
      901 tggtgcaccg cctccaggag gtgaacccca tgctcggcct gcgcggctgc cggctgggaa
      961 tcatctatcc cgagatcacc gccatgcagg tgcgggcgat cttcgaggcc gcctgcaccg
     1021 tcgcctcccg gaaaggccgg gtcatgccgg aggtgatgat cccgctcacc gccagcgtgg
     1081 tcgagttccg gaagcaggcc ttcatcgtgc gccaggtggc ggaggaggtc ttccgcgagc
     1141 ggcagatcac ggtgcccttc ctgctgggca ccatgatcga gctcccccgc gcctgcgtca
     1201 cggccgacga gctggcgcgc gaggcgcagt tcttctcctt cggcaccaac gacctcaccc
     1261 agaccacctg gggcctgagc cgggacgacg ccggccactt cctgccatac tacctggagc
     1321 acggcgtgat cgaggccgat cccttccagg tgctggacca ggccggcgtg ggcaagctga
     1381 tccagatggc ctgcgagctg ggtcggcgga cgcggaacga cctcaagctc ggcatctgcg
     1441 gcgagcatgg cggcgagccg ggcgccgtgg cgttctgcga ccggctgggg atgaactacg
     1501 tcagctgctc ccccttccgg gtcccgatcg cgcggctggc cgcggcccag gcggcgttgg
     1561 cggcgagggg caccatggac cgtacccggg cgacggtata ggctgcgcgg agaaaggctg
     1621 gagcggaatg tcaccctgaa cgcagtgaag ggggccatgt gggcatggtc cccttcactg
     1681 cgttcagggt gacactcccc ccaagtccct aggtcctcgc gaacacctcg accattccct
     1741 ccgccatccg gtcgcaatcc gagcggggtg tgaacgtctc ctcccgcggg tccaccgatt
     1801 cgatcttcgt ggtgatgaac gtgcgccagc cgggcagatc gccggactgg ctgaagccgc
     1861 cggtctggaa cgccgcgacc atcggctcgc cggcctggtg gatgccgacc aggtggggct
     1921 cgaccacccg tcgcagtccg tcgtacacca ggctcaccgt ccgatggtcg agcacggcac
     1981 gaaccaggat ctccgccggg gtcatctcgg cagtcccccg gggggcgggc cgggcattgg
     2041 gttgctcact catcgctgcc tcctcaacca agggcatcgg gaacgtaggc caccgccgga
     2101 gcgcgcaccg tgaccgctga ccgtcccggc ttgcctgcgc gcgcgtgcgc gatgttcttt
     2161 ccacccaacc aagcgccgag gagatcatgg ccgagcccgt cgtgggcgtg gtgatgggaa
     2221 gcgactccga ctgggagaca atgcagcacg ccgcccgccg cctggaggag ctgggcattc
     2281 cgttcgagtg ccgcgtggtc tccgcccacc ggacccccga cctcctgttc cgctacgcgg
     2341 aggaggcggc cggccgcggg ctccggtgca tcatcgcggg cgcgggcggc gcggcccacc
     2401 tgccgggcat gctggccgcg aagaccgcgc tcccggtctt cggggtgccg gttcccggca
     2461 agcacctcca ggggctcgac tcgctgctct cgatcgtgca gatgcccgcg ggcattcccg
     2521 tcgccacctt cgccatcggc gccgcgggcg cacagaacgc cgccctctgc gtggcggccg
     2581 tgctcgcgct gggcgacggc gagctggccc agcggctcga gaagctgcgg cgggagcaga
     2641 cgcgccgggt gctcgatctg cagctgcccg gggagcgctc gtgatcctgc ccggcgccac
     2701 gatcggcgtg ctgggcggag gacagctggg gcgaatgttc gtgctgcggg cacgaaccat
     2761 gggctaccgc accgcggtcc tggatcccga tgtccggagc ccggcgggcc aggtcgccga
     2821 tctgcacctc cgctcggcgt acaccgacgt ttcggccctc gatcgtctcg gagcggaatg
     2881 cgccgcggtg accacggagt tcgagaacgt tcccgccgaa gcgctggagc gcctcgcgcg
     2941 ctcgtgtcgg gtgaggcccc cggtggagac ggtcgccgtc acccaggacc gcatcagcga
     3001 gaagcagttt ctcgagcggg cggggttccc cacggcaccg ttccgcccgg tgcgtgagga
     3061 gggcgagctc cggaccgcga tacgcgagat cgcgctcccc gccctgctca agaccagtcg
     3121 gctgggatac gacggcaagg ggcaggccct cgtggagcgg gcggaggacg ggctcgccgc
     3181 gttccggaga ttgggcggcg tggcctgcgt cttcgaagag cgactggcac tggagagcga
     3241 agtctccgta gtgctggcac ggggcgacga cggcgcggtg gccgcgttcc ccgtgggcga
     3301 gaaccggcac cgcgacggga tcctggagac gacggtcgtg ccggcccggg tgccccgcgc
     3361 catcgtggac gaggcgcgcg ccaccgcctg ccgcgtggcc gccgccctgg gctacgtggg
     3421 ggtgctcggg gtcgagatgt tcgtggccaa cgggggccgg atctacgtca acgagctggc
     3481 gccccggccc cacaacagcg gccattacac actggacgcc tgctccgtgg atcagttcga
     3541 gcagcagctc cgcgccctgt gtgcgcttcc cctggccgag ccacggctgc tgacgccggt
     3601 ggccatgatc aacctgctcg gcgacctctg ggcgtcgggc gagccgcgct gggcagaggt
     3661 gttccgccgc cccggcgtcc ggctgcacct ctacggcaag gtggagccga ggccgggccg
     3721 gaagatgggt cacctgaact gcctcgccga cgatcccgac cgggcgctcg cgctcgccct
     3781 ggagaccaga gacgccctcg atgcttccac cactcacccg gagtagttcc gcatgtcgat
     3841 gcacctcacc ctggccctgc tgagcctcgc gaacgccccc gtcccggccg tcgcggaca
//
LOCUS       DASUYN010000374         3243 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_559195, whole genome shotgun sequence.
ACCESSION   DASUYN010000374 DASUYN010000000
VERSION     DASUYN010000374.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3243)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3243)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3243
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_559195"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..767
                     /locus_tag="VF061_07320"
     CDS             <1..767
                     /locus_tag="VF061_07320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cation acetate symporter"
                     /protein_id="HEX6669352.1"
                     /translation="LMRFYTVPDARAARASVFVATGLIGLFYLLTFVLGFGAMVLVGP
                     DRIRAVDPGGNMAAPLLAELLGGTPFLGFIAAVAFATILAVVAGLTLSGAAALSHDLW
                     VSIVRRGHADQGEQLKVARVATLALGVVAVALGITFKGQNVAFMVSLAFAIAASANFP
                     ALILAIFWRGYTTAGAVTSMAAGTVLTLVLIYLSPTLQVDILGRETAWFPLKNPALVT
                     MPLSFAAGILVSLLAPEPSAAAGYDAVERRMHLGER"
     gene            1002..1811
                     /gene="speB"
                     /locus_tag="VF061_07325"
     CDS             1002..1811
                     /gene="speB"
                     /locus_tag="VF061_07325"
                     /EC_number="3.5.3.11"
                     /inference="COORDINATES: protein motif:HMM:NF012703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008783 - agmatinase activity [Evidence
                     IEA];
                     GO_process: GO:0008295 - spermidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="agmatinase"
                     /protein_id="HEX6669353.1"
                     /translation="MTKVALLGIPYDASSSFQRGTAGAPVVIREALWSEAGNAWSETG
                     IDLKAGGLEDDGDLWFSEREPGEEARGRIEQAVGSILDSGRRPLLLGGDHSITYPALR
                     GLRAHYPRLAVLHFDAHPDLYDEFQGDRYSHACPFARVMEEGLADRLVQVGIRTMTGH
                     QREQAQRFGVEVLEMRSWRDWAPIRFDTPVYLSLDLDALEPGLAPGVSHREPGGLTVR
                     QILDILHALEAPLAGADVVELNPQNDPSGLTAAVAAKLVKEIAARLLMETR"
     gene            1808..3232
                     /locus_tag="VF061_07330"
     CDS             1808..3232
                     /locus_tag="VF061_07330"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX6669354.1"
                     /translation="MIRLALALLLLLAPPLAAQHAAGIDYPKLREETAQRLSEYIRIN
                     TSNPPGNELAAARWLADVLAKEGIQGMILDSAELGIGRANFYARLPGRTGGRGIALVH
                     HMDVVTASAGEWVVDPFGGERRDGHVWGRGALDMKGHGIIQLMAFIALKRARVPLTRD
                     LVYVGNADEEIGGLGSRTFVERHPDLVKHIEYVLTEGADTRVEKGAVRWFGVGVGEKR
                     TWWKKLVARGTTSHGSVPLGDNPVDRLIRALNRIVAYETPIRLTPAVDRFFKAQARDQ
                     TGPGKAWLSDAAAALATKEGRAWILGEPERNALLRTTITPTVLQGSEKTNIIPQEASV
                     ELDIRLLPDEDTVAFRRTLERLIADPKIRIEAIGDMAPPYGAPLDTEMFRALERVAAR
                     MLPGIPVSTTMSSGATDRPYWSAAGPIPYGIDPYLVELEESRYSVHGNDERLSLENIE
                     FGLRFYVETILEMAGRQDSARMSP"
BASE COUNT          477 a         1101 c         1150 g          515 t
ORIGIN      
        1 tcctgatgcg cttctacacc gtgccggacg cccgcgcggc gcgggcctcg gtcttcgtgg
       61 cgaccgggct gatcgggctc ttctacctcc tcaccttcgt gctcggcttc ggggccatgg
      121 tgctggtggg gccggaccgg atccgggcgg tggacccggg cggcaacatg gccgccccgc
      181 tcctggcgga gctgctcggc gggacgccgt ttctcggctt catcgcggcc gtggcgttcg
      241 ccaccattct cgccgtcgtg gcgggcctga cgctctcggg cgcggccgcg ctgtcgcacg
      301 acctgtgggt gagcatcgtg cgccgcggcc acgcggacca gggggagcag ctcaaggtcg
      361 cccgggtggc gacgctcgct ctcggcgtgg tggcggtcgc gctgggcatc acgttcaagg
      421 gtcagaacgt cgcgttcatg gtctcgctgg ccttcgccat cgcggccagc gccaactttc
      481 ccgccctcat cctcgcgatc ttctggcggg gctacacgac ggccggcgcg gtcaccagca
      541 tggcggcggg aacggtgctc accctggtgc tgatctacct gtccccgacc ctccaagtgg
      601 acatcctggg ccgggagacc gcctggttcc cgctgaagaa cccggcgctg gtgaccatgc
      661 ccctctcgtt cgcggccggc atcctcgtct ccctgctcgc gcccgagccg tccgccgccg
      721 ctggctacga cgccgtcgag cggcggatgc atctcgggga gcggtgatcg tggctggctg
      781 ccgggtaccc ccccaaccaa aggattcacc acgaaggcac gaagagcacg aagggctccg
      841 atgtggagaa atgcatcgga gtccacaaca gctttttttc ttgttgtttt tcttcgtgtc
      901 cttcgtgtcc cttcgtgcct tcgtggtgaa tctttcttgg gtggagaggc ggacttcgtg
      961 gtgaaggaaa tgggtaacac cctagcctgc caggtgaaac gatgaccaag gtcgccctgc
     1021 tcggcattcc gtacgacgcc tcgtcctcct ttcagcgagg gacggcgggt gcgcccgtcg
     1081 tcatcagaga ggcgctctgg tcggaggcgg ggaacgcctg gagcgagacc gggatcgacc
     1141 tcaaggccgg tggcctcgag gacgacggcg acctgtggtt cagcgagcgg gagccgggcg
     1201 aggaggcgag ggggcggatc gagcaggccg tggggtcgat cctcgactcc ggccgccggc
     1261 cgctgctgct cggcggagac cactcgatca cctacccggc cctgcgcggt ctccgggctc
     1321 actatccccg gctcgccgtc ctgcacttcg acgcgcaccc cgatctgtac gacgagttcc
     1381 agggcgaccg gtactcccac gcatgtccct tcgcccgggt catggaggag ggcctcgccg
     1441 accggttggt gcaggtcggc atccggacga tgaccggcca ccagcgggag caggcgcagc
     1501 gcttcggggt ggaggtgctg gagatgcgga gctggcgcga ctgggcgccg atccgcttcg
     1561 acacgccggt ctatctctcc ctcgacctcg atgccctgga gccggggctg gcgccgggtg
     1621 tctcccaccg tgagcccggc ggcctcaccg tccggcagat tctcgacatc ctccacgcgc
     1681 tggaggcgcc gctggccggc gccgacgtgg tggagctcaa cccgcaaaac gacccttcgg
     1741 gactcaccgc cgcggtggcc gccaagctgg tgaaggagat cgccgctcgc ctgctgatgg
     1801 agaccagatg atccggctcg cgctcgcgct cctcctcctg ctcgccccgc cgctggccgc
     1861 gcagcatgcg gcagggatcg actaccccaa gctccgcgag gagaccgcgc agcggctctc
     1921 ggaatacatc cggatcaaca ccagcaaccc gcccgggaac gagctggccg cggcccgctg
     1981 gctggcggac gtgctggcga aagaggggat ccaggggatg atcctcgaca gcgccgagct
     2041 gggcatcggg cgggccaact tctacgcccg gttgccgggc cggacgggcg gaaggggaat
     2101 cgcgctggtc caccacatgg acgtggtgac cgccagcgcc ggggagtggg tggtggatcc
     2161 cttcggcggc gagcgacgcg atggccatgt ctggggccgg ggcgccctcg acatgaaggg
     2221 ccacggcatc atccagctga tggcgttcat cgccctcaag cgggcccgag tcccgctcac
     2281 gcgggacctg gtctacgtcg gcaacgcgga cgaggagatc gggggcctgg ggtcgaggac
     2341 cttcgtcgag cgccaccccg atctggtgaa gcacatcgag tacgtcctca ccgagggggc
     2401 ggacacgcgg gtggagaagg gcgcggtccg gtggttcggg gtgggtgtgg gcgagaagcg
     2461 cacctggtgg aagaagctgg tggcgcgtgg cacgacttcg cacggctcgg tgccgctggg
     2521 tgacaacccg gtggatcggc tgatccgcgc cctgaaccgg atcgtagcct acgagacgcc
     2581 gatccggctc acgccggcgg tggaccggtt cttcaaggcg caggcgcggg accagacggg
     2641 ccccggcaag gcctggctct cggacgcggc cgccgccctc gcgacgaagg agggacgggc
     2701 gtggatcctg ggcgagcccg agcgcaacgc gctgctccgg accacgatca cccctaccgt
     2761 gctccagggc tcggagaaga ccaacatcat tccccaggag gcctcggtcg agctcgacat
     2821 ccggctcctg ccggacgagg acacggtcgc cttccggcgg acgctggagc gactcatcgc
     2881 cgaccccaag atccggatcg aggccatcgg cgacatggcg ccgccttacg gggcgccgct
     2941 cgataccgag atgttccggg cgctcgagcg cgtggccgcg cggatgctgc ccggcatccc
     3001 ggtgtccacg accatgagct ccggcgccac cgaccgcccc tactggtccg cggcgggccc
     3061 catcccctac ggcatcgatc cgtatctggt ggagctggag gagagccgct actcggtgca
     3121 cggcaacgac gagcggctgt cgctggagaa catcgagttc gggctcaggt tctacgtgga
     3181 gacgattctg gagatggcgg gacggcagga cagtgcccgt atgtcaccct gagcgaagcg
     3241 aag
//
LOCUS       DASUYN010000375         3155 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1222263, whole genome shotgun sequence.
ACCESSION   DASUYN010000375 DASUYN010000000
VERSION     DASUYN010000375.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3155)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3155)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3155
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1222263"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            152..517
                     /locus_tag="VF061_07335"
     CDS             152..517
                     /locus_tag="VF061_07335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HEX6669355.1"
                     /translation="MLQPYLPILLLVAFVIANAVLMLAVSHVFSTYRRTPTKIAPYES
                     GMPVLGDARERFSIKFYLVAMLFIIFDIETVFMIPWAVAFRQLQDMAGLLIIEMFVFI
                     VILAVGYVYIWKRGAFQWD"
     gene            508..1137
                     /gene="nuoB"
                     /locus_tag="VF061_07340"
     CDS             508..1137
                     /gene="nuoB"
                     /locus_tag="VF061_07340"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoB"
                     /protein_id="HEX6669356.1"
                     /translation="MGLSNPAGQNRGEETTTVSAVSPNWVTTRLDFLTNWARANSLWP
                     MPFGTACCAIEYMATAASRFDIARFGMERQSFSPRQADVLICAGRLPFKLAPVIRRIW
                     DQMPQPKWSISMGACASTGGIFDNYSMVQGIDTIIPVDVYVPGCPPRPEGLMYGILLL
                     QKKIKGESFTDPSLRQEQLVGPSGLFLPPERVDELSEPFGNSVHQTRSA"
     gene            1208..1810
                     /locus_tag="VF061_07345"
     CDS             1208..1810
                     /locus_tag="VF061_07345"
                     /inference="COORDINATES: protein motif:HMM:NF012549.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HEX6669357.1"
                     /translation="MTVPALRAEFDAAIERHLVSCGDTIVYVSRDRSHDVLAWLRDAP
                     AQRFDYLTDVTAVDYRDPERPLEVVYQLRALARRADLRVKVALDKREPLEVRSVVDLW
                     RGADWLEREVYDMFGVVFTGHPDLRRILMWETYAEGYPLRKDFPLRGHFSRAEQTRQA
                     LAANPEAHYSLEELSIAEAYDELPAEVRARLSRGERGFLR"
     gene            1807..3102
                     /gene="nuoD"
                     /locus_tag="VF061_07350"
     CDS             1807..3102
                     /gene="nuoD"
                     /locus_tag="VF061_07350"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH dehydrogenase (quinone) subunit D"
                     /protein_id="HEX6669358.1"
                     /translation="MSLRTVEMALATPGLDPDGKPIRVPLGAAPDTVGTYDEDFGAEH
                     MLVNIGPQHPATHGVLRLVIELEGETVKRCIPHLGYLHSGFEKLGEYRHYNQIIPLTD
                     RTDYLSPMANNVALALAVEKLMGIETTERCQVLRVIACEMSRIISHLVWLGTTGIDLG
                     AFTPFLWSFQERERIYNLQEMWTGARLTTSMTRVGGLMADVPDGFQEGLREFTRTFPD
                     TLREVDTMFTRNAIWIGRTQGVGVLTAEEAINYSQSGPMLRASGVDYDVRKDRPYLGY
                     ETYDFDVPVGEHGDIYDRYRVRLEEMWQSNRILEQALDRLAKLEGAPINVDDPRVILP
                     PKSQAMSDMEAMIYHFKQVMEGVKPPAGEAYLGVENPKGELGYYFVSDGSAKPVRWRI
                     RPPAFINLACLPKLCEGSLLADVIAINASVDIVMGEVDR"
BASE COUNT          520 a         1091 c         1029 g          515 t
ORIGIN      
        1 ttggcgggcg tcggcccgcc ggaaggcggc taatataggg gccgccgggg tagctgggca
       61 gccccgggag gggcacgatc cggcggttga atccgcctcc taaccacctt accttgtacg
      121 agatacgtca ccgccacccg ctcggagcat catgctgcag ccgtatctgc cgatcctcct
      181 gctcgtcgcc ttcgtgatcg cgaacgcggt cttgatgctg gcggtttccc acgtgttttc
      241 cacctaccgt cgaaccccca ccaagatcgc gccgtacgag tcggggatgc cggtgctggg
      301 agacgcgcgg gagcggttct cgatcaaatt ctacctggtc gcgatgctct tcatcatctt
      361 cgacatcgag accgtgttca tgattccgtg ggccgtggcc ttccggcagc tgcaggacat
      421 ggccggcctg ctcatcatcg agatgttcgt cttcatcgtg atcctggcgg tggggtacgt
      481 gtacatctgg aagcgtggag cctttcaatg ggactgagca accccgccgg gcagaaccgc
      541 ggggaggaga ccaccacggt gtcggcggtc tcgcccaact gggtcacgac ccggttggat
      601 ttcctcacca actgggctcg ggccaactcc ctctggccga tgccgttcgg cacggcctgc
      661 tgcgccatcg agtacatggc gacggccgcg agccgattcg acatcgcccg cttcgggatg
      721 gagcgacaga gcttttcgcc ccgccaggcg gacgtgctga tctgcgcggg ccggctgccg
      781 ttcaagctgg cgccggtcat ccggcggatc tgggaccaga tgccgcagcc gaagtggagc
      841 atctcgatgg gggcctgcgc ctccaccggc ggaatcttcg acaactactc catggtgcag
      901 ggaatcgaca ccatcatccc ggtggatgtc tacgtccccg gctgcccgcc gcggcccgag
      961 ggactcatgt acggcatcct cctcctccag aagaagatca aaggagagag cttcaccgac
     1021 ccctcactcc gccaggagca gctggtcggt ccttcggggc tcttcctccc cccggagcgc
     1081 gtggacgagc tgtcggagcc cttcggcaac tcggtgcatc agacccgctc ggcatgatgg
     1141 tttcatccag gcgtggcatc ccgagcgcag cgagggatcg cgtgcgccgt gacggcgggg
     1201 gggcgcggtg accgttcccg cgctccgggc cgagttcgat gccgcgatcg agcgccacct
     1261 ggtctcctgc ggcgacacca tcgtctacgt gagccgggac cgcagccatg acgtcctcgc
     1321 ctggctccgg gacgcgcccg cgcagcggtt cgactacctc accgacgtca ccgcggtgga
     1381 ctaccgcgac cccgagcgcc cgctcgaggt ggtctatcag ctccgcgcgc tggcgcgccg
     1441 cgccgacctg cgggtcaagg tcgcgctcga caagcgcgag ccgctcgagg tccgctcggt
     1501 ggtggatctg tggcgcggcg ccgattggct ggagcgcgag gtctacgaca tgttcggcgt
     1561 ggtcttcacc ggccacccgg acctgcgccg tatcctcatg tgggagacct atgccgaggg
     1621 gtatcccctg cggaaggatt tcccgctgcg cgggcacttc agccgggcgg agcagacgag
     1681 acaggccctc gccgccaacc ccgaagccca ctattccctc gaagagctct cgatcgccga
     1741 ggcctacgac gagctgcccg cggaggtgcg ggcgcggctc tcgcgcgggg agcgagggtt
     1801 cctgagatga gtcttcgcac cgtcgagatg gcgctcgcca ccccggggct cgaccccgac
     1861 ggcaagccga tccgcgtccc cctcggcgcc gcccccgaca ccgtcggcac ctacgacgag
     1921 gacttcgggg ccgagcacat gctggtcaac atcggcccgc agcacccggc cacccacggg
     1981 gtgctccggc tggtgatcga gctcgaagga gagaccgtca agcgctgtat cccccacctc
     2041 ggctacctgc actccgggtt cgagaagctg ggcgaatacc gccactacaa ccagatcatc
     2101 cccctcactg accgcaccga ctacctctcc ccgatggcca acaacgtggc cctcgcgctg
     2161 gcggtcgaga agctgatggg gatcgagacg acggagcgct gccaggtgct ccgggtgatc
     2221 gcctgcgaga tgagccgcat catctcccac ctcgtgtggc tgggcaccac cggcatcgac
     2281 ctcggcgcct tcacgccctt cctctggtcg ttccaggagc gggaacggat ctacaacctg
     2341 caggagatgt ggaccggcgc ccggctcacc accagcatga cccgggtggg cgggctcatg
     2401 gcggacgtgc cggacggctt ccaggaggga ctccgcgagt tcacccggac ctttccggat
     2461 acgctgcgcg aggtggacac catgttcacc cgcaacgcca tctggatcgg ccgcacccag
     2521 ggcgtcggcg tgctgacggc ggaagaggcg atcaactatt cccagtccgg tcccatgctg
     2581 cgcgccagcg gggtggacta cgacgtccgc aaggatcgcc cctacctggg ctacgagacc
     2641 tacgacttcg acgtgccggt cggcgagcac ggcgacatct acgaccgcta ccgggtgcgg
     2701 ctcgaggaga tgtggcagtc caaccggatc ctggagcagg ccctcgaccg gctcgccaaa
     2761 ctggaaggcg cccccatcaa cgtggacgat ccccgggtga tcctcccgcc caagtcccag
     2821 gcgatgagcg acatggaagc gatgatctac cacttcaagc aggtgatgga aggggtgaag
     2881 ccgccggcgg gagaggccta cctgggcgtc gagaatccga agggcgagct ggggtactac
     2941 ttcgtctccg acgggtccgc caagccggtg cgctggcgga tccggccccc ggccttcatc
     3001 aacctggcct gcctccccaa gctctgcgaa ggatcgcttc tcgccgacgt gatcgccatc
     3061 aacgccagcg tggatatcgt catgggagag gtggatcgat gagcgccgga gcagcgcacg
     3121 gcagcgggca tgggacggcg cccgccgagc agcac
//
LOCUS       DASUYN010000376         3308 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_559362, whole genome shotgun sequence.
ACCESSION   DASUYN010000376 DASUYN010000000
VERSION     DASUYN010000376.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3308)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3308)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3308
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_559362"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1718
                     /locus_tag="VF061_07355"
     CDS             <1..1718
                     /locus_tag="VF061_07355"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEX6669359.1"
                     /translation="LRELILGAERRRLEELERRLDAAGLTGEELAELLPEAIVLRAGR
                     DRQLARALAPTVENAIGESVRRNPRQIATAIFPVLGPAIRKAIAEALAGLVASINSAV
                     EHSISPRGLRWRLEAWRTGVPYAQVVLKHALVYRVEQVFLIHAETGLLLSHAWAPELP
                     PSDPDLISGMLTAIRDFVADSFARDGDAGGLRRFSVGELTVMVEQGPQAVLAAVVRGQ
                     APDTLLAKLQDTLERVHLEYAEPLAAFDGDTAAFEPARPLLEECLATVVSTARERGGR
                     KRAAWLPWAVGALLVLALLAWLRVRSQQRWDRAVERLESEPGIVLTRAERDGGRWSFA
                     GLRDPLAPEPAALLAAVGADTARVRGSWEPYLSLRPELVLARARQSLTPPATVSFALA
                     GDTLRMRGAAPLQWLAATARTAAIPAGVTALDLSGVEPVVPNELASLVTAIEGRRVLF
                     DIGSAAVRPQGRAAAGEVAAAFGRLRAGAAEIGVHAGLELVGRTDPIGTDSTNQALSR
                     SRAETVLAALVGRGVTREALRLTPAGTTDPLPASDPAERARINRSVSFVVSLAWSATG
                     REPAR"
     gene            1715..2224
                     /locus_tag="VF061_07360"
     CDS             1715..2224
                     /locus_tag="VF061_07360"
                     /inference="COORDINATES: protein motif:HMM:NF012255.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rab family GTPase"
                     /protein_id="HEX6669360.1"
                     /translation="MIQKKVCMVGVFGTGKTSLVQRFVHSMFSDRYLSTVGVKIDRKP
                     VEVDGSSLTLVLWDLAGRDGHEDITASYLRGSHAILYVADGTRRETCDQLPELRELAR
                     EAAGDVPAVLALNKVDLTDRWTLSRGDEEGLASQWDVVRTSAKTGDGVEEVFRRIARG
                     TLAAKEARP"
     gene            2221..3051
                     /locus_tag="VF061_07365"
     CDS             2221..3051
                     /locus_tag="VF061_07365"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase 2C domain-containing
                     protein"
                     /protein_id="HEX6669361.1"
                     /translation="MTAAAETAVRLDVAGLTDVGRRRKANEDHFVVVSLQKTVSIRLT
                     SLADPRVFDRLRGPEGLLMVVADGVGGRPGGAEASETAVTALVEYIAQAAGCFNQLDV
                     DQEHRFLEQLETAVMEAHRRLLATHGERADGPATTLTMAMLIWPRAYIVHVGDSRAFY
                     LRKGRLRQLTRDQTTGEYMVNVGAWTEEQARTAPLGSTLASALGSEELSPAIGLVDLH
                     PGDSLLLCTDGLTRHVTDERITELLATAGSAEAACRALVDAALEGGGSDNVTVVVARA
                     "
     gene            complement(3048..>3308)
                     /locus_tag="VF061_07370"
     CDS             complement(3048..>3308)
                     /locus_tag="VF061_07370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669362.1"
                     /translation="GAVTMVMLAGLWIAVVSWRLRSGAAHALAVLLLVWGMALVAERV
                     LPRIGYAAEQAGWGCAGETEVPALPYGLAWLRGRAPVTAADG"
BASE COUNT          445 a         1193 c         1242 g          428 t
ORIGIN      
        1 agctgcgcga gctgatcctc ggtgccgagc ggcgccggct ggaggagctg gagcggcggc
       61 tcgacgcggc gggcctcacc ggtgaggagc tggccgagct gctgccggag gccatcgtcc
      121 tccgcgcggg gcgcgatcgc cagctcgccc gcgccctcgc cccgacggtc gagaacgcca
      181 tcggcgagtc ggtgcgccgg aacccccggc agatcgctac cgccatcttc cccgtgctcg
      241 gccccgccat ccgcaaggcg atcgccgagg cgctggccgg gctcgtcgcc tccatcaaca
      301 gcgccgtcga gcacagcatc tcgccccgcg ggctgcggtg gcggctcgag gcctggcgca
      361 ccggcgtccc ctacgcccag gtcgtgctca agcacgcgct ggtctaccgc gtggagcagg
      421 tcttcctcat ccacgcggaa accggcctgc tgctgtcgca cgcctgggcc ccggagctcc
      481 cccccagcga tcccgacctc atctcgggga tgctcaccgc catccgcgac ttcgtggccg
      541 actccttcgc gcgggacggg gacgccggcg gtctgcggcg attcagcgtc ggcgagctga
      601 cggtcatggt ggaacagggc ccgcaggcgg tcctcgccgc ggtggtccgg ggccaggcgc
      661 cggacaccct gctcgccaag ctccaggaca cgctcgagcg cgtccacctg gagtacgccg
      721 agccgctcgc cgcgttcgac ggggataccg cggcattcga gcccgcccgg ccgctgctgg
      781 aggagtgcct cgccacggtg gtctccaccg cccgggagcg gggcggccgg aagcgcgcgg
      841 cgtggctgcc ctgggccgtg ggcgcgctcc tggtcctggc cctgctcgcc tggctccggg
      901 tgcggtcgca gcagcggtgg gaccgtgccg tggagcggct ggagtcggag ccgggcatcg
      961 tgctgacgcg ggcggagcgg gacggcggtc ggtggagctt cgccgggctg cgggacccgc
     1021 tggccccgga gcccgccgcg ctcctcgcgg cggtgggagc ggataccgcc agggtccggg
     1081 ggagctggga gccgtatctt tcgctccggc cggagctggt gctggcgcgg gcgcgacaga
     1141 gtctcacccc gccggccacg gtcagcttcg ccctggcggg ggacacgctc cgaatgcgag
     1201 gcgcggcgcc gctccagtgg ctggcggcga cggcccggac cgcggccatc ccggcgggcg
     1261 tgaccgcgct cgacctgagc ggcgtcgagc cggtcgtgcc caacgagctg gcctccctgg
     1321 tgacggcgat cgaagggcgg cgggtgctgt tcgacatcgg ctccgccgcc gtgaggccgc
     1381 aggggcgagc cgctgcgggg gaagtggcag ccgcgttcgg gcggctccgc gccggcgcgg
     1441 cggagatcgg cgtgcacgcc gggctcgagc tggtcggccg caccgacccc atcggcaccg
     1501 actcgaccaa tcaggccctg agccggagtc gcgccgagac ggtgctcgcc gcgctcgtgg
     1561 gacgaggggt gacgcgggag gccctgcgcc tgaccccggc cggaactacc gacccgctgc
     1621 ccgcgtccga tccggccgag cgggcccgca tcaatcgcag tgtatccttc gtggtgagcc
     1681 tggcctggag cgccaccgga cgggagcccg cgcgatgatc cagaagaagg tctgcatggt
     1741 gggggtgttc ggaaccggga agaccagcct ggtccagcgg ttcgtgcact cgatgttctc
     1801 ggatcgctac ctctccaccg tgggcgtgaa gatcgaccgg aagccggtgg aggtggatgg
     1861 ctcgagcctc accctggtgc tctgggacct ggcgggccgg gacggccacg aggacatcac
     1921 cgccagctac ctgcgcggct cccacgcgat cctgtacgtg gccgacggca cccggcggga
     1981 gacctgcgat cagctccccg agctgcggga gctggctcgg gaggccgccg gcgacgtccc
     2041 cgccgtgctc gcgctcaaca aggtggacct cacggaccgc tggaccctgt cccgcggaga
     2101 cgaggagggg ctcgcgagcc agtgggacgt cgtgcgcacc agcgccaaga ccggcgacgg
     2161 tgtggaggag gtgttccgcc ggatcgcccg aggaacgctc gcagcgaagg aggctcggcc
     2221 atgacggcgg cggcagagac ggcggtccgg ctggacgtag ccggtctcac ggacgtgggt
     2281 cgcaggcgca aggccaacga ggaccatttc gtcgtcgtct cgctccagaa gacggtgagc
     2341 atccggctga ccagcctcgc ggacccccgg gtgttcgacc ggctgcgggg gcccgaagga
     2401 ctgctcatgg tggtcgcgga cggcgtcggc ggccggcccg gtggagcgga ggcgagcgag
     2461 acggcggtca ctgccctggt cgagtacatc gcccaggcgg ccgggtgctt caaccagctc
     2521 gacgtggacc aggagcaccg gtttctggag cagctcgaga ccgccgtgat ggaggcgcat
     2581 cggcgcctcc tcgcgaccca cggggagcgg gccgatggcc ccgcgaccac gctcaccatg
     2641 gccatgctga tctggccgcg ggcgtacatc gtgcacgtgg gtgacagccg tgcgttctat
     2701 ctccggaagg gacggctccg ccagctcacc cgcgaccaga cgaccggcga atacatggtg
     2761 aacgtcggcg cgtggaccga ggagcaggcc cggacggctc cgctcggctc caccctggcg
     2821 agcgcgctgg gatcggagga gctgtcgccg gccatcgggc tggtggatct ccaccccggc
     2881 gactccctgc tgctctgcac cgacggactc acgcggcacg tgacggacga gcgaatcacc
     2941 gagctgctcg ccaccgcggg cagcgccgag gcggcgtgcc gggccctggt ggatgcggcg
     3001 ctggaaggtg gggggagcga caacgtgacg gtggtagtgg cgcgggccta gccgtccgcc
     3061 gccgtcaccg gcgctcgccc ccgaagccac gcgaggccgt atgggagtgc cggcacctcg
     3121 gtttccccgg cgcaccccca gcccgcctgc tccgccgcgt atccgatcct gggcaggacc
     3181 cgctcggcca cgagcgccat tccccagacc agcaacagca ccgcgagggc gtgggcggca
     3241 ccgctgcgga gcctccacga caccaccgcg atccagagcc cggccagcat caccatcgtc
     3301 accgcgcc
//
LOCUS       DASUYN010000377        11466 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_778853, whole genome shotgun sequence.
ACCESSION   DASUYN010000377 DASUYN010000000
VERSION     DASUYN010000377.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 11466)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11466)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11466
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_778853"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            187..588
                     /locus_tag="VF061_07375"
     CDS             187..588
                     /locus_tag="VF061_07375"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEX6669363.1"
                     /translation="MQVAELMQRNVRTIASEACVAEVVLSLADAHVSGLPVVDKNGRM
                     IGVVSATDVLTAEAEAESQRVGRELLEETSVRDIMTARPYTVAPDEDVREAARQMLYA
                     DVHRLFVAEGDRLVGVISTTDIVRAVATGKL"
     gene            593..2527
                     /locus_tag="VF061_07380"
     CDS             593..2527
                     /locus_tag="VF061_07380"
                     /inference="COORDINATES: protein motif:HMM:NF012503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-dependent decarboxylase"
                     /protein_id="HEX6669364.1"
                     /translation="MEDSTTARADALRAWFLGPRAENAALLERLVVESLRDHVFWRRN
                     YHPEDGFTIREADKRREGYEDAVAALTQELLGLLAELKRDVPVFSGRYKGHMIAEQTI
                     AAQVGWFATMLYNPNNIAMDISPVTTRLEMEVAAQLARMIGYDPRTSWGHLTSGGTIA
                     NFEAFWLARGVRYLPVAAAGAATELGLELPVTTADGTRANLSGLALWQLLNIPNRATL
                     DLWDALWAAAPRADVTRALGNHSLATIGYQEYSRRLAFEYGDPLPPGVVLVSATAHYS
                     WEKIVRALGIGSNQLVHVPVDTRFRMDPDALWERVRALASRRQVIVACVSVCGSTEES
                     AVDRLDRVLEVRERAERELGVTFHLHSDACYGGYTAAVTRAADGGRRGAAAIRASVGE
                     DWPDDQWVRAVEVLAEADSVSVDPHKLGYIPYSAGAVLVRDGRARHLVATDPPYLAPA
                     GGEEPGVERFLGRYILEGSKPGAAAAAVWLSHKALPLDERGYGYLIERTAAGARRLHR
                     ALAGADLSPFRVVLLPEPDINIVCYLLTHASLDSLPAVNALNERIYARMSLSRREDDP
                     EYIITRTRLRSPMYDGAVDPLLAALGVCTPEAWKASGDEGLVVLRSTVMDPFLAAAPP
                     APDHLGGFVAALRRAAAASL"
     gene            complement(2473..5133)
                     /locus_tag="VF061_07385"
     CDS             complement(2473..5133)
                     /locus_tag="VF061_07385"
                     /EC_number="7.2.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015662 - P-type ion transporter activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0019829 - ATPase-coupled monoatomic cation
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0043169 - cation binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation-translocating P-type ATPase"
                     /protein_id="HEX6669365.1"
                     /translation="MPPTAPPAALTPWHQLAPSEALARLGVGPEGLTEAEAAVRLKRF
                     GSNRFRRPPPASPWRILLGQVRSLIVLLLLAAGIVALAAGDPLDAAAIGAVLVLNIAL
                     GFVLELRAHRAMEALLALEVARASVVRDGGIRDLDARLVVPGDVIELEAGAAVPADAR
                     LLEASELRTVEAALTGESLPVSKRSEASLEADTPLAERSTMVYKTTAVAAGRGRAVVV
                     GTGMDTEVGRIGALTASVVEEPTPLEERLDALGRRLAGVAIVVAVVVAALGVLQGASL
                     SQLLQTAIALAVAAVPEGLPVVGTIAMAVGVRRMARRRALIRHLPVVETLGSATVICT
                     DKTGTLTAGEMTVTELRLPDRKVSVPAGEFTATRDVLRLLRAAALANRGTLTEVEDAW
                     ETRGDPTETALLVAARKGGLDVATLRAEWPEVAELPFSSERMFMATWHRAESGFLLCV
                     KGAPHRVLELCADRWGADGPRPLDAETRERLLLANRELAGRGLRVLAVATAKVAEVAQ
                     PPAGLTWLGIAGMMDPPAPGVVETIRAFRQAGIRTLMLTGDQRLTARSVAERLDLLDA
                     GGVVRDGREVDRLTDDELRQEVGSTSIFSRVSPEAKLRIVGACQARGDVVAMLGDGVN
                     DAAALRKADIGVAMGRRGTDLAKEAADVILADDRFTTIAAAVEQGRIIFDNIRKFVFY
                     LFSCNLAEILVFLGVGLAGQTAPLLPLQILWLNLVTDTFPALALAVEPGDPSVMRQPP
                     RDPREAILSGRMLRAVAIYGALIAAVTIVAFAVGGTTSAFMTLALAQILHLGNARSSG
                     PVLAPGPAFANPAAVGAALLAIGLQLLTVFYEPLARVLQVTPLSGREWLLVAGLGAVP
                     AVLGQAAKLLRSTQSEAAAARRNAATNPPR"
     gene            5263..5403
                     /locus_tag="VF061_07390"
     CDS             5263..5403
                     /locus_tag="VF061_07390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669366.1"
                     /translation="MSDMPPGLPKHPIGTFAFVGAYAVLFLIAWFAIYIYIFLARQPV
                     TP"
     gene            5400..5912
                     /locus_tag="VF061_07395"
     CDS             5400..5912
                     /locus_tag="VF061_07395"
                     /inference="COORDINATES: protein motif:HMM:NF012344.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669367.1"
                     /translation="MKVDLYERIWMWGVGVMLAVFFASTAAAALMSQIHPPSHVETID
                     PRTVLSDPRFKRQGVRVDADGRVHATVVGLMFTWLPAELILPADTPVTFHLTSPDVIH
                     GFQIVRTNGQVMVVPGYVSQFTTQFAAGDYLVACNEYCGVGHHTMATRLKVVPRSQWQ
                     APSAEVAHVQ"
     gene            5902..7593
                     /locus_tag="VF061_07400"
     CDS             5902..7593
                     /locus_tag="VF061_07400"
                     /inference="COORDINATES: protein motif:HMM:NF012343.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HEX6669368.1"
                     /translation="MSSDVVRTRLSAETPSRDVPRDEAAGNRLIRANIWVAVTAFGVA
                     AAMAMMQAISRANLELPYRSASMYYMSVTAHGILMALVFTTFFIMGLGWAVAQKEIGA
                     VPWRRAGWIAFWVAAAGVVMAIATVFAFKSSVLYTFYPPLQAHPLFYIGLTLLVVGSW
                     VWAGAMIAAWRRSRAARGGRPASLAMHATAANAMLWLLATLGVAAEMLFQLIPWSLGL
                     VERVDPLLARTLFWFFGHPLVYFWILPAYTIWYTVLPREAGGKLFSEPLGRMVFTLFL
                     IFSTPVGFHHQFQDPGITAGWKLLHTFNTMIISFPSLVTAFTIVASLEVAGRLRGGTG
                     LFGWIRTLPWGNPMVSSVLLACLLFMVGGFGGAINAAYALNAVVHNTAWIAAHFHLTV
                     GSAAALTFMGACYWLVPKVSGRELELSLLAKVQPYLWFLGMVLFSFTGHVAGLLGLPR
                     RVFATSYNDAAQARAWEWLTSVSAIGGIVLFASAGFFVLVMVATLLAGPRREQTGIQW
                     AESLGMPEEGYGPTVWDRLGLWFGVAVVLVVIAYAIPLYDLLHLTRYGSQGFKPF"
     gene            7733..10366
                     /locus_tag="VF061_07405"
     CDS             7733..10366
                     /locus_tag="VF061_07405"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX6669369.1"
                     /translation="MRRISFAALPSRLPFSLVFLLFVGPAVALAQETGTITGTVTRAA
                     DAGALSSVSVSVPATGISTITGTDGRYTLRRVPVGPQTVVIRWLGYAPTEVQVVVEAD
                     RTVTADAALEAVVVSLGEIVVEGASRGPERIVEAPAAISVVPQEVLQSVAVTGQAPLA
                     LQSVPGVDIVQSGVNDFNVNARGFNSTLNRRVLTLQDGRDLAIAFLGSQEWNGLATPL
                     DDLGRVEMVRGPGSALYGANAFSGVINITTPEAREVLGSKLTLAGGELETFRVDGRHA
                     GLLADGRLGFRLNGGYNRSDTYSRSRTLRNGTSLQEEYEESTDEPVPLTVEALPLNGQ
                     TADPVTGEVSGDRDALRNIYGSGRLDYYLDNGSVLTVDGGAARVENEIFVTGIGRVQV
                     DEAIKPYARAALAADRYNIFGYWNSRTSLEPQFSLTSGLPLEERSDIFHVEGQNNWDF
                     NQERGRVVYGASYRNTRVNTSGTLMNLANDDRSDGLYSAYGQVEYRVTPQVRLVGAAR
                     FDDGDLIEGQFSPKGAVVVSPNENHSFRFSVNRAFQTPNYSEFFLQVPVAAPTPLPRT
                     LEGSIETYYAAVRQNIPPPAIADLTITDDLPWEFSGLTPALALGNADLDVETVTGWEV
                     GYKGTIGERVYVTADAYINRLRNFVTDLLPGVNPTYPSYGLTEEVNVPAELAALDARL
                     TLLGLPADHPLRAPIPQLIGGHALLEQGLRIQGGNALATLPGGSRAIVLSYTNAGKVI
                     ERGIELGIGYQFTPEIRGDATFTGFSFDVDEEEQAVGDQLLPNTPSKKATFSMSYAGQ
                     QGFDGNVTLRLTDGHEWATGVFQGYVPSSELLNVSAGYRINNYVRIHATATNLFDQQR
                     FQLYGGSVIGRRVLGGVTATF"
     gene            complement(10441..>11466)
                     /locus_tag="VF061_07410"
     CDS             complement(10441..>11466)
                     /locus_tag="VF061_07410"
                     /inference="COORDINATES: protein motif:HMM:NF038114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain repeat protein"
                     /protein_id="HEX6669370.1"
                     /translation="AGNSNFEPSDGDVSQVVNKAETSTAVSSNANPSVFSQAVTLTVT
                     VTPVTPAVAVPQGAVTLKDGSCAAGTTLGGPTALSGSGTASFNVSALAVGAHNVTGCY
                     AGNASFEESDGFVSQQVNQASTTTAITSSVNPSILAQPVTFDVTVSPVAPAVATPQGD
                     VTLKDGSCAAGTTIGGPTALSGSGQVSFNVSTLAVGLHTVTACYAGNTNFEGSYSSLA
                     QQVKYNFDGLFAPVDRPNAMNVSKAGQGIPLKWRLTDFYGAPVLNFAPTALGVAVSGL
                     QCTVSTDLDQIEEYAGNSGLQNLGDGYYQFNWKTPANYANTCKSIGLNLGEGTPRGPL
                     AFFNFKK"
BASE COUNT         1664 a         4035 c         3993 g         1774 t
ORIGIN      
        1 taggcgcgtc atacgtcacc ccttcctcag gttcgctgca tgccgtcgca tccgacggca
       61 ccgcatccta tcgcgcgggg gcggaatgag ggctgaaggc ccggtgaaag tcccttcatg
      121 cacccttcac cgccgattca ccggggccgc gccaccttgc gttcgtatct caccgccgag
      181 gatgccatgc aggtcgccga actcatgcag cggaacgtca gaaccatcgc cagcgaggcc
      241 tgcgtggccg aggtcgtgct gtcgctcgcc gacgcgcacg tctccggcct gccggtcgtg
      301 gacaagaacg gccggatgat cggtgtggtc tcagccaccg acgtcctgac cgccgaagcc
      361 gaggccgaga gtcagcgcgt cggacgcgag ctgctggagg agacgtcggt ccgggacatc
      421 atgaccgcgc gcccctacac cgtcgcgccg gacgaggacg tccgggaggc ggcgcggcag
      481 atgctgtacg ccgacgtgca ccgcctgttc gtggccgagg gggaccgcct ggtgggcgtc
      541 atctcgacca ccgacatcgt gcgcgcggtc gcgaccggca agctctgagg ggatggagga
      601 ctccaccacc gctcgagccg atgcgctccg ggcctggttc ctgggcccgc gggcggagaa
      661 cgcggcgttg ctcgagcggc tggtggtgga gtcgctgcgc gatcacgtct tctggcggcg
      721 gaactaccac cccgaggacg gcttcaccat ccgcgaggcg gacaagcggc gggagggata
      781 cgaggacgcg gtcgccgcgc tgacccagga gctgctcggg ctcctggccg agctgaagcg
      841 cgacgtgccg gtgttcagcg gccgctacaa gggccacatg atcgcggagc agaccatcgc
      901 ggcccaggtg ggctggttcg ccaccatgct gtacaacccc aacaacatcg cgatggacat
      961 ctccccggtg acgacccggc tggagatgga ggtggcggcc cagctcgccc ggatgatcgg
     1021 ctacgatccc cggacgagct ggggccacct gacctcgggc gggaccatcg cgaacttcga
     1081 ggccttctgg ctggcgcgtg gcgtgcgcta cctgccggtg gccgccgcgg gcgccgccac
     1141 cgagctgggg ctcgagctcc cggtgaccac ggccgacggc acccgcgcca acctctcggg
     1201 gctggcgctc tggcagctgc tcaatatccc caaccgcgcg acgctcgacc tgtgggacgc
     1261 cctctgggcg gcggcgcccc gggcggacgt gacccgcgcg ctcggcaacc actcgctcgc
     1321 cacgatcggc taccaggagt actcccgccg gctcgccttc gagtacggcg acccgctgcc
     1381 gcccggcgtg gtgctggtct ccgcgaccgc gcattactcg tgggagaaga tcgtccgcgc
     1441 cctcggcatc gggtccaacc agctggtcca cgtgccggtg gacacccgct ttcggatgga
     1501 cccggatgcg ctgtgggagc gggtccgcgc gctggcgtca cgccgccagg tgatcgtggc
     1561 ctgcgtgagc gtgtgcggga gcaccgagga gagcgcggtg gaccggctgg accgcgtgct
     1621 cgaggtgagg gagcgggccg aacgggagct gggcgtgacg ttccacctcc attcggacgc
     1681 ctgttacggc gggtacaccg ccgccgtgac ccgcgcggcc gacgggggac ggcgcggcgc
     1741 cgcggccatc cgcgcgagcg tcggcgagga ctggcccgac gaccagtggg tccgcgccgt
     1801 ggaggtcctg gccgaggccg actccgtgag cgtggacccg cacaagctcg gctacatccc
     1861 ctactcggcg ggcgcggtgc tggtccggga cgggcgggcg cgccacctcg tcgccaccga
     1921 cccgccatac ctggcgcccg cgggtggcga agagccgggg gtcgagcggt tcctgggacg
     1981 ctatatcctg gaaggctcga agccgggcgc cgcggccgcc gccgtctggc tgagtcacaa
     2041 ggcgctgccg ctcgacgagc gggggtacgg ctacctgatc gagcgcaccg cggccggggc
     2101 gcggcgcctg caccgggccc tggccggcgc ggacctctcg cccttccggg tggtgctgct
     2161 gccggagccc gacatcaaca tcgtctgcta cctgctcacc catgcgtcgc tggactccct
     2221 tccggcggtc aacgcgctca acgagcggat ctacgcccgg atgagcctga gccgccggga
     2281 ggacgacccg gagtacatca tcacccggac ccggctccgc tcaccgatgt atgacggtgc
     2341 ggtggatccg ctgctggcgg ctctgggtgt ctgcactccg gaggcgtgga aggcgagtgg
     2401 ggacgagggg ctggtggtgc tgcgctccac ggtgatggat cccttccttg ccgccgcccc
     2461 gccggcgccc gatcatctgg gcgggttcgt cgccgcgttg cggcgggcgg cggcggcctc
     2521 gctctgagtg gagcggagga gcttggccgc ctggcccagc acggcaggca cggcgccgag
     2581 tcctgcgacg agcagccact cccgcccgct cagaggcgtc acctggagca cgcgggcgag
     2641 cggctcatag aacacggtga gcagctggag cccgatcgcg agcagggccg cgcccacggc
     2701 ggccgggttg gcgaaggcgg gcccgggagc gagcacgggc ccgctgctgc gcgcgttgcc
     2761 caggtgcagg atctgggcaa gggccagggt catgaaggcg gaggtcgttc cgccgacggc
     2821 gaacgcgacg atcgtcacgg cggcgatcag ggctccgtag atcgccacgg cgcgcaacat
     2881 gcggccggag agaatggcct cgcggggatc gcggggcggc tggcgcatga ccgacggatc
     2941 gcccggctcg accgcgaggg cgagcgcggg gaaggtgtcg gtcaccaggt tgagccagag
     3001 gatctgcagt ggcaggaggg gtgccgtctg cccggccagg ccaacgccga ggaagaccag
     3061 gatctccgcc agattgcagc tgaagagata gaagacgaac ttccggatgt tgtcgaagat
     3121 gatccggccc tgctccaccg cggcagcgat ggtggtgaac ctgtcgtcgg ccaggatgac
     3181 gtccgccgcc tccttcgcca gatcggtccc ccgccggccc atggccacgc cgatgtccgc
     3241 cttgcggagc gccgccgcgt cgttcacgcc gtcgcccagc atcgcgacca cgtccccccg
     3301 cgcctggcac gcgcctacga tccgcagctt cgcctccggg ctcacccggc tgaagatcga
     3361 ggtgctcccc acttcctgcc gcagctcgtc gtcggtcagg cggtccacct cccggccgtc
     3421 gcgcacgacg ccgcccgcgt cgaggaggtc cagtcgttcc gcgacgctcc gcgccgtgag
     3481 ccgctgatcc ccggtgagca tgagcgtccg gatgccggcc tgccggaacg cccggatcgt
     3541 ctcgaccacg cccggggcgg ggggatccat catccctgcg atgccgagcc aggtgagccc
     3601 tgccggaggt tgggccacct ccgccacctt ggcggtggcg accgccagga cgcggagccc
     3661 ccgaccggcc agctcccggt tggccagcag gagacgttcc cgggtttcgg catccagcgg
     3721 gcgtggcccg tcggcgcccc agcggtccgc gcacagctcg agcacgcggt gcggcgcgcc
     3781 cttcacgcag agcaggaacc cggactccgc ccggtgccag gtcgccatga acatccgctc
     3841 gctcgagaac ggcagctcgg ccacctcggg ccactcggcc cgcagggtgg cgacgtcgag
     3901 cccgcccttc cgggcggcga ccaggagcgc ggtctcggtc ggatcccccc gagtctccca
     3961 ggcgtcctcg acctccgtca gggtcccgcg gttggcgagc gcggcggcgc ggagcaggcg
     4021 cagcacgtcc ctcgtggcgg tgaactctcc ggcggggaca ctcaccttcc ggtcgggcag
     4081 ccgaagctcg gtcaccgtca tttcgcccgc ggtcagggtg ccggtcttgt cggtgcagat
     4141 gaccgtggcg gagcccagcg tctcgaccac cggcaggtgg cggatcaggg cccgtcgccg
     4201 cgccatgcgc cgcaccccca cggccatggc gatcgtgccc accaccggga ggccctcggg
     4261 cacggcggcg accgcgagtg cgatggccgt ctgcaggagc tggctcagcg aggcgccctg
     4321 caacacgccc agcgccgcca ccacgaccgc gaccacgatc gcgacgccgg ccagccggcg
     4381 ccccagcgcg tccagccgct cctccagggg cgtgggctcc tccacgaccg aggcggtgag
     4441 tgcgccgatc cgaccgacct cggtgtccat gccggtgccc acgacgacgg cccggccccg
     4501 gcccgccgcg acggccgtgg tcttgtagac catcgtgctc cgctcggcca gcggcgtatc
     4561 cgcctcgagg gaggcctcgc tccgcttgct caccggcagc gactcgccgg tgagggccgc
     4621 ctcgacggtg cggagctccg aggcctccag cagcctcgcg tctgccggaa ccgccgcgcc
     4681 ggcctccagc tcgatgacgt caccgggcac cacgagccgc gcgtccagat cgcggatgcc
     4741 gccgtcgcgc accacgctcg cgcgggcgac ctcgagtgcg agcagcgcct ccatcgcccg
     4801 gtgcgcgcgc agctcgagga cgaaaccgag cgcgatgttc agcaccagca ccgcgccgat
     4861 ggcggccgcg tccaggggat cgccggccgc aagagcgacg atgccggcgg ccaggaggag
     4921 aagcacgatc agactgcgga cctgcccgag caggatccgc cagggcgagg ccgggggcgg
     4981 ccgccggaac cggttggagc cgaagcgctt cagccggacg gcggcctccg cctccgtcag
     5041 tccctcgggc ccgacaccga gacgcgccag cgcctccgag ggtgccaact ggtgccaggg
     5101 cgtgagggct gcgggtggcg ccgtgggcgg catgtcgctc tcctcggagc tcgggtctcg
     5161 ccagtgtagc ccgggaagcg tgaagaacgc ttcaaccttc cttcatggag ctctcaacgg
     5221 gcgagcccca ccttgtggcc acttctcacg ccaggagccg cagtgtccga catgccaccc
     5281 ggcctgccga agcacccgat cggcacgttc gccttcgtgg gcgcctacgc ggttctcttc
     5341 ctgatcgcgt ggttcgcgat ctacatctac atcttcctcg cccgccagcc ggtgacccca
     5401 tgaaggtcga cctgtacgag cggatctgga tgtggggcgt gggcgtcatg ctcgcggtgt
     5461 tcttcgcgag cacggcggcc gccgcgctga tgagccagat ccaccctccc agccacgtcg
     5521 agaccatcga tccccgcacg gttctgtccg acccgcgctt caagcgccag ggcgtgcggg
     5581 tggacgccga cggacgggtc cacgccacgg tcgtcggtct catgttcacc tggcttccgg
     5641 ccgagctgat cctgccggcc gatactccgg tgaccttcca tctcacctcg ccggacgtga
     5701 ttcacggctt ccagatcgtg cgtaccaacg gccaggtcat ggtggtgccg ggatacgtga
     5761 gccagttcac cacccagttc gccgcgggcg actatctggt cgcctgcaac gagtactgcg
     5821 gcgtgggcca tcacaccatg gcgacacgcc tcaaagtggt gccccgaagc cagtggcagg
     5881 cacccagcgc cgaggtagcc catgtccagt gatgtggtca ggacccgcct ctcggccgag
     5941 acgccctcgc gggacgtgcc ccgggacgag gccgcgggca accggctcat tcgggccaat
     6001 atctgggtgg ccgtcacggc cttcggcgtc gccgccgcga tggcgatgat gcaggcgatc
     6061 agccgcgcca acctggagct gccctatcgg tccgccagta tgtactacat gtcggtcacc
     6121 gcgcacggca ttctgatggc gctggtgttc accaccttct tcatcatggg actgggctgg
     6181 gcggtggcgc agaaggagat cggcgcggtg ccgtggcggc gtgccggatg gatcgccttc
     6241 tgggtggcag cggccggggt ggtgatggcg atcgccacgg tcttcgcctt caagtccagc
     6301 gtgctctaca ccttctaccc gccgctccag gcgcacccgc tgttctacat cggtctcacc
     6361 ctgctggtgg tcgggtcctg ggtctgggcc ggcgcgatga tcgccgcgtg gcggcgctcg
     6421 cgggccgcgc gggggggccg tcccgcgtcc ctggcgatgc acgccaccgc ggccaacgcc
     6481 atgctctggc tcctggccac cctgggcgtg gccgccgaga tgctgttcca gctgatcccc
     6541 tggtccctgg gactggtgga gcgggtcgat ccgctgctgg ctcgcacgct gttctggttc
     6601 ttcggccatc ccctggtcta cttctggatc ctgccggcct acaccatctg gtacaccgtg
     6661 ctcccgcggg aggcgggcgg caagctgttc tcggagccgc tggggcggat ggtcttcacc
     6721 ctgttcctca tattctcgac gccggtggga ttccaccacc agttccagga tccggggatt
     6781 accgcggggt ggaagctgct ccacaccttc aacacgatga tcatctcgtt ccccagcctg
     6841 gtcaccgcgt tcaccatcgt cgcgtcgctc gaggtcgccg gccggctgcg cggcggcacc
     6901 ggtctcttcg ggtggatccg gacgctgccc tggggcaacc ccatggtgtc ttccgtcctc
     6961 ctggcctgcc tgctgttcat ggtcggcgga ttcggggggg cgatcaacgc agcctacgcg
     7021 ctgaacgcgg tggtgcacaa taccgcctgg atcgccgcgc actttcatct caccgtaggc
     7081 agcgctgccg cgttgacgtt catgggcgcg tgctactggc tggtgccgaa ggtgagcggg
     7141 cgcgagctgg aattgtcgct gctggcgaag gtgcagccgt acctctggtt cctgggcatg
     7201 gtgctgttct cgttcaccgg gcatgtggcc ggcctgctcg ggctgccgcg ccgggtcttc
     7261 gcgacctcct acaacgatgc ggcccaggcc cgcgcctggg agtggctcac gtcggtgtcc
     7321 gccatcgggg ggatcgtgct cttcgccagc gccgggttct tcgtgctggt gatggtggca
     7381 acgctgctgg cgggaccccg gcgcgagcag accggcattc agtgggccga atcgctcggc
     7441 atgcccgagg aggggtatgg cccgaccgta tgggaccggc tgggcctgtg gttcggtgtg
     7501 gccgtggtgc tcgtggtgat cgcctacgcc attccgctct acgacttgct gcatctcacc
     7561 cgctacggga gccaggggtt caagcccttc tgagacaggc ggggttccgc ggcttggccg
     7621 cgttacaatt ctgtgatact cttccacctc ccccggacga agtcgtggcc cgaactcgcc
     7681 ggtgcgcccc tcggcggcac cggctcctgt cccccagcat aggatgccag gtatgcgacg
     7741 aatctcgttc gcagcgctcc ccagccgctt gccattctcc ctcgtctttc tgctgtttgt
     7801 cggtcccgcc gttgccctgg cgcaggaaac cgggaccatt accggtaccg tgacccgtgc
     7861 cgcggacgcc ggggcgctga gcagcgtgtc ggtgtcggtc cccgcgaccg gtatcagcac
     7921 catcaccggc accgacgggc ggtatacgct gcgccgggtc ccggtcgggc cccagacggt
     7981 cgtcatccgc tggctgggtt acgccccgac cgaggtccag gtggtggtgg aggccgaccg
     8041 cacggtcacc gccgacgcgg cgctcgaggc ggtggtcgtc tcgctgggcg agatcgtggt
     8101 ggaaggcgcc tcccggggcc cggagcgaat cgtggaggcc ccggcggcga tctcggtggt
     8161 gccgcaggag gtgctccaga gcgtggcggt gaccggccag gcgccgctgg cgctgcagag
     8221 cgtgccgggc gtggacatcg ttcagagcgg cgtcaacgac ttcaacgtca acgcccgcgg
     8281 gttcaactcg accctcaacc ggcgggtgct cacgctgcag gacggccggg acctcgcgat
     8341 cgccttcctg gggtcgcagg agtggaacgg cctggccacc ccgctggacg atctgggccg
     8401 ggtcgagatg gtgcgcggcc cgggctccgc gctctacggc gccaacgcgt tcagcggcgt
     8461 catcaacatc accacgcccg aggcccgcga ggtgctgggc agcaagctca cgctcgcggg
     8521 aggcgagctc gagaccttcc gggtggatgg ccggcacgcc gggctgctgg ccgacggccg
     8581 gctcggcttc cggctcaacg ggggctacaa ccggagcgac acctactccc gctcccggac
     8641 ccttcgcaac ggcacctcgc tccaggagga gtacgaggag tccaccgacg agccggtgcc
     8701 cctcacggtg gaggcgctcc cgctcaacgg ccagaccgcc gacccggtga ccggcgaggt
     8761 gagcggcgac cgcgacgcgc tgcggaacat ctacggcagc ggccggctgg actactacct
     8821 cgacaacggc tcggtgctca cggtggacgg cggggccgcc agagtggaga acgagatctt
     8881 cgtgaccggc atcggccggg tgcaggtgga cgaggcgatc aagccctacg cccgggcggc
     8941 gctcgccgcc gaccgctaca acatcttcgg ctactggaac agccggacct cgctggagcc
     9001 gcagttctcc ctcacctccg gcctgccgct ggaggagcgg tccgacatct tccacgtcga
     9061 ggggcagaac aactgggact tcaaccagga gcggggccgc gtggtgtacg gggcctcgta
     9121 ccggaacacc agggtcaaca cctccggcac cctgatgaac ctggccaacg acgaccggag
     9181 tgacggcctc tacagcgcct acggccaggt ggagtaccgg gtcacgccgc aggtgcggct
     9241 ggtgggcgcg gcgcggttcg acgacggcga cctgatcgag ggacagttct cgcccaaggg
     9301 cgcggtcgtc gtcagcccca acgagaacca ctccttccgc ttctcggtga accgcgcgtt
     9361 ccagaccccg aactactccg agttcttcct ccaggtgccc gtcgccgcgc cgaccccgct
     9421 gccgcgcacg ctggaaggct ccatcgagac gtactatgcc gcggtccggc agaacatccc
     9481 gcccccggcc atcgccgacc tcaccatcac cgacgacctc ccctgggagt tctccggcct
     9541 caccccggcc ctggcgctgg ggaatgccga cctcgacgtg gagacggtca cggggtggga
     9601 ggtcgggtac aagggaacca tcggtgagcg ggtctacgtc accgcggatg cgtacatcaa
     9661 ccggctccgg aacttcgtca ccgacctgct cccgggcgtg aacccgacgt atccctccta
     9721 cgggctcacc gaggaggtga acgtgccggc ggagctggcc gcgctcgacg cgcgcctcac
     9781 cttgctcggt ctcccggccg accacccgct ccgggcgccg atcccgcagc tcatcggcgg
     9841 gcacgcgctg ctggagcagg gcctccgcat ccaaggcggg aacgcgctgg ccaccctgcc
     9901 cggcggcagc cgggcgatcg tgctctcgta caccaacgcg ggcaaggtga tcgagcgcgg
     9961 gatcgagctg ggcatcggct accagttcac gcccgagatc cggggcgacg cgaccttcac
    10021 cggcttcagc ttcgacgtgg acgaggagga gcaggcggtg ggggaccagc tgctgccgaa
    10081 cactccgagc aagaaggcga ccttctcgat gagctacgcc ggacagcagg gcttcgacgg
    10141 caacgtcacc ctgcgcctga cggacgggca cgagtgggcg accggcgtct tccagggcta
    10201 cgtgccgtcg agcgagctgc tcaacgtgag cgcggggtac cggatcaaca actacgtccg
    10261 gatccacgcg accgcgacga acctgttcga tcagcagcgc ttccagctgt acggggggtc
    10321 ggtgatcggg cggcgggtgc tgggcggggt gacggcgacg ttctgaagtg cggctccgcg
    10381 tgaggccgaa cgaacgaagg cccggctccc gccgggcctt cgttctggaa gggggtgaag
    10441 ctacttcttg aaattgaaga atgccagcgg accgcgaggg gttccctctc ccaggttgag
    10501 cccgatcgat ttacaggtgt tcgcatagtt cgcgggcgtc ttccagttga actggtagta
    10561 accgtcaccc aggttctgga gacctgagtt gccggcatac tcttcgatct gatccaggtc
    10621 ggtcgagacc gtgcactgca atccgctaac cgcgacgccc aaggccgtag gagcaaaatt
    10681 gaggaccggc gcgccgtaga agtccgtcag ccgccacttc aggggaatcc cctggccggc
    10741 cttggacaca ttcatcgcgt tcggtcggtc taccggagcg aagagcccgt cgaagttgta
    10801 cttcacctgc tgtgccagcg aactgtaact gccctcgaaa ttggtgttgc cggcgtagca
    10861 ggccgtgacc gtgtgtagcc cgacggcgag cgtcgacacg ttgaagctga cctggccgct
    10921 accggacagc gcggtcggtc cgccaatcgt tgtccccgcg gcgcaggacc cgtccttgag
    10981 cgtgacgtca ccctgcggcg tggcaactgc cggcgcgacc gggctcactg tcacgtcgaa
    11041 ggtgaccggc tgcgccagga tcgacggatt gaccgacgag gtgatcgccg tcgtcgtcga
    11101 ggcctggttc acctgctggg acacgaaccc gtcactttcc tcgaagctgg cattgcccgc
    11161 gtagcagccg gtgacattgt gggctccgac ggccagggcc gagacattga agctcgccgt
    11221 tccgctgcca ctcagtgcgg tcggtccgcc gagcgtcgta ccggcggcgc agcttccgtc
    11281 cttgagggtc acggcacctt gcggcacagc caccgccggt gtcaccgggg tgacggtcac
    11341 cgtgagcgtc accgcctggc tgaagaccga tggattggcg ttcgaggaga ccgctgtcga
    11401 agtctcggcc ttgttcacga cctgggagac atcgccgtcg ctaggctcga agttggagtt
    11461 gcccgc
//
LOCUS       DASUYN010000378         3131 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_118311, whole genome shotgun sequence.
ACCESSION   DASUYN010000378 DASUYN010000000
VERSION     DASUYN010000378.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3131)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3131)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3131
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_118311"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1383)
                     /locus_tag="VF061_07415"
     CDS             complement(<1..1383)
                     /locus_tag="VF061_07415"
                     /inference="COORDINATES: protein motif:HMM:NF012239.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2 N-terminal
                     domain-containing protein"
                     /protein_id="HEX6669371.1"
                     /translation="MVKTRVHDLAAEFGVAPEQLLGMLKDMNIFVRSHLSALENDQVS
                     AIRVRWEREKRKSAEEPTAKKGRRKAVKAEPPPPPVEARPAKRRRTAAEVAVAEAQAQ
                     SEREAELAALELERPVVHELEEPAPAQSLEERARALFKDLPPVPAEPYDDSGAPTTTE
                     EPAAQPVDAAAAAPPRPAAPSGPTRAPFIPPRIQRPPASPRGPKPVFSSSAPAAPGRP
                     GAPSRPGPGAPPARTFGPDAEKGGGRKKGKKGKRSMVDQDAVQANILRTLQGMKGGAG
                     RKGRRSDEPSFRDVQAGRMAEEREKEKTRIRVNEFISVSELAGAMKVPATQIVQFAFK
                     ELGLMVTVNQRLDFDQIELIASAFGFEAVREDEYAAQAEADQVEESPEQLAARPPVVT
                     IMGHVDHGKTSLLDYVRKANVVAGEAGGITQHIGAYHVTLPGDRKITFLDTPGHQAFT
                     AMRARGAQVTD"
     gene            complement(1395..1700)
                     /locus_tag="VF061_07420"
     CDS             complement(1395..1700)
                     /locus_tag="VF061_07420"
                     /inference="COORDINATES: protein motif:HMM:NF013417.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal L7Ae/L30e/S12e/Gadd45 family protein"
                     /protein_id="HEX6669372.1"
                     /translation="MRRVLGLIGLGYRARNVVVGVDAVRKELQAGKCWCVVVAEDASP
                     RAVDKVVRLAAAKGVPLVTGPGAAAIGAQLGKPPVMAVGVRDRALADGIVSPAPART"
     gene            complement(1697..3016)
                     /gene="nusA"
                     /locus_tag="VF061_07425"
     CDS             complement(1697..3016)
                     /gene="nusA"
                     /locus_tag="VF061_07425"
                     /inference="COORDINATES: protein motif:HMM:TIGR01953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor NusA"
                     /protein_id="HEX6669373.1"
                     /translation="MAGSTEMLAAFRELTTAKQLERSDLLELLRDGIQAALVRKFGPN
                     VKFELNVDELQGTIRVVRLRQVVEAVEDASWQIALEEAQYEDPDFQLGDMLEEEVPFV
                     DFGRLAVQAAKQRIIQRVREGERARIREEFTSKVGELLSGEVQQIERGKLVIMLNKFR
                     EAEAIIPYREQNHREHFHQGDTIRAVLKRLEETPKGPRLILSRGDPLFVKALFKLEVP
                     EIQQQIVEIRAIAREVGSRTKVAVISRDDSIDPVGACVGLKGSRVQAVVNELGGERID
                     IVPWSPDPERFARLALAPARVAKVFSDPEAKTIQAVVDEDQLSLAIGRNGQNVRLASE
                     LTGWKIDLYSSREWLERGGEGPLFAPLPPEEEMASQVPLSELQGLSPELTAILENAGY
                     RMLNDILDLEREDIARISGMSPEAADQLMTFLAELTEEGGEENQNRE"
BASE COUNT          409 a         1168 c         1053 g          501 t
ORIGIN      
        1 gtccgtcacc tgcgcgccgc gcgcccgcat ggcggtgaac gcctggtggc ccggggtgtc
       61 gaggaaggtg atcttccggt cgcccggcaa ggtgacgtgg tacgccccga tgtgctgggt
      121 gatgccgccg gcttcgcccg ccaccacgtt ggccttccgg acatagtcga gcagcgacgt
      181 cttgccgtgg tccacgtgac ccatgatggt gacgaccggc gggcgagccg cgagctgctc
      241 cgggctctcc tccacctggt ccgcctccgc ctgggccgca tactcatcct cgcgcaccgc
      301 ctcgaacccg aacgcggacg cgatcagctc gatctggtcg aaatcgagcc gctggttcac
      361 cgtcaccatc aggcccagct ccttgaaggc gaactggacg atctgagtgg cggggacctt
      421 catggcgccg gcgagctcgg agaccgagat gaactcgttc acccggatcc gggtcttctc
      481 cttctcacgc tcctcggcca tccgcccggc ctgcacgtcg cggaacgagg gctcgtcgga
      541 gcggcgaccc ttgcggcccg cgccgccctt catgccctgc agggtgcgca ggatgttggc
      601 ctgtaccgcg tcctggtcca ccatcgagcg cttgcccttc ttgcccttct tccggccgcc
      661 gcccttctcg gcatcgggac cgaaggtgcg ggccggcggg gcgcccggcc ccggacgact
      721 cggcgcaccc ggccggccgg gggccgcggg cgcgctgctg ctgaagacgg gtttggggcc
      781 gcgcgggctc gccggcgggc gctgaatccg gggcggaatg aacggcgcgc gggtgggacc
      841 ggagggcgcc gcggggcgcg gcggggccgc ggcggcggca tccacgggct gagccgcggg
      901 ctcctcggtc gtggtcggcg cgcccgagtc gtcgtagggc tccgccggca cgggcggcag
      961 gtccttgaag agcgcgcggg cgcgctcctc gaggctctgc gccggcgcgg gctcctcgag
     1021 ctcgtgcacc accggacgct ccagctcgag cgccgcgagc tcggcctcgc gctccgactg
     1081 tgcctgcgcc tcggccaccg cgacttcggc cgcggtgcgc cggcgcttgg cgggccgggc
     1141 ctcgaccggg ggtgggggtg gctccgcctt cacggccttg cggcgaccct tcttcgcggt
     1201 cggctcttcg gcgctcttcc gcttctcccg ctcccagcgc acccggatcg ccgacacctg
     1261 gtcgttctcc agggcggaga gatggctccg cacgaagatg ttcatgtcct tgagcatgcc
     1321 gagcagctgc tcaggggcta cgccgaactc cgcggcgaga tcgtgaactc gcgtcttgac
     1381 cactcaggcc tccatcaggt acgtgcgggc gccggcgaca cgatgccgtc ggccaacgcg
     1441 cggtcccgca ccccaaccgc catcaccggc ggcttcccca actgcgcgcc gatcgcggcg
     1501 gcgcccggcc cggtgaccag cggcacgccc ttggccgccg ccagccggac caccttgtcc
     1561 acggcgcgcg ggctggcgtc ctccgccacc accacgcacc agcacttccc ggcctgcaat
     1621 tccttccgaa ccgcgtccac cccgacgacc acgttgcgcg cccgataacc cagaccgatc
     1681 aggcccagga cccgtctcat tcgcggttct ggttctcctc gccgccttcc tcggtgagct
     1741 cggcgaggaa cgtcatcagc tggtccgccg cctcggggct catccccgag atgcgggcga
     1801 tgtcctcccg ctccaggtcg aggatgtcgt tcagcatccg gtagccggcg ttctccagga
     1861 tggccgtcag ctcgggcgac agaccctgca gctcgctgag cggcacctgg gaggccatct
     1921 cctcctcggg cgggagcggc gcgaacagcg ggccctcacc gccgcgctcg agccactcgc
     1981 ggctggagta gagatcgatc ttccagccgg tgagctcgga ggcgagccgc acgttctgcc
     2041 cgttgcggcc gatggccagc gacagctggt cctcgtccac cacggcctgg atggtcttgg
     2101 cctcgggatc ggagaagacc ttggccacgc gcgcgggggc gagcgccagc cgggcgaacc
     2161 gctcgggatc cggcgaccac ggcacgatgt cgatccgctc gccgcccagc tcattcacga
     2221 ccgcctgcac ccgcgagccc ttgaggccca cgcaggcgcc gaccggatcg atcgaatcgt
     2281 cgcgggagat gacggcgacc ttggtccggc tgccgacctc gcgggcgatg gcccggatct
     2341 cgacgatctg ctgctggatc tcgggcacct cgagcttgaa cagggccttg acgaagagcg
     2401 gatcgccccg ggagaggatg agccgcggcc ccttgggcgt ctcctccagc cgcttgagca
     2461 cggcccggat ggtgtcgccc tggtggaagt gctcgcggtg gttctgctcc cggtagggga
     2521 tgatcgcctc ggcctcgcgg aacttgttga gcatgatgac gagcttgccg cgctcgatct
     2581 gctggacctc gcccgagagc agctcgccca ccttggaggt gaactcctcc cggatccggg
     2641 cccgctcgcc ctcgcgcacc cgctgaatga tccgctgctt ggccgcctgc accgcgagcc
     2701 gcccgaagtc cacgaagggg acctcctcct ccagcatgtc gccaagctgg aagtcagggt
     2761 cctcgtactg ggcctcttcg agggcgatct gccagctggc atcctccacc gcctctacca
     2821 cctggcggag ccgcacgacg cggatggtgc cctgcagctc gtccacgttc agctcgaact
     2881 tgacgttcgg cccgaacttg cggaccagcg ccgcctggat cccgtcgcgc agaagctcga
     2941 ggagatcgga gcgctcgagt tgtttcgcgg tcgtcagctc gcggaacgcg gccaacatct
     3001 cggtcgaacc tgccatcggt gttactccaa ggaatcgggg ccccgccgcc tgcccacggt
     3061 ggcccagtcc acccacagcg tcgcttcgct gatcgcgtcg agaccgaggg tgacctctcc
     3121 gccctcctcg g
//
LOCUS       DASUYN010000379         2560 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1883888, whole genome shotgun sequence.
ACCESSION   DASUYN010000379 DASUYN010000000
VERSION     DASUYN010000379.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2560)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2560)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2560
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1883888"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1424
                     /locus_tag="VF061_07430"
     CDS             <1..1424
                     /locus_tag="VF061_07430"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="M28 family metallopeptidase"
                     /protein_id="HEX6669374.1"
                     /translation="RFAALGLDSAGTEGYFQPVPFLHSVAAGGSSMVLAGRAKRHVLS
                     PYRDYVPSPNYLLPRAEVTAPVVLAGFGVTAPDHGYDDYRGVDARGKIVVLLTGAPSS
                     FPPTERAHHATPRMKGENAVRHGAVGILVVRTPDQTFPWDRLVRQSRAGGLRWLDPKG
                     EPADVFPALRGAATLSDSAAGRLFEDAPAPLDRVLAEAAAGKPPAFDLPVRATLRTLS
                     EHRKIESPNVAGLLPGSDQRLRDEVLVYSAHLDHLGVGEPVEGDSIYNGALDNASGSA
                     ALLEVARAFAALPRPPRRSVLFLAVTGEEMGLLGSDYFAEYPTVAIDRIVANVNLDGL
                     SLLYPLRELVPLGAEHSTLDSTVARAARRLDITLAPDPFPQEVFFVRSDQYSFVRRGV
                     PSLFPFMGMRSDSGVDAAARFREWLATRYHTPQDDLDQPMDLEAGARHAQLAFLVGLE
                     VADGDQRPAWKAGDFFQRTFGTR"
     gene            1667..2464
                     /locus_tag="VF061_07435"
     CDS             1667..2464
                     /locus_tag="VF061_07435"
                     /inference="COORDINATES: protein motif:HMM:NF015862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HEX6669375.1"
                     /translation="MRPLHAYSMVAACALAAAGCGDDSPTEPAVQASSVANFLPSHNA
                     LRAALRDILEEQNGGLGFEMWATILDRNGKVVDVVFSGEQRGDQWPGSRVISAQKANT
                     ANAFSLEGFALSTANLFAAVQPGGSLFGLQESNPVDTRVAYAGPVSAYGKANDPMIGR
                     RIGGINVFGGGLAVYSPSGTLLGGLGVSGDTSCSDHIIAWKLRHALNLDNVPAGPDAA
                     SGTDNIIFTDGTLDGFEHPTCFDTDGQGDHVAIAEALPTTHPTGPEE"
BASE COUNT          364 a          952 c          863 g          381 t
ORIGIN      
        1 agcggttcgc cgctctgggc ctggactccg cggggaccga ggggtacttc cagccggtcc
       61 ctttcctcca ctccgtggcg gccggcggca gcagcatggt gctcgccggc agagcgaagc
      121 gacacgtcct ctcgccctac cgcgactacg tgccgtcgcc caactacctc cttccgcggg
      181 cggaggtgac cgcgccggtc gtcctcgcgg gcttcggcgt gaccgcaccc gatcacggat
      241 acgacgacta tcgtggggtg gacgccaggg gaaagatcgt cgtcctgctg accggggccc
      301 cgagctcgtt cccgccgacc gagcgggccc accacgccac gccccgcatg aagggcgaga
      361 acgccgtccg ccacggcgcg gtcggtatcc tggtcgttcg caccccggac cagactttcc
      421 cctgggaccg gctggtgcga caatcgcggg cgggtggctt gcgctggctg gacccgaaag
      481 gcgagccggc ggacgtgttc ccggcactga ggggggcggc gacgctctcc gattccgccg
      541 ccggccgact cttcgaggac gcgccggcgc ccctggaccg ggtactggcc gaggcggccg
      601 cggggaaacc gccggccttc gacctgccgg tccgcgccac tctgcgcacg ctcagcgagc
      661 accggaagat cgagagcccc aacgtggcgg ggttgctgcc cggctccgac cagcgcctga
      721 gagacgaagt cctcgtctac agcgcccacc tcgaccatct gggcgtgggc gagccggtgg
      781 agggggactc gatctacaac ggggcgctgg acaacgcctc gggcagcgcc gcgctgctcg
      841 aggtggcgcg cgccttcgcc gcgctgccgc ggccgccgcg gcgctcggtg ctcttcctcg
      901 ccgtcaccgg ggaggagatg gggctgctgg gcagcgacta cttcgccgag tatcccacgg
      961 tggcgatcga ccggatcgtg gcgaacgtga acctggacgg actctcgctc ctctatccgc
     1021 tgcgcgagct ggtgcctctc ggcgccgagc actccacgct ggactcgacg gtggcgcgcg
     1081 cggcccggcg actcgacatc acgctggcac ccgacccctt cccccaggag gtcttcttcg
     1141 tccgcagcga ccagtactcc ttcgtgcgca ggggcgtccc ctcgctcttc cccttcatgg
     1201 gcatgcgcag cgattccggg gtggatgccg cggcacggtt ccgcgagtgg ctcgccaccc
     1261 ggtatcacac cccccaggac gatctcgacc agcccatgga tctggaggcc ggggccaggc
     1321 acgcccagct cgccttcctg gtgggcctgg aggtcgcgga cggtgatcag cggccggcct
     1381 ggaaggcggg ggacttcttc cagcggacgt tcggcacccg ctgaccggcg ttcgggcccc
     1441 gcggcgtact tgtgcgccgc cgccacgcag gtaccttcga cagtcgctct gatcaccctc
     1501 gagcagagag gggccgatgg ctcctcgcac ccccgtgccc ggaaacggcc cgcagtcccg
     1561 cactcgccgc tgcttcagtg gcccgctcgg tcgtgcccga gacccgcctc ccgccgatcc
     1621 aaccgtccct cgcatccttc ctcacccctg agaatggagg atttccatgc gtccgcttca
     1681 tgcctactcg atggtggcgg cctgcgccct ggccgccgcc ggctgcggtg acgacagtcc
     1741 caccgagccc gccgtccaag cctccagcgt cgccaacttc cttcccagcc acaacgccct
     1801 ccgcgccgca cttcgcgata tcctcgagga gcagaacggc ggactcgggt tcgagatgtg
     1861 ggccacgatc ctcgatcgca acgggaaggt ggtggacgtg gtgttcagcg gcgagcagcg
     1921 gggcgaccag tggcccggca gccgcgtgat ctccgcgcag aaggccaaca ccgccaacgc
     1981 gttcagcctg gagggattcg ccctgagcac cgccaacctc ttcgccgcgg tgcagccggg
     2041 cgggagcctc ttcggactgc aggagagcaa tccggtggac acccgggttg cctatgccgg
     2101 accggtgtcc gcctacggca aggcgaacga tcccatgatc ggcaggcgca tcggcggcat
     2161 caacgtgttc ggcggcgggc tcgccgtcta ctcgcccagc ggcacgctgc tcggcggcct
     2221 cggcgtcagc ggcgacactt cctgcagcga tcacatcatc gcgtggaagc tccggcacgc
     2281 cctgaacctg gacaacgtgc ccgcgggccc ggatgccgcc agcggcaccg acaacatcat
     2341 cttcacggac ggtacgctcg acgggttcga gcatccgacc tgcttcgaca ccgacggcca
     2401 gggcgaccac gtggcgatcg ccgaggctct gccgaccacc catcccacgg ggcccgaaga
     2461 gtaggcggga ggacgtgccg acgtcggttc ggcgcccgtg cgagcggacg acgttgcccg
     2521 ctcgccgggc gcgcggggcc ggggcatctt tcgtcatcgg
//
LOCUS       DASUYN010000380         4801 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_341725, whole genome shotgun sequence.
ACCESSION   DASUYN010000380 DASUYN010000000
VERSION     DASUYN010000380.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4801)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4801)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4801
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_341725"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2431)
                     /locus_tag="VF061_07440"
     CDS             complement(<1..2431)
                     /locus_tag="VF061_07440"
                     /inference="COORDINATES: protein motif:HMM:NF024893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA-like C-terminal region-containing protein"
                     /protein_id="HEX6669376.1"
                     /translation="MTRPTRKILVIVGGLLALVLLAVVLLPLLFGGRIAERVKSEANQ
                     ALDAKVDWRGQSLGLFRDFPNLTLSLDDLSVVGVGKFEGDTLAAIRRFGVVLDLASAV
                     RSALGGSGPVVVRAIELDRPRLSLVKLKDGTANWDITRKDTTGAVPADTGAGRPLAVS
                     LRRFDMAGGSVAYDNQAGNMKASVVGFDQSLSGDFGNEQLTIRTRAHADSVSLTFAGI
                     PYLNRVRLDLSTDIAADLAKKSFTLKESAVRLNELTLAFSGSVASLADRLALDLAFGA
                     PKTEFRHILSLVPAVYARDFESVQTSGSLAVSGKVKGDYGEKAFPALSLNAKVENGTF
                     RYPDLPLPARDIALDLAVTNPGGDADSTTVDLRRLHVVLGSNPIDAVLVVRTPISDPD
                     VDARVAGKLDLADLRRTLKLEGVDELAGTVTADAAVRTRMSWLDSANPQYDRIGARGT
                     VDVAGLTVKSDSLPHALAIREASLRLAPRSAELRSFDATIGSSDLRLSGRLENLLGFA
                     LRDEVLRGSATLASNRFNLDEWRSDEGELSVIPVPANLDFGFDATVRELLFDKLTMRN
                     ARGRLRVKDERITLENFAFNTLGGEIAVNGFYETTDVAKPTFDVGLRIQKVDIPSAFE
                     AFTTVRMLAPVAKYATGTFSTDLKLNGALGQDMMPLFDALAGEGSLQTSILRLQDFPP
                     LDRVASLTKLSLLDDPGLKAVRSKFDIRDGRLHVQPFTVGLGETSMSVSGSNGIDQSL
                     DYDLSLRVPRGLLGAEADQAIAGLVSKAAGAGVDLQGARELALGIKLGGTITNPSIST
                     DIGSAAGSAVQS"
     gene            complement(2483..3259)
                     /locus_tag="VF061_07445"
     CDS             complement(2483..3259)
                     /locus_tag="VF061_07445"
                     /inference="COORDINATES: protein motif:HMM:NF017551.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NRDE family protein"
                     /protein_id="HEX6669377.1"
                     /translation="MCLILLAFGIHPDYSLIVAANRDEFYDRPTVRAGFWKDAPRVLA
                     GRDLRAGGTWLGIDRGGRFAAVTNYRQGQREPGAPRSRGHLVSEYLTGPGDGQAHMAR
                     VERNAGLYNGFNLVAGDVGALFYFSNRDGGVRALKPGVYGLSNHLLDSPWPKVTAGKS
                     GLSALLTGGSELLPSLFGLLADRRQAPDAVLPRTGMSPEWERLLSSAFIASEAYGTRS
                     STVVLVGRDRRVQFEERSFGPDGKSEATVRHEFVLERQTG"
     gene            3355..>4801
                     /locus_tag="VF061_07450"
     CDS             3355..>4801
                     /locus_tag="VF061_07450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669378.1"
                     /translation="MRIPEWLDLRKPASLLALVAVSFLVIVLVFRWWDSSVEERLTRW
                     AVDEVARQSDSTYRLDLGDLSFVPFAGSISFDSATVATDSARNRRRAVPLPTLQARAQ
                     ECRVSGLDLVQLLIRRSFNARALACRQVAAGIALPPATRDDSAAATDTAAVAASVQQL
                     VLPPGISSIRIAEVDFPALSVTLKRPGARGGTSVALERAQFHAGGVVVSPRAASADRA
                     RLEANGLLLRPDTLIEISAARLEADFIDSTLGLEGARHEPAIPEAEWARRVRVRRDRI
                     RFTLDSLQGRGVAYRGFLAGGAIGIRALELHGARLDVLSDRRIPKGPPRRHRTPQQVA
                     AQTLSPLRLDTVLVAGGAILYRERRPEGERPGVVSFEQVRATIRGLQLPSRGEPLKIE
                     ASARLMGEGPLTARATVPLDAPDFRYELSGRLDRMPAKALNRFLTENEAFHFDNGWLE
                     EITFSQTVRGGRAVTTVRPRYRELSVEPTGEG"
BASE COUNT          683 a         1654 c         1741 g          723 t
ORIGIN      
        1 ccgactgcac cgcggacccg gcggcgctgc cgatgtcggt ggagatcgag ggattggtga
       61 tggttccgcc gagcttgatg ccgagggcca gctcccgggc cccctggaga tcgacacccg
      121 ccccggcggc cttcgacacc aggccggcga tcgcctggtc ggcctcggca ccgagcagcc
      181 cgcggggtac ccggaggctg agatcgtagt cgagcgactg gtcgatgccg ttcgagcccg
      241 agacgctcat gctcgtctcc cccagcccga cggtgaacgg ctggacgtgg agccgtccgt
      301 cgcggatgtc gaacttcgag cgcaccgcct tgagccccgg gtcgtccagg agcgacagct
      361 tggtgagact ggccacccgg tcgaggggcg gaaaatcctg cagccggaga atcgaggtct
      421 ggaggcttcc ctcgccggcg agcgcgtcga acagcggcat catgtcctgc cccagcgcgc
      481 cgttcagctt gaggtcggtg gagaacgtgc cggtggcgta cttcgccacc ggcgccagca
      541 tccgtaccgt ggtgaaggcc tcgaaggcgc tggggatgtc caccttctgg atccggagcc
      601 ccacgtcgaa cgtcggcttc gcgacgtcgg tcgtctcgta gaagccgttg accgcgatct
      661 ccccgcccag ggtgttgaag gcgaagttct ccagggtgat ccgctcgtcc ttcacccgga
      721 gccgtcccct ggcgttccgc atcgtcagct tgtcgaacag cagctcgcgc accgtggcgt
      781 cgaagccgaa atcgaggttg gccggcaccg ggatgacgct cagctccccc tcgtcgctgc
      841 gccactcgtc gaggttgaac cggttgctcg ccagggtcgc gcttccgcgg agcacctcgt
      901 cgcggagggc gaagcccagc aggttctcga gccggccgga gaggcggagg tcgctgctcc
      961 cgatcgtggc gtcgaaggag cgcagctccg cgctccgcgg cgcgagccgc agggacgcct
     1021 cgcggatggc gagcgcgtgg ggcagggagt ccgacttcac ggtgaggccc gcgacgtcca
     1081 ccgtcccccg ggccccgatc cggtcgtact gggggttggc gctgtcgagc cacgacatcc
     1141 gggttcgcac cgcggcgtcc gccgtgacgg tgcccgccag ctcgtctaca ccctcgagct
     1201 tgagggtgcg gcggaggtcg gcgaggtcga gcttcccggc cacgcgggcg tccacgtcgg
     1261 gatcggagat cggggtccgg accaccagca cggcgtcgat cggattgctg ccgagcacga
     1321 cgtggagccg ccggaggtcg acggtggtgc tgtcggcgtc gccaccgggg ttggtgaccg
     1381 cgaggtcgag ggcgatgtcg cgcgcgggga gcggcaggtc gggatagcgg aaggtgccgt
     1441 tctcgacttt ggcgttgagc gacagcgccg ggaaggcctt ctcgccgtag tcgcctttca
     1501 ccttgcccga gacggcgagc gagccggacg tctgcaccga ctcgaagtcc cgggcgtaga
     1561 ccgcggggac cagcgagagg atgtggcgga actcggtctt gggcgcgccg aaggcgaggt
     1621 cgagcgcgag ccgatccgcg agcgaggcga cgctgccgga gaaggcgagg gtcagctcgt
     1681 tgagccggac tgcgctttcc ttgagcgtga agctcttctt cgcgaggtcg gcggcgatgt
     1741 cggtgctgag gtcgagccgg acccggttga ggtaggggat cccggcgaac gtaaggctca
     1801 ccgagtccgc gtgggcccgg gtccggatcg tgagctgctc gttgccgaag tcgcccgaga
     1861 gcgactggtc gaagcccacg accgaggcct tcatgttccc ggcctggttg tcgtaggcca
     1921 ccgacccacc ggccatgtcg aagcgccgga ggctcaccgc cagggggcgg cccgccccgg
     1981 tgtcggcggg cacggccccg gtggtgtcct tcctggtgat gtcccagttg gcggtgccgt
     2041 ccttcagctt caccagggag agccggggac ggtcgagctc gatcgcgcgc accacgaccg
     2101 gcccggagcc gccgagcgcg ctgcggaccg cgctggcgag gtcgaggacg acgccgaagc
     2161 ggcggatcgc ggcgagcgtg tcaccctcga acttgccgac gcccaccacg ctgagatcgt
     2221 cgagactcag cgtcaggttg gggaagtcgc gaaagaggcc gaggctctgg ccgcgccagt
     2281 ccactttcgc gtcgagcgcc tggttcgcct ccgacttcac ccgctcggcg atccggccgc
     2341 cgaagaggag cgggaggagg accacggcca ggaggaccag ggcgagcagg ccccccacga
     2401 tgacgaggat ttttcgggtc ggacgggtca tgcctttaag ctagcgcggt ccggccggaa
     2461 gaacccccgc cgaatgccga cgtcagccgg tctgccgctc gagcacgaat tcgtggcgca
     2521 ccgtcgcctc ggacttcccg tccggcccga agctccgttc ctcgaactgc actcggcggt
     2581 cgcgcccgac gaggaccacg gtcgaggagc gggttccgta cgcctccgag gcgatgaagg
     2641 ccgaggagag gagccgctcc cactccgggc tcatgccggt ccggggcagc acggcgtcgg
     2701 gcgcctgtcg gcggtccgcc agcagcccga agagactggg gagcagctcg ctgccgcccg
     2761 tcagcagggc gctcagtccg ctcttccccg ccgtcacctt gggccacggc gagtcgagca
     2821 ggtggttgct cagcccgtag accccgggct tcagcgcccg aacgccgccg tcacgattgg
     2881 agaagtagaa cagcgcgccc acgtcaccgg cgaccaggtt gaatccgttg tagagcccgg
     2941 cattgcgttc tacccgggcc atgtgggcct ggccgtcgcc cgggccggtg agatactcgc
     3001 tgaccagatg gccccgggag cggggcgccc ccggctcgcg ttgaccctgg cggtagttgg
     3061 tcaccgcggc gaaacgtccc ccccggtcga tgccgagcca ggttcccccc gccctgaggt
     3121 cacggccggc gaggacccgg ggagcgtcct tccagaaccc cgcgcgcacc gtgggccggt
     3181 cgtagaactc atcccggttc gccgccacga tgagggagta gtcaggatga atgccgaagg
     3241 cgagcaggat caggcacatg gattcccgct caatctcatg ggaacgaggc tcagggggaa
     3301 ccgggcggtg atccctgtca tggcgcccgc ggcgatggtc cgtatgcttc cggggtgcgg
     3361 atccccgaat ggctcgacct ccggaagccg gcgtccctcc tcgccctcgt cgcggtttcc
     3421 ttcctcgtca tcgtcctggt cttccgctgg tgggactcgt ccgtcgagga gaggctgacc
     3481 cgctgggcgg tggacgaggt ggcccggcag agcgacagca cctaccggct cgacctcggc
     3541 gacctctcgt tcgtgccgtt tgcgggctcc atctccttcg actcggccac ggtggcgacc
     3601 gactcggccc ggaaccgccg ccgggcggtg ccgctgccga cgctgcaggc gcgcgcccag
     3661 gagtgccgcg tgtccggact cgacctggtg cagctcctga tcaggcgatc gttcaacgca
     3721 cgggcactgg cctgccgcca ggtggccgcc ggcatcgcac ttccaccagc tacgcgcgac
     3781 gactcggctg ccgcgacgga cacggcggcc gtcgccgcat cggtgcagca gctggtgctg
     3841 ccgcccggta tctcctcgat tcgcatcgcc gaggtcgact ttcctgcgct gagcgtcacc
     3901 ctgaaacgac cgggcgctcg cgggggcacc tcggtcgcgc tcgagcgcgc ccaattccat
     3961 gcgggcggcg tcgtcgtcag cccgcgtgcc gcgtcggcgg atcgggcgcg gctcgaggcg
     4021 aatggcctgc tgctgcggcc cgatacgttg atcgagatct ccgccgcccg gctcgaggcc
     4081 gacttcatcg actccaccct cggcctcgag ggcgccaggc acgagcccgc gatccccgag
     4141 gcggagtggg cgcgacgagt gcgggtgcgc cgcgaccgga tccgcttcac gctcgacagc
     4201 ctgcagggtc gcggcgtcgc ctatcgcggc tttctcgcgg gcggcgcgat cggaatccgg
     4261 gcgctcgagc tgcacggcgc ccggctcgac gtcctgagcg accgccgcat ccccaagggt
     4321 ccgccgcgac gccaccgcac gccgcagcag gtggcggcgc agaccctgtc gccgctgcgg
     4381 ctggatacgg tgctcgtggc cgggggcgcc atcctgtacc gcgagcgcag gcccgagggc
     4441 gagcggcccg gcgtggtgag cttcgagcag gtgcgagcca cgattcgcgg tctgcagctg
     4501 ccttcgaggg gggagccgct gaagatcgag gcgagcgcgc ggctcatggg cgaggggccg
     4561 ctgaccgcgc gagcgacggt gcccctggac gcccccgact tccgttacga gctgtccggc
     4621 cggctcgacc ggatgccggc gaaggccctc aaccgtttcc tgacggagaa cgaggcgttc
     4681 catttcgaca acgggtggct ggaggagatc accttcagcc agacggtgcg cggtgggcgt
     4741 gccgtgacga ccgtgagacc gcgctatcgc gagctgtcgg tcgagcccac cggcgagggt
     4801 g
//
LOCUS       DASUYN010000381         3332 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1663834, whole genome shotgun sequence.
ACCESSION   DASUYN010000381 DASUYN010000000
VERSION     DASUYN010000381.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3332)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3332)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3332
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1663834"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..483
                     /locus_tag="VF061_07455"
     CDS             <1..483
                     /locus_tag="VF061_07455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669379.1"
                     /translation="LQAGAYAVLCFVSSDDGVPHLAKGMIRELAVVPAGQATQPEPRA
                     DARMALDDYGFALAPGLTAGRRTIRVENQGPQPHEVEFVKLQPGKTAADVLAWLRTEE
                     GPPPGEPLGGTVALQAGQVNYVIADFTAGDYALICFVPDSGDGRPHVAHGMVSQIRVN
                     "
     gene            complement(470..1264)
                     /locus_tag="VF061_07460"
     CDS             complement(470..1264)
                     /locus_tag="VF061_07460"
                     /inference="COORDINATES: protein motif:HMM:NF013245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX6669380.1"
                     /translation="MSAWSAVHGIVARDLARSTRQTSRLLGGVARPFMWLLLVGTGYN
                     AIARLDSGLPYQAFVFPGIVVMAALFGGTLTAVSTVYDREFGMLRLMLASPAGLHAVL
                     AGRAAAATLVGVLQGGIVLAFAPLVLDSSPARWLAALGALAVVSAMSAMLGLLMAARI
                     RSVENFAGIINVVLFPLLFLSGALYPTDGMPPVLRAVARANPVTYAVDLVRHAMGQPA
                     EVGVATAAGVVLGVLVLAFLLAALLFDPEQRFFPRRSAGSAPVSSP"
     gene            complement(1261..2199)
                     /locus_tag="VF061_07465"
     CDS             complement(1261..2199)
                     /locus_tag="VF061_07465"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX6669381.1"
                     /translation="MSPAIEAEGLGRDYGEVRALEGLDLTVPRGGAVGLLGPNGAGKT
                     TAMLLLATLLSPTRGTARIFGHDVVRDRRAVRRRLGLVFQETTVDGLLTVEENLLFAA
                     RLAGLSGRLARAAVADAIERGGLAPRARQPARELSGGWRRLADVVRATLHQPDLLILD
                     EPTIGLDPEHRDAVWTLLDAQRRTHGTTVLFSTHYLAEAEPADRVVLLARGRVVADDA
                     PGALRAELGQEIAEIEGPGAERLARAIRGLGAARVVLRTGRGIRAGITGQREPVVELA
                     GGAPGIERFSLRPTTLEDVYFARTQASAAADVPEPV"
     gene            complement(2196..3284)
                     /gene="pqqE"
                     /locus_tag="VF061_07470"
     CDS             complement(2196..3284)
                     /gene="pqqE"
                     /locus_tag="VF061_07470"
                     /inference="COORDINATES: protein motif:HMM:TIGR02109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0018149 - peptide cross-linking [Evidence
                     IEA];
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis protein
                     PqqE"
                     /protein_id="HEX6669382.1"
                     /translation="MTTDRPTTLLAELTHRCPLHCPYCSNPLEMVRAQGEMGTDDWKR
                     VFTEAKSLGVLQLGLSGGEPLIRKDLEELAAHARGLGLYTTLVTSGLGLTRPRAERLL
                     EAGLEHIQVSVQDVDPEVAERIAGVSSVKQKRAAVAIVKELGFAFSVNVVLHRANLDR
                     IGPIIDMAAELGADRIELANTQYYGWALENRATLMPTREQLARAQVTAEDRMRRYKGR
                     MQILFVLPDYFEQYPKPCYGGWGKLYLVVAPDGKVLPCHGATQITTMSFDNARERSLE
                     WIWQESSAFNAFRGDEWMREPCRSCPRKAVDFGGCRCQAFALTGAAENTDPVCVLSPH
                     RELIDAAVASPSDAMEYRYRVIAEPQRA"
BASE COUNT          498 a         1192 c         1213 g          429 t
ORIGIN      
        1 ctgcaggcgg gcgcgtacgc ggtgctctgt ttcgtctcgt cggacgatgg ggtgccgcac
       61 ctggccaagg ggatgattcg cgagctcgcg gtggtgccgg cgggtcaggc gacgcagccg
      121 gagccccggg ccgacgcccg catggcgctg gacgactacg gctttgccct cgcccccggc
      181 ctgacggctg ggcggcggac catccgggtg gagaaccagg gaccgcagcc gcacgaggtg
      241 gaattcgtca agctccagcc ggggaagacc gcggcggacg tgctggcgtg gctcaggacc
      301 gaggaggggc ccccgccggg tgagcccctg ggcggcaccg tcgcgcttca ggcgggccag
      361 gtaaactatg tcatagcgga tttcaccgcg ggggattacg cgctgatctg cttcgttccc
      421 gactcgggcg acggccgtcc ccacgtcgcg cacgggatgg tgagccagat cagggtgaac
      481 tgaccggcgc gcttcccgcg gaacgccgcg ggaagaagcg ctgctcgggg tcgaagagca
      541 gcgcggcgag caggaacgcg agcacgagga cgccgagcac gacgccggcg gcggtcgcca
      601 ccccgacctc cgccggctgg cccatcgcat ggcgcaccag gtccaccgcg taggtgacag
      661 gattggcccg cgccacggcg cggagcacgg gcggcatccc gtcggtcggg tacagggccc
      721 cgctcaggaa cagcagcgga aacagaacca cgttgatgat cccggcgaag ttctcgaccg
      781 accggatccg cgccgccatc agcaggccga gcatcgcact catggcggag acgacggcga
      841 gtgccccgag ggcggccagc caccgggccg ggctcgagtc cagcaccagg ggcgcgaaag
      901 cgagcacgat ccctccctgg agcacgccga ccagggtcgc ggcggcggcg cggccggcga
      961 gcaccgcgtg cagtccggcc gggctcgcca gcatcaggcg gagcatcccg aactctcggt
     1021 cgtacacggt ggaaacggcg gtcagcgtgc cgccgaacag cgcggccatc accacgatgc
     1081 cggggaagac gaacgcctgg tacggcagcc cgctgtccag tctcgcgatg gcgttgtagc
     1141 cggtgcccac cagcagcagc cacatgaacg ggcgcgccac gccaccgagg aggcggctgg
     1201 tctgtcgcgt gctgcgcgcg aggtcccggg cgacgatgcc gtgcacggcg ctccacgcgc
     1261 tcataccggc tccggcacgt cggcggcagc ggaagcctgg gtgcgcgcga agtacacgtc
     1321 ctcgagcgtc gtcgggcgca ggctgaagcg ctcgatcccg ggcgccccgc cggcaagctc
     1381 cacgaccggc tcgcgctggc ccgtaatgcc ggcccggatg ccccgcccgg tccggagcac
     1441 cacccgcgcc gcgcccaggc cgcggatcgc ccgcgccagc cgctccgcgc cgggtccttc
     1501 gatctccgcg atctcctgcc ccagctccgc acgcagcgcg cccggcgcgt cgtccgcgac
     1561 cacgcggccc cgggccagca gcaccacgcg gtcggccggc tcggcttcgg ccagatagtg
     1621 cgtggagaag aggacggtgg ttccatgggt gcggcgctga gcgtcgagca gcgtccacac
     1681 ggcatcgcga tgctcgggat cgaggccgat ggtgggctcg tccaggatca ggagatcggg
     1741 ctggtgcagg gtggcgcgca ccacgtcggc cagccggcgc cagccgccgg agagctcccg
     1801 cgcgggctgg cgggcgcggg gagccaagcc gccgcgctcg atcgcatcgg cgaccgcggc
     1861 ccgggccagc cggccgctca ggccggcgag ccgcgcggcg aagaggaggt tctcttcgac
     1921 cgtgaggagg ccgtccaccg tggtctcctg gaataccagc ccgaggcggc gccgcacggc
     1981 ccggcgatcg cggacgacgt cgtgcccgaa gatccgggcg gtgccacgcg tgggggagag
     2041 cagggtggcg aggagcagca tggcggtggt cttgcccgcg ccgttcggac ccagaagccc
     2101 gacagcgccg ccgcgcggca ccgtcagatc gagcccctcg agcgcgcgca cctcgccgta
     2161 gtcgcgcccg agcccctcgg cctcgatcgc ggggctcacg cccgctgcgg ttcggcgatc
     2221 acgcggtagc ggtactccat ggcgtcgctc ggcgatgcga ccgccgcatc gatcagctcc
     2281 cggtggggcg agagcacgca cacggggtcg gtgttctcgg ccgcgccggt gagggcgaag
     2341 gcctgacagc ggcagccgcc gaagtccacg gccttgcggg ggcagctccg acagggctcg
     2401 cgcatccact cgtcaccgcg gaaggcgttg aaggcagacg actcctgcca gatccactcc
     2461 agcgacctct cgcgcgcgtt gtcgaacgac atggtggtga tctgcgtcgc cccatggcag
     2521 ggcagcacct tcccatcggg cgccaccacc aggtagagct tcccccaccc gccgtagcac
     2581 ggcttcggat actgctcgaa gtagtcgggc aggacgaaga ggatctgcat gcggcccttg
     2641 tagcggcgca tccggtcctc cgccgtcacc tgggcccggg cgagctgctc ccgggtaggc
     2701 atcagcgtcg cacggttctc cagggcccac ccgtagtact gggtgttggc cagctcgatc
     2761 cggtcggcgc cgagctcggc tgccatgtcg atgatcgggc cgatacggtc gaggttggcc
     2821 cggtgcagca ccacgttcac ggagaaggcg aagcccagct ccttcacgat ggcgaccgcg
     2881 gcccgcttct gcttcaccga gctcaccccg gcgatcctct ccgcgacctc cggatcgacg
     2941 tcctggaccg acacctggat atgctccagc ccggcctcca gcagccgctc cgcgcgtggc
     3001 cgggtgaggc cgagccccga ggtgaccagg gtggtgtaga gcccgagccc ccgggcgtgg
     3061 gcggcgagct cctccaggtc cttccggatc agcggctcgc cgccggagag gccgagctgg
     3121 agaacgccga ggctcttcgc ctcggtgaag actcgtttcc agtcgtcggt gcccatctca
     3181 ccctgcgcgc gcaccatctc cagcgggttg gagcaatagg gacagtgcag cgggcagcgg
     3241 tgggtcagct ccgccagcag cgtggtgggt cggtcagtgg tcacggatca gctccctcgc
     3301 cgcgaggtcc gacaggtact gagcgacgtc cg
//
LOCUS       DASUYN010000382         2136 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1003866, whole genome shotgun sequence.
ACCESSION   DASUYN010000382 DASUYN010000000
VERSION     DASUYN010000382.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2136)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2136)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2136
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1003866"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2136
                     /locus_tag="VF061_07475"
     CDS             <1..>2136
                     /locus_tag="VF061_07475"
                     /EC_number="4.1.1.71"
                     /inference="COORDINATES: protein motif:HMM:NF008907.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004591 - oxoglutarate dehydrogenase
                     (succinyl-transferring) activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional oxoglutarate
                     decarboxylase/oxoglutarate dehydrogenase thiamine
                     pyrophosphate-binding subunit/dihydrolipoyllysine-residue
                     succinyltransferase subunit"
                     /protein_id="HEX6669383.1"
                     /translation="ASVPRLMAGQGSIIAVGAIGYPTEFSAVPEERLREFGISKVMTI
                     TSTYDHRVIQGAESGSFLAAVEGLLQGDDGFYELIEENLQLTAESYRLVKAAPPAKRE
                     EAAGPVAPEMLYHVAAAMALVKAFRMHGHLAAQLDPLGTPPIGDPALDPGPLGLTPEV
                     MAAIPSKVLRIAVPGRTLAESLPYLQATYCGTMAYEIEHISTHEERVWLREKIESGAY
                     RQPMAAEERRALLRRLTQVEALEKFLHKAYLGQKRFSIEGVDTLVPMLDLTIERAAES
                     GARDVVIGMAHRGRLNVLAHTVGRPYETIFAEFEGGRQVEGGQLTPEGGTGDVKYHHG
                     AEGAYVTSGGKAITVSLSPNPSHLEFVSPVVDGRARAKQTQRRGREAHHDPSAALPVA
                     IHGDAAFAGQGVVAETLNLGALKGYRTGGTLHLITNNQVGFTTDMEDARSTRYASDLA
                     KGFDIPIIHVNADDPEACLSAVRLAMAYRDRFHQDMLIDLVGYRRHGHNEGDEPAYTQ
                     PVMYERIRVLPTVRERYARTLVEAGVLSEEESGREAEQAYQRLVDIQQAFKASTGRTI
                     TKEREVRLSGAGQEVETALAPEFLRSLNEQLLSWPEGFTVHPKLGKQLERRRAALTEG
                     GIDWAHAEALSLASLLTEGVPLRLTGQDTERGTFSQRHLVLHDAKTGQSWAPIQKLPG
                     ALAPLELHNSPLSELATLGFEYGYSAAAPE"
BASE COUNT          338 a          752 c          767 g          279 t
ORIGIN      
        1 gcctcggtgc cgcggctcat ggccggccag gggagcatca tcgcggtcgg cgccatcggc
       61 tatcccaccg agttctccgc ggtgcccgag gagcggcttc gcgagttcgg catcagcaag
      121 gtcatgacca tcaccagcac ctacgaccac cgcgtcatcc agggcgccga atcggggtcg
      181 ttcctggcgg cggtcgaggg tctgctccag ggcgacgacg gcttctacga gctgatcgag
      241 gagaacctcc agctcacggc ggagagctac cggctggtga aggcggcgcc cccggccaag
      301 cgggaggagg cggcgggtcc ggtcgcgccg gagatgctgt accacgtggc cgcggcgatg
      361 gcgctggtga aggcgttccg catgcacggc cacctcgccg cgcagctcga cccgctcggc
      421 acaccgccga tcggcgaccc cgccctggac ccgggtccgc tcggcctcac tcccgaggtc
      481 atggcggcca ttccgtcgaa ggtgctccgc atcgccgtac ccggccgcac gctggccgag
      541 tcgctgccct acctccaggc gacctactgc ggcacgatgg cgtacgagat cgagcacatc
      601 tcgacccacg aggagcgcgt ctggctgcgg gagaagatcg agtccggggc ctatcgccag
      661 ccgatggctg ccgaagagcg gcgggcgctg ctccggcggc tcacccaggt ggaggcgctg
      721 gagaagttcc tccacaaggc ctacctgggc cagaagcggt tctcgatcga gggtgtggac
      781 acgctggtgc cgatgctcga tctcaccatc gagcgtgcgg cggagtcggg cgcgcgcgac
      841 gtggtcatcg ggatggcgca ccgcgggcgg ctcaacgtcc tcgcccatac cgtgggacgg
      901 ccgtacgaga ccatcttcgc cgagttcgag ggcggccggc aggtcgaggg cgggcagctc
      961 acgcccgagg gcgggaccgg cgacgtgaag taccaccacg gcgccgaggg ggcctacgtg
     1021 acctccggcg ggaaggccat caccgtctcg ctgtcgccca accccagcca cctcgagttc
     1081 gtctcgccgg tggtggacgg ccgagcccgc gcgaagcaga cccagcgccg gggccgcgag
     1141 gcgcaccacg atccctcggc cgcgctcccc gtcgccatcc acggcgacgc ggcgttcgcc
     1201 ggacaggggg tggtggcgga gacgctcaac ctgggggcgc tgaagggtta tcgcaccggc
     1261 gggacgctgc atctcatcac caacaaccag gtcggcttca ccaccgacat ggaggacgcg
     1321 cgctccaccc ggtacgcgtc cgacctcgcc aagggcttcg acatcccgat catccacgtc
     1381 aacgcggacg accccgaggc ctgcctctcc gcggtgcggc tggcgatggc gtatcgcgac
     1441 cggttccacc aggacatgct gatcgacctg gtgggctacc ggcgccacgg gcacaacgag
     1501 ggcgacgagc cggcgtacac ccagccggtg atgtacgagc ggatccgggt cctgcccacg
     1561 gtgcgcgagc gctatgcgcg gaccctggtc gaggccggtg tgttgagcga ggaggagagc
     1621 ggccgggagg cggagcaggc ctaccagcgg ctggtggaca tccagcaggc cttcaaggcc
     1681 agcacggggc gcaccatcac caaggagcgc gaggtgaggc tgagcggcgc gggtcaggag
     1741 gtggagaccg cgctcgcgcc cgagttcctg cgctcgctca acgaacagct gctctcctgg
     1801 cccgagggat tcacggtgca cccgaagctg ggcaagcagc tggagcggcg gcgcgccgcg
     1861 ctcaccgagg gcggcatcga ctgggcccac gcggaggcgc tgtcgctggc gtcgctgctg
     1921 accgagggcg tgccgctccg gctcaccggc caggataccg agcggggcac cttcagccag
     1981 cgtcacctgg tgctccacga cgcgaagacc gggcagagct gggccccgat ccagaaactg
     2041 cccggggcgc tggctccgct cgagctgcac aacagcccgc tctccgagct ggccaccctc
     2101 ggcttcgagt acgggtacag cgcggcggcg cccgag
//
LOCUS       DASUYN010000383         5903 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1003867, whole genome shotgun sequence.
ACCESSION   DASUYN010000383 DASUYN010000000
VERSION     DASUYN010000383.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5903)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5903)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5903
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1003867"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..613
                     /locus_tag="VF061_07480"
     CDS             <1..613
                     /locus_tag="VF061_07480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669384.1"
                     /translation="GFGLVMFARPNLEVISDTASHSFGRAFVTGLLGQILVLPTFGML
                     IVGLILSVAGILLLPFAVAVYALLVIVGALGGFLGVAHAMGETYTRRRMAMGALVGSP
                     NSYRYLVVGLGAVAVLWVAWSLFGWVPVAGTLIGGAAFLATWLLATAGFGAALLSRAG
                     IRENFAGRLIPPEALTDEYLWATPQFGVPAARRPGGRTPTRGL"
     gene            613..1458
                     /locus_tag="VF061_07485"
     CDS             613..1458
                     /locus_tag="VF061_07485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="LiaF domain-containing protein"
                     /protein_id="HEX6669385.1"
                     /translation="MHRLVLAALALAAGATNASAQSMRSFATFRQLHGETRLRADLEY
                     RAGGLRIAPGRANELYRMDASYDEDRYSPASTYDAARGVVSLGLRSSGQGGLRVVSTR
                     QLRQDANVAFAPSVDLHLDLTLGAVQADIELGGLSLTELTMEAGASQAVIRFSEPNQS
                     RCRAAEITAGAAELTVLGLGNSRCDRFELEGGMGKVTLDFGGAWTSSSQAEIKMAVGE
                     LNLRLPRRVGVRLTLDRFLASFEPAGLVRTGGAFQSPGYDRAERKLDIDVTTAVGGVK
                     VAWVE"
     gene            1522..2133
                     /locus_tag="VF061_07490"
     CDS             1522..2133
                     /locus_tag="VF061_07490"
                     /inference="COORDINATES: protein motif:HMM:NF024937.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4126 domain-containing protein"
                     /protein_id="HEX6669386.1"
                     /translation="MSPLETLGFALGTSFASGLNLYATVAAAGLFQRFGVVTLPEPLQ
                     VLAHPVVLGVAVALFLVEFIADKIPYVDSAWDALHTFIRPPAAAVLSYSAFAEGFPEE
                     WKLAAALLAGGVALTSHGAKASTRAAANASPEPLSNWTLSLLEDGFAVFLAWMAAEHP
                     LLTAAVVVVLVILAVFVIWKLFGYLRRALARLKRGPGPSPAEP"
     gene            complement(2114..2896)
                     /locus_tag="VF061_07495"
     CDS             complement(2114..2896)
                     /locus_tag="VF061_07495"
                     /inference="COORDINATES: protein motif:HMM:NF014003.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent chlorinase/fluorinase"
                     /protein_id="HEX6669387.1"
                     /translation="MRRVYFRTMTFITLLTDFGTSDSYVAEVKGTLLTRAPDATLVDV
                     SHALSPGDVRAAAYLLGRVWHRFPPGTVHFAVVDPGVGTERAALALTARGHWFVGPDN
                     GLFTVVLRDTEVQIVSLPTPQEASTTFHGRDLFAPAAAALASGTALAQLGEPFMGMPA
                     RLAFAEPRHEGKSVVGQVVYVDRFGTLVTNLTPALVPPYAVIEVEGLEVGPLRRTFGD
                     VPTGGLVAYLGSGGEVEVAVRDGSAARRLGMGVGGRIRARLG"
     gene            3025..3369
                     /locus_tag="VF061_07500"
     CDS             3025..3369
                     /locus_tag="VF061_07500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669388.1"
                     /translation="MPRQFGIFYPRGYVVVALRSAEAAKQLRRALLEGGYADDDVQLM
                     SMERVLEGASADLEQLTPLVRALGSETEATESHLAGPGHPAADERGPASRLREGAEVR
                     PVHRHGFVVPLG"
     gene            complement(3377..4483)
                     /locus_tag="VF061_07505"
     CDS             complement(3377..4483)
                     /locus_tag="VF061_07505"
                     /inference="COORDINATES: protein motif:HMM:NF022077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mrp/NBP35 family ATP-binding protein"
                     /protein_id="HEX6669389.1"
                     /translation="MAEPLQARVAAALARIRNPRLDNDLLSAGMIRDLAVSDDGAVSF
                     TFLLAPEDPATLVRQARTAVQEIDGVRRDAVKIAVTNPSGPAKVTHGPPGQAEGPPSQ
                     PAAPEMPDLGRIIAISSGKGGVGKSTVSANLAVALAAAGRRVGLMDADVYGPNIPRMF
                     GTSERPPVVGGKIQPLEAYGVRLMSLGFLVERDAPAIWRGPIIMKIVQQFLRDVEWGP
                     LDYFLVDLPPGTGDAQLSLVQATHVSGALIVTTPQEMAVGDALRGARMFERVGVPVLG
                     VVENMSGFVDPDSGRRLELFSSGGGRRLADELGVDLLVSVPLQPRLAELADAGRPILV
                     AEPGSPAAAELQALADQLLRKTSGRAAALPILRG"
     gene            complement(4483..4713)
                     /locus_tag="VF061_07510"
     CDS             complement(4483..4713)
                     /locus_tag="VF061_07510"
                     /inference="COORDINATES: protein motif:HMM:NF013286.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifU family protein"
                     /protein_id="HEX6669390.1"
                     /translation="MDTIDRIERTLDTLRPYIASHRGHVEVVDFDEGEGVLLLRLGGT
                     CHGCAASSVTLRQGIEARLREMVPEVKHVEAV"
     gene            complement(4792..5829)
                     /locus_tag="VF061_07515"
     CDS             complement(4792..5829)
                     /locus_tag="VF061_07515"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: protein motif:HMM:NF013528.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004527 - exonuclease activity [Evidence
                     IEA];
                     GO_function: GO:0008441 - 3'(2'),5'-bisphosphate
                     nucleotidase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional oligoribonuclease/PAP phosphatase
                     NrnA"
                     /protein_id="HEX6669391.1"
                     /translation="MPFALAPDRLQAARAFAATFHPGQRVCLTTHVNPDGDGLGSEAG
                     LAHLLRARGVDAVVTNPTPTPPRFGFLFEDLPGVDKTGEAVKELRRADRIVVLDIGDL
                     GRLGMLGEHVRAREVPVACIDHHVGAGALPDGPRYVDSEAAATGELVFELAVANDWTL
                     DQAAARGLYVAILTDTGGFRFSNTRPRTLRVAAELLETGVDPEEIYLEVYARAPEGRP
                     RLFAEALQTLVVEPEHGLAWVTVPPGAIERLGVSSDDLDGVVEFPRSIEGVRMALLFR
                     EVSQGRIKVSLRSIGPVDVATFAKRFGGGGHTKAAGLALTGSLAQVQATVLAAARDYL
                     GSNGGPGSPRG"
BASE COUNT          844 a         2095 c         2112 g          852 t
ORIGIN      
        1 cggcttcgga ctggtgatgt tcgcccgccc caacctcgag gtcatctccg ataccgcttc
       61 gcactccttc gggcgggcgt tcgtgaccgg gttgctggga cagatcctgg tgctccccac
      121 cttcggtatg ctgatcgtcg gcctgatcct gagcgtggcg ggcatcctgc tcctgccgtt
      181 cgcggtcgcg gtctacgcgc tgctggtgat cgtgggcgcc ctggggggat tcctcggcgt
      241 ggcgcacgcg atgggggaga cctacacccg gcgccgcatg gcgatgggcg ccctggtcgg
      301 ctcgccgaac agctatcgct atctggtggt gggactgggt gcggtggcgg tgctgtgggt
      361 cgcctggtcg ctgttcggct gggtgccggt ggccggcacg ctgatcggcg gcgcggcctt
      421 cctcgcgacc tggctgctgg ccacggcggg gttcggcgcc gcgctgctca gccgcgcggg
      481 catccgggag aacttcgcgg gccggctcat tccgcccgag gccctcaccg acgagtacct
      541 ctgggccacc ccgcagttcg gagttcccgc ggcccgccgc cccggtggcc ggacgcccac
      601 ccgggggctc tgatgcatcg gctcgtcctc gcggcgctgg ccctcgcggc gggcgcgacc
      661 aacgcctccg cgcagagcat gcggtcgttc gccaccttcc ggcagctcca tggtgagacc
      721 cgtctccgcg ccgacctcga gtaccgggcc ggcggccttc ggatcgcgcc cgggcgcgcc
      781 aacgagctct accggatgga cgcctcctac gacgaggacc gctactctcc cgccagcacc
      841 tacgacgccg cgcgcggcgt ggtcagcctc ggcctccgct cgagcgggca gggcggcttg
      901 cgggtcgttt ccacccgcca gctccgccag gatgccaacg tcgccttcgc cccgtcggtg
      961 gacctgcacc tcgatctcac cctgggcgcg gtgcaggcgg acatcgagct cggcgggctc
     1021 agcctgaccg agctcaccat ggaggcgggc gcgagccagg cggtcatccg cttctcggag
     1081 cccaaccagt cgcgctgccg cgcggcggag atcaccgcgg gcgccgcgga gctgaccgtg
     1141 ctgggcctgg gcaacagccg gtgcgaccgc ttcgagctcg agggaggcat ggggaaggtc
     1201 accctggact tcggcggcgc ctggacctcc agcagccagg cggagatcaa gatggccgtg
     1261 ggtgagctga atctccggct gccgcggcgc gtgggtgtgc ggctcacgct cgaccggttt
     1321 ctggcgagct tcgagcccgc agggctggtc cgcaccggcg gcgcgtttca gtcgcccggc
     1381 tacgaccgcg ccgagcggaa gctggacatc gacgtgacca cggcggtggg tggagtcaag
     1441 gtggcgtggg tggaatgacg gaacgccgat agacattcgc ttcccgctgc atcccgcccc
     1501 tcgacgcact agcttcattc catgtccccc ctcgagaccc tgggcttcgc cctcggcacc
     1561 tcgttcgcgt ccggcctcaa tctgtacgcc acggtcgccg ccgccgggct gttccagcgg
     1621 ttcggagtcg tgaccctgcc cgagccgctc caggtgctgg cgcacccggt ggtgctcggc
     1681 gtcgccgtcg cgctgttcct ggtggagttc atcgccgaca agatcccgta cgtggacagc
     1741 gcctgggatg cgctgcacac cttcatccgc ccgcccgcgg ccgcggtgct gtcctacagc
     1801 gcgttcgcgg agggattccc cgaggaatgg aagctggccg cggccctgct cgcggggggc
     1861 gtcgcgctga cctcgcacgg cgccaaggcg agcacccgcg ccgcggccaa cgccagcccg
     1921 gagccgctga gcaactggac gctgagcctg ctggaggacg gcttcgcggt cttcctggcc
     1981 tggatggcgg cggagcaccc tctgctcacg gccgcggtgg tggtggtgct ggtgatcctt
     2041 gccgtgttcg tgatctggaa gctcttcggc tatctgcgcc gagcgctcgc ccggttgaaa
     2101 cgggggccgg ggcctagccc agccgagccc tgatcctccc gccgacaccc atgcccaacc
     2161 ggcgggccgc ggagccgtcg cgcaccgcga cctcgacctc gccgcccgat ccgagatagg
     2221 ccaccagccc accagtcggc acgtccccga aggtgcggcg gagcggcccc acctccaggc
     2281 cttccacttc gatcaccgca tacgggggca ccagcgcggg ggtcaggttc gtcaccagcg
     2341 tgccgaagcg atccacgtac accacctggc cgaccacgct ctttccctca tggcgcggct
     2401 ccgcgaacgc cagccgcgcc ggcattccca tgaacggctc ccccagctgt gcgagcgcgg
     2461 tcccggaggc gagcgccgcc gcggccggcg cgaagaggtc ccgcccgtga aacgtggtcg
     2521 aagcctcctg cggcgtcggc agggagacga tctgcacttc ggtatcgcgc agtacgacgg
     2581 tgaagaggcc gttgtcgggc cctacgaacc agtgaccgcg cgccgtcagc gccagggcgg
     2641 cacgctcggt gccgacgccg ggatccacca cggcgaagtg gaccgtcccc ggcggaaacc
     2701 gatgccacac ccggccgagg aggtacgctg cggcccggac gtctcccggc gagagcgcat
     2761 ggctgacatc caccagcgtg gcgtcgggag ctctggtcag cagggtgccc ttcacctcag
     2821 cgacgtagga gtcgctggtg ccgaaatccg tgagcagcgt gatgaaggtc atggtgcgga
     2881 agtatacccg gcgcacgatg ccgctcggag tgcgcccttc acaggacagc ctgggacccc
     2941 taccctgatg gaggtgcggg gcgcagcgga taaccacttc agtgacgggg gtccatgatg
     3001 gcggaacacc agaagtcacc ggggatgccg agacagttcg gcatcttcta ccctcgtggc
     3061 tacgtcgtgg tggcgttgcg atcggcggag gccgcgaaac agctgagacg ggcgctcctg
     3121 gaaggcggct acgccgacga cgacgtccag ctcatgtcca tggagcgggt gctggagggg
     3181 gcttcggcgg acctggagca gctgaccccc ctggtgcggg ccctgggctc ggagaccgag
     3241 gcgaccgaga gccacttggc gggacctgga cacccagcgg ctgatgaacg tggcccggcg
     3301 agtcggttac gtgaaggcgc agaagtacga ccggttcacc gtcacggatt tgtagtgccg
     3361 ctcgggtgac cggcgatcag ccccgcagaa tggggagtgc ggccgcgcgc ccggaggtct
     3421 tccgcagcag ctgatcggcg agggcctgga gctccgccgc cgccgggctc ccgggctcgg
     3481 ccacgaggat gggccggccg gcgtcggcca gctccgccag gcggggctgg aggggcacgc
     3541 tcaccaggag gtccaccccg agctcgtccg cgagccggcg gccgccgccc gaggagaaca
     3601 gctccagccg ccggccgctg tccgggtcca cgaagccgct catgttctcc acgacaccga
     3661 gcaccggcac gccgacgcgc tcgaacatcc gggcgccccg gagcgcgtcg cccacggcca
     3721 tctcctgcgg cgtggtcacg atcagggcgc cggagacgtg cgtcgcctgc accagggaga
     3781 gctgcgcatc gccggtgccg ggcgggaggt ccaccaggaa gtagtccagc ggtccccact
     3841 ccacgtcgcg caggaactgc tgcacgatct tcatgatgat cgggccccgc cagatggccg
     3901 gcgcgtcgcg ctccaccagg aagccgagcg acatgagccg gaccccgtag gcctccagcg
     3961 gctggatctt gccgccgacc accggcggcc gctcggaggt tccgaacatg cgggggatgt
     4021 tgggcccgta cacgtcggcg tccatcaggc cgactcgccg gccagcggcg gccagggcga
     4081 ccgccaggtt ggccgagacg gtggacttcc ccaccccgcc cttgcccgag gagatggcga
     4141 tgatgcggcc gagatcgggc atctcgggtg cggccggctg ggagggcggg ccctcggcct
     4201 gaccgggagg accgtgggtg accttcgccg gtcccgacgg gttggtcacc gcgatcttga
     4261 ccgcgtcccg ccggacgccg tcgatctcct ggaccgcggt gcgggcctgc cgcaccagcg
     4321 tcgcggggtc ctcgggagcc agcaggaacg tgaagctcac cgccccgtcg tcgctcaccg
     4381 cgaggtcgcg gatcatgcca gcggacagca gatcgttgtc tagccgggga ttgcggatgc
     4441 gggcgagcgc ggcggcgacc ctggcctgca gcggctccgc catcagacgg cctccacgtg
     4501 cttgacctcg ggcaccatct cgcgcagccg cgcctcgatg ccctggcgca gcgtcacact
     4561 ggaggcggca cagccgtgac aggtcccccc cagccgcagc aggagcacac cctccccctc
     4621 gtcgaagtcc accacctcga cgtggccccg gtgggaggcg atgtacggcc ggagcgtatc
     4681 cagcgtgcgc tcgatgcgat caatcgtgtc catgcgcacc cgatcggcga attcctactt
     4741 ccatagtcgg caatataggt tttccgaggg gacggtcaac catgcggggg atcaaccgcg
     4801 cggggagccg gggccgccat tgctccctag gtagtcgcgc gctgcggcga ggacagtcgc
     4861 ctgcacctgc gcgagcgagc cggtgagcgc cagaccggcc gccttggtgt gaccgccgcc
     4921 gccgaagcgc ttggcgaagg tggccacgtc caccggcccg atggagcgga gggagacctt
     4981 gatccgtccc tggctcacct cgcggaagag gagcgccatg cggacgcctt cgatcgagcg
     5041 gggaaactcg accaccccgt cgaggtcgtc cgaggacacg ccgagccgct cgatcgcgcc
     5101 cggcggcacg gtgacccagg cgagcccgtg ctccggctcc accaccaggg tctggagcgc
     5161 ctcggcgaag agccggggcc ggccctcggg cgcgcgggcg tagacctcga ggtagatctc
     5221 ctccgggtcc acgccggtct cgagcagctc cgccgcgacc cgcagggtgc ggggacgggt
     5281 attgctgaag cggaagccgc cggtgtcggt gaggatcgcc acgtagagcc cgcgcgccgc
     5341 ggcctggtcg agcgtccagt cgttcgcgac ggcgagctcg aacaccagct cacccgtggc
     5401 cgcggcctcg gaatccacgt agcggggccc gtccggcagc gcccctgccc cgacgtggtg
     5461 gtcgatacag gcgaccggta cctcgcgggc gcggacgtgc tcacccagca tgcccaaccg
     5521 cccgaggtcg ccgatgtcga gcaccacgat gcggtcggcg cgccgcagct ccttcaccgc
     5581 ctcgcccgtc ttgtccaccc cgggcaggtc ctcgaacagg aagccgaatc gcggcggcgt
     5641 cggcgtgggg ttggtgacca cggcgtccac gccccgcgcc ctgagcaggt gcgccaggcc
     5701 cgcctcgctg cccagcccgt caccgtcggg attgacgtgc gtggtgaggc acacccgctg
     5761 tccaggatgg aacgtggcgg cgaaggcgcg ggcggcctgg aggcgatcgg gagcgagggc
     5821 gaacggcata gtggggaaga taatgagagc ggtaaggcgg taaggcggta aggcggtaag
     5881 gcggtaaggc ggtaaggcgg taa
//
LOCUS       DASUYN010000384         2517 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1004042, whole genome shotgun sequence.
ACCESSION   DASUYN010000384 DASUYN010000000
VERSION     DASUYN010000384.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2517)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2517)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2517
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1004042"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2385
                     /gene="priA"
                     /locus_tag="VF061_07520"
     CDS             <1..2385
                     /gene="priA"
                     /locus_tag="VF061_07520"
                     /inference="COORDINATES: protein motif:HMM:TIGR00595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005658 - alpha DNA polymerase:primase
                     complex [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HEX6669392.1"
                     /translation="PLPLAISYTYRIPETLADRVAPGARVVVPVRRRELIGIVLETDA
                     PPPQAAARDVLGAPDDLPAVPEGLLATARWMADYYGSPIGLTLKAMLPAGLWGESQVM
                     AVRAPGRWKIGGVAGEVLEQLEERGGEASVPLLSRVLRRPVWDAVHRLAAVGAVQLRV
                     DPPDTTGSAATERVVALHGEPPTLLERATLFKRRARRRELYEALESLGGSAQVHHVVD
                     QLGFGEAVIRGLVSQGLAKLTTAERVRDPFADTAGTPPPETLTPAQAEAVEAIDSLPP
                     GAGALLFGVTGSGKTLVYLEAVKRVLARGGGAIVLVPEIGLTPQAVSRLRGAFGDQVA
                     VLHSALSDGERADAWRLLRRGERRVAVGARSAIFAPVPDLGIVVVDEEHEASYKNGEA
                     PRYHTRDVAAVRAHLEGASLVLGSATPSLEAMARAEDRLRLLRLPERIGARPLPPVEI
                     VDLRVAPKVTGTGPVAWSVALDSAISETLARREQALLLLNRRGYAAFLHCPDCGEVWQ
                     CPRCTISLTVHRAPAGLRCHYCGHEEPLPFSCRKCANPVQQMRGVGTQQLEQVLAERY
                     PGARVARMDLDTTSTKWSHQRILGTVERGEVDLLIGTQMIAKGLDFPNVTLVGVVDAD
                     TGLYLPDFRAAERTFQLLAQVAGRAGRGPKGGRVIVQTRHPQHHALVWAARHDVEGFL
                     REELELRRAPPYPPEVHLVNLVVSSEDEARTANRTAELADWCSALVTRHALPVTVLGP
                     APCPLARIKDRWRWHVLLKGPQEVLGRIVRYAARRLPRTGPLRIVIDRDPVSLL"
BASE COUNT          325 a          891 c          963 g          338 t
ORIGIN      
        1 ccgctcccgc tcgccatctc gtacacctac cgcattcccg agacgctggc cgaccgggtc
       61 gccccggggg cccgggtggt cgtgccggtg cgccggcgcg agctgatcgg catcgtcctg
      121 gagaccgacg cgcctccgcc ccaggccgcg gcccgcgacg tcctcggcgc gcccgacgac
      181 ctgccggccg tgcccgaggg cctgctcgcc accgcccgct ggatggcgga ctactacggc
      241 tcgccgatcg gactcaccct caaggccatg ctccccgcgg gactgtgggg agagtcgcag
      301 gtgatggcgg tgcgggcccc gggccggtgg aagatcggtg gggtggcggg cgaagtgctg
      361 gagcagctcg aggagcgggg cggagaggcg tcggtcccgc tgctctcgcg agtgctgcgc
      421 cggccggtgt gggacgccgt gcaccggctc gccgcggtcg gcgccgttca gctcagggtc
      481 gacccgcccg acaccaccgg ctcggccgcc accgagcggg tggtcgctct tcacggcgag
      541 ccgccgacgc tgctcgagcg tgccaccctg ttcaagcgtc gcgcccggcg ccgcgagctc
      601 tacgaggccc tcgagtcgct tggcgggagc gcccaggtgc accacgtcgt ggaccagctc
      661 ggcttcgggg aggcggtgat ccgcgggctc gtgtcacagg gcctcgcgaa gctcaccacg
      721 gcggagcggg tgcgtgatcc gttcgccgac accgccggca cgcccccgcc ggagacgctc
      781 acgcccgccc aggcggaggc cgtggaggcg atcgactcgc ttccgccggg cgcaggggcg
      841 ctgctgttcg gcgtcaccgg cagcgggaag acactggtgt acctggaggc ggtgaaacgg
      901 gtgctcgcgc ggggcggggg tgccatcgtg ctggtgccgg agatcggact gactccccag
      961 gcggtgagcc gcctccgtgg cgccttcggg gatcaggtcg cggtgctgca cagcgcgctc
     1021 tcggacgggg agcgggccga cgcgtggcgc ctcctccggc ggggcgagcg gcgggtggcg
     1081 gtcggcgcgc gctcggcgat cttcgcgccg gtgccggacc tcggcatcgt ggtggtggac
     1141 gaggagcacg aggccagcta caagaacggg gaggcgcccc gctaccacac ccgcgacgtc
     1201 gccgccgtcc gcgcacacct cgagggagcc tccctggtgc tggggagcgc cacgccatcg
     1261 ctcgaggcca tggcccgcgc cgaagaccgg ctccggctgc tgcgcctgcc ggagcggatc
     1321 ggcgcccgcc cgctgccgcc ggtggagatc gtggacctcc gggtcgcgcc gaaggtcacc
     1381 ggcaccggac cggtggcgtg gtcggtcgcg ctcgattccg cgatcagcga gaccctcgcc
     1441 cgccgggagc aggcgctgct gctcctcaac cgccggggct acgccgcgtt ccttcattgc
     1501 cccgactgcg gcgaggtgtg gcaatgcccc cggtgcacga tctcgctgac cgtccaccgg
     1561 gcgccggccg gcctccgctg ccactactgt ggccacgagg agccgctgcc gttcagctgc
     1621 cgcaagtgcg ccaatccggt gcagcagatg cgcggcgtgg ggacccagca gctggagcag
     1681 gtgttggccg agcgctatcc gggcgcgcgg gtggcgcgca tggacctgga cacgaccagc
     1741 accaagtggt cccatcagcg gatcctgggg acggtggagc gaggcgaggt ggacctgctg
     1801 atcggcaccc agatgatcgc gaaagggctc gactttccga acgtgacgct ggtgggagtg
     1861 gtggacgccg ataccggcct ctacctgccc gacttccgcg cggccgagcg caccttccag
     1921 ctgctcgcgc aggtggccgg cagggcgggc cggggaccca agggcggccg ggtcatcgtc
     1981 cagacccggc acccgcagca tcacgcgctg gtctgggccg cgcggcacga cgtcgagggc
     2041 ttcctccggg aggagctgga gctgcgccgc gcgccgccct acccgccgga ggtccacctg
     2101 gtgaacctgg tcgtctccag cgaggacgag gcgcgcaccg ccaatcgcac cgccgagctg
     2161 gccgactggt gcagcgcgct cgtcacgcgg cacgcgctgc cggtgacggt gctcggcccg
     2221 gcgccctgcc cgctggcacg gatcaaggat cgctggcggt ggcacgtgct gttgaagggg
     2281 ccccaggagg tgctgggaag gatcgtgcgc tacgcagcgc ggcggctgcc acggacgggc
     2341 ccgctgcgga tcgtgatcga ccgggacccg gtgtcgctgc tatgacggta aggcggtaag
     2401 gcggtaaggc ggtaaggcgg gacggcggtt cgaaggtcct gcggtaagga atgtcaccct
     2461 gagcggagcg aagggcccag gcccgcatgg tcgccttcgc tccgctcagg ctgacat
//
LOCUS       DASUYN010000385         6981 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_120033, whole genome shotgun sequence.
ACCESSION   DASUYN010000385 DASUYN010000000
VERSION     DASUYN010000385.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6981)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6981)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6981
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120033"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..574)
                     /locus_tag="VF061_07525"
     CDS             complement(<1..574)
                     /locus_tag="VF061_07525"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEX6669393.1"
                     /translation="MARRAFVAVAILVAVLPLAAAAEGVNVARFFLVLAALLAAAKLF
                     GEAAERIGQPAVLGELLAGVLLGGSVLGIVPAGGAEAELIHVLAELGVLLLLFEIGLE
                     TDLREMFRVGPAALAVALVGIVLPFALGYGYWRYAPHAASGSGDLVTAAIFIGATLTA
                     TSVGITARVLSDLGRMRTPEARIIIGAAVID"
     gene            complement(579..935)
                     /locus_tag="VF061_07530"
     CDS             complement(579..935)
                     /locus_tag="VF061_07530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669394.1"
                     /translation="MVARLRGRRGSSTLGCVFSLVLFLGSLYYGVHIGQVYLRFYRLQ
                     DAMRFQAQLAPNVDDGVIAKRLAATADSLLGQQPRFRIDRAQRRITIQTEYSDRVDLP
                     FFKHIFLLRPRAEAPL"
     gene            complement(929..1432)
                     /gene="lptE"
                     /locus_tag="VF061_07535"
     CDS             complement(929..1432)
                     /gene="lptE"
                     /locus_tag="VF061_07535"
                     /inference="COORDINATES: protein motif:HMM:NF016290.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_process: GO:0043165 - Gram-negative-bacterium-type cell
                     outer membrane assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly lipoprotein LptE"
                     /protein_id="HEX6669395.1"
                     /translation="MRLKSGFLASLSTLGLGACLYGFAGGGLPPNIKTVAVLPFDNQT
                     AEPTLTQEINTAVREAVEGRLGLRQASERQADAVVRGTITRYEPDLPVAYRDDEDAGE
                     VRVTRRLVQISVTVEILDQDGNKPLWQRSGLLLEGDYDPGQELEGRRKALEKLVTNIV
                     EGAQSQW"
     gene            complement(1398..2015)
                     /locus_tag="VF061_07540"
     CDS             complement(1398..2015)
                     /locus_tag="VF061_07540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669396.1"
                     /translation="MIPVSAGPVTSAQVAEWVGGTHPSAHRLHRFKWLFRDDKSSAGG
                     RGSARIAPPDSMRFDVAGPFGSGAASAAVVGDEPLWAEPPDAVSKLVPNYPLMWGMFG
                     MARPPSPGAELRGLADGETLAWQYAEGADTIESARTAGSTTTLVTLVRRAGELIGRAE
                     TTLDSTGAPLTAKLTVPSVPARLDLTFLSTSQTDLAPEIWVSRKP"
     gene            complement(2108..4951)
                     /locus_tag="VF061_07545"
     CDS             complement(2108..4951)
                     /locus_tag="VF061_07545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669397.1"
                     /translation="MAVVSRWPLLAAAAVALGAAAPAELSAQFFSFGQNKIQYRKLDW
                     RILRGPHVDLYYYPAEADLAPAALAWAEASYDTLAVQFGHDVAERIPLVVYASHTDFE
                     QTNILPFTPPEGLLGATDFLKRRVSLPFRGNFAEFRHTLRHELVHVFQLDLLSEAYLQ
                     APRHSRFDFPLWWTEGLAELWSSGQDARDEMVMRDLTLSGRLPALRQLTWVTSGIVYP
                     LGGQIQRWLADTYGDWRVATMYKEQNRHDSFEAAVQAVYGRSLDQLSNEFQLAMRRRY
                     YPSVDSLAPLTVLGREVAKLAVKPTFLADTNGGSGGVVYVSPATGYVTIYRRGIDSGH
                     VRTVVTGGRSAEMESFHPFDSKMDASRPGLLLFVARHGDRDALVIWDLERGKVRGRYQ
                     FPELVSLLSPHWMPDGQSIVLSGLSERGISDLYRVHLPEGTLEPLTSDRYQDLDPTPG
                     PDGRRIVFASDRAADGLEGAANLFLLNLDSARVFPLTAGAWKDESPDWAGDGRIYFTS
                     DRDGVLNVFSVDTLGTGRRETSAWTGAFDGVPLPDGSGLLVGGFHDLSWNLYRYPVDT
                     LARQERFSLARPDTVANWTWLAAGDTAGSVTASREPYRSRMTLDFAAGDAVIIPGYGG
                     AQGAYFVMSDLLGDNLLFGSLGSFQGRRLGSILSNINASAVYLNRSRRVNWGLGAFRT
                     KGRNFEGDRFVAYEETAYGALGLLRYPLSRFSRVEGTFVVEHSDRVDFSLPVDEPRRV
                     GWIASHFLGYVHDNSLWVNSGPIDGGRFSLTAGLSNDFSNSRFDSYLVSADWRRYFRL
                     GRRTAWALRGYGFYSGGDRPRRTNIGGTLALRGYPQFGYIVGSRAWMANQELRLPLLT
                     HLTLGTPLGDLDLPEIQGAFFTDVGKADFQSDIDRDVIGSYGISFRLALGPLAVLRLD
                     VGRRFSSDDFRGYGLARDQRDAGFVSFFFGHNY"
     gene            complement(4959..>6981)
                     /locus_tag="VF061_07550"
     CDS             complement(4959..>6981)
                     /locus_tag="VF061_07550"
                     /inference="COORDINATES: protein motif:HMM:NF012387.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HEX6669398.1"
                     /translation="FPLALAAGLVLAAVPTRVPAQQEAVVEQVASVLAAEDARNFQPA
                     LFGSAVVSPDSLVRRLAALGAGRIGDRRATSLVVPLLTDPDSTVRVAAAFALGLLRDP
                     AGARPLMERITGVPALDGPTAVEAVTALAKIGGREAGSFFEGLLGGSVVPTVEDRRPL
                     GHQAVLESWRLGADAPVVSLLPFLEDTAVAVRWRAAYALGRLRAPAAANRLTLALRDP
                     ESIVRAMAARALTRSYVDTAGLAPRAVSELLTRAASDANIQVKINALRSLASFEDSTL
                     AAEIVPLLDDPFPNVQVQAAMTAGELGGAEAARALARVAAASRPFGVRREALVGLARA
                     DSAAFTAAAARWRSSTDWRERAAAAEGTAVAGPGERPWFLSDRDSRVVAAGLQAWTSE
                     REAADPALVAAARPLAQHPDAAVRSIAADVLGRAAKPEDLTVLVAAYRRTGRDSFPDA
                     ALAALGAIQAIGGASAEARTRVAQEFVSSAQRPEDYLVRRWAEENWPELAARWGRAAP
                     ITTGRSAQDYRDLVRRFLVAGDSAARPRIVIETDQRGPVEVELLGPEAPMTVANFVRL
                     VQRRFFDGNRWHRVVPNFVVQDGDPRGDGFGGPGGAIRDEINRHRYDGPMLGMALSGP
                     DTGSSQWFINLSPQPHLDGTYTVFGRVTAGLASLARITQGDLIRTIRMK"
BASE COUNT         1070 a         2425 c         2573 g          913 t
ORIGIN      
        1 cgtcgatcac cgcggccccg atgatgatcc gcgcctcggg tgtgcgcatc cggccgagat
       61 cggacaggac ccgggcggtg atgccgaccg aggtggcggt gagggtcgcg ccgatgaaga
      121 tggccgcggt gacgaggtcg ccgctgccgg aggccgcgtg cggggcgtag cgccagtagc
      181 cataccccaa ggcgaacggc aggacgatgc ccacgagggc gacggccagc gcggcggggc
      241 cgacgcggaa catctcccga aggtcggtct ccagcccgat ctcgaacagg agcaggagga
      301 cgcccagctc ggccagcacg tggatcagct cggcctcggc gccgccggcg gggacgatac
      361 cgagcacgct cccgccgagg agcacccccg ccagcagctc gcccagcacc gccggctgcc
      421 cgatgcgctc cgcggcctct ccgaacagct tcgcggcggc gagaagggcg gccagcacga
      481 ggaagaaacg cgcgacgttc acgccctcgg ccgcggcggc gagggggagg acggcgacca
      541 ggatggcgac ggcgacgaag gcgcgccggg ccacccgcct agagtggtgc ttcggcgcgg
      601 gggcggagga ggaagatgtg cttgaagaat ggaagatcga cacgatcgct gtattcggtc
      661 tgaatggtga tccgcctctg ggcccggtcg atccggaagc ggggctgctg gccgagcagg
      721 gagtcggccg tcgccgcgag tctcttggcg atcacgccgt cgtccacgtt cggagcgagc
      781 tgagcctgga agcgcatcgc gtcctggagc cgatagaacc gaaggtacac ctggccgatg
      841 tgcacgccat agtagagcga gccgaggaac agcaccaggg agaacacaca ccccagggtg
      901 ctgctcccgc ggcgtccgcg caggcgcgct accattgcga ctgggcaccc tccacgatgt
      961 tggtcaccag cttctccagc gcctttcgcc ggccttcgag ctcctggccg gggtcgtagt
     1021 cgccctccag cagcagcccg ctccgctgcc acagcggttt gttgccatcc tgatcgagga
     1081 tctccaccgt gacgctgatc tgcacgagcc ggcgggtgac gcgcacttcc cccgcgtcct
     1141 cgtcgtcccg gtaggcgacc ggcaggtcgg gctcgtagcg ggtgatggtc ccccgcacaa
     1201 cggcgtcggc ctggcgctcg ctcgcctgcc ggagccccag ccgcccctcc acggcctccc
     1261 gcaccgccgt attgatctcc tgggtgaggg tcggctcggc ggtctgattg tcgaacggga
     1321 ggaccgccac cgtcttgatg ttcggcggca ggcctccgcc ggcgaagccg tagaggcagg
     1381 cgccgaggcc gagggtgcta aggcttgcga gaaacccaga tttcaggcgc aaggtcggtc
     1441 tgcgaagtcg agaggaaggt gaggtccagt cgagccggca cgctcgggac cgtgagcttg
     1501 gccgtgagcg gcgcgccggt cgaatccagc gtcgtctccg cgcgcccgat gagctctccg
     1561 gcccggcgca ccagggtcac cagcgtcgtg gtgctgcccg cggtgcgggc ggactcgatg
     1621 gtgtcggcgc cttcggcata ctgccacgcg agtgtctcgc cgtcggccag accccggagc
     1681 tcggcgccgg gcgagggcgg gcgcgccatg ccgaacatcc cccacatcag cgggtagttc
     1741 ggcaccagct tgctcaccgc gtcgggcggc tcggcccaga gcggctcgtc gccgaccacc
     1801 gcggcggagg cggcgccgga cccgaacggc ccggcgacgt cgaagcgcat cgagtcgggc
     1861 ggcgcgatgc gggcgctgcc ccgccctccc gcgctcgact tgtcgtcacg gaacaaccac
     1921 ttgaaccggt ggagccggtg cgccgatggg tgggtgccgc cgacccactc ggccacctgg
     1981 gctgaagtta ccgggccggc cgagaccggg atcacggagc cgggcgcacc ggcacacgcc
     2041 agcccggcca acgccaagcc aagatatgcg agccgcgctg gccggtcaat cagaaggcgt
     2101 tgcgccatca atagttatgg ccgaagaaga agctcacgaa cccggcgtcg cgctggtcgc
     2161 gggccaggcc gtacccccgg aagtcgtcac tgctgaagcg tcggccgacg tcgaggcgga
     2221 gcaccgccag cgggccgagc gccagccgaa agctaatccc gtagctgccg atcacgtcgc
     2281 ggtcgatgtc ggactggaag tcggccttgc ccacgtcggt gaagaaggcc ccctggatct
     2341 cggggagatc gaggtcgccg agcggcgtgc cgagcgtgag atgggtgagc agcgggaggc
     2401 gcagctcctg gttggccatc caggcacggg accccacgat gtagccgaac tgcggatagc
     2461 cccgcagcgc cagggtcccg ccgatgttgg tgcggcgggg ccggtcgccg ccgctgtaga
     2521 agccgtagcc gcgaagggcc caggcggtcc gccgccccag gcggaagtag cgtcgccaat
     2581 cggcgctcac caggtagctg tcgaaccggc tgttgctgaa gtcgttggag aggccggcgg
     2641 tgagactgaa gcgcccgcca tcgatcgggc cgctgttcac ccagagcgaa ttgtcgtgga
     2701 cgtagcccag gaagtgcgac gcgatccagc ccacccgccg gggctcgtcc acggggaggc
     2761 tgaaatccac ccggtccgaa tgctcgacga cgaaggtgcc ctccacccgg ctgaagcggc
     2821 tgagcgggta tcgcagcagc ccgagcgcgc cgtacgcggt ctcctcgtag gcgacgaacc
     2881 ggtcaccctc gaagttgcga cccttggtgc ggaacgcgcc gaggccccag ttcacccggc
     2941 gggaccgatt cagatagacg gcactcgcgt tgatgttgga gaggatgctc ccgagccgcc
     3001 ggccctggaa ggagccgagc gagccgaaga ggaggttgtc gccgagcagg tcgctcatga
     3061 cgaagtacgc accctgcgca cccccgtagc cggggatgat gacggcgtct ccggcggcga
     3121 agtcgagcgt catgcgggag cgatacggct cccggctggc ggtgacgctg ccggcggtgt
     3181 cgccggcggc gagccaggtc cagttggcca cggtgtcggg tcgcgcgagc gagaagcgtt
     3241 cctggcgcgc gagcgtgtcc accgggtagc ggtagaggtt ccagctcagg tcgtggaagc
     3301 cccccaccag gagccccgag ccgtcgggga gcggcacgcc gtcgaaggcc ccggtccagg
     3361 cggaggtctc ccggcgtccc gtgcccagcg tgtccaccga gaacacattg agcaccccgt
     3421 cgcggtctga ggtgaagtag atccggccat cgccggccca gtccggcgac tcgtccttcc
     3481 atgcgcccgc cgtgaggggg aagacgcggg cactgtccag gttcaggagg aagagattcg
     3541 cggcgccctc gaggccgtcc gcggcgcgat cggaggcgaa gacgatgcgc cgcccgtcag
     3601 ggccgggtgt cgggtcgagg tcctggtagc ggtcggaagt gagcggctcc agcgtcccct
     3661 cgggcaggtg cacccggtag aggtcggaaa tcccccgctc ggacaacccg ctcagcacga
     3721 tactctgtcc gtccggcatc cagtggggcg acagcagcga caccagctcg gggaactggt
     3781 agcggccccg gaccttgccg cgctcgagat cccagatcac gagcgcatcg cggtcgccgt
     3841 gccgggcgac gaacagcagc aacccgggcc gggaggcgtc catcttggaa tcgaagggat
     3901 ggaacgattc catctccgcg ctgcggcctc cggtcaccac ggtgcggacg tggccgctgt
     3961 cgatgccccg gcgatagatg gtgacgtagc ccgtggccgg ggacacgtac accacgccgc
     4021 ccgacccgcc attggtatcg gccaggaagg tcggcttgac cgccagcttg gccacctccc
     4081 ggccgaggac ggtgagcggg gcgagactgt ccaccgaggg gtagtagcgc cggcgcatgg
     4141 ccagctggaa ttcgttgctc agctggtcca gcgaccggcc gtacaccgcc tggaccgcgg
     4201 cctcgaagct gtcgtgccgg ttctgctcct tgtacatggt ggcgacgcgc cagtcgccgt
     4261 aggtgtcggc gagccagcgc tggatctgcc ctcccagggg atacacgatg ccgctggtga
     4321 cccaggtgag ctgccggagc gcgggcagcc ggccgctcag cgtgaggtcg cgcatcacca
     4381 tctcgtcgcg agcgtcctgg cccgacgacc agagctcggc cagcccttcg gtccaccaga
     4441 gcgggaagtc gaagcggctg tgccgcggcg cctggagata ggcctcgctc agaaggtcga
     4501 gctgaaagac gtggaccagc tcgtgccgga gcgtgtgccg gaactcggcg aaattgccgc
     4561 ggaaggggag cgagacccgg cgcttcagga agtcggtggc gcccagcagc ccttccggcg
     4621 gggtgaacgg caggatgttg gtctgctcga aatcagtgtg cgacgcgtag accaccagcg
     4681 ggatccgctc cgccacgtcg tggccgaact gcaccgccag ggtgtcgtag ctggcctccg
     4741 cccaggcgag cgcggcgggc gccaggtcgg cctccgccgg gtagtaatag agatccacgt
     4801 gcgggccgcg gaggatccgc cagtcgagct tgcggtactg gatcttgttc tggccgaagc
     4861 tgaagaactg cgcggaaagc tcggcggggg cggccgcgcc cagcgcgacc gccgcggccg
     4921 cgaggagcgg ccacctgctc acgactgcca tgtccccctc acttcatcct gatcgtgcgg
     4981 atcaggtctc cctgcgttat tcgtgcgagg ctcgccagcc cggcggtgac acggccgaac
     5041 accgtgtacg tcccgtcgag gtgaggctgc gggctgagat tgatgaacca ttggctcgac
     5101 ccggtgtccg ggccggacag cgccatgccg agcatggggc cgtcgtaccg gtgacgattg
     5161 atctcgtccc ggatcgcacc accggggccg ccgaacccgt cgccgcgggg atcgccgtcc
     5221 tgcaccacga agttcggcac cacccggtgc cagcggttgc cgtcgaagaa gcggcgctgg
     5281 accaggcgaa caaagttggc gaccgtcatc ggcgcctcgg ggccaagcaa ctcgacctcc
     5341 accggccctc gctggtcggt ctcgatgacg atcctgggcc gcgcggccga gtcgccggcc
     5401 acgaggaacc ggcgcaccag gtcccgataa tcctgggcgc tccggcccgt cgtgatcggc
     5461 gcggcccggc cccaccgcgc cgccagctcg ggccagttct cctcggccca ccggcggacc
     5521 aggtaatcct ccggtcgctg cgccgaggag acgaactcct gcgccaccct ggttctcgcc
     5581 tccgccgagg cgccgccgat ggcctggatc gcgcccagcg cggcgagggc ggcatcggga
     5641 aaggagtccc ggccggtccg gcggtaggcg gccacgagca ccgtcaggtc ttccggcttc
     5701 gccgcccggc cgagcacgtc cgccgcgatg ctgcgcacgg cggcgtccgg gtgctgcgcc
     5761 agcgggcggg cggccgcgac cagcgccggg tcggcggcct cgcgctccga ggtccacgcc
     5821 tggaggcccg cggccacgac cctggagtcg cgatcggaga ggaaccaggg tcgctcgccg
     5881 ggcccggcca cggcggtgcc ctcggccgcg gcggcgcgct ccctccagtc ggtgctgctc
     5941 cgccagcggg ccgccgcggc ggtgaacgcg gcgctgtcgg cgcgggccaa cccgaccagg
     6001 gcttcgcggc gcacgccgaa gggtcggctc gccgccgcga cgcgcgcgag cgcgcgggca
     6061 gcttcggcac cgcccagctc gccggcggtc atggcggcct gcacctggac gttggggaac
     6121 gggtcgtcga ggagcgggac gatctccgcc gccagggtgg agtcctcgaa gctcgccagg
     6181 gagcgcagcg cgttgatctt gacctggatg ttggcgtcgg aggccgcacg ggtcagcagc
     6241 tcgctgacgg cgcggggcgc gagtcccgcc gtgtccacgt agctccgggt gagcgcgcgc
     6301 gccgccatgg cgcgcacgat ggactcgggg tcgcggagcg cgagggtcag gcggttggcc
     6361 gcggcgggcg cccgcagccg gcccagggcg tacgcggcgc gccagcggac ggcgacggct
     6421 gtgtcctcca ggaacgggag gagggacacc accggggcgt cggcgccgag acgccaggac
     6481 tccagcacgg cttggtgccc cagcgggcgg cggtcctcca ccgtcggcac cacgctgccg
     6541 ccgagcagcc cttcgaagaa gctgccggcc tcacgtccac cgatcttcgc gagcgcggtg
     6601 acggcctcca ccgcggtcgg gccatcgagc gcgggcaccc cggtaatccg ctccatgagc
     6661 gggcgcgcac cggccgggtc ccggagcagg ccgagggcga acgccgcggc cacccggacc
     6721 gtggagtcgg gatcggtgag cagcggcacg accagcgacg tcgcccggcg gtcgccgatt
     6781 cggcccgcgc ccagggcggc cagccggcgg accagcgagt cgggtgagac caccgcgctg
     6841 ccgaagagcg cgggctggaa gttcctggcg tcctccgcgg cgagcaccga ggcgacctgc
     6901 tcgaccaccg cctcctgctg ggccgggacg cgggtcggca cggcggcgag gacgagcccg
     6961 gccgcgaggg cgaggggaaa g
//
LOCUS       DASUYN010000386         3162 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_120044, whole genome shotgun sequence.
ACCESSION   DASUYN010000386 DASUYN010000000
VERSION     DASUYN010000386.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3162)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3162)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3162
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120044"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..277
                     /locus_tag="VF061_07555"
     CDS             <1..277
                     /locus_tag="VF061_07555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669399.1"
                     /translation="TAIVGGRVAFSVDPRAGPVQWDSGGVVHLVELGETGALVLDTPG
                     RLYRRPALSPDGTRIVAEGYPLIITGPPSAPDTTVSKSGDLYLFGGE"
     gene            389..583
                     /locus_tag="VF061_07560"
                     /pseudo
     CDS             389..583
                     /locus_tag="VF061_07560"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
     gene            1619..3055
                     /locus_tag="VF061_07565"
     CDS             1619..3055
                     /locus_tag="VF061_07565"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX6669400.1"
                     /translation="MPAFFLGSGSRGELAWNRFGETRVQLDGTIGGVQGFDLYAGGEY
                     VAQQVRTFQRPLGFLPAGDTVPAPARSAFSPRSAAAYAEGQLRIADVAVTAGLRYDRF
                     DPGSSLPGEARGAQSSVSPRFAVSTVLSGATLIASYGRFSQAPDYQFLVDAAFDDTTR
                     TGRFRRGNPNLGFEKASQYELSLRVRPKEELTLRVGVYYKRLTGLVASVPLGVNPDST
                     IFGNSDAGTVRGAELLFERELQDGFGFRLAYTLQEAEATATDPFLLNRLIVVDPITGD
                     TNRPARAEFPLDFDQRHTLTAIARGQVPEGVGPSVAGVRPLAGLEGAVILRLASGLPY
                     SLSDSTGDSLVGLPNGSRLPNTSSLDVLIRRSLKLAGTTGGIYLDIRNVLNRRNVVAV
                     RRDTGEPAADEAAIQRMAEAAYAANPSPIPYESGRYRSEADLNGDGFVAGREELFPMY
                     VAAATDYAQPIFAYGTPRLARLGVEVLF"
BASE COUNT          417 a         1138 c         1139 g          468 t
ORIGIN      
        1 gaccgcgatc gtcggcgggc gggtcgcatt ctccgtggat ccgcgcgcgg gtccggtgca
       61 gtgggacagc ggtggcgtcg tgcacttggt cgagctgggc gagacgggag ccctggtgct
      121 cgacacgccg ggccggctct accggcggcc ggcgctctcg cccgacggca cccggatcgt
      181 ggcggagggg tatccgctga tcatcacggg tccgccctcg gctcccgaca ccacggtgag
      241 caagagcggt gatctctatc tgttcggagg cgagtgatga cccggacgcc gctcctcgcc
      301 gcgctcgccg tcggcatcgc ttcgctcgcg tccgtctcgg gcgcggcggc ccaggcggag
      361 ggcgccgtcg ccggaggttc gccagtcgga atcgggagcc ggcctcggtg gcgcccaggt
      421 gctggtggac gaccgggtcg gcggggtggc ggataccgcc ggccgctacc gggtgcgcgc
      481 ggtgcgcacc ggctggcacc ggatctccgc gcgacagatc ggctaccgcg gcgtcgtcct
      541 cgacagcgtg ttcgtccccg ccggggccac ggtgacggtg gacttcgacc tggaggccaa
      601 tccgctcgag ctcgagccgc tggtggtgac cgcgccctac gatgcggtcc tcgatccgct
      661 ggccacgagc accgagcaga agatcagcgc cgaagacctg cgcgacctgc cgatcagtac
      721 gctggaggag gcgctggcgc tgtccgccgg cagcgtcggc agcagctacc ggggcggccg
      781 gatcggccag gagtcgttca ttctcgacgg gctcggcgtg aagaaccagc tcgacgcctc
      841 cagcggcggg ctgggcctcc agatcccgcc cgacctgctc agcgaggcgt ccctggtgac
      901 gaacgggttc tccgcccgct tcggccaggc gctctccggc ctggtgaacg tggtgacccg
      961 ggagccgggc gagcgctggg aggggcgcct ggcctacgag ggagatcggc cgttcggtgg
     1021 gtccctcgat cgcggtctcg accggctcgt cgtccgcgcc ggcgggccac tcgccggtcg
     1081 gctcggcctg gtgaccgccc tcgacgtctc ggggcggctg gatgccgatc cggtgagtgc
     1141 cccgcccccg ccgaacggcc tggacccgcg gagcggcacg ccctatccgc tgccgcacaa
     1201 cagcggagag cagtggaccg gcgcggccaa gctggtcgtt cccgtcaccg agcgggccac
     1261 cttccgcgcg ctcggactcc attccgagga ccagcggctg ctctacgatc ccgcctacaa
     1321 gtacgatccc gagtacgggc ccgcgcagcg gctgcgcggc gatctggtga gcgggcatct
     1381 ccagtacacc agcgacccac gctccggcct cccgctggtg atcgatctcc gggcgggccg
     1441 ctacgtgcgg gagttcctgc gcggcgagct ggtcgagcag ccggacttcg cggtcggggc
     1501 cctgaccggc tcccggttcc acttcatcgg cgaggacctg gcgaagaacc tctccggctc
     1561 gaccgcgccg ataccgggac tccgcgagcc cgacgccagc gtgcgctcgc cctggggcgt
     1621 gccggcgttt ttcctgggga gcggctcgcg cggggagctg gcctggaacc gtttcggcga
     1681 aacccgcgtc cagctcgacg ggaccatcgg cggggtccag ggattcgacc tgtacgccgg
     1741 cggcgaatac gtcgcccagc aggtccgcac gttccagcgc ccgttaggct tcctccccgc
     1801 gggcgatacg gtgcccgctc cggcacgctc ggccttctcc ccccggagcg ccgccgccta
     1861 cgccgagggg cagctgcgga tcgcggatgt ggcggtcacc gcggggctgc gctacgaccg
     1921 cttcgacccg gggagcagtc ttcccggcga ggcgcgcggc gcgcagagct cggtgagccc
     1981 gcgattcgcg gtgagcacgg tgctgagcgg cgccaccctg atcgcgagct acggccgatt
     2041 cagccaggcg ccggactacc agttcctggt ggacgcggcg ttcgacgaca cgacccgcac
     2101 cggccgcttc cgccggggca atcccaacct cggcttcgag aaggcgagcc agtacgagct
     2161 gagcctcagg gtgcggccga aggaggagct gacgctccgg gtgggggtct actacaagcg
     2221 gctcaccggt ctggtcgcct cggtgccgct gggggtgaac cccgactcga ccatcttcgg
     2281 caactccgac gccggcacgg tccgaggggc cgagctgctg ttcgagcggg aactgcagga
     2341 cgggttcggc ttccgactgg cttacaccct ccaggaggcc gaggccaccg cgaccgaccc
     2401 gttcctgttg aaccgcctca tcgtggtgga tcccatcacc ggtgacacca accggccggc
     2461 gcgagccgag tttccgctcg acttcgacca gcggcacacg ctcaccgcca tcgcccgggg
     2521 ccaggtgccg gagggcgtcg gcccgtccgt ggccggcgtg cgtccgctcg ccgggctcga
     2581 aggcgcggtg atcctgcggc tcgcttcggg gctcccctac tccctgagtg acagcaccgg
     2641 cgactcgctg gtgggcctgc cgaacggatc gcgactgccc aacacctcgt cgctcgatgt
     2701 cctgatccgg cgctcgctca agctcgccgg caccaccggt ggtatctacc tcgacatccg
     2761 caacgtgctc aaccgccgca acgtggtcgc cgtgcggcgg gacaccggcg agcccgcggc
     2821 ggacgaggcc gcgatccagc ggatggcgga ggcggcctac gcggccaacc cctcgccgat
     2881 tccctacgaa tcaggacgct atcgctcgga ggcggacctg aacggcgacg ggttcgtggc
     2941 gggccgggag gagctgttcc cgatgtatgt cgccgcggcg accgattacg cccaaccgat
     3001 tttcgcctac ggcactccgc ggctcgcgcg gctgggggtg gaggtgctct tctgagacgt
     3061 gcgacgcctg ccacgcagcg gcacgctcgc ggcgctcgtt gaagcggtgc gatggccagg
     3121 atttcggcga ccgtagtcgc gcaagcgctc ggcacctgtg gc
//
LOCUS       DASUYN010000387         2501 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1004297, whole genome shotgun sequence.
ACCESSION   DASUYN010000387 DASUYN010000000
VERSION     DASUYN010000387.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2501)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2501)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2501
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1004297"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..256)
                     /locus_tag="VF061_07570"
     CDS             complement(<1..256)
                     /locus_tag="VF061_07570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669401.1"
                     /translation="MPRILMVLTSHDRLGDTGRKTGFWLEEFAAPYYVLRDAGAEITL
                     ASPQGGQPPIDPKSDEPGAETGAMKRFRSDPDAQRALANTV"
     gene            complement(329..1747)
                     /locus_tag="VF061_07575"
     CDS             complement(329..1747)
                     /locus_tag="VF061_07575"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX6669402.1"
                     /translation="MREGCAVLAILVASLSSTLQAQQSTAAPGTAPFIAIPSGLVAIT
                     HVQLVDGSGTPPSPDHTVILRGDRIEAVGPSADLAVPPGARVLDLRGHTVLPGLVGLH
                     EHTYYGGVERFTDMRVSAPLLYLALGVTTAMTAGSRSPEVELELKRRVDQGDIPGPRF
                     HVSGPYLDIAGGGPVNRVAVTTPEEARRVVAEWAARGATWFKFLGGASREVMGAAIEA
                     AHARGLKVTGHLCSVTFSEAAALGMDALQHGFITNSDYVPGKRPDECPPGNMKVQADV
                     DLGSPAVRESIRRIVAGGSAVVSTLGVYETFDPDRARLDPDAMAMLAPATRREVEENH
                     AHMAARGFTVPTRLLKRMMQWERMFVAAGGVLGAGSDPWGTGYLPGFGNLRNYELLVE
                     AGFSAEQAVQIMTLNGARILGVDRELGSIAPGKLADLVVVRGDPIRAPGEIYRVVTVF
                     KGGVGYDSDRLRTAARGKVGVE"
     gene            complement(1749..2366)
                     /locus_tag="VF061_07580"
     CDS             complement(1749..2366)
                     /locus_tag="VF061_07580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669403.1"
                     /translation="MIDADGSGRRQLTDDPESESGPAWSPDGDSLMFGRNGALTVMAA
                     DGSGRREVVLDAGRAAGGGRWSPDGRRIAFYGYGEQPAGIYMMDPDGRNVSRVDQVCD
                     LPSGVDCSDSDPRWSPDGEHVAFMRFHAGGRTAGGIMRADGSMSQLLLPTLHTGPAVW
                     SPDGERVALTRWDPEEGYSLYLVTVATGDTLRLPTTDAFASDWAP"
BASE COUNT          366 a          891 c          862 g          382 t
ORIGIN      
        1 tcacggtatt ggcgagcgcc cgctgcgcgt cgggatcgct ccggaaccgc ttcatcgcgc
       61 cggtctcggc accgggctca tcgctcttgg gatcgatggg aggctggccg ccctgcggcg
      121 aagccagcgt gatctcggcc ccggcgtcgc gcagcacgta atatggcgcg gcgaattcct
      181 ccagccagaa gccggtcttc cggccggtgt cgccgaggcg gtcgtgggag gtgagaacca
      241 tcaggatcct gggcatgctc gactccgctg caagtgttgg taaccagtga ccttcccgtc
      301 aaaggtagca ccgggacgag gtgattcctt actcgactcc gaccttgccc cgcgccgccg
      361 ttcgcagccg gtcggagtcg taccctaccc cgcccttgaa gaccgtcacc acccggtaga
      421 tctctccggg cgcgcggatc ggatcgcccc ggacgaccac gaggtcggcc agcttccccg
      481 gggcgatcga gcccagctcg cggtccacgc cgaggatccg cgccccgttc aaggtcatga
      541 tctggaccgc ctgctcggcg ctgaagcccg cctcgaccag cagctcgtag ttccgcaggt
      601 tgccgaaccc gggcaggtaa ccggttcccc atgggtcgga ccctgccccg agcacgccgc
      661 ccgcggccac gaacatccgc tcccactgca tcatcctctt cagcaggcgg gtcggcaccg
      721 tgaagccgcg cgccgccatg tgcgcgtggt tctcctcgac ctcacggcgg gtggccggcg
      781 ccagcatcgc catggcgtcg ggatcgagac gcgctcggtc gggatcgaag gtctcgtaca
      841 cgccgagggt ggagaccacg gccgagccgc cggccacgat cctgcggatg ctctcgcgca
      901 ccgccgggct cccgaggtcc acgtcggcct gaaccttcat gttgcccggc gggcactcgt
      961 ccgggcgctt gcccggcacg tagtcgctgt tggtgatgaa gccgtgctgg agcgcgtcca
     1021 tgccgagggc ggcggcttcg ctgaaggtga cggagcagag gtggccggtg accttgaggc
     1081 cgcgcgcgtg ggccgcctcg atcgccgcgc ccatcacctc gcgcgacgcg ccgcccagga
     1141 acttgaacca ggtggccccg cgtgccgccc actcggccac cacgcgccgc gcctcttccg
     1201 gcgtggtcac ggccacgcgg ttgaccgggc cgccgcccgc gatgtccagg taagggccgg
     1261 agacgtggaa gcgcggaccg gggatgtcgc cctggtctac cctgcgcttc aactccagct
     1321 cgacctcggg cgagcggctg ccggccgtca tcgccgtggt gacgccgagg gcgaggtaga
     1381 ggagcggcgc ggacacccgc atgtcggtga accgttccac gccgccatag taggtgtgct
     1441 cgtgcagccc gaccaggccg gggagcacgg tgtggccgcg gaggtcgagg actcgcgcgc
     1501 cgggcggtac tgcgaggtcc gccgacggcc ctacggcctc gatgcggtcg cctctcagga
     1561 tcaccgtgtg gtcagggctc ggcggcgttc cgctcccgtc gaccagttgt acgtgcgtga
     1621 tcgcgacgag gccactgggg atggcgatga acggcgctgt gccgggagca gcggtggatt
     1681 gctgggcctg gagcgtggag gaaaggctcg cgaccaggat cgcgaggacc gcgcatccct
     1741 cgcgcacttt acggagccca gtcgctcgcg aaggcgtcgg tggtcggcaa ccgaagtgta
     1801 tcccccgtgg ctacggtgac gaggtagagg ctgtagccct cctccggatc ccaccgggtc
     1861 agcgccacac gctcgccatc gggcgaccac accgcggggc cggtgtgcag cgtggggagt
     1921 aggagctggg acatgctgcc gtccgcgcgc atgatcccgc cggcggtccg gcctccggca
     1981 tgaaatcgca tgaaggcgac gtgctccccg tccggggacc agcgtgggtc cgaatcgctg
     2041 cagtccacgc cggaggggag gtcgcagacc tggtccaccc gggaaacgtt ccggccgtca
     2101 gggtccatca tgtagatgcc cgccggttgc tcaccgtacc cgtagaacgc gatccgccgg
     2161 ccgtccggtg accaacgtcc gccgccggca gcgcggccgg catccagcac cacctcccgt
     2221 cgaccgctcc cgtcggcagc catgactgta agcgccccgt tccggccgaa catcagactg
     2281 tccccgtcgg gcgaccacgc cggccccgac tcggactccg ggtcgtccgt cagctgccgc
     2341 cgccccgagc cgtcggcatc gatcacatag atgtcccaat gcccgccctg aaagccgctg
     2401 aatgcgatcc ggcggccatc cggcgagacg gagcggcatc atagccctta ggctggctgc
     2461 gccgtgacgg cagctcggtc gttaagtgct ttgaagtggg g
//
LOCUS       DASUYN010000388         2397 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1004451, whole genome shotgun sequence.
ACCESSION   DASUYN010000388 DASUYN010000000
VERSION     DASUYN010000388.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2397)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2397)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2397
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1004451"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1540)
                     /gene="rny"
                     /locus_tag="VF061_07585"
     CDS             complement(<1..1540)
                     /gene="rny"
                     /locus_tag="VF061_07585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004521 - RNA endonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Y"
                     /protein_id="HEX6669404.1"
                     /translation="MSQSLLLPVLAGVAAGLVVALVFIAVYTRRQRESASGIVAAART
                     EAERLRTDSARQAEAARTEALVAAKMETLKLREDLEREMQRRREEFERLELRAEERSR
                     AHDRKLEEIESRERGFAGREESLRQREQALKAREGEADRLAQEQRARLERIAGLTAED
                     ARREILQRVEDEARGQAAALVRDIKEQARKGADREARRIISIAIQRLAAEHTAESTVA
                     AVALPSDEMKGRIIGREGRNIRAFETATGVDVIIDDTPDTVIISCFDPIRREVARRAL
                     DALIQDGRIHPGRIEEVVVKVQKELEGQLVELGEQAAYDTGLHGLHPELIKLVGRMRY
                     RTSYGQNIYDHSKEVAWLAGMMAAELHLDVQLAKRGGLLHDVGKVLTHDAEGTHVELG
                     VEVARRYGESAAVINCIQAHHDDVPHESAESVLVQAADAISGSRPGARREAFETYVKR
                     LTRLEEIAAGFPGVEKCNVIQAGREVRVVVTPDRIDDGAAATLSETIARKIENELQYP
                     GQIKV"
     gene            complement(1815..2123)
                     /locus_tag="VF061_07590"
     CDS             complement(1815..2123)
                     /locus_tag="VF061_07590"
                     /inference="COORDINATES: protein motif:HMM:NF017016.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000917 - division septum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HEX6669405.1"
                     /translation="MSQPKNAVRVIIGGEEFTVRSELPPEYTREVAAYLDAALKRVRD
                     SMPMVETHKAAILAALAITDELFQARRGDREIAGRLNGMADDLARLLPPAKRGRRAAS
                     "
     gene            complement(2120..>2397)
                     /locus_tag="VF061_07595"
     CDS             complement(2120..>2397)
                     /locus_tag="VF061_07595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669406.1"
                     /translation="LNELDQLLRHVADELAGWRRRTLRAEAELAEARASGGVLAGPEL
                     KEARQRVVELETENQALRQRIDAAKERLRVLAARLSFLEQHGGGTAA"
BASE COUNT          283 a          925 c          808 g          381 t
ORIGIN      
        1 cgaccttgat ctgccccgga tactggagct cgttctcgat cttgcgggcg atggtctcgg
       61 agagcgtcgc ggccgcgccg tcgtcgatcc ggtccggcgt caccaccacc cgcacctcgc
      121 gtcccgcctg aatcacgttg cacttctcca ccccggggaa tccggcggcg atctcctcca
      181 gccgggtgag ccgcttgacg taggtctcga acgcctcgcg ccgggccccg ggccgcgagc
      241 cgctgatggc atcggccgcc tgcaccagca ccgactccgc cgattcgtgc ggcacgtcgt
      301 cgtggtgcgc ctggatgcag ttgatcaccg ccgcgctctc gccgtaccgc cgggcgacct
      361 cgacccccag ctcgacgtgg gtgccctcgg cgtcgtgggt cagcaccttc cccacgtcgt
      421 gcagcaggcc gccccgcttg gccagctgca cgtcgaggtg cagctcggcc gccatcatcc
      481 ccgccagcca cgccacttcc ttcgagtggt cgtagatgtt ctgaccgtag gaggtgcggt
      541 agcgcatccg gccgaccagc ttgatcagct cggggtggag gccgtggagc ccggtgtcgt
      601 aggccgcctg ctcgcccagc tccaccagct gcccctccag ctccttttgt accttcacca
      661 ccacctcttc gatccgtccg gggtggatcc gcccgtcctg gatcagcgcg tcgagcgccc
      721 gccgggccac ctcgcggcgg atcgggtcga agcaggagat gatcaccgtg tcgggcgtgt
      781 cgtcgatgat cacatccacg ccggtggcgg tctcgaaggc gcggatgttc cgcccctcgc
      841 ggccgatgat ccggcccttc atctcgtcgc tcgggagcgc caccgcggcc accgtgctct
      901 cggcggtgtg ctcggcggcg agccgctgga tggcgatgga gatgatccgc cgtgcctcgc
      961 ggtcggcgcc cttccgggcc tgctccttga tgtcccgcac cagggcggcc gcctggcccc
     1021 gggcctcgtc ctccacccgc tggaggatct cccgccgggc gtcctccgcc gtgagcccgg
     1081 cgatccgctc cagccgggcc cgctgctcct gggccagccg gtcggcctcg ccctcgcggg
     1141 ccttgagcgc ctgctcccgc tgccgcagcg actcctcgcg cccggcgaag ccgcgctcgc
     1201 ggctctcgat ctcctcgagc ttccggtcgt gcgcccgcga gcgctcctcc gcccgcagtt
     1261 cgagccgctc gaactcctcc cgccggcgct gcatctcccg ctcgaggtct tcccggagct
     1321 tgagggtctc catcttggcg gccaccagcg cctcggtgcg cgccgcctcg gcctgccgcg
     1381 ccgagtcggt ccggagccgc tcggcctcgg tccgcgcggc cgcgacgatc ccgctcgccg
     1441 actcccgctg gcggcgggtg tacacggcga tgaacaccaa ggcgacgaca agtccggcag
     1501 ctacccccgc gagcacgggg aggagcaggg actgactcat ccaggtctcc ggtcaggaac
     1561 gagtgactcg atcacccgcg cggacggcgg gtgcgcatcg catcagcggc ccgtcaccac
     1621 agagacacag aggccgcaga ggactccgca cgatcgcaca tcgtctcatg ccgcgtccga
     1681 gaggctccgg gccggtagcg acggcctcgg ttgccggcgt ggacgcctct tggtgcgcac
     1741 aagactcagg cggccgagcg aggatccctc tgtgtcctct gtgtcactgc ggtgaatggc
     1801 cgcacagatt cggcctacga cgccgcccgg cggccgcgct tggccggcgg gaggaggcgg
     1861 gcgaggtcgt cggccatccc gttgaggcgg ccggcgatct cgcggtcgcc gcggcgggcc
     1921 tggaacagct cgtcggtgat ggccagcgcc gcgaggatgg cggccttgtg ggtctccacc
     1981 atcggcatcg agtcgcgcac ccgcttgagc gccgcgtcga gatacgcggc cacctcccgg
     2041 gtgtactccg gcgggagctc cgagcggacg gtgaactcct cgccgccgat gatgacccgg
     2101 accgcgttct tgggctggct cacgccgcgg tgcctccgcc gtgctgctcg aggaaggaga
     2161 gccgcgccgc gagcacccgc agccgctcct tggcggcgtc gatgcgctgt cgcagcgcct
     2221 ggttctcggt ctccagctcc accacccgct ggcgcgcctc cttgagctcg ggaccggcca
     2281 ggaccccgcc gctggcgcgc gcctcggcca gctccgcctc ggcgcgcagg gtacggcgcc
     2341 gccagccggc cagctcgtcg gccacgtgcc ggaggagctg gtcgagctcg ttcagcg
//
LOCUS       DASUYN010000389         2138 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_120391, whole genome shotgun sequence.
ACCESSION   DASUYN010000389 DASUYN010000000
VERSION     DASUYN010000389.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2138)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2138)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2138
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120391"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            44..1612
                     /locus_tag="VF061_07600"
     CDS             44..1612
                     /locus_tag="VF061_07600"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEX6669407.1"
                     /translation="MTTATKITYTSAAGDLDAFHRLFDEALARVRAAAGASYPNLIGG
                     EPVAGVGDPLDDRSPIDTSVLLGRFAAAGPAEVDLAVRRAKQAQVAWGRRPWQDRLAI
                     LRRAAELIRERKYDLAALMSLEVGKSRLEAMGDAEESADLIDYYCGQVEEADGFVRPM
                     ARITPIERNTDVLRPYGTFACIAPFNFPLALSVGMSSAALMAGNAVVYKPSEEAPWTG
                     LRLAEIYRDAGLPAGLFNFLVGRREAIGDALWQHPGVDGIVFTGSKAVGLRIHAGVSG
                     RWIKPCLMELGGKNAAVVTASADLDAAAEGVMRSAFGLQNQKCSATSRVYVDRRVAEP
                     FLARLVEKTRAIRMGDPTERDVYFGPVINGAAVERFERAVAQAGGEGTIVLGGARLRG
                     GVFDKGHFVAPTIARLPLASSLYREELFVPFLAVGEVSGLDEAIAQTNDVEYGLTAGI
                     FSADPAEVARFFDEVEAGVCYANKRSGATTGAWPGAQAFCGWKGSGSTGKGGCGPYYV
                     AQFMREQNRTVIET"
     gene            1653..>2138
                     /locus_tag="VF061_07605"
     CDS             1653..>2138
                     /locus_tag="VF061_07605"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX6669408.1"
                     /translation="MRDYPKIVVPPPGPRAQAVVRRDEAWTSPCYIKEYPLVVSHGRG
                     PMVEDVDGNRFLDFMAGIAVCSTGYSHPKVVAAVKEAADRFLHICGSDFYYESMAELC
                     ERLARLAPGPSRKRVFLTNSGTEATEGAIKLARFATRRTAIIAFRGAFHGRSTGAVTL
                     TS"
BASE COUNT          309 a          737 c          788 g          304 t
ORIGIN      
        1 cccgggcgct gcaccgtgcg gcggaccggg cgggagcgaa gcgatgacga cggcaaccaa
       61 gatcacctat acctccgccg ccggcgacct ggacgcgttc catcgcctgt tcgacgaggc
      121 cctcgcacgg gttcgcgcgg ccgctggggc gagctacccc aacctgatcg gcggcgagcc
      181 ggtggccggc gtgggcgacc cgctcgacga ccgttcgccc atcgacacgt ccgtgctgct
      241 cggtcggttc gccgcggcgg gaccggcgga agtggacctg gcggtgcggc gggcgaagca
      301 ggcgcaggtg gcctggggtc ggcggccgtg gcaggatcgg ctcgccatcc tgcgtcgcgc
      361 ggccgagctc atccgggagc ggaagtacga tctcgccgcg ctgatgtccc tggaagtggg
      421 caagagccgc ctggaggcga tgggcgacgc cgaggagtcg gccgacctga tcgactacta
      481 ctgcggccag gtggaggagg ccgacggctt cgtgcggccg atggccagga tcaccccgat
      541 cgagcggaac accgacgtgc tccggcccta cggcacgttc gcctgcatcg cgccgttcaa
      601 cttccccctc gcgctctccg tcgggatgtc gtcggccgcg ctgatggcgg ggaacgcggt
      661 ggtctacaag ccctcggagg aggcgccgtg gaccggcctc cggctcgccg agatctatcg
      721 cgacgcgggc cttccggcgg gcctcttcaa cttcctcgtg ggacggcggg aggccatcgg
      781 tgacgcgctg tggcaacatc cgggcgtcga cgggatcgtc ttcaccggct ccaaggcggt
      841 gggcctgcgg atccacgccg gggtgagcgg gcgctggatc aagccctgtc tgatggagct
      901 ggggggcaag aacgccgcgg tcgtcaccgc gagcgccgac ctcgacgccg cggcggaggg
      961 cgtgatgcgc tcggcgttcg gcctccagaa ccagaaatgc agcgcgacct cgcgggtgta
     1021 tgtggaccgc cgggtcgccg agccgttcct cgcgcgcctg gtcgagaaga cccgggcgat
     1081 ccggatggga gacccgaccg agcgcgacgt gtacttcgga ccggtgatca atggcgcggc
     1141 cgtggagcgg ttcgagcggg cggtcgccca ggcggggggc gaaggcacga tcgtgctcgg
     1201 cggcgcgcgc ctgagaggcg gagtgttcga caaggggcac ttcgtcgccc ccacgatcgc
     1261 acgcctgccg ctggcgagct cgctctatcg cgaggagctg ttcgtgccct tcctcgcggt
     1321 gggtgaggtg agcggcctgg acgaggcgat cgcgcagacc aacgacgtgg agtacgggtt
     1381 gaccgcgggc atcttctccg ccgatcccgc ggaggtggcg cgcttcttcg acgaggtcga
     1441 ggccggggtg tgctacgcca acaagcgcag cggcgccacc accggcgcct ggcccggggc
     1501 gcaggcgttc tgcggctgga aggggtcggg ctccacaggg aagggcgggt gcggaccgta
     1561 ctacgtcgcc cagttcatgc gggagcagaa ccggacggtc atcgagacct gaccccgggg
     1621 cggcagccga atctcaaccg gaaggacagc gcgtgcgcga ctaccccaag atcgtggtac
     1681 ccccgcccgg accccgggcc caggccgtcg tccggcggga cgaggcctgg acctcgccct
     1741 gctacatcaa ggagtacccg ctggtcgtct cccatggccg ggggccgatg gtcgaggacg
     1801 tggacggcaa ccgcttcctc gatttcatgg ccggcatcgc ggtctgctcc accggctact
     1861 cccacccgaa ggtggtggcg gcggtcaagg aggcggccga ccggttcctc cacatctgcg
     1921 gctccgactt ctactacgag agcatggccg agctctgcga acgcctggcg cggctcgctc
     1981 ccgggccgtc gcggaagcgc gtcttcctca ccaactccgg cacggaagcc accgaaggcg
     2041 ccatcaagct ggcgcgcttc gccacccggc ggaccgccat catcgccttc cggggcgcgt
     2101 tccacggccg cagcaccggg gccgtgaccc tcacctcc
//
LOCUS       DASUYN010000390         2002 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_343357, whole genome shotgun sequence.
ACCESSION   DASUYN010000390 DASUYN010000000
VERSION     DASUYN010000390.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2002
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_343357"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(93..512)
                     /locus_tag="VF061_07610"
     CDS             complement(93..512)
                     /locus_tag="VF061_07610"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX6669409.1"
                     /translation="MPAPPTGTILLVDDEDGVRVVLRRQLVAQGHTVLEASHGAEAIA
                     VVRMRRGNLDLVLSDVVMPEMNGTELAATLVRDYPGLPVILMSAYAPAGLTQVGPGHK
                     VPVLQKPFTSDQLEELIRVSLEVQGRRRREGRPTAAL"
     gene            complement(590..1210)
                     /locus_tag="VF061_07615"
     CDS             complement(590..1210)
                     /locus_tag="VF061_07615"
                     /inference="COORDINATES: protein motif:HMM:NF012696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004089 - carbonate dehydratase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HEX6669410.1"
                     /translation="MVPAHEALERLREGNRRFVANVHGANGFPGQARPADLATGQQPF
                     AIILGCSDSRVPAEIVFDQGLGDLFVIRVAGNIVAPSQVGSVEFAATRFSTRLVVVLG
                     HSQCGAILATLEELRRPREDQSRNLRAIVDRVRPSVEGLLATELRHDFDALVREGVRA
                     NIRASVDHLRHGSQVLEQLIQEEGLRVVGAEYALETGVVEFLEGVA"
     gene            1345..>2002
                     /locus_tag="VF061_07620"
     CDS             1345..>2002
                     /locus_tag="VF061_07620"
                     /inference="COORDINATES: protein motif:HMM:NF020296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA alkylation repair protein"
                     /protein_id="HEX6669411.1"
                     /translation="MTSGAVREALAWLERRGSQRTREEMLSRYGITAPKAYGVPVGAI
                     QQLGKQLGRDHDLAGALWETGWYEARMLAAFVDQPARVTPAQMDRWVRDFDNWGICDT
                     VCFHLFDRTAHAWKKVGPWSRRREEFVKRAAFALLAGLVLHDKRAGDEAYLATLPLIE
                     RAAADDRNFVKKGVSWALRVMGRRNRALNAACLATARRLADSDQPAARWIGRQAVKEL
                     E"
BASE COUNT          304 a          687 c          740 g          271 t
ORIGIN      
        1 ggagctgacg gagacgatct cgggcgtccg cctggtacac aaccgtctgg tggtgcggcg
       61 gtgagcgacc cggactcgtc gccgagcggg gatcagagcg cggccgtcgg ccggccctcc
      121 cgccgccggc ggccctgcac ctccagcgag acccggatca gctcctcgag ctggtccgac
      181 gtgaacggct tctggagcac cggcaccttg tggccggggc cgacctgggt cagcccggcc
      241 ggcgcgtagg ccgacatcag gatgaccggg agcccggggt agtcccggac cagcgtggcc
      301 gcgagctcgg tgccgttcat ctcgggcatc accacatccg agagcacgag gtccaggttg
      361 ccgcgccgca tccgcacgac cgcgatggcc tcggcgccgt ggctggcctc gagaacggta
      421 tgtccctgcg cgacgagctg gcggcggagg acgacacgaa cgccgtcctc gtcatccacg
      481 aggaggatcg tgccggtcgg cggtgcgggc atggtctctc cgggaagagg ccggagatcc
      541 cggccctcgt cggggatagt ctaccccccg gcgaagaccc cgcaagacgt caggcgacgc
      601 cttccaggaa ctccaccacc ccggtctcca gggcgtactc cgccccgacc acccgtagtc
      661 cctcctcctg gatgagctgc tccaggacct gcgagccgtg gcggaggtga tccaccgagg
      721 cccggatgtt ggcccggact ccctcgcgga ccagggcatc gaagtcgtgc cgaagctcgg
      781 tggcgagcag tccctccacg gagggacgca cccggtccac gatcgcgcgc aggttgcggg
      841 actggtcctc cctcggccgg cggagctcct ccagggtggc caggatcgcc ccgcactggg
      901 agtggcccag gaccaccacc agccgggtgg agaagcgggt ggcggcgaac tcgacgctcc
      961 ccacctggga cggggcgacg atgttgcccg cgacccggat gacgaacaga tcgcccaggc
     1021 cctggtcgaa gacgatctcg gccggcaccc gggagtcgga gcagccgagg atgatggcga
     1081 acggctgctg gccggtggcc aggtccgccg gccgggcctg gccgggaaag ccgttggccc
     1141 cgtggacgtt ggcgacgaac cgccggttgc cttcccgcag ccgctcgaga gcctcgtgtg
     1201 ccggtaccat cgccgatgcg ttctcccgtt cgctcagtgt gagtcagttt acgcggaccc
     1261 tggccggcct gcgcatggcg ttgcatagat aatgcggctg ggccgcgccc gccctgtccc
     1321 aactcgaggc cacgggagcg accgatgacg agcggagccg tgcgcgaggc gctcgcctgg
     1381 ctggagcgcc gggggagcca gcgcacccgt gaggaaatgc tgtcgcgcta cggcatcacg
     1441 gcgccgaagg cgtacggcgt gccggtgggc gcgatccagc agctcggcaa gcagctgggg
     1501 agggaccacg acctggccgg cgcgctgtgg gagaccgggt ggtacgaggc gcggatgctg
     1561 gcggcgttcg tggaccagcc ggcgcgcgtt accccggcgc agatggatcg ctgggtccgc
     1621 gacttcgaca actggggcat ctgcgacacc gtctgcttcc acctcttcga tcgcaccgcc
     1681 cacgcctgga agaaggtggg accgtggagc aggcggcggg aagagttcgt caagcgcgcg
     1741 gcgttcgcac tgctggcggg gctcgtgctg cacgacaagc gggccggcga tgaagcctac
     1801 ctcgccaccc tgccgctgat cgagcgcgcg gcggcggacg accgcaactt cgtgaagaaa
     1861 ggggtgagct gggcgctccg ggtcatgggt cggcgcaacc gcgcgctcaa cgcggcctgc
     1921 ctggccaccg cgcgccggct ggccgattcg gaccagccgg cggcgcgatg gatcgggcgt
     1981 caggcggtga aggaactgga ga
//
LOCUS       DASUYN010000391         2323 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1004603, whole genome shotgun sequence.
ACCESSION   DASUYN010000391 DASUYN010000000
VERSION     DASUYN010000391.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2323)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2323)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2323
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1004603"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..471
                     /locus_tag="VF061_07625"
     CDS             <1..471
                     /locus_tag="VF061_07625"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HEX6669412.1"
                     /translation="GEVAPELKELIEVTERALWAGLAAAVAGGRLTDISAAVEGSIRA
                     NDHRYGIVDHYGGHGIGTEMHQDPHVLNHGRPGRGPRLVPGLALAVEPMVTLGRPGTR
                     ELEDGWTVVTLDGSYAAHWEHTVAITETGPWVTTAADGGFSRFAELGLKVPQRA"
     gene            680..1120
                     /locus_tag="VF061_07630"
     CDS             680..1120
                     /locus_tag="VF061_07630"
                     /inference="COORDINATES: protein motif:HMM:NF019656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1707 domain-containing protein"
                     /protein_id="HEX6669413.1"
                     /translation="MSEPVEPGSLRAGNADRERVVALLNGAFAEGRLDVRELDERVAA
                     AYAAKTMGELAPLTADLPVSRSPARRPASAPATPDREIERSASRAAVGGALGLFLVNV
                     LIWAAVSLSTGEWIYFWPIWTAIPFVFAVMAVASQRNRDRRRDG"
     gene            1271..1492
                     /gene="infA"
                     /locus_tag="VF061_07635"
     CDS             1271..1492
                     /gene="infA"
                     /locus_tag="VF061_07635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012039277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HEX6669414.1"
                     /translation="MPKKDGAIEVEGRVVEPLPNAMFRVELSNGHRVLAHISGKMRQH
                     YIRILPEDRVVVELSPYDLSRGRIVYRYK"
     gene            1542..1655
                     /gene="rpmJ"
                     /locus_tag="VF061_07640"
     CDS             1542..1655
                     /gene="rpmJ"
                     /locus_tag="VF061_07640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003720928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HEX6669415.1"
                     /translation="MKVNPSVKPICDKCKVIRRHGRVMVICENLRHKQRQG"
     gene            1832..2212
                     /gene="rpsM"
                     /locus_tag="VF061_07645"
     CDS             1832..2212
                     /gene="rpsM"
                     /locus_tag="VF061_07645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009125149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HEX6669416.1"
                     /translation="MARLAGVDLPREKRMEIALTYIYGIGKTRAHATLAATGVSPDLR
                     SRDLSDEELVRLRDYIDANYRVEGDLRREVAQDIRRKIEIGTYQGIRHRRGLPVHGQR
                     TKTNARTRKGPKKTIAGKKKAGRK"
BASE COUNT          365 a          809 c          879 g          270 t
ORIGIN      
        1 ggcgaggtgg cgcccgagct caaggagctg atcgaggtca ccgagcgggc gctgtgggcc
       61 gggctggccg cggccgtcgc cggcggccgc ctcaccgaca tcagcgccgc ggtggagggc
      121 tcgatccggg ccaacgacca ccggtacggg atcgtcgacc actacggcgg ccacggcatc
      181 ggcaccgaga tgcaccagga cccgcacgtg ctcaaccacg gccgccccgg ccgcggcccc
      241 cggctggtgc cgggcctggc gctggcggtg gagccgatgg tcaccctcgg ccgcccgggc
      301 acccgcgagc tcgaggacgg ctggaccgtc gtcaccctgg acgggtcgta cgcggcgcac
      361 tgggagcaca ccgtcgcgat caccgagacc gggccgtggg tgaccaccgc ggcggacggc
      421 ggcttcagcc ggttcgccga gctgggcctg aaggtgccgc agcgggcatg agcgagcgcg
      481 agggctcgca gcgcgagcgg ggagcgagga gggctggccg gccggcgctt gcgcctgccg
      541 gtctgtccga ggagcgggca cagcgcgagc gcgtgggctc gcagcgccag cggggagcga
      601 ggagggctgg ccggccggct gccccgcgcg tgggcgcggg catcggcagg gtgcctgctt
      661 ccctggccga ggagcgggca tgagcgagcc ggtggagccc gggtcgctgc gggccggcaa
      721 cgcggaccgc gagcgggtgg tggcgctgct caacggcgcc ttcgcggagg gccggctgga
      781 cgtccgggag ctggacgagc gggtggcggc ggcgtacgcg gcgaagacga tgggcgagct
      841 ggccccgctg accgcggacc tgccggtgag ccggtcgccg gcgcgccggc cggcctcggc
      901 gccggccacc ccggaccggg agatcgagcg gagcgccagc cgggccgcgg tcggcggcgc
      961 tctcggcctc ttcctggtca acgtgctgat ctgggcggcg gtgtcgctca gtaccgggga
     1021 gtggatctac ttctggccga tctggacggc aatcccgttc gtcttcgcgg tcatggcggt
     1081 ggcgtcgcag cgcaaccggg accggcgccg ggacggctag gctggccggt tttgccgtcc
     1141 aaggcatgcc tgcgtacact gtgacgtcgg cgttcgcgcc gccttccttt gtgctgtggc
     1201 cgcaccgtgg aaggcgccct cgagttgcga gtgccttgcc agacgaccag ttgagtagtt
     1261 agcggaggac atgcccaaga aggacggagc catcgaggtc gagggccgcg tcgtcgagcc
     1321 cctgccgaac gcgatgttcc gggtggagct gtccaacgga caccgggtgc tcgcccacat
     1381 cagcggcaag atgcgccagc actacatccg catcctgccc gaggaccgcg tggtggtgga
     1441 gctctcgccg tacgacctgt cccgtggacg catcgtctac cgctacaagt gatcccgccc
     1501 gctggccccg cggctggcag caccgaggag aaggcacagc cgtgaaggtc aacccgagcg
     1561 tcaagccgat ctgcgacaag tgcaaggtga tccgccggca cgggcgggtc atggtgatct
     1621 gcgagaacct gcgccacaag cagcgccagg gctagcagca gcaagccaca ccgccgggag
     1681 cttgcgaccg gcgcggccag cagagcgcct cccatctggg gcccgtcgaa tcgggccgca
     1741 ggccaccccc ggtcggaggc cggggctccc gccgggcggc gggaggggga gtgcggcaga
     1801 cctccgcgaa gcacgaagga gcaccgcccg gatggcacgc ctcgccggcg tcgacctccc
     1861 ccgcgagaag cggatggaga tcgcgctcac ctacatctac ggcatcggca agacccgcgc
     1921 gcacgcgacg ctcgcggcca ccggggtcag ccccgacctg cgttcccgcg acctgtccga
     1981 cgaggagctg gtccggctgc gcgactacat cgacgcgaac taccgggtcg agggcgacct
     2041 gcgccgcgag gtggcgcagg acatccgccg caagatcgag atcggcacct accagggcat
     2101 ccggcaccgc cgcggcctgc ccgtgcacgg ccagcgcacc aagaccaacg cccgcacccg
     2161 caaggggccg aagaagacca tcgccggcaa gaagaaggcc ggacggaagt aggagacgcc
     2221 aagacatgcc tcccaggtcc cgtaccgccg ccggcgccgt caagaaggtc cggcgtaagg
     2281 agaagaagaa cgtcgcccac gggcacgcgt acatcaagag cac
//
LOCUS       DASUYN010000392         2035 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1225499, whole genome shotgun sequence.
ACCESSION   DASUYN010000392 DASUYN010000000
VERSION     DASUYN010000392.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2035
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1225499"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..184)
                     /locus_tag="VF061_07650"
     CDS             complement(<1..184)
                     /locus_tag="VF061_07650"
                     /inference="COORDINATES: protein motif:HMM:NF013492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HEX6669417.1"
                     /translation="MSLLPLHLLGSPVLRRRSVEIGTPDEEIRRLVADMYETMDAARG
                     VGLAANQVGVARRVAVV"
     gene            complement(181..519)
                     /gene="yajC"
                     /locus_tag="VF061_07655"
     CDS             complement(181..519)
                     /gene="yajC"
                     /locus_tag="VF061_07655"
                     /inference="COORDINATES: protein motif:HMM:NF014725.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HEX6669418.1"
                     /translation="MLQAQTGSGSSLMVLVLQMAAIGLVFYFLILRPSSQARKRHAAL
                     LENLKKGDEVMTSGGLVGKVRDIKEVEGEGVRETRVTLETGTATVVVERSRIVRIGGS
                     TAPGAGATPA"
     gene            complement(550..1668)
                     /gene="tgt"
                     /locus_tag="VF061_07660"
     CDS             complement(550..1668)
                     /gene="tgt"
                     /locus_tag="VF061_07660"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008479 - tRNA-guanosine(34) queuine
                     transglycosylase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HEX6669419.1"
                     /translation="MFEFTLERTVGAARAGTLTLPHGTVQTPAFMPVGTHGVVRGLSA
                     AEVRRTGAQIILGNTYHLHIRPGEEVVRAMGGLHRFTTWDRPMLTDSGGFQVFSLEGL
                     RRIEEDGVTFQSHVDGTTRMLTPERAMEIQGALGADVAMAFDHVVPGQAPYDLALEGM
                     ERTLRWLERCRRRHAELDGAQTLWPIVQGGTHDDLRLRSLEGTLECGPWTGVAVGGLS
                     VGEPKPVMHRVLELLEPGLPRDIPRYLMGVGFPADLLEGIARGVDLFDCVAATRNGRH
                     GTAWVPTGRLNVRGAALKGSTEPLDPECDCETCTTYPRGYLRHLFVVEDILGLRLVSI
                     HNVRFLVRLGEQARARILDGTFDRWRREWLARVNGGAQ"
     gene            complement(1691..>2035)
                     /locus_tag="VF061_07665"
     CDS             complement(1691..>2035)
                     /locus_tag="VF061_07665"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEX6669420.1"
                     /translation="DVVQHLADSELVLGYRMRMILTEDRPPIQGYDQDKWATALHYPS
                     VPLAESRAQLRALRTANLRLFRGLGPAESERVGLHAERGPESLGHLLRLMAGHDLVHR
                     RQIERVLAAAGA"
BASE COUNT          293 a          740 c          713 g          289 t
ORIGIN      
        1 ccaccaccgc gacgcgccgt gccaccccga cctgattggc ggcgagcccc acgccgcgcg
       61 ccgcgtccat ggtctcgtac atgtcggcca ccaggcgccg gatctcctcg tccggtgtgc
      121 cgatctccac gctgcggcgg cggagcacgg gggagccgag cagatgcagc gggagcaggc
      181 tcatgccggc gtcgctcccg cgccgggcgc ggtggagccg ccgatgcgca cgatgcgaga
      241 gcgctccacc accacggtgg cggtgccggt ctccagcgtc acccgggtct cccgcacgcc
      301 ctcgccttcc acttccttga tgtcgcgcac cttgccgacc aggccgccgc tggtcatgac
      361 ctcgtcgccc ttcttgaggt tctccagcaa cgccgcgtgt cgcttcctcg cctggctcga
      421 gggccggagg atgaggaaat agaacaccag gccgatggcg gccatctgga gcaccagcac
      481 catgaggctg gagccggatc ccgtctgtgc ctgcagcatg tgtgagcctc gttggagatc
      541 atcgggccgt cactgcgccc cgccgttgac cctcgccagc cactcccgcc gccagcggtc
      601 gaaagtgccg tccagaatcc gggctcgggc ctgttcgccg agccggacca ggaagcgcac
      661 gttgtggatc gagaccagcc gcagcccgag gatgtcttcc accacgaaca ggtgccggag
      721 gtagccccgg ggatacgtgg tgcaggtctc gcagtcgcac tccgggtcca gcggctcggt
      781 cgatcccttg agcgcggcac cccggacgtt gaggcggccg gtcggcaccc aggccgtccc
      841 gtgacgcccg ttgcgggtcg ccgcgacgca gtcgaacagg tccacgccgc gcgcgatgcc
      901 ctccagcaga tccgccggaa atccgactcc cataagataa cgggggatat ccctcggcag
      961 accgggctcg agcagctcga gcacgcggtg catgaccggc ttcggctcgc cgaccgagag
     1021 cccgccgacg gcgacgccgg tccaggggcc acactccagc gtgccctcca gtgagcggag
     1081 acggagatcg tcgtgggtgc cgccctgcac gatgggccag agggtctgcg ccccgtccag
     1141 ctcggcgtgc cgccggcgac agcgctccag ccagcgcagg gtgcgctcca tgccctcgag
     1201 cgcgaggtcg tagggcgcct gcccgggcac cacgtggtcg aaagccatcg ccacgtcggc
     1261 gccgagggcg ccctggatct ccatcgcacg ctccggcgtg agcatccggg tggtgccgtc
     1321 cacgtggctc tggaaggtga cgccgtcttc ctcgatccgg cggaggccct ccagcgagaa
     1381 gacctggaac ccgcccgagt cggtcagcat cggacgatcc caggtggtga atcggtggag
     1441 tccgcccatg gcgcggacca cctcctcgcc ggggcggatg tgcaggtgat aggtgttgcc
     1501 gaggatgatc tgcgcgccgg tgcggcggac ctcggcggcg ctcaggccgc gcaccacgcc
     1561 gtgggtgccg acgggcatga acgcgggggt ctggacggtg ccgtggggaa gggtcagggt
     1621 ccccgctcgc gcggcgccga cggtgcgctc gagggtgaac tcgaacatca gccggcgggc
     1681 cgcgcagcgc tcatgctcct gccgccgcga gcacccgttc gatctgtcgc cggtgcacca
     1741 ggtcgtggcc ggccatcagc cggaggaggt gccccagact ctccggccca cgctcggcgt
     1801 gcagcccgac ccgctccgat tccgccgggc ccaggccgcg gaagaggcgg aggttcgcgg
     1861 tgcggagcgc ccggagctgg gcccgtgact ccgccagcgg caccgaaggg tagtggagcg
     1921 ccgtggccca cttgtcctgg tcgtagccct ggatcggcgg ccgatcctcg gtgaggatca
     1981 tccgcatccg gtagccgagc accagctccg agtccgccag gtgctgcacc acgtc
//
LOCUS       DASUYN010000393         3717 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1886497, whole genome shotgun sequence.
ACCESSION   DASUYN010000393 DASUYN010000000
VERSION     DASUYN010000393.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3717)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3717)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3717
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1886497"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1041
                     /locus_tag="VF061_07670"
     CDS             <1..1041
                     /locus_tag="VF061_07670"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEX6669421.1"
                     /translation="LSPGDKVLAARFGMFSHLWIDMAQRLGLQVEVLDTEWGEGAPVE
                     RYRDALAADKGHKIKAVLFTHNETATGVTSDVAGIRQALNETGHPALLMVDGVSSIAS
                     IDFRMDEWGVDLAVTGSQKGLMLPAGLGIVCASQKALALYEQAKLPRCFFDFGDMRKA
                     NATGYFPYTPSLPMLYGLRESLAMLLEEGLDAVFARHHRLAEGTRQAVKAWGLELCAR
                     APKWNSDTVSAIMVPPGVNGAEVIDIAYRRYDLALGAGLARMAGRLFRIGHLGDLNEL
                     MLLGGIAGAEMAMRDVGMNITPGSGVAAAQEYWRSTAKKLEKRELPPRAPDAQPPATA
                     PAKEKATAGAAR"
     gene            1038..1991
                     /locus_tag="VF061_07675"
     CDS             1038..1991
                     /locus_tag="VF061_07675"
                     /inference="COORDINATES: protein motif:HMM:NF015297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA ester lyase"
                     /protein_id="HEX6669422.1"
                     /translation="MSHTRYEPARPRLQRSELAVPGSQPPLFRKALESEVDYVFLDLE
                     DAVAPGDKEQARRNVIQGLLELDWRGAGKTICVRINGIDTHYMYRDVVDVVEQAGHRL
                     DTILIPKVGVPADVYLVDALLTQIEEAKGIDHRIGIDVLIETALGMANVEVIAQSSRR
                     LEAMHFGVADYAASCRARTVSIGGLNPDYPGDQWHAALARMIVACRAYGLRPIDGPFG
                     DFKDPEGYRQAARRGAALGIEGKWAIHPSQIALANEVFTPPPAEVERARRILSALDEA
                     AREGRGAAQLDGRMIDAASARMAQNVVGMAEAIENGKAVRR"
     gene            2033..3235
                     /locus_tag="VF061_07680"
     CDS             2033..3235
                     /locus_tag="VF061_07680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019515447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate--CoA ligase subunit beta"
                     /protein_id="HEX6669423.1"
                     /translation="MDIHEYQAKELLAGFGVAIPRGGVAYSPEQAVYRASEIGGARWA
                     VKAQIHSGARGKAGGIKLCGSEDEVRAAAKALLGKRLVTHQTGPEGRVVHRLYVEAAV
                     PIEREIYLGLVLDRKSERIMVVASPQGGMEIEEIARNSPDSILREVVEPAVGMTAFQA
                     REIAFGLGLTPAQVSRAVTTLLGAYRAFRDLDATMVEINPLVVTADAQLLALDCKMTF
                     DDNAMFRRPNVSELRDYAEEDPREAQAAEYGLNYVALDGNIGCIINGAGLAMATMDMI
                     KHAGGSPANFLDVGGGASPDRVAAAFKLVLSDSNIQAMLVNIFAGINRCDWVAQGVVQ
                     ATRETQLRIPLVVRLAGTNVEEGRRILKESGLPIITADTLAEAADRVVAALKTSKAGR
                     ASAGNGQP"
     gene            3232..>3717
                     /locus_tag="VF061_07685"
     CDS             3232..>3717
                     /locus_tag="VF061_07685"
                     /inference="COORDINATES: protein motif:HMM:NF014666.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HEX6669424.1"
                     /translation="MSILIDEKTRVLVQGFTGDKATFHAREMIAYGTNVVGGVTPGKG
                     GATHLERPVFNTVKEAVRETGATASIIFVPAAFCADSIMEAADAGIRFIVTITDGIPA
                     QDMMMVKRYLFRFPRERRTTLVGPNCAGIISPAKAMLGIMPGHIYMRGNVGLITRSGT
                     LG"
BASE COUNT          612 a         1250 c         1353 g          502 t
ORIGIN      
        1 ctctcgcccg gcgacaaggt gctcgccgcc cgattcggga tgttcagcca tctctggatc
       61 gacatggccc agcgtctggg gctccaggtc gaggtgctcg acaccgaatg gggcgagggc
      121 gcgccggtcg agcgctatcg cgacgcactg gccgccgaca agggccacaa gatcaaggcc
      181 gttctgttca cccacaacga gacggcgacc ggcgtcacca gcgatgtggc cgggatccgg
      241 caggcgctga acgagaccgg acatccggcg ctgctcatgg tggacggcgt gagctcgatc
      301 gcgagcatcg acttccggat ggacgagtgg ggcgtggatc tcgccgtcac cggctcccag
      361 aagggactca tgctccccgc cggtctcggc atcgtgtgcg ccagccagaa ggcgctggcg
      421 ctgtacgagc aggccaagct gccccgctgc ttcttcgact tcggcgacat gcggaaggcg
      481 aacgcgaccg gctatttccc ctacacgccc tcgcttccca tgctctacgg cctccgggag
      541 tccctcgcga tgttgctgga ggaggggctg gacgccgtct tcgcccgcca ccaccggctg
      601 gccgagggga ctcgtcaggc ggtcaaggca tgggggctcg aactctgcgc ccgtgcgccg
      661 aagtggaact ccgacacggt gagcgccatc atggtgccgc cgggagtgaa cggggccgag
      721 gtgatcgata tcgcctaccg ccgctacgac ctggcgctgg gagccgggct ggcgcggatg
      781 gcggggcgcc tgttccgcat cggacacctg ggcgacctga acgagctgat gctgctcggt
      841 gggatcgccg gcgccgagat ggcgatgcgc gacgtgggca tgaacatcac gccgggcagc
      901 ggcgtcgcgg cggcgcagga gtactggcgg agcaccgcga agaagctgga gaagcgcgag
      961 ctgccgccgc gcgcgccgga cgcccagccc ccggcgacgg cgccggccaa ggagaaggcc
     1021 accgcgggcg ccgcgcgatg agccacacgc gctacgagcc cgcccgaccc cggctgcagc
     1081 gcagcgagct ggcggtcccg ggctcgcagc cgccgctgtt ccggaaggcg ctcgagagcg
     1141 aggtggatta cgtcttcctc gacctcgagg acgcggtggc gccgggcgac aaggagcagg
     1201 cccggcgcaa cgtgatccag gggctcctcg agctcgactg gcgcggcgcc gggaagacca
     1261 tctgcgtccg gatcaacggg atcgacaccc actacatgta ccgcgacgtg gtggacgtgg
     1321 tggagcaggc ggggcaccgg ctggacacga tcctcattcc gaaggtcggg gtgccggcgg
     1381 acgtgtacct ggtggacgcg ctcctcacgc agatcgagga ggcgaagggc atcgaccacc
     1441 ggatcgggat cgacgtcctg atcgagaccg ccctgggcat ggccaacgtg gaagtgatcg
     1501 cgcagtcgag ccggcggctg gaggcaatgc acttcggggt ggccgattac gcggccagct
     1561 gccgcgcgcg caccgtgagc atcggggggc tcaaccccga ctatccgggc gaccagtggc
     1621 acgcggcgct cgcccgcatg atcgtggcct gccgggccta tgggctccgc ccgatcgacg
     1681 ggccgttcgg cgacttcaag gaccccgagg gctaccgcca ggcggcacgg cgtggcgcgg
     1741 cgctcggcat cgagggcaag tgggcgatcc atccgagcca gatcgcgctg gcgaacgagg
     1801 tgttcacccc gccgccggcg gaggtggaac gggcgcggcg aatcctgtcg gcgctggacg
     1861 aggcggcgcg ggaaggtcgc ggcgcggccc agctcgacgg ccggatgatc gacgccgcgt
     1921 ccgcgcgcat ggcccagaac gtggtgggca tggccgaggc cattgaaaac ggtaaggcgg
     1981 taaggcggta aggcggtacg gcggtaggac actccaacac ggggcccgca acgtggacat
     2041 acacgagtat caggccaagg agcttctcgc cggcttcggc gtggcgatcc cgcgcggtgg
     2101 agtggcctac agtcccgagc aggcggtgta ccgcgcctcg gagatcggcg gcgcccgctg
     2161 ggcggtgaag gcgcagatcc actcgggggc tcggggaaag gccggcggca tcaagctctg
     2221 cggcagcgag gacgaggtcc gtgcggcggc caaggcgctg ctcggcaagc ggctggtgac
     2281 ccaccagacg ggaccggagg gccgggtggt gcaccggctc tacgtcgagg ccgcggtgcc
     2341 catcgagcgg gagatctacc tcggcctggt gctggaccgg aagagcgagc gcatcatggt
     2401 cgtcgcctcc ccgcagggcg ggatggagat cgaggagatc gcccgcaatt cccccgactc
     2461 gatcctgcgg gaggtggtgg agccggcggt cggcatgacc gcgttccagg cccgggagat
     2521 cgccttcggg ctcgggctca cgccggccca ggtgagccgc gcggtgacca cgctgctggg
     2581 cgcctaccgg gcgttccgcg atctcgacgc gaccatggtg gagatcaatc cgctggtggt
     2641 gacggccgac gcccagctgc tggcgctcga ctgcaagatg acgttcgacg acaacgcgat
     2701 gttccgccgg ccgaacgtga gcgagctgcg ggactacgcc gaagaggatc cccgggaggc
     2761 gcaggccgcg gagtacggcc tcaactacgt ggccctggac gggaacatcg gctgcatcat
     2821 caacggtgcc gggctcgcca tggccaccat ggacatgatc aagcacgcgg ggggctcgcc
     2881 cgccaacttc ctcgacgtcg gcggcggcgc ctcccccgac cgggtcgccg cggccttcaa
     2941 gctggtgctc tccgacagca acatccaggc gatgctggtc aacatcttcg ccgggatcaa
     3001 ccgctgcgac tgggtggcgc agggcgtggt ccaggcgacc cgtgagaccc agctccggat
     3061 tcccctcgtg gtccggctcg ccggcaccaa cgtcgaagaa ggccgccgca tcctcaagga
     3121 gagcggcctt cccatcatca cggcggacac cctggcggaa gccgccgatc gggtggtcgc
     3181 cgccctcaag acctcgaagg ccggccgcgc gtcggcagga aacgggcagc catgagcatc
     3241 ctgatcgacg agaagaccag ggtcctggtg cagggcttca ccggggacaa ggcgaccttt
     3301 cacgcgcgcg agatgatcgc ctacggcacc aacgtcgtgg gcggggtcac cccgggcaag
     3361 ggcggcgcca cccacctcga gcgtccggtc ttcaacacgg tgaaggaggc ggtccgggag
     3421 accggcgcca ccgccagcat catcttcgtg cccgccgcct tctgcgccga ctccatcatg
     3481 gaggccgccg acgcggggat ccgcttcatc gtcaccatca ccgacgggat tcccgcccag
     3541 gacatgatga tggtgaagcg ctacctgttc cgcttccccc gggagcggcg caccaccctg
     3601 gtgggcccca actgcgcggg catcatcagc ccggccaagg cgatgctggg gatcatgccg
     3661 ggccacatct acatgcgggg gaacgtcggc ctcatcaccc gctcgggcac gctgggg
//
LOCUS       DASUYN010000394         2495 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_562605, whole genome shotgun sequence.
ACCESSION   DASUYN010000394 DASUYN010000000
VERSION     DASUYN010000394.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2495)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2495)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2495
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_562605"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..921
                     /locus_tag="VF061_07690"
     CDS             <1..921
                     /locus_tag="VF061_07690"
                     /inference="COORDINATES: protein motif:HMM:TIGR01494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HEX6669425.1"
                     /translation="GTVTEGRPAVRRIMSDDEARTLRLAASLERRSEHPLGEAIVAAA
                     AERGLDLAEPREFESRTGRGVSGAVDGHRVMVGNRSLLADAGVEPGRYAAESERLAAD
                     ALTPVFVAVDGRVEAVIGVADAVKPGSREAVEALRRMGLRSVMLTGDDARAAAGVARA
                     VGIDQVVANVLPERKLEEIRRLQAQGRRVAMVGDGINDAPALAQADVGIAMGTGTDVA
                     MEAGDITLMRGDPLGVPRAIALARRTMRVMRQNLFWAFVYNVVGIPIAAGALYPALGL
                     RLTPAMAAAAMAVSSVSVVMNSLRLRAVRV"
     gene            948..1283
                     /locus_tag="VF061_07695"
     CDS             948..1283
                     /locus_tag="VF061_07695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-sensitive transcriptional regulator"
                     /protein_id="HEX6669426.1"
                     /translation="MTTAACACGARPGDGEHAVAVDPEIKRSVLTRLRRIEGQVRGLQ
                     KMVEEERYCADVLTQVTSVQEALRGVGRAMLHNHLRHCATDAIRSGDDARTEAMYDEI
                     MELVYRSVR"
     gene            1322..2197
                     /locus_tag="VF061_07700"
     CDS             1322..2197
                     /locus_tag="VF061_07700"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX6669427.1"
                     /translation="MPRWLRWTGRLLAGLLLVVVLAVAAVYILSSLAIRKTYQFPDST
                     VRAATDSASVAWGRHLLEAVAKCQDCHDADLGGKGMMDDPAFARLAAPNLTRGRGGIA
                     DYTDADLERAIRHGVGPDRRPLVFMPSDAYGALTDEDLAALIGYLRTFPPVDREHPDP
                     RIGPVARVLYLTGKFPLLPVKITRHDAPRAPRAHGVTVEYGQYLATVAGCLACHGQTL
                     AGDANPDAPDITVGRLADWTEEDFFRALREGKRPDGTTIDPMKMPWVRSGLMTDSEIR
                     AVWTYMRSLPAGRKE"
     gene            complement(2204..>2495)
                     /locus_tag="VF061_07705"
     CDS             complement(2204..>2495)
                     /locus_tag="VF061_07705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669428.1"
                     /translation="QVVFTVAFFCLSGYNGPITAVIFDVVPSRISATVAGAYLLFIHL
                     AGDAIALPLVGMLSDQFGLDRAILLLPLVVIAGGAVILGATRTIARDMARVA"
BASE COUNT          367 a          859 c          928 g          341 t
ORIGIN      
        1 ggcaccgtga ccgagggccg accggcggtg cggcgcatca tgagtgacga cgaggcgcgg
       61 accctccgac tcgccgcgtc gctggagcgg cggagcgagc atccgctggg cgaggcgatc
      121 gtggccgcgg ccgccgagcg agggctcgac ctcgcggagc cgcgggagtt cgagagccgc
      181 accggccgcg gcgtgtccgg cgcggtggat gggcaccggg tcatggtggg gaaccggtcg
      241 ctgctcgccg acgcgggggt ggagcccgga cggtacgcgg cggagtcgga gcggctcgcc
      301 gccgacgcgc tcacgcccgt cttcgtcgcg gtggacgggc gcgtcgaggc ggtgatcggc
      361 gtggccgatg cggtcaagcc cggcagccgc gaggccgtgg aggcgttgcg ccgcatgggt
      421 ctccggagcg tgatgctgac cggcgacgac gcgcgggccg cggcgggagt ggcgcgagcg
      481 gtcgggatcg atcaggtcgt cgccaacgtg ctccccgagc ggaagctgga ggagatccgg
      541 cggctccagg cccagggacg tagggtcgcg atggtgggcg acgggatcaa cgacgcgccc
      601 gccctcgcgc aggccgacgt gggcatcgcg atgggcaccg gcaccgatgt ggccatggaa
      661 gccggcgaca tcaccctgat gcggggcgat cccctgggcg tgccccgcgc gatcgccctc
      721 gcccggcgga ccatgcgggt gatgcggcag aatctcttct gggccttcgt ctacaacgtg
      781 gtcggcattc ccatcgccgc cggggccctc tatcccgccc tcggcctgcg tctcacgccg
      841 gcgatggcgg cggcggcgat ggcggtgagc tcggtgagcg tggtgatgaa cagtctgcgg
      901 ctgcgcgcgg tgcgcgtgtg acggcccgac ccgaggggag tggcgacatg acgaccgcgg
      961 cgtgcgcttg cggcgcgaga cccggagacg gcgagcacgc cgtcgcggtg gatcccgaga
     1021 tcaagcgctc ggtgctcacc cggctccggc gcatcgaggg ccaggtgcgc gggctccaga
     1081 agatggtgga ggaggagcgc tactgcgccg acgtactgac ccaggtcacc tcggtccagg
     1141 aagccctccg gggcgtcggc cgggccatgc tgcacaatca tctgcgccac tgcgccaccg
     1201 acgcgatccg ctccggcgac gacgcccgga cggaggccat gtacgacgag atcatggagc
     1261 tggtgtacag gagcgtgcgg tagcggtatc ttgtcgctcc gctttcaccc tggagtatgc
     1321 cttgccccgc tggctccgat ggaccggccg cctcctggcc ggtctcctgc tggtcgtcgt
     1381 gctcgccgtc gccgccgtct acatcctttc ctccctcgcc atccgcaaga cctaccagtt
     1441 ccccgactcc acggtccggg cggccacgga ctccgcctcg gtcgcctggg ggcgccacct
     1501 gctggaggcg gtggccaagt gccaggattg ccacgacgcc gacctgggtg ggaaagggat
     1561 gatggacgac ccggccttcg cgcgactggc ggcccccaac ctgacgcggg gccgtggcgg
     1621 aatcgccgac tacaccgacg cggatctgga gcgcgccatc cggcacggcg tgggccccga
     1681 ccgccgaccg ctggtcttca tgccctccga tgcctacggc gccttgaccg acgaggacct
     1741 cgccgcgctg atcgggtatc tgcggacctt cccgcccgtg gaccgcgagc accccgatcc
     1801 caggatcggg ccggtggcgc gggtgctgta cctcaccggc aagtttccgc tcctcccggt
     1861 gaagatcacc cggcacgacg cgccccgggc tccacgagcg cacggggtca cggtcgagta
     1921 cgggcagtat ctggccacgg tcgccggctg cctggcctgc cacggccaga ccctggccgg
     1981 cgatgccaat cccgacgcgc ccgacatcac cgtgggccgg ctcgccgact ggaccgagga
     2041 ggatttcttc cgcgcgctgc gggagggcaa gcggcccgat gggaccacca tcgacccgat
     2101 gaagatgccc tgggtccgga gcgggctcat gaccgacagc gagatccgcg cggtatggac
     2161 ctacatgcga tcgctgccgg ccggtcggaa ggagtagtgc ggctcaggcc acccgggcca
     2221 tgtcgcgtgc gatggtgcgg gtcgctccca ggatgaccgc gcctccggca atcaccacca
     2281 gcggaagcag caggatggcg cggtccaggc cgaactggtc ggagagcatg cccaccagcg
     2341 gcagggcgat ggcgtcgccg gccagatgga tgaagaggag ataggccccc gcgaccgtcg
     2401 cgctaatgcg tgagggcacc acgtcgaaga tcaccgcggt gatcggcccg ttgtacccgg
     2461 agagacagaa gaacgcgacg gtaaagacca cctgg
//
LOCUS       DASUYN010000395         3133 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1445713, whole genome shotgun sequence.
ACCESSION   DASUYN010000395 DASUYN010000000
VERSION     DASUYN010000395.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3133)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3133)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3133
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1445713"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..570)
                     /locus_tag="VF061_07710"
     CDS             complement(<1..570)
                     /locus_tag="VF061_07710"
                     /inference="COORDINATES: protein motif:HMM:NF012958.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
                     /protein_id="HEX6669429.1"
                     /translation="MTQLRRRPRGRVERIHAGPESPGLDRDLTVYLPPSYDRGPRHFP
                     VLYMQDGQNLFDPEESFAGSWRVDLAMDQAAARGFEGIVIGIPNAGEGRLAEYSPFDD
                     PETGPGRGSEYVGYMADTIKPLVDARYRTIPARGTTCVAGSSMGGLISLFAFFARPDV
                     FGAVAAMSPSLWYADRAILEVVAAAPFRAG"
     gene            complement(581..1471)
                     /locus_tag="VF061_07715"
     CDS             complement(581..1471)
                     /locus_tag="VF061_07715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669430.1"
                     /translation="MIAGAVERLARYFGTESSRPAYLARRALGRPRPGDPALAERLRQ
                     ELAGGIRPDGTVPGGSVPTIWRVHELLDLGEPEDSPSLTRPLAWLLDLQDQPGAFHDG
                     CDRSRHARRLCHHYIAGFFAPAPPTQRLAPVTLPTGKVFRVEPAARFAISCLALRAAL
                     RAGYKDRPAVRRHLQSLAQISEQWTEWNGYFAPDVMVAGLHALATAGDTYRDVVRRLV
                     DLVTSNQGVEGDWPAADLFPVVDALQAANTLDAQVTVRRATTALVARQRADGTFGGGA
                     QQERALIGLRALLWAARAPA"
     gene            complement(1468..1827)
                     /locus_tag="VF061_07720"
     CDS             complement(1468..1827)
                     /locus_tag="VF061_07720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669431.1"
                     /translation="MALSRLFLAWLAVAVWLLIWELVASRPGAARGNGRLRRARVFLV
                     EALLLTLFGALWFGSLGSGAWWLVFGLVGALREWPGPRGRRPGENTDLAALALAALGV
                     LRTVAAGGLLAWRLGPA"
     gene            complement(1835..>3133)
                     /locus_tag="VF061_07725"
     CDS             complement(1835..>3133)
                     /locus_tag="VF061_07725"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX6669432.1"
                     /translation="IALLGATLIDGSGGPPIAASAVVIRRGHIESVGSRADFQLPQRT
                     REVDLTGRWIMPGLVDAHVHLVDPQAGVARWSMERYLAWGVTTVRDMHGPLRTALAVR
                     RELDRGWRPGPRVYSAGAMVDGAPSTYPDAMTARNAREARRGVDRLVNAGTDLIKLYT
                     RVDRTLIGPVLDEARTFNLPVAGHLGLTDAVTAARRGLASLEHLSGIPEAAVADPAPL
                     YAAHERSFFEGWTAFERAWVWLDSAALARVAGVLAARNVVVVPTLVVHETFSRLDEPA
                     VLNDTMLTAVPEDERRRWNADDMIQRAGWTGSDFAAFRRARASQDLFLRMFHGKGGRI
                     AVGTDAANQMLIPGYAVHRELELLVRAGLTPAEAISAATRNGALLLRVDSLGLVAPGK
                     VADLVVLARDPLSDIRNTLAIERVISRGRMLSPDSIRARW"
BASE COUNT          466 a         1160 c         1130 g          377 t
ORIGIN      
        1 cccggcccgg aacggggccg ctgcgaccac ctcgaggatg gcgcggtccg cgtaccagag
       61 cgacgggctc atcgcggcca ccgcgccgaa cacgtcgggc cgcgcgaaga aggcgaacag
      121 gctgatgagc ccgcccatcg aagagccggc cacgcaggtg gtcccacggg ccgggatcgt
      181 gcggtagcgc gcgtccacca gcggcttgat cgtgtccgcc atgtagccca cgtactcgct
      241 cccccggccg ggtcccgtct ccggatcgtc gaacgggctg tactcggcga ggcgcccctc
      301 gccggcgttg ggaatgccga tcacgatgcc ctcgaagccg cgggcggcgg cctggtccat
      361 cgcgaggtcc acccgccagg agccggcgaa gctctcctcc ggatcgaaga ggttctgccc
      421 gtcctgcatg tacagcaccg gaaaatggcg cgggccccgg tcgtaggagg gcggaagata
      481 gacggtcagg tcccgatcca gcccgggaga ttcgggcccg gcgtggatcc gctcgaccct
      541 cccccgggga cgccggcgca gctgcgtcat ggtcgtccgt tcaggctggg gcccgcgccg
      601 cccagagcag ggcgcggagg ccgatgaggg cgcgctcctg ctgcgcgccc ccgccgaagg
      661 ttccgtcggc ccgctgccgg gcgacgaggg cggtggtggc gcggcgcacg gtgacctggg
      721 cgtcgagggt gttcgccgcc tggagcgcat cgaccaccgg gaagagatcg gccgccggcc
      781 agtcgccctc gaccccctgg ttcgaggtga ccaggtccac caggcggcga accacgtcgc
      841 ggtaggtatc gcccgcggtc gcgagtgcgt gcagccccgc caccatcacg tcgggggcga
      901 aatagccgtt ccactcggtc cattgctcgg agatctgcgc cagactctgg aggtgtcggc
      961 ggacggcggg ccggtccttg tagccggccc ggagcgcggc ccggagggcg aggcagctga
     1021 tggcgaacct ggccgcgggc tcgactcgaa acaccttgcc cgtgggcagg gtcaccggtg
     1081 cgagccgctg ggtcggcggc gcgggcgcga agaatcccgc gatgtagtga tgacagagcc
     1141 gccgagcgtg acggctccgg tcacagccgt cgtgaaaggc gccgggctga tcctggagat
     1201 cgagcagcca ggccagcggc cgggtcagcg acggtgaatc ctccggctcg cccagatcga
     1261 gcagctcgtg gacgcgccag atcgtcggca ccgagccgcc ggggaccgtc ccgtcgggac
     1321 ggatgccccc ggcgagctcc tgccggaggc gttccgccag ggccgggtcc ccggggcggg
     1381 ggcgtccgag cgcccgccgg gcgagatagg ccggtcggct cgactcggtc ccgaagtagc
     1441 gcgccagccg ctcgaccgct ccggcgatca tgcgggtccg agccgccagg ccaggagccc
     1501 cccggcggcc accgtgcgga gcaccccgag agccgccaag gcgagcgcgg cgaggtcggt
     1561 gttctcgccg ggacgccggc cccgcggtcc gggccactcc cggagcgcgc cgaccaggcc
     1621 gaacaccagc caccacgcgc ccgagccgag gctgccgaac cagagcgcgc cgaacagcgt
     1681 gagcaggagc gcctccacca ggaagacgcg ggcgcgacgc agccgcccgt tgcccctggc
     1741 ggcgccgggt ctcgaggcga ccagctccca gatcagcagc cacaccgcca ccgcgagcca
     1801 ggccaggaac agtcggctca gggccatcag cctctcacca ccgggcccgg atgctgtcgg
     1861 gcgacagcat ccggcccctg ctgatcaccc gctcgatagc gagggtgttg cggatgtcgg
     1921 acagcggatc gcgcgccagc accaccagat ccgccacctt gccgggggcg acgagcccca
     1981 gggagtccac ccgcagcagc agggcaccgt tccgggtggc cgcgctgatc gcctccgccg
     2041 gcgtgagacc cgcccgcacc agcagctcca gctcgcgatg caccgcgtag ccggggatca
     2101 gcatctggtt ggccgcgtcg gtccccaccg cgatcctccc gcccttcccg tgaaacatcc
     2161 ggaggaagag atcctggctc gcgcgggccc ggcggaacgc ggcgaagtcg ctcccggtcc
     2221 atcccgcgcg ctggatcatg tcgtcggcgt tccaccggcg tcgctcgtcc tccggaacgg
     2281 cggtcagcat cgtgtcgttg agcaccgcgg gctcgtcgag ccggctgaag gtctcgtgca
     2341 cgaccagcgt cggtaccacg accacgttgc gggcggccag cacgccggcc accctggcca
     2401 gcgccgccga atcgagccag acccaggccc gctcgaatgc cgtccagcct tcgaagaagg
     2461 agcgctcgtg cgcggcgtag agcggtgcgg gatcggccac cgccgcttcg ggaatcccgc
     2521 tcaggtgctc cagcgaggcg agcccccggc gggcggccgt caccgcgtcg gtgagcccga
     2581 ggtggccggc gacagggagg ttgaaggtgc gggcctcgtc cagaaccgga ccgatcagcg
     2641 tccggtccac ccgggtgtac agcttgatca ggtcggtgcc cgcgttgacc agccggtcca
     2701 cgccgcgccg ggcctcccga gcgttccggg cggtcatggc atccggataa gtggatgggg
     2761 caccgtccac catcgcgccc gcggagtaca cccggggccc cggccgccac ccgcggtcca
     2821 gctcccggcg cacggcaagg gcggtgcgca gcggaccgtg catgtcccgc accgtggtca
     2881 cgccccaggc gagatatcgc tccatggacc agcgcgccac gccggcctgg ggatcgacca
     2941 ggtggacgtg ggcgtccacc agtccgggca tgatccaacg gcccgtgagg tccacctccc
     3001 tcgtgcgctg cggcagctga aaatcggcgc gcgaccccac cgactcgatg tggccacgcc
     3061 ggatgaccac cgccgacgcg gcaatcggcg ggcccccgct cccatcgatg agggtggccc
     3121 cgagcaaggc gat
//
LOCUS       DASUYN010000396         3392 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1226018, whole genome shotgun sequence.
ACCESSION   DASUYN010000396 DASUYN010000000
VERSION     DASUYN010000396.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3392)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3392)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3392
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1226018"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(35..682)
                     /locus_tag="VF061_07730"
     CDS             complement(35..682)
                     /locus_tag="VF061_07730"
                     /inference="COORDINATES: protein motif:HMM:NF015510.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein carrier protein LolA"
                     /protein_id="HEX6669433.1"
                     /translation="MRLLLACLLGRAATATAHAQDAESIVGRSSRVYRSLSSLTADFV
                     QIIDNPMIDSAESRGTLVQAGPAKLSMRFSEPPSEAVVIDGEHVWVYTPSTVPDQVLR
                     LKAPSGGPVYGYNLLAWFLDRPAERYQATYVREDKVGARGVDVVELTPAVPDLPFERA
                     VLWLDRQDGLPRRLEITEKSGALRTLALSNLRVNRRVPHSTFEFKVPSGARVVDQ"
     gene            complement(679..1719)
                     /gene="aroF"
                     /locus_tag="VF061_07735"
     CDS             complement(679..1719)
                     /gene="aroF"
                     /locus_tag="VF061_07735"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HEX6669434.1"
                     /translation="MLVVMRHGAPQEDIDRVIATIEDMGYQARPMPGKQRTTVGLVGN
                     DGRVDSSRLEALPGVQEILHVTKPYKQVSREWKGESTIVRLPGGLSIGGEDVLVMAGP
                     CSVESERQILDAAHAVREAGATVLRAGAFKPRSSPYSFQGLGRSGLKLLARAREETGL
                     LIVTEAMDAEGLDYVLEVADIVQIGARNMQNYSLLKHAGRARKPVLLKRGLSATIQEL
                     LLSAEYILAEGNPDVILCERGVRGFDTSTRNLFDLSAIPVVHGLSHLPIVADPSHGTG
                     HRDMVIPMARAAVAAGADGLLVEVHPAPDRALSDGAQSLYPEQFERLMREARLIVEAI
                     GRRLPEAAGARA"
     gene            complement(1881..>3392)
                     /locus_tag="VF061_07740"
     CDS             complement(1881..>3392)
                     /locus_tag="VF061_07740"
                     /inference="COORDINATES: protein motif:HMM:NF014516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX6669435.1"
                     /translation="VAAAETAVRDTVETLAQRERALAEAVAAADQAREAERQAAAARE
                     DASRQAANLTRESADSESQLARLSERLSRSEQRLTEIDTALVEGELARNRLDEELGTS
                     RSRLAELEGEQEAAREQRVHWQVREAHVAGGLRSAEERLARAESMRVEAESAATALAG
                     ELAQLDLDEAGLVKQQGEWREARAEREVELHQLEHAAADAEAALADAEGALGAAEQEV
                     VASRSALESANEESHTLQVRLTEAAGSRRSIVERVEAEWHRAFEQLLETAPVLDLDLE
                     TLQAESARITEALESIGPVNALAVEEHAEEVKRLQFLTGQRDDLVGARQSLMQAIREI
                     DGTARTMFLETFTAVQGNFHRVFQTLFGGGECELRLANPDDPLESEIDIHAAPRGKRT
                     QRIHLLSSGERTLVAVSLLFSIYLTKPSPFCLMDEVDAPLDDANVGRFTRLLDEFKSG
                     TQFLVITHNPRTMQAADAVYGVTMQEPGVSTIVGVRLAEGEHARVPERERAQG"
BASE COUNT          451 a         1224 c         1197 g          520 t
ORIGIN      
        1 tggtgggact agcgccgggg cgagcgccgc aggctcattg atccaccacg cgggccccgg
       61 acggcacctt gaactcgaag gtgctgtggg ggacgcggcg gttcacccgc agattggaga
      121 gcgccagggt ccggagcgcc ccgctcttct cggtgatctc cagtcggcgg ggcagtccgt
      181 cctggcggtc gagccacagc acggcgcgtt cgaacggcag gtcgggcacc gcaggcgtca
      241 gctcgaccac gtccactccc cgggcgccca ccttgtcctc ccgcacatac gtcgcctggt
      301 accgctcggc gggccggtcg agaaaccagg cgagcaggtt gtacccgtac accggaccgc
      361 cgctcggcgc cttcaggcgg agcacctggt cgggcaccgt gctcggcgtg tacacccaca
      421 catgctcgcc gtcgatcacc acggcctcgc tgggcggctc gctgaagcgc atcgagagct
      481 tcgcgggccc cgcctgcacc agcgtgccgc ggctctcggc gctgtcgatc atcgggttgt
      541 cgatgatctg cacgaagtcg gcggtgagac tggagagtga tcggtacacc cgggacgacc
      601 ggccgacgat ggactcggcg tcctgcgcgt gggcggtcgc cgtggcggcg cggccgagca
      661 ggcaggcgag gagcagcctc atgcccgggc ccccgccgcc tcgggaagcc gccggccgat
      721 tgcctcgacg atgagccgcg cctcgcgcat cagccgctcg aactgctcgg ggtagaggct
      781 ctgggcgccg tcggagagcg cgcggtccgg agcggggtgg acctccacca gcagcccgtc
      841 ggcccccgcc gccacggccg cgcgggccat ggggatcacc atgtcgcggt gccccgtacc
      901 gtggctgggg tcggcaacga tcggcaggtg ggagaggccg tgcaccaccg ggatcgcgct
      961 cagatcgaac aggttccggg tgctggtgtc gaagccgcgg acgccgcgct cacagaggat
     1021 cacgtcgggg ttgccctcgg ccaggatgta ctccgccgag aggagcagct cctgaatggt
     1081 ggccgagagt ccgcgcttga ggaggacggg cttccgggcg cggcctgcgt gcttgagcag
     1141 ggagtagttc tgcatgttgc gcgcgccgat ctggacgatg tcggccacct ccagcacgta
     1201 gtcgaggccc tcggcgtcca tcgcctcggt gacgatgagc agcccggtct cttcccgcgc
     1261 ccgggccagc agcttcagcc cggatcggcc cagtccctgg aaggagtagg gcgagctgcg
     1321 cggcttgaag gccccggcgc ggagcacggt ggcgccggcc tctcggaccg catgggccgc
     1381 gtcgaggatc tggcgctcgc tctccacgga gcaggggccc gccatgacga gtacgtcctc
     1441 cccgccgatg ctcaggccgc cgggcaggcg cacgatggtc gactcgccct tccattcccg
     1501 ggaaacttgc ttgtagggct tggtgacgtg gaggatttcc tggaccccgg ggagcgcttc
     1561 caggcgggaa gaatccaccc ggccgtcgtt gccgacgagc ccgacggtgg tgcgctgctt
     1621 gccgggcatg gggcgcgcct gatagcccat gtcttcgatg gtggcgatca cccggtcgat
     1681 gtcttcctgc ggcgccccgt ggcgcatcac gacgagcatc cggaactcct ccgcctgacc
     1741 tgtcagcccg cgccggacct gtcagcccga gcgcagcgag ggatcctgca ggccgtcggc
     1801 ggtgaccggc ggagaagatc cctcacggcg ctcggaatga cgttgcgtgc ttagcaggat
     1861 ccgcgccaga ggctggggcc tcagccctgg gcccgctcgc gctccggcac cctggcgtgc
     1921 tccccttcgg ccagccggac gcccacgatg gtggacacac cgggctcctg catggtcacg
     1981 ccgtacacgg cgtccgcggc ctgcatcgtc cgcggattgt gagtgatgac caggaactgg
     2041 gtgccgctct tgaactcgtc gagcaggcgg gtgaaccggc ccacattggc gtcgtccagg
     2101 ggggcgtcca cctcgtccat gaggcagaac gggctgggct tggtcaggta gatgctgaag
     2161 agcagcgaca ccgccaccag ggtccgctcg cccgaggaga gcaggtggat ccgctgggtg
     2221 cgcttgcccc tcggcgcggc gtggatgtcg atctcactct cgagcggatc gtcggggttg
     2281 gccaggcgga gctcgcactc cccgccgccg aacagcgtct ggaatacgcg gtggaaattg
     2341 ccctgcaccg cggtgaaggt ctcgaggaac atggtgcgcg cggtgccgtc gatctcccgg
     2401 atcgcctgca tcagggactg gcgggcaccg accaggtcgt cgcgctggcc ggtcaggaac
     2461 tggagtcgct tcacctcttc ggcgtgctcc tcgaccgcca gcgcgttcac cggtccgatg
     2521 gactcgagcg cctcggtgat cctggccgac tccgcctgga gcgtctcgag gtcgaggtcc
     2581 aggacggggg cggtctcgag gagctgctcg aaggcgcgat gccactcggc ttctacccgc
     2641 tccacgatgc tgcggcgact gccggccgcc tccgtgagcc ggacctgcaa cgtgtggctc
     2701 tcctcgttgg cggattcgag agcggaccgg gacgcgacca cctcctgttc cgcggcgccg
     2761 agggcgccct ccgcgtcggc cagggcggcc tcggcatcgg ccgccgcgtg ctccaactgg
     2821 tgcagctcga cctcgcgctc ggcgcgggct tcgcgccact caccctgctg cttcaccagc
     2881 ccggcctcgt cgagatcgag ctgggccagc tcgcccgcga gcgcggtcgc cgccgattcg
     2941 gcctcgaccc gcatgctctc cgcccgggcg aggcgctcct cggcggagcg aagcccgccc
     3001 gccacgtgcg cctcgcgcac ctgccagtgg acgcgctgct cccgagccgc ctcctgctcg
     3061 ccctccagct ccgcgagtcg ggaccgtgag gtacccagct cctcgtccag ccggttccgc
     3121 gccagctcgc cctcgaccag tgcggtgtcg atctcggtca gacgctgctc ggagcgggaa
     3181 agccgctcgg acagccgcgc cagctgcgac tccgagtcgg ccgactcgcg cgtcaggttg
     3241 gccgcctggc gggatgcgtc ctcccgcgcc gccgcggcct ggcgctcagc ctcccgcgcc
     3301 tgatcggcgg cggccaccgc ttccgccagt gcgcgctccc gctgcgccaa ggtctcgacc
     3361 gtgtccctga ccgcggtctc cgccgccgcc ac
//
LOCUS       DASUYN010000397         3292 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1887073, whole genome shotgun sequence.
ACCESSION   DASUYN010000397 DASUYN010000000
VERSION     DASUYN010000397.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3292)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3292)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3292
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1887073"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1026
                     /locus_tag="VF061_07745"
     CDS             <1..1026
                     /locus_tag="VF061_07745"
                     /inference="COORDINATES: protein motif:HMM:NF014647.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BMP family protein"
                     /protein_id="HEX6669436.1"
                     /translation="ELGLWRRGSSMLAGVCFYAAGMMSLGGCNRAETADGPRVGLITP
                     GSIADAAWNSGAWDGLQRIRDSLGLVVSHIEARTPSEQAEALRTYAAQAYDLVFAHGF
                     EFQDPAERVSAQYPETIFIITSGRRAVGNVAPLIFRLEEASYLAGMVAGGLSRSHVLG
                     FVGGIELPPIEAAYQGWVNGARAVDPDVTTRKIYLNSFDDAAAGREAALALIRVGADM
                     FHHNADAAALGVFQAAKESEGVYVFGSNDDQTRLAPERVVGSAVIDLPRAFLTVAKEV
                     KEGTYRPRVEAFGLASGVVRYVPNPALESMVHETLRVRVQAAADSIADGTLVAAPRPA
                     SMQALVP"
     gene            1023..1796
                     /locus_tag="VF061_07750"
     CDS             1023..1796
                     /locus_tag="VF061_07750"
                     /inference="COORDINATES: protein motif:HMM:TIGR00486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0051540 - metal cluster binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HEX6669437.1"
                     /translation="MSGAPLADIVAYSDEFLRIRAVADERNAVNGLQVENSGTVRSIV
                     AAVDASQATITGAPQGSLLVVHHGLFWDGNLPVTGRRYRRLSTLLENDVALYSAHIPL
                     DLHPEVGNNVVLADRLGIEVEGWFGDYRGSPIGVWGFAPGRLGPRDAFVDEVNRALGT
                     FAPGARLIAGGPDRVSRVGIISGGAGNMIGEARAAGLDTYITGEGPHHTYFDAVEWGL
                     NVIYAGHYATETLGVQALASHLGDRFDLEWEFHDHPTGL"
     gene            1796..3253
                     /locus_tag="VF061_07755"
     CDS             1796..3253
                     /locus_tag="VF061_07755"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX6669438.1"
                     /translation="MPALELVGIQRKFGSVHALRGADFTLLPGEVHALLGENGAGKTT
                     LMQIAGGLVHPDAGEVRVEGVPHARLSPRLARGLGIGMVHQHFTSVPALTVAENVALA
                     ARWPVAPAALRLRVRETSARVGLPLDPDTRVEQLSVGLRQRLEIVKTLASDVRILLLD
                     EPTAVLAPREVEDLVRVIRRFTAAGGSAVLITHKLDEALAAADRVTVLRRGRAVLTAR
                     VGETTAAALTAAMIGEADVDEPPAPAAGAARALGDTVVRLEDVEVARESGLGIALRGA
                     SVTVAAGEIIGVAAVEGNGQRELLRTIAGRLRPVRGFRQVREPVAFIPEDRTTEGLIP
                     EMTITENIVLGSSGSEPWLRGPTVDWRVAEAWTAGLMEDLAVAAPGPWVPAASLSGGN
                     QQRVVAGRELSRRPAVVVAENPTRGLDIRATAAIHGRLRRAASEGAAVVFHSSDLDEV
                     IGLATRILVATKGQLIEAPAAATRDALGALMLAGG"
BASE COUNT          457 a         1097 c         1246 g          492 t
ORIGIN      
        1 gagttggggc tgtggagaag aggttcctcc atgctggcag gcgtatgctt ttatgctgcc
       61 ggcatgatgt cgctaggtgg atgcaatcgg gctgagacag ctgacggccc gcgggttgga
      121 ctcatcaccc ccggctcgat cgcggatgct gcctggaact cgggtgcgtg ggacggcctc
      181 cagcggatcc gggactcgct gggcctggtg gtcagccaca tcgaggcgcg gaccccctcg
      241 gagcaggccg aggcgttgcg gacctatgcg gcccaggcct acgacttggt cttcgcccac
      301 gggttcgagt ttcaggatcc tgccgagcgc gtctcggccc agtatcccga gaccatcttc
      361 atcatcacct cgggccggcg ggccgttggg aacgtggccc cgctgatctt ccggctggag
      421 gaggcgagtt acctggccgg gatggtggcc gggggcctca gccggagcca cgtcctcggg
      481 ttcgtgggag gcatagagct gccgccgatc gaggcggcct atcaggggtg ggtgaacggc
      541 gcgcgcgcgg tagatccgga cgtgacgacc aggaagatct acctcaacag cttcgacgac
      601 gcggcggctg ggcgggaggc ggcgctagcc ctgatccggg ttggcgccga catgttccac
      661 cacaacgcgg atgcggccgc gctgggcgtc ttccaggctg ccaaggagag cgaaggcgtc
      721 tacgtcttcg gctccaacga cgaccagacc cgcctggcgc ccgagcgggt ggtgggcagc
      781 gcggtcatcg accttccccg ggccttcctg acggtggcga aggaggtgaa agaaggaacc
      841 taccggcccc gggtcgaggc cttcggcctg gcgagcggag tggtccgcta cgtccccaac
      901 ccggcattgg agtccatggt gcacgagacc ctgcgtgtcc gggtccaggc cgcggccgac
      961 tccatcgccg acggaacgct cgtggcggcg ccgcgcccgg cgtccatgca ggcgctggtc
     1021 ccatgagcgg ggcgccgctg gccgacatcg tcgcctacag cgacgagttc ctgcggatcc
     1081 gcgcggtggc ggacgagcgc aacgccgtca acgggcttca ggtggagaac agtggcacgg
     1141 tgcggagcat cgtcgccgcc gtggatgcgt cacaggcgac catcaccggg gccccgcagg
     1201 gctcgttgct cgtggtgcac cacgggctgt tctgggacgg caacctgccg gtcacaggcc
     1261 gccgctaccg gcggctctcg accctcctcg agaatgacgt ggccctctac tccgcccaca
     1321 tcccgctcga cctccacccg gaagtcggca acaacgtggt cctggccgac cggctcggca
     1381 tcgaggtgga ggggtggttc ggcgattaca ggggaagtcc gatcggcgtc tggggcttcg
     1441 cgcccggccg gctcgggccc agggacgcgt tcgtcgacga ggtgaatcgc gcgctgggga
     1501 ccttcgcccc cggcgcccgg ctgatcgcgg gggggccgga ccgggtctcc cgggtgggga
     1561 tcatctcggg cggcgcgggg aacatgatcg gcgaggcccg agccgcgggc ctcgacacct
     1621 acatcaccgg ggaagggcct caccacacct acttcgacgc ggtggagtgg ggcctcaacg
     1681 tcatctacgc cggccactac gccacggaga ccctcggcgt tcaggccctc gcgtcccatc
     1741 tcggcgaccg cttcgatctg gagtgggagt ttcacgacca cccgaccggt ctctgatgcc
     1801 ggctctggaa ctggtaggga tccagcggaa gttcggctcc gtgcacgcgc tgcgcggggc
     1861 cgatttcacg ttgctcccgg gcgaagtcca tgcgctcctg ggcgagaacg gggccggcaa
     1921 gacgacgctc atgcagatcg ccgggggcct ggttcacccc gatgccggcg aggtgcgggt
     1981 ggagggggtt ccccatgcga gactctcgcc gcggctcgcg cgaggcctgg gtatcgggat
     2041 ggtgcaccag cacttcacct ccgtgccggc gctcaccgtg gcggagaacg tggcgctggc
     2101 ggcgcgctgg ccggtggccc cggcggcgct ccggctccgg gtacgggaaa ccagtgcgcg
     2161 ggtcggcctt cccctcgacc ccgatacccg ggtcgagcag ctgagcgtcg gactgaggca
     2221 gcggctggag atcgtgaaga cgctcgcctc ggacgtgcgg atcctgctgc tcgacgagcc
     2281 gaccgccgtg ctggccccga gggaagtcga ggacctcgtt cgggtgatcc gccgctttac
     2341 ggccgcggga ggctcggcgg tgctcatcac ccacaagctg gacgaggcgc tcgccgctgc
     2401 cgaccgcgtg acggtgctgc ggcggggtcg ggccgtgctc acggcgcggg tcggcgagac
     2461 gaccgcggcg gccctgaccg cggccatgat cggagaggca gacgtcgacg agccgcccgc
     2521 gccggccgcc ggggcggccc gagccctcgg cgacacagtc gtgcggctcg aagacgtgga
     2581 ggtggcccgc gaaagcgggc tcggcatcgc gctgcgagga gcgtcggtga ccgtcgctgc
     2641 gggcgagatc atcggggtgg ctgcggtgga ggggaacggc cagcgcgagc tgctgcgcac
     2701 gatcgcggga cggctccgcc cggttcgcgg attccgccag gtgagggagc cggtcgcctt
     2761 cattcccgag gaccgcacca ccgagggtct gattcccgag atgacgatca cggagaacat
     2821 cgtgctgggc tcttcgggct ccgagccgtg gcttcggggg cccacggtgg actggcgcgt
     2881 cgcggaggcc tggacggcgg ggctgatgga ggacctggcg gtcgcggcgc cgggtccgtg
     2941 ggtgccggcc gcatcgctca gcgggggcaa tcagcagcgc gtggtggcgg gccgcgagtt
     3001 gtcccggcgg cccgccgtcg tcgtagcgga gaaccccacg cgaggcctgg acatccgggc
     3061 caccgccgcg atccatggcc gcctccgccg ggcggcctcg gagggggcgg ccgtcgtctt
     3121 ccactccagc gatctcgacg aggtgatcgg cctggccaca cgcattctgg tggcgacgaa
     3181 gggtcagttg atcgaggctc cggccgccgc cacgcgcgac gcactcggcg cgctcatgct
     3241 cgcgggcggt tgagccaggg tgcgcgccta cgggtggctg gtcggcgcgg ga
//
LOCUS       DASUYN010000398         3021 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_563624, whole genome shotgun sequence.
ACCESSION   DASUYN010000398 DASUYN010000000
VERSION     DASUYN010000398.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3021
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_563624"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..430
                     /locus_tag="VF061_07760"
     CDS             <1..430
                     /locus_tag="VF061_07760"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX6669439.1"
                     /translation="FAFAPVVGWLTDRLGRTPVILGGIALLLGACAVAGSAGHGSIQL
                     AVGMTLLGLGWSSTMVAGSTLLTESVPIELRASAQGLSDLTMGLAGALAGAFSGLVVE
                     VWGYPRLTLLAALATAPLILLLWWTVKVSGRVKLPAASQM"
     gene            578..1669
                     /locus_tag="VF061_07765"
     CDS             578..1669
                     /locus_tag="VF061_07765"
                     /inference="COORDINATES: protein motif:HMM:NF024575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669440.1"
                     /translation="MPLPPLAGHLETRRRLARSARAGTLPQVLLFTGPTGVGKQRLAL
                     WLAQLVLCERGGDEPCATCRSCRLVDGLAHADVHWFVPIPRSKAGDPDKQVEEAGETL
                     AGIMEDRRKRPLYTPADGMASHTIATVRLLQRRMSLTSVEGGRRVFIVGEADRLVPQE
                     SSPEAANATLKLLEEPPAGALIVLTTLDPRRVLPTIRSRAAPVRLNRLRDDEVRSFLA
                     QHTEPRWSREKVEERVAMAAGSIGVALCEDEDSGKAYRSAEQLLAAVVEGRGAALERA
                     LGQGTFAARGEFAAMLDALADTLGEAARGAMGQPVRRSVPAPLLRHRSPAPLLQAMEK
                     VAAAREAAAGNVNPQVLLAVLGEDLAEVL"
     gene            1666..2130
                     /gene="moaC"
                     /locus_tag="VF061_07770"
     CDS             1666..2130
                     /gene="moaC"
                     /locus_tag="VF061_07770"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HEX6669441.1"
                     /translation="MKLSHLDAEGRARMVDVGDKPVSDRTAVATGAVRMSREAYELVA
                     GEGVPKGDVLTVAEVAGVMGAKRTGELIPLCHPLGLDHVQVEARLDPELPGVQVTAAA
                     RVTGRTGVEMEALTAVTVACLTVYDMVKAVDKGMVIQDVKLVGKAKRPAHNP"
     gene            2144..2845
                     /locus_tag="VF061_07775"
     CDS             2144..2845
                     /locus_tag="VF061_07775"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HEX6669442.1"
                     /translation="MLRPTDEYGERRGGFLERLLVRGVLLMVTVVVIGALAGWTKRVK
                     AADHVAAPDTRLVAHTLGTMEQQLTGTRGELELVKLQLERTSAILQNSAKYQIPADLA
                     EDIYDIALSEGIDPALGFQLVKVESGFKATARSPMAAYGYTQLQLPTARFYDSDVTVK
                     DLYDRETNLRIGFRFLRDLLEQFDHDMEVALVAYNRGPGKVAGILAAGGNPANGYAEA
                     VMEGWSTEGGAVGGK"
BASE COUNT          453 a          970 c         1120 g          478 t
ORIGIN      
        1 gttcgcgttc gcgcccgtgg ttggctggct caccgatcgg ctcgggcgga cgcccgtgat
       61 tctcgggggt attgcgctcc tcctcggggc ctgcgcggta gcaggcagtg ccggccacgg
      121 ctccatccag ctagccgtcg ggatgacgct gctcggactc ggctggtcga gcaccatggt
      181 ggcggggtcc acactgctga ctgagtcggt gccgatcgag ctgcgcgcct ccgcgcaggg
      241 cctctcggat ctgaccatgg gcctggccgg cgccctggca ggcgccttct cgggcctggt
      301 cgtcgaggta tgggggtatc cgcgcctgac cctgctcgcg gcgctggcga cagccccgct
      361 gatcctgctg ctctggtgga ccgtcaaagt ctcaggcaga gtgaagctgc ctgcagcttc
      421 ccagatgtga gtggatgttc acttgtggcg ggcggtgctg ctcgccgcca cactttgtgg
      481 ggcaaagccg tgagatcgag cgtgcctaac atgttgttga aaaacatgtt acaatagccg
      541 tgctgcgttt tcccccttcg ctccttagct tccccccatg cctttacccc ccttggccgg
      601 acacctcgag acccgacgcc gtctcgcaag atcggcccgt gccgggactt tgccccaggt
      661 cctgctgttc accggaccga cgggggtggg gaagcagcgg ctggccctct ggctggcgca
      721 gttggtgctc tgtgaacggg gtggtgacga gccttgcgct acctgccggt cctgccggct
      781 ggtggacggt ctggcccacg cggacgtcca ctggttcgtg cccatcccgc gctccaaggc
      841 cggggatccg gacaagcagg tggaggaggc gggggagacg ctggcgggga tcatggagga
      901 tcggcggaag cggccgctct atacccccgc ggatggcatg gcgagtcaca cgatcgccac
      961 cgtgcggctg ctccagcggc gaatgtcgct gacctcggtg gagggtggcc gccgggtgtt
     1021 catcgtcggc gaggcggaca ggctggtgcc gcaggagtcg agtcccgagg cggccaacgc
     1081 cacgctgaag ctgttggagg agccgcccgc gggcgcgctc atcgtgctga cgacgctgga
     1141 cccgcgccgg gtgctgccca cgatccgctc ccgggcggcg ccggtgcggc tcaaccggct
     1201 gcgcgacgac gaagtgcgga gtttcctggc gcagcacacc gagccgcgct ggagccggga
     1261 gaaggtcgaa gagcgcgtag cgatggccgc cggctccatc ggggtcgcgt tgtgcgagga
     1321 cgaggactcg ggcaaggcgt atcgctccgc cgagcagttg ctggcggcgg tggtcgaggg
     1381 tcgcggtgcc gcgctcgagc gcgcgctggg ccagggcacc ttcgcggccc gcggcgagtt
     1441 cgccgcgatg ctggacgcgc tcgccgatac cctgggcgag gcggcgcgcg gcgcgatggg
     1501 ccagccggtc cggcggagcg ttccggcccc gctgctgcgc caccgcagtc ccgccccgct
     1561 gctccaggcc atggagaagg tggcggcggc gcgcgaggcg gcggcgggca acgtgaaccc
     1621 gcaggtcctc ctggccgtac tgggcgagga cctggcggag gtgctgtgaa gctgagccat
     1681 ctggacgcgg agggccgcgc ccgcatggtg gacgtggggg acaagccggt gagcgatcgg
     1741 accgcggttg ccaccggcgc ggtgcggatg tcgcgcgagg cctacgagct ggtggccggc
     1801 gagggcgtgc ccaagggtga cgtcctcacg gtggcggaag tggccggggt gatgggggcc
     1861 aagcggaccg gggagctgat cccgctctgc cacccccttg gcctcgacca cgtacaagtc
     1921 gaagccaggc ttgaccctga gttgccgggg gtacaggtga cggcggccgc ccgggtgacc
     1981 gggcgcacag gcgtggagat ggaggcgctc acggcggtaa cggtggcatg ccttactgtg
     2041 tatgacatgg tcaaggcggt ggataagggg atggtgatcc aggacgtaaa gctggtgggc
     2101 aaggcgaagc ggcctgctca caacccatag acaggaggtt ggcttgctga gaccgaccga
     2161 cgagtacggc gagcgacgtg gcgggttcct ggagcggctc ctcgtgagag gcgtgctgct
     2221 catggtgacc gtcgtcgtca tcggcgccct ggccggctgg acgaagcgag tgaaggccgc
     2281 ggatcacgtg gcggcccccg acacgcggct ggtggcccac accctgggca ccatggagca
     2341 gcagctcacc ggcactcggg gcgagctcga gctggtgaag cttcagctgg agcgcaccag
     2401 cgccatcctc cagaattcgg ccaagtacca gatcccggcc gatctggcgg aggacatcta
     2461 cgacatcgcc ctgagcgagg gcatcgaccc cgccctcggc tttcagctgg tgaaggtgga
     2521 gagcgggttc aaggccaccg cgcggtcgcc gatggcggcc tacggctaca cccagctcca
     2581 gctccccacg gcacggttct acgattccga cgtgaccgtg aaggatctct acgatcgcga
     2641 gaccaatctc cggatcggct tccgcttcct gcgggacctg ctggagcagt tcgaccacga
     2701 catggaggtc gcgctggtgg cctacaaccg tggtccgggc aaggtcgccg gcatcctggc
     2761 ggccggaggc aacccggcga acgggtacgc ggaggcggtc atggaggggt ggagcactga
     2821 gggaggagcg gtagggggca agtagaagcg gggtgtcacc ctgaacgaag tgaagggggc
     2881 catatcgagc atggccccct tcgctgtgct cagggtgaca cccgccccct caccccggaa
     2941 tcttcaatgc ctcccccgcc cgcaacgtct ccccgaccga caacccgttt acccgccgga
     3001 gctcggtgac gctgacgcca t
//
LOCUS       DASUYN010000399         2735 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1666414, whole genome shotgun sequence.
ACCESSION   DASUYN010000399 DASUYN010000000
VERSION     DASUYN010000399.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2735)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2735)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2735
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1666414"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2532)
                     /locus_tag="VF061_07780"
     CDS             complement(<1..2532)
                     /locus_tag="VF061_07780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669443.1"
                     /translation="MDSASAQARKKDRPDRPQITHADRAAAAARAKAAGFVAAEAALA
                     AAAVPGDAPRYFSHPNYANSPLPVVDGTVVSVGNPLVDREYATDFATPVGTLGPVFVA
                     LPAAVLPDGFVQSFQTWNQASAGGSPTPSAGSLFHAYILRPTANPNEYSVVFDSGLLT
                     VPPLSNAVSEVATFPVPNIAVQANDILAFYGQGVPVDTTGGPDILSTPANTQPLQDGT
                     ITLGSEAFPIYPQARTYSFAAQLLDMSANGIVVSGGMRKFVDALPDIPVAVPDTTTFP
                     GSDYYVIELIQYTQQMHADLPPTTLRGYRQVNMGGTPVRYLGPTIVATKDRPVRILFQ
                     NHLPTGEGGNLFIPVDTTVMGSGFTADGHMMDPTMMDPQKPMCSQLGKEAMVASGHCY
                     AENRATLHLHGGISPWISDGTPHQWITPAGETTDYPQGVSVVPVPDMTSVDSGNPTDG
                     EMTFFYTNQQSARLMFYHDHSWGITRLNVYAGEAAPYVITDDTEKALVNGGILPGPAD
                     TIPLVIQDKTFVPSQEQLALQDETWDVARWGGLGSLWMPHVYSPAQNPGDASGVNQYG
                     RWAYGPWFWPPTTNIDNDPIDNPYWCSVDGFRADGVTPCEPCDPEAKWCEPPIMPGVP
                     FLSMGMESFQDTPVVNGAAYPTITLDPKPYRFRVLNAANDRFFNLSIYKAVDANGVPC
                     DAANPSPAPERTGVACTEVLLNPAEVAAALDDPAGVFPTPVAGTEGPAWIQFGTEGGF
                     LPAPVVVPPHVTTWVTDPTVFNAGNVDQHSLLLGPAERADVVVDLSAFAGQTLILYND
                     APAAFPARDPRYDYYTGNDDLRDAGGTPSTLPGYGPNTRTVMQIKV"
BASE COUNT          399 a          885 c          984 g          467 t
ORIGIN      
        1 caccttgatc tgcatgacgg tgcgcgtgtt cgggccgtag ccagggagcg tggacggcgt
       61 gccgcccgcg tccctgagat catcattgcc ggtgtagtag tcgtagcgcg ggtcgcgcgc
      121 cgggaaggcg gccggggcgt cgttgtagag gatcagcgtc tggccggcga acgcggagag
      181 atcgaccacc acgtccgccc gctcggccgg gccgagcagc aatgaatgct ggtccacgtt
      241 gccggcgttg aacaccgtcg ggtccgtcac ccaggtggtg acgtgcggcg ggacgaccac
      301 cggggccggg aggaagccgc cctccgtgcc gaactggatc caggctgggc cttccgtgcc
      361 cgccaccggg gtcgggaaga ctcccgccgg gtcgtcgagc gcggccgcca cctcggcggg
      421 gttcaagagc acctcggtgc acgcgactcc cgtgcgctcc ggagccggac tgggattggc
      481 ggcatcgcac ggcaccccat tggcgtcgac ggccttgtag atcgacaggt tgaagaagcg
      541 gtcgttggcc gcattcagga cgcggaagcg atagggcttc gggtcgagcg tgatcgtcgg
      601 gtaagccgcg ccgttgacga ccggcgtgtc ctggaaggac tccatcccca tcgagaggaa
      661 cggcaccccg ggcatgatcg gcggctcgca ccacttcgcc tcgggatcac agggctcgca
      721 cggggtgacg ccgtcggccc tgaagccatc gacgctgcac caatacggat tgtcgatcgg
      781 atcgttgtcg atgttcgtcg tcggcggcca gaaccagggc ccgtacgccc agcggccgta
      841 ctggttcacg ccggaggcgt cgcccgggtt ctgcgcggga gagtagacgt gcggcatcca
      901 caggctgccg agtccgcccc acctggcgac atcccaggtc tcgtcctgca gggcgagctg
      961 ctcctggctc ggcacgaacg tcttgtcctg gatgacgagc gggatggtgt ccgccggccc
     1021 agggaggatg ccgccgttga ccagcgcctt ctcggtatcg tcggtgatca cgtacggcgc
     1081 agcttcgccc gcatagacgt tgagccgggt gatgccccag gaatggtcgt ggtagaacat
     1141 cagccgcgcg ctctgctggt tcgtgtagaa gaaggtcatc tccccgtcag tagggttccc
     1201 cgagtcgacg ctggtcatgt ctgggacggg aaccacgctc acgccctggg ggtaatccgt
     1261 ggtctcgccg gcgggagtga tccactggtg cggcgtgccg tcgctgatcc agggcgagat
     1321 tccgccgtgc aggtgcagcg tggcgcggtt ctccgcgtag cagtgacccg aggcaaccat
     1381 cgcctccttc ccgagctggc tgcacatcgg cttctgcggg tccatcatcg tcggatccat
     1441 catgtggccg tcggccgtga acccagagcc catcacggtg gtatcgaccg ggatgaacag
     1501 gttcccgccc tcgccggtcg ggaggtggtt ctggaacagg atccgcacgg gccggtcctt
     1561 ggtcgccacg atcgtcggcc ccaggtaccg gacgggagtt ccgcccatgt tcacctggcg
     1621 ataaccgcgc agcgtggtgg gcggtaggtc cgcgtgcatc tgctgcgtgt actggatcag
     1681 ctcgatgacg taatagtccg agcccgggaa ggtcgtggtg tcggggacgg cgaccgggat
     1741 gtcgggcagc gcgtcgacga acttccgcat cccgccggag acgacgatgc cgttcgcgga
     1801 catgtccagg agctgggccg cgaaggaata cgtgcgtgcc tgcgggtaga tggggaacgc
     1861 ctcgctgccg agcgtgatcg tgccgtcctg caggggctgc gtgttggcgg gggtgctcag
     1921 gatgtccgga ccgcctgtgg tatcgacggg aacgccctgc ccgtagaagg cgaggatgtc
     1981 attcgcctgc acggcgatgt tcggcaccgg gaacgtggcg acctcgctca ccgcgttgct
     2041 cagcggtggg accgtgagca gtccgctgtc gaagacgaca ctgtattcgt tcgggttggc
     2101 ggtgggccgc aggatgtagg cgtggaacag gctcccggcc gacggcgtgg ggcttcctcc
     2161 ggccgatgcc tggttccagg tctggaagct ctgaacgaag ccatccggca gcaccgccgc
     2221 cgggagggcc acgaacacgg ggccgagcgt ccccaccggc gtcgcgaagt cggtcgcgta
     2281 ttcccggtcg acgagcgggt tcccgacgga gacgaccgtg ccgtcgacca ccggcagcgg
     2341 actgttcgcg tagttcgggt gcgagaagta tcgcggcgcg tcgccgggga ccgccgccgc
     2401 cgcaagagcg gcctcggccg cgacgaagcc ggccgccttc gcccgagcgg ccgcggccgc
     2461 gcgatccgcg tgcgtgatct ggggccgatc cggtctgtcc ttcttgcgcg cctgggcgga
     2521 cgcggagtcc atgccccaaa cgagcgtcag cgcgatcacc gcgcagcgcc atcccattgc
     2581 tccgtgcttc atcccgtccc ccttcgctgt gctctgctct gcttcggtgg tcgctttgtc
     2641 ggcaaccggc ctgttcgatc gtcgtgcctc ggcgctcgcg actgggggtc agcccacggc
     2701 gagagccgcg gggcgcggat gtctgcggat cactc
//
LOCUS       DASUYN010000400         3123 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1888344, whole genome shotgun sequence.
ACCESSION   DASUYN010000400 DASUYN010000000
VERSION     DASUYN010000400.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3123
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1888344"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..299)
                     /locus_tag="VF061_07785"
     CDS             complement(<1..299)
                     /locus_tag="VF061_07785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669444.1"
                     /translation="MTFKPAFWRPAALVASALNLVGVGLAAGSAEPWHAGIHATLALA
                     FWSWAQRLRPTPGTGAPVSRTDDLELEVGELRRELSEAQERLDFTERMLAQGLEA"
     gene            411..953
                     /locus_tag="VF061_07790"
     CDS             411..953
                     /locus_tag="VF061_07790"
                     /inference="COORDINATES: protein motif:HMM:NF014373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MgtC/SapB family protein"
                     /protein_id="HEX6669445.1"
                     /translation="MIPSLFSTETLDAALRLGSAVAIGGLVGLDRGLRQKPAGLRTHA
                     LVALGAALMTYTGIELAPAEPGAITRVLQGVIAGVGFLGGGVILRDAQDQRVRGLTTA
                     ASIWIVAGLGMACGAGHWRTGLLASVFTLVVLMGGRHIEQLLASWSDADADEPFEQPE
                     RSSPGPVASRRWAARRMRVP"
     gene            complement(966..1280)
                     /locus_tag="VF061_07795"
     CDS             complement(966..1280)
                     /locus_tag="VF061_07795"
                     /inference="COORDINATES: protein motif:HMM:NF014025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HEX6669446.1"
                     /translation="MFGTARSFAGASTSRSPCSCVSWGLPRAEGEPRPCRAVGQRAAV
                     PVGAVVLAWLASAVILYFVGDLRKVLGERGLTAMEQLMGMPLVIVVVEMLMSGLAEYL
                     AR"
     gene            complement(1195..1596)
                     /locus_tag="VF061_07800"
     CDS             complement(1195..1596)
                     /locus_tag="VF061_07800"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030638 - polyketide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ester cyclase"
                     /protein_id="HEX6669447.1"
                     /translation="MSVERTRDAMERYLNSAHRDLSMMAEDVVFTAMATGEEHRGVEG
                     VRRMLEHVYHQAFDATAETRNRIYAENHAVLEADFVGTHIGAFAGVPATNRQVRVPLC
                     VVYDLRDGKIVRGRVYLEVPVLLRQLGTSAS"
     gene            complement(1672..2304)
                     /locus_tag="VF061_07805"
     CDS             complement(1672..2304)
                     /locus_tag="VF061_07805"
                     /inference="COORDINATES: protein motif:HMM:NF018178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1080 domain-containing protein"
                     /protein_id="HEX6669448.1"
                     /translation="MRPTQTAAGGWRPLFDGRSLDAWRGYRLDRAPDGWQVVEGAITR
                     VAPAGDLITRDTFGDFELTLEWMIAAGGNSGVMYRVTEAAAHTYQTGPEMQVLDDARH
                     PDGRSRLTAAGAVYGLYPAPPRVVKPAGQWNAARIVARGNHVEHWLNGVQLASYVIGS
                     RDWVARVGASKFREWPGYGRAGAGHIALQDHGDWVAYRNIGILTLAPAAD"
     gene            2768..>3123
                     /locus_tag="VF061_07810"
     CDS             2768..>3123
                     /locus_tag="VF061_07810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HEX6669449.1"
                     /translation="MAMFRDRSWISLALTVPTVLWGHMLPEAVGFRPPPVPGARWIPA
                     VFGTLVFLYGGRPFLEGAVRELRARLPGMMTLISLAITVAFGFSLAVTLGLRGMPLWE
                     ELATLVTIMVLGHWIE"
BASE COUNT          461 a         1138 c         1061 g          463 t
ORIGIN      
        1 ctcgcctcca ggccctgcgc cagcatccgc tcggtgaagt ccagccgctc ctgcgcctcg
       61 ctcagctccc gccggagctc gccgacctcc agctcgagat catcggtccg cgagacggga
      121 gccccggtgc ccggcgtcgg ccggagccgc tgggcccagg accagaaggc cagcgccagg
      181 gtggcgtgaa tcccggcgtg ccacggctcg gcggagccgg ccgccaggcc gacacccacg
      241 aggttgaggg cgctggccac cagagcggcc ggacgccaga acgccggttt gaaggtcata
      301 gcgaaggtac gcggcacggc cggccaaggt ttcagcctga accgccccag gcggtacagg
      361 aattgcccct cctgagcgca tcacagccca gcgccgacgc gccgaccctg atgattccat
      421 ctctgttctc caccgaaacc ctcgacgcgg cgctccgcct cggctctgcc gtggcgatcg
      481 gcggcctggt cggtctcgac cgtggcctgc ggcagaagcc cgccggattg cgcacccatg
      541 cgctcgtggc cctcggcgcc gcgctcatga cctacaccgg tatcgagctg gcccctgcgg
      601 agccgggcgc catcacccgc gtgctccagg gcgtgatcgc gggcgttggc tttctcggcg
      661 ggggggtcat ccttcgggac gcgcaggacc agcgggtccg gggactgacg accgcggcct
      721 ccatctggat cgtcgccggc ctgggcatgg cctgtggggc ggggcactgg cgcaccgggc
      781 tgctggcctc ggtgttcacc ctcgtggtgc tcatgggcgg ccgccacatc gagcagctgc
      841 tggcctcgtg gagcgacgcg gatgcggatg agcccttcga gcagccggag cggagctccc
      901 ccggtccggt ggcctctcgg cgctgggcgg cgcggcggat gcgggtgccc tagagccgca
      961 ccgcgtcacc gtgccaggta ctcggcgagg cccgacatca gcatctccac caccacgatg
     1021 acgagcggca tgcccatcaa ctgctccatc gccgtcaagc cccgctcccc cagcaccttc
     1081 cgcaggtctc ccacgaagta gaggatcacc gccgaggcga gccacgccag caccaccgcg
     1141 ccgacaggaa cagcggcacg ctgcccaacc gctcggcaag ggcgaggctc tccttcagct
     1201 cgcggaagtc cccagctgac gcaggagcac ggggacctcg aggtagacgc gcccgcgaac
     1261 gatcttgccg tcccgaagat cgtagaccac gcacagaggg acccggacct gccggttggt
     1321 ggcgggtacc cccgcgaacg ccccgatatg ggtacccacg aagtcggcct cgagcacggc
     1381 gtggttctcg gcgtagatgc ggttgcgggt ttcggcggtc gcatcgaagg cctgatgata
     1441 gacgtgctcc agcatgcgcc tcacgccctc gaccccccgg tgctcctccc cggtcgccat
     1501 cgcggtgaag accacgtcct ccgccatcat gctgagatct cggtgggccg agttcaggta
     1561 gcgctccatc gcgtcacggg tgcgttccac gctcatggtc gtctccgggg tgtctggggt
     1621 tgatgcggcg accgtcgttg tccggcgagg cgcccgcgcc gttgcatggg ctcagtcggc
     1681 ggccggcgcg agcgtcagga tgccgatgtt ccggtaggcg acccagtcgc catgatcctg
     1741 gagcgcgatg tggcccgccc ccgcccgccc gtagccgggc cactccctga acttgctcgc
     1801 gccgacccgc gctacccagt cgcggctgcc gatcacatag ctcgcgagct ggacgccgtt
     1861 gagccagtgc tcgacgtgat tgccgcgggc cacgatgcgc gccgcgttcc actggccggc
     1921 cggcttcacc acgcgaggtg gcgcgggata cagcccgtac acggcgccgg ccgcggtcag
     1981 cctcgaacgg ccatccgggt gccgtgcgtc gtcgagcacc tgcatctcgg gaccggtctg
     2041 gtaggtgtgg gcggcggctt cggtgacccg atacatcacc ccgctgttgc cgcccgcggc
     2101 gatcatccat tcgagcgtga gttcgaagtc cccgaaggtg tcgcgggtga tcagatcacc
     2161 cgccggcgcc acccgggtga tggcgccctc caccacctgc cagccgtccg gcgcacggtc
     2221 gaggcgatag cctcgccagg cgtcgagcga gcggccgtcg aacagcggcc gccaaccacc
     2281 ggcagccgtc tgcgtcggtc tcatcgacac ggcaggcggc gcggggcctg tctcacggga
     2341 gcatcccgcc agagtgagga ggagcagcca cgggagtctc aacgcggcga gaccgggccg
     2401 tggaggaccc ccaaagtccg agctgccgcg cactcgacct cgagcgcaga agagacgcta
     2461 ctgtgcgtca tctccccagg ctacggcccc agcgagagcc cggcaacagg gagccgagcg
     2521 cgcgggccgg ggtgcggtgt tgccacgcat agggggaggg ggtatattgg cctaatctct
     2581 gagggcgcct atgccgaacc acccaattca ccaccaccat agccacccgg gcgcaaccgc
     2641 cggtcgcgct gagcacgggg tatccccacc agccgaaccc ggtacccccg agcatccgaa
     2701 gcgccagggc ggccaccacc atgcccatgc ggagcagggg gagcatgaca agcatgccgg
     2761 gcacagcgtg gccatgtttc gcgaccgatc ctggatcagc ctcgccctca ccgtcccaac
     2821 tgttctctgg ggccatatgc tgcccgaagc cgtcggcttc cggccgcctc cggtgccagg
     2881 ggcgcgctgg attcccgcgg tcttcggcac gctggtcttc ctctacggcg gccgcccctt
     2941 cctcgagggt gcggtgcgtg agctgcgggc ccgccttccg gggatgatga cgctgatctc
     3001 gctcgccatc accgtggcgt tcgggttcag cctcgcggtc acgctgggcc tccgcgggat
     3061 gccgctctgg gaggagctgg cgacgctggt cacgatcatg gtgctggggc actggatcga
     3121 gat
//
LOCUS       DASUYN010000401         2530 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1667032, whole genome shotgun sequence.
ACCESSION   DASUYN010000401 DASUYN010000000
VERSION     DASUYN010000401.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2530)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2530)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2530
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1667032"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(42..1862)
                     /locus_tag="VF061_07815"
     CDS             complement(42..1862)
                     /locus_tag="VF061_07815"
                     /inference="COORDINATES: protein motif:HMM:NF012926.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 15 protein"
                     /protein_id="HEX6669450.1"
                     /translation="MRGADGRYPPIDAHAAIGDLQTIALVGLDGRIDFLCLPDFDSPS
                     VFAALLDADRGGEFAITPELAEPRCRQLYLPDTNMVLTRFLCDEGVAEISDFMPIHAA
                     PHTSRVMRRVKTVRGEIRFRVRCAPRFDYARASHRVEPAADGVRFVGAEGTVLRLSAS
                     VPLTVEQEDAVARLTLRAGETATFILEQVTDNASFATNLDRYVTDSFKDTMNFWRSWV
                     SRSTYTGRWRDEVHRSALTLKLLHSRWSGSIVAAATFGLPETIGGSRNWDYRYSWIRD
                     ASFTLYALTRLGMTDETGAYIAWLDRRCWACRPETLRTLYTLKGDEELPEQALDHLEG
                     YRGSRPVRIGNAASDQLQLDIYGELLDAIYLYDKYGEVTSHGLWGRIEGIVDWVAGNW
                     QLPDDGLWEKRSGRREYLYSRILCWVAIDRGIRLAVKRSYPAPLERWRAARDAIYREV
                     HEHFWDPEQQSFVGIKGTDQLDASCLVMPLVRFISATDPRWRSTMAAVGRHLVEDSLV
                     YRYEFEGPESDGLEGAEGSFSICSFWYIECLSRMGDLQQARFLFEKMLGYANHVGLYA
                     EEIGLAGEHLGNFPQAFTHLALISAAYDLDRRLSGAGVEG"
     gene            complement(1859..>2530)
                     /locus_tag="VF061_07820"
     CDS             complement(1859..>2530)
                     /locus_tag="VF061_07820"
                     /inference="COORDINATES: protein motif:HMM:NF028222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEX6669451.1"
                     /translation="GVLTEPLTIAEKGLRQYLEVRRRLPWLEHAGDEELTRGRHALVL
                     GAGPVGLLGCLLLRLHGFRVTVFARSRPPNPRSEIARSAGATYLSGEERPIGKAVASL
                     EPVDLVYEAAGASQLAFDTLEHLGPNGIFVFTGVPGRKHRADIAGDAIMRSLVLRNQT
                     VLGTVNAGRRDFEAAVRDLGRIRERWPGTLEALITGRWPMERFCERAGAPEGIKDVIA
                     VGDAT"
BASE COUNT          383 a          906 c          880 g          361 t
ORIGIN      
        1 gctggggccc gggaccggta acctggtcgg gcgccctcga ctcacccctc cacccccgcg
       61 cccgacagcc gccggtcgag atcgtacgcc gcgctgatga gcgcgagatg ggtgaacgcc
      121 tggggaaagt tccccaggtg ctcgcccgcc agcccgatct cctccgcgta cagtccgacg
      181 tggttggcgt agccgagcat cttctcgaac aggaaccggg cctgctgcag gtcgcccatg
      241 cgcgacaggc actcgatgta ccagaacgag cagatggaga agctgccttc cgctccctcc
      301 aggccgtcgc tctcggggcc ctcgaactcg tagcggtaca ccagcgagtc ctcgaccagg
      361 tggcgcccga ccgcggccat ggtggaccgc cagcgcgggt cggtcgccga gatgaagcgc
      421 acgagcggca tgaccaggca ggaggcgtcg agctggtcgg tgcccttgat gcccacgaac
      481 gactgctgct ccggatccca gaagtgctcg tgaacctccc ggtagatcgc gtcccgggcc
      541 gcgcgccacc gctcgagcgg ggccggatag gagcgcttca ccgccagccg gatgccccgg
      601 tcgatcgcca cccagcagag tatgcgagag tagaggtact cgcggcgtcc gctccgcttc
      661 tcccagaggc cgtcgtcggg gagctgccag ttccccgcca cccagtccac gattccctcg
      721 atccgccccc agaggccgtg gctcgtcacc tcgccgtact tgtcgtagag gtagatggcg
      781 tcgagcagct cgccgtagat gtcgagctgg agctggtcgg aggcggcgtt gccgatcctc
      841 accggccgcg agccccggta gccctcgagg tgatcgaggg cctgctccgg cagctcctcg
      901 tctcccttca gcgtgtacag cgtgcgcagc gtctccgggc ggcaggccca acagcggcga
      961 tcgagccagg cgatgtacgc gccggtctcg tcggtcatgc ccagccgggt gagcgcgtac
     1021 agggtgaacg aggcatcgcg gatccaggag tagcggtagt cccagttccg gctcccgccg
     1081 atggtctccg gcaggccgaa ggtcgccgcc gccacgatgg acccgctcca gcgggaatgg
     1141 agcagcttga gggtgagcgc ggagcggtgg acctcgtcgc gccagcggcc ggtataggtc
     1201 gagcggctca cccaggaccg ccagaagttc atcgtgtcct tgaacgagtc ggtgacgtac
     1261 cggtccaggt tggtcgcgaa ggaggcgttg tcggtcacct gctcgaggat gaacgtcgcc
     1321 gtctcgccgg cccggagcgt gagccgagcc accgcgtcct cctgctctac cgtgagcggc
     1381 acggacgcgg agagccggag tacggtgccc tcggctccga cgaaccggac cccgtcggcg
     1441 gcgggctcca cccggtggct cgcacgggcg tagtcgaagc gcggcgcgca gcgcacccgg
     1501 aagcggatct caccccggac ggtcttgacc cggcgcatga cccggctggt gtgcggggcc
     1561 gcatgaatcg gcatgaagtc ggagatctcc gccacccctt cgtcgcagag gaagcgggtg
     1621 agcaccatgt tggtgtcggg gagatagagc tgccggcagc gaggctccgc cagctcgggg
     1681 gtgatggcga actcgccgcc gcgatccgcg tcgaggagcg ccgcgaacac cgacggtgaa
     1741 tcgaagtccg gcaggcagag gaagtcgatc cgcccgtcca gccccacgag cgcgatcgtc
     1801 tggagatcgc cgatcgcggc gtgcgcgtcg atcggcgggt agcgaccgtc cgcccctctc
     1861 acgtcgcgtc tcccaccgcg atcacgtcct tgattccctc cggcgcaccg gcccgctcgc
     1921 agaaccgctc catgggccag cggccggtga tgagcgcctc gagcgtgccg ggccagcgct
     1981 cgcggatccg ccccaggtct cgcaccgccg cctcgaagtc gcgccggccc gcgttcaccg
     2041 tgccgaggac ggtctggttc cggagcacga ggctccgcat gatcgcgtcg ccggcgatgt
     2101 cggcccggtg cttccggccg ggcacgccgg tgaagacgaa gattccgttc gggcccagat
     2161 gctccagcgt gtcgaaggcg agctgcgacg cgcccgcggc ctcgtacacg agatccaccg
     2221 gctccagcga cgcgaccgcc ttgccgatcg ggcgctcctc gccggagagg taggtggcgc
     2281 ccgccgacct cgcgatctcc gagcgcgggt tgggcggccg gctcctggcg aacaccgtca
     2341 cccgaaaccc gtggaggcgc agcagcaggc agcccagcag ccccaccgga cccgcgccga
     2401 ggacgagcgc atgccgcccg cgggtgagct cctcgtcgcc ggcgtgctcc agccacggca
     2461 gccggcggcg cacctcgagg tactgccgca gccctttctc ggcgatggtg agcggctcgg
     2521 tgagcacgcc
//
LOCUS       DASUYN010000402         3253 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_345742, whole genome shotgun sequence.
ACCESSION   DASUYN010000402 DASUYN010000000
VERSION     DASUYN010000402.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3253)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3253)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3253
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_345742"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1911
                     /locus_tag="VF061_07825"
     CDS             <1..1911
                     /locus_tag="VF061_07825"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF004349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004832 - valine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006438 - valyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HEX6669452.1"
                     /translation="VVADEAVDPAFGSGAVKVTPAHDPTDFEIGRRHGLPSVDVLTPE
                     ARMSLAAPDRFQGQDRFEARRQVVRELEGLGLLEKVENHRHAVGHCYRCGTVIEPRLS
                     EQWFVRMEPLARPALARYRDGTLQFIPERRGEDYARWLEGIRDWCISRQLWWGHRIPV
                     WYCENERCARVSVSRTDPTACPDCGGAVRQDEDVLDTWFSSWLVPFTSLGWPERSPDL
                     AAFYPGHTLVSSPDIIFFWVARMIMSGLEFMGEPPYTRIYLHGVVRDTQHRKMSKSLG
                     NGIDPLEIVERYGADALRYSLVTGMSVGTDLILDPEDLETSFAPGRNFANKLWNAGRF
                     ILSNLDGTPRPLGGPASNVVRREELTLADRWIIARCDATVREATESYERFRLNEAAAA
                     VYRFLWSDLADWYIEQIKPRLYGDAPGGDVARSVAVQTFDVALRLLHPVMPFVTETLW
                     RRFPGRSDDASISVAPWPLPDTRAEDPEALREFGLVQELVGAIRAIRAEYGVQPGQAV
                     RAVVSRSDTGDGALHRERLTVSRLAKVSSLTFGEPQERVGGHAVLSDGTAVFVPLGDA
                     IDVNRECQRLGGELKRLTQLVESQDRKLGNEQFVARAPADVVRREREKAATWREQREV
                     LSRKLELLGCGS"
     gene            1899..3221
                     /locus_tag="VF061_07830"
     CDS             1899..3221
                     /locus_tag="VF061_07830"
                     /inference="COORDINATES: protein motif:HMM:NF024603.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEX6669453.1"
                     /translation="MRLLTRRIPASLTLLSLACARMEPPPGGPPDAAAPQLVATVPDS
                     FQVLPDFDDDVEFRFDEVISEGGAPSQGSGTGDLERLVILSPSTAVPRVRWRRNRITV
                     RPDEGWQPDRVYRVELLPGVTDLRRNRLARGAMVTFSTGAPAPRTTFEGLVVDWSSAR
                     PAQGALVVALRLPDSLPYRGLADSTGRFSLGPLPAGEYVVSGVLDENRNHFADPREAF
                     DSVRVTRSDSTLELWAFVHDTTPPRIRTVTSSDSTAATVELTQPLDPRQRLQPSAVRL
                     SLLPDSTPVRVSSILPKPLDDSLRARRSPADTTARDTTAARDSAPAARPRPGARPGPR
                     RQQVEQLTSRPALSNQLVLRPAAPWPPGARYTVEIRGVRNVTGVSGDVVGTLVIPERV
                     ARDTLAPADTLRQPGDTVPVKPAPRKPAPTKPAPTRPAPTQPAPARPR"
BASE COUNT          448 a         1187 c         1152 g          466 t
ORIGIN      
        1 gtggtggccg atgaggcggt ggatcccgcg ttcggatccg gcgcggtgaa ggtcacgccg
       61 gcccacgatc ccaccgattt cgagatcggc cggcggcacg gtctcccctc ggtggacgtg
      121 ctgacgcccg aggcccgcat gagtctcgcg gcgccggacc gcttccaggg ccaggaccgg
      181 ttcgaggcgc gccggcaggt cgtgcgggag ctggaggggc tgggcctgct ggagaaggtg
      241 gagaaccacc gccacgccgt ggggcactgc taccgctgcg gaaccgtgat cgagccccgt
      301 ttgtcggagc aatggttcgt gcggatggag ccgctcgccc ggccggccct cgcgcgctat
      361 cgcgacggga cgctgcagtt catccccgaa cggcgcggcg aggactacgc ccgctggctg
      421 gaaggcatcc gcgactggtg catctcgcgg cagctctggt ggggtcaccg cattccggtg
      481 tggtactgcg agaacgagcg ctgcgcccgg gtgagcgtga gccggacgga tccgaccgcc
      541 tgccccgact gcgggggggc cgtgcgccag gacgaggacg tgctcgacac ctggttctcc
      601 tcctggctgg tgcctttcac cagcctcggc tggccggagc gcagcccgga cctggccgcg
      661 ttctatcccg gtcacaccct ggtctcctcg cccgacatca tcttcttctg ggtggcgagg
      721 atgatcatgt cggggctcga gttcatgggg gagccgccct acacccgcat ctatctccac
      781 ggcgtggtgc gagacaccca acaccgcaag atgtccaagt ccctggggaa cggcatcgac
      841 ccgctggaga tagtggaacg gtacggggcg gacgcactgc gctattccct ggtgacgggg
      901 atgtccgtcg gcaccgatct catcctggac cccgaggacc tggagacctc gttcgcgccg
      961 ggacgaaatt tcgccaacaa gctctggaat gccggccgct tcatcctctc gaacctcgac
     1021 ggcacgcccc ggcccctcgg tggaccggcg tcgaacgtgg tccggcggga ggagctcaca
     1081 ctggcggacc ggtggatcat cgcccgctgc gacgcgaccg tgcgcgaggc caccgagagc
     1141 tacgagcggt tccggctgaa cgaggcggcc gcggccgtgt atcgcttcct ctggagcgac
     1201 ctcgccgact ggtacatcga gcagatcaag ccccgactct acggcgatgc ccccggcggc
     1261 gacgtggcgc ggtcggtggc cgtccagacc ttcgacgtgg cgctccgact gctgcatccg
     1321 gtgatgccgt tcgtcaccga gacgctgtgg cgccgcttcc ccggccggtc cgacgacgcc
     1381 tcgatttcgg tcgccccctg gccgctgccg gacacgcgcg cggaagaccc ggaggcgctc
     1441 cgcgagttcg ggctggtgca ggagctggtg ggcgccatcc gggcgattcg cgcggagtac
     1501 ggtgtgcagc cgggccaggc ggtgcgcgcg gtggtgagcc ggtccgatac cggcgacggc
     1561 gcgctccatc gagagcgcct cacggtcagc cggctcgcca aggtgtcgag cctcaccttc
     1621 ggcgagccgc aggagcgagt cgggggccac gcggtcctgt ccgacggcac cgcggtgttc
     1681 gtgcctctgg gcgacgcgat cgatgtgaat cgcgagtgcc agcgactcgg tggcgagctg
     1741 aagcggctga cgcagctggt ggagtcacag gaccgcaagc tggggaacga gcagttcgtc
     1801 gcccgcgcgc ccgcggatgt ggtccggcgc gagcgggaga aggcggccac gtggcgggag
     1861 cagcgcgagg tcctgagccg gaagctcgag ctgctggggt gcggctcctg acccgtcgca
     1921 ttcctgcatc gctcaccctc ctgtcgctcg cctgcgcgcg gatggagccg ccgccgggtg
     1981 gtcctcccga cgccgctgcc ccgcagctgg tcgccaccgt gccggactcg ttccaggtcc
     2041 tccccgactt cgatgacgat gtggagttcc ggttcgacga ggtgatctcc gaaggcggag
     2101 cgcccagcca gggatccgga accggcgacc tggagcggct ggtcatcctc tccccgagca
     2161 cggcggtgcc gcgggttcgc tggcgccgca accggatcac ggtcaggccc gacgagggct
     2221 ggcagcccga tcgcgtgtat cgggtggagc tactgcccgg cgtcaccgat ctccgccgca
     2281 accggctcgc ccggggcgca atggtgacgt tcagcaccgg ggccccggcg cctcgcacca
     2341 cgttcgaggg tctggtggtg gactggagca gcgcgcgacc cgcccagggc gcgctggtcg
     2401 tggcgctccg cctgcccgac agcctgccgt accgcggctt ggccgactcc accggccggt
     2461 tcagcctggg cccgctgccg gccggtgagt acgtggtgag cggggtgctg gacgagaacc
     2521 ggaaccactt cgccgatccc cgtgaggcat tcgacagcgt gagggtcacc cgcagcgatt
     2581 ccacgctcga actctgggcc ttcgtgcacg acaccacccc gccccgcatc cggaccgtca
     2641 cctcgagcga cagcacggcg gccacggtcg agctcaccca gccgctcgat ccacgccagc
     2701 gcctccagcc ctccgccgtg cggctctcgc tgctgccgga ttccaccccg gtgcgggtga
     2761 gctcgattct tcccaagccg ctggacgaca gcctgcgtgc gcgccgctcc ccggcggaca
     2821 cgaccgctcg ggacaccact gcggcacgcg actcggcgcc cgccgcgcgc ccgaggcccg
     2881 gggcccggcc cggtccccgc cgccagcagg tggagcagct gaccagccgc ccggcgctca
     2941 gcaaccagct cgtgctccgg ccggccgctc cgtggccgcc gggcgcgcgc tataccgtgg
     3001 agatccgcgg cgtgcgaaac gtcaccggtg tctccggcga cgtcgtcggc acgctggtga
     3061 tccccgagcg ggtggcgcgg gacaccctgg ccccggcgga caccctgcgg caaccgggcg
     3121 acaccgtccc ggtcaagccc gcgccacgga agcccgcgcc caccaagccg gcaccgacca
     3181 gaccggcacc gacccagccg gcccccgcgc ggccccggtg aacgaccgtc gccgcacgct
     3241 gccctcggtc gac
//
LOCUS       DASUYN010000403         4839 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1006998, whole genome shotgun sequence.
ACCESSION   DASUYN010000403 DASUYN010000000
VERSION     DASUYN010000403.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4839)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4839)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4839
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1006998"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..700)
                     /locus_tag="VF061_07835"
     CDS             complement(<1..700)
                     /locus_tag="VF061_07835"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF013206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEX6669454.1"
                     /translation="MAPFALALLSGCAGGASVAPEPAVGIGRDWPLKGKARVTEGSSA
                     MVVSGHPLASRIGRDVLRAGGNAVDAAVAVGFALAVVHPEAGNIGGGGFMVLRAAGGE
                     VRALDYRETAPGGASRDMYLDASGEPTELSVTGHLSAGVPGSPAGLTEAHRQLGRLPF
                     DSVILPAIRLAREGFEVDEYRNESIRSDSARLALFPASAASFLPGGRPPEPGTRLVQP
                     DLAATLEAIRQEGAD"
     gene            835..1761
                     /gene="murQ"
                     /locus_tag="VF061_07840"
     CDS             835..1761
                     /gene="murQ"
                     /locus_tag="VF061_07840"
                     /EC_number="4.2.1.126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016835 - carbon-oxygen lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009254 - peptidoglycan turnover [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramic acid 6-phosphate etherase"
                     /protein_id="HEX6669455.1"
                     /translation="MADDYLDTRLTERRNPRTSTIDTASALEIVDLIGAEDATVPGAV
                     ARAREEMARAVDLIEQAFRAGGRLVYVGAGTSGRLGVLDAAECPPTFGTPPEMVVGVI
                     AGGYPALVKSVEGAEDDVNAGIGEMDARRVGPDDVVVGIAASGTTPFVRAALSRAQTL
                     GARTVIVTCSEPPKLLRDTCDVTILVLVGPEVVTGSTRMKAGTATKLVLNTLTTAAMI
                     RLGKTYGNLMVDLRAWNDKLIDRSERIVMESTGLPREEARGVIEAADGRVKTAIVMAR
                     RRVSRDEAERLLVEHEGRLRAIVGDPPPVRTA"
     gene            1758..2882
                     /locus_tag="VF061_07845"
     CDS             1758..2882
                     /locus_tag="VF061_07845"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: protein motif:HMM:NF007148.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HEX6669456.1"
                     /translation="MSARPMVAVGLMSGTSLDGVDAALVRIEGPTHATLLDFITRPYD
                     EAERAELRAALDRGARAEPAAFARLHVRLADWAADAVQILLAQSKTPATELGFIAFPG
                     QTVWHEPPTVTWQLGEPAVLAERFGVRVVSNFRSRDVAAGGQGAPLVPMADVLLFAAP
                     DRARVLLNLGGMANITYVPRRAQEQGVLAFDTGPGVAVIDGVARLVDRRRGFDRDGLI
                     AAQGRANEAMLADLLGDPFFAAAPPKSTGRERFGDDYARKLHRRVPGADGVATAVELT
                     ARSVAAAVDRWVPGDAEVVASGGGCHHPGLMAALARCLDALPGSHPLRRFDELFFPGD
                     AKEAVAFALLGYLTLHGQPGNVPAATGATGPRVLGSVTPA"
     gene            2882..4324
                     /locus_tag="VF061_07850"
     CDS             2882..4324
                     /locus_tag="VF061_07850"
                     /inference="COORDINATES: protein motif:HMM:NF013126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /protein_id="HEX6669457.1"
                     /translation="MPDDLQPGRLVLPALRARPNGSFAHEAAAIADALEIGVGGFIIF
                     GGNVESVRRLTTDLTRRAERPLLLASDLERGAGQQIEGLTDFPPPLALAALGDPGVAR
                     WAGAVTAQEARAVGINWVFAPVADLDVLPENPIVQTRAFGDDPNRVATLVRSWIEGCQ
                     GAGALACAKHYPGHGRTAVDSHVTLPSVEAPSETLLESDLVPFTVAAESGVASMMTAH
                     VAFPALDASGTAATLSAPILDGLRRSLGFDGLVVTDALIMDGALTGRRESDAAVQALQ
                     AGVDLLLYPKDPRRIRDALSGAVDSGALSRERLDEALRRYEHALAVASRPTPPVRRGP
                     FESAAALADELLRQGMVRGTTPELSGPLDLVVVDDDVGGPYAPSPSDWVARALGAERV
                     GRYTGGSRVVLVFAEPRAWKGRSGFSDGSREALASYAPDADLIVLFGHPRLLEQIPSE
                     APVLLAWHRQRLMQEAVARWLGERVKDVSP"
     gene            complement(4370..>4839)
                     /locus_tag="VF061_07855"
     CDS             complement(4370..>4839)
                     /locus_tag="VF061_07855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669458.1"
                     /translation="TGRLIATLAGAALGGLLATRIGLFRALWTMGLVQLLSSLGYAFA
                     AAAAPDIGIISAAALFENFAAGLGTAAFLAFLMSVCERRYAATQFALLTAVYALSRWA
                     VGLTSGVLAEWLGFANYFLLTFAIGVPAYGLLPWIRNAGRDDGGTERVTEVSP"
BASE COUNT          657 a         1766 c         1791 g          625 t
ORIGIN      
        1 cgtcggcccc ctcctgccgg atggcctcca gcgtggcggc gagatcgggt tgcaccagac
       61 gcgtgcccgg ctcagggggg cgcccgccgg ggaggaagct cgcggccgag gcggggaaca
      121 gcgcgaggcg ggcgctgtcg ctgcggatgg actcgttccg gtactcgtcc acctcgaatc
      181 cttcgcgcgc gagtcggatg gcgggcagga tcaccgagtc gaacgggagc cggcccagct
      241 gcctgtgggc ctccgtgagg ccggcggggg agccggggac gccggccgag aggtggcccg
      301 tgacgctcag ctcagtgggc tcgccgctcg cgtcgaggta catgtcccgg gaggcgccgc
      361 cgggggcggt ctcgcggtag tcgagggcgc gtacctcgcc gcccgccgcc cgcagcacca
      421 tgaacccgcc gccgccgatg ttgccggcct cgggatgcac caccgccagc gcgaatccca
      481 ccgcgaccgc cgcgtccacc gcgttgccgc cggcgcggag cacgtcgcga ccgatccggc
      541 tcgcgagcgg atgcccggag accaccatgg ccgagctgcc ctcggtcacc cgtgctttcc
      601 ccttgagggg ccagtccctg ccgatcccca cggccggctc gggcgccacg gaggcgccgc
      661 cggcacagcc ggacaggaga gcgagtgcga acggggccac gaatggtcgg cggaaaggca
      721 cggaatcctc gcggagggat gaccagcaga gggagcgggg agttgccccc gctgttcgac
      781 gccgtctaat ttagctgccg gccgacggtt ggaaaccatc accccactgc ccgcgtggct
      841 gacgactacc tcgacacgcg cctgaccgag cggcgcaacc cccgtacctc gacgatagac
      901 accgcttccg cgctcgagat cgtggatctc atcggcgccg aggatgcgac cgtgcccggg
      961 gcggtggccc gcgcgcgcga ggagatggcc cgggcggtgg acctgatcga gcaggcgttc
     1021 cgcgccggcg ggagactggt ctatgtcggc gcgggaacca gcggccggct gggtgtgctc
     1081 gacgccgccg agtgcccgcc gaccttcggc accccgccgg agatggtggt cggcgtgatc
     1141 gcgggcggct acccagcgct ggtgaagtcg gtcgagggag ccgaggacga cgtgaacgcc
     1201 ggcatcgggg agatggacgc gcgccgggtc gggcccgacg acgtcgtggt cgggatcgcc
     1261 gccagcggca ccacgccgtt cgtccgcgcc gcgctctccc gggcgcagac cctcggcgcg
     1321 cgcaccgtga tcgtgacctg ctccgagccg cccaagctgc tgcgcgacac ctgcgacgtc
     1381 accatcctgg tgctggtggg cccggaggtg gtgaccggct cgacccggat gaaggccggc
     1441 accgcgacca agctggtgct caacacgctg accaccgcgg ccatgatccg gctgggcaag
     1501 acctacggca acctgatggt ggacctccgg gcctggaacg acaagctgat cgaccgcagc
     1561 gagcgcatcg tgatggagag caccggcctg ccgcgagagg aggcgcgcgg ggtgatcgag
     1621 gccgccgacg ggcgggtgaa gaccgcgatc gtgatggctc ggcgccgggt ctcgcgcgac
     1681 gaggccgagc gcctgctggt ggagcacgag gggcgcctgc gcgccatcgt gggcgacccc
     1741 ccgcccgtgc gcaccgcgtg agcgcgcggc ccatggtcgc cgtcggcctc atgtcgggca
     1801 cctcgctcga cggggtggac gccgccctgg tccgcatcga agggcccacc catgccacct
     1861 tgctcgattt catcacccgc ccctacgacg aggccgagcg ggcggagctg cgcgcggcgc
     1921 tcgatcgcgg cgcacgggcg gagcccgccg ccttcgcccg gcttcacgtc cgcctcgccg
     1981 actgggcggc ggacgcggtg cagatcctcc tcgcccagtc caagaccccg gccaccgagc
     2041 tcgggttcat cgcctttccg gggcagaccg tctggcacga gccacccacg gtcacgtggc
     2101 agctggggga gcccgcggtg ctggcggaac gcttcggcgt gcgggtggtg agcaacttcc
     2161 ggtcgcgtga cgtcgccgcg ggagggcagg gcgccccctt ggttcccatg gccgacgtgc
     2221 tcctcttcgc cgcgccggat cgtgctcgcg tgctgctcaa cctcggcggg atggcgaaca
     2281 tcacctacgt cccccggcgg gcacaggagc agggcgtgct ggcgttcgac acgggccccg
     2341 gggtcgccgt gatcgacggc gtggcgcggc tggtggaccg ccgccggggg ttcgaccgcg
     2401 acgggctcat cgccgcgcag gggcgggcga acgaggcgat gctcgccgac ttgctgggcg
     2461 atcccttctt cgcggcggcg ccgcccaaga gcaccgggcg ggagcggttc ggcgacgact
     2521 acgcccgcaa gctccaccgc cgcgtgcccg gcgccgacgg agttgcgacc gcggtggagc
     2581 tcacggctcg aagcgtggcc gccgcggtgg accgctgggt gccgggcgac gccgaagtgg
     2641 tggcctccgg cggtggctgc catcatcccg gtctcatggc cgcgctggcg cgctgtctcg
     2701 acgcgctccc gggaagccac ccgctgcgac gcttcgacga gctcttcttt ccgggcgacg
     2761 cgaaggaggc ggtcgccttc gcgctgctcg gctacctcac gctgcacgga cagcccggca
     2821 acgtccccgc cgcgaccgga gccaccgggc cgagggttct cggctcggtg acacccgcct
     2881 gatgcccgac gacctccagc ccggccggct ggtcctgccc gcgctgcggg cccgacccaa
     2941 cgggagcttc gcccacgagg ccgccgccat cgccgacgcg ctggagatcg gcgtgggagg
     3001 cttcatcatc ttcggcggca acgtcgagag cgtgcggcgg ctgaccacgg atctgacgcg
     3061 gcgggcggag cggccgctcc tgctcgcctc ggacctggag cgcggcgcgg gacagcagat
     3121 cgaagggctc accgattttc ccccgccgct cgcgctcgcc gcgctggggg accccggcgt
     3181 ggcccggtgg gccggggcgg tcaccgcgca ggaggcgcgg gccgtcggca tcaactgggt
     3241 cttcgccccg gtggccgatc tcgacgtgct ccccgagaat cccatcgtgc agacccgcgc
     3301 cttcggcgac gatcccaacc gggtggccac gctggtgcgg agctggatcg agggctgcca
     3361 gggcgccggg gcgctcgcct gcgccaagca ctacccggga cacgggcgca ccgcggtgga
     3421 cagtcacgtc acgctgccct cggtggaggc gccgagcgag accctgctgg agagcgacct
     3481 ggtgccgttc acggtcgcgg cggaaagcgg tgtggcgtcc atgatgaccg cccacgtggc
     3541 gttcccggcg ctcgacgcct cgggcacggc ggccaccctc tcggccccga tcctggacgg
     3601 cctgcgacgg tcgctcgggt tcgacggcct cgtggtcacg gacgcgctca tcatggacgg
     3661 cgcgctcacg gggcggcgcg agtccgacgc cgcggtccag gcgctccagg ccggagtgga
     3721 tctgctgctc tacccgaagg atccgcgccg catacgagac gcgctgtcgg gggccgtaga
     3781 cagcggcgcg ctctcgcgcg agcggctgga cgaggcgctg cgccggtacg agcacgcgct
     3841 cgcggtcgcc agccggccca caccgccggt ccgccgcggg ccgttcgagt ccgccgccgc
     3901 gctggccgac gagctgctgc gccagggcat ggtgcggggc accacgcccg agctgtcggg
     3961 gccgctggat ctagtcgtgg tggacgacga cgtgggtggt ccgtacgcgc ccagtcccag
     4021 cgactgggtg gcccgagccc tcggcgccga gcgggtaggc cgctacaccg gaggcagccg
     4081 ggtggtgctc gtgttcgcgg agccgcgcgc ctggaaggga cgctcgggat tcagcgacgg
     4141 ctcccgcgaa gcgctggcca gctacgcgcc ggacgccgat ctcatcgttc tgttcggcca
     4201 tccaaggctg ctggagcaga ttcccagcga ggcccccgtg ctcctcgcct ggcaccgcca
     4261 gcggctgatg caggaggcgg tggcgcggtg gctgggggag cgggtgaagg acgtgtcacc
     4321 ctgaacgaag tgaaggggac cacctccggc atggtcccct tcgctgcgct cagggtgaca
     4381 cttctgtcac ccgctccgtc cccccgtcgt ccctcccggc gttccgaatc cacggcagca
     4441 gcccgtacgc cggcacccct attgcgaagg tcagcaggaa gtagttcgcg aacccgagcc
     4501 actccgcgag cacgcccgag gtgagcccca ccgcccagcg gctcagggca tagaccgcgg
     4561 tgagcagcgc gaactgggtc gccgcgtagc gccgctcgca gaccgacatc aggaacgcca
     4621 ggaaggccgc cgtccccagg cccgcggcga agttctcgaa caacgccgcc gcggagatga
     4681 ttccgatgtc cggcgccgcc gccgccgcga aggcgtagcc caggctcgac agcagctgca
     4741 ccagccccat cgtccagagc gcgcggaaga gcccgatccg ggtggccaac aatccgccga
     4801 gcgccgcacc ggcgagcgtg gcgatcagcc gccccgtgg
//
LOCUS       DASUYN010000404         2023 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1888732, whole genome shotgun sequence.
ACCESSION   DASUYN010000404 DASUYN010000000
VERSION     DASUYN010000404.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2023)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2023)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2023
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1888732"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1115
                     /gene="kdpA"
                     /locus_tag="VF061_07860"
     CDS             <1..1115
                     /gene="kdpA"
                     /locus_tag="VF061_07860"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031004 - potassium ion-transporting
                     ATPase complex [Evidence IEA];
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpA"
                     /protein_id="HEX6669459.1"
                     /translation="LEVTTLEGARQTIAMGPVASQEAIKQLGTNGGGFFNANAAHPFE
                     NPTPWSNFWSMLAIFAIPSALTWLLGRMTGRQRHGWAVWAVMAVLFLAGVTTAYWAEA
                     RGNPIHAERGLDLATTAGNPGGNMEGKEVRFGVANSALYATITTAASCGAVNSMHDSF
                     TPIGGLVPLVNIQLGEVIFGGVGAGLYGMLVMVVLTVFVAGLMVGRTPEYLGKRIQAR
                     EVQVVMLYVLIFPAVILGLSALSAVTPAGLKGLNNAGPHGLSELLYAFSSTTGNNGSA
                     FAGLTGSTYYYNTLFGFATLLGRFAMIVPMVALAGFLSERKIAPETAGTFPVTSPLFV
                     VLLIGVILIVGALTFFPVLSLGPIVEHFLMQAGSLL"
     gene            1118..>2023
                     /locus_tag="VF061_07865"
     CDS             1118..>2023
                     /locus_tag="VF061_07865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HEX6669460.1"
                     /translation="MPTAKHSLFHPPIVRRALWDSVSKLDPRHMVRNPVMSVVLVGAG
                     LTTGVLILDLLAGRHGNGFTLQLALWLWFTVLFANFAEAMAEGRGKAQAEALRGTRME
                     TRAKRLRDPANHLDFLSVFATELRRGDHVLVQAGELIPADGEVVEGVASVDESAVTGE
                     SAPVIRESGGDRSAVTGGTKILSDWLVVRITANPGETFIDRMIGLVEGASRQKTPNEI
                     ALTILLSGLTVVFLLAVVTLQPFAVYSGGAVAVPVLIALLVCLIPTTIGALLSAIGIA
                     GMDRLVQHNVLAMSGRAVEAAGDCST"
BASE COUNT          283 a          693 c          696 g          351 t
ORIGIN      
        1 atctcgaggt caccaccctg gagggtgcga ggcagacgat cgcgatgggt ccagtggcga
       61 gccaggaggc catcaagcag ctcggcacca acggcggcgg cttcttcaac gccaacgccg
      121 cgcatccgtt tgagaacccg acgccgtggt ccaacttctg gtccatgctc gccatcttcg
      181 cgatcccgtc ggccctgacc tggctcctcg gacggatgac cggccgccag cggcacgggt
      241 gggcggtctg ggcggtgatg gcggtcctgt tcctggccgg cgtcaccacc gcctattggg
      301 ccgaggcgcg cgggaacccg atccacgcgg agcggggact cgacctcgcg acgaccgccg
      361 gcaaccccgg cggcaacatg gagggcaagg aggtccgctt cggggtcgcc aatagcgcgc
      421 tctacgccac catcactacc gcggcctcgt gcggcgcggt gaactcgatg cacgactcgt
      481 tcaccccgat cggcggactc gtgccgctgg tcaacatcca gctcggcgag gtgatcttcg
      541 gcggcgtggg agcggggctc tacggcatgc tggtgatggt ggtgctgacc gtgttcgtcg
      601 ccgggctcat ggtgggccgc accccggagt acctgggcaa gcggatccag gcccgcgagg
      661 ttcaggtggt gatgctctac gtgctgatct tccccgcggt catcctgggg ctgtcggcac
      721 tgtcggcggt cacgccggca ggcctcaagg ggctcaacaa cgccgggccg cacgggctct
      781 cggagctctt gtacgccttc agctccacga ccggcaacaa cgggagcgcc ttcgccgggc
      841 tgacggggtc cacgtactac tacaacacgc ttttcggctt cgcgacgctg ctcggtcggt
      901 tcgccatgat cgtcccgatg gtggcgttgg cgggcttcct ctccgagcgc aagatcgcac
      961 ccgagacggc gggcaccttc cccgtcacca gcccgctctt cgtggtgctg ctgatcggcg
     1021 tcattctcat cgtcggcgcg ctcaccttct tccccgtgct gtcgctgggc ccgatcgtgg
     1081 aacactttct catgcaggcc gggagcctcc tctagccatg cccaccgcga agcattcgct
     1141 gtttcacccg ccgatcgtgc gccgagccct gtgggactcg gtgtccaagc tcgacccgcg
     1201 gcacatggtg cggaacccgg tgatgtccgt cgtgctggtc ggggccgggc tcaccaccgg
     1261 cgtgttgatc ctcgacctcc tggcggggcg ccacgggaac ggcttcaccc tccagctcgc
     1321 gctgtggctc tggttcacgg tcctcttcgc caacttcgcc gaggcgatgg ccgaaggccg
     1381 gggcaaggcg caggccgagg cgctccgcgg cacccgaatg gagacccggg cgaagcggtt
     1441 gcgggacccg gcgaatcacc tcgacttcct gtcggtgttc gcgaccgagc tgcgccgggg
     1501 cgaccacgtg ctggtgcagg ccggcgagct gattcccgcc gacggcgagg tggtcgaggg
     1561 cgtggcgtcg gtagacgagt ccgccgtcac gggtgaatcg gccccggtga tccgcgagtc
     1621 gggcggcgac cgctcagcgg tgaccggcgg gaccaaaatc ctctcggatt ggctggtcgt
     1681 ccggatcacc gcgaacccgg gagagacgtt cattgaccgg atgatcgggc tggtggaggg
     1741 tgccagtcgg cagaagaccc ccaacgagat cgcgctcacg atcctgctct cgggtctcac
     1801 cgtcgtcttc ctgctggcgg tggtaacgct ccagccgttc gcggtctaca gcggaggcgc
     1861 ggtggccgtg ccggtgctga tcgcgctgct ggtctgcctc atccccacca ccatcggcgc
     1921 gctgctctcc gcgatcggca tcgcggggat ggaccgcctg gtgcagcaca acgtgctcgc
     1981 gatgtcgggc cgcgcggtcg aggcagccgg cgactgttcg acg
//
LOCUS       DASUYN010000405         4088 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_123696, whole genome shotgun sequence.
ACCESSION   DASUYN010000405 DASUYN010000000
VERSION     DASUYN010000405.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4088
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_123696"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..273
                     /locus_tag="VF061_07870"
     CDS             <1..273
                     /locus_tag="VF061_07870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669461.1"
                     /translation="ELEARIASDARTLVQALGYDMNSIEFAIRDGVPYAIDFMNPAPD
                     MDIYSLTPIYFEWTVRAMADMAIRLAKKPRRQSRALKWDAAFTAGR"
     gene            284..1630
                     /locus_tag="VF061_07875"
     CDS             284..1630
                     /locus_tag="VF061_07875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="circularly permuted type 2 ATP-grasp protein"
                     /protein_id="HEX6669462.1"
                     /translation="MLEAIAHYHELLTDELAQASEAMLTDQLRRRGLVFGDRPLATVL
                     RPRFMTLDRYRLLQRRVRLLMSAFGKAYERAMADPAFRRQFRLTAWEERLIEHDAGLR
                     EPSPTSRLDAFVLDEAGTMALTEYNAETPAGAGYNDALVASFADLPIMRAFGRRYEAV
                     PLLARHGILHALLDTYEAWAGRRERPRVAIVDWPDVPTRSEFVLFQEYFTAIGIEAVI
                     ADPRELELREGRLHGPAGPVDLVYKRVLLAELVERCGEDTPLLRAVAAGAVCMVNPPR
                     CKVLHKKASLAVLSDERNQSLFTREEGAGIAAHIPWTRVMEERRTEHAGQPVELVPFV
                     LRGRERMVLKPNDDYGGAGIVLGWTVDAATWERAVADALARPSIVQERVEIQSEPYPN
                     VVDGHVVFADRMMDTAPFVCHGDYAEGCLTRLSTAALLNVTAGGGSTVPTFVVEQR"
     gene            1653..2816
                     /locus_tag="VF061_07880"
     CDS             1653..2816
                     /locus_tag="VF061_07880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0042398 - cellular modified amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylate-amine ligase"
                     /protein_id="HEX6669463.1"
                     /translation="MQAPSLTLGVEEEYQIIDPKTRELTSYITQILEADHRFLEQVKP
                     ELHQSIVEVGTKVCRTPGEVRTELVNLRGAVIELAARNGLKIAAAGTHPFSSWMQQEI
                     TPLERYLGVKEDMQDLAQRLLIFGTHVHIGIEDHDFLIDALNVSRYFLPHILCLSTSS
                     PFWLGRNTGLKSYRSIVFRGFPRTGVPRIVPSWAEYAHYLETLTSTGCIPNGSKIWWD
                     VRPNWNYPTLEFRICDVCTRVDEAVSVAAILQAIVAKLWKMRRENITFRTYSADLIEE
                     NKWRAARFGLGGKLIDFGKQQELPASVLIRELLEWFIGDVVDELGSRAEIEYAYRILE
                     EGSSADRQLATFRRTGELTAVVDHLIAETEEGVVGGTSPAEGALAPGSRTGGA"
     gene            2889..3635
                     /locus_tag="VF061_07885"
     CDS             2889..3635
                     /locus_tag="VF061_07885"
                     /inference="COORDINATES: protein motif:HMM:NF019342.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HEX6669464.1"
                     /translation="MRRRPLIGIPTQTLHSIDGIPAALPESWVMNQRYSRAVAAAGGL
                     PVMIPLLDEADVLQAIYDRLDGVLLPGGVDVDPATYGEAPLPTCGRLDPDRDRVELSL
                     ARWSREDGKPLFGLCRGLQIVNVALGGTLYQDIAAQRSDAIKHDFFPTAGYSRDHLAH
                     PVTVAAGTRLDAFVGTAPLRVNSMHHQAVKDLAPELVTTAVAPDGLIEAVESPDSHFL
                     LGVQWHPEALSDRDHRMHRLLAGFVEAAAR"
     gene            3670..>4088
                     /gene="selD"
                     /locus_tag="VF061_07890"
     CDS             3670..>4088
                     /gene="selD"
                     /locus_tag="VF061_07890"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015934631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004756 - selenide, water dikinase
                     activity [Evidence IEA];
                     GO_process: GO:0001887 - selenium compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HEX6669465.1"
                     /translation="MASQTLEQTPRIRLTAFSHGAGCACKLGPGELSEVLAHLPPIAD
                     PRVLVDAATRDDAAVFRLADDRALVATVDFFTPIVDDPRQWGAIAAANALSDVYAMGG
                     TPLFALNLVGWPRAKVPFELLGEVLRGAAGIAARANCA"
BASE COUNT          628 a         1430 c         1412 g          618 t
ORIGIN      
        1 gagctggaag cgcgcatcgc gagcgacgcg cggaccctgg tgcaggcgct gggctatgac
       61 atgaactcga tcgagttcgc gattcgggac ggggtgccct acgccatcga tttcatgaac
      121 ccggcacccg acatggacat ctactccctc acgcccatct acttcgagtg gaccgtccgg
      181 gcgatggccg acatggccat ccggctggcg aagaagccgc gccgtcagtc ccgcgcgctc
      241 aagtgggacg cggcgttcac ggccgggcgc tgagcgcggc gccgtgctgg aggcgatcgc
      301 ccactaccac gagctgctga ccgacgagct ggcccaggcg tccgaggcga tgctcaccga
      361 ccagctccgc cggcggggtc tcgtcttcgg cgaccggccg ttggcgacgg tgctccggcc
      421 gcggttcatg accctggacc gctaccgcct gctccagcgg cgggtgcggc tgctgatgag
      481 cgccttcggc aaggcgtacg agcgggccat ggccgacccg gcgttccggc ggcagtttcg
      541 gctgaccgcc tgggaggagc ggctgatcga gcacgacgcg ggactgcggg agccgagccc
      601 gacctcccgg ctcgacgcgt tcgtgctgga cgaggccggc accatggcgc tgaccgagta
      661 caacgcggag acgcccgccg gcgcggggta caacgacgca ctggtcgcct ccttcgccga
      721 cctcccgatc atgcgggcgt tcggccggcg gtacgaggcg gtgccgttgc tggcgcggca
      781 cggcatcctg cacgcactgc tcgacaccta cgaggcgtgg gcgggccggc gagagcggcc
      841 ccgagtggcc atcgtggact ggcccgacgt ccccacccgg agcgagttcg tgctgttcca
      901 ggagtacttc accgcgatcg gcatcgaggc ggtcatcgcc gatccgcgcg agctggagct
      961 gcgcgagggc cggcttcatg gccctgccgg gccggtggac ctggtgtaca agcgcgtgct
     1021 cctcgcggag ctggtggagc gctgcgggga ggacacccca ctcctccggg ccgtggccgc
     1081 aggggcggtg tgcatggtga accccccgcg ctgcaaggtc ctccacaaga aggcgagcct
     1141 ggcggtgctg tcggacgagc gcaaccaatc gctcttcacc cgggaagagg gggccggcat
     1201 cgccgcccac attccctgga cccgggtgat ggaggagcgc cggacggagc acgccggcca
     1261 gccggtggag ctggtgccgt tcgtgctgcg cggccgcgag cggatggtgc tcaagccgaa
     1321 cgacgactat ggcggcgccg gcatcgtgct cggatggacc gtggacgccg ccacgtggga
     1381 gcgggcggtg gcggacgcgc tcgcgcggcc ttccatcgtc caggagcggg tggagatcca
     1441 gtcggaaccc taccccaacg tggtggacgg ccacgtcgtc ttcgccgacc ggatgatgga
     1501 caccgctccc ttcgtgtgcc acggcgacta cgccgaaggc tgcctcacgc gcctctccac
     1561 cgccgccctg ctcaacgtga cggccggcgg aggctcgacc gtgccgacgt tcgtggtcga
     1621 gcagcggtaa cccgtccgga aaggagaccg ggatgcaggc cccctcactc acgctcgggg
     1681 tcgaggaaga gtaccagatc atcgatccca agacccggga gctgacctca tacatcaccc
     1741 agatcctgga ggcggaccac cgcttcctgg agcaggtgaa gcccgagctg caccagtcca
     1801 tcgtggaggt cggcaccaag gtctgccgca caccgggtga agtgcggacc gagctggtga
     1861 acctgcgcgg cgcggtgatc gagctggccg ccaggaacgg cctcaagatc gcggcggcgg
     1921 gcacccatcc gttctcgtcg tggatgcagc aggagatcac tcccctggag cgttacctgg
     1981 gggtgaagga ggacatgcag gatctggcac agcggctcct gatcttcggg acccacgtgc
     2041 acatcgggat cgaggaccac gacttcctga tcgacgcgtt gaacgtgtcc cggtacttcc
     2101 ttccccacat cctctgtctg tccaccagct cgcccttctg gctgggccgg aacacggggc
     2161 tcaagtccta ccgcagcatc gtcttccggg gctttccccg gaccggggtg ccccgcatcg
     2221 tgcccagctg ggcggagtac gcccactacc tcgagaccct gacctcgacc gggtgcattc
     2281 ctaacggctc gaagatctgg tgggacgtgc ggcccaactg gaactacccc accctcgagt
     2341 tccggatctg cgacgtgtgc acccgggtgg acgaggcggt ctcggtggcc gcgatcttgc
     2401 aagccatcgt ggccaagctg tggaagatgc ggcgggagaa catcaccttc cggacttatt
     2461 ccgccgacct gatcgaggag aacaagtggc gggccgcgcg gttcgggctc ggcggcaagc
     2521 tgatcgattt cggcaagcag caggagctgc cggcctcggt cctgatccgg gagctgctgg
     2581 agtggttcat cggcgacgtg gtggacgagc tgggcagccg ggccgagatc gagtatgcct
     2641 accggattct ggaggaaggc tccagcgccg accggcagct ggcgacgttc cgtcggaccg
     2701 gcgagctcac cgccgtggtg gatcacctga ttgcggagac ggaggagggg gtggtggggg
     2761 gaacctcacc ggccgaaggt gcgttggctc ccggaagccg gacgggtggg gcttagatta
     2821 ccggctgtcc actccgagtc ccggactccg gacgaccagc aggaccgaag tcatgcaagg
     2881 agcttgagtt gcgccgcaga ccgctgatcg gcatcccgac ccagacgctg cactccatcg
     2941 acggtatccc ggccgcgctg ccggagtcgt gggtgatgaa ccagcgctat tcccgcgccg
     3001 tcgcggctgc cggcgggctg ccggtgatga tccccctgtt ggacgaagcg gatgtgctcc
     3061 aggcgatcta cgaccggctg gacggggtcc tcctgcccgg cggtgtggac gtcgatccgg
     3121 ccacctacgg agaagctccc ctgccgacct gcggccggct cgaccccgac cgcgaccgcg
     3181 tcgagctgag tctggcgcgc tggtcgcggg aggacggcaa gccgctcttc gggctctgcc
     3241 gcgggctgca gatcgtcaac gtggcgctgg gcggcacgct ctaccaggac atcgcggccc
     3301 agcggagcga tgccatcaag cacgacttct tccccaccgc gggatattcc cgggaccacc
     3361 tcgcgcatcc ggtgaccgtc gcggccggca cccggctcga cgccttcgtc ggcaccgccc
     3421 cgctccgggt caacagcatg catcaccagg cggtcaagga tctggccccc gagctcgtca
     3481 ccaccgcggt ggcccccgat ggcctgatcg aggccgtgga atctccggac agtcatttcc
     3541 tgctcggcgt gcagtggcac cccgaagcgc tctccgaccg cgatcatcgc atgcaccgcc
     3601 tcctcgccgg cttcgtcgag gccgccgcgc ggtagtaact tccggtcgcc ccacacgacc
     3661 ggaagaggga tggcgagcca gactctcgag cagacacccc gcatcagact caccgcgttc
     3721 agccacggcg cgggctgcgc ctgcaagctc ggccccggtg agctgtccga ggtcctggcc
     3781 cacctgccgc ccatcgccga cccgcgggta ctggtggacg cggccacccg cgacgacgcc
     3841 gccgtcttcc gcctcgccga cgaccgggcg ctcgtcgcca ccgtggactt cttcaccccc
     3901 atcgtggacg atccccgcca gtggggcgcc atcgccgccg cgaacgccct gagcgacgtc
     3961 tacgccatgg gcggcacgcc gctcttcgcg ctcaacctcg tcggctggcc gcgcgccaaa
     4021 gtccccttcg agctcctcgg cgaggtgctg cgcggcgcgg cgggtatcgc ggcgcgcgcg
     4081 aactgcgc
//
LOCUS       DASUYN010000406         2582 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1889672, whole genome shotgun sequence.
ACCESSION   DASUYN010000406 DASUYN010000000
VERSION     DASUYN010000406.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2582)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2582)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2582
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1889672"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..938
                     /locus_tag="VF061_07895"
     CDS             <1..938
                     /locus_tag="VF061_07895"
                     /inference="COORDINATES: protein motif:HMM:NF028180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669466.1"
                     /translation="LQRLPGALAPLELHNSPLSELATLGFEYGYSAAAPEVLVLWEAQ
                     FGDFINGAQVIVDQFLAAGLSKWGLTTRLTLLLPHGYEGQGPEHSSARLERFLQLAAE
                     GNIRVANPTTPAQYFHLLRRQARRTRQRPLVIMTPKSLLRLPQANSTLEDLAGGAWRP
                     VLDDPAMNGDRKQIRRLVLCSGKVYYDLLTEADKMGHGRPALVRLEQLYSFPWTEMRA
                     VLGRYGKLEELVWVQEEPRNMGAWTYVEPKLRELAPAGVEVLYAGRPERASPAEGYPA
                     AHTAEQGRIIREALGSGRKVPEPLPTVAAAGEAKG"
     gene            complement(993..1310)
                     /locus_tag="VF061_07900"
     CDS             complement(993..1310)
                     /locus_tag="VF061_07900"
                     /inference="COORDINATES: protein motif:HMM:NF013964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease signature motif containing
                     protein"
                     /protein_id="HEX6669467.1"
                     /translation="MQSHRDWLLAQHGPVCAYCGTETASEVITLDHVRPRRGQTAYDR
                     ADNLVLACRDCNAAKADTPLVAFLMQRRSRGVFLLHYGEHLSEPLRELARQASERPIL
                     AKE"
     gene            1530..1964
                     /locus_tag="VF061_07905"
     CDS             1530..1964
                     /locus_tag="VF061_07905"
                     /inference="COORDINATES: protein motif:HMM:NF024966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SgcJ/EcaC family oxidoreductase"
                     /protein_id="HEX6669468.1"
                     /translation="MEASGLDAASRGAVEATVDRYVAASNEGDAEELAELYAEDALLL
                     PPDHEPIQGRDAIGEFWRQGTDTGLEVTTLRLEVHGDVAYMVGRYRLPPTEEEAADSG
                     QYVLCLKRQVDGSWKLTADIWNGSGESDERGADSGSPETAVS"
     gene            complement(1972..>2582)
                     /locus_tag="VF061_07910"
     CDS             complement(1972..>2582)
                     /locus_tag="VF061_07910"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEX6669469.1"
                     /translation="EEAGGRWGRGRGSRGRRWLWIVLILLVIPLLVGAGIAVVAGRPI
                     AFDVIRRMTDRKFPDGRWVTVSELDRWRADPGRAQPVLLDARTPEEYAVSHLQDAVRI
                     DPYKPSLRPLRGFPKDTAIVLYSSVGYRGARVAAFLARQGYTQVHNLEGGQFRWANAG
                     RPVFRHDRPTTEVHPYNPTWGLLLESQYRIEAPPVEKQSAAP"
BASE COUNT          422 a          854 c          957 g          349 t
ORIGIN      
        1 cgctccagag gctgcccggc gcgctggcgc ccctcgagct gcacaacagc ccgctttccg
       61 agctggccac gctcggcttc gagtacgggt acagcgcggc agcgccggag gtgctggtcc
      121 tgtgggaggc gcagttcggc gacttcatca acggcgcgca ggtgatcgtg gaccagttcc
      181 tcgcggccgg actctccaag tgggggctga ccacgcggct caccctgctg ctgccgcacg
      241 ggtacgaggg ccagggaccc gagcactcga gtgcccggct ggagcgcttc ctccagctgg
      301 cggccgaggg gaacatccgg gtcgccaatc cgacgacgcc ggcgcagtac ttccacctgc
      361 tgcgacgcca ggcgcggcgc acccggcagc gcccgctggt catcatgacg ccgaagagcc
      421 tgttgcggct gccccaggcc aactcgacgc tggaggacct cgccggcgga gcctggcggc
      481 cggtcctgga cgaccccgcg atgaacgggg acaggaagca gatccgccgg ctggtgctct
      541 gcagcggcaa ggtctattac gacctgctca ccgaggccga caagatgggc catgggcggc
      601 ccgccctggt gcggctggaa cagctctact ccttcccctg gaccgagatg cgggcggtgc
      661 tcggccggta cgggaagctg gaggagctgg tctgggtgca ggaggagccg cgcaacatgg
      721 gcgcgtggac ctacgtggag cccaagctcc gggagctggc ccccgcgggc gtcgaggtgc
      781 tgtacgcggg acggcccgaa cgggccagtc cggcggaggg ctacccggcg gcccacacgg
      841 cggagcaggg ccggatcatc cgcgaggccc tgggatcggg ccggaaagtg ccggaaccac
      901 tgcctacggt ggcggccgcc ggcgaggcca aggggtgaac gtgctagagg gcggctcgaa
      961 ggccgccctc tctcatctgc tccgtcgccg actcactcct tggcgagtat cggccgttcc
     1021 gacgcctgcc gtgcgagctc ccggaggggc tccgagagat gctccccgta gtgcaggagg
     1081 aacacccccc gagaccggcg ctgcatgaga aacgcgacca gaggcgtgtc ggccttggcc
     1141 gcgttgcagt cccggcaggc aagcaccagg ttgtccgccc ggtcgtacgc ggtttgaccg
     1201 cgacggggac gaacgtgatc cagggtgatc acttcggagg ccgtctcggt gccgcaatag
     1261 gcgcacaccg gcccgtgctg ggccaggagc caatcgcgat gcgactgcat ggagcgaccg
     1321 ggggaacggc ggaacgtggg gacggagact gcggaatgtc tacgtgatct gcgtgccaca
     1381 aatatccagg ttgagaggga acatgggggc cggaagtgcc gacccgtaag gacactggga
     1441 attctagcaa gaacggcgcc aaaatgacag caagcccccg atttcggcct ttcctcggac
     1501 tcctggcggc ccttgccggc gggtgtcgcg tggaagcctc ggggctcgat gccgcctccc
     1561 gcggcgccgt cgaggcgacg gtggaccgct acgtggccgc gagcaacgag ggcgatgccg
     1621 aggagctggc cgagctttac gccgaagacg cgctcctcct ccccccggat cacgagccga
     1681 ttcagggccg ggacgcgatc ggggagttct ggaggcaggg gaccgacacc gggctggaag
     1741 tgaccacgct ccggctggag gtccacggcg acgtggccta tatggttggg cggtatcggc
     1801 ttccgcccac ggaagaggaa gcggccgact ccggacaata cgtgctctgc ctcaagcgcc
     1861 aggtggacgg cagctggaag ctgaccgccg acatctggaa cggcagcggg gagtcggacg
     1921 agcggggggc cgactcgggg tcgccggaga cggcggtcag ctaagcgggg actacggtgc
     1981 cgccgactgc ttctcgaccg gcggagcctc gatccggtat tgcgactcca gcagcagccc
     2041 ccaggtcgga ttgtaggggt ggacctcggt ggtggggcgg tcgtggcgga agacgggacg
     2101 cccggcgttg gcccaccgga actggccgcc ttccaggttg tgcacctggg tgtagccctg
     2161 ccgcgcgagg aaggcggcca cccgtgcgcc ccggtagccc accgacgagt agagcacgat
     2221 cgccgtgtcc ttgggaaacc cgcgcagcgg acgaaggctc ggcttgtagg gatcgatccg
     2281 gaccgcgtcc tggaggtggg agacggcata ctcctccggg gtccgggcat cgagcagcac
     2341 gggctgggcg cgaccggggt ccgcgcgcca gcgatccagc tcgctcaccg tcacccatcg
     2401 gccatcggga aacttgcggt cggtcatccg gcggatgacg tcgaaggcga tcggccggcc
     2461 ggcgacgacg gcgatgccgg cgccgaccag caggggaatg acgagcagga tgagcacgat
     2521 ccagagccac cggcgcccgc gcgagccccg cccgcggccc cagcggccgc cggcctcttc
     2581 ct
//
LOCUS       DASUYN010000407         3226 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1668379, whole genome shotgun sequence.
ACCESSION   DASUYN010000407 DASUYN010000000
VERSION     DASUYN010000407.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3226)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3226)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3226
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1668379"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1037
                     /locus_tag="VF061_07915"
     CDS             <1..1037
                     /locus_tag="VF061_07915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669470.1"
                     /translation="VGGAVTTAPLWQARFTRNGRTLGFGASINASDEEFRARSGFFPR
                     PGLVHLNFRPRVTVYGDVGSLMESATFDINLNGRWRYQEFVGGDGILDEQLHFNVNTT
                     LKGGWNLTGSLLLETFGYPFEIYRGYRIELPRPGGGADTVAFTGRPRIPNRDYVLSFE
                     TPEFKHLSGNAFILWGNDENFFEWSPGRIIIHNFGLTWRPTGKLRLDGTYALQQVRRV
                     SDGSLVNVAHLPRVKLEYQLSRPIFLRLVGEYGHEKQDSLRDDTRTEAPILVFDPGTG
                     EFARTRAFSRSSFRGDILFSYQPNPGTVAFFGYGSTLLDPLDPASPRASGLRRSEDGF
                     FLKLSYLFHM"
     gene            complement(981..1397)
                     /locus_tag="VF061_07920"
     CDS             complement(981..1397)
                     /locus_tag="VF061_07920"
                     /inference="COORDINATES: protein motif:HMM:NF042735.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX6669471.1"
                     /translation="MPARERVLELVRYVEGGRIPEAIAEFYDDDVLMQENRQPPTVGK
                     AANLIRELAFGDSVERWHEVRARAVAVDGDQALIEWVFDYTTREGRRIRMEEIAQQTW
                     RDGKIERERFFYDTATLGSHVEQVAELQEEPVLRPA"
     gene            1757..2971
                     /locus_tag="VF061_07925"
     CDS             1757..2971
                     /locus_tag="VF061_07925"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEX6669472.1"
                     /translation="MRVLLLNYEFPPLGGGAGVATQALARGLAARGVTVDVVTAGERD
                     ECRSEVLWDGHGEEGLLTVYRVKCSRTGVHEAGMAGAFSYLHHALPLVRARMRDEHYD
                     IVHLFFSLPTGAMLPFLNLGDTPVIVSLRGSDVPGYDPHQKTLERCHRMLLPVTRWIW
                     RRAARVVAVCESLGRLALRTDPGLQYSVIPNGVDLTRFRPSTRVHGRHGGKIRCIAVA
                     RLVERKGLGDLIEALAALERGRFELEILGSGPDEQRLKDLACRLGVSREVIFAGSVSR
                     SEIPGRYRDADIFTLASWEEAFGNVFAEAMASGLPIVGSAVGGIPELVEHGKNGFLVP
                     PREPRALAAAIRLLADNPDLRAEIGRRNRAQAEANLSWARVTTRYLSTYNGVLRRVPA
                     RPALAELPSSTW"
     gene            2971..>3226
                     /locus_tag="VF061_07930"
     CDS             2971..>3226
                     /locus_tag="VF061_07930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669473.1"
                     /translation="MDRVGFWIARDAWPVLRAARLPPERLEALARRRLIRMLRTAATV
                     PFYRRRLDAAGVGDDALMMEQCPEQVLEALAPVTKVELREA"
BASE COUNT          442 a         1209 c         1082 g          493 t
ORIGIN      
        1 gggtgggcgg cgcggtgacc accgcgccgc tctggcaggc ccgcttcacc cgcaacggcc
       61 gcacgctggg cttcggtgcc agcatcaacg ccagcgacga ggagtttcgc gcccgaagcg
      121 ggttcttccc ccggcccggg ctggtgcatc tcaacttccg cccccgcgtg acggtgtacg
      181 gcgacgtcgg ctcgctgatg gagagcgcca ccttcgacat caacctgaac ggccgctggc
      241 gctaccagga gttcgtcgga ggcgacggca tcctcgacga gcagctccac ttcaacgtca
      301 acaccaccct gaagggcggc tggaacctga ccggctcgct cctgctggag acgttcggct
      361 atccgttcga gatctaccgg ggctatcgga tcgagctgcc ccggcccggc ggaggcgccg
      421 acacggtggc cttcaccggc cggccccgga tccccaaccg cgattacgtg ctctccttcg
      481 agaccccgga gttcaagcac ctctcgggga acgcgttcat cctgtggggc aacgacgaga
      541 acttcttcga gtggtcgccc ggccgcatca tcatccacaa cttcggcctc acctggcggc
      601 ccacgggcaa gctccggctc gacggcacct acgcgcttca gcaggtccgc cgggtgagcg
      661 acggcagcct ggtaaacgtc gcccaccttc cccgggtcaa gctggagtac cagctctcgc
      721 gtccgatctt cctgcggctg gtcggcgagt acggacacga gaagcaggat tcgctccggg
      781 acgacacccg gaccgaggcg ccgatcctcg tcttcgaccc cggaaccggc gagttcgcgc
      841 gcacccgggc cttcagccgc agctcgttcc ggggcgacat cctcttctcc taccagccca
      901 atccgggcac cgtggccttc ttcggctacg gcagcacgct cctggacccg ctcgaccccg
      961 cctcgccccg cgcgagcggg ctacgccggt cggaggacgg gttcttcctg aagctcagct
     1021 acctgttcca catgtgatcc gagggtggcc gtgtcgtaga agaaccgctc gcgctcgatc
     1081 ttcccgtcgc gccaggtctg ctgcgcgatc tcctccatcc tgatgcgccg gccctccctg
     1141 gtggtgtagt cgaacaccca ctcgatcagc gcctggtccc catccaccgc gaccgcgcgg
     1201 gcgcgcacct cgtgccaccg ctcgaccgag tcgccgaagg ccagctcccg gatcaggttg
     1261 gccgccttcc ccacggtcgg cggctgccgg ttctcctgca tgaggacgtc gtcgtcgtag
     1321 aactccgcga tcgcctccgg aatcctgccc ccctccacgt accgcaccag ctcgagcacc
     1381 cgttcccgcg caggcatcga acacctcccg aaaagtggtc acgccgacag atagttgcat
     1441 agtcaactat cctcggcccc ggaaggttcc cgcgcccgcg cggccggttg cagtccggat
     1501 gacggtcgcg agcggatcgt gtgggcggac cgcaacagcg atcccgacgc cacccaacgc
     1561 gcaagccgct gcacgtcccc cgcgccggta cgcaaccgca tcgcgtgcgc gggcttgtcc
     1621 tctgctgccg cgcacccgcg accggtgcgg cggagggctc accactggct tgcctcttgc
     1681 ccgtccacct cgcaagtcgg cgtccgccaa gaagctgaac accatctcat tttcgaacgg
     1741 ggctgccgcg ggaccgatgc gcgttctcct gctgaactac gagttccccc cgctgggcgg
     1801 cggcgcgggc gtcgccaccc aggcgctggc ccgcgggctg gcggcgcgcg gcgtgacggt
     1861 ggacgtggtc accgccggcg agcgcgacga gtgccgttcc gaggtgctct gggacgggca
     1921 cggcgaggag gggctgctca cggtctaccg cgtcaagtgc agccggaccg gtgtgcacga
     1981 ggccgggatg gcgggggcgt tcagctatct ccaccacgcg ctgccgctgg tgcgggcccg
     2041 catgcgcgac gagcactacg acatcgtcca cctgttcttc tcgctgccca ccggcgcgat
     2101 gctgcccttc ctgaacctgg gggacacgcc ggtgatcgtc tcccttcgcg gctccgacgt
     2161 tcccggctac gacccccacc agaagaccct cgagcgctgc caccgcatgc tgctgcccgt
     2221 gacgcgctgg atctggcggc gggccgcccg ggtggtggcc gtgtgcgaga gcctggggcg
     2281 gctcgccctg cggaccgatc ccgggctcca gtattcggtg atcccgaacg gcgtggacct
     2341 gacccggttc cgcccctcca cccgggtcca cggccgccac ggcgggaaga tccgctgcat
     2401 cgcggtcgcg cggctggtgg agcgcaaagg cctcggggac ttgatcgagg ccctcgccgc
     2461 gctggagcgc gggcgcttcg agctggagat cctcggctcg gggcccgacg agcaacggct
     2521 caaggacctc gcctgccggc tcggcgtgag ccgggaggtg atcttcgcgg gctcggtgag
     2581 ccggagcgag atccctgggc gctaccgcga tgccgacatc ttcacgctcg cctcctggga
     2641 ggaggccttc ggcaacgtgt tcgccgaggc gatggcgtcg gggctcccga tcgtgggcag
     2701 cgccgtgggc gggatccccg agctggtcga gcacggcaag aacggcttcc tggtgccgcc
     2761 gcgcgagccc cgggcgctgg ccgccgcgat ccggctcctc gccgacaacc ccgacctccg
     2821 cgccgagatc gggcggcgga accgggcgca ggccgaggcg aacctgtcct gggcccgcgt
     2881 gaccacccgc tacctctcga cctacaacgg ggtgctgcgc cgcgtccccg cgcgcccggc
     2941 gctggccgag ctgccctcga gcacctggtg atggatcgcg tcgggttctg gatcgcccgg
     3001 gacgcctggc ccgtgctgcg ggccgcgcgg ctccccccgg agcggctcga ggcgctcgcg
     3061 cgccggcggc tcatccggat gctccgcacc gcggcgacgg tgccgttcta ccggcgccgc
     3121 ctcgacgcgg ccggggtggg cgacgacgcg ctgatgatgg agcagtgccc cgagcaggtg
     3181 ctggaggcgc tggcccccgt caccaaggtg gagctgcgcg aggcgg
//
LOCUS       DASUYN010000408         4231 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_784691, whole genome shotgun sequence.
ACCESSION   DASUYN010000408 DASUYN010000000
VERSION     DASUYN010000408.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4231)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4231)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4231
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_784691"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..426
                     /locus_tag="VF061_07935"
     CDS             <1..426
                     /locus_tag="VF061_07935"
                     /inference="COORDINATES: protein motif:HMM:NF019375.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEX6669474.1"
                     /translation="EGSKEADVVLVEGQGSINHPGYSGVTLGLLHGSCPDALILCHQT
                     SRQYIGDYREAAWLRIPPLSEYVRLYESIAAAVHPTRVIGISLNTYDLSDVEARRACD
                     QAQRETGLPATDPVRFDPAPLLGAIAEERERYLRRRKAQ"
     gene            506..982
                     /locus_tag="VF061_07940"
     CDS             506..982
                     /locus_tag="VF061_07940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669475.1"
                     /translation="MFPGSPSRLLPTWPLHALLPLASTGLVLGVWLRGCTRPLPVRCR
                     GPDGARQLLASEDLGYLLRRCARIALRDGEVVRPVSARVLLGCRVLEIVLASPYLPPP
                     VQLRQLFPRARVREGVIALPLGLGSPEEALALCAAERLPVAATRIAYRTSADALQR"
     gene            1015..1974
                     /locus_tag="VF061_07945"
     CDS             1015..1974
                     /locus_tag="VF061_07945"
                     /inference="COORDINATES: protein motif:HMM:NF044972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HEX6669476.1"
                     /translation="MIRPIPPTLELALQQGIADTLGRLAQILEINGETIVRGGARVVG
                     IWLLAWLAYRVVRLAAGRIEAAVDDGDDSVTTLRERRGKTISQLLRSVGRIVIFAIAL
                     LLTFNIFIDIGPILAGAGILGLAISFGAQSLVKDVISGFFILFENQFAIGDVVEAGGK
                     SGVVEKMTLRVVVLRDLRGVMHVIPNSEIKVVSNMTRGWSRAVVDVGVGYAEDVDRAL
                     TVVRDEAARFSTDPEWAAQLDGPVEVPGIEALGDSAVVIRSLIKTQPGSQWNAAREYR
                     RRLKLRFDQENIEIPFPQRRVHVHVDEGTPADSRLRAAGAAGG"
     gene            1971..3491
                     /gene="cysS"
                     /locus_tag="VF061_07950"
     CDS             1971..3491
                     /gene="cysS"
                     /locus_tag="VF061_07950"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: protein motif:HMM:TIGR00435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HEX6669477.1"
                     /translation="MSLQLHNTLTRRIEPFVPLVPGRATLYTCGPTIYNYAHIGNFRT
                     FLFEDLLRRWLEASGYEVFHIMNLTDVDDRTIAAALQKGVTLRQHVDPFARAFEEDRD
                     WLRIRPAHAQPRATEYIGAMIELISGLLEKEVAYRGEDGSVYFAIARFPAYGRLSQLD
                     RRELRAGASERVSADEYAKEDARDFVLWKAAKPEDETVGAAWDAPFGRGRPGWHIECS
                     AMALELIRRKWGVDVLDIHAGAVDLIFPHHEDEIAQSCAYTGREEFARFWLHGEFLDV
                     GGTKMSKRYGNILTVRDLREQGADAGAVRHLLFNTHYRQKLDWRDEALAAAREGSARL
                     GAFRDRLELAAQEEDTPDAAAAAERFRDGFTAALDNDLNAPEALGALHVLVREGNRLL
                     DEGRRLGPAFRAAWALADEVLAVAPTARARTVAANALAVAEEDGIPVRPPEVPPPDAA
                     DSEAWALRWAAVRAAEKRGRNFGEADRIRDVLREAGWEIRDRRDGAIEVVRRIPPH"
     gene            3547..3619
                     /locus_tag="VF061_07955"
     tRNA            3547..3619
                     /locus_tag="VF061_07955"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3580..3582,aa:Thr,seq:tgt)
     gene            3720..3804
                     /locus_tag="VF061_07960"
     tRNA            3720..3804
                     /locus_tag="VF061_07960"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3754..3756,aa:Tyr,seq:gta)
     gene            3825..3897
                     /locus_tag="VF061_07965"
     tRNA            3825..3897
                     /locus_tag="VF061_07965"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3858..3860,aa:Gly,seq:tcc)
     gene            3952..4024
                     /locus_tag="VF061_07970"
     tRNA            3952..4024
                     /locus_tag="VF061_07970"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3985..3987,aa:Thr,seq:ggt)
     gene            4110..>4231
                     /locus_tag="VF061_07975"
     CDS             4110..>4231
                     /locus_tag="VF061_07975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003640798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEX6669478.1"
                     /translation="MAKAKFERTKPHVNVGTIGHVDHGKTTLTAAITAIQAKKG"
BASE COUNT          637 a         1451 c         1493 g          650 t
ORIGIN      
        1 gaggggagca aggaggcgga cgtcgtgctg gtggaggggc agggaagcat caaccacccc
       61 ggctattccg gtgtcacgct cggtctgctg cacggttcct gccccgacgc gctgatcctc
      121 tgccaccaga ccagccggca gtacatcggg gactaccgcg aggccgcctg gctccggatc
      181 ccgccgctca gcgagtacgt gcggctctac gagtccatcg cggccgccgt ccatcccacg
      241 agagtcatcg ggatctcgct caacacctac gacctcagcg acgtggaagc ccgccgggcc
      301 tgcgaccagg cgcaacggga gaccggccta ccggcgacgg atccggtccg gttcgatccg
      361 gccccattgc tgggggcgat cgcggaggaa cgggagcgat atctccggag gcggaaggcg
      421 cagtagccca ccggggtgcg gcaccgggct cctagcggcg tcggaatgat gcgggcaggt
      481 gtctgcgccg cccccatgat gggccatgtt ccccggctcc ccctcccgcc tccttcccac
      541 gtggcccctc cacgctctcc tgccgttggc ctccaccggt ctcgtgctcg gcgtgtggct
      601 ccgcggctgc acccggccgc taccggtccg ctgccggggt cccgacggtg cgcggcagct
      661 cctcgcctcg gaagacctgg ggtacctcct gcgccggtgc gcccggatcg cactgcgcga
      721 tggcgaagtc gtgcggccgg tgtccgcccg ggtgctgctc ggctgtcgag tgctcgagat
      781 cgtcctcgcc tcgccctacc tcccgccgcc cgtccagctt cgccagctct tccccagggc
      841 gcgggtgcgt gagggcgtga tagcgctgcc gttggggttg ggctccccgg aagaggcgct
      901 ggccctctgc gccgccgaac ggctgccggt cgcggccacg cgcatcgcgt atcgcaccag
      961 cgccgacgcg ctccagcgtt gacgcgctcc cggcggggcc tctaggttag ggccgtgatc
     1021 cggcccattc cgcccacgct cgagctcgcg ctgcagcaag gcatcgccga caccctcggc
     1081 aggctcgccc agatcctcga gatcaacggc gagacgatcg tgcgcggcgg ggcgcgcgtg
     1141 gtcggcatct ggttgctggc gtggctggcc taccgggtcg tccggctggc ggcaggccgg
     1201 atcgaagccg cggtggacga cggcgacgat tccgtcacca ccctgcggga gcgccggggc
     1261 aagaccatct cccagctgct ccggagcgtg ggccggatag tcattttcgc catcgcgctc
     1321 ctcctcacct tcaacatctt catcgacatc gggccgatcc tcgcgggtgc cggcattctc
     1381 ggcctcgcca tctccttcgg cgcccagagc ctggtgaagg acgtcatctc cggcttcttc
     1441 attctgttcg agaaccagtt cgcgatcggg gacgtggtcg aagccggtgg gaagagcggt
     1501 gtggtcgaaa agatgaccct gcgggtggtc gtgctccggg atctccgggg cgtcatgcac
     1561 gtcattccca acagcgagat caaggtggtc agcaacatga cccggggctg gtctcgcgcc
     1621 gtcgtggacg tcggcgtggg ctacgcggag gacgtggacc gagcgctcac cgtcgtccgc
     1681 gacgaggccg cccggttctc caccgacccg gagtgggccg cgcagctcga cgggccggtc
     1741 gaggttcccg ggatcgaggc cctgggcgac agcgccgtgg tcatccgctc gctcatcaag
     1801 acccaacccg gctcgcagtg gaacgccgcc cgcgagtacc gtcggcggct caagctccgg
     1861 ttcgatcagg agaacatcga gatccccttc ccgcagcgga gggtgcacgt ccacgtggac
     1921 gagggcaccc ccgcggacag ccgcctgagg gccgccgggg cggccggcgg atgagtctgc
     1981 agctccacaa cacgctcacc cgccggatcg agccgttcgt gccgctggtg ccgggccggg
     2041 cgaccctcta cacctgcggt cccacgatct acaactacgc ccacatcggg aacttccgga
     2101 ccttcctgtt cgaggacctc ctgcggcgct ggctggaggc gagcgggtac gaggtcttcc
     2161 acatcatgaa cctcaccgac gtggacgacc ggaccatcgc cgcggcgctc cagaagggcg
     2221 tcaccctccg gcagcacgtg gaccccttcg cccgggcctt cgaggaggat cgggactggc
     2281 tccgcatccg cccggcgcac gcccagccga gggccaccga gtacatcggg gccatgatcg
     2341 agctgatctc gggactgctg gagaaggaag tggcctaccg gggcgaggac gggtcggtct
     2401 acttcgccat cgcccgcttt cccgcgtacg gtcgcctctc gcagctcgat cggcgcgagc
     2461 tgcgcgccgg ggccagcgag cgggtcagcg ccgacgagta cgccaaggag gacgcccggg
     2521 acttcgtgct ctggaaggcg gcgaagcccg aggacgagac cgtcggcgcg gcctgggacg
     2581 ccccgttcgg ccggggtcgc ccgggctggc acatcgagtg ctcggcgatg gccctggagc
     2641 tcattcggcg gaagtggggg gtggacgtcc tcgacatcca cgccggcgcg gtggacctga
     2701 tcttccccca ccacgaggac gagatcgccc agagctgcgc ctacaccggg cgggaggagt
     2761 tcgcccggtt ctggctgcac ggggagttcc tcgacgtggg cggcaccaag atgtccaagc
     2821 gctacgggaa catcctgacc gtgcgtgacc tgcgggaaca gggcgcggac gccggcgccg
     2881 tccggcacct gctcttcaac acccactacc ggcagaagct cgactggcgc gacgaggcgc
     2941 tggccgccgc cagggaaggt tcggcccggc tgggggcctt ccgcgaccgg ctggagttgg
     3001 cggcccagga ggaggacacc cccgatgccg ccgccgccgc cgaaaggttc cgggacgggt
     3061 tcaccgcggc gctggacaac gacctgaacg ccccggaggc gttgggcgcg ctccacgtcc
     3121 tggtccggga aggcaatcgt ctgctggacg agggccggcg gctgggaccc gccttccggg
     3181 cggcgtgggc gctggccgac gaggtcctcg ccgtggcccc gaccgcgcgg gcccggaccg
     3241 tggccgccaa cgccttggcg gtggcggagg aagacgggat tccggtccgt ccgcccgaag
     3301 tccccccgcc cgatgccgcc gacagcgagg cgtgggccct ccgctgggcg gcggtccggg
     3361 cggcggagaa gcgaggccgg aacttcggcg aggccgatcg aatccgcgac gtgctccggg
     3421 aggccgggtg ggagatccgg gaccgccggg acggcgcgat cgaggtggtc cgacgtatcc
     3481 caccccattg actagcccca acttgccctc tatcatacga gtctgtcttg gttcggcctc
     3541 tttttggctg acgtagctca actggcagag cacctgtttt gtaaacaggc ggttaggggt
     3601 tcgattcccc tcgtcagctc ggctcatgcc gaaggtcagt gccgacactc tcatctcgcg
     3661 tgggaccccg cttcgtcgcc ggcggggttc tgtctcagat gagggtgcgt gcaaggctgg
     3721 gtggggtgac cgagtggcta atggtagcag actgtaaatc tgccgggcta acgccctacg
     3781 taggttcgaa tcctaccccc accatggacg cgggcgcggc aatcgcgggt gtagctcagt
     3841 tggtagagca tcagccttcc aagctgaggg tcgcgggttc gagtcccgtc gcccgcttcg
     3901 acgcggagac gcagagcagt cggatggagg caggtcgaca ggcgtgatgt cgctcgcgta
     3961 gctcagtcgg tagagcgcat ccttggtaag gatgaggtca ccggttcaat cccggtcgcg
     4021 agctcttgta aggcgggtag cggggcgggg gcgggcggta ccgccgtacc gcctacacag
     4081 ggaactccaa cggacaccgg aagaccgaca tggcgaaggc caaattcgag cggacgaagc
     4141 cgcatgtgaa cgtggggacg atcgggcacg tggaccacgg gaagaccacg ctgacggcgg
     4201 cgatcacggc gatccaggcg aagaagggga t
//
LOCUS       DASUYN010000409         2984 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_347518, whole genome shotgun sequence.
ACCESSION   DASUYN010000409 DASUYN010000000
VERSION     DASUYN010000409.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2984)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2984)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2984
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_347518"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..506)
                     /locus_tag="VF061_07980"
     CDS             complement(<1..506)
                     /locus_tag="VF061_07980"
                     /inference="COORDINATES: protein motif:HMM:NF012632.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669479.1"
                     /translation="MPRLEARVVLVSALVVAGLACREDAEPPTAAHLDPPLVLTADQP
                     LAFRQVSVGADHSCGVTTANAAYCWGGNGSGELGIGSTTGPESCLGSPCSTRPVRVRG
                     GLAFRQVSATGRFHTCGVTTANLAYCWGRNVFGELGDGSGIDSPRPVRVAGGLAFRQV
                     SAGSLHTCG"
     regulatory      658..771
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01051"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cyclic di-GMP riboswitch class I; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="cyclic di-GMP"
                     /db_xref="RFAM:RF01051"
     gene            complement(1204..1878)
                     /locus_tag="VF061_07985"
     CDS             complement(1204..1878)
                     /locus_tag="VF061_07985"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HEX6669480.1"
                     /translation="MPRPVATKGPAAAAKAPAPAARAVKPVVGVDSTALEFAITARHA
                     HRPLARALASRTRNAAVAERAAWALTREAARLKLSPSLLAAVLLVENRPLDSSAVSSQ
                     GAIGLMQVMPIHAGSYGCGSADLRMVDANICHGARILHTYIRRTGSVPLALRRYNGCV
                     RGRNTPGCSRYPQRVLRIAGRLRREVLRSSGPPSAGAPQLSLAGSGRDAATTSARSAT
                     RGYPTR"
     gene            2383..2973
                     /locus_tag="VF061_07990"
     CDS             2383..2973
                     /locus_tag="VF061_07990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669481.1"
                     /translation="MPNPLSPDPTLRPTSGPSPRRRPARPAAWIRARQTRVAGLLLLA
                     ALAGAGCSDQTAPTSPDTVDAPVSGGAADAKRTTFISYLLTNPTVFANSTYGADVSVK
                     YELTNPGGKTSGLHIHGELRQGSVTQSSDYTKIECGEVPGTIGHGACGASTLMHIPPG
                     SFQHGPAQFTLRLSNLKDNGATTVASRTVDVYIVLF"
BASE COUNT          484 a         1048 c         1024 g          428 t
ORIGIN      
        1 ccgcaggtgt ggaggctgcc ggcgctcacc tggcggaagg cgagcccgcc ggccacccgg
       61 accggccggg ggctgtcgat cccgctgccg tcccccagct caccaaagac attgcggccc
      121 cagcagtagg cgaggttggc cgtggtgacg ccgcaggtgt ggaagcggcc cgtcgcactc
      181 acctgccgga acgcgagtcc gccccgcacc cggaccggcc tcgtgctgca gggagagccc
      241 aggcacgact ccggcccggt cgtgctgccg atgcccagct cgccggagcc attcccaccc
      301 cagcaatagg ccgcgttggc ggtcgtcacg ccgcagctat ggtccgcgcc aacgctcacc
      361 tggcgaaagg cgagcggctg gtccgccgtg agcacgagcg gcgggtccaa gtgcgccgcc
      421 gtgggcggct cggcgtcctc gcggcaggcg aggccggcca cgaccagagc cgagacgagc
      481 acgacgcggg cttcgagacg tggcatggcg ggcctcctga aatcctgctg ccccaagatg
      541 ggagcagctg aatcaagccg ctgtcaagcc gggccgaacg gcgccgcgga gcatatctgt
      601 ctcgcgtgcg tcggctgatt gacagccctg gtacgccgcc ctaccgtagc gcccacacct
      661 cgataaaggc acagccggcg aagccggcgc cgcaaagcca cgggtcctcg cctcctccgc
      721 gacgccctcc atcgacgcca cgaagggccc cacgaccgcc gagctgccga aagcgttgct
      781 ctgcagagtc aaccgtggaa cgaggaggcg tgtatggtat ccagccgaca acgcagcgct
      841 gctggtctcg taatcagtgc tgccgcgcta ctagcgtgtg ccgaccagcc gaccgcacca
      901 gtgccccact cctccgcgcc cccgctcaaa gccgcgcctt tctccgccga attgctgagc
      961 ccgcagtggc aagagcaggc acgcgcgctg gtccgcgcga acgccgtcag tcccatcgcg
     1021 gcgggtcgca tgttcgccgc cctcagtgtg gcgcaataca gagcgatcgt cgcggtcgat
     1081 gagcatctga gcacggaggg aacgcttgcg gctcaaggct tcggtgaggg gggccgccgc
     1141 cggtatgagg cgcaccgagg gtcacgagga gagactgcag tgtttgtgcg acctcgccgc
     1201 ggatcatctt gtcgggtagc cgcgcgtagc actccgtgcg gaggtcgttg ctgcgtcacg
     1261 tccactgccg gcgagtgaga gctgaggggc gccggcagac ggtgggcccg aggagcgcag
     1321 cacttcacgt cgcagccgcc cggcgatccg gagtacccgc tgcggatagc gcgagcagcc
     1381 cggcgtgttc cggccccgga cgcagccgtt gtagcggcgg agcgccaagg ggacagaccc
     1441 cgtccgccgg atataggtat ggaggatccg ggctccgtgg cagatgttgg catcgaccat
     1501 ccggagatcc gcggacccgc agccgtagct gccggcgtgg atcggcatca cctgcatcag
     1561 gccgatcgct ccctggctgc tcaccgcgct cgagtccagc ggccggttct cgaccaggag
     1621 cacggccgcg agcaggctcg ggctcagctt gagccgcgcg gcttcccggg tcagggccca
     1681 ggcagcgcgc tcggccaccg cggcgttccg ggtgcgcgag gcgagcgcgc gcgcgagcgg
     1741 ccggtgagcg tggcgcgcgg tgatggcgaa ctcgagcgcc gtgctgtcca cccctacgac
     1801 aggcttcaca gccctggccg cgggcgcagg tgccttggcc gcggcggcgg gccccttggt
     1861 ggcgactggc cgcggcactg ctgcaggctc ccagcgcgcg cccggggcac acgccagaac
     1921 ccccagcaac gcagcagacc accggctgag cctccggcac ccgacgaaag agtgcaacat
     1981 ttggtctccc ggacaggacg ccccaggatc gcactcgcag cgaggccggc tcaagtgtgc
     2041 cgtgtcttgg cgcgcggaag aacgcgacat ctgtcccgcg cgcattgtgc agtgcgattg
     2101 ctcgaagctg aagtgaggag cggagtagca ctcccgaagg ttgcgagtgc agccgctggc
     2161 ggtggtcggg cgcttgggcg gattgttaca gagctcggag ccggaagcgt gcacccccag
     2221 cggtgcttct tgggctgcac cctcgaggaa gaagtggatg ttggtcggcg tctcctggcg
     2281 atcgagcacc agggccggcc cggatggcgg ctgaggtcgg caccctccgc agatcatggg
     2341 tgtggcagtt cacccatgac ctcgaacccg taggagccag tgatgccgaa ccctctctcg
     2401 cccgacccga cgctccgtcc cacgtccggt ccctcgcccc gccgccgtcc ggcgcggccg
     2461 gcggcctgga tccgcgcccg tcagacccgc gtggctggtc tgctccttct cgcggccctg
     2521 gccggagcgg ggtgcagtga ccagacggcg ccgacctcac ctgacacagt tgatgccccc
     2581 gtcagcggcg gcgccgcaga cgcgaagcgg accacgttca tctcgtacct gctcaccaac
     2641 cccacggtgt tcgcgaattc cacctacggc gcagacgtct cggtcaagta tgagctgacg
     2701 aacccaggcg ggaagaccag cgggctccac atccacggtg agctgcggca agggtccgtc
     2761 acccagagct ccgattacac caagatcgaa tgtggggagg ttcccggtac gatcgggcac
     2821 ggtgcctgcg gggcgtccac cttgatgcac ataccgcccg gcagcttcca gcatggccca
     2881 gcacagttca cgctgagact gagcaatctg aaggacaatg gcgcaaccac cgtcgccagt
     2941 cggacggtcg atgtgtacat cgtcctattc tgatggcagc gctg
//
LOCUS       DASUYN010000410         6731 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_566362, whole genome shotgun sequence.
ACCESSION   DASUYN010000410 DASUYN010000000
VERSION     DASUYN010000410.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6731)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6731)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6731
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_566362"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1103)
                     /gene="trmFO"
                     /locus_tag="VF061_07995"
     CDS             complement(<1..1103)
                     /gene="trmFO"
                     /locus_tag="VF061_07995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate--tRNA-(uracil(54)-
                     C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO"
                     /protein_id="HEX6669482.1"
                     /translation="MSASVVGGGLAGSEAAWALAERGVRVTLHEMRPVVPTPAHRTDR
                     LAELVCSNTFKSVDLTNAHGLLKAELRALGSLLLPCADEARVPGGTALAVDRDVFSRA
                     VHERVTAHPNITVVRGEVTELPSPAVVATGPLTSERLAQAIAARLGASSLAFYDAIAP
                     VVADDSLDHGPLYALSRYGKGGGDDYLNIPLDREGYERFLDRLIAADQYQAHDFDQVP
                     YFEGCLPVEEMARRGRETLRFGPMKPVGLPDPRTGREPYAVVQLRREDRAGQMWNLVG
                     FQTRLRIAEQQRVFRTLPGLGEAEFLRYGSIHRNAYLNSPATLGPALTARDDDRLFFA
                     GQLTGVEGYTESLGTGLLAGINLARRLCGLPATV"
     gene            complement(1100..3511)
                     /gene="topA"
                     /locus_tag="VF061_08000"
     CDS             complement(1100..3511)
                     /gene="topA"
                     /locus_tag="VF061_08000"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR01051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003917 - DNA topoisomerase type I (single
                     strand cut, ATP-independent) activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HEX6669483.1"
                     /translation="MATRPKRAAKKPAPNRSEGATPKPAAPSGGKAKPRAKASKAGRD
                     GAAGGGGRGALVIVESPTKAKTIGKYLGSGYEVKATVGHLRDLPTRELGVDVERGFEP
                     KYVTIKGKTKTLSELKKAAKGASTIYLATDPDREGEAIAWHVADQLDSKAPVHRVLFE
                     EITRDAVLAAMREPRQIDERKVDAQQARRILDRLVGYKASPILWRTIKTGLSAGRVQT
                     VALRLIVEREREIRAFKPQEYWTIEALCEGKGQTFEASLVKVDGHKPQLHSETDARAV
                     VDAVRSLPFVVTKVEQRRRNKRPAAPFTTSTLQQEAAKKLGFSSRRTMRAAQDLYEGI
                     DVGEEGPVGLVTYMRTDSVRVADTAVAAARDLIGERYGKAYLPAQPNAYSDRKNARVQ
                     GAHEAIRPTDVRRHPDQIQRYLQPDQFRLYQLIWQRFVASQMNPAVYDMTVVEFDLGR
                     YLFRATGSVMVFDGYHVLYTEGREKEEGRQVEDLPPIPPLAQGDRVDVKEITPSQHFT
                     EPPPRYSEASLVKELERLGIGRPSTYSAIISTLSAREYVRVEQRRFFPTELGELVEKI
                     MVAKFPEIFNVEFTSGMENELDRIEDGELGWQHVLAEFYGPFTKALEAVDMNALVADA
                     HGLNPEDLAKERCPKCGSPIELKTGRFGPYLACTKYKDTCDYVKSLRKQRAPDRPTDE
                     KCHLCGSPMVIKTGRFGEFLACTTYPACKGTRAIPIGVKCPKCLEGDLAERRTKRGKS
                     FWGCVRYPACDFSTWNRPVVETCPECGWVGMEKKVSKAEGETRTCLRCKHKLVLAEPE
                     EVALA"
     gene            complement(3672..4196)
                     /locus_tag="VF061_08005"
     CDS             complement(3672..4196)
                     /locus_tag="VF061_08005"
                     /inference="COORDINATES: protein motif:HMM:NF013375.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HEX6669484.1"
                     /translation="MPHHLVLVGLPGAGKSAVGRRVAESLGAPLFDIDQLLVREMGMP
                     VVQIFGMVGEPRFREMEHKAVQAAVAAEQPAVIVPGGGWAAQPGHMHWARESSCLRIY
                     LSCGAATAAKRLDQGETRPLLAGADPVERLRKLLEAREPFYRLADFEVATERGTEEQV
                     VEGVLAVARKHGGW"
     gene            complement(4196..5443)
                     /gene="aroC"
                     /locus_tag="VF061_08010"
     CDS             complement(4196..5443)
                     /gene="aroC"
                     /locus_tag="VF061_08010"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004107 - chorismate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HEX6669485.1"
                     /translation="MHLRFTTAGESHGKAFVAVVEGLPAGLPVAAEAVDRDLARRMQG
                     YGRGARMKIERDRIEWLAGVRAGETLGSPVAMLIANRDWANWEDVMAHESAEPGELRR
                     RRVSRPRPGHADLAGVLKYDRLDARDILERASARETAARVAAGALARRLLDEFGVEVG
                     SHVVSLGGVQVPRPAELPVPLNETADRSEVRVLDRSVEPEIVRRIDEAKKAGDTLGGE
                     VEVVARGVVVGLGSHVSWDRKLDGRLAGLLMSIPAVKAVEIGLGVEAARRPGSQVHDA
                     IHAAEERNDGVRGPPHAGDRRGGFRRRSNNAGGLEGGITTGEPVVLRVAMKPISTLMA
                     PLPTVDLSSGEPANAQSERSDVTAVPALGVIAEAMVAIALADAMLEKFGGDSLSEMRR
                     NHQAYLASLGARWSGSRSEAGAG"
     gene            complement(5568..>6731)
                     /locus_tag="VF061_08015"
     CDS             complement(5568..>6731)
                     /locus_tag="VF061_08015"
                     /inference="COORDINATES: protein motif:HMM:NF012485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="secretin N-terminal domain-containing protein"
                     /protein_id="HEX6669486.1"
                     /translation="IIGKDVKGEVTAEVKNQPWPLAFQAVLASQGLSAQEMSGGIIRV
                     DAPGVLSALDSLEPLETSVVRINYAHAGSLEKTVESILTKGRGRVVADTGSNSLIITD
                     TRSRVQNVTEFVRGLDVRTPQLSIQAKIIFVDRTDIEQLGVKYDLGDRSQFFNRLVQR
                     RDPSTGETFDRNVQVINLGGNSVSAIGNAEASITGSALDLIYSTAIGGFSLTTFLSAL
                     ERTELADIQAEPVISTLDNREADILVGEETPVRVIDASSGGQGGTARANVQFKETGIR
                     LTVTPHVTNNRQILMKLHTERSAIQPLAAADLGFIFQKQKADNQLLVNDGETAVIGGL
                     TVTSVTKNRSGIPLLGGLPIVGKLFSFTEESENRRDLIILVTPRITDDGMSQE"
BASE COUNT          938 a         2395 c         2318 g         1080 t
ORIGIN      
        1 acggtcgccg ggagaccgca cagccgccgg gccaggttga tgcccgcaag gagcccggtg
       61 ccgagcgact cggtatagcc ctccacgccc gtgagctgcc ccgcgaagaa gagccggtcg
      121 tcgtcccgcg ccgtgagtgc agggccgagg gtggccgggc tgttcaggta cgcgttccgg
      181 tggatgctgc cgtagcggag gaactccgct tcgccgagcc ccggcagcgt ccggaacacc
      241 cgctgctgct cggcgatccg gagccgggtc tgaaagccga ccaggttcca catctgcccc
      301 gcgcggtctt cccgccggag ctggaccacg gcgtaaggct cccgaccggt gcgggggtcg
      361 ggcagcccga ccggcttcat cggcccgaat cgcagcgtct ccctcccccg gcgggccatt
      421 tcctccaccg ggaggcagcc ctcgaagtag gggacctggt cgaagtcgtg ggcctggtac
      481 tggtccgccg cgatgagccg atcgaggaag cgctcgtagc cctcgcggtc cagcgggatg
      541 ttgaggtagt cgtcgccgcc gcccttcccg taccgggaga gcgcatagag cggcccgtgg
      601 tcgagcgagt cgtccgcgac caccggcgcg atggcgtcgt agaacgcgag ggacgaggcc
      661 ccgagccggg cggcgatggc ctgcgccaga cgctcggagg tgagcgggcc ggtcgcgacc
      721 accgccggcg aaggcagctc ggtcacctcg ccgcgcacca cggtgatgtt gggatgggcg
      781 gtcacccgct cgtggaccgc gcgggagaag acgtctcgat ccacggcgag cgcggtgcct
      841 cccggcaccc gggcctcgtc ggcgcacggc agcagcaggc tgcccagggc gcgcagctcg
      901 gccttgagca acccatgcgc gttggtgagg tccaccgact tgaaggtgtt gctgcagacc
      961 agctcggcga ggcgatcggt gcggtgggcg ggcgtgggaa cgacaggccg catctcgtgc
     1021 agggtcaccc ggacgccgcg ctccgccagc gcccaggccg cctccgagcc ggcgagcccg
     1081 ccgccgacga cggaggcgct cacgccagcg ccacctcctc gggctcggcg agaaccagct
     1141 tgtgcttgca gcggaggcag gtgcgggtct cgccctcggc cttgctgacc ttcttctcca
     1201 tcccgaccca gccacactcg gggcaggtct cgaccaccgg gcggttccag gtggagaagt
     1261 cgcacgccgg gtagcggacg cagccccaga acgacttgcc gcgcttggtc cgccgctccg
     1321 cgaggtcgcc ctcgaggcac ttggggcatt ttacgccgat cgggatggcg cgagtgccct
     1381 tgcacgccgg ataggtggtg caggcgagaa actcgccgaa ccggccggtc ttgatcacca
     1441 tcggcgagcc gcagaggtgg cacttctcgt cggtcggccg gtcgggcgcg cgctgcttcc
     1501 tgagcgactt cacgtagtcg caggtgtcct tgtacttggt gcaggccagg tagggaccga
     1561 agcgcccggt cttgagctcg atgggcgagc cgcacttggg gcagcgctcc ttggccaggt
     1621 cctccgggtt gagtccgtgg gcgtcggcca ccagcgcgtt catgtccacc gcctcgagcg
     1681 ccttggtgaa cggcccgtag aactcggcca gcacgtgctg ccagcccagc tcgccgtcct
     1741 cgatccggtc gagctcgttc tccatcccgg aggtgaactc gacgttgaag atctcgggga
     1801 acttcgcgac catgatcttc tccaccagct cgcccagctc cgtggggaag aagcggcgct
     1861 gctccacccg cacgtactcc cgggcggaga gggtcgagat gatcgcgctg taggtggacg
     1921 gccggccgat gccgagccgc tccagctcct tcaccaggct ggcctccgag tagcgcggag
     1981 gaggctcggt gaagtgctgc gacggcgtga tctccttcac gtccacccgg tccccctgcg
     2041 ccagcggcgg gatgggcggg agatcctcca cctgccggcc ctcctccttc tcgcggccct
     2101 cggtatacag gacgtgatat ccatcgaaga ccatcaccga tccggtggcc cggaacaggt
     2161 accggccgag gtcgaactcg accacggtca tgtcgtagac cgccgggttc atctgcgatg
     2221 ccacgaagcg ctgccagatg agctggtaca accggaactg gtcgggctgc agataccgct
     2281 ggatctggtc ggggtgccgg cggacgtcgg tgggccggat ggcctcgtgg gcaccttgga
     2341 cccgggcgtt cttccggtcg ctgtatgcgt tcggctgggc cgggagatac gccttgccgt
     2401 agcgctcgcc gatgaggtcg cgggcggccg ccaccgcggt gtccgccacg cgcaccgagt
     2461 cggtccgcat gtacgtcacc aggccgaccg gcccctcctc gcccacgtcg atgccctcgt
     2521 agagatcctg tgccgcccgc atggtgcgcc gggaggagaa gccgagcttc ttggccgctt
     2581 cctgctgcag ggtgctggtg gtgaagggtg cggccgggcg cttgttccgg cggcgctgct
     2641 cgaccttggt gacgacgaag gggagcgagc gcacggcgtc caccacggcg cgggcgtcgg
     2701 tctcgctgtg cagttgcggc ttgtggccgt ccaccttcac cagcgaggcc tcgaaggtct
     2761 gccccttgcc ttcgcacagc gcctcgatgg tccagtactc ctggggcttg aacgcccgga
     2821 tctcccgctc gcgctcgacg atcagcctga gggcgacggt ctggacccgc cccgcggaca
     2881 ggcccgtctt gatggtccgc cagaggatgg ggctggcctt gtagcccacc agccggtcga
     2941 ggatccggcg ggcctgctgg gcatccacct tccgctcgtc gatctgccgc ggctcccgca
     3001 tggcggcgag cacggcgtcg cgggtgatct cttcgaacag cacccggtgg accggggcct
     3061 tggaatcgag ctggtcggcc acgtgccagg cgatggcttc gccttcccgg tcggggtcgg
     3121 tggccaggta gatggtcgag gcgcccttgg cggccttctt cagctccgag agcgtcttgg
     3181 tctttccttt aatggtgacg tacttgggct cgaacccacg ctccacgtcc acccccagct
     3241 cccgggtggg aagatcgcgg agatggccga cggtcgcctt cacctcgtac ccggagccca
     3301 ggtacttccc gatggtcttg gccttggtgg gcgactcgac gatgacgagc gcaccccggc
     3361 ccccgcctcc ggccgctccg tcccgaccgg ccttggaggc cttggcccgg ggcttcgcct
     3421 tgccgccgct gggcgcggca ggcttggggg tggccccctc actgcggttc ggggcaggct
     3481 tctttgccgc tcgcttgggt cgtgtcgcca tgtctggagt gtaatctccg gtctcaccgt
     3541 gtggtcaatt tcgggaccag caaaaaaggg gcgggggcgg gtaggcgcaa ggcagtcaca
     3601 tgcaaaacat gaccgcagaa cgggttagcc gattgatccc ggatcccgag cgcaccaagg
     3661 gacgccagga ctcaccagcc cccgtgcttc cgggcgacgg ccaggacccc ctccaccacc
     3721 tgttcctccg taccccgctc cgtcgccacc tcaaaatcag cgagcctgta gaacggttcc
     3781 cgggcctcca ggagcttgcg cagccgctcc accgggtccg ctcccgccag cagggggcgg
     3841 gtctcgcctt ggtccagccg tttcgcggcc gtggccgccc cgcaggagag gtagatccgg
     3901 aggcaggagg actcccgggc ccagtgcatg tgtcctggct gggccgccca ccccccgccc
     3961 ggtacgatca ccgccggctg ctccgccgcg accgcggcct gcacggcctt gtgctccatc
     4021 tcgcggaacc tgggctcccc gaccatcccg aagatctgga ccaccggcat gcccatttcc
     4081 cgcaccagca gctggtcgat gtcgaacagg ggtgcgccga gggactcggc cacccggcgt
     4141 ccgacggcgc tcttcccggc gccgggcagg ccgaccagca ccagatggtg tggcatcagc
     4201 ccgcaccggc ctcgctgcgg ctcccgctcc accgcgcgcc cagggaggcg aggtacgcct
     4261 ggtggttccg ccgcatctcg ctcagcgaat cgccgccgaa cttctccagc atggcgtccg
     4321 ccagcgcgat cgcgaccatc gcctccgcga tcaccccgag cgccggtacc gcggtcacgt
     4381 cggagcgctc gctctgggcg ttggccggct cgccggagga gaggtccacg gtcggcagcg
     4441 gcgccatgag ggtcgagatg ggcttcatcg ccacccgcag cacgaccggc tcgccggtcg
     4501 tgatcccgcc ctcgaggccg ccggcgttgt tgctgcgccg acggaagcct ccgcgccgat
     4561 ctcccgcgtg cggcgggcct cggaccccat cgttccgctc ctccgcggca tgaatcgcgt
     4621 cgtggacctg ggagccgggc cggcgcgccg cctccacgcc caagccgatc tcgaccgcct
     4681 tgaccgcggg gatggacatc aggagccccg cgagccttcc gtcgagcttg cggtcccagc
     4741 tcacgtgact gcccaggccc accaccacgc cgcgggccac cacctcgact tcgccgccga
     4801 gcgtgtcacc cgcctttttc gcctcgtcga tgcggcggac gatttccggc tcgaccgagc
     4861 ggtccagcac ccgcacctcg gagcgatcgg cggtctcatt gagcggcacc ggcagctccg
     4921 ccggtcgggg cacctggacg ccgccgaggc tgaccacgtg gctgccgacc tccacaccga
     4981 actcgtcgag cagccgccgg gccagcgcgc cggccgccac ccgcgccgcc gtctcccgcg
     5041 cgctggcgcg ctccagaatg tcgcgcgcgt cgagccggtc gtacttgaga acgcccgcca
     5101 ggtcggcgtg tcctggccgg gggcgggaaa cgcgccggcg ccgcagctcg cccggctcgg
     5161 ccgattcatg ggccatgacg tcctcccagt tggcccagtc gcggttggcg atgagcatgg
     5221 ccaccggaga gcccagggtc tcgcccgcgc gaaccccggc gagccactcg atccggtccc
     5281 gctcgatctt catgcgcgcc ccccgcccgt agccctgcat ccggcgggcg aggtcgcggt
     5341 ccaccgcctc cgccgcgacc ggcagcccgg ccggcaggcc ctcgaccacg gccacgaagg
     5401 ccttgccatg ggactcgccg gcagtggtga agcgcaggtg catggtcgcc tcggcggtaa
     5461 ggcggaaggg cggcagggct tccgagccgg cgtaaaatgg ctgaacggcg gaaggataac
     5521 cattccgccg ttccgccgtc cgccttaccg ccgtaccgcc ctaccgccta ctcctgcgac
     5581 ataccgtcgt cggtaatccg cggtgtgacc aggattatga gatcgcgccg gttctcgctc
     5641 tcctcggtga aggagaagag cttgcccacg atcggcaggc cgccgaggag cgggatgccg
     5701 gagcggttct tggtcaccga ggtcacggtg aggccgccga tgaccgccgt ctcgccgtcg
     5761 ttcaccagga gctggttgtc ggccttctgc ttctggaaga tgaagccgag gtccgccgcc
     5821 gcgagcggct ggatcgcgga acgctcggtg tgcagcttca tcaggatctg ccggttgttg
     5881 gtgacgtgcg gggtgaccgt gagacgaata ccggtctcct tgaactgcac gttggcgcgg
     5941 gccgtgccgc cctgaccccc gctggacgcg tcgatgacgc ggaccggggt ctcctcaccc
     6001 acgaggatgt cggcctcgcg gttgtcgagg gtcgagatga ccggctcggc ctggatgtcg
     6061 gccagctcgg tgcgctccag cgcactgagg aacgtggtca gcgagaagcc gccgatggcg
     6121 gtggagtaga tcagatccag cgccgacccg gtgatgctcg cctcggcatt gccgatggcg
     6181 gagacgctgt tgccacccag gttgatgacc tggacgttcc ggtcgaaggt ctcgccggtg
     6241 ctggggtcgc ggcgctgcac cagacggttg aagaactggc tccggtcgcc cagatcgtac
     6301 ttcacgccga gctgctcgat gtcggtccgg tccacgaaga tgatcttggc ctggatcgac
     6361 agctgcggcg tccggacgtc gagcccgcgg acgaactcgg tgacgttctg gacccggctg
     6421 cgggtgtcgg tgatgatgag cgagttggag ccggtgtcgg ccactacccg cccgcggccc
     6481 ttggtcagga tgctctcgac cgtcttctcc agcgagccgg cgtgggcgta gttgatccgc
     6541 accacgctgg tctccagcgg ctccagcgag tccagcgcgg agagcacgcc cggggcatcc
     6601 acccggatga tgccgcccga catctcctgg gcggagaggc cctggctcgc caggacggcc
     6661 tggaaggcca gcggccaggg ctggttcttc acctcggccg tgacttcacc cttcacgtcc
     6721 ttgccgatga t
//
LOCUS       DASUYN010000411         3071 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1009001, whole genome shotgun sequence.
ACCESSION   DASUYN010000411 DASUYN010000000
VERSION     DASUYN010000411.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3071
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1009001"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2360
                     /locus_tag="VF061_08020"
     CDS             <1..2360
                     /locus_tag="VF061_08020"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX6669487.1"
                     /translation="SILTLALGIGANTAVFSMIRGVLLRPLPYEHGERLVYLRQPAPL
                     GGVANAQFSPLELADYRQRSRALDAIVEYHSMPFILLGRGEPRRVQTGVVSANYFDVL
                     GLRPLLGRTFRPGEDQTGAEPVLVLSYGFWQNRLGGDPAIVGRTFEMNDRIHTVVGVM
                     PPVPQYPAENDVYMPASSCPFRMSPFTLNTRTARLLHLFGRLTPATAVAQAQTELEGI
                     AATLRSEHPAAYPSGQGFTISATSLHDELTRDARPTLLLLLGTTAFVLLIACANIANL
                     TLARLTRRSREMALRAALGADRMRLFRQMLTEGGLLALAGGLLGLALAAGAMRLLTGF
                     AARFTPRADEIALDGQVLAFTLIVCVLTGLAFAVLPALPSRANLVSALKEGGAAVSGA
                     GSSRVRAALVVAQVAVSMVLLVGAGLMLRSLLELQSVNPGFDSQRVLTMTLDLNWSRY
                     TTSDLIHGFHDRLHARLARQPGVVSSASTLTFPLDGHRRFNVSFLIEGMPPAEDGAQP
                     LGDLRSASPEYFPSLGIPLVTGRLFSPSDGPSSPQVAIVNQTLARRHWARESAVGKRI
                     SADTGKTWITIVGVVGDVRHYGLESEPSDEVYLPFAQLPIRESTFLVRTTADPGAMAR
                     RVAEEVLALDAAQPVANVQTLEEVRGEALASPRLTTTLLLLFSLLALCITAAGLGGVV
                     AFSVSQRTQEIGVRMALGAGRAEVLGMVLREGLRLVGLGLVLGALAAVLLSGLLAGLL
                     FHVETTDPLTFAGMALVLVLIAAAACLVPARRAATVDPLVALRAC"
     gene            2529..>3071
                     /locus_tag="VF061_08025"
     CDS             2529..>3071
                     /locus_tag="VF061_08025"
                     /inference="COORDINATES: protein motif:HMM:NF024884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4118 domain-containing protein"
                     /protein_id="HEX6669488.1"
                     /translation="MTDSGVTQAVELVRGRFREGLIRPRRGWKRAAETVWGPLLTLAT
                     LIVLDLLARAGTPMLQPFPLLLLTVVISAYLGGLRTALISAVLTVLYGVHFFAQPDLP
                     LRYRPGGAMSLLVLGLIAPAVAVLVSRLHASARRGRAAELSRAEAEALDRRVSLLSQA
                     SSTLASSLDYEVTLRELTRLL"
BASE COUNT          356 a         1169 c         1035 g          511 t
ORIGIN      
        1 tgtccatact cacgctggcc ctgggcatcg gcgccaatac cgcggtgttc agcatgattc
       61 gcggcgtgct gctgcgcccg ctgccgtacg agcacggtga gcgcctggtg tacctgcggc
      121 agcccgcccc gctgggcgga gtggcgaacg cgcagttctc tccgctggag ctggcggatt
      181 atcggcagcg aagccgcgcc ctggacgcca tcgtcgagta tcactcgatg cccttcattc
      241 tcctgggcag gggggagccg cgccgggtcc agaccggggt cgtctcggcc aactacttcg
      301 acgtgctcgg ccttcggccg ctcctgggcc ggaccttccg gccgggcgag gatcagacgg
      361 gggcggaacc ggtgctggtg ctcagctacg ggttctggca gaaccgtctc ggcggggatc
      421 cggcgatcgt gggccggacc ttcgagatga acgaccggat ccacaccgtg gtgggcgtga
      481 tgccgccggt gccgcagtac ccggcggaga acgacgtgta catgccggcc tcgtcctgcc
      541 ccttccggat gtccccgttc accctcaaca cccgcaccgc ccggctgctg cacctgttcg
      601 gccggctgac gcccgcgacc gccgtggcgc aggcgcagac ggagctggaa gggatcgccg
      661 ccacgctccg gtcggaacac cccgccgcct atccctccgg gcagggcttc accatttccg
      721 cgacctcgct gcacgacgag ctcacccggg acgcgcggcc caccctgctt ctgctgctcg
      781 gcacgaccgc cttcgtcctg ctcatcgcct gcgccaacat cgccaacctg accctggcga
      841 ggctcacccg gcgctcgcgg gagatggcgc tccgcgccgc gctcggcgcc gaccggatgc
      901 gcctcttccg ccagatgctc accgagggcg ggctgctcgc tctcgcgggc gggctcctcg
      961 gcctcgccct cgccgccggg gccatgcggc tcctcaccgg ctttgccgcg cgcttcacgc
     1021 cccgggcgga cgagatcgcg ctggatggcc aggtgctggc gttcaccctg attgtctgcg
     1081 tgctcaccgg gctggccttc gccgtcctgc ccgctctccc ttcgcgcgcc aacctggtct
     1141 ccgccctcaa ggaaggcggc gcggccgtga gcggggcggg gtcgagccgg gtccgggccg
     1201 cgctggtcgt ggcgcaggtc gccgtgtcca tggtgctgct ggtcggcgcc gggctcatgc
     1261 tgcggagcct cctcgagctc cagtcggtga acccgggctt cgacagccag cgggtgctca
     1321 ccatgaccct cgacctcaac tggtcccgct acaccaccag cgatctgatc cacggcttcc
     1381 acgatcgcct gcacgcccgg ctcgcgcgcc agcccggcgt cgtctccagc gcctccacgc
     1441 tcacctttcc gctggacgga catcgccgct tcaacgtgag cttcctgatc gaggggatgc
     1501 cccccgcgga ggacggcgcg cagccgctgg gcgaccttcg gagcgcctct cccgagtact
     1561 tcccctccct cggcattccc ctggtgaccg ggcggctctt cagcccgtcg gacgggccga
     1621 gctcgcctca ggtggcgatc gtcaaccaga cgctcgcgcg gcgccactgg gcgcgcgaga
     1681 gcgcggtcgg caagcggatc tcggccgata ccgggaagac ctggatcacc atcgtgggag
     1741 tcgtgggaga cgtgcgccat tacgggctcg agagcgagcc ctcggacgag gtctacctcc
     1801 ccttcgcgca gctgccgatc cgggagagca ccttcctggt gcgcacgacg gccgatcccg
     1861 gcgccatggc ccggcgggtc gcggaggaag tcctcgcgct cgacgccgcc cagccggtgg
     1921 ccaacgtgca gacgctggag gaggtccgcg gtgaggccct ggcgagtccg cgcctcacga
     1981 ccacgctgct gctcctcttc tccctgctcg cgctctgcat cactgccgcc ggcctgggcg
     2041 gcgtcgtcgc gttctcggtg agccagcgaa cccaggagat cggcgtgcgc atggcgctcg
     2101 gcgccggccg cgcggaggtc cttgggatgg tgctccgcga gggactccgc ctggtcggcc
     2161 tgggcctggt cctcggcgcc ctggccgccg tcctcttgag cgggctcctg gccggcctcc
     2221 tcttccacgt ggagaccacc gaccccctca ccttcgcggg catggccctg gtcctggtgc
     2281 tgatcgccgc ggcggcctgt ctggtccccg ccaggcgggc cgcgacggtg gaccccctgg
     2341 tcgcgctccg cgcctgctga cctccttttg gggcgacccc gggccggggg gctgtaagca
     2401 gtctcacaga ctccccccgg cccggggaac atcttcgtct cgtcacccct cccccgcccc
     2461 cacacttcct gcgaggttgg ggggtccgta ttctcattcg gcgcccgcgg gcctggatcg
     2521 gagtggcgat gacggacagc ggtgtcaccc aggcggtcga gctggtccga ggcagatttc
     2581 gtgagggtct gatccgaccc cggcgcggct ggaagcgcgc cgcggagacg gtgtggggtc
     2641 cgctgctcac cctcgccacc ctcatcgtgc tcgacctgct ggcccgcgcc ggcacgccca
     2701 tgctgcagcc gttccccctg ctgctcctca ccgtcgtaat ctccgcctac ctgggcggcc
     2761 ttcggaccgc gctcatcagc gcggtgttga ccgtgctgta cggcgtgcac ttcttcgccc
     2821 agccggatct gccgctgcgg taccggccag gcggcgccat gagcctgctg gtgctgggcc
     2881 tcatcgcgcc cgccgtcgcg gtcctggtgt cgcgtctaca cgcctcggct cgccgcggcc
     2941 gcgcggccga gctgtcgcgc gcggaagcgg aagcgctgga tcggagggtc tcactgctgt
     3001 cgcaggcgag cagcacgctg gcgtcgtccc tggactacga ggtgaccctc cgcgagctca
     3061 cccgccttct g
//
LOCUS       DASUYN010000412         2051 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_125441, whole genome shotgun sequence.
ACCESSION   DASUYN010000412 DASUYN010000000
VERSION     DASUYN010000412.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2051
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_125441"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..353)
                     /locus_tag="VF061_08030"
     CDS             complement(<1..353)
                     /locus_tag="VF061_08030"
                     /inference="COORDINATES: protein motif:HMM:NF018232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1097 domain-containing protein"
                     /protein_id="HEX6669489.1"
                     /translation="MDALVALALSIGVLIAGWTYLAVGVAALPVWAGIVAWGCFFAAG
                     GKAEGLVKTIVSNLSGVLWAFLALYLWNSMGGGVPLLALLVGVAAFIMVIQAKIPALS
                     FIPGAFLGAATAVSVV"
     gene            513..1061
                     /locus_tag="VF061_08035"
     CDS             513..1061
                     /locus_tag="VF061_08035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669490.1"
                     /translation="MPRVPQVHYDSAPPEVREAHDDHLRRHARITNMKRTLLNSLPAF
                     QALMEWYPLRDTVQPFLGPRLTVLFAHAISAETDCLICSTFFRRILIEEGEDPDRLAL
                     DERERAVVDYGRRLAVSPFRVPDEVYGRVAPYFDHAQMTALTAFGAIMVATNVFNNAL
                     EVELDEYLHPYRREPAGSGHVG"
     gene            1051..1857
                     /locus_tag="VF061_08040"
     CDS             1051..1857
                     /locus_tag="VF061_08040"
                     /inference="COORDINATES: protein motif:HMM:TIGR03971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mycofactocin-coupled SDR family oxidoreductase"
                     /protein_id="HEX6669491.1"
                     /translation="MSAEFAGKVAFVTGAAHGQGRATALALAREGARVAALDVARPLS
                     YPGYGMGSPDDLASLARACADAGSECLTFAGDVRNDADVTAAVDTTVERFGRIDILFN
                     NAGICAYGLAHELTEEAWDAMLDINLKGAWLVARRVIPVMIRQGAGVIINNSSVAGLR
                     GMNRLSHYAASKWGLTGLTKSWAIELAPHGIRVNSIHPTGVNTPMNDGLAALEGLTPR
                     EIAERSAGNLLPVPWIEPEDVAAAVLYLASDRARYVTGAPLVLDAGLLTR"
BASE COUNT          317 a          727 c          704 g          303 t
ORIGIN      
        1 accacactga ccgccgtcgc ggcaccgagg aatgccccgg ggatgaagga gagcgcgggg
       61 atcttggcct ggatgaccat gatgaacgcc gcgacaccca ccaggagggc gaggaggggg
      121 acgccgccgc ccatgctgtt ccagagatag agcgcgagga aggcccagag caccccggag
      181 agattcgaga cgatggtctt gaccagccct tcggccttgc ctcccgcggc gaagaagcac
      241 ccccacgcca cgatgccggc ccagaccggc agggctgcca cccccacggc gagataagtc
      301 cagccggcga tcagaacccc tatactgagt gccagggcga cgagcgcgtc catgtaccac
      361 ctccggtgag gggaacggcg cgagcgggaa aaccaccctg ccggtattac ggtatagggg
      421 ggcggctgtc aaggattagg tgactccagc ggctccaccc gccggtcgtt gctgaataca
      481 ttccagccag gtcaccgtcc cggagcccta tcgtgcccag agtcccccag gtccattacg
      541 actccgcccc gcccgaggtc cgggaggcgc acgacgacca ccttcggcgc catgcccgca
      601 ttaccaacat gaagcggacg ctgctgaact ccctgccggc gttccaggcg ctcatggagt
      661 ggtatccgct ccgtgacacc gtgcagccct tcctcggccc tcggctcacg gtcctcttcg
      721 cccacgcgat ctccgccgag accgactgtc tcatctgctc cacgttcttc cgccggatcc
      781 tgatcgagga gggcgaggac ccggaccggc tggcgctcga cgagcgggag cgcgcggtgg
      841 tggactatgg ccggcggctg gcggtctccc ccttccgggt gccggacgag gtgtacgggc
      901 gggtcgcccc ttacttcgat cacgcgcaga tgaccgcgct caccgcgttc ggcgccatca
      961 tggtggccac caacgtgttc aacaacgcgc tggaggtgga gctggacgag tatctccatc
     1021 cctatcgccg ggagccggcg gggagcggtc atgtcggctg agttcgcggg gaaggtcgcc
     1081 ttcgtcaccg gggcggccca cgggcagggc cgggcgacgg ccctcgcgct ggcgcgggag
     1141 ggcgcgcggg tcgcggcgct ggacgtggcc cggccgctga gctatcccgg gtacggcatg
     1201 ggctcgcctg acgacctggc gtcgctggcg cgcgcctgcg ccgacgccgg gagcgagtgc
     1261 ctcaccttcg ccggggacgt ccggaacgac gccgacgtga ccgcggcggt ggacacgacg
     1321 gtggagcggt tcggcaggat cgacatcctg ttcaacaacg ccggcatctg cgcctacggt
     1381 ctcgcccacg agctcacgga ggaggcgtgg gacgcgatgc tggacatcaa cctcaagggc
     1441 gcgtggctgg tggcgcggcg ggtgatcccg gtgatgatcc ggcagggggc cggcgtcatc
     1501 atcaacaact cttcggtggc cgggctccgc ggcatgaacc ggctgagcca ctatgccgcc
     1561 tccaagtggg ggctgaccgg cctcaccaag tcgtgggcca tcgagctcgc cccccacggc
     1621 atccgggtga attcgatcca tcccaccggc gtcaacactc cgatgaacga cggactggcc
     1681 gcactcgaag ggctcacccc cagggagatc gccgagcggt cggcggggaa cctcctcccg
     1741 gtgccctgga tcgagccgga agacgtggcc gcggccgtgc tgtacctcgc ctcggaccgc
     1801 gcccgctacg tcaccggtgc tcccctggtc ctcgacgccg ggctgctgac ccgctgaccc
     1861 gcccggacgc ggcgctcccc aaggccatcg gacggctcgc gctcaccggg ctggtcctca
     1921 actccgtcat cggcagcagc gtcttcgggc tcccgtcggt catcgccggc cagctgggcc
     1981 gcgccagtcc ctgggcctgg gccctcgccg gtctaggcat ggtgctcgtg gttgccgcgt
     2041 tcgcggaggt g
//
LOCUS       DASUYN010000413         7217 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1010831, whole genome shotgun sequence.
ACCESSION   DASUYN010000413 DASUYN010000000
VERSION     DASUYN010000413.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7217)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7217)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7217
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1010831"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..585
                     /locus_tag="VF061_08045"
     CDS             <1..585
                     /locus_tag="VF061_08045"
                     /inference="COORDINATES: protein motif:HMM:NF012928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /protein_id="HEX6669492.1"
                     /translation="GEGMPIEAVDRAATAWGFPVGPIALLDEIGLDVAHKAAETMRAA
                     FGERMKGGNALDRMLAAGRLGRKNGRGFYRYRKGKKAGPDATVYGVLGARPAEGASGE
                     VIERRLVYAMLNEAAMACAEHVIRSARDGDVGALYGIGFPAFRGGPLRLIDDLGASKV
                     VSTLHELEDQYGERFRPAPALVEMAREGGRYYAA"
     gene            582..1424
                     /locus_tag="VF061_08050"
     CDS             582..1424
                     /locus_tag="VF061_08050"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX6669493.1"
                     /translation="MTAFLRLLAVAALCYLLMLLVLRLSEGRMLYVPGGRRTLLEPPA
                     ELDLAVRKVTVTAADGVRLVAWVMPLDPGSGPWLLICHGNAGNISEAGRPYHYAGLRE
                     QGLSLFAFDYRGYGESEGTPTEEGLYLDAEAAYHYLRDSLGVPPGRIVLFGHSLGSAV
                     AVELARRVPAAGLILDGALTSVVERAQELFPYIPVRWIAASRYPSIERVGQLSVPKLF
                     LHARDDEVVPLAHGQRLFEAAAPPKRFVELRGTHGDAFVEDSTAYYQAIGRFVAQLGR
                     GVGP"
     gene            1432..1959
                     /locus_tag="VF061_08055"
     CDS             1432..1959
                     /locus_tag="VF061_08055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669494.1"
                     /translation="MTPFSRRAGLLAVVLSGLASSAPAQESAPPPPRGCPAPEHRQFD
                     FWIGNWEVTTPAGKPAGRNSIEPILGGCALRESWTGAGGGSGTSYNAWDRQRRRWHQT
                     WVDNGGLVLRLEGEFTGGRMVLSGETLDSAGAAVLNRITWQETGPGAVRQLWETSSDR
                     GKTWAVVFDGRYRKQ"
     gene            2003..4285
                     /locus_tag="VF061_08060"
     CDS             2003..4285
                     /locus_tag="VF061_08060"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX6669495.1"
                     /translation="MSQPTPSTLPGGAVVADRYRLEDEIGRGGASTVYLAEDLKHGRK
                     VAIKVLRPVPGYEPQRFLREIRIAARLSHPQILPLHDSGEIEPDRPGAPRLLYFVMPY
                     AGCESLRDRMAREGQLPVDVALRITRAVATALGYAHRHGIIHRDIKPENILLQEGEPV
                     IADFGVATAISAAGGEGVYITDHGFAVGTPAYMSPEQASAEQGLDGRCDQYSLACVLY
                     EMLAGDPPFAGTGARATMARHAIEVPAPIGARRPNVPAAIERALARALAKEPADRFPS
                     MAEFAEALVAPVPEIIPAAAPGTAREARTIAVLPFVNASGDPENEYLSDGITDELILA
                     LGKVEGLNVASRTSVFALKGLKEDIRNLGARLGVSAVLEGTVRRAGHRLRITAQLIGV
                     AEGRTLWAERYDRELQDVFEIQDEIARTIVTTLRSTLLRDLGDAPPVRYTANLTAYHL
                     YLKGRYWWNRRTQSAIAEGIKYFERAIEEDAGYALAYTGLADSYALQIDYRGAPVREG
                     MGRARAMARKAIELDDTLGEAHTSLAWVTFVYDWDWPAAAERFRRAIELNPSYSVARQ
                     WYSWFLIAMGRTEAALAEGRIAVELDPASVSIRRSMGWLHYYARQPGEALEHLRRALA
                     MNPTAEETHRLLGVAYLQLGLHDESAAAFREAVASSESPTLATAGLGLVSAAKGKLTD
                     ARGILDGLYAESREHYLSPVAFVMLHAGLGETDRAFEWLDRAHEDRRGWLAYLKVEPL
                     LDPLRSDPRFTRLLERMRLA"
     gene            4511..5452
                     /locus_tag="VF061_08065"
     CDS             4511..5452
                     /locus_tag="VF061_08065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011646078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HEX6669496.1"
                     /translation="MSFIGIDVAKAQLEFACRPGGETGAVPNEEWGIAELVERCRAFA
                     PTLIVCEATGGYEAALVAALATTGLPVVIANPRQVRDFAKATGQLAKTDAMDAQILAL
                     FAERVRPEPRALPDEALKGLEALLTRRRQLVEMLTAERNRLLVARPTVRRDLQQHIRF
                     LERRLREADDDLHTAVKASPLWRVKDDLLQSVPGVGRVVSLTLLAELPELGRLSHKEI
                     AALVGVAPLNRDSGTLRGKRLVYGGRAPVRAALYMAALVASKCNPVIRAFYQRLRAAG
                     KPTKVALTACMRKLLTILNAIARDGVPWQPARGLVST"
     gene            5701..6879
                     /locus_tag="VF061_08070"
     CDS             5701..6879
                     /locus_tag="VF061_08070"
                     /inference="COORDINATES: protein motif:HMM:NF012870.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS481 family transposase"
                     /protein_id="HEX6669497.1"
                     /translation="MPWQEVVTVELRQQFVHDALRRVVPVTELCAAYGISRKTGYKFL
                     ARYEALGAAGLADQSRRPHRSPAALDPVLLQRLLEAHHRHPYWGPRKLLHLVSQRWPQ
                     APWPVRSTVARCFQHLGLVTARRRVRRPGSAGPPAVPMEAPNAVWTTDYKGQFKLGDG
                     QYCFPLTVADGYSRLLLACQALTSTKLVEARPVFERLFREYGLPRRIRSDNGVPFATQ
                     ALSRLSSLAVWWIRLGILPDLIEPGAPQQNGRHERMHLTLKRECTRPPRHDRRQQQRC
                     FDRWRQEYNSVRPHEALGDATPASLYTPSARPYPARLPPLEYPGHYEVRRVSHNGGIR
                     WHKQWVNVSQTLGEEYIGFVEIDDGEWDVYFGPLRLGRFHERTLLIEDALGRQYRRRY
                     "
     gene            complement(6940..>7217)
                     /locus_tag="VF061_08075"
     CDS             complement(6940..>7217)
                     /locus_tag="VF061_08075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX6669498.1"
                     /translation="FHGFKDSYDDMTFTEPTLQSITARTLIVHGDRDLFFPIAIPVQA
                     YEAIPRSYLWIVPNGSHVPIFEPQAREFQGLALPFLDGDWDKEASPR"
BASE COUNT         1063 a         2614 c         2440 g         1100 t
ORIGIN      
        1 ggcgagggga tgcccatcga ggcggtcgat cgcgcggcga ccgcctgggg ctttcccgtc
       61 gggccgatcg cgctgctgga cgagatcggg ctcgacgtgg cgcacaaggc ggcggagacg
      121 atgcgcgccg cgttcggcga gcggatgaag ggcggcaacg ccctcgaccg catgctggcc
      181 gccggccggc tcggccgcaa gaacggacgc gggttctacc gctatcggaa gggcaagaag
      241 gcgggccccg acgccacggt ctacggggtg ctcggcgcgc gtccggccga aggcgcgagc
      301 ggcgaggtga tcgagcggcg cctggtgtac gcgatgctga acgaggcggc gatggcgtgc
      361 gccgagcatg tgatccgcag cgcccgcgac ggcgacgtcg gcgcgctgta cggcatcggc
      421 ttccccgcgt ttcgcggcgg gccgctccgg ctcatcgacg atctcggcgc ctcgaaggtc
      481 gtgtccacgc tgcacgagct ggaggaccag tacggcgaac gcttccggcc cgcgcccgcg
      541 ctggtcgaga tggcgcgcga gggcggccgc tactacgccg catgaccgcc ttcctgcggc
      601 tgctggccgt cgccgcgctg tgctacctcc tcatgctcct ggtcctgcgc ctcagcgaag
      661 gtcgcatgct ctacgtgccc ggcggcaggc ggacgctgct cgagccaccg gccgagctcg
      721 acctggccgt gcgcaaggtg acggtcaccg ccgccgacgg cgtgcgcctg gtcgcctggg
      781 tgatgccgct ggaccccggc tccggcccct ggctgctcat ctgtcacggc aacgcgggga
      841 acatctccga ggcggggaga ccctaccact acgcgggact gcgggagcag gggctgagcc
      901 ttttcgcctt cgactaccgt ggctacggcg agagcgaggg cacgccgacc gaggagggcc
      961 tctacctcga cgccgaggcg gcataccact atctccgcga ctcgctcggc gtcccgcccg
     1021 ggcgcatcgt gctcttcggc cactccctcg gctcggcggt cgcggtggag ctcgcgcggc
     1081 gggtgcccgc cgccggcctg atcctcgacg gcgcgctgac ctcggtcgtg gagcgggccc
     1141 aggagctgtt cccgtacata ccggtccgct ggatcgccgc cagccgctat ccgtccatcg
     1201 aacgggtcgg gcagctgagc gtgcccaagc tgttcctgca cgcccgggac gacgaggtcg
     1261 ttcccctcgc gcacgggcag cgcctgttcg aggccgcggc cccgcccaag cggttcgtgg
     1321 agctccgggg cacccacggc gacgcgttcg tggaggactc gaccgcctac taccaggcca
     1381 tcggccggtt cgtggcgcaa ctcgggaggg gggtcggccc gtagggaacc catgactccc
     1441 ttctcccgcc gggccggtct tctcgccgtc gtcctgtccg gtctcgcgtc atccgctccc
     1501 gcccaggagt ccgctccgcc gccaccacgg ggctgcccgg cgccggagca ccggcagttc
     1561 gacttctgga tcgggaactg ggaggtcacc acgcccgccg gcaagcccgc cggccgcaac
     1621 agcatcgagc ccattctcgg gggctgcgcg ctgcgggaaa gctggaccgg tgccggcggc
     1681 ggcagcggca ccagctacaa cgcctgggac cgtcagcgcc ggcggtggca ccagacctgg
     1741 gtggacaacg gggggctggt cctgcggctg gaaggcgagt tcaccggagg caggatggtg
     1801 ctcagcggcg agaccctgga ctccgccggg gccgcggtgc tgaaccggat cacctggcag
     1861 gagacggggc cgggcgcggt acggcagtta tgggagacgt cgtccgaccg ggggaagacc
     1921 tgggcggtgg tgttcgacgg gaggtatcgg aagcagtaga cctgacagcc gcccctccgg
     1981 caggcgtgta cctttcctcg tgatgtcgca gcccacccct tccactctgc caggcggcgc
     2041 cgtcgtggcc gaccggtacc ggctcgagga cgagatcggc cgcgggggcg cgtccacggt
     2101 gtatctggcc gaggacctga agcacgggcg caaggtcgcc atcaaggtgc tccggccggt
     2161 tcccggctac gagccccagc gcttcctccg cgagatccgc atcgccgccc ggctctccca
     2221 cccgcagatt ctgccgctcc acgactccgg cgagatcgag cccgaccggc ccggggcgcc
     2281 ccggctcctc tacttcgtca tgccctacgc cgggtgtgag agcctgcggg accggatggc
     2341 ccgggaggga cagctccccg tggacgtcgc gctccggatc acccgcgcgg tcgccaccgc
     2401 gctcggctac gcgcaccgcc acggcatcat tcatcgcgac atcaagccgg agaacatcct
     2461 gctccaggaa ggggagccgg tcatcgcgga cttcggcgtg gcgaccgcga tctcggcggc
     2521 gggcggggag ggcgtctaca tcaccgatca cgggttcgcg gtcggcacgc cggcctacat
     2581 gagcccggag caggccagcg ccgagcaggg gctcgacggc cgatgcgacc agtacagcct
     2641 cgcctgcgtg ctgtacgaga tgctcgccgg cgacccgccc ttcgcgggca ccggcgcccg
     2701 cgcgacgatg gcccgccacg ccatcgaggt cccggcgccg atcggcgcgc gccggcccaa
     2761 cgtgccggcc gccatcgagc gcgcgctcgc ccgggcgctc gccaaggagc ccgccgaccg
     2821 cttcccctcg atggccgagt tcgccgaggc gctggtcgcg ccggtgcccg agatcattcc
     2881 cgccgccgcg ccgggcacgg cgcgcgaggc ccgcaccatc gcggtgctgc ccttcgtgaa
     2941 cgccagcggc gaccccgaga acgagtacct gagcgacggc atcaccgacg agctgatcct
     3001 cgccctgggc aaggtcgagg ggctcaacgt cgcttcccgt acctcggtgt tcgcgctcaa
     3061 ggggctgaag gaggatatcc ggaacctggg cgcccggctc ggcgtctccg ccgtgctcga
     3121 gggcaccgtg cgtcgcgccg gccaccggct ccggatcacc gcgcagctga tcggcgtcgc
     3181 cgagggccgc accctctggg ccgagcgcta cgaccgcgag ctgcaggacg tcttcgagat
     3241 ccaggacgag atcgcgcgga ccatcgtcac cacgctccgc tccacgctgc tccgcgacct
     3301 cggcgatgcc ccgccggtgc gctacacggc gaacctcacg gcgtaccacc tgtacctgaa
     3361 gggccgctac tggtggaatc gccgcaccca gtcggccatc gcggaaggga tcaagtactt
     3421 cgagcgggcg atcgaggagg atgcgggcta tgcgctggcc tacaccgggc tggcggactc
     3481 ctacgcgctc cagatcgatt accgcggcgc tcccgtccgg gagggtatgg gccgggccag
     3541 ggcgatggcg cggaaggcga tcgagctgga cgacaccctg ggcgaggccc acacctcgct
     3601 cgcgtgggtg accttcgtgt acgactggga ctggcccgcc gccgcggagc ggttccgccg
     3661 ggcgatcgag ctcaatccgt cctattcggt cgcgcgccag tggtactcgt ggtttctgat
     3721 cgccatgggc aggaccgagg cagcgctggc ggaggggcgg atcgccgtcg agctggatcc
     3781 ggcctcggtg tccatccggc gcagcatggg ctggctccac tactatgccc gccagcccgg
     3841 cgaggcgctg gagcacctgc gccgcgccct ggcgatgaac cccaccgccg aggagaccca
     3901 ccggctcctg ggcgtcgcct acctgcagct cggcctgcac gacgagtccg ccgccgcctt
     3961 ccgggaggcg gtcgccagct cggagagtcc cacgctcgcg accgccggcc tgggcctcgt
     4021 ctccgccgcc aagggaaagc tgaccgacgc gcgcggcatc ctcgacgggc tctatgccga
     4081 gtcccgcgag cactacctgt cgccggtggc cttcgtcatg ctccacgccg gcctgggcga
     4141 gaccgaccgc gccttcgaat ggctggaccg ggcccacgag gaccgccgcg gctggctggc
     4201 ctacctcaag gtcgagccgc tcctggatcc gctccgctcc gatccccgct tcacccggct
     4261 gctcgagcgg atgcggctcg cctgacgcct tgccgttcgg gttgcgggcc ggccttgtat
     4321 ctaccgatct attgaatccg tggtcagtat cgggggtgcg acagctcgtt cggcctaggg
     4381 tcctcgagac cgttcgttag cctgggcgtc gcaccgctcc ttcgctgaga gcccgaacag
     4441 ttgcgtgggc cacgagcccg catcctgcaa ggtggggccg acgcgagccg tttctccccc
     4501 gaggtgccct atgtcgttca tcgggatcga tgtggccaaa gctcagctcg agttcgcctg
     4561 ccggcccggt ggcgagaccg gcgctgtgcc gaacgaggag tggggcatcg ccgagctggt
     4621 agagcgctgt cgggcattcg cccccacgct gatcgtctgc gaagcgacgg gcgggtacga
     4681 ggcggcgctg gtcgcggcgc tcgcgacgac cgggctgccg gtggtcatcg ccaatccccg
     4741 ccaggtgcgc gacttcgcca aagccaccgg ccagctcgcc aagaccgatg cgatggacgc
     4801 tcagatcctc gcgctctttg ccgagcgggt gcggcccgag ccccgagccc tgccggacga
     4861 agccctcaag gggctcgaag ccctcctcac ccggcgccgg cagctagtcg agatgctcac
     4921 cgccgaacgc aatcgactgc tcgtcgcccg gccgaccgtc cggcgggatc tgcagcagca
     4981 catccgcttc ctcgagcgcc gcctgcggga ggccgacgac gacctgcaca ccgcggtcaa
     5041 ggccagcccg ctctggcggg tgaaggacga cctgctccag agcgtgcccg gggtcggccg
     5101 cgtggtctcg ctcaccctgc tcgctgagct gcccgaactc ggccgcctca gtcacaagga
     5161 gatcgctgca ctcgtcggcg tcgccccgct caaccgcgac agcggcaccc ttcgaggcaa
     5221 acgcctggtg tatggcggcc gcgctccggt gcgggccgca ctctatatgg ccgccctggt
     5281 cgccagtaag tgcaaccccg tgatccgcgc cttctaccag cgcctgcggg cggcgggcaa
     5341 gccgaccaag gtggccctca ccgcctgcat gcggaagctg ctcacgatcc tcaacgcgat
     5401 cgcgcgcgac ggcgtaccct ggcagccggc ccgtggactc gtgagcactt gattttcaag
     5461 acagttgcta acgacttgcg catcagctgc gggcgctcaa acctgcgcca gcacaatcct
     5521 tcgttccaca gcgtcctcga gggacgcggc gcccaagcgg agctccggac acttccggcc
     5581 cgtcggctgc atgcgcgggt taggccgcgc cctggtccag tctatataca ggggtaacac
     5641 ttaagtccga ggacataggt gacactaccg ccaggtttcg ggctcctcaa ggaggatccg
     5701 atgccgtggc aggaggttgt caccgtggag ctgcgtcagc aattcgtcca cgacgcacta
     5761 cgccgagtgg tgcccgtcac cgagctctgt gccgcctacg gcatcagccg gaagaccggc
     5821 tacaagttcc tcgcccgcta cgaagccttg ggagccgctg gcctggccga tcagtcgcgc
     5881 cgaccgcacc gctcacccgc ggcgctcgat ccggtgttgc tccagcgcct gctcgaggcc
     5941 catcaccgcc atccgtactg ggggccgcgg aagttgctcc acctcgtaag ccagcgctgg
     6001 ccgcaggcgc cctggccggt gcgttccacc gtcgcccgct gcttccagca cctgggcctc
     6061 gtcaccgccc gccggcgcgt ccgccgaccc gggtcggccg ggccgccagc ggtgccaatg
     6121 gaggcgccca atgcagtctg gaccaccgac tacaaggggc agttcaagct gggcgatggg
     6181 cagtattgtt tcccgctcac cgtggcggac gggtatagcc gcctgctgct cgcttgtcag
     6241 gccctcacca gcaccaagct ggtcgaggcc cggcccgtct tcgagcgctt gttccgtgag
     6301 tacggcctgc cccgacggat ccgctccgat aacggggtcc cctttgccac ccaggcactc
     6361 agccggctct cgtcgctcgc cgtctggtgg atccgcctgg ggatcctgcc cgatctcatc
     6421 gagcccggtg ccccacaaca gaacggccgg cacgagcgga tgcacctcac cctcaagcgc
     6481 gagtgcaccc ggccccctcg ccacgaccgt cggcagcaac agcgctgctt cgatcgctgg
     6541 cgccaggagt acaacagcgt gcgcccgcac gaggcgctcg gcgatgcgac tccggcctcg
     6601 ctctacacgc cctcagcccg cccctatcct gctcggctcc ccccgctgga gtatcccggc
     6661 cactacgagg tccgccgggt gagccacaac ggcgggatcc gctggcacaa gcagtgggtc
     6721 aatgtcagcc agaccctagg cgaggaatac atcggattcg ttgagatcga cgacggcgaa
     6781 tgggatgtct atttcggccc gctccgcctg ggccgattcc atgagcgcac tctcctcatc
     6841 gaggatgcgc tcggccggca gtaccgccgg cgttactaag acctgtcacc tatgtcttcg
     6901 gacttaactg tcacccatgt cctggactgt tcaaggtacc tatctcggtg acgcttcctt
     6961 gtcccagtcg ccatcgagaa atggcagcgc aagcccctgg aactcacggg cttgtggctc
     7021 gaatatgggc acatgagagc cgttcgggac tatccagagg taagaccgag gaatggcctc
     7081 ataggcctgg actggaatgg caattggaaa gaacagatcc cggtcgccgt gtacgatcag
     7141 tgttcgagcc gtaatcgact gcaacgtagg ctccgtgaag gtcatgtcat cgtagctgtc
     7201 cttgaagccg tggaact
//
LOCUS       DASUYN010000414         8058 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_349846, whole genome shotgun sequence.
ACCESSION   DASUYN010000414 DASUYN010000000
VERSION     DASUYN010000414.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8058)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8058)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8058
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_349846"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..780
                     /locus_tag="VF061_08080"
     CDS             <1..780
                     /locus_tag="VF061_08080"
                     /inference="COORDINATES: protein motif:HMM:NF039287.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HEX6669499.1"
                     /translation="GYERLWPADLHVIGKGITRFHCVIWPAMLLAAGLPLPTRVWAHG
                     YVQWEGTKMSKTAGTAVTLGDAIERHGSDALRYFLLREVGFEADGNFSWDRFDERYTA
                     DLADGLGNLVSRSLAMVAKYREGVVPPVTADTPLDEAGRKAVAAYGQAMDRCDLRGGA
                     EAAWELVATANLYIQQVAPWTLAKEGRQAELEVALAALARALYRLAVLAEPFMPGKAA
                     TIRASLGVEEARVDWESLEAPPVGGLETRRPEVLFPKPASV"
     gene            995..1915
                     /locus_tag="VF061_08085"
     CDS             995..1915
                     /locus_tag="VF061_08085"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEX6669500.1"
                     /translation="MAKRRWTVVFVPHDSEPSRIMEVSYRLVKTAIGGAVLAVGAALV
                     FGYVTVSRTVDLSQSARLAQENARLEQQLDELNGRLITLADTLSRISQRDARIRVLAN
                     LEPIDPQVQAAGIGGPTVGEVEGEAGTAMRRSSEIRVDLNALIRRANLLASSFKEATD
                     SLAVHSARLAATPSIMPTQGWLSSAFSSMRSHPILHVARPHEGIDVTAPMGTPIEAPA
                     GGTIRDAGWEAGYGNTIVIDHGFGTVTKFAHASKILVREGQRVSRGQRIALVGNTGLA
                     TGPHLHYEVHVNGRPVDPLRYVLPEHVVTD"
     gene            complement(2000..2563)
                     /locus_tag="VF061_08090"
     CDS             complement(2000..2563)
                     /locus_tag="VF061_08090"
                     /inference="COORDINATES: protein motif:HMM:NF015944.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HEX6669501.1"
                     /translation="MTRSVAVPSTLLALALLTSGCGYNTIQTMDERVNQAKGQIETQL
                     QRRADLVPNLVETVKGVAKQESTVFISIAESRARLSGAVQSGDVGQMAAANAELTQGI
                     GRLLAIVENYPELRSSESFRALQDQLEGTENRISVARQDYNTAVGEYNAYIRRFPYNL
                     TAKIFGQGAREYFEAAPGTETAPKVQF"
     gene            complement(2560..3282)
                     /locus_tag="VF061_08095"
     CDS             complement(2560..3282)
                     /locus_tag="VF061_08095"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HEX6669502.1"
                     /translation="MRDAVDRVVGPFLSQVDEVLGGGYSAVLFGSAARSDFVPGRSDL
                     NLMLITDDLSPARLSGLGAAFAGWRKSGYEPPLVILRSEWARATDVFPIEITDMRAGY
                     QVLRGPDPVAGLHVAPADLRHALEREFRGKLLRLRQGYVAAAGDAAALGGLAERSSGT
                     FLVLLRALLVLLGRPVPSEPGQVAAAAAAAMGIDGEPLLNVVRHRAERGWRCSPGEFE
                     GYLDAVARAAAFLDQLQLGDQR"
     gene            complement(3282..4121)
                     /locus_tag="VF061_08100"
     CDS             complement(3282..4121)
                     /locus_tag="VF061_08100"
                     /inference="COORDINATES: protein motif:HMM:NF016424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HEX6669503.1"
                     /translation="MSGTRVKAIALLTGLQLIAGALAAQDSGIRSLFPAQPTGYVTDA
                     AGVVDQAAEERITSLAERLRAATGAEIAVVTLPTIGEREEADVAREIGRAWGVGAVAE
                     IGDERRNAGVVVLVVPRQGGQPGTGRVRVEVGQGLEGIVTDVAAGRVRDLMGQRLARE
                     EYSGALQDGVEALAGLIARGYGVSDTALTNARPVSQPRGGGGRSLGALPILLFILFLM
                     LSGAFGGRRRRRRRSVFWGGPWIGGGWGGGGGWGGGGFGGGGFGGFGGGGGFSGGGAG
                     GRF"
     gene            4109..4876
                     /locus_tag="VF061_08105"
     CDS             4109..4876
                     /locus_tag="VF061_08105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669504.1"
                     /translation="MSRSIALPVLAASLVALAGLTACERPREVAVRVSIPGPDSVETP
                     VTGVGLVALPYDRDSVLAALETEAATPHPDTTALDSLFRAFQAPFARYTQAVQRTERL
                     RDTLEQLRSGLDSMPRDGPEYRERYAGFTRLDDSLAAARKAAERARGELDRARAEFAE
                     RGDPLRARIRHWEDSTYRGYDSITRNLAARRRQDPRTDTTGADGWAQFTLPPGAWWIY
                     GRSWDATDPNAEWYWNLPVTDDTILLSSRTGRQRRRY"
     gene            4876..5514
                     /locus_tag="VF061_08110"
     CDS             4876..5514
                     /locus_tag="VF061_08110"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HEX6669505.1"
                     /translation="MTRRVAALALGALLATGGDLAAQQQSTTAAATRAKGSPSAPVTV
                     YEMSDFQCPYCRRFALETFRAIEQEYISPGKVRWVFVNFPLTSIHANAVAAAATAVCA
                     ARQGAFWPMHDLLYQYQETWAPLKEPGPFFLSLADSAGISKPKLLECVKAPATEAEIR
                     YEAEGAERAGASSTPTFYIEGGLLAGAHPLPLFRQVLDSILATKAAGTRRDQ"
     gene            5724..7052
                     /locus_tag="VF061_08115"
     CDS             5724..7052
                     /locus_tag="VF061_08115"
                     /inference="COORDINATES: protein motif:HMM:NF016311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase N-terminal domain-containing
                     protein"
                     /protein_id="HEX6669506.1"
                     /translation="MGATPPVYRAAVRLASGLAPALALLSPKLAAGHRGRHGSAERLA
                     AWGSRHRDLRRPLIWLHASSVGEGLQAESVLLELRRRRPGAQYVYTHFSPSAESLAGR
                     LPVDAADYLPYDLPRTVESLLQALAPDLLVFAKLDLWPELAVRAAAHGTRVAMVAATV
                     SPGSGRLRWPVRSLLRPGYAAVCAAAAVADGDADRLARLGVSPDRIRVLGDPRCDSVV
                     DRIAEIAPDEPLLGFGRGAPTLVAGSTWPGDESVLLRSFARVLPSHPAARLILVPHEP
                     TEPHLLEAERAAAGLGLPVPVRLSRAREAVPLLLVDRVGVLAALYGAGTMAYVGGGFG
                     RAGLHSVLEPAAWGLPVAFGPQWRESRDAADLLEVRGGRALTARGAAAVGEMVGIWCE
                     WIEREEERRAAGGRSRALVERGRGAAARSAELLAELTSSPRPRTSPSGAR"
     gene            complement(7006..7368)
                     /locus_tag="VF061_08120"
     CDS             complement(7006..7368)
                     /locus_tag="VF061_08120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669507.1"
                     /translation="MRLPRRALPALLAILLLAGCAHTFDATTLGVPVTVASPAGQPAQ
                     GDRFRVGGKSVFGFWGLLKFREPSLRKALAAQLGGGTGVADLRIRVRSRWSDVLITGL
                     TLGLIVPRSVTFEGVVTK"
     gene            complement(7365..>8058)
                     /locus_tag="VF061_08125"
     CDS             complement(7365..>8058)
                     /locus_tag="VF061_08125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669508.1"
                     /translation="HAGGSAMNQGVLGAIALAAALAGVAPSAVAQVRGIPVYNAGVPR
                     GIGIYGDVGFPNDEAGGGTGYGVTGRAGFGLFGAAAILSSYNPDGPGDSDLSVGATLN
                     YRVFGGPLVPLSVTLQGGIGYAKPEDGTLPDLDVTQLRFPIGVGFALTIPNPALAIKP
                     WLAPRIDIVRTSVENADAETDSEFGLSGGIELNTLGGFGVHATYDAIFADGGTPGVFG
                     VGAHYTFRVPGL"
BASE COUNT         1143 a         2959 c         2828 g         1128 t
ORIGIN      
        1 gggtatgaac ggctctggcc ggccgacctc cacgtgatcg gcaaagggat cacccggttt
       61 cactgtgtca tctggcctgc catgctgctc gcggccggcc tcccgcttcc gacgcgtgtc
      121 tgggcccatg gctacgtgca gtgggaaggc accaagatgt cgaagaccgc cggcacggcg
      181 gtcaccctgg gcgacgcgat cgagcgccac ggatccgatg ccctgcgcta cttcctcctc
      241 cgcgaggtcg ggttcgaggc cgacggcaac ttcagctggg atcggttcga cgagcggtac
      301 acggcagacc tcgccgacgg actgggcaat ctcgtgtcac gctcgctggc catggtcgcg
      361 aagtaccggg agggcgtggt accccctgtc acggccgaca ccccgctcga cgaggccgga
      421 cggaaggccg tggcggccta cgggcaggcc atggaccggt gcgacctgcg gggcggcgcg
      481 gaggcggcct gggagctggt cgcgaccgcg aacctgtaca tccagcaggt ggcgccctgg
      541 accctggcga aggagggacg ccaagcggag ctcgaggtgg cgctcgccgc gctcgcgcgg
      601 gcgctgtatc ggctggcggt gctcgccgag ccgttcatgc ccgggaaggc cgcgaccatc
      661 cgggcgtccc tgggcgtgga agaggcccgg gtggactggg agagcctcga agcgcccccg
      721 gtcggaggcc tcgagacccg ccgcccggag gtcctgtttc ccaagccggc gagtgtgtag
      781 gagttgcccg ctcgtgcagc aaaactattt gacagtcaaa gagttatgcg actgactgcg
      841 ctcttgacat ccggttcggc gaggggcagt ttgctctgtt agcgtgactt cggtcacgcc
      901 cgattgagcc gaaacacggc atattgcatt tggttcgaac tcggcgtcgc gtcacctggc
      961 gtcgatcacc ccctgagtcg aggtaacgcc gaggatggcc aaacgccgct ggaccgtcgt
     1021 gttcgtccct cacgattcgg agccctccag gatcatggag gtgtcttacc ggctcgtgaa
     1081 gacggccatc ggcggtgccg tgctggcggt cggggcggcc ctggtcttcg gctacgtgac
     1141 cgtctcccga accgtggacc tgtcgcagtc ggcccggctc gcgcaggaga atgcacgcct
     1201 cgagcagcag ctcgacgagc tgaacggccg gctcatcacc ctcgccgata ccctctcccg
     1261 catctcccag cgcgacgccc gcatccgcgt cctcgccaac ctcgagccga tcgatccgca
     1321 ggtgcaggcc gccggcatcg gcggtccgac cgtgggcgag gtcgagggcg aggcgggcac
     1381 cgcgatgcgc cgcagcagcg agatccgggt ggacctgaac gccctgatcc gccgcgccaa
     1441 cctgctggcc tcctcgttca aggaagcgac ggacagcctg gcggtgcact cggcccggct
     1501 ggcggccacg ccctccatca tgccgacgca gggctggctc tccagcgcgt tctcttccat
     1561 gcgctcgcac ccgatcctgc acgtggcccg tccccacgag ggcatcgacg tgacggcgcc
     1621 gatgggcacc ccgatcgagg cccccgccgg cggcactatc cgggacgcgg gctgggaggc
     1681 gggctacggc aacaccatcg tgatcgacca cggcttcggc acggtcacca agttcgccca
     1741 cgcatcgaag atcctggtgc gggagggtca gcgggtttcc cgcggccagc ggatcgcgct
     1801 ggtcggtaac accggcctcg ccaccggccc gcatctccac tacgaggtgc acgtcaatgg
     1861 ccgcccggtg gatccgctgc gctacgtgtt gccggagcac gtggtgaccg attagcgacg
     1921 gcgtgtcacc ctgagcagcg cgaagggggc catgactgcc atggccccct tcactgcgtt
     1981 cagggttgac aggtgaggat cagaactgga ctttcggcgc cgtctccgtg cccggcgcgg
     2041 cctcgaaata ctctctcgcc ccctgcccga agatcttggc cgtcaggttg tagggaaagc
     2101 ggcgtatgta ggcgttgtac tcgccgacgg cggtgttgta gtcctgccgg gccacggaga
     2161 tccggttctc ggtgccctcg agttggtcct gcagcgcgcg gaagctctcg ctggaccgga
     2221 gctcggggta gttctccacg atcgcgagca gccggccgat gccctgggtc agctccgcgt
     2281 tcgccgccgc catctgtccc acgtcgccgg actgcaccgc gcccgacagg cgggcccgcg
     2341 attcggcgat gctgatgaac acggtggatt cctgcttcgc cacgcccttc accgtctcga
     2401 ccagattggg gaccagatcc gcccggcgct ggagctgggt ctcgatctgc cccttggcct
     2461 ggttgacccg ttcgtccatc gtctggatgg tgttgtaccc gcacccgctc gtcagcagcg
     2521 cgagtgcgag gagtgtcgac gggaccgcca cagagcgcgt catcgctgat ctccgagctg
     2581 aagttgatcg aggaaggcgg ccgcgcgggc caccgcatcg aggtagccct cgaactcgcc
     2641 gggcgagcaa cgccagcctc gctccgcgcg gtgccggacc acgttgagca gcggctcccc
     2701 gtcgattccc atcgccgcgg cggctgccgc cgcgacctgt cccggctccg agggcaccgg
     2761 gcgacccagc aggaccagca gtgcgcgcag cagcaccagg aaggttcccg agctccgctc
     2821 cgccaggccg cccagggcgg cggcatcgcc cgcggcggcc acgtacccct gccgcaggcg
     2881 cagcagcttg ccccggaact cgcgctccag ggcatgccgc aagtcggccg gcgccacgtg
     2941 gagaccggcc acggggtcgg ggccccgcag cacctggtag ccggcgcgca tgtcggtgat
     3001 ctcgatggga aacacgtcgg tcgcacgggc ccactcggag cgcaggatca ccaggggcgg
     3061 ctcgtagccc gatttgcgcc acccggcgaa ggccgcgccg agccccgaca gtcgcgcagg
     3121 cgagagatcg tcggtgatga gcatgaggtt gagatcggac cggccgggga cgaagtcgct
     3181 ccgggcggcg gagccgaaca gcacggcgct gtagccgccg ccgaggacct catccacctg
     3241 actcaggaag gggccgacga cccgatccac cgcatcgcgc atcagaatct ccccccggcg
     3301 ccgccgccgc tgaagccgcc tccgcccccg aacccaccga acccaccacc gccgaacccg
     3361 ccaccgcccc agcccccgcc gccgccccaa cctccaccaa tccagggccc accccaaaat
     3421 acactgcgcc ggcggcgcct ccggcgtccg ccgaacgcgc cggagagcat caggaagagg
     3481 atgaagagga ggatcggcag cgcgcccagt gaccggccgc ccccaccgcg cggctgggat
     3541 accggccgcg cgttggtcag cgccgtgtcg ctcaccccgt agccgcgcgc gatgagccct
     3601 gccagcgcct cgacgccgtc ctggagcgcg ccgctgtact cctcccgggc gagccgctgg
     3661 cccatgaggt cgcggacgcg gccggccgcc acatcggtga cgatgccttc gaggccctgg
     3721 cccacctcca cccgcacccg gccggtgccg ggttggccgc cctgcctcgg cacgaccagc
     3781 acgaccacgc cggcgttccg ccgctcgtcg ccgatctccg cgaccgcgcc cacgccccag
     3841 gcccgcccga tctcccgggc gacatccgcc tcctcgcgct ccccgatggt gggcagcgtg
     3901 acgaccgcga tctcggctcc ggtggctgcc cgcagccgct ccgccaggct ggtgatccgc
     3961 tcctctgccg cctggtccac gacgccggcc gcgtcggtga cgtaaccggt gggctgggcc
     4021 ggaaacaggc tcctgatgcc ggagtcctgg gccgcgagag cgccggcgat gagttgaagc
     4081 cccgtcagga gcgcgatagc tttgactcgt gtcccgctca atagcactcc cggtgctggc
     4141 cgcgtcactc gtcgccctcg ccgggctgac cgcctgcgag cggccccgcg aagttgccgt
     4201 ccgcgtctcc atccccggtc cggactcggt ggagactccg gtgaccggcg tcggactcgt
     4261 cgccctgccc tatgaccgcg acagcgtcct ggccgccctc gagaccgagg ccgcgacacc
     4321 gcatcccgac actaccgcgc tcgacagcct ctttcgcgcc ttccaggcgc ccttcgcgcg
     4381 ctacacccag gcggtccagc ggaccgagcg gctccgcgac acgctggagc agctccgcag
     4441 cggcctcgac agcatgccga gggatgggcc cgagtaccgc gagcgatacg ccggattcac
     4501 ccggctcgac gactccctcg ccgcggcgag gaaggccgcc gagcgcgcgc ggggggagct
     4561 cgaccgcgcg cgcgccgagt tcgccgagcg cggcgatccg ctccgcgccc ggatccggca
     4621 ttgggaagat agcacctacc gtggatacga cagcatcacg cggaacctcg ccgcgcgccg
     4681 ccgacaggat ccccgcaccg acaccaccgg cgcggacggg tgggcgcagt tcacccttcc
     4741 gccgggcgcg tggtggatct acggccgctc gtgggacgcg accgacccga acgccgagtg
     4801 gtactggaac ctgcccgtga ccgacgacac catcctcctc tccagccgga ccggccggca
     4861 gcggcggagg tactgatgac ccgacgcgtc gccgcgctcg ccctcggcgc gctgctcgcc
     4921 accggcggcg acctcgccgc ccagcagcaa tccaccaccg ccgcggccac ccgcgcgaag
     4981 ggctcgccct cggcaccggt cacggtgtac gagatgtcgg acttccagtg tccctactgt
     5041 cggcgcttcg cgctggagac gttccgggcg atcgagcagg agtacatctc gccggggaag
     5101 gtgcggtggg tcttcgtcaa ctttccgctc acgagcattc acgccaatgc ggtggccgcg
     5161 gcggccaccg cggtctgcgc ggcgcggcag ggggccttct ggccgatgca cgacctgctg
     5221 taccagtacc aggagacttg ggcgccgctc aaggagcccg ggccgttctt cctctctctg
     5281 gccgactcgg cggggatctc gaagccgaag ctcctggaat gcgtgaaggc gccggccacc
     5341 gaggcggaga tccgctacga agccgaaggc gccgagcgcg cgggcgccag cagtacgccc
     5401 acgttctaca tcgagggcgg gctcctcgcg ggggcgcacc cgctgccgct gttccgccag
     5461 gtactcgact ccatcctcgc caccaaggcc gccggcacac gccgggacca gtgaccccaa
     5521 aagaaagggg ccgcctgtgg cggccccccc aggtaagcgt cgcctgggct cgtcgtgcag
     5581 ctaagttacc agccgcaggc gacccttgac tctgtagaca atggatcacc tcctcggtag
     5641 caggtgggac atgaatgcgt gccgaaacgt agccccctgc cccgcgggcg ggcaacggtt
     5701 cggcgggcgg tagagtgggc gacatgggcg cgacgccccc ggtgtaccgc gcggcggtcc
     5761 ggctggcgag cggcctggcc ccggccctcg ccctcctgag cccgaagctc gccgcgggtc
     5821 accggggacg tcacggatcc gccgagcgcc tggccgcctg gggctcccgc catcgcgacc
     5881 tccggcggcc gctgatctgg ctgcatgcct cgtcggtagg cgagggattg caggcggaga
     5941 gcgtgcttct cgagctccgc cgccgccgtc ccggggcgca gtacgtctac acccacttca
     6001 gtccctccgc ggagtccctg gccggccggc tgcccgtgga tgccgcggac tatctcccct
     6061 acgacctgcc gcggaccgtc gagagcctgc tccaggctct cgcgcccgat ctcctcgtct
     6121 tcgcgaagct ggacctttgg ccggagctgg cggtgcgggc ggccgcgcac gggacccggg
     6181 tggccatggt cgccgcgacg gtgagcccgg gcagcggccg gctccgctgg ccggtccggt
     6241 cgctgctccg cccggggtat gcggcggtct gcgcggcggc cgccgtggcg gacggcgatg
     6301 ccgaccggct cgcccgtctc ggggtttctc ccgatcggat ccgggtcctg ggcgacccgc
     6361 gctgcgacag cgtggtggac cggatcgccg agatcgcgcc ggacgagccg ctgctcggtt
     6421 ttggccgcgg cgcccccacg ctggtcgcgg gctccacctg gccgggtgac gagtccgtgc
     6481 tgctccggtc cttcgcccgc gtcctcccga gccatcccgc tgctcggctg atcctggtgc
     6541 cgcacgagcc gaccgagccg cacctgctgg aggcggagcg cgcagccgcc ggcctggggc
     6601 tccccgtccc cgtccgcctg agccgggcgc gggaggcggt gccgctgctc ctggtggacc
     6661 gggtgggcgt gctggcggcg ctctacgggg ccgggacgat ggcgtatgtc ggcggtggct
     6721 tcggccgggc cgggctgcac tcggtgctcg agcccgccgc gtggggcctg ccggtggcct
     6781 tcggcccgca gtggcgggag agccgcgacg ccgccgacct gctcgaggtc cgcggggggc
     6841 gagcgctcac cgcccgcggc gccgcggccg tcggggagat ggtcggaatc tggtgcgagt
     6901 ggatcgagcg ggaggaggag cggcgcgcgg cgggaggacg atcgagggcc ctggtggagc
     6961 ggggccgggg cgcggcggcg cgctccgcgg agctgctcgc ggagcttact tcgtcaccac
     7021 gccctcgaac gtcaccgagc ggggcacgat gagccccagg gtcagtccgg tgatcagcac
     7081 gtcgctccag cggctccgca cccggattcg cagatcggcc acgccggttc cgccgccgag
     7141 ctgagcggcc agcgccttcc gaagggacgg ctcccggaac ttcagcagcc cccagaagcc
     7201 gaagacggac ttgccaccga cacgaaagcg gtcgccctgg gcgggctggc ccgccggcga
     7261 ggcgaccgtg accggcacgc cgagcgtggt ggcgtcgaag gtgtgggcgc agccggccag
     7321 gagaaggatc gcgagcagcg cgggcagcgc ccggcgcggc agtctcacaa accggggacc
     7381 ctgaaggtgt agtgcgcccc gaccccgaag acgcccggcg tcccgccgtc cgcgaagatc
     7441 gcatcgtagg tggcgtgcac gccgaatccg cccagcgtgt tgagctcgat gccgccgctc
     7501 aggccgaact cgctgtcggt ctcggcatcg gcattctcca ccgacgtgcg aacgatgtcg
     7561 atgcgcggcg ccagccacgg cttgatggcc agggcgggat tggggatcgt gagcgcgaag
     7621 ccgacgccga tcgggaagcg gagctgggtg acatcgagat ccggcagggt gccgtcttcc
     7681 ggcttggcgt agccgattcc gccctggagg gtgaccgaga gcggcaccag ggggccaccg
     7741 aagacccggt agttgagggt ggcgccgacc gacaggtcgg agtcgccggg gccgtcgggg
     7801 ttgtagctgg agaggatggc ggcggccccg aagaggccga accccgcccg gcccgtcacc
     7861 ccatagccgg tcccgccgcc ggcctcgtcg ttgggaaacc ccacgtcgcc gtagatcccg
     7921 atgccccggg gcacgcccgc gttgtagacc gggatgccgc gcacctgggc cacggcggaa
     7981 ggcgcgacgc ccgcgagggc ggcggccagc gcgatggccc caagcactcc ctggttcatg
     8041 gcggaacctc cggcgtgg
//
LOCUS       DASUYN010000415         2969 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_127419, whole genome shotgun sequence.
ACCESSION   DASUYN010000415 DASUYN010000000
VERSION     DASUYN010000415.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2969)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2969)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2969
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127419"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            206..1099
                     /locus_tag="VF061_08130"
     CDS             206..1099
                     /locus_tag="VF061_08130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669509.1"
                     /translation="MVSSAVRRSVAVVAATLLLAACDDLLPRRQSPPVAAAADSAPAT
                     KRPRRQPPARDTQPEATALEAEAAFGQIRQSLRRLVAAEQGFYAENGTYSQDLQRVGF
                     RPAGASQVEFVSVTKQGWAARGTHPALPGSDCVTYAGAATTPPATRRFARTGSEGVIV
                     CDSRAVPAPARPAPAAPAPSAGAAPVAADTANALDAVNPTVQMRVDLRKLGEAQAAYY
                     GTQGLYSRDVERLQLQFAWQRGVEVKLLHADQRSWSARATHTARPGSSCVVWYGVPPT
                     RPATQAQRKVPERPGVPVCDD"
     gene            complement(1109..1558)
                     /locus_tag="VF061_08135"
     CDS             complement(1109..1558)
                     /locus_tag="VF061_08135"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon monoxide dehydrogenase subunit G"
                     /protein_id="HEX6669510.1"
                     /translation="MKLDFSGASEITAPRAKVWERLMDPDFVAASAPGVEAVERVDPN
                     HFTVISGLGVGAIRVRFQLEVELSDVVAPERLRMSARGRAPGSTVDVVSQVRLQPMTN
                     GRTQLSWAATSTIGGTVASLGARLLESTARRLTEEFWTDFARRAGAD"
     gene            1802..1874
                     /locus_tag="VF061_08140"
     tRNA            1802..1874
                     /locus_tag="VF061_08140"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1835..1837,aa:Asn,seq:gtt)
     gene            complement(1974..>2969)
                     /locus_tag="VF061_08145"
     CDS             complement(1974..>2969)
                     /locus_tag="VF061_08145"
                     /inference="COORDINATES: protein motif:HMM:NF013442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669511.1"
                     /translation="ELLSRGSGPYFYLPKLESHLEARLWNDVFTMAEDELAIPRGSVR
                     ATVLIETILAAFEMEEILYELREHSIGLNAGRWDYIFSMIKKFRTRPDFVLADRALVT
                     MTTHFMRSYSLLAIKTCHARDAHAIGGMAAFIPSRRDAEVNALALAKVREDKGREAGD
                     GYDGAWVAHPDLVPVVQEVFDAVLGDRPHQKDRRRDEVRVGARELLDVRVPGARITAA
                     GLRGDVSVALQYLEAWLRGSGAVAINNMMEDTATAEIARAQLWQWVRHGVRTEEGEPV
                     TLERVRALLEEETARLQGAAVGEHRLAEAAALLDALVSAREFPEFLTLGAYERLE"
BASE COUNT          431 a         1069 c         1026 g          443 t
ORIGIN      
        1 ggaccgcgat gttgatggaa accgcgggct ggacccagcc accggtgggc gtccgcaccc
       61 ggcagccggt cacgcgggag atcgtggccg aggacctcga tctcccggtg cggggatgag
      121 gcgggctgtg tccggccgac gcccgatggc ggaacccggg ttccagaagt aggatagaaa
      181 ttcacccccc tgagcgatcc cactcatggt ctcatccgcc gttcgccgct ctgtcgcggt
      241 ggttgccgcg acgctcctcc tcgccgcctg tgacgatctc ctgccccgcc ggcaatcccc
      301 cccggtggct gcggcggcgg attcggctcc cgcaacgaag cggcccaggc ggcagccgcc
      361 cgcccgggac acccagccgg aagccaccgc cctcgaggcg gaggcggcct tcgggcagat
      421 ccggcagagc ctgcggcgcc tggtggcggc cgagcagggc ttctacgccg agaacggcac
      481 gtacagccag gacctccagc gggtgggttt tcgtccggcc ggcgcgagcc aggtggagtt
      541 cgtctcggtc accaagcagg gctgggcggc gcggggcacc catccggcgt tgccggggag
      601 cgactgcgtc acctatgcgg gcgccgcaac tacccctcct gcgacgcgcc gcttcgcccg
      661 gaccggctcc gagggtgtga tcgtgtgcga cagccgagcc gtgcccgccc ccgcgcgccc
      721 cgcgcctgct gcgcctgctc cgagcgccgg ggcggcgccg gtcgcggcgg acacggccaa
      781 cgcgctggac gcggtgaatc ccaccgtgca gatgcgggtg gatctcagga agctcggcga
      841 ggcccaggcc gcctactacg gcacccaggg cctgtactcc cgcgatgtgg agcggctcca
      901 gctgcagttt gcgtggcagc gcggagtcga ggtcaagctg ctccatgccg accagcgctc
      961 ctggtccgcc cgggcgacgc acaccgcccg tccgggcagc agttgcgtcg tctggtacgg
     1021 agtgcccccc acccgaccgg cgacccaggc ccagcggaag gtgccggagc gccccggtgt
     1081 gccggtgtgc gacgactagt ccggcgactc aatcggcgcc ggcgcgccgg gcgaaatcgg
     1141 tccagaactc ctcggtaagc cgtcgggcgg tgctctccag aagtcgcgcg ccgaggctcg
     1201 ccacggtgcc gccgatggtg ctggtcgcgg cccagctgag ctgagtccgg ccgttggtca
     1261 tcggctgcag gcggacctgg gatacgacgt ccacggtcga gcccggggcc cgaccgcgcg
     1321 cgctcatcct gagccgctcg ggcgccacca cgtcggacag ctcgacctcg agctggaacc
     1381 tcacccggat tgcgccaacg cccagcccgc tgatcaccgt gaagtggttg gggtccaccc
     1441 tctcgaccgc ttccactccc ggggcggagg ccgcgacgaa atcgggatcc atgagtcgct
     1501 cccagacctt cgcacgcggc gcggtgatct cggaggcgcc ggagaagtcc agcttcatgt
     1561 gacccgcccc ggcgggggcg agctgccgga catcgcgtgg tccgtgggac gggtcattct
     1621 ggcggggctc cttgcgaacg acttggcggg acgcgaccag ggcggaaact ggaagcgacg
     1681 gcgtggaatt tccgacaact ttgttcccgc cacgagagcg gtcaagactc cggcccgctt
     1741 gggcttgacc acttaccgct ggggcgtgta aagtgactgt cccgcgttac cacgggaacc
     1801 ttggggtgta gctcaatcgg cagagcgccc ggctgttaac cgggaggttg ctggttcgac
     1861 cccagccgcc ccagctgcga agcctccgac gaaaccggaa acgtggaaga gtgaaacggg
     1921 agcagcccgc gcccgtttca ctcttcgctt ttcaccgtgc cctgcgttcg ccgctactcc
     1981 agcctttcgt aggcgccgag ggtcaggaac tcggggaact cccgcgcgct caccagcgcg
     2041 tccagcagcg cggccgcctc ggccagccga tgctcaccca ccgcggcccc ctgcagtcgc
     2101 gcggtttcct cctccagcag cgcccgcacg cgctccaggg tcaccggttc cccctcttcg
     2161 gtgcggaccc catgcctgac ccactgccag agctgggctc gcgcgatctc ggccgtcgcg
     2221 gtgtcctcca tcatgttgtt gatggcgacc gcaccggagc cgcggagcca ggcctccaga
     2281 tactggagcg cgaccgagac gtcgccgcgg agtccggcgg cggtgattcg ggcgccgggc
     2341 acgcgcacgt cgagcagctc ccgcgcgccc acccgcactt cgtcgcggcg gcggtccttc
     2401 tggtgcggcc gatcgccgag cacggcgtcg aagacctcct gcaccaccgg gaccagatcc
     2461 gggtgggcga cccaggcgcc gtcgtagccg tcgcccgcct cccggccctt gtcctcccgc
     2521 accttcgcca gcgccagcgc attgacttcg gcgtcgcgcc ggctggggat gaacgccgcc
     2581 atcccgccga tggcgtgggc gtcgcgcgcg tggcacgtct tgatggccag cagcgagtac
     2641 gagcgcatga agtgggtcgt catggtgacc agggcccggt cggccaggac gaagtcgggc
     2701 cgggtgcgga acttcttgat catgctgaag atgtagtccc agcggcccgc gttgaggccg
     2761 atgctgtgct cacgcagctc gtagaggatc tcctccatct cgaaggcggc caggatcgtc
     2821 tcgatcagca cggtagcgcg gacactgccg cgcggaatgg ccagctcatc ctcggccatc
     2881 gtgaagacgt cgttccagag gcgcgcctcc aggtggctct ccagcttggg cagatagaag
     2941 taagggccgc tgccgcggga gagcagctc
//
LOCUS       DASUYN010000416        12083 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_569867, whole genome shotgun sequence.
ACCESSION   DASUYN010000416 DASUYN010000000
VERSION     DASUYN010000416.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 12083)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12083)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12083
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_569867"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..508)
                     /locus_tag="VF061_08150"
     CDS             complement(<1..508)
                     /locus_tag="VF061_08150"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX6669512.1"
                     /translation="MTRQPLPVTSSAPLRPIARESTGPEEALPDPAEGLALVKPGVRA
                     QAGYTLRSPAARRKLNQNECPHDLPPELKRAVLDRAGSAPWQRYPEFVPARLVERLAG
                     HYGWVPEGVVVGNGSNELIQATLSVVLAEGDPVIVPCPAQQGFKLDPADLERAITRRT
                     KWIILNSPS"
     gene            complement(505..2751)
                     /locus_tag="VF061_08155"
     CDS             complement(505..2751)
                     /locus_tag="VF061_08155"
                     /inference="COORDINATES: protein motif:HMM:NF012652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II/IV secretion system protein"
                     /protein_id="HEX6669513.1"
                     /translation="MQFLDEWLVPTVEPLLAGDALAALRLEVAPAPVSLWETAVQRRL
                     VSDDQVLGAIATRFRLPVADLSRVDSRVTGDIPEQLARRFTVVPLGQTDSYLEVATAN
                     PFDIDAEKMLAFATGREVRMLLASPGKLRAKLDEIYRSGEEVVSRLLAGIDEDTEVKE
                     LTEDEDDYAAASAEEASQRPIIRLVDMMLADGVVSRASDIHVEPIEGGVVVRYRIDGV
                     LRQVMKVPRNAGIPLISRIKIMSGLDIADRLRPQDGRARVSVNGEPVDLRVSTLPASL
                     GEKVVIRILSQRTTVLNLESLGLHQDEQEAIKGLLTHKEGIILVTGPTGSGKTTTLYS
                     AIRLIQSEGVNIVTVEDPVEYRLGENIVQVQVHDKAGLTFASALRSILRQDPDVVLVG
                     EIRDQETSQIALQASLTGHLVLSTLHTNDAPNAVTRLVDMGMEPYKIASALRGVVAQR
                     LMRRLCQACFEPREEPVPERLTRYVPPDAKLLRAVGCAECAMTGYRGRFSIMEVLSMN
                     SDLERRIGQGATADVIAEAARASGMRSLFESGLRHVLAGDSTLEELLRVTDVPREDRA
                     ARPPQPRPTGPAAAPPRVAAAPPPPKPESSLSLDFADALELVDDQAEVGRAAAGVRGA
                     GTCVLLVEDEDQLRRVMKDLLEREGYTVAEARDGVQALDQVDRFAPDVIILDLNLPGL
                     DGYSVLSQLRSRPATRSIPVMVLTAKGDEDNEVRVFELGADDFITKPFRAKALSARLE
                     AVLGRHRA"
     gene            complement(2814..4856)
                     /locus_tag="VF061_08160"
     CDS             complement(2814..4856)
                     /locus_tag="VF061_08160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669514.1"
                     /translation="MRGVRHLGTIGALLTFAPPLTAQSWDAPEALALVRRAIDQRAAV
                     EADSMLRSYRTRAHGFVFFLAQVGEGLAEPPRLIKADELDVEVYWQAPNHSKQVVLGW
                     RDGTFLPTDIEYHRDHLGIVTNNFGDVIRIGEGDEVRDAIHPLARAGPLLYRYALGDS
                     LTIRTGSGEVTVHEVQVRPRSFARPLVVGTMFVDTESAELVRFRFSFTPAAYLDRQLE
                     DITIALESARFEGRWWLPYRQEIEIRRRASYFDFPARGIIRGRWEIADYDLNVGMPPS
                     VVAGPAIGGLVRPQPGDSGWAMPLSEAIADVAAPINAQDMEALRVQVERIAGSRALGG
                     LPSSRLATGSLSDLARVNRVQGLALGFGGVVGIGGRVRLRPQVGYGTSDDRLTGGLTL
                     LAGAGATQVFAGAERRIGDFADLPVISPALNSLLAQEAGDDYGDYVLVNAAAAGLRHR
                     LGGRTSVELRLAVEESRSVGVASSPANGTYRPNPPLGAGTFRIARAAVERASGGLAVE
                     RDFQGRLALEGGEGDGEYLRATADGRWLTGGGPGRLLTRLHLGLGTDRLPAYRSFVLG
                     GRGTLLGEPFRAYGGRAAALAHVEWRLEVPVPAVPLGSFASTGRHLTLAPFLAAGWAE
                     RPLAELPWGDTDGVRPVAGVAAEWLMGLLRFEVGVGLRSGDIGVSVDVNRDWWGIL"
     gene            5003..5470
                     /locus_tag="VF061_08165"
     CDS             5003..5470
                     /locus_tag="VF061_08165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669515.1"
                     /translation="MPLSEAIVLESSGPQPPDTAVTFTAGEARVIVLRHGPPEYIVFA
                     ELSFPAAAFDTRGREVRVEVRPRPGVYGVDVATSLAIRDSATITFKYPRYFAAPGRAR
                     AVYGSDLAYERALAIGRILPNGLLALLGSTRPFHDMLRAPLPAAGTYFVAAPQ"
     gene            5467..6990
                     /locus_tag="VF061_08170"
     CDS             5467..6990
                     /locus_tag="VF061_08170"
                     /inference="COORDINATES: protein motif:HMM:NF012640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate-binding protein"
                     /protein_id="HEX6669516.1"
                     /translation="MTQGFDRFAGQARLGGGIVPVTREVVLDGDTPVTAFAKLHRGPW
                     GFLLESLEGGERWARYTFLATEPREVVRYRGRECARWAPGEEWRVVETDLAPLEHLGR
                     TMRRHPPVVVPGLPRFTGGAVGFWSYDVVRTIESLPAAPPDDRDLPDALVMVADTLLV
                     LDNLFNRATVIASVEVPPGAAPADLRRLHQEAEARIDRWLARLAAPGTVRPLAIETVP
                     PLPPATSPYPDDRFQTDVRRIKEYIAAGDTFQTVLSRRIDVAAPDPFLSYRYLRALNP
                     APYLYYLHCDDIHLIGSSPEILVRVEDGEVTVRPIAGTRPRGSDTAQDAALADELAAD
                     PKERAEHLMLVDLGRNDVGRVAEFGSVRLTAFMTIERYSHVMHLVSEVRGRLRAELDA
                     VAALAACFPAGTVSGAPKVRAMQIIDELEPVRRGPYAGAVGYVGWGARTLDTAITIRT
                     CVIRGDRAWVQAGAGIVADSDPAGEWRETEAKARAVLLALALAGAVQAGTEHPPMSP"
     gene            7040..8629
                     /locus_tag="VF061_08175"
     CDS             7040..8629
                     /locus_tag="VF061_08175"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX6669517.1"
                     /translation="MPAFRLVSVSGDQSFELPPGRSLVVGRGVATDIAIYDPTISRRH
                     AELTAGADGVEVRDLGSSNGTCINGSRVTTGRLTANDSITFGKVTYRVAATAPVHPAP
                     EPAEPGDTIVRKLMVSAGSSAGITSRDGPLSRGQLRVAAATAEERQAKKLSMLLEVAQ
                     KLTGELELDRLLRAVVDMTFQVMEVDRVTILLRNEATGELVPTISKSRLGDTQVQPVP
                     RSIVDKVVEERVAVVSHNAPADSRFKGRSIVTQSVRSAMCSPLLDAKDQILGLLYVDN
                     LSAPGTFSDEDLQFLVAFSGLAALGIKNSRFAEQIRREALVRSNFERYFAPNVAAAIA
                     RQDGDIRLGGERRPITVLFSDIRGFTAIAESMGPDAVAKLLSEYFSEMVEVIFEHGGT
                     LDKFIGDAVMALWGAPIAHSDDPDRALQAAVAMQRTIEELNRRWVAEGRPEIGVGIGI
                     SHGEVFAGNIGSHRRLEYTVLGDAVNVAARLCAEAGPGEILVSEPLLRMVKQPVEYEY
                     LPELGLKGKSQVVQVYRLKQT"
     gene            complement(8626..9234)
                     /locus_tag="VF061_08180"
     CDS             complement(8626..9234)
                     /locus_tag="VF061_08180"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014591.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Maf family protein"
                     /protein_id="HEX6669518.1"
                     /translation="MTREPLTLASGSPRRRQLLEMLGIPVRVLPSNVPEVRRPAETPL
                     DYVERLAREKALGVSGRLVLGADTTVIVRDEVLEKPVDEADALRMLGKLQGRTHQVVT
                     SVALVQGDRLHQATDVTNVSFRRMTEDFLRAYVATGEPMDKAGAYGIQGYGAALVERI
                     EGDFFSVMGLPVRLVLRLMEEAGEGYEFGAGTAPGRRHPAPA"
     gene            complement(9231..9674)
                     /gene="dtd"
                     /locus_tag="VF061_08185"
     CDS             complement(9231..9674)
                     /gene="dtd"
                     /locus_tag="VF061_08185"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: protein motif:HMM:TIGR00256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-aminoacyl-tRNA deacylase"
                     /protein_id="HEX6669519.1"
                     /translation="MRVVLQRVSRASVTIDGRTAGAVGRGLCLLVGLTHTDTEATVDW
                     MAEKVAGLRLFSDAEGKMNLGLDQVDGAVLVVSQFTLYGDAAKGRRPSFVDAARPEQA
                     IPLYERFVAALRSRGLEVATGEFGAQMLVEIHNDGPVTLILERNA"
     gene            9721..10551
                     /locus_tag="VF061_08190"
     CDS             9721..10551
                     /locus_tag="VF061_08190"
                     /inference="COORDINATES: protein motif:HMM:NF024874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX6669520.1"
                     /translation="MVKISAIPAAPQRPEPLTWPDDRLTAAWLGHATVLLNFYGVRIL
                     TDPVLESRVGIGRGAAKLGPRRLVRPALRTRELPPLDLVLLSHAHMDHTDLGTLRSLR
                     RDLPVVVQRGNRDLVRRFRRVEELDWGESVEVAGTCVESVEVRHWGARMVTDRHRGYG
                     GYLLTRNGTSVLFAGDTAYTDAFDRLGARTRVELAILPIGAYDPWIANHASPEQAWRM
                     FRGLGARYLLPVHHSTFRLSREPVEEPLERLRAAAGSESWRIVTPEIGSTWWTPGTGG
                     "
     gene            10670..11287
                     /locus_tag="VF061_08195"
     CDS             10670..11287
                     /locus_tag="VF061_08195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEX6669521.1"
                     /translation="MLALVRGYARGGGLAVVYPLTRAISPLAVALLARVMVGERLSAG
                     GYAGVAMVSAGVGLFATRGGLRGSAAVGWGLTGGVLTAAYTVCDAQGARLSPSVAGYG
                     ATVALLNALVLGSVHHLRVGSIRSVLASHPGIATLGAGAAAISYLTILWVYTRTQIAI
                     GAALRDTSIVFAALIATVVLRERMTPARVGAVALVAAGAVTLRLA"
     gene            complement(11303..>12083)
                     /locus_tag="VF061_08200"
     CDS             complement(11303..>12083)
                     /locus_tag="VF061_08200"
                     /inference="COORDINATES: protein motif:HMM:NF017591.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alkaline phosphatase PhoX"
                     /protein_id="HEX6669522.1"
                     /translation="SGDGQAIPIPLRDMGRFVHEAVAVDRATGIVYETEDRTPTAGFY
                     RFLPRERGRLAAGGRLQMLAIEGRPNYDTGSGQTVGKRLPVRWVEIAEPDPGPGTGPT
                     AIFDQGYARGGARFARLEGCWYGDDSIYFHATNGGDAQVGQVWRYQPRGPDRGDLLLV
                     FESPSRDVLDYPDNITVSPRGGIVICEDGEGEQYLRGLTPDGAIFDLAKNILNPTEFA
                     GACFSPDGRVLFVNIMGSTQDLGPEAGRTLAIRGPWDRGAL"
BASE COUNT         1639 a         4432 c         4306 g         1706 t
ORIGIN      
        1 tggacggcga gttgaggatg atccacttgg tgcgccgggt gatcgcccgc tccaggtcgg
       61 ccgggtcgag cttgaagccc tgctgcgccg ggcagggcac gatcaccggg tcgccctcgg
      121 ccagcaccac cgagagcgtg gcctggatga gctcgttgga gccgttgccg accaccacgc
      181 cctcgggcac ccagccgtag tgccccgcga ggcgctccac cagccgcgcg ggcacgaact
      241 cggggtaccg ctgccatggg gcggagccgg cgcggtcgag cacggcccgc ttcagctcgg
      301 gagggaggtc gtgggggcac tcgttctggt tgagcttgcg ccgcgcggcg ggcgagcgaa
      361 gcgtgtagcc cgcctgggcc cgcacgccgg gcttcaccag cgccagccct tcggccgggt
      421 cgggaagcgc ctcctccggg ccggtggatt cgcgagcgat cggtcggagg ggggcggagg
      481 aagtgacggg gagcggctgc cgggtcaagc gcggtggcgg cccaggaccg cctcgagccg
      541 agccgacagg gccttggccc ggaacggctt ggtgatgaag tcgtcggcgc ccagctcgaa
      601 cacccgtacc tcgttgtcct cgtcgccctt ggcggtgagc accatgacgg ggatcgagcg
      661 ggtggccggc cgcgagcgga gctggctgag cacactgtag ccgtcgagcc ccgggaggtt
      721 gaggtccagg atgatgacgt cgggcgcgaa gcgatccacc tgatccagcg cctgcacgcc
      781 gtcgcgcgct tcggcgacgg tgtagccctc ccgctccagg aggtctttca tgacccgacg
      841 cagctggtcc tcgtcttcca ccagcagcac acaggtgccc gcgccgcgca ccccggcggc
      901 ggcccggccg acctcggcct ggtcgtccac cagctccagg gcatcggcga agtcgagcga
      961 gagggacgac tccggcttgg gcgggggcgg cgctgcggcc acccgagggg gagcggcggc
     1021 gggccccgtc ggccggggct ggggcgggcg ggcggcccgg tcctcccggg gcacgtcggt
     1081 gacccggagc agctcttcga gggtcgagtc gcccgcgagc acgtgccgga gcccgctttc
     1141 gaagagcgag cgcatcccgc tggcgcgcgc cgcctcggcg atgacgtcgg cggtggcgcc
     1201 ctgcccgatc cgccgctcca ggtcggagtt catgctcagc acttccatga tgctgaaccg
     1261 gccgcggtac ccggtcatcg cgcactcggc gcagccgacg gcacggagca gcttggcgtc
     1321 gggcgggacg tatcgcgtca ggcgctcggg cactggctcc tcccggggct cgaagcacgc
     1381 ctggcagagc cggcgcatga ggcgctgggc gaccaccccc cgcagggcgg aggcgatctt
     1441 gtacggctcc atccccatgt ccaccagccg cgtcacggcg ttgggcgcgt cgttggtgtg
     1501 gagcgtggag agcaccaggt ggccggtgag ggaggcctgg agcgcgatct gcgacgtctc
     1561 ctgatcgcgg atctcgccca ccagcaccac gtcggggtcc tgccggagaa tcgagcgcaa
     1621 cgcggaggcg aaggtcagac ccgccttgtc gtgcacctgg acctgcacga tgttctcgcc
     1681 cagccggtac tcgaccggat cctccaccgt cacgatgttg accccttcgc tctgaatcag
     1741 ccgaatggcg gagtagagcg tcgtggtctt gccggagccg gtgggcccgg tgaccaggat
     1801 gatgccctcc ttgtgggtca acagcccctt gatcgcctcc tgctcgtcct gatgcagccc
     1861 cagcgactcc aggttgagca ccgtggtgcg ctggctcagg atccggatga ccaccttctc
     1921 gcccagcgag gccgggagag tggagacgcg gaggtccacc ggctcgccgt tgaccgacac
     1981 ccgggcgcgc ccgtcctgcg gccggagccg gtccgcgatg tcgagcccgg acatgatctt
     2041 gatgcgggag atcaggggga tgccggcgtt gcggggaacc ttcatgacct gccgcagcac
     2101 cccgtcgatg cggtagcgga cgaccacgcc tccctcgatc ggctccacgt gaatgtcact
     2161 ggcccggctg accacgccgt ccgccagcat catgtccacc agcctgatga tgggacgctg
     2221 gctcgcctcc tccgcgctgg ccgccgcgta gtcgtcctcg tcctcggtga gctccttgac
     2281 ctcggtgtcc tcgtcgatgc cggccaggag tcgggagacg acctcctccc cgctccggta
     2341 gatctcgtcc agcttggccc ggagcttccc cggcgaggcg aggagcatgc gcacctccct
     2401 gcccgtcgcg aaggccagca tcttctcggc gtcgatgtcg aaggggttgg cggtggcgac
     2461 ttccaggtag gagtcggtct ggcccagcgg gaccacggtg aaccgccggg cgagctgctc
     2521 gggaatgtcg ccggtgaccc gggaatcgac ccgggagagg tccgcgacgg ggaggcggaa
     2581 ccgggtggcg atggccccga gcacctggtc gtcactcacc agtcgccgct gcaccgcggt
     2641 ctcccacagc gagaccggcg cgggcgcgac ctccaggcgc agcgccgcga gggcgtcgcc
     2701 ggccaggagc ggttcgacgg tggggaccag ccattcgtcc aggaactgca tgggggcggc
     2761 tcggagcggt tacggagtgc ggaaatctag cccggaccac cggttgggcg ctatcacaaa
     2821 atcccccacc agtcccgatt cacgtcgacg ctcacgccga tgtcgccgct ccggaggccc
     2881 acgccgacct cgaagcggag caggcccatc agccactcgg ccgcgacccc cgcgaccggc
     2941 cggaccccgt cggtgtcgcc ccaggggagc tccgcgagcg ggcgctccgc ccagccggcg
     3001 gcgaggaagg gtgccagggt gaggtgccgc ccggtgctcg cgaacgaccc cagcgggacc
     3061 gcgggcaccg gcacctccag ccgccactcg acgtgcgcca gcgcggcggc gcggcccccg
     3121 taggcccgga acggctcacc caggagcgtg cctcgtccgc ccaggacgaa gctgcggtag
     3181 gcggggagcc ggtcggtgcc cagccccagg tggagccggg tgaggagccg acccggtccc
     3241 ccgcccgtga gccagcgccc gtccgcggtg gcccggaggt actccccgtc tccctcgccg
     3301 ccctccagcg ccagccggcc ctggaagtcc cgctccaccg ccaggccccc actcgcccgc
     3361 tccactgccg cccgcgcgat ccgaaaggtg cccgcgccga gcgggggatt cggacggtag
     3421 gtcccgttcg cgggcgacga ggccacgccg acggagcggc tctcctccac cgcgagccgc
     3481 agctccaccg aggtccgacc cccgagccgg tggcggaggc cggccgcggc ggcgttgacc
     3541 aggacgtagt cgccgtagtc gtcgccggcc tcctgcgcga gcagggaatt gagcgcgggc
     3601 gagatcaccg ggaggtcggc gaagtcgccg atccgccgct ccgcgccggc gaagacctgg
     3661 gtggcgccgg cccccgccag aagggtgaga cctccggtga ggcggtcgtc cgaggtgccg
     3721 tagccgacct gcggccggag cctgacccgc ccgccgatac cgaccacccc gccgaagccg
     3781 agggcgagcc cctgcacccg gttcaccctc gcgagatcgc tgagcgagcc ggtggccagc
     3841 cggctcgagg gcaggccgcc gagcgcgcgg gagccggcga tgcgctccac ctgcacccgg
     3901 agcgcctcca tgtcctgggc gttgatcggc gcggccacgt cggcgatcgc ctccgacagc
     3961 ggcatcgccc agcccgagtc gcccggctgc ggccgcacca gccctccgat agcgggaccg
     4021 gccacgaccg aaggcggcat cccgacgttg aggtcatagt ccgcgatctc ccagcggccc
     4081 cggatgatgc cccgcgccgg gaagtcgaag tagctggcgc ggcggcggat ctcgatctcc
     4141 tgccggtagg gcagccacca gcggccctcg aagcgcgcgc tctccagggc gatggtgatg
     4201 tcctcgagct gacgatcgag gtaggccgcg ggcgtgaagc tgaagcggaa ccggaccagc
     4261 tccgccgatt cggtgtcgac gaacatcgtt ccgaccacca gcgggcgggc gaacgagcgg
     4321 ggccggacct gcacctcgtg caccgtgacc tcgccgcttc cggtgcggat ggtgagcgag
     4381 tccccgaggg cgtagcgata cagcagcgga ccggcccggg ccagcgggtg gatcgcatcc
     4441 cgcacctcgt cgccttcgcc gatccggatc acgtcgccga agttgttggt gacgatgccc
     4501 aggtggtccc gatggtactc gatgtcggtg gggaggaagg tcccgtcgcg ccagccgagc
     4561 accacctgct tgctgtggtt gggggcctgc caatacactt ccacgtccag ctcgtccgcc
     4621 ttgatcagcc ggggcggctc ggccagtccc tcgccgacct gcgccaggaa gaagacgaac
     4681 ccgtgggctc gggttcgata gctccgcagc atggagtcgg cttcgaccgc ggcgcgctgg
     4741 tcgatcgccc ggcgcaccag cgccagcgcc tcgggcgcat cccagctctg cgccgtgagc
     4801 ggcggcgcga acgtcagcag cgcgccgatc gtgccgaggt gccgcacacc tctcaccgtg
     4861 aacctccgcc agggagtcga tggccggaat attccggagg ctctggggac gagcaagctg
     4921 gctctgtctc gcggcggccg cctgcggcgg atcccgtgct ccgagcggcc ccgacgcgcc
     4981 accgcggacg gagacgcgag tggtgcccct gtccgaggcc atcgtgctgg agagctccgg
     5041 cccccagccg ccggacaccg cggtgacctt caccgccggc gaggcgcggg tcatcgtgct
     5101 ccggcacggc ccgccggagt acatcgtctt tgccgagctc agctttcccg cggcggcgtt
     5161 cgacacgcgg ggccgcgagg tgcgggtgga ggtgcggccc cgtcccgggg tgtacggtgt
     5221 ggacgtggcc accagcctcg ccatccggga cagcgccacg atcaccttca agtatccgcg
     5281 gtacttcgcc gcccccggcc gggcgcgcgc ggtgtacggg tccgacctcg cctacgagcg
     5341 cgccctggcc atcgggcgga tcctccccaa cggcctgctc gccctgctcg gctccacccg
     5401 acccttccat gacatgctgc gcgccccgct ccccgccgcg ggcacctact tcgtggcggc
     5461 cccgcaatga cgcagggctt cgatcgcttc gccgggcagg cgcggctcgg cggaggcatc
     5521 gtgccggtca cccgggaggt cgtgctcgac ggtgacaccc cggtgactgc gttcgcgaag
     5581 ctgcaccgcg ggccgtgggg cttcctcctc gagtcgctgg aggggggcga gcggtgggcc
     5641 cggtacacct ttctcgcgac cgagccccgc gaggtggtcc gctaccgcgg ccgcgagtgc
     5701 gcgcgctggg cgccgggcga ggagtggcgc gtggtcgaga ccgacctggc gccgctcgag
     5761 catctcgggc gcaccatgcg gcggcatccg ccggtcgtgg tgccggggct gccccgattc
     5821 accggcggag ccgtgggctt ctggagctac gacgtggtgc gcaccatcga gtcccttccg
     5881 gccgcaccac cggatgaccg cgacctgccc gatgccctcg tcatggtggc cgacaccctg
     5941 ctggtgctgg acaacctgtt caaccgggcc accgtgatcg cgagcgtcga ggtgccgccg
     6001 ggcgcggcac cggccgacct gcgccggctg caccaggagg cggaggcgcg gatcgaccgg
     6061 tggctggcgc gcctcgccgc gcccggcacc gtgcggccgc tggcgatcga gacggtgccg
     6121 ccgctgccgc ccgccacctc gccctatccc gacgaccgct tccagacgga cgtccgccgc
     6181 atcaaggagt acatcgccgc cggcgacacc ttccagacgg tcctgagccg gcggatcgac
     6241 gtggcggcgc cggatccgtt tctcagctac cgctacctgc gcgcgctgaa ccccgcgccc
     6301 tacctctact acctgcactg cgacgacatc cacctcatcg gcagctcgcc cgagatcctg
     6361 gtgagggtgg aggacggcga ggtcacggtc cgcccgatcg ccggcacccg tccgcgcggc
     6421 tccgacaccg cccaggacgc ggcgctggcc gacgagctgg ctgccgaccc caaggagcgt
     6481 gccgagcacc tgatgctggt ggatctcggc cgcaacgacg tgggacgggt ggcggagttc
     6541 ggctcggtgc ggctcaccgc gttcatgacg atcgagcggt actcgcacgt catgcacctg
     6601 gtgagcgagg tccgcggacg gcttcgggcc gagctcgatg ccgtggccgc gctcgccgcc
     6661 tgttttcccg ccggaaccgt gtccggggcg cccaaggtgc gggcgatgca gatcatcgac
     6721 gagctggagc cggtgcgccg ggggccgtac gccggcgcgg tgggctacgt gggctggggc
     6781 gcccgcacgc tcgacacggc gatcaccatt cgcacctgcg tgatccgggg agaccgggcc
     6841 tgggtgcagg ccggggccgg catcgtggca gactcggatc ccgccgggga gtggcgggag
     6901 acggaggcga aggcccgcgc ggtgctgctc gcgctggcgc tggcgggagc ggtgcaggcc
     6961 gggacggaac acccccccat gtcaccctga gcgcagcgaa gggccacggc cgccacccct
     7021 cccccgctat tttctctcca tgcccgcctt ccgcctcgtc agcgtttccg gcgaccagag
     7081 cttcgagctc ccgcccgggc ggagtctcgt cgtcggccgg ggcgtggcga cggacatcgc
     7141 gatctacgac ccgacgatct cccggcgtca cgccgagctg acggccgggg ccgacggggt
     7201 cgaggtgcgc gatctcggca gctccaacgg cacctgcatc aacggcagcc gggtcaccac
     7261 cggccggctg acggccaacg actcgatcac gttcggcaag gtgacctaca gggttgcggc
     7321 gacggcgccg gtgcaccccg cgccggagcc cgccgagccc ggggacacca tcgtccgcaa
     7381 gctcatggtg agcgccggca gctccgccgg catcaccagc cgggacgggc cgctcagccg
     7441 ggggcagctc cgggtcgcgg ccgcgaccgc cgaggagcgg caggcgaaga agctctccat
     7501 gctcctcgag gtggcgcaga agctcaccgg cgagctggag ctcgaccgcc tgcttcgggc
     7561 cgtggtggac atgaccttcc aggtcatgga ggtggaccgg gtcaccatcc tgctccgcaa
     7621 cgaggccacg ggtgagctgg tccccacgat ctccaagagc cgcctcgggg acacccaggt
     7681 gcagccggtg ccgcgctcga tcgtggacaa ggtcgtggag gagcgggtcg ccgtggtctc
     7741 ccacaacgcc cccgccgaca gtcgcttcaa ggggcgctcc atcgtgaccc agagcgtccg
     7801 cagcgccatg tgctcgccgc tgctcgacgc caaggaccag atcctcggcc tcctgtacgt
     7861 ggacaacctg agcgcgccgg ggaccttcag cgacgaggac ctccagttcc tggtggcctt
     7921 cagcgggctc gccgcgctgg gcatcaagaa cagccgcttc gccgagcaga tccggcggga
     7981 ggcgctggtg cgctccaact tcgagcgcta cttcgcgccc aacgtcgcgg cggcgatcgc
     8041 gcgacaggac ggcgatatcc ggctcggcgg ggagcgccgg ccgatcaccg tgctcttcag
     8101 cgacatccgg ggcttcaccg ccatcgcgga gtccatgggc cccgacgcgg tggcgaagct
     8161 cctgagcgag tatttcagcg agatggtgga ggtgatcttc gagcacggcg gcacgctgga
     8221 caagttcatc ggcgacgccg tcatggccct ctggggcgcc cccatcgcgc acagcgacga
     8281 ccccgaccgc gcgctgcagg ccgcggtcgc catgcagcgg accatcgagg agctgaatcg
     8341 gcgctgggtg gccgagggcc ggccggagat cggggtcggg atcggcatca gccacggcga
     8401 ggtgttcgcc ggcaacatcg gcagccaccg ccgtctcgag tacacggtgc tgggcgacgc
     8461 ggtgaacgtc gcggcgcggc tctgcgccga ggccgggccg ggcgagatcc tggtgagcga
     8521 gccgctgctg cggatggtga agcagccggt ggaatacgaa tacctgcccg agctggggtt
     8581 gaagggcaag tcgcaggtgg tgcaggtgta tcggctcaag cagacctagg ctggagcggg
     8641 gtgcctcctc cccggggcgg tccccgcccc gaactcgtac ccctctcccg cctcctccat
     8701 cagccggagc accagccgga cgggcagccc catcacactg aagaagtcgc cctcgatccg
     8761 ctccaccagc gccgcgccgt agccttggat gccgtacgcc cctgccttgt ccatcggctc
     8821 tccggtcgcc acgtacgcgc gcaggaaatc ctcggtcatc cgccggaagc tcacgttggt
     8881 gacgtcggtc gcctggtgga gccgatcgcc ctgcaccagg gcgaccgagg tcaccacctg
     8941 gtgggtgcgg ccctggagct tgcccagcat ccggagcgcg tcggcctcgt ccaccggctt
     9001 ctccagcacc tcgtcccgca cgatcaccgt ggtgtccgcg ccgagcacca ggcggccgct
     9061 cacgcccagc gccttctccc gcgccagccg ctccacgtag tcgagcggcg tctccgccgg
     9121 ccgacggacc tcgggcacgt tggacggcag cacccgcacc gggatgccga gcatctccag
     9181 cagctgccgg cggcggggcg agccggaggc cagcgtgagg ggctctcgcg tcatgcgttc
     9241 cgctccagga tcagggtgac cggcccgtcg ttgtggatct ccaccagcat ctgcgctccg
     9301 aactctcccg tcgccacctc gagcccgcgg cttcgcaggg ccgcgacgaa gcgctcgtag
     9361 agcgggatcg cctgctccgg ccgcgccgca tccacgaagg aggggcggcg gcccttggcc
     9421 gcgtctccgt agagcgtgaa ctgcgagacc accagcaccg cgccgtccac ctggtcgagc
     9481 ccgaggttca tctttccctc cgcatcggag aagagccgga gcccggccac cttctcggcc
     9541 atccaatcta ccgtcgcctc ggtgtcggta tgggtgagac cgacgagcag gcagagcccc
     9601 cgcccgacgg ctccggcggt ccggccatcg atcgtcaccg acgctcgcga gacccgctgc
     9661 agcacgacgc gcatgacggg ggctagattt cgctcgtctc ctggaggccc tggtacccgg
     9721 atggtgaaga taagcgcgat tcccgcggcg ccgcagcggc cggaaccgct cacgtggccc
     9781 gatgatcgtc tcaccgcggc atggctgggg cacgcgacgg tgctgctcaa cttctacggc
     9841 gtccggatcc tcaccgatcc cgtcctggag agtcgcgtcg gcatcggacg gggcgcggcg
     9901 aagctcggcc cgcgccgtct ggtgcggccc gcgctccgga cccgcgagct gccgccgctc
     9961 gacctcgtgc tgctctcgca cgcccacatg gaccacaccg acctcggcac gctccgctcg
    10021 ctgcggcgcg acctgccggt cgtggtccag cggggcaacc gcgacctcgt gcgccgcttc
    10081 cggcgggtgg aggagctgga ctggggcgag tccgtcgagg tcgcgggcac ctgcgtggaa
    10141 tcggtcgagg tgcgtcattg gggcgcgcgc atggtgaccg accgccaccg cggctatggc
    10201 ggctacctgc tgacccggaa cggcaccagc gtcctcttcg ccggcgacac ggcctacacc
    10261 gacgccttcg accgcctggg tgcccggacc cgggtggagc tcgccatcct gccgatcggc
    10321 gcgtacgacc cctggatcgc gaaccacgcg tccccggagc aggcgtggcg catgttccgg
    10381 gggctcggcg cccgatacct gctgccggtg caccactcca ccttccggct cagccgcgag
    10441 ccggtcgagg agccgctgga gcgactgcgg gcggccgcgg gatccgagag ctggcggatc
    10501 gtcacgccgg agatcggctc gacctggtgg acgccgggca ccggcggctg agcccgggcc
    10561 cgcatggaac gccggcctgc tggtcgcgcc gctgctgctg atcctgccgc tcccgtcccc
    10621 cgaggcgctg ccgtggctgg cggcctccgt cacctgcagc ctgctcgccg tgctcgcgct
    10681 ggtgcggggc tacgcccgcg gcggggggct ggccgtggtc tacccgctca cccgtgcgat
    10741 ctctccgctg gcggtggcgc tcctcgcgcg cgtcatggtg ggcgagcggc tgagtgccgg
    10801 cggctacgcc ggggtggcga tggtctcggc gggggtgggc ctcttcgcga cccggggagg
    10861 gctgcggggt tcggcggcgg tgggctgggg gctcaccggg ggcgtcctca cggcggcgta
    10921 caccgtgtgc gatgcgcagg gggcccggct ctcgccgtcc gtcgccggct acggggccac
    10981 cgtcgctctg ctcaatgcgc tggtgctcgg atcggtgcac cacctacggg tcggctcgat
    11041 ccggagcgtg ctcgcctccc atcccggcat cgccaccctc ggcgcgggcg cggccgcgat
    11101 ctcctatctc accatcctct gggtctatac ccggactcag atcgcgatcg gggcggccct
    11161 gcgtgacacc agcatcgtct tcgcggcgct gatcgccacc gtggtgctcc gcgagcggat
    11221 gaccccggcc cgcgtgggcg ccgttgcgct cgtcgcggcg ggcgccgtca ccctgcggct
    11281 cgcctgaggg atccgtcgac gcctagagcg caccccgatc ccaggggccg cggatcgcca
    11341 gcgtgcggcc cgcctcgggc ccgaggtcct gcgtcgagcc catgatgttg acgaacagga
    11401 cccgcccgtc ggggctgaag caggcaccgg cgaactcggt cgggttgagg atgttcttcg
    11461 ccagatcgaa gatcgccccg tccggggtga gcccgcggag gtactgttcc ccttccccat
    11521 cctcgcagat gacgatgccg ccccggggac tcaccgtgat gttgtcgggg tagtccagca
    11581 cgtcccgcga gggactctcg aacaccagca gcaggtcccc ccgatccggc cctctcggct
    11641 ggtagcgcca gacctggccc acctgtgcgt caccgccatt ggtggcgtga aagtagatgc
    11701 tgtcgtcgcc gtaccagcac ccctccagtc gggcgaacct cgcgcccccc cgcgcgtatc
    11761 cctggtcgaa gatggccgtc gggccagtgc ccgggcccgg gtccggctcc gcgatctcga
    11821 cccagcgcac cggcagccgc ttgccgacgg tctgccccga gcccgtgtcg tagttcggcc
    11881 ggccttcgat ggcgagcatc tgaagcctgc cgcccgcggc cagccgcccc cgctcgcggg
    11941 gcaggaaccg gtagaagccc gcagtggggg tccggtcctc ggtctcgtag acgatgccgg
    12001 tcgcccgatc caccgcgact gcctcgtgca cgaagcgccc catgtcccgg agcgggatgg
    12061 ggatcgcctg cccgtcaccg gag
//
LOCUS       DASUYN010000417         3105 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_570024, whole genome shotgun sequence.
ACCESSION   DASUYN010000417 DASUYN010000000
VERSION     DASUYN010000417.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3105)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3105)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3105
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_570024"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..302
                     /locus_tag="VF061_08205"
     CDS             <1..302
                     /locus_tag="VF061_08205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669523.1"
                     /translation="GILLAAALAVGGFYVIPRKRRQAKQDFRRRVDQIRARLREGLTR
                     QVHHEVTQSTDRINEAIAPYRRFVHSQQQRINEARGELVATEDALLRLRGEIERR"
     gene            324..1244
                     /locus_tag="VF061_08210"
     CDS             324..1244
                     /locus_tag="VF061_08210"
                     /inference="COORDINATES: protein motif:HMM:TIGR00765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HEX6669524.1"
                     /translation="MARQSGGVQLLKRTFKGFSEDDCPTMAAALSYYTVFSLPPLLVL
                     LLTLLGAVLDPQDIQGTIEAQMRDAMGTGGADQVRTILANADRPGAGGLVPTILSVVA
                     LLLGATGVFGQLQAALNKAWGVAPDPDKGGIKTMLVKRVFGIGMVLGLAFILLVSLVV
                     SAMLSAFGEELGRFLPSGLSAPVLEAINFVASLAVIALLFGAIFKVLPDAQIAWRDVA
                     VGAVVTALLFVAGKFALGLYLGRSNPGEAFGAAGALALMLVWIYYSSMIVLLGAEFTQ
                     VWAERRGSGIVPEKGAVRVIRETRRLAESH"
     gene            1262..1966
                     /locus_tag="VF061_08215"
     CDS             1262..1966
                     /locus_tag="VF061_08215"
                     /inference="COORDINATES: protein motif:HMM:NF016908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HEX6669525.1"
                     /translation="MTFVRSAVRRLRSAFGLDVYRRPEVAVETVRLGDPGGRWSVVPA
                     GLGPGTVVYALGVGTDISFERDLIARYGVVVHAFDPTPIALEWAASRTLPGGFVLHPY
                     GVADFDGRARFAPPRKRKFASFSLVRSGGLGAAVEAPVHRLATLAGMLRLPPPDLVKM
                     DIEGAEYGVLPDLLASGFRPSQILVEFHHRWREVGPRRTREALGLLARHGYRIADVSD
                     NGMEYGFLLSGGKREM"
     gene            2012..>3105
                     /locus_tag="VF061_08220"
     CDS             2012..>3105
                     /locus_tag="VF061_08220"
                     /inference="COORDINATES: protein motif:HMM:NF015649.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BTAD domain-containing putative transcriptional
                     regulator"
                     /protein_id="HEX6669526.1"
                     /translation="MLRLNTFGGLVLQQDGQLHTGPASQRRRLALLAVVASAGRRGVS
                     RDKLLALLWPDSEGEAARHSLYQAIHAIRRSAGSDEIFLGSGTLQLNPQLITSDVTEF
                     EEAVESGSHEQAVRLYRGPFLDGFRLESAPEYEQWQDGERVRHAREYASALESLASTS
                     AARGDHAAAVRWWRRLAAAEPVSTRAAVGLIEALVAAGDRAGALQFAGVHGSLVRQHL
                     ETEPDPEIDGWVARLRSGEIPAAAPAPRPRPAAGPEAAREAAARELDEIRRAFADRYQ
                     VGERIGESTLLLSFAARDRRDTRPVELHVLSPRLVGLGGGERMLEALERAAVLLKGTR
                     PTAVNLAWAVDRMLVRARGEGASSVRDALV"
BASE COUNT          404 a         1091 c         1131 g          479 t
ORIGIN      
        1 ccggcatcct gctcgccgcc gcgctggcgg tgggcggctt ctacgtgatt ccccggaagc
       61 gcaggcaggc caagcaggat ttccgccgcc gggtggacca gatccgcgcc cggctcaggg
      121 aggggctcac ccgccaggtc catcatgaag tgacgcagtc cacggaccgg atcaacgagg
      181 ccatcgcacc ttaccgtcgg ttcgtccaca gccagcaaca gcggatcaac gaggcgcgcg
      241 gcgagctggt cgccaccgag gacgcgctcc ttcggctccg cggagagatc gagcggcgct
      301 gaacgaaacg gcagggtgaa acgatggcaa ggcaatccgg cggggtgcag ctgctcaaac
      361 ggacgttcaa gggattcagc gaggacgact gcccgaccat ggccgccgcc ctctcctact
      421 ataccgtgtt ctccctccct cccctcctgg tcctgctgct caccctcctg ggtgcggtgc
      481 tggacccgca ggacatccag ggcaccatcg aggcgcagat gcgcgacgcc atggggacgg
      541 ggggcgccga ccaggtccgg accatcctgg ccaacgccga ccggccgggg gcgggcgggc
      601 tggtgccgac cattctcagc gtggtcgccc tgctgctcgg cgccaccggt gtgttcggtc
      661 agctccaggc ggcgctgaac aaggcctggg gcgtggcccc ggaccccgac aagggcggca
      721 tcaagaccat gctggtcaag cgggtgttcg ggatcgggat ggtgctcggc ctggccttca
      781 tcctgctggt gtcgctggtg gtgagcgcga tgctctccgc cttcggggag gaactgggcc
      841 ggttcctgcc ttcgggcctc tcggcgccgg tgctggaggc gatcaatttc gtcgcatcgc
      901 tcgcggtgat cgcgctcctc ttcggcgcca tcttcaaggt gctgcccgat gcgcagatcg
      961 cctggcggga cgtggccgtg ggcgcggtgg tgaccgcgct cctcttcgtg gccggcaagt
     1021 tcgccctcgg actctatctc ggccgcagca atccgggcga ggccttcggg gcggcgggcg
     1081 cgctcgccct gatgctggtg tggatctact actcctcgat gatcgtgctc ctgggcgcgg
     1141 agttcaccca agtctgggcc gagcggcggg gcagcgggat cgtgccggag aagggagccg
     1201 tccgtgtgat cagggagacg cggcggctgg ccgagagcca ctagccgtcg atccgctcag
     1261 cgtgacattc gtccggtccg ccgtccgacg gctgagatcc gcattcggcc tggacgtcta
     1321 ccgtcgtccc gaggtcgcgg tcgagaccgt gcgcctcggc gacccgggcg ggcggtggtc
     1381 cgtggtcccg gccggcctcg gtcccggcac ggtggtgtac gccctcggag tgggcaccga
     1441 catcagcttc gagcgcgatc tcatcgcccg gtacggggtg gtggtgcacg ccttcgatcc
     1501 cacgcccatc gcgctggagt gggccgcgtc gcggacgttg ccgggcggct tcgtcctgca
     1561 cccctacggc gtcgccgact tcgacggccg ggcccgcttc gcgccgccga ggaaacggaa
     1621 gttcgcctcc ttcagcctgg tgcgaagcgg gggcctgggc gccgcggtgg aagccccggt
     1681 gcaccggctg gccacgcttg ccggtatgct ccggctccct ccgccggacc tggtcaagat
     1741 ggacatcgag ggcgccgagt acggggtgct gccggacctc ctcgcgagcg ggttcagacc
     1801 ctcacagatc ctggtggaat tccaccaccg ctggcgcgag gtgggcccgc gccgcacccg
     1861 tgaggcgctc gggctcctcg cccgccacgg ctaccggatc gccgacgtat cggacaacgg
     1921 gatggagtac ggcttcctcc tgagcggcgg caaaagggaa atgtgaagcc cttttgcact
     1981 gtgcccggcc cggccccatc tttccggtcc aatgcttcgc ctcaatacgt tcggcggcct
     2041 cgttctccag caggacgggc agctgcacac cgggcccgct tcccagcggc ggcgtctcgc
     2101 cctgctcgcg gtggtggcct cggccgggcg ccgcggtgtc agccgcgaca agctgctcgc
     2161 cctgctctgg cccgacagcg agggtgaggc cgcgcggcac tcgctgtacc aggccatcca
     2221 tgcgatccgc cgctcggccg gcagtgacga gatcttcctg ggcagcggga cgctccagct
     2281 caatccccag ctcatcacca gcgatgtcac cgagttcgag gaggcggtcg agtcgggctc
     2341 gcacgagcag gccgtgcggc tctaccgggg ccccttcctc gacggcttcc gattggagag
     2401 cgcgcccgag tacgagcagt ggcaggacgg cgagcgggtc cggcatgccc gggagtacgc
     2461 gtcggcgctc gagtcgctgg cctccacctc ggccgcgcgg ggagaccacg cggcggcggt
     2521 ccgctggtgg cggcggctcg ccgccgcgga gccggtgagt accagggcgg cggtgggatt
     2581 gatcgaggcg ctcgtcgccg ccggggaccg ggccggcgcc ctccagttcg ccggggtgca
     2641 cggctccctg gtgcgccagc atctggagac cgaacccgac cccgagatcg acggctgggt
     2701 cgcgcggctc cgctcggggg agattcctgc cgcggcaccg gcgcctcgcc ctcgccccgc
     2761 ggccggtccc gaggccgccc gcgaggccgc cgcccgcgag ctggatgaga tccgccgcgc
     2821 cttcgccgac cgctaccagg tgggcgagcg catcggcgag agtaccctgc tgctctcctt
     2881 cgccgcgcgc gaccggcgcg acactcgccc ggtggagctg cacgtgctca gcccgcggct
     2941 ggtggggctc ggtgggggcg agcgcatgct ggaggcgctg gagcgggccg cggtgctgct
     3001 aaagggcacg cgaccgacgg ccgtgaacct cgcctgggcg gtggatcgca tgctggtgag
     3061 ggcccgcggc gagggcgcgt cgagcgtgcg cgacgccctg gtcga
//
LOCUS       DASUYN010000418         2641 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1894284, whole genome shotgun sequence.
ACCESSION   DASUYN010000418 DASUYN010000000
VERSION     DASUYN010000418.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2641)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2641)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2641
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1894284"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..255)
                     /locus_tag="VF061_08225"
     CDS             complement(<1..255)
                     /locus_tag="VF061_08225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669527.1"
                     /translation="MRLHRLVARGFRNLADLDCGVPAPGVALLGDNAQGKTNFLEAVY
                     YPVLFRSFRGAPDQEVTAFGAPAFHLEAVVQDAGVATLSAG"
     gene            complement(255..650)
                     /locus_tag="VF061_08230"
     CDS             complement(255..650)
                     /locus_tag="VF061_08230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669528.1"
                     /translation="MPGKVVWGGLLALLLGCEERERLVFEPDPVDQVGPTSSIDPPSM
                     DTTLTEGVPFVLGARSVDPSGVDTVYIEVLGANLSYLPLPAEGADTFSFAISLPTQGF
                     AGRTVTIGVYGVDVLGNPGPTVERRLTIQ"
     gene            complement(929..1711)
                     /locus_tag="VF061_08235"
     CDS             complement(929..1711)
                     /locus_tag="VF061_08235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX6669529.1"
                     /translation="MAYSTLLFEVRDAIATITINRPEKLNALNATVIAELGDAAARLR
                     DDAAIGGAILTGAGPKAFVAGADIGEIAAQGPVDGKARSLAGQRVFRDLERCGKPVIA
                     AVNGFALGGGCELAMACHLRIASEAARFGQPEVKLGIGPGYGGTVRLPRLVGPGRALE
                     LLLTGQMIDAQEAHRIGLVNRVVPADRLLPESEGLLRAILENGPLAIRACLEAVDAGL
                     DTGLDEALLLEANLFGLLSGTSDMREGTAAFGEKRKPAFRGE"
     gene            1757..>2641
                     /gene="mtnA"
                     /locus_tag="VF061_08240"
     CDS             1757..>2641
                     /gene="mtnA"
                     /locus_tag="VF061_08240"
                     /EC_number="5.3.1.23"
                     /inference="COORDINATES: protein motif:HMM:NF004326.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046523 -
                     S-methyl-5-thioribose-1-phosphate isomerase activity
                     [Evidence IEA];
                     GO_process: GO:0019509 - L-methionine salvage from
                     methylthioadenosine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-methyl-5-thioribose-1-phosphate isomerase"
                     /protein_id="HEX6669530.1"
                     /translation="MRLPNPIGWTPSGGIRLLDQTLLPGEERYLELETVDTVAEAIAT
                     LRVRGAPLIGIAAAMGVTLVSRGVGVGEREALQAVLEAVATLGATRPTAVNLHWALRR
                     MERRALRAVEAGEPLGPALRAEAQTIWDEDRAMCDRIGALGAPLIPAGSTVATICNAG
                     VLATGGIGTALAPIYHLHRTGRAPGVIVPETRPLLQGSRLTAWELSRAGVQCTVVADG
                     AVAGRLRRGDVACALVGADRIAANGDVANKVGTYALALAARAEGVPLYVLAPSSTIDS
                     ETPDGGAIPIELRSPDEVT"
BASE COUNT          386 a          948 c          928 g          379 t
ORIGIN      
        1 ccccgccgag agagtggcca cgcccgcgtc ctgcaccacg gcctcgaggt ggaaggccgg
       61 cgcgccgaag gccgtcactt cctggtccgg cgcgccccgg aaggaccgga acagcaccgg
      121 gtagtacacc gcctcgagga agttggtctt gccctgggcg ttgtcgccga ggagggcgac
      181 tcctggcgcc gggacgccgc agtcgaggtc cgccagattc ctgaacccgc gagccaccag
      241 gcgatgcagg cgcactactg gatcgtgagc cggcgctcga ctgtcggtcc agggttgcct
      301 agcacatcca ccccgtacac cccgatggtg accgtccggc cggcgaagcc ctgggtcggc
      361 aagctgatcg cgaagctgaa cgtgtcggcg ccctcggccg ggagcggcag gtagctcagg
      421 ttggcgccca ggacctcgat gtacaccgta tccaccccgc tcgggtccac cgagcgggcc
      481 ccgagcacga agggcacccc ctcggtcaga gtggtgtcca tcgagggcgg gtcgatgctg
      541 ctggtgggtc cgacctggtc gaccggatcg ggctcgaaca ccagccgctc gcgctcctcg
      601 caccccagga gaagcgccag cagacccccc cacacgacct ttccgggcat cccacaaaga
      661 tagtcgggca agtgggcgaa atgcagggcc ggagttggac ttacgcggcg ggcggaaggc
      721 ggaaaggcgg taaggggtaa ggcggaaagg cggtagggcg ggaaggccgt agggcgggac
      781 ggtgggacgg cgggacggtg attgtcatcc tgagcgaagc gaaggaggcc atgctgggga
      841 cagggcctcc ttcgcttcgc tcaggatgac actctgcagc cttaccgtcc tgccgcctta
      901 ccgccttacc gcctttccgc cttccgcctc actccccccg gaatgccggt ttccgcttct
      961 ccccgaacgc cgccgtcccc tcccgcatgt cggaggtccc cgagagcagc ccgaacaggt
     1021 tggcctccag caacagggcc tcgtccagtc cggtgtcgag cccggcatcc accgcctcca
     1081 ggcaggcccg gatggcgagc gggccgttct ccaggatcgc gcgaaggagg ccctcgctct
     1141 ccggcagcag ccgatccgcc gggactaccc gattcaccag gccgatccgg tgggcctcct
     1201 gcgcgtcgat catctgtccg gtgagcagca gctccagcgc ccgcccgggc cccaccagcc
     1261 gcggcagacg aaccgtgccg ccgtagcccg ggccgatgcc gagcttcacc tccggctgcc
     1321 cgaagcgcgc ggcctcgctg gcgatccgga ggtggcacgc cattgccagc tcgcagccac
     1381 cgccgagcgc gaagccgttc accgcggcga tcacgggctt gccgcagcgc tccaggtcac
     1441 ggaagacgcg ctgccccgcc agcgatcgcg ccttgccgtc caccggaccc tgggcggcaa
     1501 tctccccgat gtccgccccc gcgacgaacg ccttggggcc ggcaccggtc aggatcgctc
     1561 ccccgatcgc cgcgtcgtcc ctgaggcggg ccgccgcgtc gcccagctcg gcgatgacgg
     1621 ttgcgttcag cgcgttgagc ttctccgggc ggttgatggt gatcgtcgcg atcgcgtcgc
     1681 ggacctcgaa caggagcgtg ctgtaggcca tggcgatgac tcggctggaa aggtgggata
     1741 agagtatctt ctccgcatgc gacttcccaa ccccatcggg tggacgccgt cgggcggcat
     1801 tcgtctgctg gatcagacgc tgctccccgg cgaggagcgg tatctcgagc tggagacggt
     1861 ggacaccgtc gcggaggcga tcgcgacgct gcgggtgcgc ggcgcgccgc tcatcggcat
     1921 cgccgcggcc atgggcgtga cgttggtgag ccgcggggtc ggggtgggag agcgggaggc
     1981 gctgcaggcc gtgctcgaag cggtcgcgac cctgggtgcg acccgtccca ctgcggtgaa
     2041 cctgcattgg gcgctccgcc ggatggagcg ccgcgccctg cgggcggtcg aggccggtga
     2101 acctctgggc ccggcgctgc gcgcggaggc gcagaccatc tgggacgagg accgagccat
     2161 gtgcgatcgt atcggcgcgc tcggcgcccc gctcattccc gcgggctcga ccgtagcgac
     2221 gatctgcaac gccggcgtgc tggccaccgg cggcatcggc accgcgctcg ctccgatcta
     2281 tcatcttcac cgcaccggcc gggcgcccgg cgtgatcgtg cccgagacca ggccgctgct
     2341 ccaggggagc cggctcacgg cctgggagct gagccgcgcc ggcgtccagt gcacggtggt
     2401 ggccgacggc gcggtggccg gccgtcttcg ccggggcgac gtggcctgtg ccctggtggg
     2461 cgccgaccgg atcgccgcca acggcgacgt cgccaacaag gtcgggacct atgcactcgc
     2521 cctggccgcg cgggcagagg gcgtgccgct ttatgtgctt gcgcccagct ccacgatcga
     2581 ttccgagaca cccgatggcg gcgccatccc catcgagctt cgctcccccg acgaagtgac
     2641 c
//
LOCUS       DASUYN010000419         4197 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_351461, whole genome shotgun sequence.
ACCESSION   DASUYN010000419 DASUYN010000000
VERSION     DASUYN010000419.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4197)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4197)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4197
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_351461"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            242..3325
                     /locus_tag="VF061_08245"
     CDS             242..3325
                     /locus_tag="VF061_08245"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX6669531.1"
                     /translation="MILSDLSIRRPVLASMLSVALVLFGVIGYLNLAVREFPDVDPPI
                     ISVQTALPGANPQVVESAVTDILEEELSTVPGLRTLTSSSAEQFSNITLEFTLDRPVE
                     DAAQDVRDKVSRVRGRLPDDVEEPVVAKQEADAQPFMWLALSGANYDLLQLSDLADRV
                     VKTRLQSVPGVGRIFIGGERRYSMRVWLDASELAARGVTVQDVEDAIRSRNVEIPAGR
                     IESDRREFTVRSLGELKTPEEFAKLVVSARDGQMIKLDDLGRVELGPEDDRSALRYRG
                     SPSVGVGVVRQSKSNLVEVADAVHAALPAISGALPPGVKIIATFDQSIFVKRSIQEAE
                     ETLLIAALLVVIIIFVFLRNFRATIIPALAIPTSIVATFAVMYFLGFSINNLTLLALT
                     LAIGIVVDDAIIVLENAFRHQEELHEDPETAAVNGTREIAFAVIATTISLVAVFTPLA
                     FLQGNTGRLFNEFGIAVAGSVIISGFVALTLTPMLCAKILRVPHRHGALYQALERGFT
                     GLSNGYGRTLRWALQHRGLMVGLAVLVALGAVVAFRSLKREFVPAEDRGFFFTMVIAP
                     EGSTLNYTDGYIRQIERFWAEVPEVEHYFSITGAFFGTPSRGGVFARLTDWSDRDRSV
                     QDIIGEVQPRLFGVPGIMAFAINPPAFGGFGNPVQFVVQHSDFEQLQAGVAAVMARAA
                     KVPGLVNLDSDLRVNKPELTVSFDRERAEDLGVPVRDVASALQTLLGGREVSTFTRNN
                     RLYDVIVQLSPHARATPSDMSGIYLRGRDGALVQLDALASVKEGVGPRQLAHFNRVRS
                     ATISAGLAPGFTLGEALDSMYAIAGEVLPRGSTTALAGESRELEESGTALYFAFALAL
                     VVVFMVLASQFESLVHPFTVLLAVPLAVTGALLTLLAAGSTLNLYSQIGMILLIGLVT
                     KNSILLVDYTNQLKAKGLDAVEAALEAGRIRLRPILMTSVATVMGALPIALGLGAGSI
                     SRRPLGYAIVGGLVFSTLLTLYMVPAVYVIFDGLVARLRRPAGPPAREYAAAEAE"
     gene            3325..>4197
                     /locus_tag="VF061_08250"
     CDS             3325..>4197
                     /locus_tag="VF061_08250"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEX6669532.1"
                     /translation="MLALLLALQVATVPASTAEDSLPRLTLAETLRRSAQTDPDYVRA
                     LGQIEDAEWGRRAATLAFFVPSVELGLDETKYSQAFFNPADPANPTSTLVVGRATATY
                     EIFSLRKFAELSRTRAEVESAEAGELEERYRAALEAESSYYDVLVAQELTGVAGERAA
                     RAREGLTVARARVASGAAVQTDSLQLMLELIRADVELLRQSNALRTARLELGRRVGAA
                     GPVDAEPLDTAPAPDLPLALPEAIGYALDQGPQYRSARATERSAEAELRSQRSDYLPT
                     LAVSGLHQRYDTEIF"
BASE COUNT          593 a         1501 c         1433 g          670 t
ORIGIN      
        1 acatctcctc gatgaccgaa tggatacgct ggaacttggg cggcagggac tgcagatagg
       61 tgagctgggc ctgctgccgg gacgagagct tgacggccat ggggctcggt gatgtcaggg
      121 acgagtcaat gtaatagcgg aggtgaatct ccgccgtgga cgtgccgtaa ggcaacatgc
      181 ccaaacggcg gcgaggtccg ccccgaagta tgatccgcaa ctactcctcc ggacccgagc
      241 catgatactg tcggacctgt cgattcggcg ccccgtactg gccagcatgt tgagcgtcgc
      301 gctggtgctc ttcggggtca tcgggtacct gaacctcgcc gtccgcgagt tccccgacgt
      361 cgatccgccc atcatctcgg tccagacggc gctccccggg gccaacccgc aggtggtgga
      421 gtcggcggtg accgacatcc tcgaggagga gctgagcacg gtgccgggac tgcgcaccct
      481 caccagctcc agcgcggagc agttcagcaa catcaccctc gagttcaccc tcgaccggcc
      541 ggtggaggac gccgcccagg acgtgcgcga caaggtgtcg cgggtgcgcg gccggctgcc
      601 ggacgacgtg gaggagccgg tcgtcgccaa gcaggaggcg gacgcccagc cgttcatgtg
      661 gctggcgctg tcgggcgcga actacgacct ccttcagctc tcggatctgg ccgaccgggt
      721 ggtgaagacc cggctccaga gcgtcccggg cgtgggccgg atcttcatcg ggggcgagcg
      781 gcgctactcg atgcgcgtct ggctcgacgc ctcggagctc gcggcccggg gcgtcacggt
      841 gcaggatgtc gaggacgcca tccggagccg gaacgtcgag attcccgccg gccgcatcga
      901 gtcggatcgg cgcgagttca ccgttcgctc gctgggcgag ctcaagacac cggaggagtt
      961 cgccaagctg gtcgtgtcgg cccgcgacgg ccagatgatc aagctcgacg atctcggccg
     1021 ggtcgagctc ggccccgagg acgaccgcag cgccctgcgc tatcgcggga gtccgtcggt
     1081 cggggtcggc gtcgtgcggc agtccaagtc gaacctggtc gaggtcgcgg acgcggtcca
     1141 cgccgcgctt cccgccatca gcggagcgct gccaccgggc gtgaagatca tcgcgacgtt
     1201 cgaccagtcg atcttcgtca agcgctccat ccaggaggcg gaagagaccc tgctcatcgc
     1261 ggcgctgctg gtggtgatca tcatcttcgt gttcctccgc aacttccgcg cgaccatcat
     1321 ccccgcgttg gcgattccca cctccatcgt ggcgaccttc gcggtgatgt acttcctcgg
     1381 tttctcgatc aacaacctca ccctgctcgc gctcacgctc gccatcggca tcgtggtgga
     1441 cgacgcgatc atcgtgctgg agaacgcctt ccgtcaccag gaggagctgc acgaggaccc
     1501 cgagacggcg gccgtcaacg gcacccgcga gatcgccttc gcggtcatcg cgaccaccat
     1561 ctcgctggtg gccgtcttta ccccgctcgc cttcctccag ggcaacaccg gccggctctt
     1621 caacgagttc ggcatcgcgg tcgccgggtc ggtgatcatc tcgggcttcg tggcgctgac
     1681 cctgaccccg atgctgtgcg cgaagatcct gcgggttccc caccggcacg gcgcgctcta
     1741 ccaggcgctg gagcggggat tcaccgggct ctcgaacggc tacggccgca ccctccggtg
     1801 ggcgttgcag caccgcgggc tcatggtggg gctcgccgtc ctggtcgcgc tgggtgcggt
     1861 ggtcgccttc cgctcgctca agcgggagtt cgtgccggcg gaggaccgcg gcttcttctt
     1921 caccatggtc atcgcccccg aggggtccac cctcaattac accgatggct acatccggca
     1981 gatcgagcgc ttctgggccg aggtgcccga ggtggagcat tacttcagca tcaccggcgc
     2041 cttcttcggc acgcccagcc gcggcggcgt cttcgcccgg ctcaccgact ggagcgaccg
     2101 cgaccgcagc gtgcaggaca tcatcggcga ggtgcagccc aggctcttcg gcgtgcccgg
     2161 catcatggcg ttcgcgatca atccgccggc cttcggcggc ttcggcaacc cggtgcagtt
     2221 cgtggtgcag cattccgact tcgagcagct ccaggccggg gtcgcggccg tgatggcgcg
     2281 cgccgcgaag gtgcccggcc tggtcaacct ggattccgac ctgcgggtca acaagccgga
     2341 gctcaccgtc tccttcgacc gggagcgcgc ggaggatctc ggcgtcccgg tccgggatgt
     2401 cgcctccgcc ctccagacgc tgctcggcgg ccgcgaggtg agcaccttca cccgcaacaa
     2461 tcggctgtac gacgtcatcg tgcagctcag cccccacgcc cgcgcgactc ccagcgacat
     2521 gagcgggatc tacctccgcg ggcgcgacgg cgcgctggtg cagctggacg cgctcgcgtc
     2581 ggtgaaggaa ggggtcggac cgcgccagct cgcgcacttc aaccgggtcc gctcggcgac
     2641 gatcagcgcc ggcctcgcgc cgggcttcac cctcggtgag gcgctcgact ccatgtacgc
     2701 catcgcgggc gaagtcctgc cccgaggctc gaccaccgcg ctcgccggcg agtcgcgcga
     2761 gctggaggag agcggcaccg cgctctactt cgccttcgcc ctcgccctgg tggtggtgtt
     2821 catggtgctg gcgtcccagt tcgagtccct ggtgcacccc ttcacggtcc tcctcgccgt
     2881 gccgctcgcg gtgaccgggg ccctgctcac cctgctggcg gccggcagca cactcaacct
     2941 gtacagccag atcggcatga tcctgctgat cgggctggtg accaagaact cgattctgct
     3001 ggtggactac accaaccagc tgaaggccaa ggggctggac gcggtggagg cggcgctcga
     3061 ggcgggccgg atccgactgc gaccgatcct catgacctcg gtcgccacgg tcatgggcgc
     3121 gctgccgatc gccctcgggc tcggggccgg ctcgatcagc cggcggccgc tggggtacgc
     3181 catcgtcggc gggctggtgt tctccaccct gctcacgctc tacatggtgc cggcggtgta
     3241 cgtgatcttc gacggcctcg tggcccgatt gcgccggccc gccggcccgc cggcccgcga
     3301 gtacgccgcg gcggaggcgg agtgatgctg gccctgctgc tcgcgctgca ggtcgcgacg
     3361 gtgcccgcct cgacagcgga ggattcgctg ccccgcctga cgctcgccga gacgctccgc
     3421 cgctccgccc agaccgatcc cgactacgtg cgcgcgctgg ggcagatcga ggatgccgaa
     3481 tggggacgcc gggcggcgac gctggcgttc ttcgtgccct cggtcgagct cggcctggac
     3541 gagaccaagt actcccaggc gttcttcaac cccgcggatc ccgccaatcc gaccagcacc
     3601 ctcgtggtcg ggcgggccac ggcgacgtac gagatcttca gtttgcgcaa gttcgccgag
     3661 ctgtcccgga cccgcgccga ggtggagagc gcggaggcgg gggagctgga ggagcgctac
     3721 cgcgcggccc tggaggccga gtcgagctac tacgacgtgc tcgtcgccca ggagctgact
     3781 ggggtcgcgg gggagcgtgc cgcccgggcc agggaggggc tgaccgtcgc gcgcgcccgg
     3841 gtcgcctcgg gggccgcggt gcagaccgac tcgctccagc tcatgctgga gctgatccgg
     3901 gccgacgtgg agctgctccg ccagtcgaac gccctccgga ccgcccggct cgagctcggc
     3961 cgccgggtgg gtgccgcggg ccccgtggac gccgagcctc tcgacaccgc cccggccccc
     4021 gatctcccgc tcgcgcttcc ggaggcgatc ggctacgccc tggaccaggg cccccagtac
     4081 cgctcggccc gcgccaccga gcgctccgcc gaggccgagc tccggagcca gcgcagcgac
     4141 tacctgccca ccctcgcggt gagcggcctg caccagcgct acgacaccga gatcttc
//
LOCUS       DASUYN010000420         2099 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_351624, whole genome shotgun sequence.
ACCESSION   DASUYN010000420 DASUYN010000000
VERSION     DASUYN010000420.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2099)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2099
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_351624"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1204
                     /locus_tag="VF061_08255"
     CDS             <1..1204
                     /locus_tag="VF061_08255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669533.1"
                     /translation="TLAQATGVSAGTAAKLGWLYFGWFHHAAVTTRLTSVEGGEAVTA
                     NVALAMMLGTFLAIAILYKGGRAVADGARGGALARALHGMKVAPAYAIPPFLVSVLVT
                     IDIPIPRNGLVAGSLQMPSGGLSWLVLPLLIAAAAGAAGGLRSGRYELISLDPWGRRA
                     AGAIAGGLRMLVIGLVLSFAGVLVLAAIRPGATMTYFRTISGTPSDQTTMNIAHHVLL
                     LPNQSMWLLVPAMGGCDGLSGGGVSATFLCYSKVPTTVSVTPGLASETPVVRADFAKA
                     PSGYLLFLLVPAVSVVLGGRYAARKRARIKGEAIAMGAASGVVFAVLVVVGSWLASLS
                     AAVSSPVGGIPANASVLIGPVVGTAGLLALAWGVLGGALGGWLGGREFPARAPLSRTL
                     KAPSAVAR"
     gene            1243..2001
                     /locus_tag="VF061_08260"
     CDS             1243..2001
                     /locus_tag="VF061_08260"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX6669534.1"
                     /translation="MTKNEGSSKGRSREQFRARLGVVVVEPLAVVRAGVARLIGDPPD
                     MQVLAEAGTADACLAAVRRIRRSRLVVLVGLGLPGERDSLWLIGTLRERYPEATILAS
                     GAGADATTISRGLLLGADGYLDKDVDPVEFLEAIRQAARGEAVLAGAPVDWVGSIADG
                     FDRTRHIESQLTRREREVLQVAAEGLTAREIARHLGVRERTVTTHLGRIYGKLGVNSR
                     VGAVIEAARTGLVTVGTPQSGGSRSAPTTGVAGR"
BASE COUNT          263 a          695 c          792 g          349 t
ORIGIN      
        1 gaccctcgct caggcaaccg gagtgtcggc cgggacggcc gccaagctgg gctggctcta
       61 tttcgggtgg ttccaccacg cggccgtcac gactcgcctg acctcggtcg aaggcggtga
      121 agccgtcacg gcgaacgtag ccctcgcgat gatgctggga acgttcctcg cgatcgcgat
      181 cctgtacaag ggaggccgcg ccgtggcgga cggggcacgc gggggtgccc tggcgcgagc
      241 gctccacggg atgaaggtgg cgcccgcgta cgcgatccct ccattcctgg tgtccgtgct
      301 cgtgaccatc gacatcccca tcccacggaa cgggctggtg gcgggcagcc tccagatgcc
      361 atcgggggga ctctcgtggt tggtgctccc actgctcatc gcggccgcgg cgggggccgc
      421 cggcggcctt cgatcgggcc gctacgagct gatctcactc gatccgtggg ggcgccgcgc
      481 ggccggggcc atcgccggtg ggctgcggat gctcgtcatc ggcctcgtgc tgtcgttcgc
      541 cggggtcctg gtgctggcgg cgatccgccc cggcgcgacc atgacctact tccggacgat
      601 ctccgggacg ccctccgacc agacgaccat gaacatcgcg caccacgtgt tgctgttgcc
      661 gaaccagtcg atgtggctgc tggtcccggc gatgggtggc tgcgacggtc tgtccggagg
      721 aggggtctcc gcgaccttcc tctgctactc gaaggtcccg acgacggtat cggtgacccc
      781 cggcctggcc tccgagacgc cggtggtccg ggccgatttc gcgaaggcgc catcgggcta
      841 cctgctgttc ctcctggtgc ccgcggtgtc ggtggtcctt ggaggccgtt acgccgcaag
      901 gaagcgcgcg cggatcaagg gggaggccat cgccatggga gccgcgtccg gcgtggtctt
      961 cgcggtcctg gtggtcgtcg gctcctggct ggcctcgctg tcggctgccg tctcctcgcc
     1021 ggtggggggc atccccgcga acgcctcggt cctgatcgga cccgtcgtgg ggaccgcggg
     1081 gctccttgcg ctcgcgtggg gagtgctcgg aggcgcgctc gggggctggc tgggaggaag
     1141 ggagttccca gccagggcac cgctctcgag gactctgaag gcgccaagcg cggtggcccg
     1201 atgaagccgc ccaaccccgg cccgggtcct agctaggcag ggatgaccaa gaacgagggg
     1261 tcgtcgaagg ggaggagtcg ggagcagttc cgagcgcgcc tgggtgtggt ggtcgtggaa
     1321 ccgctcgccg tcgtgcgcgc cggcgtggcg aggctgatcg gtgacccgcc ggacatgcag
     1381 gtcctcgcgg aggcgggcac ggccgacgcg tgcctcgccg ccgtgaggcg gatccggcgt
     1441 tccaggctgg tcgtcctcgt ggggctgggt ctgcccgggg agcgcgattc gctgtggctg
     1501 atcgggaccc tccgcgagcg ttacccggag gccacgatcc tggcctcggg cgcaggggcc
     1561 gacgccacga ccatctcgcg cgggctgctc ctgggggcgg atgggtacct ggacaaggac
     1621 gtcgatcccg tcgagttcct cgaggcgatc cgccaggccg cccggggcga ggccgtcctg
     1681 gccggcgccc cggtcgactg ggtgggctcc atcgccgacg gcttcgatcg gacgcggcac
     1741 atcgagtccc agctgactcg acgcgagcga gaggtgttgc aggtggcggc cgagggcctg
     1801 accgcgcggg agatcgcgcg tcatctcggc gttcgtgaga ggaccgtgac gacgcacctg
     1861 ggccgcatct acggcaagct cggtgtcaac agccgggtgg gcgccgtgat cgaggcggcc
     1921 cgaacgggtc tcgtcacggt cggcaccccg cagagcggag gatcccgatc cgccccgacc
     1981 acgggagtgg cgggtaggta gcgtttctcg tgtaggcgca tctcccgacc cttcggttcg
     2041 taaccttcgc gctctggagt cgttgtctat aggtgtggta ccccccggat gtgagtcgt
//
LOCUS       DASUYN010000421         5363 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1673381, whole genome shotgun sequence.
ACCESSION   DASUYN010000421 DASUYN010000000
VERSION     DASUYN010000421.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5363)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5363)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5363
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1673381"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            178..1164
                     /locus_tag="VF061_08265"
     CDS             178..1164
                     /locus_tag="VF061_08265"
                     /inference="COORDINATES: protein motif:HMM:NF014375.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEX6669535.1"
                     /translation="MTNPADLQTPRYPVRLVAVRTGLSPHVLRAWERRYHVVAPTRTE
                     GGQRLYSDLDVQRLLLLRQLSDRGHAIGRVAALPLEELARLEQESAEQAPAPGPGRSD
                     DRGLDLPEQARAEIIAAAVAAALQATRRLDPVELQAVLERAAVTLGVPAFIDQVVAPA
                     LAQIGHGWSERSVSVGQEHMATAVFRRVLGWLLRVYEATSGAPRIVVATPPGHGHELG
                     ALMAAASAAAEGWGVTYLGPDLPVGDLVGTAAQAGARAVAVSAVYQPSGVDLLRTLRE
                     TRAALPEDIPLLAGGTAALAVRAEAQAAGVYVVDSLAEFRALLPRLAEAPAA"
     gene            1161..2603
                     /locus_tag="VF061_08270"
     CDS             1161..2603
                     /locus_tag="VF061_08270"
                     /inference="COORDINATES: protein motif:HMM:NF022517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2867 domain-containing protein"
                     /protein_id="HEX6669536.1"
                     /translation="MTRRDELILLTGATGYVGGRLRRALEADGRRLRCMARRPEYLRP
                     RVAEGTEVVAGDVLQPESLAGALKGVDTAYYLIHSMAAARDYASNDRRGAESFARAAR
                     EAGVRRIVYLGGLGEGAGLSRHLASRQEVGRILRDSGVPTLEFRASIVIGSGSLSFEL
                     VRALVEKLPAMVTPSWVDTPTQPIGVEDLVAYLVAALDRPLERSAVYEIGGPDRVSYG
                     ELMREYGRLRGLRRAMIPVPVLTPRLSSLWLALVSPVYSQVGRELIDGVRNPTVVRDD
                     RALRDFTIRPRGVREMLARALVNEDLGFAATRWSDALSSRRAGPGWGGVRFGSRRVDS
                     RAAWVASPPERAFLPISRIGGRAGWYYGDRLWRLRGLLDLAVGGPGLRRGRRDAESVT
                     LGDTVDFWRVEAIEPSRLLRLAAEMRLPGRAWLQFEVTPENGGSLIRQTALFDPVGLG
                     GLVYWYALWGIHQMVFAGMLRNIVRAAEAA"
     gene            2600..3988
                     /locus_tag="VF061_08275"
     CDS             2600..3988
                     /locus_tag="VF061_08275"
                     /EC_number="4.1.99.3"
                     /inference="COORDINATES: protein motif:HMM:NF013071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribodipyrimidine photo-lyase"
                     /protein_id="HEX6669537.1"
                     /translation="MTDDLRIHAGGDRTPRPGGDHVLYWLQSTLRAEDNHALDFAVEQ
                     ANRLGLPVLVYHRLRHDYPWSSDRIHTFVLESVMDLHRDFAERGIQYAFHLERDWSET
                     AIREAQGSPSPLLELARRAALVVTDYFPTFLVPRETATLRAQVRTPVVAVDSATVVPV
                     RYHEREYLTAPPFRARLASALPHYLDRAPAPEPKVRRRLDLPFEPTLPYHGSIPALVA
                     SCDIDHAVPPVPGMPGGTRAARLRLEGFLRHGLPRYAEDRGDPNAGVTSGLSPYLHFG
                     NISPREVVRRAREAGPGDQVAKFEDEILTWRELAFNFTHFNRQHRTVAAIPEWAREEL
                     RKGEADVRPALYSPEDLEQARTGEPLWNAAQRAYLRDGWMPNPLRMLWGKSVVQWTRT
                     VREALGILEHLNNKYALDGRDPSSYLNFHWIFGRFDRPFYRRPIFGTVRSMSLRAAER
                     KFDVRRVVLRYA"
     gene            complement(3979..4593)
                     /locus_tag="VF061_08280"
     CDS             complement(3979..4593)
                     /locus_tag="VF061_08280"
                     /inference="COORDINATES: protein motif:HMM:NF021511.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2238 domain-containing protein"
                     /protein_id="HEX6669538.1"
                     /translation="MYELALLISAAAVLVWSGIEPHDRFTWLLEVAPVLIGAPMLILL
                     RPRLRLTRLVYTLLWIHAVILMVGGKYTYAEVPLGFWLQETFGFARNHYDRIGHFAQG
                     FVPAMLAREVFIRRSPLAGSRWLPFVVVCFCLAFSALYELIEFWTALATGEAAEAFLG
                     TQGDVWDTQWDMQMALVGACTALLLLSRPHDRALERLEAPPSQA"
     gene            complement(4641..>5363)
                     /locus_tag="VF061_08285"
     CDS             complement(4641..>5363)
                     /locus_tag="VF061_08285"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX6669539.1"
                     /translation="HILGVTGLLRTMGLQDRTAPVTLYGPRGAQRVLGAAISLGIERN
                     KFPVEIHEVGPGDRLPREQYDIVVFETEHRPDTVGFAVAEHTRLGRFNPDRARELGVP
                     EGPLWGRLHKGETIVLEDGRSVAPSDLVGSPRRGRTLVYTGDTRPSLAVVEAARGADL
                     LIHEATFGSDELERAKETGHSTAAEAARVAVEAGVRRLVLTHISPRYTRDAPELLAEA
                     RAIFPETVVARDGLTVDVPFAE"
BASE COUNT          728 a         1936 c         1910 g          789 t
ORIGIN      
        1 gccgcccacg accaggagca cggcggccag tacgtccagc ttcttcatat agacctcgct
       61 gtgagtgatg tgctgtctaa caactgtcga gcaatctaag cccagaacgc ccattgtcaa
      121 gggttggtct aactaattcc cttgacatta cctagacaaa gacctacctt cctccgcgtg
      181 acgaaccccg ccgaccttca gaccccgaga taccccgttc gcctcgtcgc agtgcggacc
      241 gggctctccc cccatgtgct ccgtgcctgg gaacggcggt atcacgtggt ggcaccgacc
      301 cggaccgagg gtggccagcg gctgtactcc gatctggatg tccagcgact cctcctcctc
      361 cggcagctct ccgatcgggg ccacgccatc ggccgcgtcg ccgcgcttcc actggaggag
      421 ctggcccggc tcgagcagga atcggcggag caggctccgg cgccggggcc gggccggtcg
      481 gatgaccggg gcctggatct ccccgagcag gccagagccg agatcatcgc cgctgccgtc
      541 gccgccgcgc tccaggcgac gcgccggctc gacccggtcg agctccaggc cgtactcgag
      601 cgcgccgccg tcaccctcgg cgtcccggcc ttcatcgatc aggtggtggc gcccgcgctg
      661 gcgcagatcg ggcacggctg gagcgagcgc tccgtttcgg tggggcagga gcacatggcg
      721 acagcggtct tccggcgggt gctggggtgg ctgctgcgcg tctacgaggc gacgagcggg
      781 gctccgcgga tcgtggtggc gacccctccg ggccacgggc acgagctcgg cgcgctgatg
      841 gcggccgcga gcgcggccgc ggagggctgg ggcgtcacct acctcgggcc cgacctgccg
      901 gtgggggatc tggtcggcac cgcggcgcag gcgggcgccc gcgccgtcgc cgtcagcgcc
      961 gtctatcagc ccagcggcgt agatctgctc cgcactctcc gggagactcg cgcggccctg
     1021 cccgaggaca ttccgctcct agccggcggc acggccgcgc tcgccgttcg cgccgaggcg
     1081 caggccgccg gagtctacgt ggtggattcc ctggcggagt tccgggccct gcttccccgc
     1141 ctggcggagg cgccggccgc atgacacggc gggacgagct gatcctcctc accggtgcca
     1201 ccggctatgt cggcggccgg ttgcgccgcg cgctggaggc cgatggacga cggcttcgct
     1261 gcatggcgcg tcggccggag tatctccggc cccgggtcgc cgaggggacc gaggtcgtcg
     1321 ccggcgacgt gctgcagccc gaaagcctcg ccggcgccct gaagggggtg gacaccgcgt
     1381 actatctgat tcactccatg gccgccgctc gcgactacgc gtcgaacgac cgccggggtg
     1441 ccgagtcgtt tgcccgcgcc gcccgcgagg ccggcgtccg gcggatcgtc tacctcggcg
     1501 gcctgggcga aggcgcgggt ctctcccgtc atctggcgag ccggcaggag gtgggccgga
     1561 tcctccggga ctcgggcgtc cccacgctcg agttccgggc ctcgatcgtg atcgggtccg
     1621 gcagcctctc gttcgagctg gtgcgcgccc tggtcgagaa gctgcccgcg atggtcacgc
     1681 ccagctgggt ggacaccccg acccagccga tcggcgtcga ggatctggtg gcctacctgg
     1741 tggcggcgct ggaccggccg ctggagcgca gcgcggtcta cgagatcggc gggccggacc
     1801 gggtctccta cggcgagctc atgcgggagt acggccggct ccgcggcctg cgccgggcga
     1861 tgattccggt gccggtgctc accccgcggc tgtcgagcct ctggctggcc ctggtgtcgc
     1921 ccgtgtacag ccaggtgggc cgggagctga tcgacggagt gcgcaacccg accgtcgtgc
     1981 gcgatgaccg cgcgctgcgc gacttcacca tccgcccgcg gggcgttcgc gagatgctcg
     2041 cgcgcgccct cgtcaacgag gacctgggct tcgccgccac ccgctggtcc gatgccctgt
     2101 cctcccgccg cgcgggcccc ggctggggcg gggtgcgctt cggctcgcgc cgggtggact
     2161 cgcgggccgc ctgggtcgcc agcccgccgg agcgggcctt cctcccgatc tcacggatcg
     2221 gcggccgggc gggctggtac tacggcgatc ggctctggcg tctgcgaggg ctgctcgatc
     2281 tcgccgtggg aggtcccggc cttcgccgcg gccgccgcga cgccgaatcg gtcaccctcg
     2341 gcgacacggt ggatttctgg cgggtggagg cgatcgagcc cagccgcctc ctgcggctgg
     2401 ccgccgagat gcggctgccg gggcgcgcgt ggctccagtt cgaggtgacg ccggagaacg
     2461 gcgggagcct gatccggcag accgcgctct tcgatccggt cgggctcggc ggactggtgt
     2521 actggtacgc gctctggggt atccaccaga tggtgttcgc ggggatgctt cgcaacatcg
     2581 tccgtgcggc ggaagccgcg tgacggacga cctccggatc cacgccggcg gcgaccgtac
     2641 gccccgtccc gggggtgacc atgtcctcta ctggctgcag agcaccctgc gcgcggagga
     2701 caaccacgcg ctcgacttcg ccgtcgagca ggccaaccgg ctcggactcc cggtgctggt
     2761 ctaccaccgg ctgcggcacg actacccctg gtccagcgac cggattcaca ccttcgtcct
     2821 cgagtcggtg atggatctcc accgcgactt cgcggagcgc ggcatccagt acgccttcca
     2881 cctggagcgg gactggagcg agaccgccat ccgggaggcg cagggatcgc ccagcccgct
     2941 gctcgagctg gcgcggcggg cggcgctcgt ggtgaccgac tatttcccca cgttcctggt
     3001 cccccgcgag acggcgacgc tccgcgccca ggtgcggaca ccggtcgtcg cggtggactc
     3061 ggcgaccgtg gttccggtgc gctatcacga gcgcgagtat ctcacggccc ctccgttccg
     3121 cgcccggctg gcgtcggcgc tgccccacta cctggaccgc gctcccgcgc ccgagccgaa
     3181 ggtgcggcgg agactggatc tgccgttcga gccgacgctc ccgtaccacg gcagcattcc
     3241 ggcgctggtc gcctcctgcg acatcgatca cgcggtaccg ccggtgcccg ggatgcccgg
     3301 cggaacacgc gcggcccgcc tcaggctgga ggggttcctg cggcacgggc ttccccgcta
     3361 tgcggaggat cggggcgacc ccaacgcggg cgtcaccagc gggctttccc cctacctcca
     3421 cttcggcaac atctcgcccc gggaagtcgt gcgccgggcc cgcgaggcgg ggcccggcga
     3481 tcaggtcgcc aagttcgagg acgagatcct gacctggcgg gagctggcgt tcaacttcac
     3541 ccacttcaac cgccagcacc ggacggtggc ggcgattccg gagtgggcca gggaagagct
     3601 gaggaagggt gaggccgacg ttcggcccgc gctctactcc cccgaggacc tggaacaggc
     3661 ccggaccggg gagccgctct ggaatgccgc gcagcgcgcg tacctgcgcg acggctggat
     3721 gccgaacccg ctgcggatgc tgtgggggaa gtcggtggtc cagtggaccc ggacggtgcg
     3781 cgaggcgctg gggatcctgg agcacctgaa caacaagtac gcgctggacg ggagggaccc
     3841 cagctcctac ctcaacttcc actggatctt cggacggttc gaccgcccgt tttaccggcg
     3901 gccgatcttc ggtaccgtcc gctccatgtc gctccgggcg gcggagcgga agttcgacgt
     3961 gcggcgggtg gtgctgcgct acgcctgact cggcggcgcc tccagccgct ccagcgcccg
     4021 gtcgtgcggt cgcgacagca gcagcagcgc ggtgcacgcc cccaccagcg ccatctgcat
     4081 gtcccactgc gtatcccaga cgtcgccctg ggtccccagg aacgcttcgg ccgcctcgcc
     4141 cgtcgcgagc gcggtccaga actcgatcag ctcgtagagc gcgctgaagg cgagacagaa
     4201 gcacaccacc acgaagggga gccaccggct gccggccagc ggcgaccggc ggatgaatac
     4261 ctcgcgggcc agcatcgcgg ggacgaagcc ctgcgcgaag tgaccgatcc ggtcgtagtg
     4321 gttgcgggcg aagccgaagg tttcctggag ccagaatccc aggggcacct cggcgtaggt
     4381 gtatttgccg ccgaccatca ggatgacggc atggatccag agcagggtgt agaccagtcg
     4441 ggtgaggcgg aggcggggcc ggagcaggat cagcatgggc gcgccgatca gcaccggggc
     4501 cacctcgagg agccaggtga accggtcgtg cggctcgatg cccgaccaga cgagcacggc
     4561 ggcggctgat atcaggagcg caagctcgta cacggatccc ctggtgtcat cctgagcgaa
     4621 gcgaaggagc cgaacccccg ttactccgca aacggcacgt ccaccgtcag cccgtcgcgc
     4681 gccacgaccg tctccggaaa gatcgcccgc gcctccgcca gcagctcggg cgcgtcccgg
     4741 gtataccgcg gactgatgtg ggtgagcacc agccggcgca cgcccgcttc caccgccact
     4801 cgcgcggcct ccgccgcggt cgagtggccg gtctccttgg cccgctccag ctcgtcgctg
     4861 ccgaaggtgg cctcgtggat caggaggtcg gcgccccgcg ccgcctcgac caccgcgagg
     4921 ctcggccggg tgtcgccggt atagaccagg gttcggccgc gccgcgggga tcccacgagg
     4981 tcggagggag cgacgctccg cccgtcctcc agcacgatcg tctcgccctt atggagccgc
     5041 ccccagagcg gcccctccgg cacgcccagc tcgcgggccc gatccggatt gaaccggccg
     5101 agcctggtgt gctccgccac cgcgaagccg acggtgtccg gccgatgctc ggtctcgaag
     5161 accacgatgt cgtactgctc ccgcgggagc cggtcgcccg gtccgacctc atggatctcc
     5221 accgggaact tgttgcgctc gatgccgagg gagatcgcgg cgccgaggac gcgctgcgcg
     5281 ccgcgcgggc catagagggt cacgggcgcc gtgcggtcct gcagtcccat cgtccgcagc
     5341 aggccggtga cgccgaggat gtg
//
LOCUS       DASUYN010000422         2977 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1894792, whole genome shotgun sequence.
ACCESSION   DASUYN010000422 DASUYN010000000
VERSION     DASUYN010000422.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2977)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2977)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2977
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1894792"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1050)
                     /locus_tag="VF061_08290"
     CDS             complement(<1..1050)
                     /locus_tag="VF061_08290"
                     /inference="COORDINATES: protein motif:HMM:NF013468.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sua5/YciO/YrdC/YwlC family protein"
                     /protein_id="HEX6669540.1"
                     /translation="MTSACTVRVRGVVQGVGFRPFVYRLARANTLAGWVLNGEEGVEI
                     RLEGAREAVDAFLRELRADAPPAASITGIEVAAAEPSGLREFVIRTSRRHDALSTPIA
                     PDLAVCARCLAELFDPRDRRYRYPFINCTDCGPRYSIVTRLPYDRPGTTMAAWSMDPA
                     CAREYADPRSRRFHAQPIACPACGPGVALLETGESAAEPEEPIARAAALLRDGAILAV
                     KGLGGYHLACDARNPRAVGALRERKFRKEKPFALMVRDLATARALVRLPLEAEAALAG
                     PAAPIVLAPARVTLEQVAPATDELGVMLPYTPLHHLLFAAGAPDVLVMTSGNRSSEPI
                     VCDDGEARERLAGLAD"
     gene            complement(1055..1288)
                     /locus_tag="VF061_08295"
     CDS             complement(1055..1288)
                     /locus_tag="VF061_08295"
                     /inference="COORDINATES: protein motif:HMM:NF024809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Uxx-star family glutaredoxin-like
                     (seleno)protein"
                     /protein_id="HEX6669541.1"
                     /translation="MKRVELYGTLDCPYTRDMREWLELRGTEFVEYDVERDRAARERL
                     RALAGQQRTVPVLVEDGTVVQIGWQGRGCTISG"
     gene            complement(1275..2459)
                     /locus_tag="VF061_08300"
     CDS             complement(1275..2459)
                     /locus_tag="VF061_08300"
                     /inference="COORDINATES: protein motif:HMM:NF024969.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HEX6669542.1"
                     /translation="MPVTLELANRVEERLLCRNPAGERFFAREAPRLAAACREMADRF
                     LRGGRLLAFGRGPYATDAQHVSVEFVHPVIVGKRALPALDLSLRFDPWLDALVRSDDM
                     VMGFGPPEGDADVTRALGRAGRRGAMTFALPGAEGSYAIAAADPDPFIHQELIEILYH
                     TLWETVHVFFEHRELGHEVGQAGFLYPFLGREKQDSAELVGQVEASILMKVADDASLR
                     AKVGREEAEAIAGATLAMRDRLRQGGKLLLFGNGGSATDANDWALDCVAPPAGLPPVP
                     AVSLAVEPATVSAIANDVGIEVVFLRQLIAHAEPGDVAVAISTSGGSRNVIAALGEAR
                     KRHLLTVALLGYDGGEIRRQGLADHCIVVGSDYIPRIQEVQASIYHVMRELWGAPEHE
                     AG"
     gene            complement(2468..>2977)
                     /locus_tag="VF061_08305"
     CDS             complement(2468..>2977)
                     /locus_tag="VF061_08305"
                     /inference="COORDINATES: protein motif:HMM:NF014788.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AIR synthase-related protein"
                     /protein_id="HEX6669543.1"
                     /translation="LSGPIGDHGITILLARGELDLEADLRSDTRSLFPLVDALAAAAA
                     PAIRWMRDPTRGGVATSLNELALDSGLGVHISEEAIPVRDEVRGACELLGLDPLHIAN
                     EGQLLAVIGPELADRALDALRATPGGGGAAIIGEIREEPRGAVLACSGYGGTRIVDML
                     VGDPLPRIC"
BASE COUNT          405 a         1121 c         1063 g          388 t
ORIGIN      
        1 gtcggccagt cccgccagcc gctcgcgggc ctcgccgtcg tcgcagacga tcggctcgct
       61 cgagcggttc ccgctggtca tcaccagcac gtcgggcgca cccgcggcga agagcaggtg
      121 gtgcaggggg gtgtagggga gcatcacgcc cagctcgtcg gtggcgggcg cgacctgctc
      181 gagcgtcact ctggcgggcg cgaggacgat cggcgcggcg gggccggcga gcgcggcctc
      241 ggcctcgagc ggcagccgga ccagggcgcg cgcggtcgcc aggtcccgca ccatcagggc
      301 gaacggcttc tccttccgga acttccgctc ccggagggcg ccgaccgcgc gcgggttcct
      361 ggcgtcgcag gccaggtggt acccgccgag tcccttcacg gcgaggatcg cgccgtcgcg
      421 gagcagggcc gcggcgcggg cgatgggctc ctcgggctcg gcggcggact cgccggtctc
      481 cagcagcgcc acgccgggcc cgcatgccgg gcacgcgatc ggctgggcgt ggaaccggcg
      541 gctccgagga tcggcgtact cccgcgcgca cgccgggtcc atgctccacg cggccatggt
      601 cgttccggga cggtcgtagg gcagccgggt gacgatcgag tagcggggac cgcagtcggt
      661 gcagttgatg aacgggtagc ggtatcgccg gtcgcggggg tcgaacagct ccgccaggca
      721 ccgggcgcag acggcgagat cgggcgcgat cggcgtgctg agcgcatcgt gacgccggct
      781 ggtccggatg acgaactccc gcagcccgct gggctccgcc gccgcgacct cgatgccggt
      841 gatgctcgcc gccggcgggg catcggcgcg cagctcgcgc agaaacgcgt ccacggcctc
      901 gcgggcaccc tccagccgga tctccacccc ttcttccccg ttgagcaccc agcccgccag
      961 ggtgttggcc cgcgcgagcc ggtagacgaa gggccggaac ccgacgccct gcaccacgcc
     1021 gcgcacccgg accgtgcacg cgctcgtcat cggtctaccc gctgatggta cagccgcgcc
     1081 cctgccagcc gatctgcacc accgtgccgt cctcgaccag gaccgggacc gtgcgctgct
     1141 gcccggccag cgcccgcagc cgctcccgtg cggcgcggtc gcgctccacg tcgtactcga
     1201 cgaactcggt gccgcgcagc tccagccatt cgcgcatgtc cctggtgtac ggacagtcca
     1261 gcgttccgta gagctcaacc cgcttcatgc tccggtgctc cccatagctc tcgcatgacg
     1321 tggtaaatcg aggcctggac ctcctggatc cgcgggatgt agtccgagcc gaccacgatg
     1381 cagtggtcgg ccagcccctg gcgccggatc tcgccgccgt catagcccag cagcgccacc
     1441 gtgagcaggt gccgcttccg cgcctcgccc agcgccgcga tcacgttgcg ggagccgccg
     1501 ctggtcgaga tggcgacggc cacgtcgccg ggctcggcgt gcgcgatcag ctgccggagg
     1561 aagacgacct cgatgcccac gtcgttggcg atcgcgctga ccgtcgccgg ctccaccgcc
     1621 agcgagaccg cgggcacggg cgggagtccg gccggcgggg ccacgcagtc cagggcccag
     1681 tcgttcgcgt cggtggcgga gccgccgttt ccgaagagca ggagcttgcc gccctggcgg
     1741 aggcgatccc gcatcgccag cgtggccccg gcgatcgcct ccgcttcctc ccgccccacc
     1801 ttggcgcgga gcgacgcgtc gtccgccacc ttcatcagga tcgaggcctc cacctggccg
     1861 acgagctccg cggagtcctg tttctcccgg ccaaggaagg ggtagaggaa gcccgcctgg
     1921 cccacctcgt gccccagctc ccggtgctcg aagaagacgt ggaccgtctc ccagagcgtg
     1981 tggtagagga tctcgatcag ctcctggtgg atgaacggat cgggatccgc cgccgcgatg
     2041 gcatacgacc cctcggctcc gggaagcgcg aaggtcatgg ctccccggcg gccggcgcgg
     2101 cccagcgccc gggtcacgtc ggcatcgccc tccggagggc cgaaccccat caccatgtcg
     2161 tcggaccgca ccagcgcgtc cagccagggg tcgaaccgca ggctcaggtc gagcgcgggc
     2221 agcgcccgct tgccgacgat taccgggtgc acgaactcca ccgagacgtg ctgcgcgtcg
     2281 gtggcatagg gaccgcgccc gaacgccagc agccgcccgc cgcggaggaa ccggtccgcc
     2341 atctcccggc aggccgccgc gagccgcggg gcctcgcggg cgaagaagcg ctcgcctgcc
     2401 gggttccggc agagaaggcg ttcctccacc cggttcgcga gctccagagt gaccggcatg
     2461 cgccgcccta gcagatgcgc gggagcgggt cgcccaccag catgtccacg atccgggtcc
     2521 ccccgtagcc gctgcacgcc agcacggcgc cccgcggctc ctcgcggatc tcgccgatga
     2581 tcgcggcgcc gccgcctccg ggcgtcgccc ggagcgcgtc cagcgcgcgg tccgccagct
     2641 cgggcccgat caccgcgagc agctggcctt cgttggcgat gtggagcgga tccagcccga
     2701 gcagctcgca ggccccgcga acctcgtcgc gcaccgggat cgcctcctcg ctgatatgaa
     2761 ccccgaggcc gctgtccagg gcgagctcgt tgagcgaggt ggcgacgccg ccgcgggtgg
     2821 gatcccgcat ccagcgaatg gccggcgcgg cggcggccgc gagggcgtcc accaggggga
     2881 acaaggatcg ggtgtcggag cgcaggtccg cctcgaggtc cagctccccc cgcgccagca
     2941 ggatggtgat cccgtgatcg ccgatcggtc cggagag
//
LOCUS       DASUYN010000423         5790 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1233715, whole genome shotgun sequence.
ACCESSION   DASUYN010000423 DASUYN010000000
VERSION     DASUYN010000423.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5790)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5790)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5790
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1233715"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..399)
                     /locus_tag="VF061_08310"
     CDS             complement(<1..399)
                     /locus_tag="VF061_08310"
                     /inference="COORDINATES: protein motif:HMM:NF012610.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HEX6669544.1"
                     /translation="MTTLHLPFDRASGRPIHRQIYDGMRRAILDGVLAPGQRVPSTRA
                     LAADLAVSRLPVLTAYDQLLHEGYLEGRPGSGTFVSGAIPDDLLSPPPVRGGRAGVRK
                     ARREPRRPPAVRDEGGLGPFRMSLPALDQFP"
     gene            458..1024
                     /locus_tag="VF061_08315"
     CDS             458..1024
                     /locus_tag="VF061_08315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669545.1"
                     /translation="MLCGGLALAIPAQPMLGQSAAERRDGSRDFDFEIGTWRTHLRRL
                     VHPLTGSTEWVEYEGTTVVRKVWNGRANLVELDVSGPAGRIEALSLRLYNPDAGQWSL
                     NFASSRSGTLATPSVGEFREGSGEFYSHETLDGRAILVRFVISPITADSCRFEQAFSE
                     DGGRTWEINWLATDTRVRATGRAAGSVR"
     gene            1125..3248
                     /locus_tag="VF061_08320"
     CDS             1125..3248
                     /locus_tag="VF061_08320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016624 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEX6669546.1"
                     /translation="MATRTSRARASARLEKADLLDIYKTMLLARRIDDKEIQLKRQNK
                     IFFQISGAGHEAILAAAGKVLRPAHDWFYLYYRDRALCLGLGMTATEQLLSAVGAADD
                     PNSGGRQMPSHWGHKDLNIVSASSPTGTQFLQAVGAAEAWLRYTEIEGIEGRDEAIKH
                     DEVVLCTTGDGTTSEGEFWEALSTACNLKLPVVFLVEDNGYAISVPVEVNTPGGSISK
                     LLTGFPGLFIQEVDGCDVLASFDTMAKAVDYARARKGPALVHAHVIRPYSHSLSDDEV
                     QYRTPAEREADAARDPLVRFPKHLLEQGIATQAELDLIVRQVEEEVQVAAEVALASPQ
                     PPTDSVYRYVYSPDVDPTSEQFDTEDDPRFAGDPTTMVDLLNICLRDEMARDPRILIF
                     GEDVADCSREEALGEVKGKGGVFKVTWGLQRHFGSERVYNSPLAEANIIGRAIGLATR
                     GLKPVVEIQFFDYIWPAYMQLRNELALMRWRSNNAFASPVVVRVTYGGYLKGGSVYHS
                     QTGAAVFTGVPGLRVVCPSTALDANGLLRTAIRCDDPVLFLEHKHLYRQTYNKAPNPG
                     PNFMIPLGKAKVVRPGSDLTIITYGALVQRSLWAAKEAEEKLGVSAEVIDLRSLSPVD
                     WEAIGESVRKTNRAIVAYEDSLSWGYGAEISARIAQDHFAWLDAPVKRVASADTFVAY
                     APELEDVILPQVADLRAAIEEVAAF"
     gene            complement(3267..3773)
                     /locus_tag="VF061_08325"
     CDS             complement(3267..3773)
                     /locus_tag="VF061_08325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669547.1"
                     /translation="MAGAQSDADLKTVSATVLTMPKYKQYLDATVSLANLAAKNPGVA
                     GRMKDSGEKSIAEQVRLLDSDPQLKGAIAATGLTTKDYVTTQWALLQTGMAYAMTKGS
                     GASQDEVAQKAGVSKANLDFYAKNEAEINRLAKEAQARAPQAPDDDDDADGADDDYDD
                     SGEDDPDQ"
     gene            4374..4946
                     /locus_tag="VF061_08330"
     CDS             4374..4946
                     /locus_tag="VF061_08330"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HEX6669548.1"
                     /translation="MSMPESEQHLSLALEAAVARFGNMVRQVGRRYRLDESGLDEVMQ
                     EVRIRLWRARGTSEQVGETNTSYVYRTASSAALDVLRRRRARQAERHDTIDGDDAVAT
                     LTASNPDPHAALEGSELADRVARAIDEIPASRRPAVRMHLAGYPRQEIATLMGWTEAK
                     TRNLLYRGLADLRERLTAEGIGWNPAGETT"
     gene            4943..5569
                     /locus_tag="VF061_08335"
     CDS             4943..5569
                     /locus_tag="VF061_08335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669549.1"
                     /translation="MNDEQLREVYGGIMARGRGRVPTCPAPEAILELVRREGAEEARL
                     ATLDHVMSCADCRSEFDLVRSIELAGAAAGATARPGRRWMAPLALAASVLLAVVVGRY
                     VLPGTREPDLVRSGPDERVTLLAPSPQAATGSPLLFAWHPIGDAERYRLEVLNAAGEV
                     MLEAETADTAILLQSAADLQPGDYQWWVGATGPGAARSELRPLRLTAQ"
     gene            complement(5494..>5790)
                     /locus_tag="VF061_08340"
     CDS             complement(5494..>5790)
                     /locus_tag="VF061_08340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669550.1"
                     /translation="VADLYDGLARGLTVTEALREAKLAALGRGAPPGEWAGFSVVGDP
                     LATVALVPPAHAPLGLRLAAGLLLGLGAGGYWAVRRRGRSSERAAPGPVAPTHH"
BASE COUNT          881 a         2052 c         2016 g          841 t
ORIGIN      
        1 gggaaactgg tccagcgccg gcaggctcat gcggaaagga ccgagccctc cctcgtcccg
       61 tacggccggc ggccggcgcg gctcccgccg ggccttgcgg accccggccc ggccgccgcg
      121 gaccggaggc gggctgagca gatcgtccgg aatcgcgccg ctgacgaagg tacccgagcc
      181 gggccgaccc tccaggtagc cctcgtgcag cagctggtcg taggccgtga gcaccggcag
      241 gcgcgacaca gcgaggtccg ccgccagcgc gcgggtggag ggcacgcgct ggccgggagc
      301 gagcacgccg tcgaggatcg cccgccgcat accgtcgtag atctgccggt ggatcgggcg
      361 gccggaagca cgatcgaaag ggaggtgtaa agtggtcatg ggaaaaatat acagatcggg
      421 ttcagtggca gtaccagcgg gatggtggcg attcggtatg ctgtgtggcg gtctggcgct
      481 ggccatcccg gcccagccga tgctggggca gtcggccgcg gagcggcgcg acggcagccg
      541 tgacttcgac ttcgagatcg gcacctggag gacccacctg cggcggttgg tccaccccct
      601 cacgggctcc accgaatggg tcgagtacga gggcacgacc gtcgtgcgca aggtctggaa
      661 cggccgcgcc aacctggtgg agctcgacgt cagcgggccc gcgggccgga tcgaggcgct
      721 cagtctccgg ctctacaatc ccgatgccgg gcagtggagc ctcaacttcg ccagcagtcg
      781 gtccggcacc ctggccaccc cgtccgtcgg cgaattccgg gaggggagcg gcgagttcta
      841 ctcccacgag acgctcgacg gccgagccat cctggtgcga ttcgtcatct cgcccatcac
      901 ggcggattcg tgccggttcg agcaggcttt ctcggaggac ggggggcgga cgtgggagat
      961 caactggctc gcgacggata cgcgggtaag ggcgacgggc cgggcggccg ggagcgtccg
     1021 ttagcgcctc gaccctcccg gggcacaggt ccccgggccg ggccaccggc gctatcttac
     1081 gtcccgacga ccaccgccga cccgagcccc gaacccggac cgacatggcc acgagaacca
     1141 gccgcgcccg cgcctccgcg agactcgaaa aggccgacct gctcgatatc tacaagacga
     1201 tgctgctggc ccgccggatc gatgacaagg agatccagct caagcggcag aacaagatct
     1261 tcttccagat cagcggtgcc ggccacgagg ccatcctcgc cgccgccggc aaggtcctcc
     1321 gcccggccca cgactggttc tatctctact accgcgaccg cgcgctctgc ctcggtctcg
     1381 gcatgacggc gaccgagcag ctcctgtccg ccgtcggcgc tgccgacgac cccaactccg
     1441 gcggccgcca gatgccgtcc cactggggcc acaaggacct caacatcgtc agcgcttcca
     1501 gccccaccgg cacccagttc ctccaggccg tgggcgccgc cgaggcctgg ctccggtaca
     1561 ccgagatcga gggcatcgag gggcgcgacg aggcgatcaa gcacgacgag gtcgtcctct
     1621 gcaccaccgg cgacgggacc accagcgagg gcgagttctg ggaggccctc agcacggcct
     1681 gcaacctcaa gctcccggtg gtcttcctgg tcgaggacaa cggctatgcc atctcggttc
     1741 cggtcgaggt caacaccccc ggcggctcga tctcgaaact cctgaccggc ttccccggcc
     1801 tcttcatcca ggaggtggac ggctgcgacg tgctcgcctc cttcgacacc atggcgaagg
     1861 cggtggacta cgcccgcgcc cgcaaggggc cggcgctggt gcacgcgcac gtgatccggc
     1921 cctacagcca ctcgctgtcg gacgacgagg tgcagtatcg cacccccgcg gagcgcgagg
     1981 ccgacgccgc gcgggacccc ctggtgcgct tcccgaagca tctgctggag caggggatcg
     2041 ccacccaggc cgagctcgac ctcatcgtgc gccaagtgga ggaggaagtg caggtggcgg
     2101 ccgaggtcgc cctcgcctcg ccccagccgc caacggactc ggtctaccgg tacgtctact
     2161 cgccggacgt ggaccccacc tcggagcagt tcgataccga ggacgacccg cggttcgccg
     2221 gtgaccccac caccatggtg gacctgctca acatctgtct ccgcgacgag atggcgcggg
     2281 acccgaggat cctgatcttc ggggaggacg tggccgactg cagccgtgag gaggcgctgg
     2341 gcgaggtcaa ggggaagggc ggggtcttca aggtgacctg gggtctgcag cgccacttcg
     2401 ggagcgagcg ggtctacaac tcaccgctcg cggaggccaa catcatcggc cgcgcgatcg
     2461 gcctcgcgac ccgtggcctc aagccggtgg tcgagatcca gttcttcgac tacatctggc
     2521 cggcgtacat gcagctccgg aacgagctcg cgctgatgcg ctggcggtcg aacaacgcct
     2581 tcgcgtcgcc ggtcgtggtg cgggtgacgt acggcgggta cctgaaaggc ggctcggtct
     2641 atcacagcca gaccggcgcc gcggtcttca ccggcgtccc gggcctgcgc gtcgtctgcc
     2701 cctcgaccgc gctggacgcg aacggtctcc tccgcaccgc gatccgctgc gacgacccgg
     2761 tgctgttcct cgagcacaag cacctctacc gccagaccta caacaaggcg ccgaacccgg
     2821 gcccgaactt catgatcccg ctcggcaagg cgaaggtcgt ccgccccggc agcgacctca
     2881 ccatcatcac ctacggcgcc ctggtgcagc gctcgctctg ggctgcgaag gaggcggagg
     2941 agaagctcgg cgtgagcgcg gaggtcatcg atctgcgctc gctgtcgccg gtggactggg
     3001 aggcgatcgg cgagtcggtc cggaagacga accgcgcgat cgtcgcgtac gaggattcgc
     3061 tgtcgtgggg ctacggcgcc gagatctcgg cccggatcgc ccaggaccac ttcgcctggc
     3121 tggacgcccc ggtcaagcgc gtcgcgtccg ccgacacctt cgtcgcctac gcgcccgagc
     3181 tggaggatgt gatcctgccc caggtggcgg atctccgggc cgcgatcgag gaggtcgcgg
     3241 ccttctagaa cgaagccggc tccgacctac tggtccggat cgtcctcccc cgaatcgtcg
     3301 tagtcgtcgt ccgccccgtc agcgtcatca tcgtcatcgg gcgcctgcgg cgcccgggcc
     3361 tgcgcttcct tcgccagccg gttgatctcc gcctcgttct tcgcgtagaa gtcgaggttg
     3421 gccttgctca cgccggcctt ctgggcgacc tcgtcctggg acgcgccgct ccccttggtc
     3481 atggcgtacg ccatgccggt ctggagcagc gcccactggg tcgtcacata gtccttcgtg
     3541 gtgaggccgg tcgccgcgat ggcgcccttc agctgcgggt cgctgtcgag gagccggacc
     3601 tgctcggcga tggacttctc gccgctgtct ttcatccggc ccgcgacgcc cgggttcttg
     3661 gccgccaggt tggccaggct caccgtggcg tcgaggtact gcttgtactt gggcatggtg
     3721 aggacggtgg cggagacggt cttgagatcc gcgtccgact gtgccccggc catggccggg
     3781 agggacagcg acaggaccgc gaccgcgtgc gcacacactc gtctgcttgg gctcgacatc
     3841 tcgataatgc tccgcgcggg ggaaccgggg acgacagggg aggaactcta gcggagaagg
     3901 gacgcgagcg aaaccgggga cctcacgtgc cggtggtccc cggcgcctga acggctcgcg
     3961 gcggtcgtgc cgctgggttc cggaagcgct ccttagtggc tgctcttgcc tgcaggcgct
     4021 tgccggagtg gatcgacctt caacttgtgt tggcgcgctg aaatactcgg tccatacgcg
     4081 ggcgttcgct tcgggggtac cctgacctgg gcggacgccg caaaaccctc cttccatcag
     4141 gcgtgcacca catcactagg gcccgggacg cggactgtca acccgaagaa tctgcccggt
     4201 cgccgggaac ctgggggcgg acggaagcgc ggcgaatgca tatccgcacc acgacaccgt
     4261 acgcgacgcc ggctccggcg gctggtgcgc accgatccgc gggcgcgacg ttggtgtggc
     4321 tccccggcga gaccggggtg cccgcggggc acggtcggga tacattcgac cgcatgtcta
     4381 tgcccgaaag cgagcagcac ctttcacttg ccctcgaggc ggccgtcgcc aggttcggca
     4441 acatggtccg ccaggtgggc cgacggtacc gtctggatga gagcgggctg gacgaagtga
     4501 tgcaggaggt tcggatccga ctctggcggg cgagaggaac gagtgagcag gtcggcgaga
     4561 ccaacacgtc ttatgtgtat cgcaccgctt cgtcggcggc cctcgatgtg ctccggcgcc
     4621 ggcgggcccg ccaggcagag cgccacgaca cgatcgacgg ggacgacgcc gtggccaccc
     4681 tgaccgcctc gaatcccgac cctcacgccg cactcgaggg ctccgaactc gccgaccggg
     4741 tggcccgtgc gatcgacgag attcccgcct ccaggcggcc ggcggtgcgg atgcacctgg
     4801 cgggctaccc ccgccaggag atcgccacgc tgatggggtg gaccgaggcc aagacccgca
     4861 atctcctgta ccgcggactg gccgacctca gggagcggct gaccgcggag gggatcggat
     4921 ggaacccggc gggagagacc acgtgaacga cgagcagctg cgggaggtct acggcggcat
     4981 catggcccgc ggacgcggcc gggtgccaac gtgccccgcg ccggaggcca tcctggagct
     5041 ggtccgccgc gagggcgcgg aggaggcacg gctcgccacc ctcgatcatg tcatgagctg
     5101 cgccgactgc cgctcggagt tcgacctggt ccggagcatc gagctcgccg gcgccgcggc
     5161 cggggccacc gcccgcccgg gccgccgctg gatggcgccg ctggcgctgg ccgcctcggt
     5221 gctgctggcg gtcgtggtcg gccgctacgt gctgcccggc acgcgcgagc cggacctggt
     5281 ccggtcgggc ccggatgagc gggtgacgct gctcgcgccg tcgcctcagg ccgccaccgg
     5341 gtcgccgctg ctcttcgcat ggcacccgat cggcgatgcc gagcgctacc ggctcgaggt
     5401 gttgaatgcg gcgggtgagg tgatgctgga ggcggagacc gcggacactg cgatcctgct
     5461 ccagagcgcc gccgatctcc agccgggcga ctatcagtgg tgggtcggcg ccaccgggcc
     5521 gggcgccgcg cgctcggagc tgcgccctct ccgtctcacc gcccagtaac cgccggcgcc
     5581 gagccccagc agcaggcccg ctgccaggcg gagccccagc ggcgcatgcg ccggcggcac
     5641 cagcgccacc gtggccagcg ggtcaccgac gacgctgaac cccgcccact cgcccggcgg
     5701 cgcgccccgc ccgagcgccg ccagcttggc ttcacgcagc gcctccgtca ccgtcaaacc
     5761 ccgcgccagc ccgtcgtaga ggtccgccac
//
LOCUS       DASUYN010000424         3865 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1013555, whole genome shotgun sequence.
ACCESSION   DASUYN010000424 DASUYN010000000
VERSION     DASUYN010000424.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3865)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3865)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3865
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1013555"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            114..500
                     /locus_tag="VF061_08345"
     CDS             114..500
                     /locus_tag="VF061_08345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669551.1"
                     /translation="MYLVEIESGREQLYPSVEALAAAIRDGVIGPDSRIFHRASSSWV
                     SIMVHPEYRKAMAARAQEPLPPLARNQWTFFGTQAAGRQADETTEIQDSPPAQVEPVR
                     RRSLRSLFRLGRRRSSSPDTADSSDS"
     gene            608..1495
                     /locus_tag="VF061_08350"
     CDS             608..1495
                     /locus_tag="VF061_08350"
                     /EC_number="3.4.15.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR02069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0009057 - macromolecule catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyanophycinase"
                     /protein_id="HEX6669552.1"
                     /translation="MPGRIGRLSFLAAAVLAAAGALPPLSPERPRGSLLIVGGGDRPE
                     TVMRRFVELAGGRGARIAVVPIASADPKETGRGLAAELHGLGARAFVYHLDRARDHGG
                     PVVRDLDSVTGIWFTGGDQSRVTTALAGSPALRAMHRRYREGAVVGGTSAGAALMSDS
                     MITGQQTPPGDTTGYYGDEYPTITRRRVEITPGLGFLPEAIVDQHFIRRERHNRLMSA
                     VLERPTLLGVGIDEGTALEVGPDGRWRVLGVSAVVIYDARRARVTGRGRTLLGAVGLR
                     VHVLPAGAVFDPTSGVGSL"
     gene            1576..2019
                     /locus_tag="VF061_08355"
     CDS             1576..2019
                     /locus_tag="VF061_08355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669553.1"
                     /translation="MTEFLVAVRPGLELVYRTPFALRAAMRRGEITPDSRIYHRAASR
                     WISITEHPEYRKFLAERHPPDWLEPIPFDPVPPPVEAPNRAAAGLRRALGWMLSRIRT
                     AMTRLAAAGRPRRRRSLAGARHTPPPPAAPHDADSTPPRRWTFLQ"
     gene            2263..>3865
                     /locus_tag="VF061_08360"
     CDS             2263..>3865
                     /locus_tag="VF061_08360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669554.1"
                     /translation="MLDRDLSDLLVEFSLALGHQAAYPEGHPVLAAASQRLTHAVVGV
                     LAGRPSLTLGIARRQFVIDGVLTDPRNGLLGNLAHRLHRHRAAAIRFDRGITQADISG
                     LLAALACDPRREPGPLGLRPEGERRWPHAEVYPAPYDRLELAEGTDADADADRDTGTR
                     ELQLWLELARAALPEETGADVGGSSHPGVIAAAINRRSREVSYDEAVVGYLMRVAEEV
                     AVGETVEQAWLRRRLSRLIASLEPEALERLLQVGIGEPYRKRFVSAASQTLGADAVLR
                     VVHAAAESAGRGISDNLMLLLRKLAQHAESDAPEIAENADAALRDNVDRLVAGWELED
                     PNPDAYSSALQGMAKATEAREPSGALPQFELDAADLVRTGLEIGETGPRVQAAAAGLA
                     ASGRTRLLTELLATAAQAGLGTDAVWSGFATVELLAAELARQPVDFGVVEALVSRLKE
                     AAGEPLLDALESSQDRSTRWNLLRILGEVGTTIAPAVAARLPHSPWYVQRNLLLLLGR
                     LGSWPEGFSPTDYLTHPDPRVRREAY"
BASE COUNT          529 a         1421 c         1359 g          556 t
ORIGIN      
        1 ccggcgagcc ggctcgactc cggtgcagct attggctcgg atcatgcgtt gcccgtggtc
       61 gtccataacg accctgcacc ggtcgccacg gcactccatc gggaaccctc tccatgtatc
      121 tggtcgagat cgagtcgggt cgggagcagc tctacccgtc ggtcgaagcg ctggccgcgg
      181 ccatccgcga cggcgtgatc gggccggact cgcggatctt ccatcgagcc tcctcgagct
      241 gggtgtccat catggtccat ccggaatacc ggaaggcgat ggccgcccgc gcgcaggagc
      301 cactgccgcc cctggctcgc aaccagtgga ccttcttcgg cacgcaggcg gcggggcggc
      361 aggcggacga gaccaccgag atccaggaca gcccgcccgc ccaagtcgag ccggtccgcc
      421 gacgcagtct gcgctcgctc ttcaggctcg gacgccggag atcctcctcg ccggacaccg
      481 ccgactcgtc ggactcctga tccaccacca tcaccggtga catcacgcgc cgcggcttga
      541 cagctccggc cggggctcga acattggcca ccggagcgac gtcgtcgcca tgggagtggg
      601 aggctcgatg cccggcagaa ttggccgact ttcgttcctc gcggcggcgg tccttgccgc
      661 cgccggtgcc cttcctccgc tttcccccga acggcctcgc ggttcgttgc tgatcgtcgg
      721 cggcggcgat cgcccggaga ccgtgatgcg ccggttcgtc gagctcgccg gggggcgtgg
      781 tgcccggatc gccgtggtgc cgatcgccag cgcggacccg aaggagaccg ggcgcgggct
      841 ggccgccgag cttcacggtc tcggtgctcg ggcgttcgtg taccacctgg accgggcccg
      901 agaccacggc ggtcctgtcg tccgcgacct cgactcagtc accggcatct ggttcaccgg
      961 cggcgatcag tcccgggtga ccacggcgct ggcaggcagc ccggcgctcc gggcgatgca
     1021 ccggcgctac cgggaggggg ccgtggtcgg cgggacttcc gccggcgcgg cgctcatgtc
     1081 ggactccatg atcacaggcc agcagacacc gcccggcgac accaccgggt attacggcga
     1141 cgagtatccc accatcaccc ggcggcgggt cgagattacg cccggcctcg gtttcctgcc
     1201 ggaggcgatc gtggaccagc acttcatccg ccgggagcgg cacaaccggc tgatgagcgc
     1261 cgtcctcgaa cggccgaccc tgctcggcgt cggcatcgac gaggggaccg cgctggaggt
     1321 gggaccggac ggtcgctggc gggtgctggg cgtgagcgcg gtggtgatct atgacgcgcg
     1381 gcgggcgcgg gtgaccggcc ggggcaggac gctgctcggg gcggtggggc tgcgggtgca
     1441 cgtgctgccg gcgggggccg tattcgaccc cacgagcggc gtcggcagtc tgtgacttga
     1501 ggagcccggg ccagcgccta gattggcgcc agagaccttc cgctacaccg gccgacccaa
     1561 ttcgaaggaa gcgggatgac cgagtttctg gttgccgtga ggcccgggct ggagctggtg
     1621 tatcgcacac cgttcgccct gcgcgcggcc atgcgcagag gcgagatcac tcctgactcc
     1681 cgcatctatc accgggcggc ttcgcgctgg atctcgatca ccgagcaccc ggagtaccgc
     1741 aagttcctgg cggagcgtca tccgccggac tggctcgaac ccattccctt cgacccggtt
     1801 ccgccgccgg tcgaggcccc caacagggcc gccgccggcc tgaggcgggc actcggctgg
     1861 atgctgagcc ggatacgaac cgccatgacc cggctcgccg cggccggccg gccccgccgc
     1921 cgccgctcct tggcgggtgc caggcacacc cctccgccac cggctgcccc ccacgacgcg
     1981 gattcgacac cgccgcggcg ctggaccttc ctccagtgac gggaaggggg ggctgaacgc
     2041 ccggcacctc gccccggcag atcgcacgac ccacccgatc cccgactccg gccttacatc
     2101 cgaaatccct gatccacagg cacttgcccg ccatcttcac atcggcgcgc ctcttgctct
     2161 ctggcaggcc tctcgcccca gaggccccgc gcgaccatgg ccgccccaga tgccgtccag
     2221 agcgaactcc tcgagcccgg tgcggtccga ggggagcgtc tcatgctcga ccgggacctc
     2281 tcggacctcc tggtggaatt ctcgctcgcg ctgggccacc aggcggccta ccccgagggt
     2341 cacccggtgc tggccgcggc gagccaacgc ctgacgcacg ccgtcgtcgg cgttctggcc
     2401 ggacggcctt ccctcaccct cggcatcgcc cgccgacagt tcgtgatcga cggcgtcctc
     2461 accgatcctc gcaacggcct gctgggaaat ctggcgcacc ggctgcaccg gcaccgggcc
     2521 gccgccatcc gcttcgaccg cgggatcacc caggccgata tctccggtct gctcgccgcg
     2581 ctcgcctgcg atccccgcag ggaaccgggg cccctgggtc tccgtcccga gggcgagcgc
     2641 cgctggccgc acgcggaggt ctaccccgcc ccctacgacc gcctggagct ggcggaaggc
     2701 accgatgctg atgcggacgc cgatcgcgat accggcaccc gggagctgca gctctggctg
     2761 gagctggcca gggcggcact gccggaggag accggcgccg atgtcggcgg cagcagccat
     2821 cccggtgtca tcgccgccgc catcaaccgt cgcagccgcg aggtcagcta cgacgaggcg
     2881 gtcgtcgggt acctgatgcg ggtggcggag gaggtcgccg taggcgagac cgtggagcag
     2941 gcctggctcc gccgccgtct ctctcgcctg atcgcgtccc tcgagcccga ggccctggag
     3001 cggctgctcc aggtcgggat cggcgagccc tatcggaaac ggttcgtctc cgccgcctcg
     3061 cagacgctcg gggcggacgc ggtgctgagg gtggtccatg ccgcggccga gtccgcgggg
     3121 cgcggcatct cggacaacct gatgctgctc ctgcggaaac tggcccagca tgcggagtcc
     3181 gatgcgccgg agatcgccga gaacgccgac gcggctctcc gcgataacgt cgaccggctg
     3241 gtcgccggct gggagctcga ggatcccaat ccggacgcct actcgtccgc cctccagggc
     3301 atggcgaagg cgaccgaagc cagggagccg tcgggagcgc tgccccagtt cgagctcgac
     3361 gcggccgacc tggtgcgcac cgggctcgag atcggcgaga ccgggcctcg ggtgcaggcg
     3421 gccgccgcag ggctggcggc gagcggacgc acgcgcctgc tgacggagct tctggcgacg
     3481 gcggcgcagg cgggcctcgg gaccgacgcc gtctggagcg ggttcgcgac ggtggagctg
     3541 ctcgcggcgg agctggcgcg ccagccggtg gacttcggcg tcgtcgaggc gctggtctca
     3601 cggctgaagg aggcggcggg ggagccgctg ctcgacgcgc tcgaaagctc gcaggaccgc
     3661 tcgacgcgct ggaacctgtt gcgcatcctg ggcgaggtgg gcaccaccat cgcgccggcg
     3721 gtcgccgccc gcctgcccca ctcaccctgg tacgtgcagc ggaaccttct cctcctgctc
     3781 ggaaggctgg ggagctggcc ggagggcttc agtccgacgg actacctcac ccacccggac
     3841 ccgcgggttc ggcgggaggc ctacc
//
LOCUS       DASUYN010000425         3880 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1454217, whole genome shotgun sequence.
ACCESSION   DASUYN010000425 DASUYN010000000
VERSION     DASUYN010000425.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3880)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3880)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3880
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1454217"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(338..727)
                     /gene="queF"
                     /locus_tag="VF061_08365"
     CDS             complement(338..727)
                     /gene="queF"
                     /locus_tag="VF061_08365"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: protein motif:HMM:TIGR03139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033739 - preQ1 synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preQ(1) synthase"
                     /protein_id="HEX6669555.1"
                     /translation="MAIAEGRTIPFVGPEAVDVGVLETFEYAGPDQEIVTETREFSPV
                     CPYSGLPDFATLRITYVPSDRCIELKSLKYYVTSYRNVGIFQEHATAKIAEDLQRVLA
                     AKRLVVTTIYNTRGGFDTTCTVELPAT"
     gene            complement(737..2629)
                     /locus_tag="VF061_08370"
     CDS             complement(737..2629)
                     /locus_tag="VF061_08370"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX6669556.1"
                     /translation="MTDVLVPPSEKPGAPLASEQEAREVAEAAREKDWQAPSFVRSMF
                     EGSFRLDLVHPFPQPDPADLERARPFMERLERFMRERVDSDMIDREGKIPSYLVRGLG
                     EIGAFGIKIPTEYGGLGLSQYSYTRAIGLVTSQDGNLTALLSAAQSIGVPTPLKLFGT
                     PEQKARYLPRLARGAVSAFALTENHVGSDPAGLETTATLSEDGTHYILNGEKLWCTNG
                     TIAELMVVMARTGPKQITAFVVEADWPGVQVVQRLHFMGLKAIENGIIRFTNVRVPVE
                     NVLWGEGKGLKLALITLNTGRLTLPASAVAGSKRALEISRRWAAQRVQWGAPVGKHDA
                     IAQKLGRMAAEIFAMEAVSDLASLLADRGDADIRLEAAMAKMWNTEIGWRIVDDALQI
                     KGGRGYETADSLRSRGERADPIERMMRDYRINLIFEGSSEIMRLFIAREAVDTHLRVA
                     GDIIDPKAPMGRKIKAVLRSGVYYAWWYPKLFLGWSRAPRFAEFGRLAGHVRFVDRST
                     RRLARTLFHCMIRFGPRLEKRQAVLGRLVEIGAELLAMTAACSRARAMTAAQGDGATP
                     VEGREPGPVDLAELFCRHARRRVEERFEAVFDNDDVATYRVAQQVLAGEHGWLERGMV
                     KLPEEG"
     gene            complement(2622..3296)
                     /locus_tag="VF061_08375"
     CDS             complement(2622..3296)
                     /locus_tag="VF061_08375"
                     /inference="COORDINATES: protein motif:HMM:NF037007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX6669557.1"
                     /translation="MATTAERERNPVRTRAAILDAAEKLFAQRGFDATSLSDVGAAAG
                     VSRGTPGYFFGSKAELYQAVLGRCFAEVREAVRAGRARALASGQNPEAILAGAVSDYF
                     DFLAARPHFIRLIEREALSGGPEHDELGHLSAGQEAVAAISAELGLDDSPSGDAAQLL
                     LSIIALCWFHLVHARTVAPAVGVTLEDADDLDRRRRHVVGLVLHGVAGLDRPLTSTLT
                     RSTHHD"
     gene            complement(3410..>3880)
                     /locus_tag="VF061_08380"
     CDS             complement(3410..>3880)
                     /locus_tag="VF061_08380"
                     /inference="COORDINATES: protein motif:HMM:NF013645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669558.1"
                     /translation="GKLFAAGQAGDRFGVRNSGAIAVIEGAGNHCCEYMTSGIVVVLG
                     RAGRNFGAGMSNGVAYVLDETGTFGNRINPDMVELSALEERDVELLHRLVREHEERTA
                     SPRARTILVQWESFLPLFRKVAPKGAEAYVAATRDAYLAVERADMEPALARRSA"
BASE COUNT          554 a         1395 c         1315 g          616 t
ORIGIN      
        1 ccgtgttcat gaaggccgga tcgtacgtca tcaggccgaa gtcgtcgtcc gcgaccttga
       61 tctgtcggag gtcggtggca cgcacggtgc cttccaccac cggcacctcg taggtgcggc
      121 cggtgcgatt gtcggtgatc gtgaggctgt cctgaggcac tgaactgctc ctgggaaagg
      181 cgcgtcggaa ggaagaccgc ggtgcagttt cgagtataac gtgcggcggg gcgcattcgc
      241 cagcaaccac cggggtcgtg tcgccctgaa cgtggcgaag gggcccatgg cgagcatggg
      301 ccccttcgct gcgctcgggg tgacaccgat ccccgggtca ggtcgcgggc aactccacgg
      361 tgcaggtggt gtcgaagcca ccccgcgtat tgtagatcgt cgtcaccacg agccgcttcg
      421 cggccagcac ccgctgcaga tcctcggcga tcttcgccgt cgcgtgctcc tggaagatcc
      481 ccacgttccg gtaactggtg acgtagtact tgaggctctt gagctcgatg caccggtccg
      541 agggcacgta ggtgattcgc agcgtggcga agtccggcag cccgctgtag gggcagaccg
      601 ggctgaactc gcgggtctcg gtcacgatct cctgatcggg tccggcgtac tcgaacgtct
      661 ccagcacgcc gacgtccacc gcttcgggcc ccacgaaggg gatggtcctg ccttctgcga
      721 tcgccatggg cgaatcctag ccctcttccg gcagcttgac catcccacgc tccagccagc
      781 cgtgctcccc cgcgagcacc tgctgggcca cccggtaggt ggccacgtcg tcgttgtcga
      841 acaccgcctc gaatcgctcc tccaccctcc gcctcgcgtg ccggcagaag agctccgcga
      901 ggtccacggg ccccggctcc ctcccctcga cgggcgtcgc gccatccccc tgcgccgccg
      961 tcatcgccct cgcccgcgag cacgccgccg tcatcgccag cagctcggcc ccgatctcca
     1021 ccagccggcc cagcaccgcc tggcgcttct ccaaccgggg gccgaagcgg atcatgcagt
     1081 ggaacagcgt ccgcgccagg cgccgggtcg atcggtccac gaaccgcacg tggcccgcca
     1141 gccggccgaa ctcggcgaac cgtggggccc ggctccagcc caggaacagc ttgggatacc
     1201 accacgcgta gtacacgccc gagcggagca cggccttgat cttccggccc atcggggcct
     1261 tggggtcgat gatgtcgccc gcgacccgca ggtgggtgtc caccgcttcc cgggcgatga
     1321 acagccgcat gatctcgctc gagccctcga agatcaggtt gatccggtag tcccgcatca
     1381 tccgttcgat cggatcggcc cgctctcccc ggctccggag gctgtccgcc gtctcgtagc
     1441 cgcgcccgcc cttgatctgg agcgcgtcgt ccacgatccg ccagccgatt tcggtgttcc
     1501 acatcttggc catcgcggcc tcgagccgga tgtcggcgtc gccccggtcg gcgaggagcg
     1561 acgcgagatc cgacaccgct tccatggcga agatctccgc cgccatccgg cccagcttct
     1621 gcgcgatcgc gtcgtgcttg ccgaccggcg ctccccactg gacccgctgc gccgcccagc
     1681 ggcgcgagat ctccagcgcg cgcttggagc ccgccaccgc ggaggcgggg agggtgagcc
     1741 ggccggtgtt gagggtgatg agcgccagct tgaggccctt gccctcgccc cagagcacgt
     1801 tctccaccgg cacccgcacg ttggtgaagc ggatgatgcc gttctcgatc gccttgagtc
     1861 ccatgaagtg gagccgctgc accacctgca ccccgggcca gtccgcctcc acgacgaagg
     1921 ccgtgatctg cttcggcccg gtccgcgcca tcaccaccat cagctcggcg atggtgccgt
     1981 tggtgcacca gagcttctcg ccgttgagga tgtagtgggt gccgtcctcc gagagcgtgg
     2041 ccgtcgtctc gagaccggcc ggatccgagc cgacgtggtt ctcggtcagc gcgaacgcgg
     2101 acaccgcgcc cctggcgagc cgcggcaggt agcgggcctt ctgctccggc gtgccgaaca
     2161 gcttgagcgg cgtcgggacc ccgatggact gggcggcgga gaggagcgcg gtgaggttcc
     2221 cgtcctgact ggtgaccagg ccgatggcgc gggtgtagct gtactggctc agccccagtc
     2281 cgccgtactc ggtgggaatc ttgatgccga aggcaccgat ctcgcccagc ccgcggacga
     2341 ggtagctcgg gatcttgccc tcccggtcga tcatgtcgct gtccacccgc tcgcgcatga
     2401 accgctcgag tcgctccatg aagggccggg cccgctccag gtcggcggga tccggctgcg
     2461 gaaacggatg caccaggtcc agccggaacg agccctcgaa catggaccgc acgaagctgg
     2521 gcgcctgcca gtccttctcg cgcgcggctt cggcgacctc gcgagcctcc tgctccgagg
     2581 cgagcggcgc gcccggcttc tcgctgggtg ggacgaggac gtcagtcatg atgggtggac
     2641 cgggtgaggg tggaggtcag cgggcgatcc agccccgcca cgccatggag gaccaggccg
     2701 acgacgtgcc gccgtcggcg gtcgagatcg tccgcgtctt ccagcgtcac tcccacggcg
     2761 ggcgcgacgg tgcgggcgtg gaccaggtgg aaccagcaga gggcgatgat gctgaggagg
     2821 agctgcgcgg cgtcccccga gggcgagtcg tcgaggccca gctccgcgct gatcgcggcg
     2881 accgcttcct gccccgcgga gaggtggccc aactcgtcgt gctcgggacc accgctcagc
     2941 gcctcgcgct cgatgagccg gatgaaatgg ggccgggccg cgaggaagtc gaagtaatcg
     3001 gagacggccc cggcgaggat cgcctccggg ttctggccgc tggcgagcgc gcgggcgcgg
     3061 ccggcccgga cggcctcccg aacctcggcg aaacagcggc cgaggaccgc ctgatagagc
     3121 tccgccttgg agccgaagaa gtagccgggc gtcccccggg agaccccggc ggcagcgccg
     3181 acgtcgctca ggctggtggc gtcgaacccc ctctgggcaa acaacttctc tgccgcatcg
     3241 aggatggcgg cgcgggtgcg gaccgggttg cgttcgcgct cggcggtggt ggccatgaga
     3301 gactcctggg ggcttgcttg ctgttcagca agttaagtgg ttgtctccat tggtcaaggg
     3361 gcggtggcca ggatgggccc cttcgcggcg cgcagggtga ccgcccgcgc tacgcgctcc
     3421 tccgcgccag cgcgggctcc atgtcggcgc gctcgacggc caggtacgcg tcccgcgtcg
     3481 ccgccacgta cgcctccgcg cccttcggcg ccactttccg aaacagcggc aggaagcttt
     3541 cccactggac caggatcgtc cgcgcccggg ggctggcggt gcgctcctcg tgctcccgca
     3601 ccagccggtg cagcagctcg acgtcgcgct cctccagcgc gctcagctcc accatgtccg
     3661 ggttgatccg atttccgaag gtgccggtct cgtccagcac gtaggccacc ccgttggaca
     3721 tcccggcgcc gaagttgcgc cccgcgcggc cgaggacgac cacgatcccc gaggtcatgt
     3781 actcgcagca gtggttgccg gcgccttcga tcaccgcgat cgcgcccgag ttccgcaccc
     3841 cgaaccggtc gcccgcctgc ccggcggcga agagctttcc
//
LOCUS       DASUYN010000426         6445 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_571615, whole genome shotgun sequence.
ACCESSION   DASUYN010000426 DASUYN010000000
VERSION     DASUYN010000426.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6445)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6445)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6445
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_571615"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            769..4755
                     /locus_tag="VF061_08385"
     CDS             769..4755
                     /locus_tag="VF061_08385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669559.1"
                     /translation="MGDRTRRVRELIASDVAMHGLAYLGVLLLFAGAFGFTLFSFNTV
                     GAAMRPVAEIGVPSLLLGSAWFLRRRRAPVVATGLGLIGGLLLPVMLFASFVDGVAYP
                     PELDGNPLVATLAVVSVLLAIAYAGYSARHPDASLRYLVAPMAWAACWALGLVMTKDA
                     AGGIDLRDWSAGQLALVSVAVAVTAAFPRLHPRAGLSAAVRISVVPGIAIAYGLTLAL
                     AASEGWPPIPVAVAGLSALAVVELLAGTARTSDALDLLESAILGITASALVAGLGPGR
                     GGAATAVAFLVLLGWQERGGRGALARLVSGVGVGIGLSLSLADAWTAVAAFGVVSSWA
                     HVRRLGRSPGATVAENAIIDLAAALLPLGAAWGLVQALPPDVALAILACAPLAIATAV
                     RLTHRDDVFYAWWTPAAAVAVIAGTTWLPTPHDPVAASALATLAIATSPWWWPAATVW
                     ATAAGGAWTAHLGFQAAHVAAGHRSMAMSATGFAVVLASSIVRRTPVGGHVAAIGTLF
                     AVVALVFAPTETALLFAQMAWCAAWLLIVVDQERGGAPLVALAARLGRSPAARAGRGL
                     AAVPALVLATSLPFLVTSIGRHVDAIAAHRSWSGVVLSGLAIGYAIAARMAAPRKPLA
                     PVLAGASFAVAAVGIAVAAPDLVPSIEAVSALIVAVIALGGAVRKPVMTWTAWGASGA
                     LALLISAKTGGPVGDLPLVVLAWGAASMLGGLALDDVLSGRRTPGQGIRQTWLVAPVA
                     LGALAVPVGLAFLLTGPAAEAGRWALVGASFYLVAAVFLRAGAVSAVSYALTIVGIGA
                     LTPWSILDRPDTGPVFAAALVGASLIPSLAMRSRDPWLRWDLAPLVVAHGVAIIALAR
                     SLDVGGVPETWVGIGAVSITLAAVRRNPSWAVAGAVLILVGAWDAGPGWLALALGGGS
                     AGAALAATRSHGVVRLALQATSMICAAGAWSQFALWAAWPLPWTATFTALLTSAVAVS
                     VGLSARWAGLRKDWAAALGGLSLAGGMAVAVLGFAPASGIDPHTGAELLAPVWASIAA
                     GSGLAARPLGEPALRHLCVLLSLAAGALLGYGEQLEPAALTAAWSTTAVAATVGALAL
                     WRSRPGAAWILPLGQLGASAGAATIVVAGSAWPRRDLLEVALLVLGTQAATAGIVLRR
                     PEPLYVSSLLLCSAWLLFASESLAGEVQWFTVPIGIALLSIVAIGRAARRHQGLPPTS
                     PELLSLEFLGMTLVVGAGLAETVVASPERGLFAMVAGIGLAAWGALTRIRRRVFFGAG
                     AVVLAVTLMLGGPIARMVPNVTGPALWITIAATGVVLIALATGLERGRATVAATIRRL
                     DSLMEGWE"
     gene            4752..5729
                     /locus_tag="VF061_08390"
     CDS             4752..5729
                     /locus_tag="VF061_08390"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0070007 - glutamic-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PrsW family glutamic-type intramembrane
                     protease"
                     /protein_id="HEX6669560.1"
                     /translation="MNVRYRWAVVALAAGLGSMLWVILAGDDPPPNTLLVAAAAAPVA
                     VLLAVLGRTGGRLPGRAFVGGGVIGPVVALAGHAIVFAFAAAFILGFRESGRALLESL
                     RLDPRLTEIVSSPWVLLLLVDLAVVAPLAEEAGKALGAGLAHPATRRDAFVAGVAAGA
                     GFAVVENVLYASVAAILGGPWPAVVVARAMGAAVHPLASGLVVTGWWDAHHGRGSTAM
                     GKGFLAGAGVHAAWNASMVALIVAETAVRVSGGPGLIGTASLAFTGVLGVVAAAALWS
                     VAGAVVEGDAPTIEIRGSDVRTVAGWIVLTACLLVPVAILILAFPSFYP"
     gene            5954..>6445
                     /locus_tag="VF061_08395"
     CDS             5954..>6445
                     /locus_tag="VF061_08395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HEX6669561.1"
                     /translation="MDSPASEACINDGECGRRLSLTLAKGKYLYFYCLGQRGSARTGC
                     RQPYVLAGGTEAIVEDLYRRIQLPHSWVSRLTEELKAEIVERQAEASERRVVLTKMLA
                     KLADERSKLLHAFYANAIPLDLLKAEQDRIGATEQAAKAELETTEGDLDGWQHILRTA
                     IRLA"
BASE COUNT          753 a         2265 c         2332 g         1095 t
ORIGIN      
        1 cgggggacga agggtgccgg tggggcaatc ggtccggcac tccgcccacg actgagtctc
       61 tttaccccac ggtcaacacg tgttgacgcc actcgaagca cgtcggttcc gaaagtaccc
      121 aggggtaccc gggcactctc gacagccacg atgaggtggt tcccgtctgt gcgaatgcgc
      181 gtcgacccgc aaccatcacc gagaggagcg ccggaggagg gatccgccgt gcaaggtcgc
      241 aagaccctga tcatcgccgg aacggcagcc gggctcgtgc tcggcgggtc tcttgctccc
      301 gaggcgagtc tggcgttcgg cgccggagcc ggcgtcctcg tgtggatcgc cacccggcgg
      361 agccggccca ccgccgtggg cttcggcgag cacgccctgc gagttccgcc atcgtcgctc
      421 gggccggtca ccttcgcgca cgacgttcgt tcgcccgccc cgaggagcat cccttcaagg
      481 acaccatcgg atcggatcgg cacgaccgaa ctcgaccacc tcgcctacgc ggaagggttg
      541 ctcgcagaag ccgatcttca ggggttggtg gatccatcga ccgcggatcg gatacgcggg
      601 ctgatcgagg cacggcgtgt gcgggtcaac gcctcgatgc tctcaccgac cccgatcgca
      661 ccgccgcccg cctctccgat cccctcatcg gcgggaccaa cgcgaaacgc cccagcggcc
      721 gcggctgcac aggtggtcgc agcccgaccg acaccgagac cttcgcctat gggagaccgc
      781 acgcggcgcg tcagggagct gatcgcttcc gacgtcgcca tgcacgggct ggcctacctc
      841 ggcgtcctcc tgctcttcgc cggggccttc ggcttcaccc tcttctcctt caacacggta
      901 ggcgccgcga tgcgacccgt ggccgagatc ggggtccctt cactcctcct cggatcggca
      961 tggttcctcc ggcggaggcg agctccggtc gtggccacgg gcctcggcct gatcgggggg
     1021 ctcctcctgc cagtgatgct tttcgcctcg ttcgtcgacg gggtggccta cccgccggag
     1081 ctggacggga acccgctcgt ggcgacgctc gccgtggtct ccgtgcttct cgcgatcgcg
     1141 tatgcgggct actcggctcg acacccagac gcatcgctcc gatacctcgt ggcccccatg
     1201 gcgtgggccg cgtgctgggc gctgggtctg gtcatgacga aggacgccgc aggtgggatc
     1261 gacctgcggg actggagcgc cggccaactc gctctcgtat cggtggcagt ggccgtgacg
     1321 gcggccttcc cccgtctgca ccccagagcc gggttgtcgg cggcggtgcg gatcagcgtc
     1381 gtcccgggga tcgccatcgc ctacgggttg accctcgcgc tcgcggcatc cgagggctgg
     1441 ccaccgatcc ctgtggcggt ggcgggactc tcggcgctcg ccgtcgttga gctcctcgcc
     1501 ggtacggccc gcacgtcaga cgccctcgac ctcctggagt cggccatcct ggggatcacg
     1561 gcctccgcgc tcgtggccgg gctcggaccg ggtaggggtg gggcggccac ggcggtcgcc
     1621 ttcctcgtcc tcctcggatg gcaggagcgc ggcggccgag gagccctcgc gcgtctggtc
     1681 tcgggtgtgg gcgtggggat cggcctctcc ctgtcgctgg ccgacgcgtg gacggcggtg
     1741 gccgcgttcg gggtcgtgag ctcatgggcg cacgtccgcc gcctcggccg atctcccgga
     1801 gccaccgtcg ccgagaacgc gatcatcgac ctggctgcgg cgctgcttcc cctcggcgcg
     1861 gcgtggggcc tcgtgcaggc tcttcccccc gacgtggcgc ttgcgatctt ggcctgtgct
     1921 ccactcgcga tcgccaccgc cgttcggctg acacatcgcg acgacgtctt ctacgcgtgg
     1981 tggacgccgg cggccgcggt cgccgtgatc gccggaacca cctggctgcc gacaccccat
     2041 gatccggtgg cggcctcagc cctcgccacc cttgccatcg ccacctcacc gtggtggtgg
     2101 ccggcggcaa cggtctgggc caccgcagcg ggcggggcct ggaccgctca cctcggattc
     2161 caggcggcgc acgtcgcggc cggacaccgg tcgatggcga tgtcggcgac gggcttcgcg
     2221 gtcgttctcg cctcctcgat cgtgcggcga acgccggtcg gcggtcatgt cgccgcgatc
     2281 gggacgctgt tcgcggtggt cgccctggtc ttcgccccga cggagacggc cctgctgttc
     2341 gcccagatgg cgtggtgcgc ggcctggctc ctgatagtgg tggatcagga gcggggtggc
     2401 gcaccgctcg tcgcgctcgc cgctcggctc gggaggtcgc ccgccgctcg tgccggtcga
     2461 ggtctcgccg cggttcctgc gctcgtgctg gcgaccagcc ttccgttcct ggtcacctcc
     2521 atcgggcggc acgtggacgc catagccgcg caccgctcgt ggagcggcgt cgtcctttcg
     2581 ggactcgcga tcgggtacgc gatcgcggcg cggatggcgg cgccacgcaa gccccttgca
     2641 ccggtgctag cgggggcgtc gttcgccgtt gccgccgtgg gcatcgcggt tgccgccccc
     2701 gacctcgtgc cgagcatcga agcggtctcg gcgctcatcg tcgctgtgat cgcgctcggc
     2761 ggggcggtgc ggaaacccgt catgacctgg accgcgtggg gagcctcggg cgcgctcgcc
     2821 ctgctcatct ccgcgaagac cgggggcccc gtcggagacc taccgttggt cgtgctggcg
     2881 tggggggccg catcgatgct gggcgggctc gccttggacg acgtgctctc cggccgccga
     2941 acgccggggc agggcatccg gcagacctgg ctcgtggcgc cggtcgcgct cggtgcgctc
     3001 gcggtgcccg tggggctcgc gttcctgctc accgggccgg cagcggaggc cggaaggtgg
     3061 gcgttggtcg gcgccagctt ctacctggtc gccgcggtct tcctgcgcgc cggcgcggtg
     3121 agcgccgtct cgtacgcgtt gacgatcgtg gggatcggcg cgctgacacc ctggtcgatc
     3181 ctggaccgcc ctgacacggg accagtgttt gcggcggcgc tggtgggtgc atcgctgatc
     3241 ccctccttgg cgatgcgatc gcgagacccc tggttacgct gggacctcgc cccgctggtg
     3301 gtcgcccacg gtgtagccat catcgcgctg gctcgctccc tcgatgtggg aggggtcccg
     3361 gaaacgtggg tcggcatcgg ggccgtctcg atcaccctcg ccgccgtgcg ccgcaacccg
     3421 tcgtgggccg ttgcgggtgc cgtgctgatc ctcgtcggcg cgtgggacgc gggtccgggg
     3481 tggctggcgc tggcgctggg cgggggatcc gctggggcag cactcgcggc gacccgctcc
     3541 cacggcgtgg tccggttggc gctgcaggcc acgagcatga tctgtgcggc cggagcctgg
     3601 agccaattcg cactctgggc ggcatggccg ctaccctgga cggcgacctt cacggccctg
     3661 ctcacctccg cggtcgcggt ctcggtcggg ctctcggctc ggtgggccgg cctccgcaag
     3721 gactgggcgg cggcactcgg cggcctgtcg ctcgccggcg ggatggccgt ggccgtcctc
     3781 ggattcgcac cggcttccgg catcgacccg cacacgggcg ccgagctcct ggcgccggtg
     3841 tgggcttcga tcgccgccgg ctccggactg gccgcccggc ccctcggcga gccggccctc
     3901 cgccacctct gcgtcctcct gtcgcttgcg gcgggtgcac tgctcggcta cggcgagcaa
     3961 ctcgagccgg ccgcgctcac ggcggcgtgg tcgacgacgg ccgttgccgc cacggtcggt
     4021 gccctcgccc tgtggaggag ccgacccggc gccgcgtgga tcctccccct cggccaactc
     4081 ggcgccagcg ccggcgccgc cacgatcgtc gtcgccgggt cggcgtggcc gcggcgggac
     4141 ctcctcgagg tggcgctcct ggtgctcggg acccaggcgg ccaccgcagg gatcgtgctg
     4201 aggcgtccgg aacctctgta cgtctcgagc ctgctgctct gctcggcgtg gctcctgttc
     4261 gcctcggagt cccttgccgg agaggtccag tggttcacgg tgccgatcgg catcgccttg
     4321 ctgtcgatcg ttgcgatcgg acgtgccgcg cgcagacacc agggccttcc gccgacatcg
     4381 ccggagctcc tctcattgga gttcctcggc atgaccttgg tcgtgggtgc gggacttgcc
     4441 gagaccgtcg tcgcctcgcc agaacgcggc ctgttcgcca tggtcgccgg tatcgggctg
     4501 gcggcgtggg gcgcgctgac caggatccgc cgtcgcgtgt tcttcggtgc gggtgccgtc
     4561 gtgttagccg tgaccctgat gctcggcggt ccgatcgccc ggatggtgcc gaacgtcacc
     4621 ggcccggcgc tgtggatcac gatcgccgcg accggcgtgg tgctcatcgc gctcgcgacg
     4681 gggctcgagc gaggccgcgc aaccgtcgcg gcgacgatca ggcgtctcga ttccttgatg
     4741 gagggatggg agtgaacgtt cgctaccgct gggccgtcgt cgcgttggcc gcagggctcg
     4801 ggtcgatgct gtgggtcatc ctcgccggag acgatccgcc gccgaacacg ctgctggtgg
     4861 cggcggccgc agcacccgtc gcggtgctcc tcgccgtcct gggacgaacg ggtggacggc
     4921 tgccgggccg cgcgttcgtg ggaggcggcg tgatcggtcc cgtcgtggcg ctggccggcc
     4981 acgcaatcgt cttcgcgttc gccgcagcgt tcatcctggg gttccgggaa tcggggcgcg
     5041 cgctgctcga gtcgctccgg ttggatccgc gactgaccga gatcgtttcc tcaccctggg
     5101 tgctgctgct cctcgtcgac ctcgcggtcg tggctcccct cgccgaggag gcaggcaagg
     5161 cgctcggggc gggactcgcg catccggcaa cgcggcgaga cgcgttcgtt gcgggtgtgg
     5221 ccgccggcgc agggttcgcc gtcgtggaga acgtcctgta cgcctcggtc gcggcgatcc
     5281 tcggcggtcc ctggcccgcc gtcgtcgtgg cccgagccat gggagcggcc gtgcacccat
     5341 tggcttccgg cctcgtggtg acgggctggt gggacgccca tcatggacgg ggcagcaccg
     5401 ccatgggcaa ggggttcctc gccggagcag gcgtgcacgc ggcgtggaac gcgtcgatgg
     5461 tcgcgctgat cgtggcggag accgcggtcc gggtgagcgg cggcccgggc ctgatcggca
     5521 ccgcctcgct cgcgttcacc ggcgtgctgg gtgtcgtcgc cgccgctgcg ctgtggtcgg
     5581 ttgccggtgc ggtggtcgag ggggatgcgc cgacgatcga gatccgcggc tccgacgtga
     5641 ggaccgtcgc cggatggatc gtcctcacgg cctgtctgct ggtgccggtc gcgatcctca
     5701 tcctggcgtt cccgtccttc tacccgtaag agatgggacg ggtcgggaaa cgaccgctac
     5761 tctgcgcggt cgctgcgagg cctcgcacca agacatcgag cccgaactcg aagcgctcgt
     5821 ccatgtcgcc ggccgtgagg tgctccatga gggcgaaggt gtgtggggac ctcgagctcg
     5881 ccgatgcgat cccaacgctc gatcaagacg cgaactcaat tgggcctgcg tcggacgaag
     5941 ggattctcaa gtgatggaca gcccggcgtc ggaggcgtgc atcaacgacg gggaatgcgg
     6001 taggcgcctg tcgctcacgc tcgcgaaagg caagtacctg tacttctact gcctcggcca
     6061 gcgtggttcc gcgaggaccg ggtgccgcca gccctacgtc cttgccggcg gcaccgaggc
     6121 gatcgtggag gacctgtatc ggaggatcca gcttcctcac tcgtgggtga gccggctcac
     6181 cgaggagctg aaggccgaga tcgtcgagcg tcaggccgag gcatccgagc gccgagtggt
     6241 gctcacgaag atgctcgcca agctcgccga cgagcgaagc aagcttctgc acgccttcta
     6301 cgcgaacgcg atcccgcttg acctcctgaa ggcggagcag gaccgcatcg gtgcaacgga
     6361 gcaggcagcc aaggcagagc tcgagacgac ggagggcgac ctagacggtt ggcagcacat
     6421 tctccgaacg gccatccgac tcgcc
//
LOCUS       DASUYN010000427         2275 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_353207, whole genome shotgun sequence.
ACCESSION   DASUYN010000427 DASUYN010000000
VERSION     DASUYN010000427.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2275)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2275)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2275
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_353207"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2275
                     /locus_tag="VF061_08400"
     CDS             <1..>2275
                     /locus_tag="VF061_08400"
                     /inference="COORDINATES: protein motif:HMM:NF012343.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HEX6669562.1"
                     /translation="QRYLATGFMFFILGGLLAALMRIQLGTPDNTFLDPETYNQIFTM
                     HGTTMMFLFVIPFIEALANYLLPLLLGTRDLPFPRLTALSYWTYLFGGLLLYSSFLFG
                     MAPDGGWFAYVPLTNRQWSPGLNLDFWDIALSVAEVAAMGAAAEMIVAVLRMRAPGMS
                     INRIPVFGWAMLVTAFMIIFGFTPLIVGTAMLELDRKGLTSFFVPEHGGDPLLWQHLF
                     WVFGHPEVYIMFLPAVGILTHIFQVFSRRPVVSYTLVVLAIIATAFLSFGLWVHHMYA
                     TGLSPLAMGYFAAASTVIAIPTGVQVVGWLATLWSGRPLWRTPLVFALAGLVIFVLGG
                     ITGVMVASPPFDFQAHDTYFVVAHLHYVLIGGTIFPLFAGLYYWLPKITGRMLGERLG
                     WVSALTMFVGFNLAFFPMHISGLLGMPRRVYTYPAGMGLEIWNLLSSIGAFVFATGIL
                     LTIANFFLSLRRGAKAGNNPWNADSLEWSVSSPPPNAQYARLPVVRDRHPLWDEQWQQ
                     ERLRPEETPPRDEEAREDVAQMDHWPTRWRGALVVSVNEGRPLAVVHMPRRAISPFIT
                     SVGLVTLFAGLIVDYAPVIWAGLGLIVLGLIGWFWPQDTEVAAMEEVGRPGADELPLA
                     QYGPMANGYWGTWVFVMVLATALVTIIAAYFYLGGNVRPGGESAPMAPIGRSGLATAL
                     LLLGVVPMVLALRAIRQERGGLLRATVLATFALAALHLWLLLDALLGSGLAPGMSGRD
                     SAFVGLAGFHAVATFALL"
BASE COUNT          280 a          794 c          775 g          426 t
ORIGIN      
        1 cagcgctatc tcgccaccgg cttcatgttc ttcatcctgg gcggcctgct cgcggcgctc
       61 atgcggattc agctcggcac gcccgacaac accttcctcg acccggagac gtacaaccag
      121 atcttcacca tgcacgggac gacgatgatg ttcctcttcg tcatcccgtt catcgaggcg
      181 ctcgccaact acctgctgcc gctcctgctc ggcacccggg acctgccgtt cccgcggctc
      241 accgccctga gctactggac ctatctcttc ggcggcctgc tgctctactc cagcttcctc
      301 ttcggcatgg cgcccgacgg cggctggttc gcctacgtgc cgctcaccaa ccggcagtgg
      361 tcgcccgggc tcaacctcga cttctgggac atcgcgctca gcgtggccga ggtggccgcg
      421 atgggcgcgg cggcggagat gatcgtcgcg gtgctccgga tgcgggcgcc ggggatgtcg
      481 atcaaccgga tcccggtctt cggctgggcg atgctggtca ccgccttcat gatcatcttc
      541 gggttcacgc cgctcatcgt gggcaccgcg atgctggagc tggaccggaa ggggctcacc
      601 agcttcttcg tcccggaaca cgggggcgat ccgctgctct ggcagcacct cttctgggtg
      661 ttcggccacc ccgaggtgta catcatgttc ctgccggcgg tggggatcct gacccacatc
      721 ttccaggtgt tctcccgccg accggtagtg agctacacgc tggtggtgct ggcgatcatc
      781 gcgacggcgt tcctcagctt cgggctgtgg gtgcaccaca tgtacgcgac gggcctgtcg
      841 ccgctcgcga tgggctactt cgccgccgcc agcacggtga tcgccattcc caccggagtg
      901 caggtggtgg gctggctggc gacgctctgg agcggccgac cgctctggcg caccccgctg
      961 gtcttcgcgc tcgccggcct ggtcatcttc gtgctcggcg ggatcacggg cgtgatggtc
     1021 gcctcaccgc ccttcgactt ccaggcgcac gacacctatt tcgtggtggc ccacctgcac
     1081 tacgtgctga tcggcggcac gatcttcccg ctcttcgccg ggctctacta ctggctgcca
     1141 aagatcaccg gccggatgct gggcgagcgg ctgggttggg tgagcgcgct gaccatgttc
     1201 gtggggttca atctcgcctt cttcccgatg catatctccg gcctgctcgg catgccgcgg
     1261 cgggtgtaca cctatccggc gggcatgggg ctggagatct ggaacctgct ctcctcgatc
     1321 ggcgccttcg tcttcgccac cggcatcctg ctcacgatcg cgaacttctt cctgagcctg
     1381 cggcgggggg cgaaggccgg aaacaacccg tggaacgcgg actcgctgga gtggtccgtc
     1441 agctcgccgc cgcccaacgc gcagtacgcg agactgcccg tggtgcggga ccgccacccg
     1501 ctgtgggacg agcagtggca gcaggagcgg ctgcggccgg aggagacgcc gccccgggac
     1561 gaggaggcgc gggaggacgt ggcgcagatg gaccactggc ccacccgttg gcgcggggcg
     1621 ctggtggtga gcgtgaacga gggccggccg ctcgcggtcg tgcacatgcc gcgccgggcg
     1681 atctctccct tcatcacctc ggtgggactg gtgacgctct tcgccggcct gatcgtggac
     1741 tatgcgccgg tgatctgggc cgggctcggg ctcatcgtgc tcgggctgat cgggtggttc
     1801 tggccccagg acaccgaggt cgcggcgatg gaggaggtcg ggcgtcccgg tgcggacgag
     1861 ctgccgctgg cgcagtacgg ccccatggcg aacgggtact gggggacctg ggtcttcgtg
     1921 atggtgctgg caaccgccct ggtcacgatc atcgccgcct atttctacct aggcggcaac
     1981 gtccggcccg gcggcgagtc cgcgccgatg gctccgatcg gacgctcggg cctcgcgacc
     2041 gcgctgctgc tgctcggcgt cgtgccgatg gtgctggccc tccgggcgat ccggcaggag
     2101 cgcggcgggc tcctccgcgc caccgtgctc gccaccttcg ccctcgcggc actccacctc
     2161 tggctcctgc tggacgcgct gctcggcagc gggctggcgc ccgggatgag cggacgggac
     2221 tccgccttcg tcgggctcgc cggcttccac gccgtggcga cgttcgcgct gctgg
//
LOCUS       DASUYN010000428         2524 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1674865, whole genome shotgun sequence.
ACCESSION   DASUYN010000428 DASUYN010000000
VERSION     DASUYN010000428.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2524)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2524)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2524
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1674865"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1200)
                     /locus_tag="VF061_08405"
     CDS             complement(<1..1200)
                     /locus_tag="VF061_08405"
                     /inference="COORDINATES: protein motif:HMM:NF018899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="POTRA domain-containing protein"
                     /protein_id="HEX6669563.1"
                     /translation="MRAAVAGVCALLSPLLVTATLQAQESERVVRRLDFVGNTSITDV
                     VLSAGISTTVSSWFARSPIVSWIGLGEKRYFDEDEFRRDVIRLHVLYRRSGFPNAVVD
                     TAVVREPESVYITFRITEGEPMVVADLQVSGIDSLPAWLRRIATLDLPLQEGDPFNRY
                     AMQQSADSIERRLRDRGYPSATVFSGFEADRERLTARVNLDVEPSARAVIGAVDVVGV
                     RRIDTALVRELMVSRPGRRYSQDELLLSQQNLYQSDLFRYATVHIDSAEFQAGGDTVP
                     LLVQVNESRRRRIRGSLGYGTEDCFRGGLGWTTRNFLGSNGRLLDLTSRVSKVGVGDP
                     TDWGLADGLCSSSANDSIGSSVLNYHLSSTIRRPAFLTATSNLSVSVYTERRSEYQVY
                     LRRETGTT"
     gene            1359..>2524
                     /gene="dacB"
                     /locus_tag="VF061_08410"
     CDS             1359..>2524
                     /gene="dacB"
                     /locus_tag="VF061_08410"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:NF014200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004175 - endopeptidase activity [Evidence
                     IEA];
                     GO_function: GO:0009002 - serine-type D-Ala-D-Ala
                     carboxypeptidase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine
                     carboxypeptidase/D-alanyl-D-alanine-endopeptidase"
                     /protein_id="HEX6669564.1"
                     /translation="MDFKLSTGMAPFAALRVTTLVALGACALPALAPDLPGATLNAQS
                     LAKRLDRRLDTPPFDRSLWGVAVVDHNGKLLYGRNERRLFTPASNTKLVVTAVASALL
                     PPDFTVRTSLYAAGPVAAGVLRGDLVLYGRGDPTFSRRCYATDTLAQGVCDRDPFARL
                     RLLADTLKARGVRQVQGDVVGDGSWFEAASVHPGWELFDLNWWYAAPVAALAFNDNSL
                     DFVWQPGIRVGAPALISMWPDLGDIAFENRTVTVPAGGETDIGDRFFRQPGTGQVWAE
                     GTVAIDRAPRTEYFAVSDPNLFAARALRQALADAGIAVTGTTRSTADSALYAQARTRR
                     PLAETVSRPVRDWIFPILNTSQNLFAEMLLKQLGRRFGRAGSWVEGLEVERRFLV"
BASE COUNT          365 a          894 c          893 g          372 t
ORIGIN      
        1 cgtggtgccg gtctcccgcc ggaggtacac ctggtactcg gagcgccgct cggtgtacac
       61 cgacaccgag aggttggagg tggcggtcag gaacgcgggc cgccggatgg tggagctgag
      121 gtggtagttc agcaccgagg agccgatcga gtcgttggcg gaggagctgc acagcccgtc
      181 ggcgagcccc cagtcggtcg gatcgccgac gcccaccttg gacacccggc tggtgaggtc
      241 gagcaggcgg ccgttgctgc cgagaaagtt ccgggtggtc cagccgagcc cgccgcggaa
      301 acagtcctcg gtgccgtagc cgaggctgcc gcggatccgc cggcggcggc tctcgttcac
      361 ctgcaccagc aacggaacgg tatcgccgcc ggcctggaac tcggcggagt cgatgtggac
      421 ggtcgcgtag cggaagaggt cggactggta gaggttctgc tggctcagca ggagctcgtc
      481 ctgggagtag cgccggccgg gacgggacac catgagctcc cgcaccagcg cggtgtcgat
      541 ccgccgcacg ccgaccacgt ccaccgcacc gatcaccgcg cgggcgctgg gttccacgtc
      601 gaggttcacc cgggccgtga gccgctcgcg gtcggcctcg aagccggaga agacggtggc
      661 ggagggatag ccccggtcgc gcagccggcg ctcgatcgag tcggcgctct gctgcatggc
      721 gtagcggttg aaggggtcgc cctcctggag cgggaggtcg agcgtggcga tgcgccggag
      781 ccacgcggga agcgagtcga tcccgctgac ctggaggtcg gccaccacca tgggctcacc
      841 ctccgtgatc cggaaggtga tgtagacgct ctcgggctcc cggacgacgg ccgtgtccac
      901 cacggcgttg gggaagccgc tccggcggta gaggacgtgg agccggatga cgtcgcggcg
      961 gaactcgtcc tcgtcgaagt agcgcttctc gccgaggccg atccagctga cgatggggct
     1021 gcgggcgaac cagctggaga cggtggtgct gatgccggcg ctgaggacca cgtcggtgat
     1081 ggacgtgttt cccacgaagt cgagccgccg gaccacgcgc tcggactcct gggcctgcag
     1141 cgtcgccgtc accaggaggg gcgagagcaa cgcgcagacg cccgcgacgg ctgccctcat
     1201 cgagactccc cgtggaattg acgccatgtc gtaagcccgg tagtttgatc gagttacacc
     1261 gagaaagcaa cttgccgtgt cccggggtcc tcccgccgtc gcccgactca cctcccgacg
     1321 atacccatac gccgccgctt cacctcagcc aggtgctcat ggacttcaag ctctcgaccg
     1381 gcatggcccc cttcgctgcg ctccgggtga cgacgctggt cgccctcggg gcctgcgccc
     1441 tccccgctct cgcgcccgac ctgccgggag cgaccctgaa cgcccagtct ctcgccaagc
     1501 gactcgaccg ccggctcgac acgccgccct tcgacaggag cctgtggggc gtggcggtgg
     1561 tggatcacaa cggcaagctg ctctacgggc ggaacgagcg ccggcttttc accccggcga
     1621 gcaacaccaa gctcgtggtg accgcggtcg cgtccgcgct gctgccgccc gacttcacgg
     1681 tccggaccag cctctacgcc gcggggccgg tggccgccgg cgtgctccgg ggcgacctgg
     1741 tgctctacgg ccgcggcgat cccacgttca gccgccgctg ctacgcgacc gacacgctgg
     1801 cccagggcgt ctgcgaccgc gatccgttcg cccgcctccg gctcctggcc gacaccttga
     1861 aggcgcgcgg cgtgcggcag gtgcagggcg acgtcgtggg cgacgggagc tggttcgagg
     1921 ccgcctccgt ccatcccggc tgggagctgt tcgacctcaa ctggtggtat gccgcgccgg
     1981 tcgccgcgct cgccttcaac gacaacagcc tcgacttcgt ctggcagccg ggcatccggg
     2041 tgggcgcacc ggcgctcatc agcatgtggc ccgacctggg cgacattgcc ttcgagaacc
     2101 gcaccgtgac ggtgcccgcc gggggcgaga ccgacatcgg cgaccgcttc ttccgccagc
     2161 ccggcacggg gcaggtgtgg gccgagggga cggtcgccat cgaccgcgcc ccgcggaccg
     2221 aatacttcgc ggtgagcgac cccaacctgt tcgccgcccg cgcgcttcgg caggcgctgg
     2281 ccgacgcggg gatcgcggtc accgggacga ctcgctccac cgccgattcc gcgctgtacg
     2341 cgcaggcccg cacccgccgg ccgctggcgg agaccgtctc ccggccggtg cgggactgga
     2401 tcttcccaat cctcaacacc agccagaacc tcttcgccga gatgctgctg aagcaactcg
     2461 gcaggcgctt cggccgcgcc ggctcgtggg tcgaagggct cgaggtcgag cgccgcttcc
     2521 tggt
//
LOCUS       DASUYN010000429         4923 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1674982, whole genome shotgun sequence.
ACCESSION   DASUYN010000429 DASUYN010000000
VERSION     DASUYN010000429.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4923)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4923)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4923
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1674982"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..384)
                     /locus_tag="VF061_08415"
     CDS             complement(<1..384)
                     /locus_tag="VF061_08415"
                     /inference="COORDINATES: protein motif:HMM:NF024258.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HEX6669565.1"
                     /translation="MRLGVIADTHGLLRPEVFDVFREVDHILHGGDVGPPDILAELGT
                     IAPVTAVYGNTDGWDIRSQLPQVATIELDGFEIVVTHGDQFGTPTPENVQAAFPRAEI
                     IVFGHTHRPILTLVDTVVTVMNPGGA"
     gene            complement(387..1523)
                     /locus_tag="VF061_08420"
     CDS             complement(387..1523)
                     /locus_tag="VF061_08420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669566.1"
                     /translation="MRHVLRWATLVTALALTACGDDDGGQGPEDEGEPPVVGCTDGTW
                     EGSLTRVCFPADWNGDLIIYAHGYVEPQAPLAVPENVLAGTPVEELVNALGYAYATTS
                     YHANGLVADVAVADVVALESMVRSTVRPDPARVYLVGVSEGGLVAALAAERSAGVFSG
                     ALAACGPIGDFARQIDYLNDVRVVFDYFFPGVLPGDASAPPEDLVEGWTSTYAPAVVA
                     AITGDPDRGFELAAVTGTPTDELDAAGLASTVVALLRYNVLGTADAQARLGGQPYDNA
                     DRVYTGSSDDEALNAGVARFTADPAARATLERFETAGDPRVPVSIIHTTGDPIVPFFH
                     QALYEEKAIGAGTADRVARTDVERFGHCAFSSAEILAAFGELPR"
     gene            complement(1520..2119)
                     /locus_tag="VF061_08425"
     CDS             complement(1520..2119)
                     /locus_tag="VF061_08425"
                     /EC_number="2.5.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0106141 - flavin prenyltransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavin prenyltransferase UbiX"
                     /protein_id="HEX6669567.1"
                     /translation="MPSPRPVVLAITGASGAPYAVRLLQVLAQRRVPVWLVVSSHGLR
                     LLDAECGIVSLDALREATGGDWSTVVSFSDGDRGALPASGSQPTRGMVICPCSMGTVA
                     AVAGGTSRSLVERAADVTLKERRKLVLVPRETPLSLIHLRNLVTATEAGAVVIPAAPG
                     FYHRPSSVGELVDFIVQRVLDQLDLDIEIARRWTGEIPQ"
     gene            complement(2124..3050)
                     /locus_tag="VF061_08430"
     CDS             complement(2124..3050)
                     /locus_tag="VF061_08430"
                     /inference="COORDINATES: protein motif:HMM:TIGR01475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008412 - 4-hydroxybenzoate
                     octaprenyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiA-like polyprenyltransferase"
                     /protein_id="HEX6669568.1"
                     /translation="MTVRSSAGPPVRPAEGQTIGGESLLVRYANFVKLPHTLFALPFA
                     LLGVIAASMRAPVTLRAVGLVLLAFSAARWAAMGFNRIADRAFDARNPRTMQRELPRG
                     ALTLGQAWASVLAASAIFMLAAGALNRLCLFLSPLALAWILTYSLTKRFTWWPHLWLG
                     LSLAIAPVGGYLAVMGRWSEPAWPLLAVALAVATWVAGFDIFYALPDEAFDRREGLRS
                     AVVRLGEGRAILAAKLLHGITIPALALFGYGMGFGPWYYAGLVAAAAILAYEHGLVRP
                     GDISRLDAAFFTMNGIMSVTVFAFALLDRLVH"
     gene            complement(3047..4597)
                     /locus_tag="VF061_08435"
     CDS             complement(3047..4597)
                     /locus_tag="VF061_08435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthesis decarboxylase"
                     /protein_id="HEX6669569.1"
                     /translation="MAPANLREFLKVIESAGELVRVTEPVRARLEVAEIADRCMKSPG
                     GGPALLFEHVLLENGRRSPHPVAINLFGSMRRMCLALGVDDLETIGGRISELLEMKVP
                     EGLFGKLAMLPKLAEVGKFPPRVRGGRAPCQEVVLRGDAVNLDDIPFLTTWPGDGGRY
                     ITLPMVITRDPVRGIRNVGMYRIQVLGRNTLAMHWQRHKVGAAHWREMAAAGERMPVV
                     IALGGDPASIYSGSAPLPPTIDEFLFAGFLRREPVDLTRAVTCDLEVPSEAELVLEGY
                     IDPAEPLVLEGPFGDHTGFYSLADYYPRVHVTAVTARRDPLYPATLVGRPPMEDYYLG
                     HATERIFLPLLRLTVPEIVDYHMPAPGIFHNLVFVSIDKQYPGQAYKVMNALWGQGLM
                     SLAKVLVVVDKDVNVRDPDEAWWIALNNIDPERDVRFTMGPVDVLDHASRGFTYGSKM
                     GIDGTRKWKEEGFDREWPQRIVMDEETRRRVDELWPRLGIAPADGRAGGPADRRTASS
                     PTQRSTGA"
     gene            complement(4600..>4923)
                     /locus_tag="VF061_08440"
     CDS             complement(4600..>4923)
                     /locus_tag="VF061_08440"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX6669570.1"
                     /translation="NLVDLDAGLREAARVLKPGARLVILEMTLPPNPGLRRAFLFYFD
                     RVLPWIGRTVSKHTNAYTWLPESTRTFPPPAELAQRMERAGFTDVSYRLKLGGVTAVH
                     VGERA"
BASE COUNT          778 a         1712 c         1764 g          669 t
ORIGIN      
        1 ggccccaccg ggattcatca cggtgaccac cgtgtccacc agcgtgagga tcggccggtg
       61 ggtgtggccg aagacgatga tctccgccct cgggaacgcc gcctgcacgt tctcgggggt
      121 cggggtcccg aactgatcgc cgtgggttac cacgatctcg aagccatcga gctcgatggt
      181 cgcgacctgg gggagctgcg agcggatgtc ccacccgtcg gtattgccgt acacggcggt
      241 cacgggcgcg atggtgccga gctcggcgag gatgtccggc gggccgacgt caccaccgtg
      301 gaggatatgg tccacctcgc ggaacacgtc gaagacctcg ggccggagca ggccgtgggt
      361 gtcggcgatg acgcccagcc gcatcgtcag cgcggcagct cgccgaaggc cgccagaatc
      421 tcggccgacg agaaggcaca gtgcccgaat cgctccacgt cggtccgagc cacccggtcc
      481 gccgtgccgg ctccgatggc cttttcctcg tagagggcct ggtggaagaa ggggacgatg
      541 ggatcgcccg tggtgtggat gatcgagacc ggcacccggg gatcgccggc ggtctcgaag
      601 cgctccagtg tagcccgggc ggcggggtcg gccgtgaacc gggccacgcc ggcattcagg
      661 gcctcgtcgt cggaagagcc ggtgtacacc cggtccgcgt tgtcgtaggg ctgcccgccg
      721 agccgtgcct gggcgtccgc ggtgccgagc acgttgtagc ggaggagcgc gaccacggtg
      781 gaggcgaggc cggcggcgtc gagctcgtcg gtgggggtgc cggtgacggc ggcgagctcg
      841 aatccccggt cggggtcacc ggtgatcgcc gcgacgacgg cgggagcgta ggtcgaggtc
      901 catccctcca ccaggtcctc cggcggagcg ctcgcgtccc ccggcagcac cccagggaag
      961 aagtagtcga acacgacgcg gacgtcgttc aggtagtcga tctggcgggc gaagtcgccg
     1021 atcggcccgc acgccgcgag cgcgcccgag aagacccccg ccgagcgctc cgccgccagc
     1081 gccgcgacga gtcccccctc ggacacgccc accaggtaca ctcgcgcggg atcgggccgg
     1141 acggtgctgc ggaccatgga ctccagggcg acgacgtcgg ccaccgccac gtcggcgacg
     1201 aggccgttgg cgtggtagct ggtcgtggcg tacgcgtagc cgagcgcgtt caccagctcc
     1261 tccaccggcg tgccggcgag gacgttctcg gggacggcga ggggggcctg cggctcgacg
     1321 tagccgtgcg cgtagatgat cagatccccg ttccagtccg ccggaaagca cacccgggtg
     1381 agcgagccct cccaggtgcc gtcggtacag ccgacgaccg gcggctcgcc ctcgtcctcg
     1441 ggaccctgtc cgccgtcgtc atcgccgcag gccgtgaggg cgagcgccgt gaccagcgtc
     1501 gcccagcgaa gcacatgtct cattgcggaa tctccccggt ccagcggcgg gcgatctcga
     1561 tatcgaggtc gagctggtcg agcacccgct gtacgatgaa atccaccagc tcacccacgc
     1621 tggaaggccg gtgatagaag cccggtgccg cggggatgac cacggcgccg gcctcggtgg
     1681 cggtcaccag gttccggaga tgaatcagcg agagcggcgt ctcccggggc accaggacga
     1741 gcttgcgccg ctccttgagg gtcacgtcgg cggcccgctc caccagcgag cgggaagtgc
     1801 ccccggcgac ggccgccacc gtgcccatgg agcaggggca gatcaccatg ccgcgggtgg
     1861 gctgggaccc cgaggcgggc agcgcgccgc ggtcgccgtc ggagaacgac accaccgtgg
     1921 accaatcgcc gccggtggcc tcgcgcagcg cgtcgagtga gacgatgccg cactcggcgt
     1981 cgaggaggcg cagcccgtgc gaggagacga ccagccagac gggcacccgg cgctgcgcca
     2041 gcacctggag caggcggacc gcgtacggcg cccctgaggc gcccgtgatg gcgaggacga
     2101 cgggacgcgg gctcggcacc gtgtcagtgc accaggcggt cgagcagggc gaaggcgaac
     2161 acggtgacgc tcatgattcc gttcatggtg aagaacgcgg cgtcgaggcg ggagatatcc
     2221 ccgggccgca ccaggccgtg ctcgtaggcg aggatggccg ccgcggcgac cagccccgcg
     2281 tagtaccacg ggccgaaccc catgccgtag ccgaacagcg ccagcgcggg aatcgtgatg
     2341 ccgtgcagca gcttggcggc gaggatcgcg cgcccttcgc ccagtctcac caccgcgctc
     2401 ctgaggccct cgcggcggtc gaaggcctcg tcgggcaggg cgtagaagat gtcgaatccg
     2461 gccacccagg tcgcgacggc gagcgccacg gccagcagcg gccaggccgg ctcgctccac
     2521 cgtcccatga ccgcgagata gccaccgacc ggcgcgatcg ccaggctgag cccgagccag
     2581 aggtgcggcc accaggtgaa ccgcttggtg aggctgtagg tcaggatcca tgcgagggcc
     2641 agcgggctca ggaacaggca gagccgattg agggcgccgg cggcgagcat gaagatggcc
     2701 gatgccgcca gcaccgacgc ccaggcctga cccagcgtca gggccccgcg gggcagctcc
     2761 cgctgcatgg tgcgcggatt cctggcgtcg aacgcgcggt ccgcgatgcg gttgaacccc
     2821 atggccgccc accgggccgc ggagaaggcg agcagcacga gtcccaccgc gcggagggtc
     2881 accggcgcac gcatcgaggc cgcgatcacc cccagcagcg cgaagggcag ggcgaagagg
     2941 gtatgcggca gcttgacgaa gttggcgtag cggacgagga gcgactcgcc accgatggtc
     3001 tgaccttcgg cagggcggac cggcggtccg gcggatgacc ggacggtcac gcgccggtgc
     3061 tccgctgagt gggtgaggac gcggtccggc ggtccgccgg gccgccggcc cgcccatcgg
     3121 ccggtgcgat cccgagtcgc ggccacagct cgtccacccg ccgccgggtc tcctcgtcca
     3181 tcacgatccg ctgcggccac tcgcggtcga acccctcctc cttccacttc cgggtgccgt
     3241 cgatgcccat cttgctgccg taggtgaacc cgcggctggc gtggtcgagc acgtccaccg
     3301 gacccatggt gaagcgcacg tcgcgctcgg gatcgatgtt gttgagcgcg atccaccacg
     3361 cctcgtcggg gtcccggacg ttcacgtcct tgtccaccac cacgagcacc ttggcgagcg
     3421 acatcagccc ctggccccag agcgcgttca tcaccttgta ggcctggccg ggatactgct
     3481 tgtcgatcga gacgaagacg aggttgtgga agatccccgg cgcgggcatg tgatagtcca
     3541 cgatctccgg cacggtgagc cggagcagcg gcaggaagat gcgctcggtg gcgtgtccga
     3601 gatagtagtc ctccatcggc gggcgcccca ccagcgtcgc cgggtagagc gggtcgcgcc
     3661 gcgcggtcac ggcggtgaca tgcacccggg gatagtagtc cgcgagcgag tagaagccgg
     3721 tgtgatcgcc gaacggcccc tccagcacca gcggctcggc cggatcgatg tagccctcca
     3781 gcaccagctc ggcctcggag ggcacctcga gatcgcaggt cacggcccgg gtcaggtcta
     3841 ccggctcccg ccggaggaac ccggcaaaga ggaactcgtc gatcgtgggc ggcagcggcg
     3901 cggagcccga atagatgctg gcggggtcgc cgccgagcgc gatcaccacg ggcatgcgct
     3961 cgccggcggc ggccatctcg cgccagtggg ccgcccccac cttgtggcgc tgccagtgca
     4021 tcgcgagggt gttccggccc agcacctgga tccggtacat ccccacgttc cggatgccgc
     4081 gcaccggatc gcgggtgatg accatcggca gcgtgatgta gcgtccgccg tcgccgggcc
     4141 aggtcgtcag gaaggggatg tcgtccaggt tcaccgcgtc gccccggagc accacctctt
     4201 ggcacggcgc ccgcccgccg cgaacccggg gcgggaactt gccgacctcc gccagcttcg
     4261 gcagcatggc cagcttgccg aacaggcctt cgggcacctt catctccagc agctccgaga
     4321 tccggccgcc gatcgtctcg aggtcgtcca cgcccagcgc caggcacatc cgccgcatcg
     4381 agccgaagag attgatggcg acgggatgcg ggctgcggcg tccgttctcc agcagcacgt
     4441 gctcgaacag cagcgcgggg ccgccgcccg ggctcttcat gcagcggtcg gcgatttccg
     4501 ccacttccag ccgcgccctg accggctcgg tgacgcggac gagctctccc gccgactcga
     4561 tgaccttcag gaactcccgg agattagcgg gcgccatttt cacgctcttt cgccgacatg
     4621 caccgccgtc actcccccga gcttcaggcg gtagctcacg tccgtgaacc ccgcgcgctc
     4681 catgcgctgc gccagctcag cgggcggggg gaaggttcgg gtggactctg gtagccaggt
     4741 ataggcattc gtatgtttcg agaccgtgcg gccgatccag ggcagcaccc ggtcgaaata
     4801 gaagagaaat gcccggcgga gacccggatt cggtggcagg gtcatctcca gaatcacgag
     4861 gcgggcgccc ggtttgagta cccgcgccgc ctcgcgcagt ccggcgtcca gatccaccag
     4921 gtt
//
LOCUS       DASUYN010000430         2036 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_791027, whole genome shotgun sequence.
ACCESSION   DASUYN010000430 DASUYN010000000
VERSION     DASUYN010000430.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2036
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_791027"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..273
                     /locus_tag="VF061_08445"
     CDS             <1..273
                     /locus_tag="VF061_08445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669571.1"
                     /translation="TGVLLGVALPTGVRVFTSEERGVAEAWAINGAFSVAGSALAALT
                     GLTAGSDGLAMLAVPCYAIAWATAVRQHRLAGSRPEPVASPVPRTA"
     gene            complement(334..522)
                     /locus_tag="VF061_08450"
     CDS             complement(334..522)
                     /locus_tag="VF061_08450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp family type IVb pilin"
                     /protein_id="HEX6669572.1"
                     /translation="MHSLWKEFRSDDTGQGLVEYALIIALVAVGLIAILLILRNSIGD
                     VFNNAAESLENAPANPYP"
     gene            complement(770..1501)
                     /locus_tag="VF061_08455"
     CDS             complement(770..1501)
                     /locus_tag="VF061_08455"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX6669573.1"
                     /translation="MRSEYAEGYAELYRHHWWWRAREAYLVEVLRQYLPSRGSARILD
                     VGCGAGLFFERLSEFGSVHGVETDTTMKTGHPEIDDRIHWGTLESFPADSTFDAILML
                     DVLEHLPDPLPPLRRALALVGDRGVLVATVPAFRSLWTSHDDINEHFERYTRGPFGEL
                     LRTAGWRVELLRYFFHWTFPAKLAVRLVESVRPPRHEAQDLPRIPPEPVNRALYLLSR
                     LEQRSLGPVGVPFGSSLLAVATRGP"
     gene            complement(1512..>2036)
                     /locus_tag="VF061_08460"
     CDS             complement(1512..>2036)
                     /locus_tag="VF061_08460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX6669574.1"
                     /translation="FFYRLIARMSALDLPLDAGDFGLMSRRVVEQLRRAPEHHRYLRG
                     LRRWVGFRQTGIIVERSARAAGSSKYTPAKLLKLALDGIFAFSIVPLRAAALLGALAV
                     VTSCLFALYSLYAKLVLHQSPRGFTALVLVVTFLSGLQLLFLGLIGEYLGRVYEEVKG
                     RPLYIVDRVIGHRR"
BASE COUNT          352 a          692 c          699 g          293 t
ORIGIN      
        1 acgggagtcc tgctgggcgt cgcgctcccc accggggtga gagtcttcac cagtgaagag
       61 cggggagtcg cggaagcctg ggcgatcaac ggcgccttca gcgtcgcggg atcagccctc
      121 gcggcgctga cgggtctgac cgcgggaagt gacgggctcg ccatgctcgc cgtgccctgt
      181 tacgccattg cctgggcgac tgccgtaagg cagcaccgcc tggcgggctc gaggcccgaa
      241 ccggtggcca gcccggtgcc ccggacggcc tgatgccctg ccgggttctg cctcgtcccg
      301 ccacctcacg cctgctgtca tccggcgccg gcctcagggg tacgggttcg ctggtgcgtt
      361 ttcgagcgac tccgcggcgt tgttgaacac gtccccgatg ctgttcctca gtatcagcag
      421 aatggcgatg agccccaccg cgacaagagc gatgatcagg gcatactcca ccaatccctg
      481 accggtgtcg tcgctccgga attctttcca caaggaatgc atgttccctc ctggccacat
      541 ggccgcagcg ccgttgagcc gcactgcgtg agcctcgagg gtcagactga agcgggaagg
      601 gcgcacctac tcgtggaacg gcggccgcgg gtggcgagct tcggtcctgc gatagacgga
      661 tactggccca ggggctgctg acgggcgggg ccaaggtgcc ctgccctcga tcaatgtgag
      721 ccgcgggcca cagatgagca atagacccct tggcccgacc cgccgccctt catggcccac
      781 gcgtcgccac ggccaggagc gagctcccga agggaacccc caccgggccc agagatcgct
      841 gctccaggcg gctcagcagg tagagtgcac ggttgaccgg ttccggcggg attcgcggca
      901 ggtcctgagc ctcgtgccgg ggtggtcgga cggactcgac cagccgcacc gcgagcttcg
      961 cggggaaggt ccaatggaag aagtaccgga gcagctccac ccgccacccg gccgttcgca
     1021 gcagctcgcc gaacgggccc ctggtgtacc gctcgaagtg ctcgttgatg tcgtcgtgac
     1081 tggtccagag cgaccggaag gcgggcacgg tggcgacgag cacgccgcga tcccccacca
     1141 gggcgagcgc ccggcgcaac ggaggtagcg ggtccggcag gtgctccagc acgtcgagca
     1201 tcaggatcgc gtcgaaggtc gaatccgccg gaaatgattc cagcgtgccc cagtggatcc
     1261 ggtcgtcgat ctccgggtgc ccggtcttca tcgtcgtgtc ggtctcgaca ccgtgcacgc
     1321 tgccgaactc cgagagccgc tcgaagaaga gcccggctcc gcagcccaca tccagaatcc
     1381 gggctgaccc ccggctcggc aggtactggc gcaggacctc gaccaggtag gcctcccgcg
     1441 cccgccacca ccagtggtgc cgatagagct ccgcgtaccc ctcggcgtac tcgctgcgca
     1501 tggagggtcg ctcagcgccg gtggccgatc acccggtcca cgatgtagag gggtcttccc
     1561 ttcacttcct cgtacacccg tcccagatac tccccgatca agccgaggaa cagaagctgg
     1621 agaccggaca ggaaggtcac gaccagcacc agggcggtga agccgcgggg cgactggtgg
     1681 aggacgagct tggcgtagag cgagtagagc gcgaacaggc acgacgtcac cacggcgagg
     1741 gcgccgagca gcgccgccgc ccggagaggc acgatggaga aggcgaagat cccgtccaga
     1801 gcgagcttga gcagcttggc cggagtgtac ttgctgctgc cggcggcgcg cgccgagcgc
     1861 tccacgatga tgccggtctg ccgaaacccg acccagcggc gcaggccccg gagatagcga
     1921 tggtgctccg gggcccggcg caactgctcc accacccgcc gcgacatcag gccgaagtcc
     1981 ccggcgtcga gcggaaggtc gagggcggac atcctggcga tgagacggta gaagaa
//
LOCUS       DASUYN010000431         4413 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1896518, whole genome shotgun sequence.
ACCESSION   DASUYN010000431 DASUYN010000000
VERSION     DASUYN010000431.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4413)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4413)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4413
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1896518"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1871)
                     /locus_tag="VF061_08465"
     CDS             complement(<1..1871)
                     /locus_tag="VF061_08465"
                     /inference="COORDINATES: protein motif:HMM:NF013256.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669575.1"
                     /translation="MPKRTYHLIPHTHWDREWYLTRAAFACRLVPALDDLIDRLESEP
                     GFRAFALDGQTVLVEDYLAVRPAMEPRVRALVEAGRLQVGPWYVLADELVPSGESLVR
                     NLLAGREDAERLGGRLDVLYSPDAFGHPAIWPALAAEFGIRHGVLWRGRGGEPGQDGD
                     LFHWRAPDGREILIHHLSPDGYEAGAALPADRTRLAAAWPALKASLSSRSRSPHVAVF
                     VGADHHAAHPAVGRLRDFLAELEPEAEVRVTRLDEYFRAAGSAPEDLAHAEGELRWSY
                     GYTWTLQGVHATRAPLKRRHAEAELGLERLAEPLAALALWHRRYDARPPLRHAWRTLL
                     RSQFHDSIGGCTSDAVAERVRLRLEDAVTMGGEIARATLDALTGNDPDLAREQPERTA
                     PRLVLYNPVPRPRAGVVVAELSWFRRDVLVGPPGGRRPRAAGPPTARHVAEALEGLPH
                     QILSRRVGTERLDAARHYPDQDEVEFVRVALALPELGGFSLRVAGRRAAPAAVEVARG
                     RLSNGLLDVGLGRDGLIELADLRTGARFRGQLALESEDDRGDTYTFAPTPDDRAERSG
                     WSAARTTAAGPLVGALDMQSALRDGRVRARMTLSLYAGSPLLRCTLELENDAGDHRLR
                     "
     gene            complement(1885..2181)
                     /locus_tag="VF061_08470"
     CDS             complement(1885..2181)
                     /locus_tag="VF061_08470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669576.1"
                     /translation="MALTRERVREAVERAGDEHWQALIDFHEDAYPASRPTPGDICRA
                     EAERLNALGLGDDPDLTLAETRVEPLGATVRLVHVFQRKSTGARQETEPFENYG"
     gene            complement(2183..2476)
                     /locus_tag="VF061_08475"
     CDS             complement(2183..2476)
                     /locus_tag="VF061_08475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669577.1"
                     /translation="MARDLHYSRGPATTAIVVPSPLPGVGIMDASEALQRWAGRGFLV
                     LVAAFGMLGYYYANVRFLPLMAGFAILAAVCYAPRAASQATRALRESGRHRAI"
     gene            complement(2678..3829)
                     /gene="menC"
                     /locus_tag="VF061_08480"
     CDS             complement(2678..3829)
                     /gene="menC"
                     /locus_tag="VF061_08480"
                     /EC_number="4.2.1.113"
                     /inference="COORDINATES: protein motif:HMM:TIGR01928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate synthase"
                     /protein_id="HEX6669578.1"
                     /translation="MRVTRVELLELSLPLVEPFVISGGTMHERRSMVVVLHDDTGHRG
                     YGESPPFELPFYSEETLAGARHLLKQVLIPRVLGGRFESPEAVDAALRPGVRGNSFAR
                     AAIETAAWDLEAHRRNTGLAALLGERLGAEPAEVVPCGVALGIPVDRSTDTLKRWIGE
                     AVASGYRRVKIKVAPGWDEVPVRAAREALAGTSLPLTVDANGGYEWPEHEHALRALDE
                     AGLLYIEQPLHPDELVGHARLAERLKTAVCVDETLRDARAARQIAELGGPLVWNVKVH
                     RVGGLSEVCRIIRTARECGARLWAGTMPESGLGSQAALAAAAMPGFVYPSDLEPSARW
                     FGRNTDVIKLTMTADGLMRVPGVPIAALLDTGRFGSASRRVLDASATPA"
     gene            complement(3829..>4413)
                     /locus_tag="VF061_08485"
     CDS             complement(3829..>4413)
                     /locus_tag="VF061_08485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669579.1"
                     /translation="FSPTLAGDSLADERERIIRWLREVPGLIRRSADGQPVRVALKLM
                     NARHGDSFQCDMVEAAAGADALVCFNRLWSADRGVAYGGYDLSDRNLRTLAAVTAAGI
                     RRPPLCGTGNVSSGRMILEYAKLGCESVQLHTFFQLPLAEYPATVGSRTQRALHALIF
                     HPESGLIAGLLDLEDSGRLHRRNGELHFLDLPLS"
BASE COUNT          678 a         1588 c         1581 g          566 t
ORIGIN      
        1 cgcagccggt ggtcgccggc gtcgttctcg agctcgagcg tgcatcgcag cagcgggctg
       61 ccggcgtaga ggctgagtgt catcctcgcg cgcacgcgcc cgtctcgcag tgcgctctgc
      121 atgtcgaggg caccgacgag cggccccgcg gccgtggtgc gcgcagcgga ccagccgctc
      181 cgctcggccc gatcgtccgg agtcggcgcg aaggtgtagg tgtcgccacg atcgtcctcg
      241 gactccagcg ccagctgtcc ccggaagcgg gcaccggttc ggaggtcggc cagctcgatg
      301 agcccgtcac gcccgaggcc cacatcgagc agcccgttcg acagacggcc gcgcgcgact
      361 tcgaccgcgg cgggtgctgc gcgtcggccc gccacgcgga gcgagaagcc gcccagctcc
      421 ggcagcgcga gcgcgactcg cacgaactcc acctcgtcct ggtcgggata gtgccgcgcg
      481 gcatcgagcc gctcggtgcc cacgcggcgg ctcaggatct gatgcggcag gccctcgagc
      541 gcttcggcca cgtggcgggc ggtgggcggc cccgccgctc ggggccgccg cccccccggc
      601 gggcccacca ggacgtcgcg ccgaaaccag ctcagctccg cgacgacgac accggctcgg
      661 ggccggggca ccggattgta gagcacgagc cggggggcag tgcgctccgg ctgctcccgc
      721 gcaaggtcgg ggtcgttgcc ggtgagggcg tccagtgtcg cgcgcgcgat ctctccgccc
      781 atcgtgaccg cgtcctcaag tcgaagcctg acgcgctccg ccacggcatc cgaagtacac
      841 ccaccgatcg agtcatggaa ctgcgatcgt agaagcgtgc gccaggcgtg gcgcagaggc
      901 ggacgcgcgt cgtaccgccg gtgccacagc gccagcgcgg cgagcggctc ggccagccgc
      961 tcgagaccca gctccgcctc cgcatgccgc cgcttgagcg gggcgcgggt cgcatgcacg
     1021 ccctggaggg tccaggtgta gccataggac cagcgaagct ctccctctgc atgggccagg
     1081 tcctccgggg cggacccggc cgcccggaag tactcgtcca gacgggtgac gcgcacctcc
     1141 gcctccggct ccagctccgc gaggaagtct cgaagccgcc ccaccgccgg atgcgccgcg
     1201 tggtggtccg cgcccacgaa caccgcgacg tgcggcgagc gcgatcggga actgagcgac
     1261 gccttcagcg ccggccacgc ggccgcgagc ctcgtgcgat cggccggcag cgcggcgccc
     1321 gcctcgtacc cgtcgggcga gagatggtgg atcaggatct cgcgcccgtc gggggcgcgc
     1381 caatggaaga ggtcaccgtc ctggcccggc tcgccgcctc gcccgcgcca gagcacgcca
     1441 tgccggatgc cgaattccgc tgcgagcgcg ggccagatcg cagggtgacc gaaggcgtcg
     1501 ggcgagtaca gcacgtcgag tcgtccgccg agccgctcgg cgtcctcccg gccggcgagc
     1561 aggttgcgca ccagcgactc gcccgagggg accagctcgt cggccagcac gtaccacggg
     1621 ccgacctgga gcctgcccgc ctccaccagc gcgcgcaccc gcggctccat ggcgggccgc
     1681 accgcgagat agtcctcgac cagcacggtc tggccgtcga gcgcgaaggc gcgaaacccg
     1741 ggctcggact ccaggcggtc gatcaggtca tcgagggcgg ggacgagacg gcaggcgaat
     1801 gcggcgcggg tgagatacca ctcccgatcc cagtgagtgt gggggatgag atggtaggtc
     1861 cgtttcggca tgccaccaag ctaactaccc gtaattctcg aacggctcgg tttcctggcg
     1921 ggcgcccgtg gacttgcgct ggaacacgtg gaccaggcgg acggtggcgc cgaggggctc
     1981 gacgcgggtc tcggccagag tgaggtcggg gtcgtcgccg aggccgaggg cgttcagtcg
     2041 ctcggcctcg gcccggcaga tgtcgccagg cgtcggccgg ctggcggggt aggcatcctc
     2101 gtggaagtcg atcagcgcct gccagtgctc gtcaccggcg cgctccaccg cttcgcggac
     2161 gcgctccctg gtgagtgcca cgtcagatcg cgcggtgccg cccggattcc ctgagggccc
     2221 tggtcgcctg ggaggcggcc cgaggggcat agcagaccgc ggccaggatc gcgaagcccg
     2281 ccatgagggg aaggaagcgg acgttcgcgt agtaatagcc gagcatcccg aaggcggcta
     2341 ccagcaccag gaagcctcgc cccgcccagc gctgaagcgc ctcgctcgca tccatgatcc
     2401 cgactcccgg tagaggtgac gggaccacga tggccgtggt cgccggccca cggctgtagt
     2461 gcaggtcacg agccacccgt gaccctggcg gcgctaccgg gaccggaggg cccaagtcac
     2521 catccggagc acgataagga tcaggagagc gtaccccacc aattcccagt tgacgcggga
     2581 aagccacact tctgcggtgc ggccgagcga ttgcagagac gccaacccac tgtgcgccag
     2641 cagcatcgcg tactcaacca tcctgcctcc aagggggcta agccggcgtg gcagaagcgt
     2701 ctaggacgcg gcgagaggcc gagccgaagc ggccggtgtc caggagtgcc gcaatcggca
     2761 cgccgggaac ccgcatgagg ccgtccgcgg tcatggtgag cttgatgacg tcggtgttgc
     2821 gaccgaacca gcgggcgctc ggctcgagat cggacgggta gacgaacccc ggcatggccg
     2881 cggccgccag cgccgcctgg gagccgaggc cggactcggg catggtgccc gcccacagcc
     2941 tggcaccgca ctcgcgggcc gtgcggatga ttcggcagac ctccgagagc ccacccaccc
     3001 ggtggacttt cacgttccac accagcggcc cgcccagctc ggcgatctgg cgcgcggcgc
     3061 gggcgtcgcg cagcgtctcg tccacgcaca ccgcggtctt cagccgctcg gccaggcggg
     3121 cgtggccgac cagttcgtcg ggatgcagcg gctgctcgat gtacagcagc ccggcttcgt
     3181 ccagcgcgcg cagtgcatgc tcgtgctcgg gccactcgta cccaccgttg gcgtccacgg
     3241 tgagcggaag gctcgtgccc gccagcgcct cacgcgcggc gcggaccggc acctcgtccc
     3301 accccggcgc caccttgatc ttcaccctcc ggtagccgga cgccaccgct tccccgatcc
     3361 agcgcttcag ggtgtcggtg gagcgatcca ccggaatgcc gagggcgaca ccacaaggca
     3421 cgacctccgc gggctcggcc ccaagccgct cgcccaggag cgcggcgagc ccggtgttcc
     3481 gccggtgggc ttcgagatcc cacgccgccg tctcgatcgc cgcccgggcg aagctgttgc
     3541 cccgcacgcc cggccggagc gcggcgtcca cggcctccgg cgactcgaac cggccaccga
     3601 gcactcgggg gatcaggacc tgcttcagga gatggcgtgc cccggcgagc gtttcctcgg
     3661 agtagaaggg cagctcgaac ggcggagact cgccgtagcc acggtggccg gtgtcgtcgt
     3721 gcaggaccac gaccatggag cgccgctcgt gcatcgtgcc ccccgagatg acgaagggct
     3781 cgaccagcgg cagcgagagc tccaggagct cgacccgggt tacgcgcatc aggagagcgg
     3841 caggtcgagg aagtgaagct cgccgttgcg gcggtgcagc cggcccgaat cctcgaggtc
     3901 gagcaggccc gcgatgaggc cgctctcggg atggaagatc aacgcgtgca gtgcccgctg
     3961 ggtccgggaa ccgacggtgg cgggatactc ggcgagcggg agctgaaaga aggtgtggag
     4021 ctgcacgctc tcacagccga gcttggcgta ctccaggatc atgcgaccgg aggacacgtt
     4081 gccggtaccg cagagcggtg ggcggcggat cccggccgcc gtcaccgcgg ccagcgtccg
     4141 caggttgcgg tcgctcagat cgtacccccc gtaggccacc ccacgatcgg ccgaccagag
     4201 ccggttgaag cagaccagtg catcggcccc agccgcggcc tccaccatgt cgcactggaa
     4261 cgaatcgccg tgccgtgcgt tcatcagctt cagggcgacg cgcaccggct gcccgtcggc
     4321 ggaccggcga atcaggccgg ggacctcgcg gagccagcgg atgatccgct cgcgctcgtc
     4381 ggcgagcgag tcgcccgcca gcgtggggga gaa
//
LOCUS       DASUYN010000432         3710 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1675686, whole genome shotgun sequence.
ACCESSION   DASUYN010000432 DASUYN010000000
VERSION     DASUYN010000432.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3710)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3710)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3710
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1675686"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..248)
                     /locus_tag="VF061_08490"
     CDS             complement(<1..248)
                     /locus_tag="VF061_08490"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX6669580.1"
                     /translation="MTTPPARIFAPDLLAGRVALVTGGGTGIGLGIASCLGAAGATVV
                     IASRKPEHLTAGAEALRAQGVAVTTVEANVREPDAVRT"
     gene            complement(245..1009)
                     /locus_tag="VF061_08495"
     CDS             complement(245..1009)
                     /locus_tag="VF061_08495"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEX6669581.1"
                     /translation="MSEELLSREEGPVHRLTLNRPARRNALTPDLAAAIVQELDRIEE
                     RGAAHVVVLAGAGGHFCAGLDLHWLRSLGAGPSPGELQRGLASFQSAVLAIVRCQLPV
                     IAELRGSAAGFGLDLALACDMRFAESGATLTSAFSRMGLVPDGGSTFTLPRLVGLGHA
                     LRLLMTGETVSAERAGALGLVDEVKPGAELDAAVGAVAKAIAAAAPASVRAVKRLVRA
                     DELGALEQALASEGAAQIQALQSPEFQRRLEAFVTR"
     gene            complement(1021..1917)
                     /locus_tag="VF061_08500"
     CDS             complement(1021..1917)
                     /locus_tag="VF061_08500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-[acyl-carrier-protein] reductase"
                     /protein_id="HEX6669582.1"
                     /translation="MLSIDLRGKRALVAGVSDDGGFGFAIAKSLAEAGATICVGSWPP
                     ALGIFSKLLERGKIEDSLRLSDGRKLEFERIYPLDAAFDAMADVPQDVRDNKRYKEQG
                     DFTIEGLTHRLRDDFGEGGLDIVVHSLANGPEVKSPLVDTSRAGYLAAVSVSAYSNVS
                     LVRSLSPLMRSPGAFLSLTYLAGERVIPGYGGGMSSAKAALESDTRTLAFEAGRRWGV
                     RVNAISAGPWASRAASAIGFIDTMIQYTSANAPLPRPIQATDVGNTAAFLCCPLAGAI
                     TGSVVYVDNGYHAMGMAVAQPG"
     gene            2100..3038
                     /locus_tag="VF061_08505"
     CDS             2100..3038
                     /locus_tag="VF061_08505"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEX6669583.1"
                     /translation="MAVLSFVVLVAYACSDGAAPPEPDPEPTPPEAPAPPEPEPPPPE
                     PPEPPPPPPPVSEIFVGAGDIAGCTERFFDEATADLLDDIEGTVFALGDNVQGAGTPE
                     DFANCFEPSWGRHKERIYPAVGNHEYNVEGAVPHFEYWGERAGPPGKGYYSYDLGAWH
                     IIVLNSNLLFEEQNEWLAADLAANPARCTLAYWHHPWFTSTAYRGAEELKRFVEILEE
                     AGADVVLTGHAHGYERFAPQTADGEPDEERGIRHFVVGSGGAPFHPFKQTKPNSEVRV
                     LAYGLLKLELFADRYTWEFVPVPGESFTDEGEGVCH"
     gene            complement(3051..>3710)
                     /locus_tag="VF061_08510"
     CDS             complement(3051..>3710)
                     /locus_tag="VF061_08510"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEX6669584.1"
                     /translation="DEIVWDVQGIRVPTRVASLREVDWARFEPNFFVVFEPGSLEGAP
                     HTLVTLTRIERPAERGAFQRLLAERLPNVTTLDLSVVQEALERLVDRVVLAIRFMAGF
                     TLVTGTLVLVGALATSRFQRIREGALLRTLGATRSQLFRIVLAEYFALGAMAAVVAAA
                     LSVAAAWALTTWVFEGRFSPQPLSLATLVVGVVTLTVVVGLLNSREVIRRTPLEVLRG
                     E"
BASE COUNT          564 a         1324 c         1349 g          473 t
ORIGIN      
        1 atcgtgcgga cggcgtctgg ctcgcggacg ttggcctcca ccgtcgtcac cgcgacgccc
       61 tgggcccgga gggcctccgc gccggcggtc aggtgctccg gcttccggct ggcgatgacg
      121 acggtcgcgc ccgcggcgcc gagacaggag gcgatcccga gcccgatgcc ggtgccgccg
      181 ccggtgacga gcgcgacccg gcccgccagc aggtcgggag cgaagatccg ggcggggggc
      241 gtggtcatcg ggtgacgaac gcctccagcc ggcgctggaa ctccggactc tggagcgcct
      301 ggatctgggc cgcgccctcg gaggcgagcg cctgctccag tgcgcccagc tcgtcggcgc
      361 ggaccaggcg cttgaccgcg cgcacgctgg ccggggcggc cgcggcgatc gccttggcca
      421 cggcacccac cgcggcgtcg agctcggccc cgggcttcac ctcgtccacc agcccgagcg
      481 cgccggcgcg ttccgcgctc actgtctcgc ccgtcatcag gaggcgcagc gcgtggccca
      541 ggcccaccag gcggggcagg gtgaaggtgg agccgccgtc cggcaccagg cccatgcgcg
      601 agaatgcgga ggtgagggtc gcgcccgatt cggcgaagcg catgtcgcac gcgagggcca
      661 ggtcgaggcc gaagccggcg gcggagccgc ggagctcggc gatgacgggg agctggcagc
      721 ggacgatggc gaggaccgcc gactggaagg acgcgaggcc ccgctggagc tccccggggg
      781 aagggcccgc gccgagtgag cgcagccagt ggagatcgag gccggcgcag aagtggccgc
      841 cggcccccgc cagcaccacc acgtgggccg cgccacgctc ctcgatccgg tccagctcct
      901 gaacgatcgc ggccgccagg tccggggtga gcgcgttacg gcgggccggc cggttgagcg
      961 tcagccggtg gacggggccc tcctcgcggg agagcagctc ttccgacacc tggtcctcct
     1021 tcaccccggc tgcgccacgg ccatccccat cgcatgatac ccgttgtcca cgtagaccac
     1081 gctgccggtg atcgcgcccg ccagcgggca gcagaggaac gccgccgtat tgccgacgtc
     1141 ggtggcctga atcggccgcg gcaacggggc gttggcgctg gtgtactgga tcatcgtgtc
     1201 gatgaagccg atcgcggagg cggcgcggga ggcccacggg ccggcggaga tcgcgttcac
     1261 ccgcacgccc cagcggcgcc cggcctcgaa ggcgagggtg cgggtatcgg actcgagcgc
     1321 ggccttggcc gaggacatgc caccgccgta gcccggaatc acgcgctcgc cggcgagata
     1381 ggtgagcgag agaaacgcgc cgggggagcg catgagcggc gacaggctcc gaaccaggga
     1441 cacgttgctg tacgcgctga cgctcaccgc cgcgaggtat cccgcccggg acgtgtccac
     1501 cagcggcgac ttcacctcgg gcccgttggc caggctgtgc accacgatgt cgaggccgcc
     1561 ctcgccgaag tcgtcccgca accggtgggt gagcccctcg atggtgaagt cgccctgctc
     1621 cttgtagcgc ttgttgtcgc gcacgtcctg gggcacgtcg gccatggcgt cgaaggccgc
     1681 gtcgagcgga tagatccgct cgaactcgag cttgcggccg tccgagagcc ggagggagtc
     1741 ctcgatcttg ccccgctcca gcagcttgga gaagatcccg agggccggcg gccagctgcc
     1801 gacgcagatg gtggcgcccg cctcggccag cgacttggcg atggcgaagc cgaagccccc
     1861 gtcgtccgac acgccggcga cgagggcacg cttgccgcgg agatctatgg agagcatggg
     1921 caatagtata gccgggcgcg gaggcccgtg ggcaggcggg tggcggtgcg cgccgtcacg
     1981 gcggggaatc gccggccggt caaaggtgga ggtctcccgc ggccggggtg ccgccacggt
     2041 tcgaacccag tcccgaggtc caggtgagcg taggcggcgc agcggtccgg agaatgtcgg
     2101 tggcggtcct gtcgttcgtg gtgctcgtcg cctacgcatg ctccgacggg gcggccccgc
     2161 cggagcccga tcccgagccc actccgcccg aggcgccggc tcctcctgag cccgagccgc
     2221 ctccccccga gccgccggag ccccctccgc caccgccacc cgtctccgag atcttcgtcg
     2281 gggccgggga tatcgccggc tgtaccgagc gcttcttcga cgaggccacc gccgacctgc
     2341 tcgacgacat cgagggcacc gtgttcgccc tcggggacaa cgtgcagggc gccggcactc
     2401 cggaggactt cgccaactgc ttcgagccga gctggggacg acacaaggag cgcatctatc
     2461 ccgcggtggg gaaccacgag tacaacgtgg agggggccgt gccccacttc gagtactggg
     2521 gcgagcgcgc cggcccaccc ggcaagggct actacagcta cgacctgggc gcctggcaca
     2581 taatcgtgct caacagcaac ctgctcttcg aggagcagaa cgagtggctg gccgcggacc
     2641 tcgcggccaa cccggcccgg tgcaccctcg cctactggca ccatccctgg ttcacctcca
     2701 cggcgtaccg cggtgccgag gagctcaagc gcttcgtcga gattctggag gaggcgggag
     2761 ccgacgtcgt gctcaccggc cacgcccacg gctatgagcg cttcgccccc cagactgccg
     2821 acggtgagcc ggacgaggag cgggggatcc gccacttcgt ggtgggaagc ggcggcgcgc
     2881 ccttccatcc gttcaagcag accaagccga acagtgaggt ccgggtgctg gcgtacggcc
     2941 tgctgaagct ggagctgttc gcggaccgct acacctggga gttcgtgccg gtgccgggag
     3001 agagctttac ggatgaaggc gagggggtgt gccactgagc gcgggggcga tcattccccg
     3061 cgcagcacct ccaggggcgt ccgccggatc acctcgcggc tgttgaggag ccccaccacc
     3121 acggtgagcg tcaccacgcc gaccaccagg gtggcgaggg acaggggctg gggggagaag
     3181 cggccctcga acacccacgt ggtcaatgcc cacgcggccg ccaccgagag ggcggccgcc
     3241 acgaccgccg ccatcgcgcc gagggcgaag tactccgcca gcacgatccg gaagagctgc
     3301 gagcgggtgg cgccgagcgt ccggagcagg gcgccttccc ggatgcgctg gaacctgctg
     3361 gtcgcgagcg cgcccaccag caccagggtt ccggtaacga gcgtgaatcc cgccatgaac
     3421 cggatcgcga gcacgacccg gtccaccagc cgctccagcg cctcctgcac caccgagagg
     3481 tccagcgtgg tcacgttggg cagacgctcg gcgagcagcc gctggaaggc gccccgctcg
     3541 gcggggcgct cgattcgcgt caaggtcacc agggtgtgcg gcgctccctc cagcgagccg
     3601 ggctcgaaca cgacgaagaa gttcggctcg aatcgcgccc agtccacctc gcgcaggctc
     3661 gccacccggg tcggaaccct gatcccctgc acgtcccaca cgatctcatc
//
LOCUS       DASUYN010000433         2770 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_354106, whole genome shotgun sequence.
ACCESSION   DASUYN010000433 DASUYN010000000
VERSION     DASUYN010000433.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2770)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2770)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2770
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_354106"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..579
                     /locus_tag="VF061_08515"
     CDS             <1..579
                     /locus_tag="VF061_08515"
                     /inference="COORDINATES: protein motif:HMM:NF024994.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HEX6669585.1"
                     /translation="KRYLFRFPKERRTMLVGPNCAGVISPGKAMLGIMPGHIYMQGNV
                     GLITRSGTLGYEAAAQMKALGIGITTSVGIGGDPINGSSFLDHLRLFEQDPETDAVMI
                     IGEIGGPQEAEAALYAKENMAKPVIGYVAGLTAPKGRRMGHAGAIISAFGDTAAEKAE
                     MMRLAGLTVAASAAELGSTVKAALGKRTLAAR"
     gene            576..1550
                     /locus_tag="VF061_08520"
     CDS             576..1550
                     /locus_tag="VF061_08520"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008465 - glycerate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycerate dehydrogenase"
                     /protein_id="HEX6669586.1"
                     /translation="MTARPAVVVTRRLPEPVERELQNDFDATLNAEDRPLGPDGLRRA
                     LQSADALLCTVTDRLTAEVLDVEPRRARLLANFGVGFNHIDVEAARQRGLAVSNTPDV
                     LTDATADIAMTLLLGVTRRAGEGERHLRAGQWTGWRPTHMLGTQVSGKTLGLVGMGRI
                     ARAVAKRAHQGFEMKVIFHDPYPPPPDVARALGAEPRERLEQVLEEADFVSLHCPATP
                     ETRHLMNAERLALLKPGSYLINTARGDVVDEAALVAALRGGRLAGAGLDVYEREPQVS
                     PELLAMENVVLLPHLGSATRETRIAMGMRALENLRLFFQGKPLRDKVV"
     gene            1547..>2770
                     /locus_tag="VF061_08525"
     CDS             1547..>2770
                     /locus_tag="VF061_08525"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: protein motif:HMM:NF012532.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008964 - phosphoenolpyruvate carboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0015977 - carbon fixation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HEX6669587.1"
                     /translation="MTQAGPEPFAAGALPESADPAAASAAAYATEVVELLSALLLQLA
                     RERQPDIEPLLRGEGDVRSVSPDVVARALQVQGIWFQLLSIAEQNAAMRRRRQVEAER
                     GHEQLRGTFANVVSTAAAAGIPAADIHGLLAQLRVRPVITAHPTEAKRVTVLEKHRRI
                     YRRLVELESPRWTPRERQALVDGLRNDIELLWLTGELRLAKPTVPQEVYWGLHFFNET
                     LFEAVPDLLEKVERALRQYYPGERFEVPTFFQFGSWIGGDRDGNPFVTNEVTRTTLLE
                     NRLTGVRRYHRRLSDLVRLLSITERSIPPSERFRQALERELAATGEGDAIAGRNPGEI
                     IRQYLATMLRRLEVMIRATERGDARVDPAGYASADALIGDLRLIESELIDSGRREIAE
                     ALVRPVRREVEAFRFS"
BASE COUNT          417 a          982 c         1008 g          363 t
ORIGIN      
        1 aagcgctacc tgttccgctt tcccaaggag cggcgcacca tgctggtggg ccccaactgt
       61 gccggggtca tcagcccggg caaggcgatg ctggggatca tgccgggcca catctacatg
      121 caggggaacg tgggcctcat cacccgctcg gggacgctgg gctacgaggc ggccgcccag
      181 atgaaggcgc tgggcatcgg catcaccacc agcgtgggca tcgggggcga ccccatcaac
      241 ggcagctcgt tcctcgatca cctcagactc ttcgagcagg acccggagac cgacgcggtg
      301 atgatcatcg gcgagatcgg cgggccgcag gaggcggagg ccgccctcta cgccaaggag
      361 aacatggcca agccggtgat cgggtacgtc gcgggtctca ccgcgccgaa gggccggcgc
      421 atggggcacg cgggggcgat catcagcgcc ttcggcgaca ccgccgcgga aaaggcggag
      481 atgatgcggt tggcgggcct cacggtggcg gccagtgcgg cagagctggg ctcgaccgtg
      541 aaagcggcgc tcgggaagcg gaccctggcc gcgcgatgac cgccagaccc gcggtcgtcg
      601 tcacccgacg gctccccgag ccggtcgagc gcgagctcca gaacgacttc gacgcgacgc
      661 tcaacgccga ggaccgtccg ctcgggcccg acggcctccg ccgcgcgctc caatcggcgg
      721 acgccctcct ctgcacggtg accgaccggc tcacggccga ggtgctggac gtggagcccc
      781 ggcgggcgcg gctgctggcc aacttcgggg tcggcttcaa ccacatcgac gtcgaggcgg
      841 cgcggcagcg ggggctggcg gtcagcaaca cgcccgacgt gctgaccgac gccaccgccg
      901 acatcgcgat gaccctgctc ctcggcgtca cccgccgggc cggtgaaggg gagcggcacc
      961 tgcgcgccgg ccagtggacc ggctggcgtc cgacccacat gctcggcacc caggtgagcg
     1021 gcaagaccct cggcctggtg ggcatggggc ggatcgcgcg cgcggtcgcc aagcgggcgc
     1081 accaggggtt cgagatgaag gtgatctttc acgaccccta cccgccgccg cccgacgtcg
     1141 cccgggcgct gggggccgag ccccgggagc gcctggagca ggtgctggag gaggccgatt
     1201 tcgtctcgct ccactgtccc gcgacaccgg agacccggca cctcatgaac gccgagcgcc
     1261 tcgcgctgct caaaccgggc tcgtacctga tcaacacggc gcggggcgac gtggtggacg
     1321 aggcggcgct ggtcgccgcg ctccgagggg ggcggttggc cggggcgggg ctcgacgtgt
     1381 acgagcgcga gccccaggtc tcacccgagc tgctcgcgat ggagaacgtg gtcctcctcc
     1441 cccacctcgg aagcgccacg cgcgagaccc ggatcgccat gggcatgcgc gcgctggaga
     1501 accttcgcct cttcttccag ggtaaacccc tccgggacaa ggtcgtgtga cccaggcagg
     1561 tcccgagccg ttcgccgcgg gcgccctccc ggagtccgcg gatccggccg ccgccagcgc
     1621 ggccgcctac gccaccgagg tcgtcgagct gctgtcggcg ctgctgctgc agctcgcgcg
     1681 tgagcggcag cccgacatcg agccgctgct ccggggcgag ggcgacgtga ggagcgtgag
     1741 ccccgacgtg gtcgcccggg cgctgcaggt gcaggggatc tggttccagc tgctcagcat
     1801 cgcggagcag aacgcagcca tgcggcggcg gcggcaggtc gaggcggagc ggggccacga
     1861 gcagctccgc ggcaccttcg ccaacgtcgt ctccaccgcg gcggcggcgg gcatccccgc
     1921 ggcggacatc cacgggttgc tggctcagct ccgcgtgcga cccgtcatca ccgcccatcc
     1981 caccgaggcc aagcgggtca ccgttctgga gaagcaccgc cggatctatc gccggctggt
     2041 ggagctggag tcaccccgct ggacgccccg ggagcgccag gcgctggtgg acggcctccg
     2101 caacgacatc gagctgctct ggctcaccgg cgagctgcgg ctggcgaagc ccaccgtccc
     2161 ccaggaggtc tactggggac tccacttctt caacgagacg ctcttcgaag cggtgcccga
     2221 tctgctggaa aaggtcgagc gggcgctccg gcagtactac ccgggcgagc ggttcgaggt
     2281 ccccaccttc ttccagttcg ggtcgtggat cggcggcgat cgcgacggta acccgttcgt
     2341 caccaacgag gtcacccgga cgacactgct ggagaaccgg ctcaccggcg tgcgccgcta
     2401 tcaccggcgg ctgagcgacc tcgtgcggct cctgagcatc accgagcgct cgatcccgcc
     2461 gtccgagcgg ttccgccagg cgctcgaacg ggagctcgcc gcgaccggcg agggggacgc
     2521 gatcgccggc cggaatccgg gcgagatcat ccggcagtat ctggcgacca tgctgcgacg
     2581 gctggaggtg atgatccgcg ccaccgagcg gggcgacgcc cgggtggatc ccgccggcta
     2641 cgcctccgcc gacgcgctga tcggcgacct gcggctcatc gagagcgagc tgatcgactc
     2701 cgggcgacgc gagatcgcgg aggcgctggt tcggccggtg cggcgcgagg tggaggcgtt
     2761 ccggttcagc
//
LOCUS       DASUYN010000434         2028 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_791710, whole genome shotgun sequence.
ACCESSION   DASUYN010000434 DASUYN010000000
VERSION     DASUYN010000434.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2028)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2028)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2028
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_791710"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..945
                     /gene="carB"
                     /locus_tag="VF061_08530"
     CDS             <1..945
                     /gene="carB"
                     /locus_tag="VF061_08530"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683457.1"
                     /note="four CarB-CarA dimers form the carbamoyl phosphate
                     synthetase holoenzyme that catalyzes the production of
                     carbamoyl phosphate; CarB is responsible for the
                     amidotransferase activity; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl phosphate synthase large subunit"
                     /protein_id="HEX6669588.1"
                     /translation="GTRCVIGGVMQHIEDAGIHSGDSACVLPPYLITEPQVEEMRRHT
                     RAFAERLGVVGLINVQYAIKNGTVYVLEVNPRGSRTVPFVSKTTGVPLASLAAAVMAG
                     RTLDELGLQDDVLQPYVAVKEAVFPFTKLAGVDLVLGPEMRSTGEVMGIADSFGMAFA
                     KAQISADGALPLEGGVFLTVNDHDKANLVPIARRFHGLGFRLYATDGTARYLRARGIP
                     AERVLKVHEGRPNAIDLLVSDRIQLLINTPLGKLTQQDDYSIRRAALQHRVPYTTTLS
                     AASAACDAIIALRSRAGEVRSLQEWHVLAREMSPEWTG"
     gene            933..1916
                     /gene="murB"
                     /locus_tag="VF061_08535"
     CDS             933..1916
                     /gene="murB"
                     /locus_tag="VF061_08535"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: protein motif:HMM:NF010480.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008762 - UDP-N-acetylmuramate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HEX6669589.1"
                     /translation="MDRLTARDPGFAAAVRGAIRGLVRESEPLARYSTYRIGGPATVV
                     LPASGEDVGTAIRMAHEAGIPWFALGLGSNILLPDEGLDALVVRLGKGMDRLDRDGDR
                     WVIGAGLPAPLAARRTAAAGFAGLHIFVGVPGTVGGGVYMNAGCHGGDWSEVVETVTV
                     IDESGRDAVLPRAEVPFTYRRSGLDRRVVVETAVRLRPEEQHRLDEQIAEMFEWRQQG
                     TPFNQPCCGSVFKNPHGPSWKQEGAPRTAGQLVEAAGLKGLRVGGAEVSPMHANYFVN
                     TGEATAADVRGLIVEVQRRVEQAFGARLEPEVKIIGPRGEYVDLHSVKGEQ"
BASE COUNT          289 a          718 c          724 g          297 t
ORIGIN      
        1 ggcacccgct gtgtcatcgg cggagtgatg cagcacatcg aggacgccgg catccactcg
       61 ggcgactccg cctgcgtcct cccgccctac ctcatcaccg agccgcaggt ggaggagatg
      121 cgacggcaca cccgtgcctt cgccgagcgc ctgggggtgg tgggtctgat caacgtgcag
      181 tacgccatca agaacggcac ggtgtacgtg ctggaggtca atccccgcgg ctcccgcacg
      241 gtgccgttcg tctccaagac cacgggcgtg cccctggcct cgctcgccgc cgcggtcatg
      301 gcgggccgga ccctcgacga gctcggcctc caggacgacg tgctccagcc ctacgtcgcg
      361 gtgaaggagg ccgtgtttcc cttcaccaag ctggccggcg tggacctggt gctcgggccc
      421 gagatgcgct cgaccggcga ggtcatgggc atcgcggact cgttcggcat ggccttcgcc
      481 aaggcgcaga tctccgccga cggggccctg ccgctggagg gcggcgtgtt cctcacggtc
      541 aacgaccacg acaaggccaa cctggtcccc atcgcgcggc ggttccacgg gctggggttc
      601 cggctctacg ccaccgacgg gaccgcgcgc tacctccggg cgcgcggcat cccggcggag
      661 cgggtgctca aggtgcacga gggccggccc aacgcgatcg acctgctggt ctccgaccgc
      721 atccagctgc tgatcaacac cccgctgggg aagctcaccc agcaggacga ctactccatc
      781 cgccgggccg cgctccagca ccgggtgccc tacaccacca ccctctccgc cgcctccgcg
      841 gcctgcgacg ccatcatcgc gctccggagc cgtgcgggtg aggtccggtc gctgcaggag
      901 tggcacgtcc tcgcccggga gatgtcgccc gagtggaccg gctgacggcg cgggatcccg
      961 gcttcgcggc cgcggtgcgg ggcgcgatcc ggggactggt gcgggagtcg gagccgctgg
     1021 cccggtattc cacctaccgg atcggcggcc cggccacggt cgtgctgccc gcgtcgggcg
     1081 aggacgtggg gaccgcgatc cggatggcgc acgaggcggg gattccctgg ttcgcgctcg
     1141 ggctgggctc gaacatcctg ctgccggacg agggcctcga cgccctggtg gtgcgcctgg
     1201 ggaagggcat ggaccggctg gaccgcgacg gcgaccgctg ggtcatcggc gcgggccttc
     1261 ccgcgccgct ggccgcccgc cgaaccgcgg ccgcgggctt cgcgggcctc cacatcttcg
     1321 tcggtgtgcc cggcacggtc ggcggcggcg tgtacatgaa tgccggctgc cacgggggcg
     1381 actggtcgga ggtggtggag acggtgacgg tcatagacga gtcgggccgc gatgccgtgc
     1441 tcccgcgggc ggaggtgccc ttcacctacc ggcgcagcgg cctcgaccgg cgcgtcgtgg
     1501 tggagaccgc ggtgcggctc cgacccgagg agcagcaccg gctggacgag cagatcgcgg
     1561 agatgttcga gtggcgccag cagggcacgc cgttcaacca gccgtgctgc ggcagcgtct
     1621 tcaagaaccc gcacggcccc agctggaagc aggagggcgc tccccggacc gccggccagc
     1681 tggtcgaggc cgccggcctc aagggtctcc gcgtcggcgg cgcggaagtc tcgccgatgc
     1741 acgccaacta cttcgtgaac accggcgagg cgacggccgc ggacgtgcgg gggctgatcg
     1801 tcgaagtcca gcgccgggtg gagcaggcgt tcggcgcccg gctggagccc gaggtgaaga
     1861 tcatcggccc gcggggggag tacgtcgacc tacacagcgt gaaaggtgaa cagtgaaaag
     1921 tgaaagggcg aatcgatccc ccttttcact tttcactgtt cacctttcac gctcttccta
     1981 aaccgagccc ttcacggcct cctacgccat ggcttcctac ttcgccca
//
LOCUS       DASUYN010000435         2254 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_573648, whole genome shotgun sequence.
ACCESSION   DASUYN010000435 DASUYN010000000
VERSION     DASUYN010000435.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2254)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2254
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_573648"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            153..1196
                     /locus_tag="VF061_08540"
     CDS             153..1196
                     /locus_tag="VF061_08540"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: protein motif:HMM:TIGR00747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0033818 -
                     beta-ketoacyl-acyl-carrier-protein synthase III activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HEX6669590.1"
                     /translation="MVGGMGGNITSCMPQTPREGPRRAAITGVATYVPERVVTNAELA
                     RTLDTSDEWIVTRTGIRERRIGAPGETTSSMGAEAVRRLMAARGLGPEDVDALIVATV
                     TPDMLFPATACLIQDRLGLGRVWGFDLSAACSGFLYALTTGAQFVASGAHRRVVVVGA
                     DLMSAIIDPLDRTTAVLFGDGAGAVLLEEAEPGFGLLDFHHVVDGSGRDDLLMPAGGS
                     LKPASAATVAAREHFLRQNGRTVFKFAVSQMAQSVERLLGRHGLTAADVTVVIPHQAN
                     QRILDATADRLGLPRERMASVIARYGNTTAATLPLALEEVVRTGRLGRGDLVVFVAVG
                     AGFTVGASLVRWG"
     gene            complement(1215..2090)
                     /locus_tag="VF061_08545"
     CDS             complement(1215..2090)
                     /locus_tag="VF061_08545"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX6669591.1"
                     /translation="MKSRALGAGAPAVPVVGYGGMHLSLQERPPERESIEVIRAALDA
                     GVRLIDTADVYCRDESDLGHNERLVAEALRGWRGPGDDVLVATKGGLTRPGGRWENDG
                     RPEHLRAACDRSLRALGVERIALYQLHAPDPAVPFEESIGALADLRRAGKIRWVGLSN
                     VSVPQIRSAEAIVPVASVQNRLNPFFREALAEGVVSYCAERGIGFLAYSPTGGGRLNR
                     KLPQHPLLRPMAARLGVSAHALALAWVLSTSPAVIVIPSARRAAHALDSIGAGGLGLT
                     AEDLGAITRAEFSRA"
BASE COUNT          313 a          799 c          840 g          302 t
ORIGIN      
        1 ccagctcgct ccccgcccgc gccagcgccg ccacctggcg tacggtggcg gcgacggccg
       61 cggtatcggt gttcgtcatg gactgcacca cgatggggtg ccccgagccg acgggcaccc
      121 cgcccacgcg gacggtcacg gtggagcggc ggatggtggg cggcatgggc gggaatataa
      181 cttcgtgcat gccgcagacc cctcgcgagg gaccccgccg cgccgccatc accggagtcg
      241 cgacctacgt tcccgagcgg gtggtcacca acgccgagct cgcccgcacg ctcgacacct
      301 ccgacgagtg gatcgtcacc cggaccggca ttcgcgagcg ccggatcggc gccccgggcg
      361 agaccacttc gagcatgggc gccgaggcgg tccgccggct gatggcggcc aggggcctgg
      421 gaccggaaga cgtggacgcc ctcatcgtcg ccacggtcac gcccgatatg ctgtttcccg
      481 cgaccgcctg cctgatccag gatcgcctcg gcctgggccg ggtgtggggc ttcgatctct
      541 ccgccgcctg ctcgggcttt ctctacgccc tcaccacggg cgcccagttc gtcgcctcgg
      601 gggcgcatcg ccgcgtggtc gtggtgggcg ccgacctcat gagcgcgatc atcgacccgc
      661 tcgaccgcac gacggccgtc ctcttcggcg acggtgccgg cgccgtcctg ctggaggagg
      721 cggagcccgg cttcggtctg ctcgacttcc accacgtggt ggacgggagc gggcgcgacg
      781 acctgctgat gccggccggc ggaagcctca agcccgcgag cgcggcgacg gtggcggccc
      841 gggagcattt tctccgccag aacgggcgca cggtcttcaa gttcgccgtg tcgcagatgg
      901 cgcagagcgt ggagcgactg ctcgggcggc acgggctcac cgccgccgac gtcacggtcg
      961 tgatcccgca ccaggccaac cagcggattc tggatgccac agcggaccgg ctggggcttc
     1021 cgcgggagcg catggcctcg gtgatcgcgc gctatgggaa caccaccgcg gcgaccctgc
     1081 cgctggcgct ggaggaggtg gtgcggacgg gccgactcgg ccggggggat ctggtggtgt
     1141 tcgtggcggt gggcgcgggc ttcaccgtcg gcgcgtcgct ggtgcggtgg gggtgaggcg
     1201 gaaggggccg tcagctacgc ccgggagaac tccgctcggg tgatcgcccc cagatcttcg
     1261 gccgtgagcc ccagcccccc ggccccgatg ctgtccagcg cgtgcgccgc ccgccgggcg
     1321 ctcgggatga cgatcaccgc cggcgacgtc gagagcaccc aggcgagcgc cagcgcatgg
     1381 gccgagacac cgaggcgcgc ggccatgggc cgcagcagcg gatgctgggg gagcttccgg
     1441 ttgagccggc caccgccggt cgggctgtac gccaggaacc cgatcccgcg ctccgcgcag
     1501 taggacacga cgccctccgc cagcgcctcc cggaagaagg gattcagccg gttctgcacc
     1561 gacgcgacgg gcacgatcgc ctcggcggaa cggatctggg gcacggagac gttggagaga
     1621 ccgacccagc ggatcttccc tgcccggcgc aggtccgcca gtgcgccgat gctttcctcg
     1681 aagggcacgg ccggatcagg ggcatggagc tgatagaggg cgatgcgctc gacgccgagg
     1741 gcgcgaaggg aacggtcgca cgcggcgcgg aggtgctcgg ggcgaccatc attttcccag
     1801 cgtcctcccg gccgggtcag cccgcccttg gtggcgacca ggacgtcgtc accaggaccg
     1861 cgccacccgc ggagcgcctc cgcgaccagc cgctcgttgt gtccgagatc cgactcgtcc
     1921 ctgcagtaga catcggcggt gtcgatgagg cggacgcccg catcgagcgc ggcgcggatc
     1981 acctcgatgc tctcccgctc gggcggtcgc tcctggaggg acaggtgcat cccgccgtag
     2041 ccgacgacgg gcaccgcagg ggcgcccgcg cccagggcgc gggacttcat caggcgaggg
     2101 gggaggtcag gcgagaccga gttggcggat gagccggcgc cagtcctgcg ccgacacgac
     2161 gccctgctcg aagagcggcg tgagcgtggc gaggatctcg gctcgggagc cgtcgatacg
     2221 gcggtcgcgg agctcgccga tcatccgcgc gaac
//
LOCUS       DASUYN010000436         2895 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1016270, whole genome shotgun sequence.
ACCESSION   DASUYN010000436 DASUYN010000000
VERSION     DASUYN010000436.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2895)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2895)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2895
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1016270"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..806
                     /locus_tag="VF061_08550"
     CDS             <1..806
                     /locus_tag="VF061_08550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX6669592.1"
                     /translation="GEIRVPGSVRIAYYRQDLAQVPQDRTLYQIIADLRPAWGRGPIQ
                     GHLGRFGFTGDSVQRRAASLSGGETARVALAMIMLSGANFLIFDEPTNHLDVESIEAL
                     EDAIEEYDGTVLLVSHDRALLRALTTRTWVLHDARIADFDGGFGEWEVASAEREHAAA
                     VAAAEEQALRKVRERQATRRPPDDRRRRHSERRSAERAVAEAERRVAERERRVEELRG
                     RLEDPALYLTPDGAAQAHRLGAELETARAELEAAFAEWEAATRAMEATG"
     gene            827..2005
                     /locus_tag="VF061_08555"
     CDS             827..2005
                     /locus_tag="VF061_08555"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX6669593.1"
                     /translation="MLGLLALAEVLGMSLWFSASAVSGQYRTLWQLTSGEAAWLTTAV
                     QLGFVVGTGGAAILNLADVVASRWYFAASALLGAAANAALAWAPDYPTALACRFATGV
                     CLAGVYPPAMKMAATWFRSDRGLAIGIIVASLTVGKAMPYLVRGLDPGGVRGVVLAAS
                     AGAVLSAMLVGVGYRDGPFEFPRRPFSWRLVASVLRHRETRLATGGYLGHMWELYAMW
                     TWVPAFLAASVAAGAGDAGATGSTVSLLAFAAIAAGGAGAVWGGWAARRIGYARVVTL
                     AMAVSGVCSLLVGLFFGGTLWLLGPLVLLWGFFVVADSAQFSAMVTELSPSHAVGTAL
                     TLQTSLGFLLTMVTIQLIPMLAQTVGWPLAFPVLALGPAAGIAAIRRLGSRFAPAARP
                     "
     gene            2087..2677
                     /locus_tag="VF061_08560"
     CDS             2087..2677
                     /locus_tag="VF061_08560"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX6669594.1"
                     /translation="MNVRDQLLEAAVRVYAEGGYHGATTRRIAAAAGVNEITLFRHFG
                     SKDVLLQAALAHCQAEGAVPLPEQPLDPLPELTAWSRSHLLHLQQRAALIRTCLGEFA
                     ERPELVTPEISCPVQATRALAAYLERLQEQSLSAERFDPRAAAAMLLGTLFADAIGRD
                     IVPDMYAVPTEEALTQYVTLFLRGIGVETSTPRSSA"
     gene            2674..>2895
                     /locus_tag="VF061_08565"
     CDS             2674..>2895
                     /locus_tag="VF061_08565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669595.1"
                     /translation="MRFAIPLTLLVVAVALPVRAQQTGAPSARPLSLEEALDLAERES
                     ELVGLARSGLAQAEGERRQARSAYFPQLTG"
BASE COUNT          363 a         1054 c         1031 g          447 t
ORIGIN      
        1 ccggcgagat ccgcgtcccc ggctcggtgc gcatcgccta ctaccggcag gacctcgccc
       61 aggtgcccca ggaccgaacc ctctaccaga tcatcgccga tctccgcccc gcctggggcc
      121 gcggcccgat ccagggccac ctcggccggt tcggcttcac cggcgactcg gtgcagcgac
      181 gggcggcatc gctctcgggg ggcgagacgg cgcgagtggc cctggcgatg atcatgctgt
      241 ctggcgcgaa cttcctcatc ttcgacgagc ccaccaacca cctcgatgtc gagtccatcg
      301 aagcgctgga ggacgcgatc gaggagtacg acggtaccgt gctgctggtg agccacgacc
      361 gcgcgctgct gcgcgcgctc accacccgca cgtgggtgct ccacgacgcg cgaatcgccg
      421 acttcgacgg cgggttcggg gagtgggaag tggcgagcgc ggagcgggag catgcggccg
      481 cggtggccgc cgcggaggag caggcgctgc ggaaagtccg cgagcgccag gccacgcgcc
      541 gtccccccga cgatcggcgc cgtcgccact cggagcggcg ctcggccgag cgcgcggtgg
      601 cggaggcgga gcgccgggtg gccgagcggg agcggcgggt ggaggagctg cgggggcggt
      661 tggaagaccc ggcgctctat ctcacgccgg acggagcggc ccaggcccac cggctcggcg
      721 cggagctgga gacggcacgc gccgagctgg aggcggcctt cgccgagtgg gaagccgcca
      781 cccgcgccat ggaggccacc ggctgagcca agagcgccga tggcgcatgc tcggcctcct
      841 cgcgctggcc gaggtgctgg ggatgtcgct ctggttctcc gccagcgccg tctccgggca
      901 gtaccgcacg ctctggcagc tcacgtccgg cgaggccgcc tggctcacca cggcggtgca
      961 actcggcttc gttgtcggca ccggcggggc ggcgatactc aacctcgccg acgtcgtcgc
     1021 ctcacgctgg tatttcgcag cctccgcgct gctcggagcc gctgccaatg cggcgctggc
     1081 ctgggcgccg gactatccca ccgcactggc gtgccgcttc gccaccggcg tgtgcctggc
     1141 cggggtctat ccgcccgcca tgaagatggc cgccacctgg ttccgcagcg atcgcgggct
     1201 cgcgatcgga atcatcgtcg catcgctgac cgtggggaag gcgatgccgt acctggtacg
     1261 ggggctcgac cccgggggcg tccggggcgt cgtgctcgcg gcgtcggcgg gcgccgtcct
     1321 ctccgcgatg ctcgtgggag tcggctaccg agacggaccg ttcgagtttc cccggcggcc
     1381 tttctcctgg cgcctggtgg cgagcgtgct gcggcaccgg gagacgagac tcgcgaccgg
     1441 cggctacctg ggtcacatgt gggaattgta tgccatgtgg acctgggtac cggcattcct
     1501 cgccgccagc gtcgcggcgg gggcgggtga cgctggtgcg accggctcca ccgtgtcgtt
     1561 gctggcgttc gccgccatcg ccgcgggcgg cgccggtgcc gtctggggag gctgggccgc
     1621 gaggcgcata ggctacgcga gggtggtcac actcgccatg gccgtgagcg gggtctgctc
     1681 gctgctggtc ggcctcttct tcggaggcac cctctggctc ctgggcccgc tggtcctcct
     1741 ctggggattc ttcgtggtcg cggactcggc gcagttcagc gctatggtca ccgagctgtc
     1801 gccctcgcac gccgtcggga cagcgctgac cttgcagacc tcgctcggct tcctgctgac
     1861 gatggtcacc atccagctga tcccgatgct ggcccagacg gtcggctggc cgctcgcctt
     1921 tccggtcctc gcgctcggtc ccgccgccgg catcgctgcg atccgccggt tggggagccg
     1981 gttcgctccc gccgctcgcc cctgaggacc gcggcccgcc aaccgaaatc caccgcctgc
     2041 aagtgcctgc ttgcctcgag aggtcatcct ttctatactc gcgcccatga acgtgaggga
     2101 tcagctcctc gaggccgcgg tgcgggtcta cgccgaaggc ggctaccacg gcgccaccac
     2161 ccgccgcatt gcggcggccg ccggggtgaa cgagatcacg ctcttccggc acttcggcag
     2221 caaggatgtg ctcctgcagg cagcattggc ccactgtcag gccgaaggtg cggtgccgct
     2281 gcccgagcag cccctcgacc cgctgccgga gttgaccgcc tggagccggt cccacctcct
     2341 ccacctccag cagcgcgcgg ccctgatccg cacctgtctc ggcgagttcg ccgagcgacc
     2401 cgagctggtg acccccgaga tcagctgtcc ggttcaggcg acccgggccc tcgccgccta
     2461 cctcgagcgt ctccaggagc agagtctctc cgccgagcgg ttcgatcccc gggcggcggc
     2521 ggcgatgctg ctggggacgc tcttcgccga cgccatcggc cgggacatcg ttcccgacat
     2581 gtacgccgtt cccaccgagg aggcgctgac gcagtacgtc actcttttcc tgcgagggat
     2641 cggcgtggaa acgagcaccc cgcggagcag tgcatgagat tcgccatccc cctcacgctc
     2701 ctggtcgtcg ccgtcgccct gccggtgcgg gctcagcaga ccggggcccc gtccgctcga
     2761 ccgctttcgc tggaggaggc gctcgacctc gccgagcgcg agagcgagct ggtgggcctg
     2821 gcgcggagcg gcctggccca ggccgagggc gagcgccggc aggcccggag cgcctacttc
     2881 ccgcagctca ccggg
//
LOCUS       DASUYN010000437         2094 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1016451, whole genome shotgun sequence.
ACCESSION   DASUYN010000437 DASUYN010000000
VERSION     DASUYN010000437.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2094)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2094)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2094
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1016451"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..755)
                     /locus_tag="VF061_08570"
     CDS             complement(<1..755)
                     /locus_tag="VF061_08570"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX6669596.1"
                     /translation="MDRVAGITSTGSKRPAALFGAAGESLSLRMTRSSGCRVWDSEGR
                     EYLDYLMALGAVALGYGHPAVTAAVTDAAHQGVVGPLPPVLEEALAADLCRAMPWLER
                     VRFLKTGAEAVAAAVRLARVLTGRDAVLGCGYHGWLDWCQTAEGRGVPASTRALYGEL
                     PFNHPERTRELIRAAGDRLAAVVFEPVILEPPTAEWIAVLREETLRAGAILIADEIKT
                     VCRLAVGGGCERYGIRPDLVVVGKAIANGLPLAA"
     gene            complement(757..>2094)
                     /locus_tag="VF061_08575"
     CDS             complement(757..>2094)
                     /locus_tag="VF061_08575"
                     /inference="COORDINATES: protein motif:HMM:NF018190.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA];
                     GO_process: GO:0016052 - carbohydrate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-binding protein"
                     /protein_id="HEX6669597.1"
                     /translation="TLAHNAPLLDGASQPPADAECAAFGESEDWAWARGRYGHFIRTV
                     VAGPRYLLDVLELSAPEEHRVELPWHPNATPVEPPGRWESEPGGGEFVSRFERFVPAA
                     AGPIVLRATGAEGSTLSLHLDAGAELLRAEGPGLPGAGAPALFYLQRARGSGLRLVTV
                     VEPAGSAPYVRGWRAIGELIEVETLGGVERHVNTSDGWEVTAESGRAELGGLRRTAPK
                     PAGPLIDHARRTPMTGVAPGSHEPPVLDGTLDAFDFSAPLELDHEDQYRRSEEPYGGP
                     EEFSASAAVQWDDHGIYVGVDVRKPELRVRSADAPRLHLDNEPDDIHADGVQLYLRPT
                     PDGPVYGFLVVPSGEDGSIRVRPTAGTRGDPAMVRGAWQPTEQGYTITIGIALPEWSP
                     LPGHEIGFDLLVNRIEEGRERRSGQLVWSGGGGWVYLRGDRQDPSALGVLELR"
BASE COUNT          296 a          791 c          741 g          266 t
ORIGIN      
        1 gcggcgagag gaaggccgtt cgcgatggcc tttcccacta ccacgagatc cggccggatc
       61 ccgtaccgct cgcaaccgcc gcccacggcg aggcggcaga ccgtcttgat ctcgtccgcg
      121 atcaggatcg cgccggcccg cagggtctcc tcgcggagca ccgcgatcca ctccgccgtc
      181 ggcggctcga gaatcacggg ctcgaacacc acggcggcga gccggtcgcc ggcggcgcgg
      241 atcagctcgc gggtacgctc cgggtggttg aacgggagtt cgccgtacag ggccctggtg
      301 gaggccggca ctcccctgcc ctccgctgtc tggcaccagt cgagccagcc gtggtaaccg
      361 caccccagta ccgcgtcgcg gccggtgagc acgcgggcca ggcgcaccgc ggccgccacc
      421 gcctcggcgc cggtcttgag aaagcgcacc cgctcgagcc acggcatcgc gcgacagaga
      481 tcggcggcca gcgcctcctc caggaccggc ggaagcggcc ccaccacgcc ctggtgcgcc
      541 gcgtcggtga cggccgcggt caccgcggga tgtccatacc cgagtgccac cgcacccagt
      601 gccatgaggt agtcgagata ctcgcggcct tcgctgtccc acactcggca gccggacgag
      661 cgggtcatcc ggagcgagag cgactccccc gccgccccga acagcgcggc ggggcgtttg
      721 ctgccggtgg acgtgatgcc ggcgacgcga tccatgtcag cgcagctcca ggacgccgag
      781 ggccgacggg tcctggcggt cgccacggag gtatacccag ccgccgccgc cgctccagac
      841 cagctgcccc gagcggcgct cccgtccctc ctcgatccgg ttgaccagga gatcgaaccc
      901 gatctcgtgc ccgggcagag ggctccattc gggaagcgcg atgccgatgg tgatggtgta
      961 gccctgctcg gtgggctgcc acgccccccg caccatcgcg gggtcccccc gggtgccggc
     1021 ggtcggccgc acgcggatgc ttccatcctc tcccgagggc actacgagga agccgtacac
     1081 ggggccgtcc ggcgtgggac gcagatacag ctgcacgccg tccgcgtgga tgtcgtccgg
     1141 ctcgttgtcg aggtggagcc gcggggcgtc ggcgctccgg acccggagct cgggctttcg
     1201 cacgtccacc cccacataga tgccgtggtc gtcccactgt accgcggcgg aggcggagaa
     1261 ttcctcgggg ccgccgtacg gctcctcact ccggcgatac tggtcctcgt gatcgagctc
     1321 gagcggcgcg gagaagtcga aggcgtccag ggtgccgtcc agcaccggag gctcgtgcga
     1381 cccgggcgcg acaccggtca tgggcgtgcg ccgggcatga tcgatcagcg gccccgccgg
     1441 cttgggcgcc gtccggcgca atccgcccag ctccgcgcgt ccgctctcgg ccgtcacctc
     1501 ccacccatcg ctggtgttca cgtggcgctc gacgccgcca agggtctcga cctcgatgag
     1561 ctcaccgatc gcacgccagc cgcggacgta tggcgcggag ccggccggct ccaccacggt
     1621 caccaggcgc agaccggagc cgcgggcgcg ctggaggtag aacagggccg gcgctcccgc
     1681 acccggcagg cccggcccct ccgcgcgcag cagctcggcg ccggcgtcga ggtggagaga
     1741 gagcgtggag ccctcggcgc cggtggcccg gaggacgatc ggtccggcgg ccgcgggcac
     1801 gaagcgctcg aaccggctca cgaattcgcc gccgccgggc tccgactccc agcggccggg
     1861 aggctcgacc ggcgtggcat tgggatgcca cggcaactcc acccgatgct cctccggcgc
     1921 ggagagctcc agcacgtcga gaagataccg gggcccggcc accacggtgc ggatgaagtg
     1981 cccatagcgc ccgcgggccc aggcccagtc ctcggactcc ccgaacgcgg cacattccgc
     2041 gtcggccggc ggctgcgagg cgccgtccag gagcggggcg ttgtgcgcca gcgt
//
LOCUS       DASUYN010000438         2916 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_132794, whole genome shotgun sequence.
ACCESSION   DASUYN010000438 DASUYN010000000
VERSION     DASUYN010000438.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2916)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2916)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2916
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_132794"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..397
                     /locus_tag="VF061_08580"
     CDS             <1..397
                     /locus_tag="VF061_08580"
                     /inference="COORDINATES: protein motif:HMM:TIGR00149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="secondary thiamine-phosphate synthase enzyme
                     YjbQ"
                     /protein_id="HEX6669598.1"
                     /translation="FHTRQRQEIIDITDQVEAQVQASGVREGFVLVSAMHISASVFVN
                     DHESGLWHDILAWLEDTVAPWDPPRYRHNETGEDNAAAHLRSLTVGHEVIVPITGGQL
                     DFGPWQRVFYGEWDGQRRKRVIVKVMGER"
     gene            complement(381..2228)
                     /locus_tag="VF061_08585"
     CDS             complement(381..2228)
                     /locus_tag="VF061_08585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669599.1"
                     /translation="MSKPKQRWTAGFAQAVAATLSGGAALVSILSYTSSAGLSVPGAP
                     SLAARAHSVTLSPAVDTATAVGDTIQLAAVITDSGGTVLAGVAPVWISGDPSIAEVSP
                     AGSVTSRGAGVTWITVRVGTVETRARLVVLQRPAALVLDDTLLHVPEGERIPLNARVV
                     DARGNAIVGADVTWSAPDPAVARVEGADAVGVIPGRTSLVAMAGPLQAALPVEVVPVA
                     GSITVLGGDGQRGPAGAPLPVPITAQIVSRSGRPLPGVLARFHADAPGATVDRALDTS
                     DARGMVKTSWRMGEVPGRQQLSISVEGVSVVPVVGAEADPVPANAKVEIASAGLGGVV
                     GDTLGEPVAIRVSDSLGRALADLPVAWTPLDGGALTPHAPRTDSLGEARATWRLGSKS
                     GRQRARVQVGNARTMPPASLIAQAQPGPAAAVHAVSGDRQTGSVGQPLAQPIVLRTTD
                     RHGNPVAGAGLRLLPAAGRPGDSVLTVDSTGRARVTWTLGRTAGLQRMVVRLDGDTAE
                     TELSAVARPGKAVKLAFVRPPETGIAGRPLPKPLVVQVSDAYGNPLGGQTVMFKATSG
                     SVAPGRGLTGADGRTTVRWVLGPKSKKPELSGTVASTGVKASVVLSARP"
     gene            complement(2515..>2916)
                     /locus_tag="VF061_08590"
     CDS             complement(2515..>2916)
                     /locus_tag="VF061_08590"
                     /inference="COORDINATES: protein motif:HMM:NF017038.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEX6669600.1"
                     /translation="YVGGFKAGLMTISGGRLFGARMAMPEDAAAPRRVAEAQPFTPDG
                     KLTFGKLDAVFKSGNATRDTIPSHLLVGPDVSGEVAEFYTHVCPAGVYERVGDEIRVN
                     APNCIDCKATDILGPRWTPREGGSGPKYRLM"
BASE COUNT          407 a         1097 c         1023 g          389 t
ORIGIN      
        1 gtttcacacc cggcagcgcc aggagatcat cgacatcacc gaccaggtcg aggctcaggt
       61 ccaggccagc ggcgtgcgcg agggattcgt gctcgtgtcc gccatgcaca tcagcgcctc
      121 ggtcttcgtc aacgatcacg agtcggggct gtggcacgac atcctcgcgt ggctggagga
      181 caccgtggcc ccctgggacc cgccgcgata ccggcacaac gagaccggcg aagacaacgc
      241 ggccgcgcat ctccggagcc tgaccgtggg gcacgaggtg atcgtgccga tcacgggcgg
      301 gcaactcgat ttcggtccct ggcagcgggt gttctacggg gagtgggacg gtcagcggcg
      361 caagcgggtg atcgtcaagg tcatgggcga gcgctgagca ccacgctggc cttgacgccg
      421 gtggacgcga cggtgcccga cagctcgggc ttcttcgact tcggccccag gacccagcgg
      481 accgtggtgc ggccgtcggc gcccgtgagg ccgcgccccg gagccacgct cccgctcgtg
      541 gccttgaaca tcacggtctg tccgccgagc gggttgccgt aggcgtcgct cacctgcacc
      601 accagcggct ttggcagcgg ccgtcccgcg atcccggtct cgggcggacg cacgaacgcc
      661 agcttcaccg ccttgcccgg cctcgcgacg gccgagagct cggtctcggc ggtgtctccg
      721 tccagccgga ccaccatgcg ctgcagcccc gccgtcctgc cgagggtcca ggtgaccctt
      781 gcccgcccgg tggaatccac cgtgagcacg ctatccccgg gccggccggc agccggcaga
      841 agccgcagcc cggcgccggc caccggattc ccgtggcggt ccgtcgtccg aagcacgatc
      901 ggctgcgcca gcggctgccc cacggacccg gtctgccggt cacccgagac ggcgtgcacc
      961 gccgcggcgg ggccgggctg tgcctgggcg atcaggctcg ccggcggcat cgtcctcgca
     1021 ttaccgacct gcaccctcgc gcgctgccgt cccgacttcg atcccagccg ccaggtcgcg
     1081 cgagcctcgc ccagggagtc ggtgcgcggc gcgtgcggcg tgagcgcgcc gccgtcgagc
     1141 ggcgtccacg ccaccggcag gtccgcgagt gcccggccga gcgagtcgct gacccggatg
     1201 gcgaccggtt cccccagcgt atcaccgacc actccaccga gcccggcgct cgcgatctcc
     1261 actttcgcgt tggcgggcac cgggtccgcc tctgcgccga cgaccggcac cacactcacc
     1321 ccttccaccg agatggacag ctgctgccgc ccgggcactt cgcccatccg ccaggacgtc
     1381 ttcaccatcc cgcgggcgtc cgaggtgtcc agcgcccggt ccaccgtggc gccgggcgca
     1441 tcggcgtgaa agcgggcgag gacaccgggc agcggtcgcc cgctgcggga gacgatctgc
     1501 gcggtgatgg gcaccggcag cggcgcgccg gcggggccgc gctgcccgtc gccgccgagc
     1561 acggtaatgg agccggcgac cggcaccacc tccaccggca gcgctgcctg gagcggcccg
     1621 gccatggcga ccagcgaggt gcggcccggg atcacgccga ccgcgtcggc tccctccacc
     1681 ctggcgacgg cgggatcggg cgcggaccat gtcacgtcgg cgcccacgat cgcgttgccc
     1741 cgggcgtcca ccaccctggc gttgaggggg atgcgctcgc cttccgggac gtgcagcagg
     1801 gtgtcgtcca gcaccagcgc ggcggggcgc tgcagcacca cgaggcgggc tctcgtctcg
     1861 accgtgccca cccgcaccgt gatccaggtg acccccgccc cccgggaggt gaccgatccc
     1921 gccggactca cctcggcgat ggacggatcc ccgctgatcc agaccggcgc cacgcccgcc
     1981 aggacggtgc cgccggaatc cgtgatcacg gccgcgagct ggatcgtatc gccgacagcc
     2041 gtggcggtgt ccaccgccgg gctcagggtg acgctgtggg cacgcgccgc gagcgaggga
     2101 gccccgggta ccgaaaggcc cgccgagctg gtgtagctca ggatggagac cagggcggca
     2161 ccgccggaga gcgtggccgc caccgcctgg gcgaacccgg cggtccagcg ctgtttgggc
     2221 ttgctcaccg cgtgcgatcc caggctgcac tccttccgcg ggccggccga tgcggttggc
     2281 gggcggtcga acggcaaccg acggggcggc cgacctcggc cacgctcgtc gggcaccacc
     2341 cgccgcccgc cttcgatgtt gggatgcccg gccggatgtg aacgggcgag tcaatctcgg
     2401 gaaggagccc ccgccacaca atccgcagga agcgcacact gtcgagtttc gctgcaacag
     2461 ccgccaccgg cgctgcaagg cgtggcagag gcgatgaccc gcgaggcggc gaggctacat
     2521 caagcgatac ttgggcccgc tgcccccttc gcggggagtc cagcgcggac cgaggatatc
     2581 ggtcgccttg cagtcgatgc agttcggcgc gttgacccgg atctcgtcac ccacccgctc
     2641 gtacaccccg gcggggcaga catgggtgta gaactccgcc acctccccgc ttacgtcggg
     2701 ccccaccagg agatgggagg ggatcgtgtc ccgggtcgcg ttgccggact tgaacaccgc
     2761 gtccagcttc ccgaaggtga gcttgccgtc cggcgtgaac ggctgggctt ccgcgacgcg
     2821 tcgcggggcg gcggcatcct ccggcatcgc catccgggcg ccgaacagcc gtccgccgct
     2881 gatcgtcatg aggccggcct tgaacccgcc gacgta
//
LOCUS       DASUYN010000439         2415 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_132939, whole genome shotgun sequence.
ACCESSION   DASUYN010000439 DASUYN010000000
VERSION     DASUYN010000439.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2415)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2415)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2415
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_132939"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..360)
                     /locus_tag="VF061_08595"
     CDS             complement(<1..360)
                     /locus_tag="VF061_08595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669601.1"
                     /translation="MAVAAVVASACGRQDAARQEGTESATAAEVTATRAAADAPTVAG
                     VMIGRRLGGGSRIVEPTFEFASTDTVFVSVSASGTGTLTAAWRAPDGRVLRQASAPVA
                     ASGENTAFSLDAPKGLKP"
     gene            complement(569..>2415)
                     /locus_tag="VF061_08600"
     CDS             complement(569..>2415)
                     /locus_tag="VF061_08600"
                     /inference="COORDINATES: protein motif:HMM:NF019155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SEC-C metal-binding domain-containing protein"
                     /protein_id="HEX6669602.1"
                     /translation="HKLLQAHVLYEKEVDYLVQDGQVVIVDEFTGRVMSGRRWADGLH
                     QAVEAKEGVQVKGETQTFATITIQNYFRMYDKLAGMTGTAETEETEFYSIYGLEVSVI
                     PTHRPIKRLDQVDRIYKTRKEKHDAIMDEVERLHGLGWPVLIGTVNVDVSETLSRQLK
                     RRGLKHEVLNAKYHQREAEIVAGAGQKGAITIATNMAGRGTDIKLGKDLDLTQPEAGL
                     QIIGTERHESRRIDRQLRGRSGRQGDPGQSIFFLSLEDDLMRLFGSDRIARWMDKSGA
                     EEGEVITGGLVTRAIEQAQKRVELQNFQQRKRLLEYDDVMNQQREVIYSLRLFALERG
                     DELKAEARRMIEAALERVVTQFLSGAERPEEYDRGGLREALTLQYLVTVDELTDPEAA
                     PTVEKMVELAKAEGERAFRRKVEYLGDFGKAIGIPEVDSQVLSQVMLTVLDERWKDHL
                     YDLDQLRNAIQYRAWGQKDPLVEYKREAFEMFQDLMHDIQSTFSERFLKIQVTAEPSR
                     PQQPLPQPPSGDGLGPFGRRMPPAPPGVPSSAPSPATAPTATADDLFMGPPPRAAAPA
                     PAPAPAAVASSLGPIGRPGAATVPEVGRNDPCPCGSGKKYKKCHGAGK"
BASE COUNT          319 a          884 c          808 g          404 t
ORIGIN      
        1 gggcttgagg cctttggggg cgtcgaggct gaacgccgtg ttctcgccgg aggcggcgac
       61 gggcgcggac gcctggcgca gcacccggcc atccggcgca cgccaggcgg cagtgagcgt
      121 tccggtaccg ctggcggaga cggagacgaa cacggtgtcc gtggaagcga actcgaaggt
      181 gggctccacg atccggctcc ccccaccgag ccgacgtccg atcatcacgc cggcgaccgt
      241 gggcgcgtcg gccgcggcgc gcgtcgcggt gacctccgcg gcggtcgccg attcggtgcc
      301 ttcctgccgc gcggcatcct gccgcccaca ggcgctggcg accactgccg cgactgccac
      361 ccgccatccc ttcaaagctg tgcgaggcat agggaccccc tgttcaaaag ctgggagact
      421 tcccgcggcc cgtcttccct gcccggcgcc acgagaggtc cgcgcccaag gtaacgcccg
      481 gaaccggacc ccgcccggtc cggacgcaac acggcccccg gaaaccgtcg ggggccgttg
      541 tgcgaatgtc accgccgcga gctgccggtc acttccccgc gccgtgacac ttcttgtact
      601 tctttcccga gccgcaggga caggggtcgt ttcggccgac ctccggcacc gtggcggcgc
      661 cgggccggcc gatcgggccg agcgagctcg caacggcggc cggtgccggc gcgggtgcgg
      721 gcgcggccgc ccggggcggc ggccccatga acaggtcgtc cgccgtggcg gttggcgccg
      781 tggccggcga cggcgcggag ctgggaaccc ccggcggcgc gggcggcatc cgccggccga
      841 acggtccgag gccgtcgccg gagggcggct gcggcagcgg ctgctggggc cgggacggct
      901 ccgccgtcac ctggatcttg aggaagcgct ccgagaacgt ggactggatg tcgtgcatca
      961 ggtcctggaa catctcgaac gcttcccgct tgtactccac cagcggatcc ttctggcccc
     1021 aggcgcgata ctggatggcg ttccgcagct ggtcgagatc gtacaggtgg tccttccagc
     1081 gctcgtcgag caccgtcagc atcacctgcg agagcacctg gctgtccact tccgggatcc
     1141 cgatcgcctt cccgaagtcg ccgagatact ccaccttgcg ccggaacgcc cgctcgccct
     1201 ccgccttggc cagctcgacc atcttctcga ccgtcggcgc ggcctcgggg tcggtgagct
     1261 cgtccaccgt caccaggtac tggagcgtga gcgcctcgcg gaggccgccc cggtcgtact
     1321 cctccggccg ctcggcgccg ctcaggaact gcgtcaccac gcgctccagc gcggcctcga
     1381 tcatccggcg cgcctcggcc ttgagctcgt cgccccgctc cagcgcgaac agccgcagcg
     1441 agtagatcac ctcgcgctgc tggttcatca cgtcgtcgta ctcgagcagc cgcttccgct
     1501 gctggaagtt ctgcagctcg acccgcttct gcgcctgctc gatggcccgg gtcaccagcc
     1561 cgccggtgat gacctcgccc tcttcagcgc cgctcttgtc catccagcgc gcgatgcggt
     1621 ccgacccgaa gagccgcatc aggtcgtctt ccagcgacag gaagaagatc gactggcccg
     1681 gatcgccctg gcggccggag cgaccccgga gctggcggtc gatgcggcgg gactcgtgcc
     1741 gctcggtgcc gatgatctgg agcccggcct cgggctgggt gagatcgaga tccttgccca
     1801 gcttgatgtc ggtgccgcgg ccggccatgt tggtggcgat cgtgatcgcc cccttctgcc
     1861 ccgccccggc cacgatttcc gcctcccgct ggtggtactt cgcgttcagc acctcgtgct
     1921 tgagaccccg gcgcttgagc tgccgggaga gcgtctccga cacgtccacg ttgacggtgc
     1981 cgatcaggac cggccagccg agcccgtgca gccgctcgac ctcgtccatg atggcgtcgt
     2041 gcttttcctt ccgggtcttg tagatccggt ccacctggtc gagacgcttg atcggccggt
     2101 gggtgggaat gacgctcacc tcgaggccgt agatcgagta gaactcggtc tcctcggtct
     2161 cggcggtgcc ggtcatcccg gccagcttgt cgtacatccg gaagtagttc tggatggtga
     2221 tggtggcgaa ggtctgggtc tcgcccttga cctgcacgcc ttccttggcc tccaccgcct
     2281 ggtgcagccc atccgcccag cgccggcccg acatcacccg gccggtgaac tcgtccacga
     2341 tcaccacctg gccgtcctgc accaggtagt ccacttcctt ctcgtagagg acgtgggcct
     2401 ggagcagctt gtgga
//
LOCUS       DASUYN010000440         2890 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_792932, whole genome shotgun sequence.
ACCESSION   DASUYN010000440 DASUYN010000000
VERSION     DASUYN010000440.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2890)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2890)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2890
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_792932"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..565
                     /locus_tag="VF061_08605"
     CDS             <1..565
                     /locus_tag="VF061_08605"
                     /inference="COORDINATES: protein motif:HMM:NF013425.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0052855 - ADP-dependent NAD(P)H-hydrate
                     dehydratase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HEX6669603.1"
                     /translation="REAKAVVLDADALVALQGAADELRALGEGRALVLTPHPGEFRAL
                     FPDLASQRELDPWGAAAAAAESAGAVVVLKGVPTVVAAPGRPALTLAAGNPGLATGGS
                     GDVLSGIIGTAMSQELEPRIAAALGAQALGRAADAAVRRVSARSLRPMDVIAALTDLW
                     REWDLLRRSPPAPRPPVLLELPRPLTL"
     gene            583..2145
                     /locus_tag="VF061_08610"
     CDS             583..2145
                     /locus_tag="VF061_08610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669604.1"
                     /translation="MRFASPVLLLVTACAAAAQSPSRDWRVEDRTVIGDFSRITSIAT
                     SMERVYVTSPTSLVIRHPQFQSWSGPFQPPRRDALAGVFIALVDPLDQSLWLARADGW
                     LHYQPELQIWDEGRVPDGVVTIAFDEADPVGGLYIRTRGGWYVLQRGGMVPTPGRPPT
                     RPVRPATVEEVLRQTPTLQTNAAQLMDSRMRPVRFTAAARAFDNQGWYLGTTGLGLLY
                     LQDAAAIPERMPFGLPGRFVGAVISWPGGLWAATNRTPETDAAFTFVESDLREFRTVH
                     GLPATGTPFDRVIELAGRDRSLWAATDFGLARVDPEQERIELFDEGRGLPHSRVLDVA
                     GRQGRIVVGTARGLAGLDDSFRVTRIAPRYADAAYAVFPTSDSVWVGTPRGVFLALPG
                     EEDLERPAGLGSPSLQVPVYGFATMGDTLVALTRDQLIWRDPRTQAWSLGPNLSGLLG
                     RLRRFAADGPGFWVAGDRGVGFARLAAAPARTLREGDLPGPVNDLAVDREHLWVGTED
                     GLVRFRLDAIRP"
     gene            2142..>2890
                     /gene="thiL"
                     /locus_tag="VF061_08615"
     CDS             2142..>2890
                     /gene="thiL"
                     /locus_tag="VF061_08615"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: protein motif:HMM:TIGR01379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009030 - thiamine-phosphate kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HEX6669605.1"
                     /translation="MKPTRASEELGLGPGAEFDRIRDIARILGDRARGLGDDCALLPG
                     DPTTLALSTDVSVEGVHFRLDWIEPAEVGWRSAAAALSDLAAVGADPVGLLAAITVPE
                     GAEETGLTALAGGLGEAAAAVGAPVLGGDLSRGPVWSVAVTVVGRAERPVARAGARPG
                     DGVWVTGVLGGARAAIESWSRGDVPAPDARRAYARPEPRIAAGRWLAAHGAHAMLDLS
                     DGLAADAGHLAAASCVRVRLTLETVPVAPAV"
BASE COUNT          320 a         1056 c         1095 g          419 t
ORIGIN      
        1 gcgggaggcg aaggccgtcg tgctcgacgc ggatgcgctg gtcgccctcc agggtgcggc
       61 ggacgagctg cgggcgcttg gggaggggcg cgcgctcgtc ctgacgccgc accccggcga
      121 gttccgcgcc ctgtttcccg atctcgcctc acagcgcgag ctggatccat ggggcgccgc
      181 agccgcggcc gcggagagcg ccggcgcggt cgtggtgctg aagggcgtcc ccacggtggt
      241 cgccgcgccc ggccggcccg cgctcacgct cgccgccggc aatcccggcc tcgccacggg
      301 gggcagcgga gacgtgctga gcggaatcat cggcaccgcg atgagtcagg agctcgagcc
      361 gcggatagcc gccgccctcg gcgcgcaggc gctgggccgc gcggcagacg cggcggtccg
      421 ccgggtgtcg gccaggagcc tccggccgat ggatgtgatc gccgcattga ccgacctctg
      481 gcgggagtgg gacctgctgc ggcgctcgcc gcccgcgccg cggccgccgg tgctcctcga
      541 gctgccgcgg ccgctgaccc tgtgaccgtg taccttgccc tgatgcgctt cgccagcccg
      601 gtgctgctgc tcgtgacggc gtgcgccgcc gccgcgcagt cccccagtcg cgactggcgg
      661 gtggaggacc gcaccgtcat cggcgacttc agccgcatca cctccatcgc gacctcgatg
      721 gagcgggtat acgtcacctc acccacctcg ctggtcatcc gtcatcccca gttccagagc
      781 tggtccggac cgttccagcc gccgcggcgc gacgcgctcg ccggcgtgtt catcgccctg
      841 gtggatcccc tggaccagtc gctctggctc gcccgggcgg acggctggct gcactaccag
      901 ccggagctgc agatctggga cgagggcagg gtgcccgacg gggtggtgac gatcgccttc
      961 gacgaggcgg atcccgtggg cggcctctac atccgcaccc gcggcgggtg gtacgtgctc
     1021 cagcgcggcg gcatggtgcc gactcccggc cgtcccccga ccagaccggt tcgacctgcc
     1081 acggtggagg aggtgctccg ccagaccccc acgctccaga ccaacgccgc ccagctcatg
     1141 gattcacgca tgcgaccggt gcgcttcacc gcggccgcgc gcgcgttcga caaccagggg
     1201 tggtacctgg gcaccacggg cctcggcctc ctctatctcc aggacgccgc cgcgattccc
     1261 gagcggatgc cgttcggcct cccgggccgg ttcgtgggcg cggtgatcag ctggcccggc
     1321 ggcctgtggg cggcgacgaa tcggacgccg gagaccgacg cggcgttcac cttcgtggag
     1381 tccgacctgc gggagttccg cacggtgcac ggcctgccgg cgaccgggac cccgttcgat
     1441 cgcgtgatcg agctcgccgg tcgtgaccgg tcgctgtggg ctgctaccga cttcgggctg
     1501 gcgcgggtgg atcccgagca ggagcggatc gagctgttcg acgagggcag ggggttgccg
     1561 cacagccggg tgctcgacgt ggccggacgg cagggccgca tcgtggtggg caccgcccgg
     1621 gggctggccg gcctggacga ctcgtttcgg gtgacccgga tcgccccgcg ctacgccgac
     1681 gccgcgtacg ccgtgttccc caccagcgac tcggtctggg tcggcacccc ccgcggcgtg
     1741 ttcctcgcgc tgccgggcga ggaggatctg gaacgccctg ccggtctggg atccccgagc
     1801 ctgcaggtcc ccgtctacgg cttcgcgacc atgggagaca cgctcgtcgc gctcacgcgc
     1861 gaccagctga tctggcgcga cccgcggacc caggcgtggt ccctcggccc caacctgtcg
     1921 ggactgctcg gacggctgcg gcgcttcgcc gcggacggac cggggttctg ggtcgccggc
     1981 gatcgcggcg tcggcttcgc gcggctggcc gcggctcccg ctcggacact gcgcgagggt
     2041 gatctgccgg ggcccgtcaa cgacctcgcg gtggatcgag agcacctctg ggtcggaacg
     2101 gaggacgggt tggtccgctt ccgcctcgat gccatccgcc cgtgaagccg acccgcgcat
     2161 ccgaggagct cggtctcggc cctggggcgg agttcgatcg catccgcgac atcgcccgca
     2221 ttctcggcga ccgcgcgcgg ggcctggggg acgattgcgc gctgctcccc ggcgacccca
     2281 ctaccctggc gctctccacc gacgtgagcg tcgagggggt gcacttccgg ctcgactgga
     2341 tcgagcctgc ggaggtgggt tggcggtccg cggcggccgc gctctctgat ctggcggcgg
     2401 tgggcgccga ccccgtgggt ctcctcgcgg cgatcacggt gccggaggga gccgaggaga
     2461 cgggcctgac cgcgctcgcc gggggcctcg gcgaggcggc cgctgcggtg ggagcccccg
     2521 tgcttggggg agatctgtcg cgcgggccgg tgtggagtgt cgcggtgacg gtagtagggc
     2581 gcgcggagcg gccggtcgcc cgggcggggg cgcggccggg agacggggtg tgggtgaccg
     2641 gcgtgctcgg cggtgcgcgg gccgcgatcg aatcgtggtc ccgcggcgac gttcccgcgc
     2701 ccgatgcccg ccgcgcctac gcgcgcccgg agccaaggat cgccgccggc cgctggctcg
     2761 cagcccatgg cgcccacgcg atgctggatc tcagcgacgg cctcgctgcc gatgcggggc
     2821 acctcgcggc cgcgtcgtgc gtgcgggtcc gtctcaccct ggagacggtc cccgtcgctc
     2881 cagccgtcat
//
LOCUS       DASUYN010000441         3879 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_574799, whole genome shotgun sequence.
ACCESSION   DASUYN010000441 DASUYN010000000
VERSION     DASUYN010000441.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3879)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3879)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3879
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_574799"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..922
                     /locus_tag="VF061_08620"
     CDS             <1..922
                     /locus_tag="VF061_08620"
                     /inference="COORDINATES: protein motif:HMM:NF012695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HEX6669606.1"
                     /translation="VPKPLLKVAGRPVMDWVMDRLDGLDVSELIFITGHLKEQVEAYA
                     RARYRTPSRFIEQKVQDGTAGAVNLARPHVREPVLIIFVDTVFEADLTLINRADADGI
                     IWAKEVEDYQRFGVVVTDAQGYMTRIVEKPSTPVSKLANIGLYYIRAVDSLWQGIDHV
                     LASPKNKGEFFLTDAFQWMIEHGKRILTAEVGGWYDCGAPGTLLETNETLLRLGAARR
                     VDFPGVTIHDPVYIEDGVTIERSEIGPNVCLERGTQVSGSTLRHTIVGRESVITGSTL
                     DGALLGNHVTVQGYRGGASLGDHSEITAKG"
     gene            953..2572
                     /locus_tag="VF061_08625"
     CDS             953..2572
                     /locus_tag="VF061_08625"
                     /inference="COORDINATES: protein motif:HMM:NF017745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF885 domain-containing protein"
                     /protein_id="HEX6669607.1"
                     /translation="MASVDDLCRSYLDLKYHFDPAAASSAGLVSHDARLGRFDAETTR
                     EHLSALRALAGAVEELESDDLQAEIDRTALLGELRNTIHRLEHERPHVRNPAFWLSHV
                     FQGLYAIVSRRDGAVAGRTPAALERLRAVPAFLDVARNTLDEPPSVFVDTALGMLGGG
                     GELVVQLAAALERESPELGADLRSAAGEALEGLKRFGTALRDEVEPAADPHAFAVGEE
                     QFSRRLHHEHALSAGAPELWRYGLHLQEETEAALAALAGTMNGRPWRDLVEELRGDIP
                     ESDALLPVYRAELDRAHAFVEERELVSLPQDPVDVVATPGFLVALVPFAAYEPPPIFL
                     AEQTGRFYVTQPDPSAPAEIRARQRRGHCLHAIPAMVAHEAYPGHHLQLVTAQGLPSE
                     VRRHIWTPVMVEGWALYCEQLMDESGYYGDDQARLFRLVNLLWRAIRIVLDVGLHTRG
                     MSPAEAVDYMVEHLPIERPSAEAEVRRYCAYPTYQLCYAVGRRELLRLRDAYRERAGA
                     SFRPKAFHDELMGYGGLPVTLARWGMELGEE"
     gene            2569..3555
                     /locus_tag="VF061_08630"
     CDS             2569..3555
                     /locus_tag="VF061_08630"
                     /inference="COORDINATES: protein motif:HMM:NF019121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669608.1"
                     /translation="MKITVLTYLDSENENSKEYDPVVPQVARALRKLGHRVSVLGVHG
                     DVKRLIAGLSRRRPELVFNLMEMFGDNVFGDIPVTGLLELLGLDYTGSGPGELYLSQD
                     KGLTKKLLAFEDILYPRFAVFSRDTAFETGGNLRMPLFVKPLRSDASLGIGGKSLVHD
                     ATALMERVSAIRKELDDAALAEEFIDGREFYVGVIGNSQPKALPPVEIDFTGFPEGVP
                     KVMDSKAKWDERSKEYKGTRSVMAQLPDELRARLQKVAVDAYRALRVRDYGRVDLRLT
                     DTGDIYVLEVNASCYLEKASEFAMAANAAGLDYLRLIERIVDLAIARRKKKR"
     gene            complement(3586..>3879)
                     /locus_tag="VF061_08635"
     CDS             complement(3586..>3879)
                     /locus_tag="VF061_08635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669609.1"
                     /translation="IRAIFEDLGPAHGAPGEPLAPAGVLIRRLEPDLLTNVFRWTGHF
                     PERTRVLIRYLAERAEHLRQGYMPAREAAAIVAVTTLVTGLAMNHVQRGSYLP"
BASE COUNT          601 a         1337 c         1374 g          567 t
ORIGIN      
        1 cgtgcccaag ccgctgctca aggtggcggg gcggccggtg atggactggg tgatggaccg
       61 gctcgacggc ctcgacgtga gcgagctgat cttcatcacc ggccatctca aggagcaggt
      121 cgaggcctac gcccgggcgc gctaccggac gccttcgcgc ttcatcgagc agaaggtgca
      181 ggacggcacc gcgggcgccg tcaacctcgc ccgaccccat gtccgggagc cggtgctcat
      241 catcttcgtg gacaccgtct tcgaggccga cctcaccctc atcaaccgcg ccgacgccga
      301 cgggatcatc tgggccaagg aggtggagga ctaccagcgc ttcggcgtgg tggtgaccga
      361 cgcccagggc tacatgaccc ggatcgtgga gaagccgagc acgcccgtct cgaagctcgc
      421 caacatcggc ctctactaca tccgcgcggt ggacagcctg tggcagggca tcgaccacgt
      481 cctcgccagc cccaagaaca agggcgagtt cttcctcacc gacgcgttcc agtggatgat
      541 tgagcacggc aagcggatcc tcacggccga ggtcgggggc tggtacgact gcggcgcgcc
      601 gggcacgctg ctggagacca acgagaccct gctccggctg ggcgcggcgc ggcgggtgga
      661 cttccccggc gtcaccatcc acgatccggt ctacatcgag gacggcgtca cgatcgagcg
      721 gagcgagatc gggcccaacg tctgcctcga gcggggcacc caagtgagcg gcagcacgct
      781 gcgccacacc atcgtgggcc gcgaatccgt gatcaccggg tccacgctcg acggcgccct
      841 cctcggcaat cacgtgacgg tgcagggcta ccgcggaggt gcgtcactgg gcgatcattc
      901 agagataacg gcgaaaggct gatgcaacct cgggactcct gctcgaggat ccatggcgtc
      961 ggttgacgat ctctgccggt cctatctcga tctgaagtac cacttcgacc ccgccgcggc
     1021 gagctcggcc ggcctggtgt cgcacgacgc gcgcctcggc cggttcgatg ccgagacgac
     1081 gcgtgagcat ctctccgcgc tgcgcgcgct ggccggcgcc gtggaggagc tcgagagcga
     1141 cgatctccag gcggagatcg atcggaccgc gctcctcggc gagcttcgca acaccatcca
     1201 ccggctggag cacgagcggc cgcacgtgcg caacccggcc ttctggctct cgcacgtctt
     1261 tcaggggctc tacgcgatcg tctcgcggcg ggacggtgcc gtggccggcc gcacgccggc
     1321 cgcgctggag cgcctgcggg cggtgccggc cttcctcgac gtcgcccgga acaccctgga
     1381 cgagccgccc tcggtgttcg tggacaccgc gctcggcatg ctcggcggcg gcggcgagct
     1441 ggtggtccag ctcgcggcgg cgctggagcg ggagtcgccc gagctgggcg ccgatctcag
     1501 gagcgcggcc ggggaggcgc tcgagggcct caagcgtttc ggcaccgcgc tccgtgacga
     1561 ggtggagcca gcggccgacc cgcatgcgtt cgcggtaggc gaagagcagt tcagccgccg
     1621 gctgcaccac gagcacgcgc tcagcgccgg ggcgccggag ctctggcgct acgggctcca
     1681 cctgcaggag gaaaccgagg cggcgctggc ggcgctggcg ggcacgatga acggtcggcc
     1741 gtggcgcgac ctggtggagg agctgcgcgg cgacatcccg gagtcggacg ccctgcttcc
     1801 cgtctaccgg gccgagctgg accgggccca cgccttcgtg gaggagcggg agctggtgag
     1861 ccttccgcag gatcccgtgg acgtggtggc gacgcccgga ttcctcgtgg cgctggtccc
     1921 cttcgcggcc tacgagccgc cgcccatctt cctggcggag cagaccggaa ggttctacgt
     1981 cacccagccc gatccttccg ccccggcgga gatccgcgcg cggcagcggc ggggccactg
     2041 cctccacgcg atcccggcga tggtggcgca cgaggcgtat cccggccacc acctccagct
     2101 ggtcacggcc caggggcttc cgtcggaggt gcggcggcac atctggaccc cggtgatggt
     2161 ggagggctgg gcgctctact gcgagcagct catggacgaa tcgggctact acggcgacga
     2221 ccaggcgcgg ctcttccggc tggtgaatct cctgtggcgg gccatccgga tcgtgctcga
     2281 cgtgggcctg cacacccgtg gcatgtcccc cgccgaggcc gtggactaca tggtggagca
     2341 cctgccgatc gagcgtccga gcgcggaggc cgaagtgcgc cgctactgcg cctacccgac
     2401 ctatcagctc tgctacgcgg tcggccggcg cgagctgctc cgtctgcggg acgcgtaccg
     2461 cgagcgggcg ggagcgtcgt tccggcccaa ggcgttccac gacgagctga tgggctacgg
     2521 cgggctgccg gtgacgctgg cgcgctgggg catggagctg ggggaggagt gaagatcacc
     2581 gtcctgacgt acctggacag cgagaacgag aactccaagg agtacgaccc ggtcgtgccc
     2641 caggtcgccc gcgcgctgcg gaagctgggg caccgggtct cggtcctcgg cgtccatggg
     2701 gacgtcaagc ggctgatcgc cgggctctcc cgccgccggc ccgagctggt gttcaatctc
     2761 atggagatgt tcggcgacaa cgtcttcggg gacatcccgg tgaccggcct gctggagctg
     2821 ctcggcctcg attacaccgg cagcgggccg ggcgagctct atctcagcca ggacaagggt
     2881 ctcaccaaga agctgctcgc gttcgaggac atcctctatc cccgcttcgc ggtcttctcc
     2941 cgcgacaccg ccttcgagac cggcggcaat ctccgcatgc cgctcttcgt gaaaccgctc
     3001 cgctccgacg cctcgctcgg catcggcggc aagtcgctgg tgcacgacgc taccgcgctg
     3061 atggagcggg tgagcgcgat ccggaaggag ctcgacgacg ccgcgctggc cgaggagttc
     3121 atcgacggcc gtgagttcta cgtcggcgtg atcgggaact cccagcccaa ggcgctaccg
     3181 ccggtggaga tcgacttcac cggcttcccc gagggggtgc ccaaggtgat ggacagcaag
     3241 gccaagtggg acgagcggag caaggagtac aaggggaccc gctcggtcat ggcccagctg
     3301 cccgacgagc tccgggcccg gctccagaag gtggcggtgg acgcctaccg cgcgctccgg
     3361 gtgcgcgact acggccgggt ggatctccga ctcacggaca ccggtgacat ctacgtgctc
     3421 gaggtcaacg cgagctgcta cctggagaag gccagcgagt tcgccatggc ggcgaacgcg
     3481 gcgggcctgg actatctcag gctgatcgag cggatcgtgg acctggcgat cgcgaggaga
     3541 aagaagaagc ggtgatgtca ccctgagcgc agcgaagggg gccagctacg gcaggtagct
     3601 cccccgctgc acgtggttca tcgccaatcc cgtcaccagc gtcgtcaccg ccacgatcgc
     3661 cgccgcctcc cgggccggca tgtacccctg gcgcagatgc tccgcccgct cggccaggta
     3721 gcggatcagg acccgggtcc gctccggaaa gtgccccgtc caccggaaga cgttcgtcag
     3781 caggtccggc tccagccgcc ggatgaggac ccccgccggc gcgagcggct cgccgggggc
     3841 gccgtgggcg ggacccaggt cctcgaagat cgcgcgaat
//
LOCUS       DASUYN010000442         2643 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1238696, whole genome shotgun sequence.
ACCESSION   DASUYN010000442 DASUYN010000000
VERSION     DASUYN010000442.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2643)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2643)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2643
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1238696"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..829
                     /locus_tag="VF061_08640"
     CDS             <1..829
                     /locus_tag="VF061_08640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669610.1"
                     /translation="YRTPTFSVGGSAYHRSRWTALDVRGTVGWTPVPIFAANVEAVHQ
                     RHYGGRNSDFVALSAGLQPVRGLALTGSARLGNLVSAPAITGDTAQDISDYEAAIGWE
                     RERVGLRLALSRTAAFSPFGYAEFPRIASLGAAPQVEWVTARVRLAPLRWITLESWYS
                     DPRDVIPEGIPPSHSLTAVTLRSKFLRQFPSGIFDLKLRFSVESWGTGVIARDAAGVP
                     IRLGGATFFRSLIQIQLQSFHLYWDRGNLSASELTYVPGFELPAYGTVFGVRWEFLN"
     gene            1039..1902
                     /locus_tag="VF061_08645"
     CDS             1039..1902
                     /locus_tag="VF061_08645"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YicC/YloC family endoribonuclease"
                     /protein_id="HEX6669611.1"
                     /translation="MTGFGAAEGAVAGGWIRLEIRTVNHRHFNLATKLPGELAVLEGE
                     LRERLRREFDRGHIAVSARWTEYPAASSGFSVDLDRARLVAERLRELQSALGLGGEVT
                     LELVARQSDVISSAGSEAAEISWSEVEPIVARAAAECLTMRAREGEALVADLRHRLDL
                     LGASAERVAARAPERLVRERDRLRAAVAQLLDGKPADETRLAQEIAFQADRMDITEEL
                     VRFRAHLGAARDALGGAKPAGKQLGFLAQELGREVNTMGAKANDAEIAHEVLAMKGEL
                     EKFREQLENLE"
     gene            1899..2534
                     /gene="gmk"
                     /locus_tag="VF061_08650"
     CDS             1899..2534
                     /gene="gmk"
                     /locus_tag="VF061_08650"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: protein motif:HMM:NF012832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004385 - guanylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HEX6669612.1"
                     /translation="MKPFLLVLSAPSGGGKSSIARNLLQGRDDLGYSVSATTRPMREG
                     EREGVDYHFLTREEFLRRRAAGEFLESAGYGGHLYGTLRSEIDRIFAAGRHAVLDIEI
                     EGARQIRENFPNSLHLFVLPPSAEVLIGRLRGRNTEPPAVVRERITRAAEELEAVKEY
                     DYAVVNQDLVIAVAQVAAILDAEARRVSRQDDLPHFIARLRRDVIAAVEKI"
BASE COUNT          392 a          893 c          947 g          411 t
ORIGIN      
        1 ctatcgcacg cccaccttct ccgtcggggg atcggcgtac caccgctccc ggtggaccgc
       61 gttggatgtc cgcggcaccg tgggctggac cccggtgccg atcttcgccg cgaacgtcga
      121 ggcggtgcac cagcggcatt acggggggcg caactccgac ttcgtcgccc tgtccgccgg
      181 gctccagccg gtgcgcggcc tcgcgctgac cggctccgct cggctcggca acctggtgtc
      241 ggctccggcg atcaccggcg acacggcgca ggacatctcg gactacgagg ccgccatcgg
      301 ctgggagcgc gagcgggtgg gactgcggct cgccctctcg cgcaccgccg ccttcagccc
      361 gttcggctac gccgagtttc cccggatcgc ctcgctgggc gccgcacccc aggtggagtg
      421 ggtgaccgcc agagtgcggc tcgcgcccct gcgctggatc accctggaga gctggtacag
      481 cgatccgcgg gatgtcattc ctgaggggat cccgccctcc cactcgctga ccgcggtgac
      541 gcttcggtcg aagttcctgc gccagttccc cagcggcatc ttcgacttga agcttcggtt
      601 cagtgtggaa tcgtggggta ccggcgtgat cgcgcgtgat gcggccggcg tgccgatccg
      661 gctgggggga gcgaccttct ttcgcagtct gatccagatc cagctgcaga gcttccacct
      721 gtactgggat cggggcaatc tcagcgcgtc ggagctgacc tacgtacccg gtttcgagct
      781 gccggcgtac ggaacggtgt tcggcgtgcg gtgggagttc ctcaactagt ttctcatagc
      841 tcgctcgtaa cgcgcagttg tgtgggcttt tacagcacaa gcctcatggg gagtggagcg
      901 cagcaggcgg tgccggcatt ggcctccttc gctccactcc gcatcacacc accccagacg
      961 tccgacctac caactctccg cgttcgcggc taaatttccc ggctttcccc ggcctcagga
     1021 ggtcctctgc cgtacagcat gaccggcttc ggcgcggccg aaggcgcggt ggcgggcggc
     1081 tggatccggc tcgagatccg gaccgtcaac catcgccact tcaatctcgc caccaagctg
     1141 ccgggcgagc tggcggtact cgaaggtgaa ctgcgcgagc ggctgcgccg ggagttcgat
     1201 cgcggccaca tcgcggtgtc ggcgcgctgg acggagtatc ccgcggccag cagcggcttc
     1261 tcggtggacc tcgaccgggc ccgcctggtg gccgagcggc tccgggaact gcagtcggcg
     1321 ctggggctcg gaggcgaggt cacgctggag ctggtcgccc ggcaatcgga cgtgatctct
     1381 tcggccggca gcgaggcggc ggagatctcc tggagcgagg tggagccgat cgtcgccagg
     1441 gccgccgccg agtgcctgac gatgcgcgcg cgcgaagggg aagcgctggt ggccgacctc
     1501 cgtcatcggc tcgacctgct gggcgcctcg gcggagcggg tggcggcccg ggcacccgag
     1561 cggctggtgc gggagcgcga ccggctgcgc gcggcggtgg cccagctgct cgacgggaag
     1621 ccggcggacg agacccggct ggcgcaggag atcgcctttc aggcggaccg gatggacatc
     1681 accgaggaac tggtccgatt ccgcgcccac ctgggggccg ctcgcgacgc gctcggcggc
     1741 gccaagccgg cgggcaagca gctcggcttc ctggctcagg agctgggccg ggaagtgaac
     1801 accatgggcg cgaaggcgaa cgacgcggag atcgcccacg aggtcctcgc catgaagggc
     1861 gagctcgaga agttccggga acagctcgag aacctcgagt gaagccgttc ctgctggtgt
     1921 tgtccgcgcc gtcgggcggc gggaagagca gcatcgcgcg caacctcctg cagggccggg
     1981 atgacctggg atactcggtc tcggcgacga cgcggccgat gcgcgagggc gagcgcgagg
     2041 gggtggacta ccacttcctc acccgcgagg agttcctgcg gcggcgggcg gcgggggagt
     2101 ttctcgagtc ggccggttac ggcgggcacc tctacggcac gctgcggagc gagatcgacc
     2161 gcatcttcgc cgccggacgc cacgccgtac tggacatcga gatcgagggc gcgcgccaga
     2221 tccgcgagaa ctttccgaac tccctgcacc tgttcgtcct cccgccgtcg gccgaggtcc
     2281 tgatcggacg gctgcggggc aggaacaccg agccgccggc cgtggtccgc gagcggatca
     2341 cccgcgcggc cgaggagctc gaggcggtca aggagtacga ctacgcggtg gtgaaccagg
     2401 acctggtcat cgccgtggcg caggttgccg ccatcctcga cgccgaggct cggcgggtct
     2461 cgcgccagga cgacctgccg catttcatcg cgcggctcag gcgggatgtc atcgccgccg
     2521 tggagaagat ctagagctgc gatccacgca cttttcatca ccaggcaccc caaggagccg
     2581 gagcacatgc gaatcaccac ccccagcgag gtcgcgaagc aggcggggaa caagtatctg
     2641 ggc
//
LOCUS       DASUYN010000443         4920 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1679242, whole genome shotgun sequence.
ACCESSION   DASUYN010000443 DASUYN010000000
VERSION     DASUYN010000443.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4920)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4920)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4920
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1679242"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..629)
                     /locus_tag="VF061_08655"
     CDS             complement(<1..629)
                     /locus_tag="VF061_08655"
                     /inference="COORDINATES: protein motif:HMM:NF013882.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HEX6669613.1"
                     /translation="MTRETLVLVISLADAAERRAGFAERARHTTVPWKFFDAHRELGG
                     GLTYRPEDAVVAKGRPLMPGELGCYSSHYHAWLALLDSPARQLIVLEDDTIVDWTFLE
                     RLAATDFTGRDVSYLRLFAKRPCAFRLHGEAIEPQRYLVEYAGYAHGTQGYVLTRAGA
                     ERFVRHCRRVRRPVDIELDRAWDHGVPCLAVFPFPLTEISTASTIGSAR"
     gene            complement(626..1858)
                     /locus_tag="VF061_08660"
     CDS             complement(626..1858)
                     /locus_tag="VF061_08660"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HEX6669614.1"
                     /translation="MTAVAAPPRPLRIGLMLRAVDDIDGQGIYIRKLCEALFELDSHN
                     RYVAYYCRPDQLGRYADHANVREVLVPGRRKLVWDQVLIPLAARRDRLDVLFHHKFSI
                     PLLAPCPTVVQQRGTEYWSHPEFYSGWSGRVDRIYSRFMIPLYCRRAVRVLTNSDTLA
                     DELVRFVGVPRGKLRTVYASADESFRPIVNREVLAAVRARYRLPEVPFLLMVVKGHQV
                     MGQASGRALTPRKNVALAIQAYGRMRTRALAAGHMPPPLVILGIGIAERLTPEVIAEH
                     TDPCAIHTSGFVEFEDMPALYSLARALVFPSRYESFGIPIVEAMACGCPVVTANTSAC
                     PEVAGDAAILVDPDDVEGMAAAMFRVSLDDTLADDLRRRGLRRAAGFSWTASARALVA
                     ELETAARLGRRARVPRAA"
     gene            2084..3091
                     /locus_tag="VF061_08665"
     CDS             2084..3091
                     /locus_tag="VF061_08665"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEX6669615.1"
                     /translation="MTLVTGATGFTGGHLVRSLVADGVPVRIIARSEERARQLLPPGV
                     EIVEGDIADPGVIERAMQGVGAVYHLAAVYREAKHRDLRYREVNVDASRLLLEAAART
                     SVRRYVHCSTVGVHGHVASPPADESAAYAPGDVYQATKCEAEQLALSYRDRIPLAVAR
                     PTAIYGPGDTRLLKMFRLIAQQRFPLLGGGENYYHTVHVKDLVRGLRLLGSHSRAVGE
                     VFILGGESYLKLSELAAMIAAAAGVPAPWLRLPVRPFQLVGSLVEKLCVPLGIEPPIH
                     RRRVDFFTKSRAFSIDKARRLLGYRPEVRLADGIRETMDWYVANGYLERKAQLEAAYQ
                     Q"
     gene            3088..3852
                     /locus_tag="VF061_08670"
     CDS             3088..3852
                     /locus_tag="VF061_08670"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX6669616.1"
                     /translation="MTLAATPAREDADVESSSELYARRFAGPVGQWFLQLQADLTLEC
                     LARLPPGAAVLDVGGGHAQLAPPLAEAGYRVTVVGSDASCGRRLAPLTSSGRCRFDVG
                     DLLALPYGDQAFEAVVCYRLLAHSIDWRRLVGELCRVARHRVVVDYPARRSVNIASEG
                     LFRIKNSIERGTTRPFALYGRTEVASAFEAAGFQVTKERPQFFLPMAFYRLAGSAGLA
                     RAAERLARSVGLTGLLGSPVIARADRRVDPGGSRRG"
     gene            3866..>4920
                     /locus_tag="VF061_08675"
     CDS             3866..>4920
                     /locus_tag="VF061_08675"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX6669617.1"
                     /translation="MLAWPGLNARAKNPYTWLLYSHLAELGVRVRDFTPVRALRGGYD
                     ILHVHWPEKALMVSGSPAKVAGAAAGRAVLAAARLHGASVVWTTHNARPHEGWSSRLE
                     RWYWSGVIRNVDAVIHPSAASRAAVEATYPALARLPNAVVRLGHFRGSYPDRLSREEA
                     RESLGIAAGAAVVAFLGLVRPYKNVPHLIATVRALPPERNAVLLVGGEPLTAQLAAEI
                     ERATGRDPRVRLMLRHVPDEDVQRFLRAADLVALPFTDITNSGSALLALSFDRPVLVP
                     RLGAMGELQQLVGADWVRTYDGELTPAILDAALAWAGTRPGDVPDLSPLDWEAIAAET
                     LELYRAVRRESGAVAGGS"
BASE COUNT          707 a         1724 c         1757 g          732 t
ORIGIN      
        1 cacctggccg agccgatggt ggaggcggtg gagatctcgg tgagcggaaa gggaaacacc
       61 gccaggcaag gcaccccgtg atcccaggcg cggtccagct cgatgtccac cggccgccgc
      121 acccggcggc agtggcgcac gaagcgctct gcccccgctc gggtgaggac gtatccctgg
      181 gtgccatggg cgtacccggc gtactcgacc agatagcgct ggggctcgat ggcctcgccg
      241 tgcagcctga aggcgcaggg tcgcttggcg aagagccgga ggtaggagac atcgcggccg
      301 gtgaagtccg tcgccgccag ccgttccaga aaggtccagt ccacgatcgt gtcgtcctcc
      361 agcacgatca actgccgcgc cggggagtcg agcagcgcca gccaggcgtg gtagtgactg
      421 ctgtagcagc ccagctcgcc gggcatgagg ggccggccct tggccacgac cgcgtcttcg
      481 ggacgatagg tgagtccgcc gccgagctcc cggtgggcgt cgaagaactt ccaggggacg
      541 gtggtgtggc gggcgcgctc cgcgaacccg gcccggcgct ccgccgcgtc cgcgaggctg
      601 atcaccagga ccagcgtctc ccgggtcacg ccgcccgcgg tacccgggcc cgccgcccca
      661 gccgggcggc cgtctccagt tccgcgacga gggctcgggc gctcgccgtc caggaaaagc
      721 ccgccgcccg ccgcaggccc cgccggcgca gatcatcggc cagcgtgtcg tccaggctca
      781 cccggaacat cgcggcggcc atcccctcca cgtcgtccgg atccaccagg atcgcggcgt
      841 cgcccgcgac ttcggggcag gccgacgtat tggccgtgac cacggggcag ccgcaggcca
      901 tggcctccac gatcggaatg ccgaagctct cgtaccggga cggaaacacc agcgctcgcg
      961 ccagactgta gagcgccggc atgtcctcga actccacgaa gcccgaagtg tggatcgcgc
     1021 aggggtcggt gtgctcggcg atgacctccg gggtgagtcg ctcggcgatg ccgatgccca
     1081 gaatcaccag cggtggaggc atgtgccccg ccgcgagcgc gcgcgtccgc atgcgaccgt
     1141 aggcctggat ggccagcgcg acgttcttgc gcggggtgag cgcgcggccg gaggcctgac
     1201 ccatgacctg gtggcccttg accaccatca ggaggaaggg gacctcgggc aaccggtagc
     1261 gtgcccggac cgccgccagc acctcccgat tgacgatcgg ccggaagctt tcgtcggccg
     1321 aggcatagac cgtgcgcagc ttgccccgcg ggaccccgac gaagcgcacc agttcgtcgg
     1381 ccagggtgtc ggagttggtg agcacacgca cggcccggcg gcagtagagc gggatcatga
     1441 accggctgta gatccgatcc acccggcccg accagccgct gtagaattcc gggtggctcc
     1501 agtactcggt tccgcgctgc tggaccaccg taggacaggg agccagcagc gggatgctga
     1561 acttgtggtg gaacagcacg tcgagccggt cgcggcgtgc ggccaggggg atgagcacct
     1621 ggtcccacac cagcttgcgg cgtccaggaa ccaggacttc gcgcacgttg gcatggtccg
     1681 cataccggcc cagctggtcg ggccgacagt agtaggcgac gtatcggttg tgcgagtcca
     1741 gctcgaacag ggcctcacac agcttccgaa tgtagatgcc ctggccgtcg atgtcgtcca
     1801 ccgcccggag catcagcccg atgcgcaggg gtcggggcgg cgcggcgacc gcggtcatgg
     1861 caccccccgc tgggcgagtg tgatgcaaga cgttgacacg agtccccttg tctggctact
     1921 gatgagcacg atgttacgca gagcgagtat catccgtgta actacctaac agccggagcc
     1981 gcagcggtgg tgaccggcgt cacaagtggc tgccgccccg ggcgcgatca caaagtaatg
     2041 aggtccgatg attgcacgtc ttgacggagc acccacgcga gagttgacgc tcgtcaccgg
     2101 ggccaccgga ttcacggggg gccatctggt ccgctccctg gtcgcggacg gcgtgccggt
     2161 gcggatcatc gcccgctcag aggagcgggc ccggcaactg ctcccgccgg gggtcgagat
     2221 cgtcgagggc gacatcgccg atcccggggt gatcgagcgg gcgatgcagg gtgtcggcgc
     2281 ggtgtaccac ctggcggcgg tgtaccggga agccaagcat cgggacctcc gctaccggga
     2341 agtcaacgtg gacgcctccc ggttgctgct ggaggcggcc gcccggacct cggtgcgccg
     2401 ctacgtgcac tgcagcaccg tgggcgtgca tggccatgtc gcctcgccgc cggccgacga
     2461 gagcgcggcc tacgctccgg gcgacgtcta ccaggccacc aagtgcgagg ccgagcagct
     2521 ggcactgtcc taccgcgacc ggatcccgct cgcggtggct cggccgaccg ccatctacgg
     2581 gcctggcgac acccgcctgc tgaagatgtt ccggctcatc gcgcaacagc gcttcccgct
     2641 gctcggcggg ggtgaaaact actaccacac ggtgcacgtg aaggacctgg tgcgcgggct
     2701 gcgcctcctc ggtagccatt ccagggcggt gggcgaggtc ttcatcctgg gtggcgagtc
     2761 ctacctgaag ctgtcggagc tcgcggccat gatcgcggcg gcggcgggcg tcccggcccc
     2821 gtggctgcgc cttccggtcc ggcccttcca gctcgtgggg tcgctggtgg agaagctgtg
     2881 cgtgccgctc gggatcgagc cgccgatcca ccgccgccgg gtggacttct tcaccaagag
     2941 ccgagccttc agcatcgaca aggcccgccg cctgctcggc tatcggcccg aggtgaggct
     3001 ggcggacggc atccgggaga cgatggactg gtacgtcgcc aatggctacc tggagcgcaa
     3061 ggcacagctc gaggccgcct accagcaatg accctggccg ccacgccggc gcgggaagac
     3121 gccgacgtcg aatcctcctc ggaactctac gccaggcgct tcgcgggccc cgtcggtcag
     3181 tggtttctcc agctccaggc cgatctcacc ctcgaatgtc tcgcccggct gcctcctggt
     3241 gccgcagtgc tcgacgtggg cggcgggcat gcgcagctcg caccacccct ggcggaggcc
     3301 ggataccggg tcaccgtcgt gggcagcgat gcctcctgcg gccggcgcct cgctcccctg
     3361 acctcgtcgg gccggtgccg cttcgacgtc ggtgatctcc tcgcgctgcc ctacggcgat
     3421 caagccttcg aggcggtggt ctgctatcgc ctgctggccc acagtatcga ctggcggcgg
     3481 ctggtcggag agctctgccg ggtcgcccgg caccgggtgg tggtggatta ccccgcccgg
     3541 cgcagcgtga acatcgcttc cgaaggcctc ttccggatca agaactcgat cgagcggggc
     3601 acgacccggc ccttcgccct gtacgggcgg accgaggtgg cgagcgcttt cgaggcggcg
     3661 gggttccagg tgacgaagga gcgcccccag ttcttccttc ccatggcatt ctaccggctg
     3721 gcgggctcgg caggactggc gcgtgcggcg gagcgcctcg cccgttcggt gggactcacc
     3781 ggcctgctcg gctccccggt gatcgcccgg gccgatcgcc gcgtggaccc cggtggctcc
     3841 cgtcggggat agcgtcccgc tgggggtgtt ggcctggccg ggcctgaacg cccgggcgaa
     3901 gaacccctac acctggctgc tctactccca tctcgccgag ctcggcgtcc gggtgcgcga
     3961 cttcaccccc gttcgcgcgc tccgcggcgg ctacgacatc ctccacgtcc actggcccga
     4021 gaaggcgctg atggtgtccg gatcgcccgc gaaggtggcc ggcgccgccg ccggccgcgc
     4081 ggtcctcgcg gccgctcggc tgcacggcgc gagcgtcgtc tggaccaccc acaacgcgcg
     4141 gccgcacgag ggctggagct cccggctgga gcgctggtac tggtcggggg tgatccggaa
     4201 cgtggatgcg gtgatccatc ccagcgccgc gagccgggcc gcggtggagg cgacctatcc
     4261 ggcgctggcc cgccttccca acgcggtggt gcgcctgggc cacttccgcg gcagctatcc
     4321 cgaccggctc tcccgggagg aggcccgcga gtccttgggg atcgctgctg gcgcagcggt
     4381 cgtcgccttc ctgggtctgg tgcggcccta caagaacgtg ccccacctga tcgccaccgt
     4441 gcgggctctt ccgccggagc ggaacgccgt gctcctggtg ggtggggagc cgctcaccgc
     4501 acagctcgcg gcggagatcg agcgcgcgac gggccgcgat ccgcgggtgc ggctcatgct
     4561 gcgccacgtg ccggacgagg acgtgcagcg cttcctccgg gcagccgatc tggtggcgct
     4621 tccgttcacc gacatcacca actcgggcag cgcgctgctc gcgctctcgt tcgatcgccc
     4681 cgtactggtg ccgcggctgg gcgccatggg agagctccag cagctggtgg gcgcggactg
     4741 ggtccgcacc tacgacggcg agctcacgcc cgcgatcctc gacgcggcac tcgcgtgggc
     4801 cgggacacgt cccggcgacg tgccggacct gtcgccgctc gactgggagg cgatcgccgc
     4861 cgagacgctg gagctctacc gagcggtgag gcgggaaagc ggagcggtgg cgggtggatc
//
LOCUS       DASUYN010000444         4032 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_357750, whole genome shotgun sequence.
ACCESSION   DASUYN010000444 DASUYN010000000
VERSION     DASUYN010000444.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4032)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4032)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4032
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_357750"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..396)
                     /locus_tag="VF061_08680"
     CDS             complement(<1..396)
                     /locus_tag="VF061_08680"
                     /inference="COORDINATES: protein motif:HMM:NF012579.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEX6669618.1"
                     /translation="MRLRDFFSPGGISFDLQATDKNAALSAMVHLLGMDARASDTLHR
                     VLQRRESLGSTGFGRGIAIPHCRSLVASRLRLAYGQCRKGVEFQAVDGRPVHHLFLIV
                     APPLEISNQYLPVLGRIAQLAKEPDIPERL"
     gene            complement(466..1743)
                     /locus_tag="VF061_08685"
     CDS             complement(466..1743)
                     /locus_tag="VF061_08685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669619.1"
                     /translation="MTLRRIVLGTAFVAGPLSAQTDPVVESRVHYQAAARAYEARDLP
                     TFLEHARKAQELRPAHGGVTLALASALALNGDTAGAFRALSHFAALGYSTDLEADSDF
                     ESLRASGSYPDLARRLERNREPVVVSRPAFELPDSALLTEGIAYDDRERVFYVGSVRQ
                     GKILRVTPGGEAADFARIEEGRWAPLGLQVDPRRRVLWVAAAALPQSVGHLPADSGRS
                     AILRYDLRTGRLTGRHLTGTGQPNVIGDLVITRGGDVYATDSRAPVIFRVRAGGDSLE
                     PFITSPLLLSAQGLALTPDERTLYVADYARGILRVDLRRRVVSQVEAAEDVLALGIDG
                     LYLHGGGLIGIQNGVTPHRVVRLKLAPEGSRVLRAEVLERAHPMYAEPTLGVLVGSAL
                     FYVANSQWERFGSDGTVAHPDSLRRPVVLRLPL"
     gene            1870..2853
                     /gene="dusB"
                     /locus_tag="VF061_08690"
     CDS             1870..2853
                     /gene="dusB"
                     /locus_tag="VF061_08690"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HEX6669620.1"
                     /translation="MQLPFPSEHGFPLVLAPMAGVSEAPYRQVCRRMGADVVLSEFLS
                     SEAIRRRIRTTLEGAEFEEVERPIGIQIYGADPGAMAEAARLITEHYRPEFIDINFGC
                     PVKKVVQRNGGSGCLRDLDLVQRIIRAVIGATHLAVTAKTRSGWNDEQRDPVGIALRM
                     QDAGIRAFTLHARSRTQMFSGRADWDEIARVVEALDIPVFGNGDINAATDIVRMRDHT
                     GCAGVMIGRGAFGNPWLFRDGQALLAGRPQPPAPGARERFELALDHARLALRLQGDSR
                     KTVIEFRKHLGWYTKGLHGATDLRQRLFQIESVAEAEAIFLEYLDPVAHVA"
     gene            2850..3605
                     /gene="larB"
                     /locus_tag="VF061_08695"
     CDS             2850..3605
                     /gene="larB"
                     /locus_tag="VF061_08695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018281842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nickel pincer cofactor biosynthesis protein
                     LarB"
                     /protein_id="HEX6669621.1"
                     /translation="MNAQQLGTILAEVAAGRLAPDAALDRLRRLPFEDLAFARIDHHR
                     ALRQGQPEVVFCEGKTPDQVVAICERLAVMGGRFLGTRCGEAHAEAVRRAFPRAVWSP
                     VARTVHLLPEDALEAPPDAGTILVVSAGTSDLPVAEEAAVVAEVFGHRVERLADVGVA
                     GIHRLFASSDRLQQADVIIVVAGMEGALPSVVGGLVAVPVIAVPTSVGYGASFGGLAA
                     LLGMLNSCAAGVTVVNIDNGFGAAAAASRICRR"
     gene            3602..>4032
                     /locus_tag="VF061_08700"
     CDS             3602..>4032
                     /locus_tag="VF061_08700"
                     /inference="COORDINATES: protein motif:HMM:NF013694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CorA family divalent cation transporter"
                     /protein_id="HEX6669622.1"
                     /translation="MTIRTVVEKSEPRFIWLDVVDPTREELSELVADYGLHTLSVNDC
                     LDPEHLPKYEVFESHSFVILRAADADAPPTADTVQALTRKIAVFAGPAFLITIHRKDQ
                     PWLTALQERSLGGVPLKHATRSEGIQVHLLTQLFNAALDTY"
BASE COUNT          590 a         1403 c         1448 g          591 t
ORIGIN      
        1 gagccgctcg gggatgtccg gctccttggc gagctgggcg atccggccga ggaccgggag
       61 atactggttg gagatctcca ggggcggcgc gacgatgagg aagaggtggt ggaccggtct
      121 cccatcgact gcctggaact ccacgccctt tcggcactgg ccatacgcca gtcggagacg
      181 gctggcgacc agcgagcggc agtgggggat cgcgatgccg cggccgaagc cggtggaacc
      241 gaggctctcc cgtcgctgga ggacgcggtg gagcgtgtcc gaggcgcgcg cgtccatccc
      301 gagcagatgg accatggccg agagggccgc atttttgtcc gttgcctgga ggtcgaagct
      361 gattccaccg ggactgaaga aatccctgag acgcatgggg cgtggggcgg agggtcgtcg
      421 cgcgccggga aagctgcggc aacctaactc cgcccccgaa gggtgtcaaa gcggcaggcg
      481 cagcaccacc ggacggcgga gcgagtcggg atgcgcgacg gtgccgtcgc tgccgaagcg
      541 ctcccactgg ctgttcgcga cgtagaagag cgcgctcccg accagtacgc cgagtgtcgg
      601 ctcggcgtac atcggatgcg cgcgctccag cacttcggcc cggaggacgc ggctcccctc
      661 gggcgcgagc ttgaggcgca cgacccggtg cggcgtcacg ccgttctgaa tgccgatgag
      721 gccgccgccg tgcaggtaca gcccgtcgat tcccagggcc agcacatctt ccgccgcctc
      781 gacctgggag acgacccggc gtcggaggtc cacccggagg atgccgcgcg cgtagtcggc
      841 gacatagagg gtgcgctcgt cgggtgtgag cgccaggccc tgggccgaga gcaggagcgg
      901 ggacgtgatg aagggctcga ggctgtcgcc tcccgctcgg acccggaaga tcacgggggc
      961 tcggctgtcg gtggcgtaca cgtcgccgcc acgggtgatc acgaggtcgc cgatgacgtt
     1021 gggttgcccg gtcccggtga ggtggcggcc ggtgagtcgt ccggtccgga gatcgtagcg
     1081 gaggatggcg ctgcggccgc tgtccgccgg caggtgcccg acggattgcg gcaacgcggc
     1141 cgcggctacc cagaggacgc gccgccgggg gtccacctgc agcccgagcg gcgcccacct
     1201 gccctcctcg atccgggcga agtcggccgc ctcgcccccg ggcgtcaccc tgaggatctt
     1261 cccctggcgg acgctcccca cgtaaaacac acgctctcga tcgtcgtacg cgatcccctc
     1321 ggtcagtaac gccgagtccg ggagctcgaa cgccggccgg ctcaccacca ccggctcgcg
     1381 gttgcgctcc agccggcggg ccaggtccgg atagcttccg ctggcccgca ggctctcgaa
     1441 gtcggagtcc gcctccagat cggtggagta gccgagcgcg gcaaagtggc tcagcgcgcg
     1501 gaaggcgcct gcggtgtccc cgttcagggc cagggccgag gccagcgcca gggtcacccc
     1561 gccgtgcgcc ggacgaagct cctgcgcctt gcgggcgtgc tcgagaaagg tgggcaggtc
     1621 gcgggcctcg taggcgcggg cggccgcctg gtaatgcacc cgggactcga ccacgggatc
     1681 ggtctgggcg ctgagaggcc cggcaacgaa ggcggtgccc agcacgatgc gcctgagggt
     1741 cactggatct ccgactggca gtggggagtg ggtactctgg taccggtacg gacccacact
     1801 ccaccaggtt ccagggtcgt ccgcggcgcc gtcattgccc ggactctagg cgccaagtat
     1861 tttccggcca tgcagttgcc cttcccgagc gagcacggat ttcccctggt cctggcaccc
     1921 atggcgggcg tttccgaggc gccctaccgg caggtgtgcc gccggatggg ggcggacgtc
     1981 gtgctgtccg agttcctctc ctccgaggcc atccgccggc ggattcgcac cacgctggaa
     2041 ggcgccgagt tcgaagaggt cgagcggccg atcggcatcc agatctacgg ggcggacccg
     2101 ggggccatgg ccgaggccgc ccggctcatc accgagcact atcggccgga gttcatcgac
     2161 atcaacttcg gctgccccgt gaagaaggtg gtgcagcgga acggggggag cggctgcctt
     2221 cgcgacctcg atctggtcca gcggatcatc cgcgccgtca tcggcgcgac gcatctggcg
     2281 gtcaccgcca agacgcggag cggctggaac gacgagcagc gcgacccggt gggcatcgcg
     2341 ctccggatgc aggacgcggg gatcagggcg ttcaccctgc acgcgcgctc ccgtacccag
     2401 atgttctcgg ggcgcgccga ctgggatgag atcgcccggg tggtggaagc gctcgacatc
     2461 cccgtgttcg gcaacggcga catcaacgcg gccacggaca tcgtacggat gcgcgaccac
     2521 accggctgtg cgggggtcat gatcggacgc ggcgcgttcg gcaacccgtg gctcttccgc
     2581 gacgggcagg ccctgctggc cggccggccg cagccgccgg cgccgggtgc gcgggagcgg
     2641 ttcgagctgg cactcgacca cgcgcgtctc gccctgaggc tccagggcga cagccgcaag
     2701 accgtgatcg agttccgcaa gcacctcggc tggtacacca aggggctgca cggggccacc
     2761 gacctgcgcc agcgcctctt ccagatcgaa tccgtggccg aggcggaggc gatcttcctc
     2821 gaatacctcg acccggtcgc ccacgtggcg tgaacgccca gcagctcggc accatcctcg
     2881 ccgaagtcgc cgccggacgc ctggctcctg acgcggcgct cgaccggttg cgtcggctac
     2941 ccttcgaaga cctcgcgttc gcccgcatcg accatcaccg cgccctgcgc caggggcagc
     3001 ccgaagtggt gttctgcgag ggcaagaccc cggaccaggt cgtcgccatc tgcgagcgac
     3061 tcgcggtcat ggggggtcgc ttcctcggca cccgctgcgg cgaggcccat gcggaggcgg
     3121 tccgccgggc gttcccccgg gccgtctggt ccccggtggc gcgcacggtt cacctcctgc
     3181 cggaggacgc tctcgaggcg ccgcccgacg ccgggaccat cctcgtggtg tccgccggca
     3241 ccagcgacct gccggtggcc gaagaggccg ccgtcgtggc ggaggtgttc ggacatcggg
     3301 tggagcgtct ggcggatgtc ggcgtcgccg ggatccaccg gctcttcgcc tccagtgacc
     3361 gcctgcagca ggcggacgtc atcatcgtgg tcgccggaat ggagggcgcg ctgccgagcg
     3421 tggtcggggg cctggtggcg gtgccggtca tcgcggtgcc caccagtgtg gggtacgggg
     3481 cctccttcgg cgggctggcg gcgctgctcg gaatgctcaa ctcctgcgcc gcgggcgtca
     3541 cggtggtcaa catcgacaac ggcttcgggg ccgccgcggc cgccagccgc atctgccgcc
     3601 ggtgaccatc cgcaccgtgg tcgagaagtc cgagccgcgc ttcatctggc tcgacgtggt
     3661 ggatcccacc cgcgaggagc tctccgagct ggtggccgat tacggcctgc ataccctctc
     3721 ggtgaacgac tgcctcgacc cggagcacct gcccaagtac gaggtcttcg agagtcacag
     3781 cttcgtgatt ctccgggcgg cggacgccga cgcgccgccc accgcggaca ccgtgcaggc
     3841 gctgacccgg aagatcgccg tcttcgcggg tcccgcgttc ctcatcacga tccatcgcaa
     3901 ggaccagccc tggctcacgg cactccagga gcgcagcctc ggcggcgtgc ccctcaagca
     3961 cgccacccgg agcgagggta ttcaggttca cctgctgacc cagctcttca acgccgcgct
     4021 cgacacctac ca
//
LOCUS       DASUYN010000445         2443 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1459832, whole genome shotgun sequence.
ACCESSION   DASUYN010000445 DASUYN010000000
VERSION     DASUYN010000445.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2443)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2443)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2443
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1459832"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..413)
                     /locus_tag="VF061_08705"
     CDS             complement(<1..413)
                     /locus_tag="VF061_08705"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: protein motif:HMM:NF015048.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEX6669623.1"
                     /translation="MPTSPPRGITLRFLAEPTDVNFGGKVHGGAVMKWIDQAGYTCAA
                     GWTGTYCVTVYLGGLHFLGPIHVGELVELRALVIRTGRTSLDVAVDVYAGDPKRAERR
                     RTGHCVMVFVALGMDGRPAPVPPWQPESELDRALEG"
     gene            complement(413..739)
                     /locus_tag="VF061_08710"
     CDS             complement(413..739)
                     /locus_tag="VF061_08710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003359266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal-binding domain-containing protein"
                     /protein_id="HEX6669624.1"
                     /translation="MLSVTTPAIEGRRVSRYLGIVSGEAILGANIFRDFFAGIRDIVG
                     GRSAAYEEELRKAKAIAMEEMERQAEDLGANAVLAVDLDYETIQVGSGGGMLMVSASG
                     TAVVLG"
     gene            complement(797..1090)
                     /locus_tag="VF061_08715"
     CDS             complement(797..1090)
                     /locus_tag="VF061_08715"
                     /inference="COORDINATES: protein motif:HMM:NF018717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1330 domain-containing protein"
                     /protein_id="HEX6669625.1"
                     /translation="MPAYVVVNITVRDPVRYEDYKRLAAPTVSAYSGRYVARGGPVDV
                     REGTWSPARLVILEFPTVERARAWWESPEYAPAKALRQSCADAQLVITEGLPA"
     gene            complement(1120..1608)
                     /locus_tag="VF061_08720"
     CDS             complement(1120..1608)
                     /locus_tag="VF061_08720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669626.1"
                     /translation="MGVPRRLSLAVTAGLHRILAALAGVALAGLPRVGNLPVLRGGGT
                     APDARARLDAALTLLAQLSPGLRERLQHHVTGLFLMRRPPVHGYYSRITGTCTLDVEA
                     LQRESPVEIAAAMVRCATEGWLWRSGRGRSRADEARILEVSELARLHFLQRAVQRMGA
                     SL"
     gene            complement(1740..2252)
                     /locus_tag="VF061_08725"
     CDS             complement(1740..2252)
                     /locus_tag="VF061_08725"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX6669627.1"
                     /translation="MTRIRPALPSDAATLAGFAARTFRETFEADNTPEDMALYLDASY
                     GPERQQAELRDAAIVTLLAEDDGRLTGYCQLREGMAPDCVPGAVPIEIWRFYVDRAWQ
                     GRGVAQALMMASLEAAVERGARTVWLSVWERNARAQAFYRKCGFEDCGAREFVLGRDR
                     QTDRVMTRPL"
     gene            complement(2249..>2443)
                     /locus_tag="VF061_08730"
     CDS             complement(2249..>2443)
                     /locus_tag="VF061_08730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669628.1"
                     /translation="LLTFGGVMRLDRRFSVRLDAQQYLFSSAFDDPYTPHLGTAPTPA
                     HPSRLRHDFVMLAGFSWRSD"
BASE COUNT          377 a          873 c          864 g          329 t
ORIGIN      
        1 ccttccagcg cccggtcgag ctcggactcc ggctgccagg gaggcacggg ggcgggccgg
       61 ccgtccatgc cgagcgcgac gaacaccatc acgcaatgtc ccgtccgccg ccgctcggcc
      121 cgcttgggat cgccggcgta gacgtctacc gcgacatcga gactggtacg gccggtccgg
      181 atgaccagcg cccggagctc gaccagctcg ccgacgtgga tcggccccag aaaatgaagc
      241 ccgccgagat acaccgtcac gcagtaggtg ccggtccagc cggccgcgca ggtgtagccc
      301 gcctggtcga tccacttcat caccgcgccg ccgtgcacct tgcccccgaa gttgacgtcc
      361 gtgggctcgg ccaggaagcg gagcgtgatg ccccgcggcg gagacgtcgg catcagccca
      421 ggacgacggc cgtgccgctc gcgctgacca tgagcatccc gccgccgctc ccgacctgga
      481 tggtctcgta gtccaggtcc accgccagga cggcgttggc tccgaggtcc tcggcctggc
      541 gctccatctc ctccatcgcg atcgccttgg ccttgcggag ctcttcctca taggcggcgg
      601 agcgcccccc cacgatgtcc cggatgcccg cgaagaagtc gcggaagatg ttggcgccga
      661 ggatggcctc gccgctcacg atgccgagat agcggctgac tcgccggccc tcgatggcgg
      721 gggtggtgac cgaaagcatg gggttctccg tcgcgggaag atcaatcggt aaggtaggac
      781 ggccgggtgc tcctgcctag gcgggcaggc cttccgtgat caccagctgg gcgtcggcgc
      841 aggactgccg gagggctttg gcgggcgcat actcggggga ctcccaccac gcgcgggccc
      901 gctcgaccgt gggaaactcc aggatgacca gccgtgcggg tgaccaggtg ccctcacgca
      961 catccaccgg gccgccccgg gcgacgtagc gaccgctgta ggcggagacc gtcggtgccg
     1021 cgagccgctt gtagtcctcg taccggaccg gatcgcgaac ggtgatgttg acgacgacgt
     1081 aggcgggcat tgggtctcca tcttccgagc caggcgtgat cagagcgagg cgcccatgcg
     1141 ctgcacggcg cgctggagga aatgcagccg ggcgagctcg ctcacctcca ggatccgcgc
     1201 ttcgtcggcc cgggagcggc cccgccccga tcgccagagc cagccctcgg tcgcgcagcg
     1261 caccatcgcc gccgcgatct ccacgggaga ctcccgctgg agggcctcga cgtcgagtgt
     1321 gcaggtgccg gtgatgcgcg agtagtaccc gtgcaccggc gggcggcgca tgagaaagag
     1381 gccggtgacg tggtgctgca ggcgctcgcg aagaccgggc gagagctggg cgagcagggt
     1441 gagcgcggcg tcgaggcggg cgcgcgcatc cggagcggtg ccgcccccac gcaggaccgg
     1501 gaggttcccg acccgcggca gaccggcgag cgcgaccccg gccagtgccg ccaggatgcg
     1561 gtgcaggccc gcggtcaccg ccagcgagag ccggcggggc acgcccaagc cggctcgctc
     1621 cctctgttgc cccccgcctt gatcgcccgg catcgaagct ccgtgtgcgg cgcccggaaa
     1681 caagctagtc cgcgaaacgg tccgcaccag accatgccgc gggtccactc tggcggacct
     1741 tacagcggac gcgtcatcac gcgatcggtc tgccgatcgc gccccagcac gaactccctg
     1801 gctccgcagt cttcgaagcc gcacttccga tagaacgcct gcgcgcgcgc gttccgctcc
     1861 cacacactga gccagaccgt gcgcgcgccc cgctcgaccg ccgcctccag actcgccatc
     1921 atgagcgcct gggccacccc acgtccctgc caggcgcggt ccacgtagaa ccgccagatc
     1981 tcgatcggga cggcacccgg cacacaatcg ggggccatcc cctcccggag ctggcagtag
     2041 cccgtcagcc gcccgtcgtc ctcggcgagg agggtgacga tggcggcatc gcggagctcc
     2101 gcctgctggc gctcggggcc atagctcgcg tccaggtaga gcgccatgtc ctcgggagtg
     2161 ttgtccgcct cgaacgtctc gcggaaggtt cgggcggcga agccggccag ggtggctgca
     2221 tcggacggga gggcgggtcg gatgcgggtc aatcgctgcg ccaggagaag ccggccagca
     2281 tcacgaagtc gtgccgcagc cgcgaggggt gcgcgggcgt gggagccgtc cccaggtgcg
     2341 gggtataggg gtcgtcgaac gcgctgctga agaggtactg ctgggcatcc agccgcaccg
     2401 agaaccggcg gtcgagccgc atcacgccgc cgaaggtgag cag
//
LOCUS       DASUYN010000446         2367 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1900850, whole genome shotgun sequence.
ACCESSION   DASUYN010000446 DASUYN010000000
VERSION     DASUYN010000446.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2367)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2367)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2367
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1900850"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..805
                     /locus_tag="VF061_08735"
     CDS             <1..805
                     /locus_tag="VF061_08735"
                     /inference="COORDINATES: protein motif:HMM:NF019121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669629.1"
                     /translation="NRESHVPAICEFLGVPCHASDPLTLSLALHKARGKEILAHRGVP
                     TAPFVLARSADDARHVALPFPLFVKPAFEGSGKGVTVKSVCRNRSQLVRQVSHLLATY
                     SEPVLIETYLPGQEFTVAVLGNGSEARCLPIIGMRFDMLPRGAPPIYGYEAKWIWDTP
                     SKPLEIYDCPANIPESLAEEVRAAALAAYHALECRDWCRVDIRCDAAGRPLVVELNPL
                     PGVLPDPRDHSCFPKAAAAAGMSYDDLIRTVADIAWRRISGRSLLAEVA"
     gene            805..1815
                     /locus_tag="VF061_08740"
     CDS             805..1815
                     /locus_tag="VF061_08740"
                     /inference="COORDINATES: protein motif:HMM:NF019121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HEX6669630.1"
                     /translation="MKVAILFDAGSDEWSPQDVAAVVANVHEVRDALRRRGNEVELLP
                     VRFGDFRWLSRARRADLVFNLCEGINGHARFEDFVVGTLELTGVPFTGCRTWPTSVCH
                     RKHVANTLLSSAGLPVPAYMLAQANKTPSDFPLPAIVKPAAEDASVGIDNGAVCTSKR
                     ALKRRVAQMLEQFEEVLVQEYVAGREFNVGFIGKRMLPIAEIRFDTLPDGTWPIVSYA
                     AKWIPGSPEDEGTVPVCPAEVEPELAGRLGKVARSAWEHLAEGEGYGRVDLRLSQDGQ
                     PYVLEVNPSPDLSSNAGLARMGRAFGWSYDDLVMQIVDEALTRSQSHRAAAALVSGVS
                     AA"
     gene            1812..2315
                     /locus_tag="VF061_08745"
     CDS             1812..2315
                     /locus_tag="VF061_08745"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX6669631.1"
                     /translation="MSGTLVTPHLRNLSAADRGRIEEITRAVGLFRQEEIPVALEVFD
                     AAVSSAAGVPDYVALGAEYDGTLAGWICWGPTPCTLGTFDLYWMAVDPAVQGTGIGTA
                     LIVEMERRLSGVARLIVVETAGRPDYGPTRRFYEARGYRAVATIPDFYAPGDDQVVYV
                     KEVRGKK"
BASE COUNT          380 a          806 c          794 g          387 t
ORIGIN      
        1 gaatcgcgag tcgcatgttc cggcaatctg cgagttcctc ggcgtgcctt gccatgcctc
       61 cgatcctctc acgctgagcc ttgctctcca caaggcgagg ggcaaggaga tcctggctca
      121 tcgcggagtg cccaccgcgc cgttcgtgct ggcccggtcg gccgatgacg cccggcatgt
      181 agcgctcccg ttccctctct tcgtgaagcc ggccttcgag gggtcgggca agggcgtcac
      241 cgtcaagagt gtctgccgca accggtcgca gctcgtgcgc caggtctctc acctgctcgc
      301 cacttactcg gagccggtgc tgatcgagac ctatctgccg ggccaggagt tcacggtggc
      361 cgtcctcggc aacggcagcg aggctcgctg cctgccgatt atcggcatgc gatttgatat
      421 gctgccgcgc ggtgccccgc ccatctacgg ctacgaagcc aagtggatct gggacacccc
      481 gagcaaaccg ctcgagatct acgattgtcc ggcgaacatc ccggagtccc tcgccgagga
      541 agttcgcgcc gccgcgctgg cggcctacca cgccttggaa tgccgcgact ggtgccgcgt
      601 cgatattcgc tgtgacgccg ctggccgccc gctggtcgtc gagctcaacc cgctgccggg
      661 cgttttgccc gacccgcggg accactcgtg ctttcccaag gccgccgcgg cggccggcat
      721 gagctacgac gatctcatcc gcaccgtcgc cgacatcgca tggcggcgaa tcagcggccg
      781 ttcactcctg gcggaggttg cctgatgaaa gttgcgattc tcttcgacgc gggcagcgat
      841 gagtggagcc cccaggacgt ggcggccgtg gtggccaacg tccacgaggt gcgcgacgcc
      901 ctccggcgcc ggggcaacga ggtcgagctg ctgccggtcc gcttcggaga tttccggtgg
      961 ctctcccggg cccgccgcgc cgacctggtc ttcaatctct gcgaggggat caacggccac
     1021 gcccgcttcg aagacttcgt cgtcggcact ctcgagctga ccggcgtccc cttcaccggc
     1081 tgccggacct ggcccaccag cgtctgccac cggaaacacg tggccaacac cctgctctcc
     1141 tctgccgggc tgccggtgcc ggcatacatg ctcgcccagg ccaacaagac cccatcggac
     1201 ttccccctgc cggccatcgt gaaaccagcc gccgaagacg ccagtgtcgg catcgacaac
     1261 ggcgcggtct gcaccagcaa gcgagccctc aagaggcggg tggcccagat gctggagcag
     1321 ttcgaggaag tgctggtcca ggagtacgtg gccggccggg agttcaacgt gggcttcatc
     1381 ggcaagcgga tgcttcccat cgccgagatc cggttcgaca cccttcccga cggcacgtgg
     1441 ccgatcgtga gctacgccgc caaatggatc ccggggagtc cggaggacga gggcaccgtc
     1501 ccggtctgcc cggcggaggt cgagcccgag ctggccggcc gactcggcaa ggtggcgcgc
     1561 tcggcatggg agcacctggc cgagggcgaa ggctacggcc gggttgacct gcggttgagc
     1621 caggacggcc aaccctacgt gctggaggtc aacccgtcgc ccgacctctc gagcaacgcg
     1681 gggctggcgc gcatgggccg ggccttcggc tggagctacg acgatctcgt catgcagatc
     1741 gtggacgagg ctctcacccg gtcgcagagc catcgcgccg ccgccgcact cgtcagcggg
     1801 gtgtccgccg cgtgagcggc accctcgtca caccgcatct tcgcaacctc agcgcagccg
     1861 accgcggccg catcgaggag atcacccgtg ccgtcgggct cttccgccag gaggagatcc
     1921 cggttgcgct ggaggtcttc gatgcggcgg tgagcagcgc cgccggcgtt cccgactacg
     1981 tggcgctggg agcggaatac gacgggaccc tggccggatg gatctgctgg ggaccgacgc
     2041 cctgcaccct cggcaccttc gacctctact ggatggcggt ggaccccgcg gtccagggca
     2101 ccggcatcgg taccgcgctc atcgtcgaga tggagcgccg cctgtccgga gtcgcgcggc
     2161 tcatcgtggt cgaaacggcg ggccgtcccg attacggacc gacccgccgg ttttatgagg
     2221 ccagaggata ccgggccgtc gctacgatcc ccgacttcta cgccccgggc gatgatcagg
     2281 tggtgtacgt gaaggaagtg agaggtaaga agtgagaggt gagaggtaag aagtgagagg
     2341 taagaggtga gaggtaagaa gtgagaa
//
LOCUS       DASUYN010000447         4570 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_358412, whole genome shotgun sequence.
ACCESSION   DASUYN010000447 DASUYN010000000
VERSION     DASUYN010000447.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4570)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4570
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_358412"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..449
                     /locus_tag="VF061_08750"
     CDS             <1..449
                     /locus_tag="VF061_08750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669632.1"
                     /translation="RGRLPRLGRLAVALSLLLIASAGCGESGATGPQRPGENTGTNDS
                     VTPADRLAGTWRATVLIEVPGDVQAWITTWEFDSDGTCLQIAEVRSVVESTPRVTERP
                     CTFTADGFEIAITYTGGSTLTFNYAFPLFSSDRLILDGLEYERVVP"
     gene            418..1659
                     /locus_tag="VF061_08755"
     CDS             418..1659
                     /locus_tag="VF061_08755"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX6669633.1"
                     /translation="MASSTSASSPELARADVLVVGGGPAGSATAHLLALAGRSVLLVD
                     RAAFPREKACSEYMGPEAVRILDRLSVIGGLEAGGAVPLSGTAVTAAHGARLHGRFAL
                     AGHRPFRPTGLSVSRRILDLRLLEAARAAGVTVLERTAVESLVYDAGGVAGAVARTAD
                     GRRGTITARLTVGADGLRSVVGRRLGGRHRGGLQRVAFVGHVEGVEGMGDSAEMFVGR
                     RGYVGLNPIGGGLTNVALVVPLSRAGAARGRTEEFFCEALADFPGPSRRVTRGRLVRR
                     VLATGPFATWSARVTVEGAALVGDAADFFDPFTGEGIYSALHGAELLATAADAALEQP
                     GRVTASALAPYRHARRRAFGGKWAVERLIGYGMHFPTLFDRAVGRLARRGLAHTLVGV
                     TADFVPPSAVLNPVFLARMLL"
     gene            1671..2138
                     /locus_tag="VF061_08760"
     CDS             1671..2138
                     /locus_tag="VF061_08760"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013756.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HEX6669634.1"
                     /translation="MNPAQFRELMGRFATGVTVLTVSGPGGRPLGMTASSLASVSLVP
                     PLVSVCIDHEAELHDSILAASVFVVNVLESRQETLSRRFADRHEDRFEGVGYHRSPDG
                     LVLLDGALAHIECDRFASYPAGDHTIIIGRVIGGSTGEGRPLLYYRGGYGGLG"
     gene            2135..2860
                     /locus_tag="VF061_08765"
     CDS             2135..2860
                     /locus_tag="VF061_08765"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX6669635.1"
                     /translation="MTAGDLGISSLGTELLDDPGADPAAVTLSLRNVARANRWFGGAA
                     AVRHGLGRVLRGATPGRPLTLLDLGTGAGDLPRRAVAWARRRGYVLHPFGLELSRPAA
                     ALAATAGVPCAVGSAGSPPLRDKSVDIVLLSQVAHHFTPDSAVRLFRTCDGLARVGVV
                     VADLRRAPLAALAFRVGATALRFDPITIADGITSIRRGYTAGELRALLAAAGVRARVS
                     RRPGYRLVATWIPGVVGQRSDRP"
     gene            2886..3350
                     /locus_tag="VF061_08770"
     CDS             2886..3350
                     /locus_tag="VF061_08770"
                     /inference="COORDINATES: protein motif:HMM:NF015331.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEX6669636.1"
                     /translation="MRTVDHTHMGAPVERVFEAAADVERWPELLPHYRWVRILDRRAE
                     VAVVEMAAWRPFGPVGYPTWWVSEMRLDHAAPAVHYRHVRGITRGMDVAWRFVSAGGG
                     TDVSIVHDWAGPAWPLISRPAAELVIGPVFIHGIASRTLAGIRRHVEAAGRP"
     gene            3347..>4570
                     /gene="fabF"
                     /locus_tag="VF061_08775"
     CDS             3347..>4570
                     /gene="fabF"
                     /locus_tag="VF061_08775"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HEX6669637.1"
                     /translation="MSAGPPRRRVVVTGIGAVTPIGLGVEGLWGGLRDRRSAIRAISR
                     FDPSAFKSRIAGEVDGFHPTDHIEERRARRLDRYSQFTIASTRMALADAHLDLRREDC
                     DRVGAMMGTALGGVAYGEAQYHAFLTQGPRAVDPALALTVFAGAASCNIAIEFGCTGP
                     NATNGMSCASGAIAIGEGFRAIARGEADVMIAGGAEAPLAPLCFGAFSIIRAMSTRND
                     EPARASRPFDADRDGFVMAEGAAVLVLEERERALARGAPVYIELCGYGLTNDAYHMTA
                     PRPDGSQAARCMRNALAEAGVSAGEVGYINAHGSSTPLNDPTETSSIRQVFGDHADRV
                     ALSGTKGYYGHALGASGAFEAAICALASRHRWFPPTVNLERPDPACDLDHVTGEGRRL
                     DPDYVLSNSFGFGGIN"
BASE COUNT          557 a         1666 c         1679 g          668 t
ORIGIN      
        1 gccggggccg ccttcctcgc ctgggtcgcc tggcggtggc tctgtccctg ctcctgatcg
       61 caagcgcggg ttgcggcgag agcggcgcca ccggtcccca gcgacccggc gagaataccg
      121 gcaccaatga tagcgtgacc ccggccgacc ggctggcggg aacctggcgc gcgacggtcc
      181 tgatcgaggt gcccggggac gtccaggcct ggatcacgac ctgggagttc gactccgacg
      241 gcacctgcct gcagattgcg gaggtccgct cggtggtcga aagcactccc cgcgtgaccg
      301 agcgaccctg cacgttcacc gcggacggct tcgagatcgc gataacctat accgggggtt
      361 ccaccctcac attcaactac gccttccctc tgttctcctc cgaccggctg atcctcgatg
      421 gcctcgagta cgagcgcgtc gtcccctgag cttgcccggg ccgacgtgct cgtggtcggc
      481 ggggggccgg cggggagcgc caccgcccac ctcctcgccc ttgcgggccg ctccgtcctg
      541 ctagtggacc gcgccgcttt cccccgcgag aaagcgtgct cggagtacat gggcccggag
      601 gcggtgcgca tcctcgaccg gttgagcgtg atcggggggc tggaagcagg cggggcggtc
      661 ccgctgagcg ggacggccgt cacggccgcc catggggccc gactccacgg tcgcttcgca
      721 ctcgcggggc accgaccctt ccgccctacg gggctctccg tgtcccggcg gatcctcgac
      781 ctccggctcc tcgaggcggc ccgcgcggcg ggggtgacgg tgctggagcg cacggcggta
      841 gagtcgctgg tgtacgatgc tggcggcgtc gccggggccg tggcccgcac cgccgacggc
      901 cgtcggggca ccatcaccgc ccgtttgacc gtaggcgcgg acggactccg ctccgtcgtg
      961 ggacggaggc tgggcgggcg gcaccggggc ggtctccagc gggtggcctt cgtcggccac
     1021 gtggaggggg tggaaggcat gggcgactcc gcggagatgt tcgtcggaag acgaggctat
     1081 gtcgggctca atccgatcgg cggagggctc accaacgtgg cgctggtggt cccgctttcg
     1141 cgcgccggtg ccgcgcgagg gcgaaccgaa gagttcttct gcgaggcact ggcggacttc
     1201 ccgggaccga gccgccgggt cacgcgcggg cggctggtcc gccgcgtgct cgccaccggg
     1261 ccattcgcca cgtggtcggc gcgggtgacg gtggagggtg ccgccctggt gggcgatgcg
     1321 gccgacttct tcgacccatt caccggcgag ggcatctaca gcgcgctgca tggggccgaa
     1381 ctccttgcga cggccgccga cgcggccctc gagcagcccg gccgggtgac cgcctccgcc
     1441 ctcgcgccct atcgccacgc ccgtcggcgc gccttcgggg gcaaatgggc ggtcgagcgg
     1501 ctgatcggct acggcatgca ctttcccacc ctgttcgacc gagcggtggg acggctcgcc
     1561 cggcggggcc tcgcccacac gctcgtcggc gtcaccgccg acttcgtgcc cccgagcgcg
     1621 gtgctcaacc cggtctttct cgccaggatg ctgctctgaa cgccaccgac gtgaatccgg
     1681 cccagttccg cgagctgatg gggcgcttcg ccaccggcgt caccgtcctc acggtgagcg
     1741 gccccggcgg ccgtccgctg gggatgacgg cgagcagcct cgcgtcggtg tcgctggttc
     1801 cgccgctggt ctccgtgtgc atcgaccacg aggccgagct gcacgacagc atcctcgcgg
     1861 cgtcggtctt cgtggtgaac gtgctggaga gccggcagga gacgctctcc cgtcgcttcg
     1921 ccgaccggca cgaggaccgc ttcgagggcg tgggctatca ccgcagtccc gatggactgg
     1981 tcctgctgga cggcgcgctg gcccacatcg agtgcgaccg gttcgccagc taccccgccg
     2041 gagaccacac catcatcatc ggccgggtga tcggcggctc caccggcgag ggccggccgc
     2101 tgctctacta tcgcggcggg tacggcggcc tcggatgacc gccggagacc tgggcatctc
     2161 ctccctcggc accgagctgc tcgatgatcc cggcgccgat cccgccgcgg tcacgctgtc
     2221 gctccgcaac gtggcccgcg ccaaccgctg gttcggcggt gcggcggcgg tgcggcacgg
     2281 gctggggcgg gtgttgcggg gcgcgacgcc gggacggccc ctcaccctcc tcgacctggg
     2341 caccggcgcg ggcgatctcc cccggcgcgc cgtcgcctgg gcccggcgcc gggggtacgt
     2401 cctgcacccc ttcggcctgg agctgagccg gccggcggcg gcgctggcgg ccaccgcggg
     2461 cgtgccctgc gcggtgggct ccgcggggtc gccaccgctg cgggacaagt cggtcgacat
     2521 cgtgctgctg agtcaggtgg cccatcactt cacccccgac tccgcggtcc gcctgttccg
     2581 cacctgcgac gggctggccc gggtcggtgt cgtggtcgcc gatctccggc gagcgcccct
     2641 cgcggcgctc gcgttccgcg taggcgcgac cgcgctccgg ttcgacccca tcacgatcgc
     2701 ggacgggatc acctcgatcc ggcgcggcta cacggccggc gagctccgcg cgctgctcgc
     2761 ggcggccggg gtgcgggccc gggtgtcgcg gcggccgggg tatcggctgg tggcgacgtg
     2821 gatcccggga gtcgtaggtc aaaggagcga tcggccatga gcgcgtcacg acggagaccc
     2881 gcgacgtgag gaccgtggac cacacccaca tgggcgcccc ggtggagcgg gtgttcgagg
     2941 ccgcggccga cgtggagcgc tggccggagc tgctcccgca ctaccgctgg gtccgcatac
     3001 tcgatcggcg cgcagaggtg gcggtggtgg agatggccgc ctggcgcccg ttcgggccgg
     3061 tgggctatcc cacctggtgg gtgtccgaga tgcggctgga ccacgcggcg cccgcggtgc
     3121 actaccgaca cgtccgcggc atcacgcggg gcatggacgt cgcctggcgg ttcgtctccg
     3181 ctggcggggg caccgacgtc agcatcgtcc acgactgggc cgggccggcc tggcccctga
     3241 tctcgaggcc cgccgcggag ctggtgatcg gccccgtgtt catccatggc atcgcctccc
     3301 gcacgctcgc cgggatcaga cggcacgtcg aagcggcggg gcgaccatga gtgcaggacc
     3361 gccgcgccgc cgggtggtgg tgaccggcat cggcgccgtg accccgatcg gcctcggcgt
     3421 cgaggggctg tggggggggc tccgggaccg ccgctccgcc atccgcgcga tcagtcggtt
     3481 cgaccccagt gctttcaagt cccgcatcgc gggcgaggtg gacgggttcc accccaccga
     3541 ccacatcgag gagcgccgcg cccgccggct ggatcgctac tcccagttca ccattgcgtc
     3601 cacccggatg gcgctcgcgg acgcgcacct cgacctgcga cgcgaggact gcgatcgggt
     3661 gggggcgatg atgggcaccg cgctcggggg cgtggcctac ggcgaggcgc agtaccacgc
     3721 cttcctcacg cagggcccgc gtgcggtcga ccccgcgctc gcgctcacgg tcttcgccgg
     3781 tgcggcgagc tgcaacatcg ccatcgagtt cggctgcacc ggccccaacg cgaccaacgg
     3841 gatgagttgc gcctcgggcg ccatcgcgat cggcgagggc ttccgcgcca tcgcccgggg
     3901 cgaggcggac gtgatgatcg ccggcggggc ggaggcaccg cttgcgccgc tctgcttcgg
     3961 cgcgttctcc atcatccgcg ccatgtccac ccgcaacgac gagccggcgc gggccagccg
     4021 gcccttcgac gccgaccggg acggtttcgt catggcggag ggcgccgcgg tgctggtact
     4081 ggaggagcgg gagcgcgcac tggcccgcgg ggcgccggtc tacatcgagc tctgcgggta
     4141 cggcctcacc aacgacgcct accacatgac cgcgccgcgg ccggacggga gtcaggccgc
     4201 gcgctgcatg cgcaacgcgc tggccgaggc cggcgtgtcg gcgggcgagg tggggtacat
     4261 caacgcccac ggatcctcca ccccgctcaa cgatccgacg gagacctcct cgatcaggca
     4321 ggtgttcggg gaccacgcgg accgggtggc cctgagcggg accaaggggt attacggtca
     4381 cgccctgggc gcgagcggcg ccttcgaggc cgccatctgc gcgctggcca gccgacatcg
     4441 ctggtttccc cccacggtca acctcgagcg ccccgatccg gcctgcgatc tcgaccatgt
     4501 caccggcgag ggccgccgcc tcgaccccga ctacgtgctg agcaactcgt tcgggttcgg
     4561 gggaatcaac
//
LOCUS       DASUYN010000448         2548 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1240684, whole genome shotgun sequence.
ACCESSION   DASUYN010000448 DASUYN010000000
VERSION     DASUYN010000448.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2548)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2548)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2548
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1240684"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1712)
                     /locus_tag="VF061_08780"
     CDS             complement(<1..1712)
                     /locus_tag="VF061_08780"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX6669638.1"
                     /translation="MNVAIVGAGPAGLYLAILLKRDDPGHRVTVYERNRVEDTFGFGV
                     VFSDETLENVGEADAETNRAMAAAAARWEDIEIHYRGTVMRSTGHRFSGLERKTLLEL
                     LARRAQTLGVEIHWRTEIRELSDCGLPQADLVVAADGVASAVRDRLSAEVQPQIDWRS
                     NRFVWLGSTRPFPAFTFYFKPSPAGLWRTHAYQYAPGHSTFIVEAREDTWKASGLAED
                     DEAGTVAHLERLFAAELEGHPLLANRSIWRRFPTVRNARWHSGNVVLLGDAAHTAHFS
                     VGSGTKLAMEDAIALAAALKDGSPVPEALASYEAARRPQVESLQRAAQASLEWFESVE
                     RYHDTEPLQFAFNLLTRSLRITHENLRLRDPALVERVDRRFAERASAQSGRPVPTDPC
                     PPPLFTPYRLRDLVLPNRIVVSSMCQYRADDGMPNDWHLVHLGSRAIGGAGLVMTEMT
                     DVSREGRISPGCAGMYLREHVTGWRRIVEFVHRESEAKIGIQLSHAGRKGSTRVLWEG
                     EDEPLPEGNWPLIAPSPIPYQPHNQTPREMTRADMDRSRPISSGPRACPTSRGSTSWS
                     CTWRT"
     gene            complement(1709..>2548)
                     /locus_tag="VF061_08785"
     CDS             complement(1709..>2548)
                     /locus_tag="VF061_08785"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX6669639.1"
                     /translation="LARAGRLDDAVAEFDHAMRLEPGSPKAAFAAALYHLRLRRDAEA
                     MRAFDRAIALAPDYHMVKVIKGHTYLRWKGTPDTLAAAMGSVPVDWDPDGMATWARYT
                     ALWTQRRYADALAMLERSRTALSRDGLVYQPMPLMRARLYDWMGAREPARAHYQRARA
                     VLEDSAAAHPDDASIRIPLGLAYAGLGRTADAMREARRAMELVPVASNTMAATAFMGG
                     AVEVFAKAGELDAALELLELLFSMPAGREVTIAFLRVWPGFDPLRGDPRFEELLTRFA
                     AVR"
BASE COUNT          358 a          930 c          892 g          368 t
ORIGIN      
        1 gtgcgccagg tgcagctcca ggaggtcgaa ccccgactcg tcggacatgc gcgcggcccg
       61 gacgaaatcg gccgtgacct gtccatgtcg gcccgggtca tctcgcgggg ggtctggttg
      121 tggggctggt acggaatggg cgacggggcg atcagcggcc agttgccctc cggcagcggc
      181 tcgtcctccc cctcccacag cacccgggtg gaccccttcc tgcccgcgtg cgacaactgg
      241 atgccgatct tcgcctcgct ctcccggtgg acgaactcca cgatccgcct ccacccggtg
      301 acgtgctccc ggagatacat ccccgcgcag cccggcgaga tccgcccctc ccggctcacg
      361 tcggtcatct cggtcatcac caggccggcg ccgccgatcg cgcggctgcc caggtggacg
      421 agatgccagt cgttcggcat cccgtcgtcc gcgcggtact ggcacatcga ggagaccacg
      481 atccggttgg gcagcaccag atcgcgcaac cggtagggcg tgaacagcgg aggagggcag
      541 gggtccgtcg ggaccggacg cccgctctgc gcgctcgccc tctccgcgaa ccggcggtcc
      601 acccgctcga ccagggcggg atcgcgaagc ctcaggttct cgtgggtgat gcggaggctg
      661 cgggtgagca gattgaacgc gaactggagc ggctcggtgt cgtggtagcg ctccaccgac
      721 tcgaaccact cgaggctcgc ctgggccgcg cgctggaggc tctccacctg cgggcggcgg
      781 gcggcctcgt agctcgccag cgcctcgggc accggcgatc cgtccttgag agccgccgcc
      841 aacgcgatcg cgtcctccat cgccagcttg gtgcccgagc cgaccgagaa gtgcgccgtg
      901 tgggcggcgt cccccagcag caccacattg cccgagtgcc agcgcgcgtt ccgcaccgtg
      961 gggaaccggc gccagatgga gcggttggcg agcagcggat ggccctccag ctcggccgcg
     1021 aacaaccgct ccaggtgcgc gaccgtcccg gcctcgtcgt cctcggcaag accgctcgcc
     1081 ttccaggtgt cctccctcgc ctcgacgatg aaggtcgaat ggccgggggc gtactggtag
     1141 gcatgggtgc gccagagccc ggcgggagac ggcttgaagt agaaggtgaa cgcggggaag
     1201 ggccgggtgc tgccgagcca gacgaagcgg ttgctgcgcc agtcgatctg cggctggacc
     1261 tccgccgaca gccggtcccg cactgcgctg gccacgccgt ccgccgccac gaccaggtcg
     1321 gcctgcggga ggccgcagtc cgacagctcg cggatctccg tccgccagtg gatctcgacc
     1381 ccgagcgtct gggcccgcct cgccaacagc tccagcaggg tcttgcgctc caggccggag
     1441 aaccgatgcc cggtggaccg catgacggtc ccccggtagt ggatctcgat gtcctcccac
     1501 cgcgcggcgg cggcggccat cgcgcggttg gtctcggcgt cggcctcgcc gacgttctcg
     1561 agggtctcgt cggagaagac caccccgaag ccgaaggtgt cctccacccg gttccgctcg
     1621 tagaccgtga cccgatgacc cgggtcgtcg cgcttgagga ggatggcgag gtacagcccg
     1681 gcgggtcccg cccccacgat ggcgacgttc accgcacggc cgcgaagcgc gtcagcagct
     1741 cttcgaaccg aggatcgccg cggagcgggt cgaagccggg ccagacgcgc aggaaggcga
     1801 tggtgacctc ccgtcccgcg ggcatggaga acagcagctc gagcagctcg agcgccgcgt
     1861 ccagctctcc ggccttggcg aacacctcga cggccccccc catgaatgcc gtcgcggcca
     1921 tggtgttgct cgccacgggc accagctcca tcgcccgccg cgcttcccgc atcgcgtcgg
     1981 ccgttcggcc cagcccggcg taggccaggc cgagggggat tcggatgctc gcgtcatccg
     2041 ggtgagcggc tgcactgtcc tcgaggaccg cgcgcgcccg ctggtagtgc gcccgtgccg
     2101 gctctcgcgc tcccatccag tcgtacagtc gggcgcgcat caggggcatg ggctggtaca
     2161 ccaggccgtc ccggctgagc gcggtccggg accgctccag catggcgagc gcgtccgcgt
     2221 agcggcgctg ggtccagagc gccgtgtagc gggcccaggt cgccatgccg tccggatccc
     2281 agtccaccgg cacgctgccc atggcggccg cgagcgtgtc gggcgttccc ttccagcgaa
     2341 ggtacgtgtg tcccttgatc accttgacca tatgatagtc gggcgcgagc gcgatggccc
     2401 ggtcgaacgc acgcatcgcc tccgcgtccc gccgcaggcg aaggtggtag agggctgccg
     2461 cgaaggccgc cttcggactg ccgggctcca gccgcatggc gtggtcgaac tcggccacgg
     2521 cgtcgtcgag acggcccgcc cgcgccag
//
LOCUS       DASUYN010000449         4232 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_577561, whole genome shotgun sequence.
ACCESSION   DASUYN010000449 DASUYN010000000
VERSION     DASUYN010000449.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4232)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4232)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4232
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_577561"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(105..311)
                     /locus_tag="VF061_08790"
     CDS             complement(105..311)
                     /locus_tag="VF061_08790"
                     /inference="COORDINATES: protein motif:HMM:NF039472.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6494 family protein"
                     /protein_id="HEX6669640.1"
                     /translation="MDEERFNISLRKLLKHFGVTAQREVEKAVQAALDSGRLSGSEVL
                     QARIELRVDGLPTDISVEGRIELA"
     gene            complement(371..640)
                     /locus_tag="VF061_08795"
     CDS             complement(371..640)
                     /locus_tag="VF061_08795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669641.1"
                     /translation="MTTSPETAWMNHPAIRALVDQAAALALEERITLVKGLIPGIADA
                     LSEEEYERFVTFIRLKGERYHEAKSHPGEGRAERLTPGDRELEGR"
     gene            complement(722..2257)
                     /locus_tag="VF061_08800"
     CDS             complement(722..2257)
                     /locus_tag="VF061_08800"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: protein motif:HMM:TIGR02037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Do family serine endopeptidase"
                     /protein_id="HEX6669642.1"
                     /translation="MKFGGLVALAFALGLLFAGLLDLPSRSSAQQSRTAALPQVPAPT
                     IPAARPLQDLSESFAAVAEHVKPSVVYIRSQRTERAAPQRVPPGMERFFPRFRQQPEI
                     EQGSGSGFLVSRDGYILTNNHVVEGAEQVTVRLLDRREFKAKVVGSDPNTDVAVLKID
                     ASNLPPMALGNSDDARVGEWVLAIGNPLGEGLTFTVTSGIVSAKGRALNGLPRAGQGS
                     IQDFIQTDAAINPGNSGGPLVSVRGEVIGINSAIASETGFYSGYGFAIPINLARTVMN
                     QLIESGKVHRAALGVSIAEVTLTDAEYVGLPAIRGVVVKDIPSEDSPARAAGIEAGDI
                     IVAVDGKPVEYVGQLQQIIGFRKPGEVVKVEVARKGGARKTIDVKLQALNDAPQVASR
                     DTPGGPGEAAEEGAAMNRLGISVEPVSPDAAVELQLPADTRGLIVTDVVPGGPAWEVL
                     LDDPQRGGPDIILSIEGKLVRTEADLRKALLAEKPGSIVTLRVYNARAQNRRVERIRL
                     GSD"
     gene            2472..3497
                     /gene="deoC"
                     /locus_tag="VF061_08805"
     CDS             2472..3497
                     /gene="deoC"
                     /locus_tag="VF061_08805"
                     /EC_number="4.1.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004139 - deoxyribose-phosphate aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0009264 - deoxyribonucleotide catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
                     /protein_id="HEX6669643.1"
                     /translation="MAEPSEPRAVVPAPAPSRAEPMDVPVTPRNPGMPLDLEWLEEVR
                     VNRNAVERRAATLRTRRTVKKEWQAAWLLRAVTLMDLTTLSSDDTPGRVRRLCAKARQ
                     PVRADLLEALGAEQLPIRVAAVCVYHAFVETAVRALEGSGIPVAAVSTGFPAGLSPFE
                     QRIGEIRASVAAGAEEIDIVITRAHVLTGNWRALYEEVRAMREACGDAHIKTILGTGE
                     LGTLRNVAWASRVCMMAGADFIKTSTGKESVNATLPVGLVMARAIRDYGERTRHRVGL
                     KPAGGIRTAKDALDWLVLVKEELGDRWLRPDLFRFGASALLTDVERQLEHFVTGRYSA
                     GYRHPTG"
     gene            3518..>4232
                     /locus_tag="VF061_08810"
     CDS             3518..>4232
                     /locus_tag="VF061_08810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEX6669644.1"
                     /translation="MASIPELFSTMAYGPAPEAVAPAQAWLERHGRRFGLFVGGAWTE
                     PGGETFETLNPATGKPLAALTQASEADVDRAVRAARAAQADWWKLGGHARARHLYALA
                     RHVQKQSRFFAVLESLDNGKPIRESRDIDIPLVARHFYHHAGWAQLMARELPGRVPVG
                     VVGQIIPWNFPLLMLAWKIAPALAMGNTVVLKPAEFTSLTALRFAELCEEAGLPPGVV
                     NIITGDGRTGAALVAHPDVD"
BASE COUNT          595 a         1499 c         1509 g          629 t
ORIGIN      
        1 ccaggtcgcc gccgccgcac gcgccggtgc ccagggcgag cgccgccgcc caggatcgta
       61 tccgccgcct catgctccgc actccgatcg caggtggggc gcgctcacgc cagctcgatc
      121 cggccttcga ccgagatgtc ggtcggaagc ccgtccaccc gcagttcgat ccgagcctgc
      181 agcacctcac tgccgctcag cctgccggag tcgagcgccg cctggaccgc cttctccacc
      241 tcgcgctgcg cggtgacgcc gaaatgcttg agcagcttgc ggagggagat gttgaaccgc
      301 tcctcgtcca tgaaataatc ctcgttgccg tggtccaaat cctacacagc ccggccccgc
      361 ggctgaaccc tcagcgcccc tccagctccc ggtcaccggg cgtgagccgc tcggcgcggc
      421 cctcgcccgg atgggacttg gcctcgtggt agcgctcgcc cttgagtcgg atgaaggtga
      481 cgaagcgctc gtactcctcc tcggacagcg cgtccgcgat gccgggaatg agtcccttca
      541 ccagggtaat ccgctcctcc agcgcgagcg cggcggcctg gtccaccagg gcccgaatcg
      601 cggggtggtt catccaggcg gtttccggcg aggtggtcat cgggtgctcc ggggggcggg
      661 ggccgggtga cagcgagggc cgcacgagcg gcccccggtg atcatgcgcg tcctggtgcg
      721 actagtcgct gccgagccgg atccgctcga cccggcggtt ctgggcccgg gcgttgtaca
      781 cgcggagggt gacgatgctg cccggcttct ccgccaggag ggccttccgg agatcggcct
      841 cggtgcggac cagcttccct tcgatcgaga ggatgatgtc gggaccgccc cgctggggat
      901 cgtcgagcag cacctcccag gccggaccgc cggggacgac gtcggtcacg atcagcccgc
      961 gcgtgtcggc ggggagctgg agctcgaccg cggcgtcggg actcaccggc tcgacactga
     1021 tcccgagccg gttcatcgcg gccccctcct ccgccgcctc gcccgggccg ccgggcgtgt
     1081 cgcgcgaggc gacctgcggg gcgtcgttga gcgcctggag cttgacgtcg atggtcttcc
     1141 gcgcgccccc cttgcgggcg acctccacct tgaccacctc gcccggcttg cggaagccga
     1201 tgatctgctg cagctgaccc acgtactcca ccggcttgcc gtccaccgcg acgatgatgt
     1261 cacccgcctc gatccccgcc gccctggccg gcgagtcctc gctggggatg tccttcacca
     1321 ccacgcccct gatcgccggc aggccgacgt actcggcgtc ggtgagcgtg acctccgcga
     1381 tggagacgcc gagcgccgca cggtgcacct tgcccgactc gatcagctgg ttcatgaccg
     1441 tccgggccag gttgatcggg atggcgaagc cgtagccgga atagaacccg gtctcgctgg
     1501 cgatcgcgga gttgatcccg atcacctcgc cccggacgct gaccagcggc ccgccggaat
     1561 tgccggggtt gatcgcggcg tcggtctgga tgaagtcctg gatgctgccc tgaccggcgc
     1621 ggggcagacc gttcagcgcc cgacccttcg cgctcacgat cccggaggtg acggtgaagg
     1681 tgaggccttc gcccagcggg ttgccgatgg cgaggaccca ttcgcccacc cgggcatcgt
     1741 cgctgttgcc cagcgccatg ggcggcaggt tggaggcatc gatcttgagg acggcgacat
     1801 cggtgttggg gtcgctgccc acgaccttgg ccttgaactc cctccgatcg agcaggcgca
     1861 cggtgacctg ctccgcgccc tccaccacgt ggttgttggt gaggatgtag ccgtcgcggg
     1921 agacgaggaa gccggagccg ctgccctgct cgatctcggg ctgctggcgg aagcggggaa
     1981 agaaccgctc catccccggc gggacccgct ggggcgcggc gcgctcggtg cgctgggagc
     2041 ggatgtacac cacgctcggc ttcacgtgct ccgccaccgc cgcgaacgat tcgctgaggt
     2101 cctggagcgg cctggccgcc ggaatcgtgg gcgccggcac ctggggcagc gccgccgtgc
     2161 gggactgctg ggccgacgag cggctcggga gatcgagcag tccggcgaac agcagaccga
     2221 gggcgaaggc gagcgccacc agccctccga acttcaacca gttcaacgat cgagcggaca
     2281 tcagcggtcc ttcggtagga cggtggagtc gggcatgcaa ctcattcccc ataatagtac
     2341 aacggaaatc ggcgactggt gtcgggtcgc ggcggaccgg gtcgatggcc tgcgcctgtc
     2401 gaattggcag ctgaggctgg gaagaccggc gcatggcgtc ggcctcgtcc cgcctgatat
     2461 gttgaggggc catggccgag ccctccgagc ccagagccgt cgtccccgct cccgccccct
     2521 ccagggcgga gccgatggac gtgccggtca ccccgcgtaa ccccgggatg ccgctggacc
     2581 tggagtggct ggaggaggtg cgggtgaacc ggaacgcggt ggagcgccgg gccgccaccc
     2641 tccgcacccg gcgcacggtc aagaaggaat ggcaggccgc ctggctgctt cgggcggtca
     2701 ccctgatgga cctgaccacc ctctccagcg acgacacccc gggtcgggtg cggcggctct
     2761 gcgccaaggc gcggcagccg gtccgggccg atctgctcga ggccctcggc gcggagcagc
     2821 ttccgatccg ggtggcggcc gtgtgcgtgt accacgcgtt cgtcgagacc gcggtgcgtg
     2881 cgctcgaggg cagcggcatt ccggtcgccg cagtctccac cggctttccc gcgggtctct
     2941 ctcccttcga gcagcggatc ggcgagatcc gggcgtcggt ggccgccggg gcggaggaga
     3001 tcgacatcgt catcacccgg gcccacgtgc tcaccggcaa ctggcgcgcc ctgtacgagg
     3061 aggtacgcgc gatgcgggag gcctgcggcg acgcccatat caagacgatc ctgggcaccg
     3121 gggagctggg caccctccgc aacgtcgcct gggccagccg ggtgtgcatg atggccggcg
     3181 ccgacttcat caagacctcg accggcaagg agagcgtgaa cgccaccctg ccggtggggc
     3241 tggtgatggc gcgcgcgatc cgggactacg gggagcggac gcgtcaccgg gtcgggctca
     3301 agcccgcggg cggcatccgc accgcaaagg acgcgctgga ctggctggtg ctggtgaagg
     3361 aggagctggg cgatcgctgg ctccggcccg acctgttccg cttcggggcc agcgcactgc
     3421 tcacggacgt cgagcggcag ctggagcact tcgtcaccgg gcggtactcg gcggggtatc
     3481 ggcacccgac ggggtgaccg cgccacccag gagacctatg gcatccattc ccgagctctt
     3541 cagcaccatg gcctacggcc cggcgccgga ggcggtcgcc ccggcgcagg cctggctcga
     3601 gcgccacggg cgtcggttcg ggctcttcgt cgggggcgcg tggaccgagc cgggcgggga
     3661 gaccttcgag accctgaacc ccgccaccgg caagccgctc gcggccctga cgcaggcgag
     3721 cgaggccgac gtggaccggg ccgtgcgcgc cgcgcgcgcg gcgcaggccg actggtggaa
     3781 gctcggcggg cacgcccggg cacgccacct ctatgcgctc gcgcgtcacg tgcagaagca
     3841 gagccgcttc ttcgcggtcc tggaatccct cgataacggc aagccgatcc gcgagtcgcg
     3901 cgacatcgac atcccgctgg tggcgcggca cttctaccac cacgcggggt gggcccagct
     3961 catggcgcgc gagctgcccg gccgggtgcc cgtcggcgtc gtgggccaga tcattccgtg
     4021 gaacttcccg ctgctgatgc tggcgtggaa gatcgcgccc gcgctcgcga tggggaacac
     4081 ggtggtgctg aagccggcgg agttcacctc gctcaccgcg ctccgcttcg ccgagctgtg
     4141 cgaggaggcg ggactgcccc cgggcgtggt caacatcatc accggcgacg ggcgaaccgg
     4201 cgcggccctg gtggcccatc ccgacgtcga ca
//
LOCUS       DASUYN010000450         3388 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_137009, whole genome shotgun sequence.
ACCESSION   DASUYN010000450 DASUYN010000000
VERSION     DASUYN010000450.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3388)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3388)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3388
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_137009"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..697)
                     /locus_tag="VF061_08815"
     CDS             complement(<1..697)
                     /locus_tag="VF061_08815"
                     /inference="COORDINATES: protein motif:HMM:NF012686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+:solute symporter"
                     /protein_id="HEX6669645.1"
                     /translation="MTLSPSDWLIIALYFVVSAAIGLAYTRRASQSLADYFVTGRSLP
                     WWLAGTSMVATTFAADTPLAVAGLVAKYGVAGNWLWWNGALSGILTVFFFSRLWRRAG
                     VLTDVEFAELRYGGRPAAVLRGFRGLYLALPINLIIMGWVTRAMVTILGITLDVDPWI
                     AAVALFGITAVYSVFAGIWGVIVTDVFQFVVAMAGSILLAVLAVEWIGGLDALVDQSA
                     RHYGSAEAAFGVIP"
     gene            complement(694..2457)
                     /locus_tag="VF061_08820"
     CDS             complement(694..2457)
                     /locus_tag="VF061_08820"
                     /inference="COORDINATES: protein motif:HMM:NF013126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /protein_id="HEX6669646.1"
                     /translation="MRPVHAKLLTLVMVSLCACGGGPGVAPAAPQPGPFRPDVRALPS
                     VDELVASLSVRDRIAQLVVPWIPGTYAAYDAEAFARMQEWVDSLHVGGLIVSVGSPLD
                     IAAKLNRLQERSALPLLIASDLEGGTSIRFNGGTPLPPNMGVAAAGSDSLAYAMGRIT
                     ALEGRAVGIHLAFAPVADVNNNPGNPIINTRSYGEDPATVARMVAAEVRGLQDHGMLA
                     TAKHFPGHGDTGTDSHLALPVITADWRRLDSVELVPFRSAIEAGVKVVMSAHIALPGV
                     DRGELRPGTVAPNILTGILRDSLRFEGLVVTDALDMAGVARAYGNEAALRAFLAGADL
                     LLQPGDPAAAIAGMEAAVARGDIAPERLERSLRRVLQAKLDLGLFERRTVPLDSVPAV
                     VGRTRFVEQARAIAARSIVMVKDVGGTVHGLRSAKPPITVVTFGEEDNRSVGLALAAE
                     LRRHGLPVATFRLWPGSGAASYDSAAAALARRPVSLFVTADKPTAWRGAIGLPERLSS
                     LISAAARTGPTILVSLGNPYLISGLPEVGSYLVGWRSNPVTEEAVARALAGAAPITGR
                     LPISIPPLYARGWGVERRVSP"
     gene            2443..>3388
                     /locus_tag="VF061_08825"
     CDS             2443..>3388
                     /locus_tag="VF061_08825"
                     /inference="COORDINATES: protein motif:HMM:NF018743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1343 domain-containing protein"
                     /protein_id="HEX6669647.1"
                     /translation="MHRSHVLLLGVLCGPVGCVGQGGAGAPAERAAPGAVRPGIDVLL
                     ADSASLVRDRGVGLVTNQSGVDASGVSDVVRLQAAGVRLVALFSPEHGFRGAADPGAA
                     VASSVDSATGLPIYSLYGRTSAPTDEMLAGIDVLLVDLQDAGARYYTYITTTVDVMQA
                     AVGQGIPVVVLDRPNPIGGAVQGNVLEEAHISPVGRLRVPMRHGLTLGEMARLARSDL
                     GIGGELVVVPAAGWRRPMALDQTGLPFIPPSPNLRTLESLFHYPGTCLFEGTNLSVGR
                     GSDAPFEQVGAPWLDTAAVLADLRRAAPRGVRASGVTFT"
BASE COUNT          506 a         1182 c         1270 g          430 t
ORIGIN      
        1 gcggaatcac cccgaacgcc gcctccgccg atccgtagtg ccgcgcggac tggtccacca
       61 gcgcgtcgag tccgccgatc cactccaccg cgaggacggc gagcaggatc gacccggcca
      121 tcgcgaccac gaactggaag acgtcggtca cgatcacacc ccagatcccc gcgaacacgc
      181 tgtagaccgc ggtgatgccg aagagggcga cggccgcgat ccagggatcc acgtcgaggg
      241 tgatgcccag gatcgtcacc atcgcccggg tgacccagcc catgatgatg aggttgatgg
      301 gcagcgcgag atacagcccg cgaaatccgc ggagcactgc cgccggacgc ccgccatagc
      361 gcaactcggc gaactcgacg tcggtcagca ccccggcccg gcgccagagc cgggaaaaga
      421 agaagacggt caggatcccc gacagcgcgc cgttccacca gagccagttg cccgccactc
      481 cgtacttcgc gaccaggccg gcgaccgcca gcggcgtgtc ggccgcgaac gtggtcgcca
      541 ccatcgaggt cccggccagc caccacggca gcgagcggcc ggtgacgaag tagtcggcca
      601 gggactggct cgcccgccgg gtgtaggcca gcccgatggc ggcggagacc acgaagtaga
      661 gggcgatgat cagccagtcc gagggcgaga gtgtcatggc gagacccggc gctccacgcc
      721 ccagccacgg gcgtacaggg gagggatgga gatcggcagg cgtccggtga tcggcgccgc
      781 gccggccagc gcgcgcgcca ccgcctcctc cgtcaccggg ttcgagcgcc agccgaccag
      841 gtaggagccg acctccggca gtccggagat gagataggga ttgcccagcg acaccagaat
      901 cgtgggaccg gtccgcgccg cggcggagat gagcgacgaa agccgctcgg ggaggccgat
      961 cgctccccgc cacgcggtgg gcttgtccgc ggtgacgaac agcgacaccg gacggcgggc
     1021 cagggcggcg gcggcggagt cgtagctggc ggccccgctc ccgggccaga gccggaaggt
     1081 cgccaccggc aggccgtggc gtcgcagctc ggccgcgagg gcgagcccga ccgagcggtt
     1141 gtcctcctcg ccgaaggtga ccaccgtgat cggcggcttg gccgagcgga ggccgtggac
     1201 cgtgccgccc acatccttca ccatgacgat ggagcgtgcc gcgatcgcgc gggcctgctc
     1261 cacgaagcgg gtgcggccca ccacggcggg cacgctgtcg agcggcaccg tccgccgctc
     1321 gaagaggccg aggtccagct tggcctgcag gacccggcgc agcgagcgct ccagccgctc
     1381 gggtgcgatg tcgccacgcg ccacggcggc ctccatcccg gcgatggcgg ccgcggggtc
     1441 gccgggctgg agcagcaggt cggccccggc gaggaacgcc cgcagtgccg cctcgttgcc
     1501 gtaggctcgg gcgaccccgg ccatgtccag ggcatcggtc accaccaacc cctcgaatcg
     1561 gagcgagtcg cggaggatgc cggtgaggat gttgggggcg acggtgccgg gtcgaagctc
     1621 gccccggtcc acgccgggca acgcgatgtg ggcggacatc accaccttca cgccggcctc
     1681 gatggcgctg cggaagggga ccagctcgac cgagtccagc cgccgccagt cggccgtgat
     1741 caccggcagc gcgaggtgcg aatcggtgcc ggtgtcgccg tggccgggga agtgcttggc
     1801 ggtggcgagc atcccgtggt cctggagccc gcgcacctcg gccgccacca tgcgggcgac
     1861 ggtcgccggg tcctcgccgt aggagcgggt gttgatgatg ggattgccgg gattgttgtt
     1921 gacatcggcg accggcgcga aggcgagatg gataccgacg gcccggccct cgagagcggt
     1981 gatgcgcccc atcgcgtacg cgaggctgtc gctccccgcg gccgccacac ccatattggg
     2041 aggcagcggc gtcccaccgt tgaaccggat gctggtgccg ccctcgagat ccgaggcgat
     2101 gaggagcgga agggcggagc gctcctgcag gcggttcagc ttggccgcga tgtcgagcgg
     2161 cgatcccacc gagacgatca agccgcccac gtggagcgag tccacccact cctgcatccg
     2221 ggcgaaggct tcggcgtcgt aggcggcgta ggtgcccggg atccagggca ccaccagctg
     2281 cgcgatccgg tcgcgcacgg acagactcgc gaccagctcg tccacgctgg gcagggcgcg
     2341 cacgtcgggc cggaaaggcc cgggctgggg cgccgccggg gcgactcccg ggccgccgcc
     2401 gcaggcgcag agcgatacca tcacgagcgt gaggagcttg gcgtgcaccg gtctcatgtc
     2461 ctgctgctgg gggtgctgtg cggtccggtc ggctgcgtcg gccagggcgg cgccggggcg
     2521 cccgcggaac gggcggcgcc gggcgcagtc cggcccggca tcgacgtgct gctcgccgac
     2581 agtgcgagtc tggtccgcga ccggggggtc ggcctggtga ccaaccagtc gggcgtggat
     2641 gcgagcggtg tcagcgacgt ggtgcgtctg caggcggccg gagtccggct ggtggcgctc
     2701 ttcagccccg agcacggctt tcgcggcgcg gccgaccccg gcgccgccgt cgcgtcgtcg
     2761 gtggattcgg ccactgggct cccaatctac agcctttacg gcaggacttc cgccccgacc
     2821 gacgagatgc tcgccgggat cgacgtgctg ctggtggacc tccaggacgc cggggcccgg
     2881 tactacacct atatcacgac caccgtggat gtgatgcagg cggcggtcgg acaggggatc
     2941 ccggtggtcg tcctcgaccg ccccaatccg atcggcgggg cggtgcaggg caacgtcctg
     3001 gaggaggcgc acatctcgcc ggtgggccgg ctgcgcgtgc cgatgcggca cgggctcacg
     3061 ctcggtgaga tggcccggct cgcccggagc gatctgggga tcggcgggga gctggtggtg
     3121 gtgccggccg cgggatggcg ccggccgatg gccctggacc agaccggtct ccctttcatc
     3181 ccacccagcc ccaatctgcg gacgctggag agcctgttcc actatcccgg cacctgtctc
     3241 ttcgagggca cgaacctgtc ggtgggacgc ggctccgacg cgccgttcga gcaggtgggg
     3301 gccccgtggc tggacacggc cgccgtcctg gccgatctgc gccgggcggc gccccggggg
     3361 gtccgtgcga gcggggtcac gttcacgc
//
LOCUS       DASUYN010000451         2278 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_579125, whole genome shotgun sequence.
ACCESSION   DASUYN010000451 DASUYN010000000
VERSION     DASUYN010000451.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2278)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2278)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2278
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_579125"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..310
                     /locus_tag="VF061_08830"
     CDS             <1..310
                     /locus_tag="VF061_08830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669648.1"
                     /translation="LALYGLLKAMSDNPMVALNHAIATAMVEGPASGLELLKTLDRDP
                     RVAGHYRLDAVRGHLLERAGDREAAMTHYRAAADGTASLPERNYLLTKAARLATDLGH
                     "
     gene            complement(428..640)
                     /locus_tag="VF061_08835"
     CDS             complement(428..640)
                     /locus_tag="VF061_08835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEX6669649.1"
                     /translation="MRTTGTVKWFNDAKGFGFITPESGEKDCFVHHSAISGQGFKSLA
                     EGEKVEFDVVQGAKGPAAENVVKLGK"
     gene            983..1180
                     /locus_tag="VF061_08840"
     CDS             983..1180
                     /locus_tag="VF061_08840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669650.1"
                     /translation="METRLDLPMVPVEPRWEYREVVREPAAGLMSTEELDRLGIEHWE
                     LAGVVAAGDRVHFYFKRERRR"
     gene            1184..1918
                     /locus_tag="VF061_08845"
     CDS             1184..1918
                     /locus_tag="VF061_08845"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEX6669651.1"
                     /translation="MRVGWAVWGALGAAMAGVAALLAGPPLWVLDGLAAGFPGCLYRV
                     RTAEPLVALTFDDGPDEVTTPLILAELRRHGARATFFLIGERVRGREPLMRRLVEEGH
                     EVGNHFMRDRPAILLSAEERDRDLERAHGILARFGEPRWGRPASGWYSAGMVAAMSRR
                     GYQCALGSVYPFDATIPSSRFASWHILRNVRPGAIMVLHDGGARGWRSARTLRTVLPE
                     LRRRGYRVVTLSELVPRPAPIPSVPE"
BASE COUNT          321 a          815 c          773 g          369 t
ORIGIN      
        1 tctggcgttg tatggattgt tgaaggcgat gtccgacaat ccgatggtcg ccctcaacca
       61 tgcgatcgcg acggccatgg tggagggacc ggcctcgggt ctcgagctgc tgaagacgct
      121 ggatcgggac ccgcgggtgg cggggcacta ccgcctcgac gcggtccgcg gccacctgct
      181 ggagcgcgcg ggggaccgcg aggcggcgat gacgcactac cgcgcggcgg cggacgggac
      241 ggccagtctc cccgagcgca actacctcct caccaaggcc gcgcgactcg ccaccgacct
      301 cgggcactga cgacaaaacg cccggccggt gccatgcacc gccgggtcgc cagtcgaagc
      361 agtttttgat cacccaggct gcttcagccc tggggccccg aagggctatg tcgtgtgcgt
      421 cgagctctta cttgccgagc ttgacgacat tctctgcggc cgggcctttg gcgccctgaa
      481 ccacgtcgaa ctccaccttc tcgccctcgg cgaggctctt gaagccctgg cccgagatgg
      541 ccgaatgatg gacgaagcag tccttctcgc cgctctccgg ggtgatgaac ccgaagccct
      601 tggcgtcgtt gaaccacttc acggtaccgg tggtgcgcat gctgagtttt cctttgtgtt
      661 cgtaatcggg actcggcatt cgcacgcgta ccgactacca gttctcgtga tcgttgccct
      721 cacgccgggc cgcgatgctt ccaacgaaaa agggcccctg cgatttcccg ggaccctggt
      781 tccttggatc tatgaatcgc gccttgcggc gcgcacatcg caggcgggag tataaccagg
      841 agggccccgt ggatcaaggg cccccgtccg gggactccag gactagtatt cgaggacccg
      901 ctcaaacccg gagggcacga tgcacccgag cctggaaatc ccccctcgtc ccccatggtc
      961 ccccgtgccg cccggacctc cagtggagac ccgcctcgac cttcccatgg tcccggtgga
     1021 gccgcggtgg gaataccggg aggtggtccg ggagccggct gccggcctca tgagcacgga
     1081 ggagctcgac cggctcggaa ttgagcactg ggagctcgcg ggcgtggtcg cagccggcga
     1141 ccgggtgcac ttctatttca agcgggagcg gcgccgctag tccgtgcgcg tcgggtgggc
     1201 ggtctggggc gcgctcggtg cagcgatggc gggcgtggcg gcgctgctcg ccgggccgcc
     1261 gctctgggtg ctcgatggcc tggccgctgg ctttcccggc tgcctgtacc gcgtccgcac
     1321 ggcggagccg ctggtcgcgc tgacgttcga cgacggccct gacgaggtca ccacgccact
     1381 catcctggcc gagctgaggc ggcacggtgc ccgggccacg ttctttctga tcggcgagcg
     1441 ggtccgcggc cgagagccgc tgatgcggcg cctggtcgag gaaggccacg aggtgggcaa
     1501 ccacttcatg cgcgaccggc ccgcgatcct gctctccgcg gaagagcgcg accgggacct
     1561 ggagcgggcg cacgggatcc tggctcgctt cggcgagccg cgctgggggc gccccgcctc
     1621 ggggtggtac tcggccggca tggtcgcggc gatgtcccgc cggggctacc agtgtgctct
     1681 cggctccgtg taccccttcg acgccaccat cccctcgagc cggttcgcga gctggcacat
     1741 cctcaggaac gtgcgccccg gcgccatcat ggtgctgcac gatggcggcg cgcggggttg
     1801 gcgctcggcg cggaccctgc gcaccgttct ccccgagctc cggcgccggg ggtatagggt
     1861 agtcaccctc agcgagctgg tcccgcgccc cgccccgatt ccttcggtcc cggagtgatc
     1921 cgcacccgct cttgcgcaac ccgggctccc gcctcatcgt ggtagcacgg gcggcggtcc
     1981 acgcccaacc tcgacgaccc tcccccagcg ggggtcctgg tgaggcaaag gggggcatac
     2041 tcccggatcg gcatcgcgag ttcctttgcg tcgccgcgtg cgcgctgctg gggggtgtgc
     2101 ccgtggcctg accagaggaa cccttcgatg ccgaccaaca aggacttcaa gcgcctcgtg
     2161 cgcacccgca tgcgccagac gggcgaggct tataccaccg cccgcgctca cctcctcagc
     2221 agacagcgcc cgcaacaacc cgctcccgcc gcggccgcgc gcccaccggc gagcccca
//
LOCUS       DASUYN010000452         2513 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_579319, whole genome shotgun sequence.
ACCESSION   DASUYN010000452 DASUYN010000000
VERSION     DASUYN010000452.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2513)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2513)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2513
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_579319"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..537)
                     /locus_tag="VF061_08850"
     CDS             complement(<1..537)
                     /locus_tag="VF061_08850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669652.1"
                     /translation="MSRAWGWLGAFALLAGASTACQERLTAPAECPELCPGGEARVLE
                     TVLTPLPGSDSSFPGYVPRHRAGAMLVSNGLPAAEARVVYRFGARVDSISVRDTLRAY
                     AVDSALLSLNLIRRDTLVNGLKLYLYRIDPATADSEATFASVTSQLVPTAIIDSIAVD
                     DTLNSGLVRTVLRGTDLAK"
     gene            complement(534..920)
                     /locus_tag="VF061_08855"
     CDS             complement(534..920)
                     /locus_tag="VF061_08855"
                     /EC_number="3.5.4.5"
                     /inference="COORDINATES: protein motif:HMM:NF004064.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004126 - cytidine deaminase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0009972 - cytidine deamination [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HEX6669653.1"
                     /translation="MTDPLVAAARAAQARAYAPYSNFRVGAALESESGEVYVGCNVEN
                     ASYGLTICAERAAVCAAVTAGARGFRRAVVVSDADPPAAPCGACRQVLSEFGRDFRVD
                     AVGPNRTASWTMAELLPAAFGREQLT"
     gene            complement(913..2079)
                     /locus_tag="VF061_08860"
     CDS             complement(913..2079)
                     /locus_tag="VF061_08860"
                     /EC_number="5.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008973 - phosphopentomutase activity
                     [Evidence IEA];
                     GO_process: GO:0009117 - nucleotide metabolic process
                     [Evidence IEA];
                     GO_process: GO:0043094 - cellular metabolic compound
                     salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopentomutase"
                     /protein_id="HEX6669654.1"
                     /translation="MRRAAIIVLDGVGIGPAPDTETYGDAGSDTLGNVARRSGGLWLP
                     NLAELGLGHCAALAGVPPVPSPNAAHGTCEPVSPGKDSTTGHWEICGLRLERPFPTYP
                     EGFPSSVVDEFARLTGRGVLGNLPASGTAVLDRYGEEHRRTGKWIVYTSADSVFQVAA
                     HEATIPLDELYRACEAARQLLQGEHGVSRVIARPFTGEPGAWVRTPRRKDFSLPPPGP
                     TLLDRLSERHIPRVGVGKVDDLFAGRGIASIHTATNADAYALIEGALLAMERGLLFAN
                     VIEFDQTWGHRNDVPGYVQGLAELDRALPRLLAPVREDDLVIFTADHGNDPTTPSTDH
                     SREMVPLLVTGPRVRPVGLGRRRTMADIGQTVAEFLGVTPLATGTSFLSEVWID"
     gene            complement(2079..>2513)
                     /locus_tag="VF061_08865"
     CDS             complement(2079..>2513)
                     /locus_tag="VF061_08865"
                     /inference="COORDINATES: protein motif:HMM:NF013038.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase C-terminal domain-containing
                     protein"
                     /protein_id="HEX6669655.1"
                     /translation="LYGGEARASGPGPRPVAALRTRVVAVRAIGVGESVSYGGAWIAD
                     RPTTIATLGIGYADGFPRAAGRSPAAPDRMVELRGRAVPLVGRVTMDMCMAAVDDGQV
                     AVGDVATIFGGLVTLDEQARAAGTISYELLTSLGSRLPRRYR"
BASE COUNT          362 a          941 c          880 g          330 t
ORIGIN      
        1 tttcgcgagg tcggttcccc gcaacaccgt gcggaccagg cccgagttga gggtatcgtc
       61 cacggcgatg ctgtcgatga tcgctgtcgg caccagctgt gaggtgacgg aggcgaacgt
      121 cgcttcggaa tccgcggtcg cggggtcgat acggtacaga tagagcttga ggccgttcac
      181 cagcgtgtcg cggcggatca ggttgagcga caggagcgcg gagtccaccg cgtaggcgcg
      241 caaggtgtcc cgcacactga tcgaatcgac cctggccccg aaccggtaga cgacccgcgc
      301 ctccgccgcc ggcagcccgt tcgagaccag catcgcgccg gcgcgatgcc gcggcacgta
      361 gcccgggaag ctcgagtcgg atcccggcag cggcgtgagg acggtttcga gcacccgtgc
      421 ctctccgccc gggcagagct ccgggcactc ggcgggcgcg gtcagccgct cctggcacgc
      481 cgtgctcgcg cccgcgagca gcgcgaacgc acccagccag ccccacgcgc ggctcacgtc
      541 aactgctccc ggccgaaggc cgccggcagc agctcggcca tcgtccagct ggcggtgcgg
      601 ttcggcccga ccgcgtccac cctgaagtcg cggccgaact cggagagcac ctgccggcag
      661 gccccgcagg gcgcggcggg gggatcggcg tcactcacca ccacggcccg ccggaaaccc
      721 cgtgccccgg cggtgaccgc cgcgcacacg gccgcgcgct cggcgcagat ggtgaggccg
      781 taggacgcgt tctccacgtt gcagccgacg tacacctcac cgctctcgct ttccagcgcg
      841 gcgccgaccc ggaaattgga gtacggcgcg taggcccgcg cctgtgcggc acgcgccgcg
      901 gccaccagtg gatcagtcaa tccagacctc ggacaggaat gaggtgccgg tcgccagcgg
      961 cgtcacgccg agaaactcgg cgaccgtctg gccgatatcc gccatcgtgc gacgccgtcc
     1021 cagcccgacc ggccgcacgc gagggcccgt gacgagcagg ggcaccatct cgcgcgagtg
     1081 atcggtggac ggcgtggtcg ggtcgttccc gtgatcggcg gtaaagataa cgaggtcgtc
     1141 ctcccgcacc ggcgcgagca gccggggcag cgcgcggtcg agctcggcga gcccctggac
     1201 gtacccgggc acgtcgttgc ggtgccccca ggtctggtcg aactcgatca cgttggcgaa
     1261 gagcaggccc cgctccatcg ccagcaacgc cccctcgatg agcgcgtacg cgtcggcatt
     1321 cgtggcggtg tggatgctgg cgatgcctcg tcccgcgaag aggtcgtcta ccttgcccac
     1381 gcccactcgc gggatgtgtc gctcggacag ccggtcgagc agtgtggggc ccggtggcgg
     1441 caggctgaag tccttgcgcc gcggggtgcg gacccaggcg cccggctcgc ccgtgaacgg
     1501 ccgggcgatc acgcgggaga cgccatgctc cccctgaagc agctgccgcg ccgcctcgca
     1561 ggcccggtac agctcgtcca gcgggatcgt cgcctcgtgc gccgcaacct ggaagacgct
     1621 gtccgccgag gtgtagacga tccactttcc cgtgcgccgg tgctcctcgc cgtagcggtc
     1681 gaggaccgcg gtacccgagg cggggagatt gcccagcacc cctctgcccg tgagccgggc
     1741 gaactcgtcc accaccgagc tcgggaaccc ctcgggatag gtcgggaacg gccgttccag
     1801 tctcagcccg cagatctccc agtggcccgt ggtgctgtcc ttgcccgggc tcaccggctc
     1861 acaggttccg tgggcggcgt tgggcgacgg caccggcggc acgcccgcga gggcggcgca
     1921 gtggcccagc cccagctcgg ccaggttcgg cagccagagt ccacccgagc gccgcgcgac
     1981 gttgcccagg gtatcgctcc cggcatcgcc gtaggtctcg gtgtccggcg ccggcccgat
     2041 gccgacgccg tccagcacga tgatggccgc tcgccgcatc agcggtagcg cctcggcagg
     2101 cgcgacccga gcgaggtcag cagctcgtag gagatggtcc ccgcggccct cgcctgctcg
     2161 tccagcgtca ccagcccccc gaagatcgtc gccacgtcac ccaccgcgac ctgcccgtcg
     2221 tccaccgcag ccatgcacat gtccatggtg accctgccga ccagggggac ggcgcgtccg
     2281 cgcagctcga ccatccgatc gggcgccgca gggctccggc cggccgcgcg cgggaagccg
     2341 tccgcgtagc cgataccgag cgtcgcgatc gtcgtgggcc ggtcggcgat ccaggcgccg
     2401 ccgtagctga cgctctcgcc gacaccgatc gcacgcaccg cgacgacccg ggtccggagc
     2461 gcggccaccg ggcgcggccc cggccccgag gcacgggcct cgccgccgta gag
//
LOCUS       DASUYN010000453         3934 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_580127, whole genome shotgun sequence.
ACCESSION   DASUYN010000453 DASUYN010000000
VERSION     DASUYN010000453.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3934)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3934)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3934
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_580127"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..197)
                     /locus_tag="VF061_08870"
     CDS             complement(<1..197)
                     /locus_tag="VF061_08870"
                     /inference="COORDINATES: protein motif:HMM:NF012407.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /protein_id="HEX6669656.1"
                     /translation="MKRYTLAVLPGDGIGPEVTAEAIKVLRAAADLFGYRIDTGEYAV
                     GAAGVAESGDALPERTRAAVV"
     gene            complement(194..784)
                     /gene="leuD"
                     /locus_tag="VF061_08875"
     CDS             complement(194..784)
                     /gene="leuD"
                     /locus_tag="VF061_08875"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: protein motif:HMM:NF002458.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HEX6669657.1"
                     /translation="MESFVVHTGRVAALPRANVDTDQVIPKQFLKRVERTGFGPALFF
                     DWRYRPDGSPDPAFELNAPQAQGATVLLAGENFGCGSSREHAPWALAQYGFRAILAPS
                     FADIFHGNCCQNGLLPVTLAGPAVQELFRRCAAAPEGYELTVDLLTTTVRDARGFEAS
                     FDIPAYRREMLLHGLDEIGRTLQHEAAIAAFERARS"
     gene            complement(864..2297)
                     /gene="leuC"
                     /locus_tag="VF061_08880"
     CDS             complement(864..2297)
                     /gene="leuC"
                     /locus_tag="VF061_08880"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: protein motif:HMM:NF009116.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HEX6669658.1"
                     /translation="MRTLFDKVWDAHVVHQTEGGPALLYVDLHLVHEVTSPQAFEGLR
                     LAGRRVRRPDLTVATVDHNVPTGDRRLPIADEIAAIQLSTLVRNAREAGIELHDLDSP
                     DQGIVHVIGPELGLTRPGSLIVCGDSHTSTHGAFGALAFGIGTSEVEHVLATQCIVQA
                     RPRTMEVRFLGRPSLGVGAKDLVLALIRRIGTAGGTGYVLEYTGEAIRTLGMEGRMTI
                     CNMSIEAGARAGMIAPDATTFAFLESRPRSPKDAAWSRAVDAWGRLRSEPGALYDRTV
                     VIDAAALGPQVTWGTSPGMTAEITERVPDPADAPSEAERQSFRRALEYMALEPGTPLE
                     GLPVDRVFLGSCTNGRLGDLREAAGVVRGRRVAKGVRAMVVPGSQRVKAAAEAEGLDR
                     IFRAAGFEWRNPGCSMCLGMNEDILAPGERCASTSNRNFEGRQGRGGRTHLMSPAMAA
                     AAAIEGCLVDVRELVREDIEVFSSTLS"
     gene            complement(2297..3379)
                     /gene="ilvC"
                     /locus_tag="VF061_08885"
     CDS             complement(2297..3379)
                     /gene="ilvC"
                     /locus_tag="VF061_08885"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: protein motif:HMM:NF004017.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HEX6669659.1"
                     /translation="MSESVRVYYDADTDRSRLNGRTFAIVGYGSQGHAHALNLRDSGA
                     RVIVGLRAGSASAERAKAAGLDVRPVAAAAAAADTVMMLVPDQDARSVYERDVLPGLG
                     PGKTLMFAHGFNVHYGEVKPPAGVDVSLVAPKSPGHLVRSEYEAGRGVPGLVAVHQDA
                     SGGALADALAYAAGIGCTRAGVIETSFREETETDLFGEQAVLCGGVTALVKAGFETLT
                     AAGYRPEMAYFECLHELKLIVDLMYRGGLQFMRHSISDTAEYGDYTRGPRLITEETRA
                     EMRRILDEIQDGSFAREWLDENRAGRPNFERLRQEDREHLIEQVGKQLRAMMPWAEEG
                     KSAAAAADAPKEPPRRRPAAPASATR"
     gene            complement(3376..>3934)
                     /gene="ilvN"
                     /locus_tag="VF061_08890"
     CDS             complement(3376..>3934)
                     /gene="ilvN"
                     /locus_tag="VF061_08890"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: protein motif:HMM:NF008864.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1990610 - acetolactate synthase regulator
                     activity [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HEX6669660.1"
                     /translation="AAGPAARAGMSVTQAVVVLLEDRLITLNRVVGLFRRRNFPARSL
                     SVGPTGTPGISRLTMMMQSDHAAAERAVQHLQKIVGVHDATVVPQGDAIARELALVKL
                     RPSPEQYAELLDVVQLYRATLVDESADAVVVELTGSEAFVLSCLRALERFEIVDVARS
                     GAVAMESGAADPRLGAHPQLEAGAR"
BASE COUNT          565 a         1446 c         1370 g          553 t
ORIGIN      
        1 tcgaccaccg cggcccgggt gcgctcgggg agagcgtcgc ccgactcggc gacgccggcg
       61 gcgccgaccg cgtactcgcc ggtgtcgatc cgatacccga acaggtccgc cgcggcgcgc
      121 agcaccttga tcgcctctgc cgtgacctcc ggaccgatgc cgtcgccggg caggacggcg
      181 agtgtgtagc gcttcacgag cgggcccgct cgaacgccgc gatcgcggcc tcgtgctgca
      241 gcgtgcgccc gatctcgtcc agaccgtgga gcagcatctc ccggcggtag gcgggaatgt
      301 cgaacgaggc ctcgaagccg cgcgcgtcgc gcacggtcgt ggtgagcaga tccaccgtga
      361 gctcgtaacc ctccggcgcc gccgcgcagc ggcggaagag ctcctgcacc gcgggcccgg
      421 ccagcgtcac cgggagcaga ccgttctgac agcagttgcc gtggaagatg tccgcgaatg
      481 agggcgcgag gatcgcgcgg aagccgtact gcgccagcgc ccagggcgcg tgctcgcggg
      541 aggagccgca gccgaagttc tccccggcga gcagcaccgt ggcgccctgc gcctgcggcg
      601 cgttgagctc gaacgccggg tccggcgaac catcgggccg atagcgccag tcgaagaaga
      661 gggcgggccc gaaacccgtc cgctcgacgc gcttcaggaa ttgcttgggg atgacctggt
      721 cggtatccac gttggcgcgg gggagcgccg cgacgcggcc ggtgtgtact acgaacgatt
      781 ccatcgcccc tcgcaggtca gcccgaagcc gaggtgtcaa tctactttag atctcaaaca
      841 gtaaattacc tactaccaac tgtttagctt aacgtacttg agaagacttc tatgtcctcc
      901 cgcaccagct cccgcacatc caccaggcac ccctcgatcg ccgccgccgc cgccatggcc
      961 gggctcatga ggtgagtccg tccgccccgc ccctgccgtc cctcgaagtt ccggttcgac
     1021 gtcgatgcgc agcgctcgcc cggagcgagg atgtcctcat tcatgccgag acacatcgag
     1081 catcccggat tgcgccactc gaacccagcc gcacggaaga tccgatcgag cccttccgcc
     1141 tccgccgccg ccttcacccg ctgggaacca ggcaccacca tcgcgcggac gcccttggcc
     1201 actcggcgtc cccgcacgac gcccgcggct tcgcgcaggt cgccgagccg cccattggtg
     1261 cacgagccga ggaagacgcg atccaccggc aagccctcga gcggtgtgcc gggctcgagc
     1321 gccatgtact cgagcgcgcg gcggaacgat tgccgctccg cctccgacgg cgcgtcggcg
     1381 ggatcgggca cccgctcggt gatctccgcg gtcatgcccg gactcgttcc ccaggtgacc
     1441 tgggggccga gcgcggcggc gtcgatcacc acggtgcgat cgtacagcgc gcccggctcg
     1501 ctccggagtc ggccccacgc gtccaccgcg cggctccacg ccgcgtcctt cggcgagcgc
     1561 ggccgcgact cgaggaaggc gaacgtggtc gcgtcgggcg cgatcatccc ggcgcgcgcg
     1621 ccggcctcga tggacatatt gcagatggtc atccgaccct ccatcccgag ggtgcggatc
     1681 gcctcgccgg tgtactccag cacgtaaccc gtgccaccgg cggtgccgat gcggcggatg
     1741 agcgcgagga cgagatcctt ggcgcccacc ccgaggctcg gccggccgag gaagcgcacc
     1801 tccatcgtgc ggggccgcgc ctgcacgatg cactgggtcg ccagcacgtg ctccacctcg
     1861 ctggtcccga tcccgaacgc cagcgcgccg aacgccccgt gggtggaggt gtgcgagtcg
     1921 ccgcagacga tcagcgaccc gggccgggtc aggccgagct cgggaccgat cacgtgcacg
     1981 atgccctggt cgggggaatc gaggtcgtgc agctcgatgc cggcctcgcg cgcgttgcgc
     2041 accagggtgg agagctggat cgccgcgatc tcgtcggcga tcgggagccg gcggtcgccg
     2101 gtcgggacgt tgtggtccac cgtcgcgacc gtcaggtcgg gccgccgcac ccggcgcccc
     2161 gccaggcgga gcccctcgaa ggcctggggc gaggtgacct cgtggaccag gtgcaggtcc
     2221 acgtagagca gcgccggccc gccctcggtc tggtgaacga cgtgggcgtc ccagaccttg
     2281 tcgaacagcg tccgcatcac cgggtggcgc tggctggcgc ggccggacgg cgccggggcg
     2341 gctccttcgg ggcgtccgcc gcggccgccg cgctcttccc ttcctccgcc cacggcatca
     2401 tggcgcggag ttgcttcccc acctgctcga tgagatgctc gcggtcctcc tgccggagac
     2461 gctcgaagtt gggccggccg gcgcgattct cgtccagcca ctcccgggcg aacgagccgt
     2521 cctggatctc gtccaggatg cggcgcatct cggcccgcgt ctcctcggtg atgagacggg
     2581 gacctcgggt gtagtcgccg tactccgccg tgtcgctgat ggagtggcgc atgaactgca
     2641 ggccgccgcg gtacatcagg tccacgatca gcttgagctc gtggagacac tcgaagtacg
     2701 ccatctcggg ccggtagccc gccgcggtga gggtctcgaa gcccgccttc accagggccg
     2761 tgacgccgcc gcagagcacc gcctgctcgc cgaacaggtc ggtctccgtc tcctcgcgga
     2821 aggaggtctc gatgaccccg gcgcgggtgc agccgatgcc cgcggcatac gccagggcgt
     2881 ccgccagcgc gccgccggac gcgtcctgat ggaccgcgac cagcccgggg acgccgcggc
     2941 ccgcctcgta ctcgctccgc accaggtggc ccggcgactt gggggccacc agagacacgt
     3001 ccacgcccgc cggcggcttg acctcgccgt agtgcacgtt gaacccatgg gcgaacatca
     3061 gcgtcttgcc cgggccgagg ccggggagga cgtcgcgctc gtagaccgag cgcgcgtcct
     3121 ggtccggcac cagcatcatg accgtgtccg cggcggcggc cgcggccgcc accggccgga
     3181 cgtccaggcc cgccgccttc gcccgctccg ccgaggcgct gccggcgcgg aggccgacga
     3241 tgacccgggc gccgctgtcg cgcaggttga gcgcgtgggc gtgaccctgg ctgccgtagc
     3301 cgacgatggc gaaggtgcgc ccgttcagcc ggctcctgtc ggtatcggcg tcgtagtaga
     3361 cccgcacgga ttcgctcatc tcgctcccgc ttccagttga gggtgggcgc cgaggcgggg
     3421 gtccgccgcg ccggactcca tggccacggc cccgctgcgc gcgacgtcga cgatctcgaa
     3481 gcgctcgagc gcacgcaggc aggagagcac gaacgcctcc gagccggtga gctcgaccac
     3541 gaccgcgtcg gcggactcgt ccaccagcgt cgcacgatag agctgcacca cgtccagcag
     3601 ctcggcgtac tgctcgggcg acggccggag cttgaccagc gccagctcgc gggcgatcgc
     3661 gtcgccctgc gggacgaccg tcgcgtcgtg tacgccgacg atcttctgga ggtgctggac
     3721 ggctcgctcc gccgcagcgt ggtcggactg catcatcatc gtgagcctcg agatgcccgg
     3781 cgtgccggtc ggaccgaccg acaggctgcg cgcggggaag ttccgccgcc ggaagagccc
     3841 gacgacgcga ttcaaggtga tcaggcgatc ctcgaggagg accacgacgg cctgcgtcac
     3901 gctcatgccg gcacgagccg cggggccggc ggct
//
LOCUS       DASUYN010000454         2323 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_580246, whole genome shotgun sequence.
ACCESSION   DASUYN010000454 DASUYN010000000
VERSION     DASUYN010000454.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2323)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2323)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2323
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_580246"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(88..537)
                     /locus_tag="VF061_08895"
     CDS             complement(88..537)
                     /locus_tag="VF061_08895"
                     /inference="COORDINATES: protein motif:HMM:NF014448.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HEX6669661.1"
                     /translation="MAFLSAAPLELAELVARVEAPERGAVASFLGLVRDHHRGRAVHR
                     LEYSAYAPMAEAECARIVAEAEERWPVRIVLAHRIGALEIGDAAVAIAAGAAHRDEAF
                     AACRFVIEEVKRRVPIWKKEFYADGAVEWVGAGGALVGDFPAGSSSP"
     gene            complement(541..807)
                     /locus_tag="VF061_08900"
     CDS             complement(541..807)
                     /locus_tag="VF061_08900"
                     /inference="COORDINATES: protein motif:HMM:NF014636.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HEX6669662.1"
                     /translation="MPAPTTQIVNVRILLFASYAERLGLETVRVALPALATVADALHH
                     VRSLPGGDQIPPHPLCAVNLSHAPLETRLAEGDEVALLPPLAGG"
     gene            complement(915..1244)
                     /locus_tag="VF061_08905"
     CDS             complement(915..1244)
                     /locus_tag="VF061_08905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEX6669663.1"
                     /translation="MTKADLVEQVTASIARTAGPMISKKDCARVVDAFLEAVKEALRQ
                     QHNIEVRGFGTFKIRRRKTRMARNPRTGDPVEVAARPVPVFKPSKELRALVADEGEPA
                     GETAQGM"
     gene            complement(1322..>2323)
                     /gene="carA"
                     /locus_tag="VF061_08910"
     CDS             complement(1322..>2323)
                     /gene="carA"
                     /locus_tag="VF061_08910"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: protein motif:HMM:NF009475.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005951 - carbamoyl-phosphate synthase
                     complex [Evidence IEA];
                     GO_function: GO:0004088 - carbamoyl-phosphate synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HEX6669664.1"
                     /translation="TGYQETFTDPSYLGQIVVMTAPMIGNYGINQEDMESERPQVSGV
                     VVRELSREPSNWRATLSLDDWLAASKVPVIEGVDTRRLTRHLRERGAMRGVIAEGQGP
                     TPPVTSRLQASPSMTGLDLASRATVRDRRVEGQGPHVVAYDYGMKRNIVRMLVQAGCR
                     VTVVPADTSPAQVRELQPDGLFLSNGPGDPAAVGYAIENIRDLAGAGLPTFGICLGHQ
                     LIGLAFGGETAKLPYGHRGGNHPVRDLRTGQVLITTQNHGFAVVGDAGGVPGASGLEV
                     THLNLNDGTIEGVRHRELPLFAVQYHPEAAPGPHDAFPHFEEFLSSLPQPGSPKPSS"
BASE COUNT          357 a          809 c          809 g          348 t
ORIGIN      
        1 ggagattgca gcggtcggtg acggagatgc ggaggttgcg cagcggccga ccgaagcggt
       61 cggccggcgc cgtcggcagc ggagcgatca tgggctcgag ctccccgccg ggaagtcgcc
      121 gacgagcgcg cctcccgccc cgacccactc gacggccccg tcggcgtaga actccttctt
      181 ccagatcggc acccggcgct tcacctcctc gatcacgaag cggcacgcgg cgaacgcctc
      241 gtcgcgatgg gcggccccgg cggcgatggc caccgccgca tccccgatct ccagcgcacc
      301 gatccggtgc gccagtacga tcctgaccgg ccaacgctcc tcggcctcgg ccacgatccg
      361 ggcgcactcc gcttccgcca tcggggcgta ggccgagtac tccaggcggt ggaccgcgcg
      421 ccccctgtgg tggtcgcgca cgaggcccag aaacgaggcc acggcgcccc gctcgggcgc
      481 ctcgactcgc gcgaccagct cagcgagctc gagcggagca gcggagagaa aggccatcgc
      541 tcagcccccc gccaacggcg gcagcagcgc gacctcatcg ccttcggcga ggcgcgtttc
      601 cagcggcgcg tgcgacagat tcacggcgca gagcgggtgc ggcgggatct ggtctcctcc
      661 cggcagcgac cggacgtggt gcagtgcatc ggccaccgtg gccagtgccg gaagggcgac
      721 gcgcacggtc tccagcccga gacgctcggc gtagctggcg aagaggagga tgcggacatt
      781 gacgatctgc gtcgtgggag cgggcatgac tggaagctat ccgcggcgga acgagggcga
      841 aacggccagc cggacaagaa gaggggccgc ccggatccca tccggcgcgg ccccgacgct
      901 cccggcgaac caggttacat gccctgggca gtctcccctg cgggctcacc ctcatccgca
      961 accagcgccc gtaactcctt gctgggcttg aacacgggga ccggccgcgc agcgacctcg
     1021 accgggtcgc cggtgcgagg gttccgggcc atccgggtct tgcggcggcg aatcttgaag
     1081 gtcccgaacc cgcgcacttc gatgttgtgc tgctgccgga gcgcctcctt gacggcttcg
     1141 aggaaggcgt ccaccacgcg agcgcaatcc ttcttcgaga tcataggccc ggcggtccgg
     1201 gcgatcgacg cggttacctg ttcgacgaga tcggccttgg tcatgcgtcc cccagaaggg
     1261 ttacagacag cgtggctcgg gagggcatcc tggccgatag tatgggctta agtgttgtct
     1321 gtcaagagct tggcttcgga gaccccggct gcggaaggga tgagaggaac tcctcgaagt
     1381 gcgggaaggc gtcgtgcggc ccgggcgcgg cttccgggtg atactggacg gcgaagagcg
     1441 gaagctcgcg gtggcgcact ccctcgatgg tgccgtcgtt gaggttcagg tgggtcacct
     1501 cgagcccgct tgcccccggc accccaccgg cgtcgccaac caccgcgaag ccatggtttt
     1561 gcgtggtgat gaggacctgt cccgtccgga gatcgcgcac cgggtggttg ccgccgcgat
     1621 gcccgtaggg cagcttcgcc gtctcacctc cgaacgcgag cccgatgagt tgatgtccca
     1681 ggcagatacc gaacgtcggc agtcccgccc cggcgaggtc gcggatgttc tcgatggcgt
     1741 agccgacggc ggcgggatca ccgggcccgt tggagaggaa caggccatcg ggctggagct
     1801 cgcgcacctg cgccgggctg gtgtccgccg ggacgaccgt gacccggcag cccgcctgca
     1861 ccagcattcg cacgatgttg cgcttcatcc cgtagtcgta ggcaaccacg tgcgggccct
     1921 gaccttccac ccgtcggtcc cgcacggtgg cgcgggaagc gagatccaat ccggtcatgg
     1981 agggcgacgc ctgcaggcgg gaggtcaccg gcggagtcgg accctgccct tcggcgatta
     2041 ccccgcgcat cgcgccgcgt tcgcgcaggt gccgggtgag ccggcgggta tccactccct
     2101 cgatcaccgg caccttcgag gccgccagcc agtcgtccag gctgagcgtg gcgcgccagt
     2161 tggacggctc ccgcgagagc tcgcgcacga ccaccccgct gacctggggt cgctccgact
     2221 ccatgtcctc ctgattgatc ccgtagttcc cgatcatggg cgccgtcatg accacgatct
     2281 ggccgaggta gctcggatcg gtgaacgtct cctggtagcc ggt
//
LOCUS       DASUYN010000455         3633 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_361827, whole genome shotgun sequence.
ACCESSION   DASUYN010000455 DASUYN010000000
VERSION     DASUYN010000455.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3633)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3633)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3633
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_361827"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..368)
                     /locus_tag="VF061_08915"
     CDS             complement(<1..368)
                     /locus_tag="VF061_08915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669665.1"
                     /translation="MALLLLVGPLQAQEERRVEAPTDLHRDPDGTPLVSLPAGAPVEA
                     GQADGDWRKVTVEGWIYRPSTSPTRRDGFDLIVSSEEGENLRGAPNGPIVGRAREGTL
                     LERVGERGKWFRVRRDGWVPR"
     gene            480..2003
                     /gene="gpmI"
                     /locus_tag="VF061_08920"
     CDS             480..2003
                     /gene="gpmI"
                     /locus_tag="VF061_08920"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046537 -
                     2,3-bisphosphoglycerate-independent phosphoglycerate
                     mutase activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HEX6669666.1"
                     /translation="MVLVVLDGWGYRRDREGNAIELASTPVWHRLWESFPRTLLEASG
                     LAVGLPEGQMGNSEVGHLNIGAGRVVPQDLVRISQSIQSGEFYQLPPLVELCARLRET
                     GGTLHLVGLLGPGGVHALDRHLLACVELGVRQRVPAIAIHGFLDGRDSPPTLGAEVVR
                     TLLQDMRRIAGARVEVASLTGRYYGMDRDRRWDRTKLAYDAMVHGIGTAVEHPVLAVQ
                     AAYQRGETDEFIRPLVHHRKGQPVALMQDGDGVLFFNYRSDRMRQMVSALALDGFEEF
                     DLGVRPRLSAVTMTQYDQTFPIPQAFPPFSLARILAEVLADQGRTQFRTAETEKYPHV
                     TYFFNGGHEPPYPGEERRLVPSQRVATYDLAPEMSAHGITDVLCRTIDSADHDFLLCN
                     YANADMVGHTGVLPAVIKAVETVDGCLARVLASADRAGCSVLVTADHGNCEMMIDPLT
                     GGVHTAHTTNPVPFVAVGTQAASLRAGGSLRDVAPTVLRLLGIESPADMTGRDLREC"
     gene            2003..2737
                     /locus_tag="VF061_08925"
     CDS             2003..2737
                     /locus_tag="VF061_08925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669667.1"
                     /translation="MRRADGMESDLGMTVPVAILLLIFLVPAGLHAQVGHPPGRSPYR
                     DIPKGHAITPYGALFGGTGGRFAIAPHDGTVFGVRYDIRTGSALQMGLLFGRGDLERR
                     IVDPFVAVAERVSGPVDQTVSFVEADLQLNLTGGKTWNRLAPFVAAGVGLTLPSETAA
                     DTSGFELGRKIYFAPHAGFRFFLTDRIHLRTDARVVFWKLSYPASFTREPPAESGAPP
                     VIDDGNVSEWSTSSWLQAGLGFSFSP"
     gene            2740..3156
                     /locus_tag="VF061_08930"
     CDS             2740..3156
                     /locus_tag="VF061_08930"
                     /inference="COORDINATES: protein motif:HMM:NF013411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase"
                     /protein_id="HEX6669668.1"
                     /translation="MAVTLTRTVGFRAVHRLHRPDWSEARNRETFGPLSEPPGHAHDY
                     RCAVTVAGPIAPPMAMVLDLAELDRILQEEVVARLDGKHLNREVPSLEGTIPTCEALA
                     LDVFRRLLPRLPGGVTLERVRIMEDPTLYADCTGLD"
     gene            3131..>3633
                     /locus_tag="VF061_08935"
     CDS             3131..>3633
                     /locus_tag="VF061_08935"
                     /inference="COORDINATES: protein motif:HMM:NF014671.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HEX6669669.1"
                     /translation="MPTAPDSTEPLRPPKRGGRMSGLAAVEETAVWLEVNGRPAVTWM
                     CTPELLEELAVGWLHGEGYIDRLEEVQLRPCATDLGFWAQVPPERVAVVEAEGRRPVL
                     ASGCGAVSTFLAEPTTVEGSPLRGLPPQPERLRALFKALFARGERYRDTGGIHAAALV
                     AESDPPA"
BASE COUNT          524 a         1274 c         1285 g          550 t
ORIGIN      
        1 cgcggcaccc agccgtcccg ccggacccgg aaccacttgc cccgctcccc cacccgctcc
       61 agcagggtcc cctctcgggc acgacccacg atcgggccgt tgggtgcccc ccgaagattc
      121 tcgccctctt cggaggagac gatcaggtcg aagccgtccc gcctggtggg ggaggtggag
      181 ggccggtaga tccacccctc gaccgtcacc ttgcgccagt cgccgtcggc ctgtcccgct
      241 tcgaccgggg cgccggcggg cagggaaacg agcggggtgc catcagggtc gcggtggagg
      301 tcggtgggtg cctcgacccg ccgctcctcc tgcgcctgga ggggtccgac gaggagcagc
      361 agggccacca cgcaggctgg tagccggctc gggccgggac tagattgcgg cgcgtaactc
      421 acagtccgcc attgtagaac acgcggagat ccatgtcaaa cggacgtccc cggaaccggg
      481 tggtcctcgt ggttctggac ggctgggggt atcggcgcga ccgcgaaggg aatgccatcg
      541 agctggcctc gactccggtc tggcaccggc tctgggagag ctttccgcgc accctgctcg
      601 aggcgagcgg gctggcggtg ggtctccccg aagggcaaat ggggaacagc gaggtcgggc
      661 atctcaacat cggcgccggt cgggtggtcc cccaggatct ggtccgcatc tcccagagca
      721 tccagtccgg tgaattctat cagcttcccc cgctggtcga gctctgcgcc cggctgcggg
      781 agaccggggg caccctccac ctggtggggt tgctgggccc cggcggcgtg cacgccctcg
      841 accgccacct cctcgcctgc gtggagctcg gcgtgcgcca gcgggtgccg gccatcgcca
      901 ttcacggctt cctggacggc cgggactcgc ctccgacctt gggggcggag gtcgtccgga
      961 cgctgctcca ggacatgcgc cggatcgccg gagcgcgggt ggaggtggcc tcgctcaccg
     1021 gccggtatta cggcatggat cgcgaccgcc ggtgggaccg caccaagctg gcatacgacg
     1081 cgatggtcca cggcatcggg acggcggtgg agcacccggt gctggcggtt caggccgcct
     1141 accagcgggg cgagacggac gagttcatcc gtccgctggt gcaccaccgg aaggggcagc
     1201 ccgtcgcgtt gatgcaggac ggcgacggcg tgctcttctt caattaccgc agcgaccgga
     1261 tgcgtcagat ggtgagcgcg ctggcgctcg acggcttcga ggagttcgat ctcggggtcc
     1321 gtccccggct ctccgcggtc acgatgaccc agtacgacca gacctttccc atcccccagg
     1381 ccttcccgcc cttcagcctc gcccggatcc tggcggaggt gctcgcggac cagggccgca
     1441 cccagttccg gaccgcggag accgagaagt acccccacgt cacctacttc ttcaacggcg
     1501 ggcacgagcc gccctatccg ggcgaggagc ggcgcctggt gccctcgcag cgggtggcga
     1561 cctacgatct cgcccccgag atgagcgccc acggcatcac cgacgtactc tgccggacca
     1621 tcgactcggc cgaccacgac ttcctgctct gcaactacgc caacgccgac atggtgggcc
     1681 ataccggcgt gttgccggcc gtgatcaagg cggtggagac ggtggacgga tgcctggcaa
     1741 gggtcctggc cagcgcggac cgggccgggt gcagcgtcct ggtgacggcg gatcacggca
     1801 actgcgagat gatgatcgac cccctgacgg ggggagtcca caccgcgcac acaaccaacc
     1861 cggtgccgtt cgtggcggtg gggacgcagg ccgccagctt gcgtgcggga ggctcgctcc
     1921 gggacgtggc accgacggtg ttgcggctgc tcgggatcga gtcgccggcg gacatgaccg
     1981 gacgggacct gagggagtgc tgatgcggcg tgctgatggc atggagagtg acctgggcat
     2041 gacggtcccg gtcgccattc ttctcctgat attcctggtc cccgcgggcc tccacgccca
     2101 ggtcggccac ccgcccgggc ggtcgcccta ccgcgacatt cccaagggcc acgcgatcac
     2161 accgtatgga gcgctgttcg gcggtaccgg agggcggttc gcgatcgcac ctcacgacgg
     2221 gacggtgttc ggcgtccgct acgacatccg caccggcagt gcgctccaga tggggctgct
     2281 cttcggccgg ggggacctgg agcggaggat cgtggatccg ttcgtggcgg tcgcggagcg
     2341 ggtcagcggg ccggtggacc agaccgtctc cttcgtcgaa gccgacctcc agctcaatct
     2401 caccggcggc aagacctgga accggctggc tcccttcgtc gccgccggag tgggactcac
     2461 cctccccagc gagaccgccg cagacaccag cggcttcgag ctcggaagga agatctattt
     2521 cgccccgcac gcgggattcc ggttcttcct caccgaccgc atccaccttc gcaccgacgc
     2581 ccgggtcgtc ttctggaagc tgagctatcc ggcgagcttc acccgggagc cgccggccga
     2641 gtcgggggca ccaccggtca tcgacgacgg gaacgtgagc gagtggagca cctcctcctg
     2701 gctgcaagcc ggtctgggct tctccttctc cccgtagcca tggcggtcac tctcacccgg
     2761 acggtcggct ttcgggccgt gcaccgcctc caccggccgg actggagcga ggccaggaac
     2821 cgggagacat tcggaccgct gagcgagccg cccgggcacg cgcacgacta ccgctgcgcg
     2881 gtgacggtgg ccgggccgat cgcgccgccg atggccatgg tcctcgacct ggccgagctc
     2941 gaccgtatcc ttcaggagga ggtggtcgcc cggctcgatg ggaagcacct caaccgagag
     3001 gtgccgagtc tcgagggcac gatccccacc tgcgaggcgc tcgcgctgga cgtcttccga
     3061 cgcctcctac cgcgccttcc cggaggcgtg acgctggagc gcgtacggat catggaggac
     3121 ccgacgctgt atgccgactg caccggactc gactgagccg ctccggccgc ccaagcgggg
     3181 aggccggatg tcggggctgg cggcggtcga ggagaccgcc gtctggctgg aggtgaacgg
     3241 ccggccggcc gtgacctgga tgtgcacgcc cgagctgctg gaggagctcg cggtgggctg
     3301 gctgcacggc gagggctaca tcgaccggct ggaggaggtc cagcttcgcc cttgcgccac
     3361 cgatctgggg ttctgggccc aggtgccgcc cgagcgcgtg gccgtcgtcg aggcggaagg
     3421 ccgccgacct gtgttggcat cgggctgcgg ggccgtctcc acgtttctag cggaaccgac
     3481 cacggtcgaa ggcagcccgc tgcgggggct cccgccgcag cccgagcggc tgcgcgccct
     3541 cttcaaggcc cttttcgcac gcggcgagcg ctatcgggac acgggcggca tccacgccgc
     3601 cgcgctggtt gcggagagcg acccgcctgc cga
//
LOCUS       DASUYN010000456         4758 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_799378, whole genome shotgun sequence.
ACCESSION   DASUYN010000456 DASUYN010000000
VERSION     DASUYN010000456.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4758)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4758)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4758
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_799378"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..567)
                     /locus_tag="VF061_08940"
     CDS             complement(<1..567)
                     /locus_tag="VF061_08940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669670.1"
                     /translation="MITVNLRPDLKRKRARSPFRGVMEGVRGLGGKVKDPLLLASAAC
                     WVGVLGWLGYVVVGTTHELNALEPQLEATRSEHKRFKAFLAEKRHQETIRDSLVAQIG
                     VIRTVDGDRYVWAHVLDEVTKALPAYTWLVDLAKAAPATPVQPVQPQPPARGAKKAAA
                     DSAAAQAVPVNLPVSFLVNGRTIDIQAYT"
     gene            complement(592..1635)
                     /gene="pilM"
                     /locus_tag="VF061_08945"
     CDS             complement(592..1635)
                     /gene="pilM"
                     /locus_tag="VF061_08945"
                     /inference="COORDINATES: protein motif:HMM:TIGR01175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009297 - pilus assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus assembly protein PilM"
                     /protein_id="HEX6669671.1"
                     /translation="MGLFGRSATTVGLDIGSGLIKLVVISHASGGPVLTKVAFTSVVN
                     DAIVEGEVMDPGIVADAIKDLMASAGIKAKKVVTAVGGRDVIIKKISMDRMKEAEARE
                     VIRWEAEQHVPFDMDNVELDFQILDPEGEGLQMTVLLVAAKRELVEHKVALLSEIGLD
                     ASVIDVDAFALHNAFEINYPEAMVGVVGLVNIGHETTNINILDDGIPVLTRDIPIGTR
                     RFKEDLQRERGLSADEADALLRGASSSDALDPLLEGRGEELAVGIERATAFLQSSSRS
                     AGGISRIFTTGGGARIPRLNKVLSDRLRIPVQLANPIEKLQVADGVFDRMPVDEVAPL
                     LMLPIGLALRSAA"
     gene            complement(1877..2305)
                     /locus_tag="VF061_08950"
     CDS             complement(1877..2305)
                     /locus_tag="VF061_08950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669672.1"
                     /translation="MALPLALLALVVMAAIVAGGFAGAFLEQRVGRNTLYAVQAAGAA
                     EAGAVAVVDEWEGLGLDRLAPGDSATLRPAPLPGSAGYVPIVTRLNGQLFLVRVTGVR
                     TDAAGGTLARRDVALLVRVADSAVPGVPPVWPLRHRAWSW"
     gene            complement(2323..3234)
                     /locus_tag="VF061_08955"
     CDS             complement(2323..3234)
                     /locus_tag="VF061_08955"
                     /inference="COORDINATES: protein motif:HMM:TIGR02532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEX6669673.1"
                     /translation="MSARRGFTLVELVVAMALGLMVGGLVHRVLLHGQRLARAQAEWA
                     ALNENVRTAALVLAGELGEIGYDEITPEAAVALGSPAAVRSDLFAIEPGAVTYLAARG
                     GGRVCRAASSPQPEIVIEASTWESPRAPRATDSLLVFAEGNPATGSDDAWIHLGVVSA
                     GQGICPGGETGIALVVAAPAPLDPAALDLVTPGSPVRLTEVMQMRYYRAGGKSWFGMR
                     SVSTGEAVTPVAGPLADSGAGVRGLTLVYRDAADGSTSDAAAVRAIEIALVGVTEYPI
                     HRRDPRRPLVDSLVLTTRVAPRNGLRP"
     gene            complement(3231..3611)
                     /locus_tag="VF061_08960"
     CDS             complement(3231..3611)
                     /locus_tag="VF061_08960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669674.1"
                     /translation="MRVAGRSAFTIVEAVVALVVLSVGVLALLGSAALTSRMLGQGRH
                     STRAGQVAFARIERLRQIAFSTVPACTSAEWRSGNAAGGGLTESWQIGEAAGPARRVI
                     IVVRSGPAGASSDTVVTGMLCGAP"
     gene            complement(3715..>4758)
                     /locus_tag="VF061_08965"
     CDS             complement(3715..>4758)
                     /locus_tag="VF061_08965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669675.1"
                     /translation="QMAGRNTFMAAQAAEAAEAGLNDAVAGQTATGLLNLAINSNLGA
                     GTPLADLPVGYRTTATRTINRLTENVFLVRSIGTRTDAAGGQLASRTIGQLIRLMQPD
                     IAVNAGLTALGNVTITGGAEVTGIDGVPTDWVDPSVSCPPLGNVTGVRYNGGTLTITG
                     AGAVAGAPDSTLDGTLNPTDMQEDFDKLKALATLIITNPNPPEMAPAYTASVPPRCDT
                     SVQTNWGEPILPTDPCFDYFPIIYRNGNLKLQGGRGQGILLVEGDLEATGGMIFYGPV
                     MVTGTLSTSGNSGQGAKFFGGVIAGNVALDDLSKLAGGALVSYSSCAIHRALQHSATV
                     GTLAERSWVQLYQ"
BASE COUNT          720 a         1666 c         1667 g          705 t
ORIGIN      
        1 ggtgtacgcc tggatgtcga tcgtgcggcc gttgacgagg aagctcaccg gcaggttgac
       61 cggcaccgcc tgcgcggcgg cgctgtcggc cgcggccttc ttggccccgc gcgcgggcgg
      121 ctgcggctgc accggctgca ccggggtcgc cggcgcggcc ttggcgagat ccaccagcca
      181 ggtgtaggcc ggcagcgcct tggtgacctc gtccagcaca tgcgcccaga cgtagcggtc
      241 gccgtccacc gtgcggatga cgccgatctg ggcgacgagc gagtcgcgga tcgtctcctg
      301 gtgccgcttc tcggcgagga acgccttgaa gcgcttgtgc tcggaccggg tggcctcgag
      361 ctgcggctcc agcgcgttca gctcatgggt ggtgcccacg acgacgtagc cgagccagcc
      421 cagcacgccc acccagcacg ccgcggaggc gagcagcagc gggtccttca ccttgccgcc
      481 cagaccgcgg acgccttcca tgactccccg gaagggagac cgggcccgct tgcgcttcag
      541 gtcaggacga agattgacgg tgatcatcgg gtatcgagtc cgttgtcggg gtcacgccgc
      601 gctgcgaagc gcgaggccga tcgggagcat cagcaagggc gccacttcat ccaccggcat
      661 gcgatcgaac acgccgtcgg ccacctggag cttctcgatc gggttggcca gctgcaccgg
      721 aatccggagc cggtcggaca gcaccttgtt gagccgcggg atccgggcgc cgcctccggt
      781 ggtgaagatc cgggagatcc cgccggccga ccggctggaa gactgcagga aggcggtcgc
      841 acgctcgatg ccgacggcga gctcctcacc ccggccctcg agtagcggat cgagcgcatc
      901 gctggagctg gcgccgcgaa gcagggcgtc ggcctcgtcg gcggagagcc cgcgctcgcg
      961 ctggagatcc tccttgaacc ggcgggtgcc gatcgggatg tcgcgggtga ggaccgggat
     1021 cccgtcgtcg aggatgttga tgttggtggt ctcgtggccg atgttgacca gccccaccac
     1081 cccgaccatc gcctcgggat agttgatctc gaaggcgttg tggagcgcga aggcatccac
     1141 gtcgatgacg ctcgcgtcga gcccgatctc ggacaggagg gcgaccttgt gctccaccag
     1201 ctcgcgcttg gcggcgacca ggagcacggt catctggagg ccttcgccct cggggtcgag
     1261 gatctggaag tccagctcca cgttgtccat gtcgaacggc acgtgctgct ccgcctccca
     1321 gcggatcacc tcccgcgcct cggcttcctt cattcggtcc atgctgatct tcttgatgat
     1381 cacgtcccgc ccgcccacgg ccgtcaccac cttcttggcc ttgataccgg cggaggccat
     1441 caggtccttg atcgcgtcgg cgacgatgcc cgggtccatg acctcgccct cgacgatggc
     1501 gtcgttcacc acggaggtga acgccacctt ggtgaggacc ggcccgcccg aggcgtgaga
     1561 aatgacgacg agtttgatca ggccgcttcc gatatcgagg ccgaccgtcg tcgcgctacg
     1621 cccgaagagt cccatacgtg tccgatggtt gaggtggcga agccgagcca tgggtatagt
     1681 tctgcgggga agagggcaac cgatgtgcca acaaattgca gcctgctaag cagatggacc
     1741 gtgcgggctt agtcctggcc cggcggggcc ggtgcaacgc ttgtagcgcc cccaatcttc
     1801 tctttcgcaa gccgtctctc gggatgcact acccgcgcca ggtgcaactc ttggcacggg
     1861 accggcttcc ggcccctcac caggaccacg cgcggtggcg caggggccat acgggcggga
     1921 ccccggggac cgcgctatcg gccacccgga cgaggagcgc gacgtcccgc cgggccagcg
     1981 tcccgccggc cgcatcggtg cgcaccccgg tgacccgcac caggaacagc tggccgttca
     2041 gccgggtgac gatgggcacg tagccggcgc tcccgggcag cggagccggg cgcaacgtcg
     2101 cgctgtcgcc cggagcgagc cggtcgagac cgagcccttc ccactcgtcc acgaccgcga
     2161 cggcaccggc ctcggcggcg cccgcggctt ggaccgcgta gagcgtgttc cgccccacgc
     2221 gctgctcgag aaaggcgccc gcgaacccgc cagcaacgat cgccgccatc accaccaggg
     2281 cgagcagcgc gagcggcagg gccattcccc gcgccgccaa actcacggac ggagcccgtt
     2341 gcggggcgcc acccgggtgg tcaacaccag gctgtccacc agaggtcggc gcggatcgcg
     2401 gcggtgaatc ggatactcgg tgacgccgac cagggcgatc tcgatggccc gcaccgccgc
     2461 ggcgtctgag gtcgagccat cggcggcatc gcgatagacc agcgtcaggc cgcgcacgcc
     2521 ggccccgctg tcggcgaggg gcccggccac gggggtcacg gcctcgccgg tgctgaccga
     2581 ccgcatgccg aaccaggact tgccgccagc gcggtagtac cgcatctgca tcacttcggt
     2641 caggcggacc ggcgatcccg gggtgacgag atccagggcc gcagggtcga gcggtgccgg
     2701 cgcagcgacc acaagcgcga tgcccgtctc gcctccggga cagattccct ggccggccga
     2761 cacgactccc aggtggatcc aggcatcgtc ggagccggtg gcggggtttc cctccgcgaa
     2821 caccaggagc gagtcggtgg cgcggggagc gcgaggcgac tcccacgtcg atgcctcgat
     2881 cacgatctcg ggctgcgggc tactggctgc ccgacacacc cgtccgccgc cccgcgccgc
     2941 gaggtaggtg accgccccgg gctcgatggc gaagaggtcg ctccggacgg cggccgggga
     3001 accgagcgcg accgcggctt cgggcgtgat ctcgtcgtac ccgatctcgc ccagctcgcc
     3061 ggccagcacc agcgccgcgg tgcggacatt ctcgttcagg gccgcccact cggcctgcgc
     3121 gcgggcgaga cgctggccgt ggagcagaac ccggtggacg agccctccga ccatgagacc
     3181 cagcgccatg gcgacgacga gctcgaccag ggtaaacccc cggcgcgcgc tcatggggcg
     3241 ccgcagagca tgccggtgac cacggtgtcg ctcgaggccc cggcagggcc ggagcgcacg
     3301 acgatgatca cccgccgcgc ggggcctgcc gcctcaccga tctgccagct ctcggtgagg
     3361 ccgccgccgg ccgcgttgcc gctcctccat tccgcgctgg tgcacgcggg tacggtagag
     3421 aacgcgatct ggcgcagccg ctcgatccgc gcgaacgcca cctggccggc ccgggtggaa
     3481 tggcgtccct ggcccagcat acggctcgtc agcgcggccg acccgagcaa ggcgaggacg
     3541 ccgaccgaca gcaccaccag cgcgaccacc gcctcgacga tggtgaaagc gctcctgccc
     3601 gcaacgcgca ctgtcccgtc ctcccgtgtc gggggtgacg ggacagctta cgcctgccgg
     3661 aggtcgggca gggtactgaa atccttcgag cgggtgcgtc gccctgcgaa cgatctactg
     3721 gtagagctgc acccagcttc gctcggccag cgtacccacc gtggcggagt gctggagcgc
     3781 gcggtggatg gcgcaggacg aataggagac cagcgcgcca cccgccagct tcgagaggtc
     3841 gtccagcgcg acgttgccgg cgatgacacc gccgaagaac ttggcgccct gaccgctgtt
     3901 gccgctggtc gagagcgtcc cggtcaccat gaccgggccg tagaagatca tgccaccggt
     3961 cgcttcgagg tcgccctcga ccagcaggat gccctggccg cggccgccct gaagcttcag
     4021 gttgccgttc cggtagatga tcgggaaata gtcgaagcac gggtccgtgg gcagaatcgg
     4081 ctcgccccag ttggtctgca cgctggtgtc acagcgcggc ggaaccgacg cggtgtaggc
     4141 gggggccatc tcgggcggat tgggattggt gatgatcaag gtcgccaggg ccttgagctt
     4201 gtcgaaatct tcctgcatgt cggttgggtt cagggtccca tccagcgtgc tgtcgggggc
     4261 gccggccacg gcgccggcac cggtgatggt cagcgtgccg ccgttgtacc gcacgccggt
     4321 gacgttcccc agcggcgggc agctcacgct ggggtcgacc cagtcggtcg ggaccccatc
     4381 gatgccggtc acctccgctc caccggtgat cgtcacatta cccagcgcgg tgaggccggc
     4441 gttcacggcg atgtcgggct gcatcagccg aatcagctgt ccgatcgtgc gcgaggccag
     4501 ctgcccgccg gccgcatcgg tccgggtgcc gatggagcgc accaggaaca cgttctcggt
     4561 gaggcggttg atcgtccgcg tggcggtggt gcggtaaccc accgggagat ccgcgagcgg
     4621 ggtgccggcg ccgagattgg agttgatcgc cagattgagg aggccggtcg ccgtctggcc
     4681 cgcgactgca tcgttcaggc ctgcttccgc cgcctcggcc gcctgcgccg ccatgaacgt
     4741 gttccggccg gccatctg
//
LOCUS       DASUYN010000457         4229 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_581747, whole genome shotgun sequence.
ACCESSION   DASUYN010000457 DASUYN010000000
VERSION     DASUYN010000457.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4229)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4229)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4229
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_581747"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..737
                     /locus_tag="VF061_08970"
     CDS             <1..737
                     /locus_tag="VF061_08970"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX6669676.1"
                     /translation="DVETTTVGSGEEALARLQSESYDCMVLDLGLPDMTGFQLITRVK
                     SEIGLRKLPTIVYTGKQLTRREEAELRRLAESVVIKDAGSPERLLDETALFLHRATER
                     LPESKRRMLEHLHRSDPALAGRKVLIVDDDVRNIFALTTFLERSEMAVSYAESGRDGI
                     ARLQDAGDIDIVLMDVMMPEMDGYETMRAIRDQARFRNLPIIAVTAKAMKGDREKCIE
                     AGASDYIAKPVDMEQLLSLLRVWLYR"
     gene            734..2038
                     /locus_tag="VF061_08975"
     CDS             734..2038
                     /locus_tag="VF061_08975"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX6669677.1"
                     /translation="MSPGARRTDGPAAGAGAGIVDPTGLAADRPAPGPENPRSAGPPA
                     PRSADRVNILLVDDQPANLLALEAMLQGLEQNLIRAESGREALKWLLTHEFAVILLDV
                     KMPDMDGFETAAMIRERDKSRDTPIIFLTAADKTHTEAVRGYAVGAVDYLVKPVVPEF
                     VRSKVAVFVELAKKTEQLRRQAELLRESEQSARDLAEARAELVHDLEHKNRELESFSY
                     AVSHDLRAPLRRIEAFGRALAESQGERLDGNGRRFLDRIQEASRQMSQLIDDVLYLSK
                     VSRAELRQQEIDLSGLVESILERLREGEPGRTVETRVRPGVIVVGDGRLLRIALTNLL
                     ENAWKFTARQPAARIEFGTVTTAGEPAYFVRDNGAGFDMTYVDRLFGPFQRLHLASEF
                     PGSGIGLATVQRIIHRLGGRVWAEGVVGQGATFHFTLGRPRA"
     gene            2052..2441
                     /locus_tag="VF061_08980"
     CDS             2052..2441
                     /locus_tag="VF061_08980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669678.1"
                     /translation="MTPLPDDVRQFVHQNIESVEQLEVLLLLWRTPERGWTSDEVATA
                     VYSHPSSVVRRLAMLLGQGLLREREPGCYQYAPRTAELHATVTHLDHVYRERRVAVIT
                     LIASKPIENVRAFSDAFRIRRKKEDDD"
     gene            2441..2701
                     /locus_tag="VF061_08985"
     CDS             2441..2701
                     /locus_tag="VF061_08985"
                     /inference="COORDINATES: protein motif:HMM:NF039620.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5985 family protein"
                     /protein_id="HEX6669679.1"
                     /translation="MAAAVYVLCALTSLACAVLLLRAYQDRAVRLLLWSGLAFIGFAF
                     GNIMLVVDRVVVGPGMDLSIWRSLPVLVGLAVLIYGLVWDAR"
     gene            2698..2988
                     /locus_tag="VF061_08990"
     CDS             2698..2988
                     /locus_tag="VF061_08990"
                     /inference="COORDINATES: protein motif:HMM:NF039620.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5985 family protein"
                     /protein_id="HEX6669680.1"
                     /translation="MSDLRAVVALLISGAIVMGYAVTGLFFLRFWRETRDRLFVIFAA
                     AFWILGLQRLALAFSRDMVEDDTGLYLIRLFAFLLILGAIVDKNRSSPRPPA"
     gene            complement(2985..3167)
                     /locus_tag="VF061_08995"
     CDS             complement(2985..3167)
                     /locus_tag="VF061_08995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669681.1"
                     /translation="MTERKGDVRPADPAPPDLVVHKSARECPMIQPHPRALCGIVRVR
                     EETRARMDEERRRAPD"
     gene            complement(3277..>4229)
                     /locus_tag="VF061_09000"
     CDS             complement(3277..>4229)
                     /locus_tag="VF061_09000"
                     /inference="COORDINATES: protein motif:HMM:NF024832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HEX6669682.1"
                     /translation="RGVTELVGTAMAWQAYPWWPGRGFSTRVLRDLSGYSISMTYTQV
                     LYVALVRVQDVIIGRFLGTAAVGQYRTAWRTVDLIAQGVIMPFTQVALPTLGRLQDDL
                     PAFRKAYLRITAVCSAVALPAIVGFAVLAPDVIPLVFGPQWTPAAPVAQVLGLMAVPF
                     TLNRFAAPALATLGRYATLARLSSLQLVLTVVLSLAAAPYGLVAIAGAYVARAYLMLP
                     LQLRAFKRHSGLGYGEVLRSIGPAFGTSVIMAAALLALEAAAGDALRARNLFLLTAVP
                     AGALVYLAGLWAFARRFVLEQARDLRALVAGGKASTEGAR"
BASE COUNT          655 a         1460 c         1524 g          590 t
ORIGIN      
        1 aggacgtcga gaccaccacg gtgggcagcg gcgaggaggc gctcgcccgg ctccagtcgg
       61 agagctacga ctgcatggtg ctcgatctcg gcctgccaga catgaccggg ttccagctga
      121 tcacgcgggt gaagagcgag atcggcctcc ggaagctccc gaccatcgtc tacaccggca
      181 aacagctcac ccggcgggag gaggccgagc tgcggcggct ggcggagtcg gtcgtcatca
      241 aggacgcggg ctcgccggag cggctgctgg acgagaccgc gctgttcctg catcgcgcca
      301 cggagcggct gccggagagc aagcgccgga tgctggagca cctgcaccgg agcgatccgg
      361 ccctcgcggg acgcaaggtc ctgatcgtgg acgacgatgt gcgcaacatc ttcgcgctca
      421 cgaccttcct ggagcgcagc gagatggcgg tcagctatgc ggagagcggg cgggacggca
      481 tcgcccgcct gcaggacgcg ggcgacatcg acatcgtgct catggacgtc atgatgccgg
      541 agatggacgg ctacgagacc atgcgcgcca tccgggacca ggcccggttc cgcaaccttc
      601 ccatcatcgc cgtcaccgcc aaggcgatga agggggaccg ggagaagtgc atcgaggccg
      661 gcgcgtcgga ctacatcgcg aagccggtgg acatggagca gctgctctcg ctgctgcggg
      721 tatggttgta ccggtgagcc cgggggcccg gcggaccgac ggaccggcgg ccggcgcggg
      781 ggccggtatc gtggacccga ccggcctcgc cgcggaccgc ccagccccgg gcccggagaa
      841 cccacggtcc gccggtccgc cggccccacg gtccgccgac cgcgtcaaca tcctcttggt
      901 ggacgaccag cccgcgaacc tgctcgcgct ggaggcgatg ctccaggggc tggagcagaa
      961 cctgatccgg gcggagtccg gccgggaggc gctcaagtgg ctcctcaccc atgagttcgc
     1021 ggtgatcctg ctggacgtga agatgcccga catggacggc ttcgagaccg ccgccatgat
     1081 tcgcgagcgc gacaagagcc gcgacactcc catcatcttc ctcaccgccg cggacaagac
     1141 ccacaccgag gcggtccgcg gctacgccgt cggcgcggtg gactacctgg tcaagccggt
     1201 agtgcccgag ttcgtccgct ccaaggtcgc ggtgttcgtg gagctggcca agaagaccga
     1261 gcagctccgc cggcaggcgg agctgctgcg ggagagcgag cagtcggcgc gggatctggc
     1321 ggaggcccgg gccgagctgg tgcacgacct ggagcacaag aaccgggagc tggagagctt
     1381 cagctacgcc gtctcccatg acctgcgggc gccgctccgc cgcatcgagg cgttcggccg
     1441 ggcgctggcc gagagccagg gtgagcggct ggacgggaac ggccgccggt tcctggaccg
     1501 gatccaggag gccagccggc agatgtcaca gctgatcgac gacgtgctct acctgtccaa
     1561 ggtgagccgg gcggagctcc gacagcagga gatcgacctg agcgggctgg tggagtccat
     1621 cctcgagcgc ctgcgcgagg gcgagcccgg gcgcacggtg gagacccggg tccgtccggg
     1681 cgtgatcgtc gtcggcgacg ggcgactgct ccggatcgcg ctcaccaacc tgctggagaa
     1741 cgcctggaag ttcaccgccc ggcagccggc ggcgcgcatc gagttcggca ccgtgaccac
     1801 ggcgggagag ccggcctact tcgtgcggga caacggcgcc gggttcgaca tgacctacgt
     1861 cgaccgcctc ttcggaccct tccagcggct gcacctcgcc agcgagttcc ccggctcggg
     1921 catcgggctc gcgacggtgc agcggatcat tcaccggctg ggcgggcggg tctgggcgga
     1981 aggcgtggtg gggcagggcg ccaccttcca cttcaccctc ggacggcccc gcgcgtgagg
     2041 accgtacgac ggtgacgccg ctgcccgacg acgtccggca attcgtgcat cagaacatcg
     2101 agtcggtcga gcagctggag gtcctgcttc tactctggcg cacgcccgag cgcggctgga
     2161 cgtccgacga ggtggccacg gcggtctaca gccacccgtc ctcggtggtc cgccggctgg
     2221 cgatgctcct ggggcagggc ctcctgcgcg agcgggagcc cggctgctac cagtatgccc
     2281 cccgcaccgc ggagctgcac gcgaccgtca cccacctcga tcacgtgtac cgcgagcgcc
     2341 gggtagcggt gatcaccctg atcgcgtcca agccgatcga gaacgtgcgc gccttctccg
     2401 acgcgttccg gatccgcagg aagaaggagg acgacgactg atggcggccg cggtctacgt
     2461 gctctgcgcc ctgacgagct tggcctgtgc ggtgctgctg ctccgcgcct accaggaccg
     2521 cgcggtccgc ctgctcctgt ggagcggcct ggcgttcatc gggttcgcct tcggcaacat
     2581 catgctggtg gtggaccggg tcgtggtcgg cccggggatg gatctctcca tctggcggag
     2641 cctgccggtg ctggtggggc tggcggtgct gatctacggg ctcgtgtggg acgcgcggtg
     2701 agcgacctgc gcgccgtcgt cgccctcctg atctcgggcg cgatcgtcat gggctacgcg
     2761 gtgacgggac tcttcttcct gcggttctgg cgggagaccc gcgaccggct cttcgtcatc
     2821 ttcgcggccg cgttctggat cctcggcctc cagcggctcg cgctcgcctt cagccgcgac
     2881 atggtcgagg acgacaccgg gctctatctc atccgcctgt tcgccttcct cctgatcctg
     2941 ggcgcgatcg tggacaagaa ccggtcctcg ccccggccgc cggcctagtc cggcgcccgg
     3001 cggcgctcct cgtccattct ggcccgggtc tcctcgcgga ctcgaacgat gccgcagagc
     3061 gcccgtggat ggggctggat catcgggcac tcccgcgcgc tcttgtgcac caccaggtcg
     3121 ggcggggcgg ggtcggcggg gcgcacgtca cccttgcgct cagtcatgga atgcggtcga
     3181 gagacgcggc ggttggacgg agggataccg catgccgaga cgatacacgg ggaccggccc
     3241 ccaggccagc accgttcgac gcgactcggc gcatccctac ctcgcgccct cagttgaggc
     3301 cttaccgccg gccaccagag ccctgagatc gcgggcctgt tccaggacga agcgccgggc
     3361 aaaggcccac aggccggcca ggtacaccag cgccccggcc gggaccgccg tgaggaggaa
     3421 gaggttcctg gcccgcagcg cgtcgccggc cgccgcctcc agggcgagca gcgccgccgc
     3481 catgatcacc gaggtcccga aggccggccc gatggagcgc agcacttccc cgtagcccag
     3541 gccgctgtgg cgcttgaacg cccggagctg gagcggcagc atgagatagg cccgggcgac
     3601 gtaggccccc gcgatcgcga cgagtccgta cggggccgcc gccaggctca gcaccaccgt
     3661 gaggacgagc tggagactgg agagcctcgc cagggtcgcg tagcgcccca gcgtggccag
     3721 agcgggcgcg gcgaagcggt tgagggtgaa cgggaccgcc atgagcccga gcacttgagc
     3781 cacgggcgcg gccggcgtcc attgcggccc gaacaccagg ggaatcacgt ccggcgccag
     3841 caccgcgaat cccacgatcg ccggcagcgc gacggcagag cagacggccg tgatccggag
     3901 ataggccttt cggaaggcgg gcaggtcatc ctggaggcgt cccagcgtgg ggagcgccac
     3961 ctgggtgaac ggcatgatca cgccctgcgc gatcaggtcc accgtccgcc aggcggtgcg
     4021 atactgcccc accgccgcgg tgccgaggaa gcgaccgatg atcacgtcct ggacccgcac
     4081 cagggccacg tagagcacct gggtgtaggt catggagatg ctgtagcccg acaggtcgcg
     4141 gagcacccgg gtggagaacc cgcgaccagg ccaccagggg taggcctgcc acgccatggc
     4201 ggtcccgacc agctcggtga cgccgcgct
//
LOCUS       DASUYN010000458         3367 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1246004, whole genome shotgun sequence.
ACCESSION   DASUYN010000458 DASUYN010000000
VERSION     DASUYN010000458.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3367)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3367)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3367
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1246004"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..856)
                     /locus_tag="VF061_09005"
     CDS             complement(<1..856)
                     /locus_tag="VF061_09005"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HEX6669683.1"
                     /translation="MSLLVVGSVALDSIFTPFGETADALGGSAVYFSVAGSILHPVQV
                     VGVVGGDYPVHELESLTKRGIDWSGVERAEGESFRWKGKYSYDLQSRETLETRLGVFA
                     QFQPKIPEGFRAAEYVFLGNIDPELQVGVLDQVKRPKLVVCDTMNYWIQGKREALLEL
                     LARVDLLMVNDSEARELSGDWNIHRAGRWILRHGPSRVVIKQGEYGALLIEATRTFYV
                     PAFPLESVFDPTGAGDAFAGGFMAYLARTGSLSEDNIRRAMVYGAAMGSYAVEQFGIR
                     AFERLTLAD"
     gene            complement(862..2505)
                     /gene="argS"
                     /locus_tag="VF061_09010"
     CDS             complement(862..2505)
                     /gene="argS"
                     /locus_tag="VF061_09010"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HEX6669684.1"
                     /translation="MSEPIRAELERVAAGFGADGLEFVLERPRDTGHGDLATNLAMLL
                     ARRARVKPRDMAEKVVAELRLPSSLVSRTEIAGPGFINFWLAEQQLAAALATILEQGP
                     AYGRAVEGAALKINVEFVSANPTGPLHVGHGRGAALGDAIASLYEWTGHAVTREFYIN
                     DAGVQIDRLGESLWARVRQEAGFEGQIPDGGYHGEYLRECARRILAQEGPGFAELPAE
                     EGIRRARALGVRMQREEQDRDLADFGVRFEVLSSEQAIYDAGRVTGAIELLAERGLTY
                     EAEGALWLRTTQFGDDKDRVLRKSDGSLTYLVPDIAYHIDKHDRGFDRAIDVWGADHH
                     GYIPRMRAVLLALGYPHDFFGVELVQLVKVLREGQEVKMSKRSGEFVTLRDLVDEVGV
                     DAARYFFLSRKGASPLDFDVELAKKQTDENPVFYVQMAHARLSGIFRTAERDPDSVTG
                     DLDLEALPAPQDTELLKKLVTFPDVVTRASRDREPHRITVFLHELATVIHGWYHHTRA
                     VGAPEGAATERARLLLARAARIVLANALTLLGISAPDRM"
     gene            complement(2502..2834)
                     /locus_tag="VF061_09015"
     CDS             complement(2502..2834)
                     /locus_tag="VF061_09015"
                     /inference="COORDINATES: protein motif:HMM:TIGR02605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HEX6669685.1"
                     /translation="MPTYEYECPEGHTFEKFQKISDKPRAKCPVCGKPATRKISGGAG
                     LVFRGSGFYITDYGKDGKGPRKPDAEKPAKTSESSGASGASESTAKPDTSSSKPATGK
                     GGGKAAKE"
     gene            complement(2956..>3367)
                     /locus_tag="VF061_09020"
     CDS             complement(2956..>3367)
                     /locus_tag="VF061_09020"
                     /inference="COORDINATES: protein motif:HMM:TIGR04256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GxxExxY protein"
                     /protein_id="HEX6669686.1"
                     /translation="HHEDTKDTKGAKASAMVLSHGIVGAAIEVHRHLGCGLLESVYET
                     ALCRELSLRGITAERQVHVPLEYKGLPLDLSVRLDLLVQRLVVVEVKSVDRLLPIHRA
                     QILTYLKLTCRPLGLLINFNVELLRTGVRRLLNG"
BASE COUNT          519 a         1136 c         1162 g          550 t
ORIGIN      
        1 cgtcggccag ggtgaggcgc tcgaacgcgc ggatgccgaa ctgctctacg gcgtacgacc
       61 ccatggcggc gccgtacacc attgcgcgcc ggatgttgtc ttccgacagc gagccggtgc
      121 gcgccaggta cgccatgaac cctccggcga aggcgtcgcc cgccccggtc ggatcgaaca
      181 ccgactccag cggaaaggcg ggcacgtaga aggtccgggt cgcctcgatc aggagggcgc
      241 cgtactctcc ctgcttgatc accacgcggc tgggtccgtg gcgcaggatc cagcgtccgg
      301 cgcggtggat gttccagtcg ccgctcagct cgcgggcctc gctgtcgttc accatcagga
      361 gatccactcg ggcgaggagc tcgagcaggg cctcccgttt tccctggatc cagtagttca
      421 tcgtgtcgca gaccaccagc ttcggccgct tgacctgatc gagcacgccg acctgcagct
      481 cggggtcgat attgccgaga aagacgtact cggcggcgcg gaagccctcg gggatcttgg
      541 gttgaaactg ggcgaacacg ccgaggcggg tctccagcgt ctcccggctc tggaggtcgt
      601 agctgtactt ccccttccag cggaaacttt cgccctcggc gcgctccaca cccgaccagt
      661 cgattccccg tttcgtcagc gactcgagct cgtgcaccgg gtagtcgccg cccaccacgc
      721 cgacgacctg cacggggtga aggatcgatc cggcgacgct gaagtacacg gcggaccccc
      781 ccagggcgtc cgcggtctcg ccgaacggcg tgaagatcga gtccagcgcc acgctgccca
      841 ccacgaggag gctcatcggg gtcacatccg gtcgggggcg gagatgccca ggagggtgag
      901 agcgttggcc aggacgatgc gcgccgcgcg agcgaggagc agccgcgcgc gctcggtcgc
      961 cgctccctcc ggcgcgccga ccgccctggt gtgatggtac cagccgtgga tcacggtggc
     1021 gagctcgtgg aggaagacgg tgatgcggtg cggctcccgg tcccgcgatg cgcgggtcac
     1081 gacgtcgggg aaggtcacca gcttcttcag cagctcggtg tcctgcgggg ccggaagcgc
     1141 ctcgagatcc agatcgccgg tcacggagtc gggatcccgc tccgccgtcc ggaagatgcc
     1201 gctcagccgc gcgtgcgcca tctggacgta gaagacgggg ttctcgtcgg tctgcttctt
     1261 ggccagctcc acgtcgaagt cgagcgggct ggcgcccttc cgggagagga agaagtaccg
     1321 cgcggcatcc acgccgacct cgtccaccag gtctcgcagg gtgacgaact cgcccgagcg
     1381 cttggacatc ttcacctctt ggccctcgcg cagcaccttg accagctgca ccagctcgac
     1441 gccgaagaaa tcgtgggggt agcccagggc cagcagcacc gcccgcatcc gcgggatgta
     1501 gccgtggtgg tccgcgcccc agacgtcgat ggcgcggtcg aacccgcggt cgtgcttgtc
     1561 gatgtggtag gcgatgtcgg gcacgaggta ggtcagcgag ccgtcgctct tccggaggac
     1621 gcggtccttg tcgtcgccga actgggtggt gcggagccag agcgccccct cggcctcgta
     1681 ggtgaggccg cgctcggcga ggagctcgat ggcgccggtg acgcggccgg cgtcgtagat
     1741 ggcctgctcg gagctcagca cctcgaagcg gacgccgaag tcggcgagat cccggtcctg
     1801 ctcctcgcgc tgcatccgga cgccgagcgc ccgggcgcgg cggatgccct cctcggcggg
     1861 cagctcggcg aatccggggc cctcctgagc caggatccgg cgcgcgcact cccgcagata
     1921 ctcgccgtgg tagccgccgt cgggaatctg gccttcgaag ccggcctcct gacggacccg
     1981 ggcccagagg ctctccccca ggcgatcgat ctggacgccc gcgtcgttga tgtagaactc
     2041 gcgggtgacc gcgtgcccgg tccattcgta gagcgaggcg atcgcatcgc ccagcgcggc
     2101 gcctcggccg tgtcccacgt ggagcggccc ggtcggattg gcggagacga actcgacgtt
     2161 gatcttgagc gccgcgccct cgacggcgcg gccgtacgcc ggaccctgct ccaggatggt
     2221 cgccagggcg gcggcgagct gctgctcggc gagccagaag ttgatgaagc cggggccggc
     2281 gatctcggtg cgggagacga gtgaggacgg gagccgcagc tccgccacca ccttctcggc
     2341 catgtcccgg ggcttgaccc gcgcccgccg ggcgaggagc atggcgaggt tggtggccag
     2401 gtcgccgtgg ccggtgtcgc gggggcgttc gagcacgaac tccagcccgt cggcgccgaa
     2461 cccggcggcc acgcgctcga gctcggcccg gatcggctcg ctcactcctt ggcggccttc
     2521 cccccgccct tgcccgtcgc cggcttggac gaggaggtgt cgggcttggc cgtgctctcc
     2581 gaggcaccgg acgcccccga actctcggac gtcttggccg gcttctcggc gtccggcttc
     2641 cgaggcccct tgccgtcctt gccgtaatcg gtgatgtaga aaccgctccc ccgaaacacg
     2701 agccccgccc caccggagat cttccgggtt gccggcttgc cgcacacggg gcatttggcg
     2761 cggggcttgt cgctgatctt ctggaacttc tcgaaggtat gaccctcggg gcactcgtac
     2821 tcgtaggtcg gcatcggcac tcggttgggg aggtaaatga aatcagcgga ggaacttagc
     2881 tgcatcgacg cggcggttca aggcgaggct gctggagcat tcaccacgaa ggcacgaagg
     2941 acacgaaggg ttcagtcagc cattgaggag gcgtctgact cccgtccgga gaagctccac
     3001 gttgaagttg atgagtagtc cgagtgggcg gcacgtgagc ttcaggtatg taagaatttg
     3061 agcgcggtga atcgggagca ggcgatcgac ggacttcact tcgacgacga ccaagcgctg
     3121 gaccagcagg tcgagccgaa cgctgaggtc gagtggcagg cccttgtact ccaaggggac
     3181 atgaacctgg cgctcggccg tgatcccgcg gaggctgagc tcacggcaca gcgccgtttc
     3241 gtacactgat tccaacagcc cgcatcccag atgtctgtgc acttcgatcg ccgcaccgac
     3301 aatcccgtgc gacagcacca tcgcgcttgc cttcgcgccc ttcgtgtcct tcgtgtcttc
     3361 gtggtga
//
LOCUS       DASUYN010000459         2042 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1467145, whole genome shotgun sequence.
ACCESSION   DASUYN010000459 DASUYN010000000
VERSION     DASUYN010000459.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2042
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1467145"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(131..1297)
                     /locus_tag="VF061_09025"
     CDS             complement(131..1297)
                     /locus_tag="VF061_09025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HEX6669687.1"
                     /translation="MTDTVSTAPSALTTLSEEESLFRDAVREFAEAEVRPLVYAMDEA
                     AKFEPSLIPKFFELGLMGIEVPERLGGAAGSIFMAVLAIEELARVDASAAIYVDVHNT
                     LVNNALLRWASPEQHERYFPRLTSDLLGAFALSEPGSGSDAFALATKAERRGDRWELT
                     GTKFWITNGAEAGLFIVFANTDFAKGYKGITGFIVERDFPGFTVGKKENKLGIRASST
                     TELILDQCVVPAENVLGPVGQGYKIAIETLNEGRIGIGAQMIGVASGALEAATAYVKE
                     RKQFGKAIAEFQGVQFQLAQMATDVEAARLMVYNAARLKDAGQPFQQQAAMAKLFSSQ
                     VADRTTSNCLELFGGYGYSKEYPAEKFYRDAKIGTIYEGTSNMQLQTIAKTLLK"
     gene            1481..>2042
                     /locus_tag="VF061_09030"
     CDS             1481..>2042
                     /locus_tag="VF061_09030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669688.1"
                     /translation="MSYDASVEAWIDMYHSIRRLARQDTLIFLTDNAVGQAEEENLGH
                     LTANLAGEVAPARIVPFLTAKHSLDYIQLYAARAASHGFEALTVVGGDVSGGLPRCFP
                     HAYQLRQWVRRRVPSLDLGAWVNPLRDPVRQVDFLLDPGFEAEFYLTQVVSHHSIGEV
                     ERFLGEARRRGVSCPGAFGVFLYRSPN"
BASE COUNT          308 a          699 c          682 g          353 t
ORIGIN      
        1 gacacgaccg gcacgtccag ctgggacacg accgggcagc agtaagaccc cgatcgtcag
       61 ctcggtgacc gcaaaccgac gggggcgccc tagggcgccc ccgtctcggt tgtcggcagc
      121 cgcgccggcg ctacttgagg agggtcttcg cgatggtctg gagctgcatg ttgctggtgc
      181 cctcgtagat cgtgccgatc ttggcgtccc ggtagaactt ctcggccgga tactccttgg
      241 agtagccgta gccgccgaag agctccaggc agttggaggt ggtgcggtcc gccacctggg
      301 agctgaacag cttggccatc gccgcctgct gctggaacgg ctggccggca tccttcaaac
      361 gggcggcgtt gtacaccatg agcctggccg cctccacgtc ggtggccatc tgggccagct
      421 ggaactggac cccctgaaat tccgcgatgg ccttcccgaa ctgcttccgc tccttgacgt
      481 atgcggtggc cgcctccagc gcgccggacg ccaccccgat catctgcgca ccgatcccga
      541 tgcgtccctc gttcagcgtc tcgatggcga tcttgtagcc ctgccccact ggtccgagga
      601 cattctcggc gggcaccacg cactggtcca ggatgagctc ggtggtgctg gaggcacgga
      661 tgccgagctt gttctccttc ttgcccaccg tgaagccggg gaagtcgcgc tccacgatga
      721 acccggtgat ccccttgtag cccttggcga agtcggtgtt ggcgaagacg atgaagagcc
      781 cggcctcggc gccgttggta atccagaact tggtgccggt gagctcccag cggtcgcccc
      841 ggcgctccgc cttcgtggcc agcgcgaagg cgtcgctgcc gctccccggc tcggagaggg
      901 cgaacgcgcc caggaggtcg gacgtcagac gcggaaagta gcgctcgtgc tgctcggggc
      961 tggcccagcg gagcagcgca ttgttgacca gcgtgttgtg gacgtccacg tagatcgccg
     1021 cggacgcgtc cacccgggcc agctcctcga tggccagcac cgccatgaag atgctgccgg
     1081 ccgccccgcc caaccgttcc gggacctcga tgcccatcag cccgagctcg aagaacttcg
     1141 ggatcaggga gggctcgaac ttcgccgcct cgtccatcgc atagaccagc ggccgcacct
     1201 cggcttccgc gaactcgcgg accgcgtccc ggaagaggct ctcttcctcg gacagggtcg
     1261 tcagggcgga tggcgcggtg gacacggtgt cggtcatggg tgggctcggg tcgaggtggg
     1321 cggtcagttg aagataccgg aggggcggga aagcgccaaa gggcttacgt ttccccaccc
     1381 gatgacgacc agttccaccc caggccgaag ctccgtcgtg cgccgcctcg cggaggaccg
     1441 gccgcttgtg gccgtcgagc ttcgtccgcc gcggagcggg atgtcctacg acgccagcgt
     1501 ggaggcctgg atcgatatgt atcactcgat ccgccgcctg gcccgccagg acaccctgat
     1561 cttcctcacc gacaatgccg tcggccaggc cgaagaagag aacctcgggc atctcaccgc
     1621 caatctcgcc ggcgaggtcg ccccggcgcg gatcgtccca ttcctgacgg ccaagcattc
     1681 gctggactac atccagctct acgccgcacg cgcggcatcc cacggcttcg aggcgctgac
     1741 ggtcgtgggg ggcgatgtgt cgggtggtct gccccgatgc ttcccccacg cctaccagct
     1801 gcgccagtgg gtgcgccggc gggtgccctc cctcgatctg ggcgcgtggg tgaacccgct
     1861 cagggacccg gtcaggcagg tggacttcct gctggacccc gggttcgaag cggagttcta
     1921 cctgacccag gtcgtctccc accattcgat cggggaagtg gagcgatttc tgggcgaggc
     1981 ccggcgccgc ggggtatcgt gcccgggggc gttcggtgtg ttcctctacc gcagccccaa
     2041 tc
//
LOCUS       DASUYN010000460         2445 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_802122, whole genome shotgun sequence.
ACCESSION   DASUYN010000460 DASUYN010000000
VERSION     DASUYN010000460.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2445)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2445)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2445
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_802122"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     regulatory      complement(<1..98)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            complement(143..1201)
                     /locus_tag="VF061_09035"
     CDS             complement(143..1201)
                     /locus_tag="VF061_09035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669689.1"
                     /translation="MTGTVVRPSAGDTVPVSGARVVLHRVGSAEQGPVDSVPSGAGGR
                     FRFALVRDTADLYLLSARYQGIEYFTLPLDRAPERDPETVTLVVHDTSSRTPVTVSAR
                     HVVIPRPGDDGTREVLDLILLANAGTETRVAPDSQGASWSGPLPPESEGLDLGESDVS
                     PDAVTRRGDSVIVSAPISPGEKQLAFQYHLRGGRQAVELPVGAESVALSVLLEEPAAS
                     VSGPGLVEVDGQTLEGRSFRRWSGDVPANAVIRIALPGAGSGTTPVIAVLVTVLALAL
                     VVAAWRILARGRTAAAPPAVKGDASDRILNEIAALDARYEGREAETPSEEWSRYRERR
                     AALKAEAAAALARGSRGP"
     gene            complement(1255..1746)
                     /locus_tag="VF061_09040"
     CDS             complement(1255..1746)
                     /locus_tag="VF061_09040"
                     /inference="COORDINATES: protein motif:HMM:NF014618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional nuclease family protein"
                     /protein_id="HEX6669690.1"
                     /translation="MIEVTVAHLGLDRTTNTPVVILREKEGARVLPIWIGPAEASAIA
                     MELQGMKAQRPLTHDLLKQILVGLGGDLRRVVISAVKENTYFAELLIRRDDHVFQVDA
                     RPSDSIALALRMRAPIFTSDQLLDQNGVETDEPSPNPSLEADKLKEYLEKMDPQDFGK
                     FNP"
     gene            complement(1851..>2445)
                     /locus_tag="VF061_09045"
     CDS             complement(1851..>2445)
                     /locus_tag="VF061_09045"
                     /inference="COORDINATES: protein motif:HMM:NF012875.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="adenosylhomocysteinase"
                     /protein_id="HEX6669691.1"
                     /translation="GVAMRARGAGAHVVVTEVDPLPALEARMDGYDVRPMADAAPIGD
                     LFITLTGNLHVIRAEHFAAMKDGAIVCNSGHFNVELDLEGLGRIASERRTVRNLVEEF
                     VVKGRRIVVLGEGRLINLAAAEGHPASVMDMSFANQALAAELLAREFKTLGKAVHRLP
                     VAVDQEIARLKLQSMGISIDTLTSEQVEYLASWDAGT"
BASE COUNT          349 a          880 c          838 g          378 t
ORIGIN      
        1 cgggcctccg ctcgccttcc cggttgccca gtggcgtcgt gagcggagtg gtgcgcccgt
       61 cacagtggcg gggccgcgcc ggtctctcac cggcttccga gcgtcccccc tcgcgtacga
      121 tcgtctgacc agcgcggcaa gtttaggggc cgcgcgaccc ccgggcaagt gcggccgcgg
      181 cctccgcctt gagcgcggcc cggcgctccc ggtaacggct ccactcctcc gacggggtct
      241 cggcttccct gccctcgtag cgcgcatcga gcgccgcgat ctcgttcagg atgcggtcgc
      301 tggcgtcccc ctttacggcc ggcggcgccg cggcggtccg gccgcgcgcc aggatgcgcc
      361 aggcggccac caccagggcc agcgccagca ccgtcaccag caccgcgatc acgggtgtgg
      421 tcccggagcc tgcgccgggc agcgcgatcc ggatgaccgc gttcgccggc acgtccccgc
      481 tccagcggcg gaacgagcgt ccctcgagcg tctggccgtc cacctcgacc agcccggggc
      541 ccgagaccga cgcggcgggc tcctccagca gcacgctgag cgccacgctc tcggcaccca
      601 cgggcagctc gaccgcctga cggcccccgc gcagatggta ctggaaggcg agctgtttct
      661 ctcccggcga gatcggggcg gagacgatca ccgagtcccc ccgccgggtc acggcgtcgg
      721 gcgagacgtc gctctcgccc aggtcgagac cttcgctctc cggcggcagc ggcccgctcc
      781 aggacgcgcc ctgcgagtcg ggcgccaccc gggtctccgt gcccgcattg gcgagcagga
      841 tcagatcgag cacctcgcgg gtgccgtcat cgcccgggcg ggggatcacc acatggcgag
      901 ccgacacggt caccggggtg cggctcgagg tgtcgtgcac caccagggtc accgtctcgg
      961 gatcccgctc cggggcgcgg tcgagcggca gggtgaagta ctcgatgccc tgatagcgcg
     1021 cgctcaggag gtagaggtcg gcggtgtccc gcacgagcgc gaaccggaag cggcctccgg
     1081 cgccgctcgg caccgagtcc accgggccct gctccgccga accgacccgg tggagcacga
     1141 cccgcgcgcc ggacaccggc accgtgtcac cggccgacgg gcgcaccacc gtgcccgtca
     1201 cggactgggc ggcgaggggt ccggcgagga atgtgaggag agccagcgtg ggcttcaggg
     1261 attgaacttc ccgaaatcct gcgggtccat cttctcgaga tattccttga gcttgtccgc
     1321 ctcgagcgag ggattgggcg agggctcgtc ggtctcgacc ccgttctggt cgagcagctg
     1381 atcgctggtg aagatcggcg cacgcatcct gagggcgagt gcgatgctgt ccgatggcct
     1441 cgcgtcaacc tggaagacgt ggtcgtcgcg ccggatgagc agctcggcga agtaggtgtt
     1501 ctccttcacc gcgctgatca ccacccgccg cagatcgccg ccgagaccca cgagaatctg
     1561 cttgagcagg tcgtgggtca gcggccgctg ggccttcatg ccctggagct ccatggcgat
     1621 ggcgctcgcc tcggcgggcc cgatccagat cggcaggacc cgggctccct ccttctcgcg
     1681 caggatgacc accggggtgt tagtggtccg gtcgagtccc agatgggcca cggtgacttc
     1741 gatcatttct gcgcctcgaa ccgcgtgaag gtgaaaagta aaaggtgaaa cggagaagca
     1801 ccgcatcccc cttttcaccc tttacgtttc acttttcacg ctcctgagaa tcaagttccc
     1861 gcgtcccagc tggcgaggta ctccacctgc tcggacgtga gcgtgtcgat gctgatgccc
     1921 atgctctgga gcttgagccg ggcgatctcc tggtccactg cgaccgggag ccggtgcacc
     1981 gccttgccca gggtcttgaa ctcccgcgcc agcagctcgg ccgcgagcgc ctggttggcg
     2041 aacgacatgt ccatcacgct ggccggatgc ccttcggcgg ccgcgaggtt gatgaggcgg
     2101 ccctcgccga gcacgacgat gcgccggccc ttcaccacga actcctcgac caggttgcgg
     2161 accgtgcggc gctccgaggc gatccggccc agcccctcga ggtcgagctc gacgttgaaa
     2221 tggccggagt tgcagacgat cgccccgtcc ttcatggcgg cgaagtgctc ggcccggatg
     2281 acgtggaggt tacccgtgag ggtgatgaac aggtcgccga tcggggccgc atccgccatg
     2341 ggccgcacat cgtagccgtc catcctggcc tcgagcgccg gcagcgggtc cacttcggtg
     2401 acgaccacgt gcgcgccggc gccccgggcg cgcatcgcga cgccg
//
LOCUS       DASUYN010000461         3534 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_583832, whole genome shotgun sequence.
ACCESSION   DASUYN010000461 DASUYN010000000
VERSION     DASUYN010000461.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3534)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3534)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3534
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_583832"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..309
                     /locus_tag="VF061_09050"
     CDS             <1..309
                     /locus_tag="VF061_09050"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: protein motif:HMM:TIGR00589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HEX6669692.1"
                     /translation="RPFPYPDYLKRWFDLSPAQVSVFKTLRKIPLGETRSYDDVARAT
                     SLHPRQIGWLVAANHLAILIPCHRVVGKDGSLVGYGGGLAKKRWLLDHELRAAGVVLR
                     "
     gene            604..804
                     /locus_tag="VF061_09055"
     CDS             604..804
                     /locus_tag="VF061_09055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002633565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEX6669693.1"
                     /translation="MAKGTVKWFNDAKGFGFIAQDGGKDVFVHHTAIIAEGFRSLSEG
                     DNVEFEVVEGPKGLQASNVRKV"
     gene            920..1468
                     /locus_tag="VF061_09060"
     CDS             920..1468
                     /locus_tag="VF061_09060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669694.1"
                     /translation="MTHRPVLVSLVIVLLLLFPAAVSASPPGLAAQDTSAHRFRGFRA
                     GARLDEMDALVRRAGGGGLRCDRAKRDPRVSECRGIVPDSVGPMRIWVSAMDSVAGIV
                     TLSAAVDSSGLSRWRRELERAYGRVAPKVQGGQTMLQWVRRGRMLRLTWRSERGELTA
                     SVSLVDGRVLDAWGAEREARSR"
     gene            complement(1460..1741)
                     /locus_tag="VF061_09065"
     CDS             complement(1460..1741)
                     /locus_tag="VF061_09065"
                     /inference="COORDINATES: protein motif:HMM:NF013844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HEX6669695.1"
                     /translation="MRDWSDGEPAAQLDLHGLSVLEAVASAEHFLLAQRRARPGATVR
                     VVTGRGRSGGGAPIRTRVRTLLRRMREEGRVVRDYLLEDTEGSFLVRLA"
     gene            1887..3017
                     /locus_tag="VF061_09070"
     CDS             1887..3017
                     /locus_tag="VF061_09070"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX6669696.1"
                     /translation="MAAAALTTLLLACGQADGGPVRIGVAGSFSDPIGTPMQLAAELA
                     AAEINAAGGIDGRPIELVLRDDYADPDSAVFIASDLYESDVSAVVGHLFSGTTLAAAP
                     VYNGGADPIAAISPSSSSPEVTSAGDHTFRICPSDLAHGAALAHWVRERLGFERGAVL
                     YLNDQYGRGIRQTFVEQFLRLGGRLESVDPYLGDRPDVGPYLDRMVRNRSIQFLVVAG
                     NRGEGEEVIRQARRRGLTVPILGGDGLEGIEGAGALAEGVYLTSAYFPNLPTGANRKF
                     VEAYQRKYPGAGMPNQPAAATYDAIYLLREVIARAGTDRQAVRRALAGVGSETPAFEG
                     VTGLVAFDAAGDVPDQNVYIGKVRAGAVEVADRTEVAQGQQP"
     gene            3014..>3534
                     /locus_tag="VF061_09075"
     CDS             3014..>3534
                     /locus_tag="VF061_09075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669697.1"
                     /translation="MMRSLRSRVVGGMVLLIGLVFVIALLGVSAIRSLDQSVERELSL
                     LMETTDLGNGLISSVASEVRSAEQYLVRPAQELRLKVLEQGDSAYALQRRYRGLASLT
                     TSDRYIVNQIAENQAQIEVAYAMAHAHTDLGRPEEARRYADLARSPSDTLLRDVRSLS
                     LAQTSRSMERAAAL"
BASE COUNT          486 a         1270 c         1197 g          581 t
ORIGIN      
        1 cgtcccttcc cctaccccga ctacctcaag cgctggttcg atctctcgcc ggctcaggtc
       61 tcggtcttca agacgctgcg caagattccg ctgggcgaga cgcgctcgta cgacgacgtc
      121 gcccgcgcga cgtcgctgca cccacgccag atcggctggc tggtcgcggc caaccacctc
      181 gcgattctga tcccctgtca ccgggtggtg ggcaaggacg gcagcctggt gggctacggc
      241 ggcggtctgg ccaagaagcg ctggctcctg gaccacgagc tccgtgccgc aggcgtggtg
      301 ctccggtaac ggccgcggga gcagccggga cccagtccgg taagccgcgg cggacgaacg
      361 gtttgcaacg gagcgccggg cccagaggcc ggccccggca accggccgct gtattgacaa
      421 ttcggaatcc gtacatgacc ttaggccatg cgtagcgtgg tctcaccttt gcgttcttga
      481 ctcatcgtca gccggtcgga cttcggtgtc cgggcggctt ttttcatggg gcttcttcac
      541 ccggccacga gggccggggg tttccccgga gcctgcgggc tcccctgtca agaggttgca
      601 acaatggcga agggcacggt caagtggttc aatgacgcaa aggggtttgg tttcatcgcg
      661 caggatggtg gcaaggacgt cttcgttcat cacaccgcga tcatcgccga aggcttccgc
      721 tcgctgtccg agggcgacaa cgtggagttc gaggtcgtcg aggggcccaa ggggctccag
      781 gcctccaacg tccgcaaggt ctgaatcccc gcgctccgcg ccttttcccg atctgacgca
      841 gagccgaact acaccgagag cccccgcttc tcaggcgggg gctcatggtg tccgcttgtc
      901 ccgcgaggtc tcccgcctca tgacgcaccg gccggtgctg gtctcgctgg tgatcgtgct
      961 gctcctcctc ttccccgcgg cggtctccgc ctctcctccc ggcctcgctg cccaggacac
     1021 gtcggcccac cgcttccgcg gcttccgggc gggtgcccgg ctcgacgaga tggacgcgct
     1081 ggtgcgccgc gcgggtggcg ggggcctgcg ctgcgaccgc gcgaaacgcg atcctcgggt
     1141 gtccgagtgc cgcggcatcg tccccgattc cgtcggcccg atgaggatct gggtttccgc
     1201 catggacagc gtggccggca tcgtcacgct ctccgcggcg gtggacagca gcgggctgag
     1261 ccgctggcgg cgcgagctcg agcgggcgta cggtcgagtc gcgccgaaag tgcagggcgg
     1321 ccagacgatg ctgcagtggg tccgtcgggg ccggatgctg cgcctcacct ggcgcagcga
     1381 gcggggggag ctcaccgcct ccgtgagcct ggtggatggc cgggtgctcg acgcctgggg
     1441 cgcggagcgg gaggcgagat cacgctagcc ggaccaggaa gctcccttcc gtgtcctcca
     1501 gcaggtaatc ccgcaccacc ctaccctcct cccgcatccg cctcaggagc gtccgcaccc
     1561 gggtcctgat cggcgcgccg cccccgctac gacctcgtcc ggtcaccacc cgaacggtcg
     1621 cacccggcct cgccctgcgc tgcgccagga ggaagtgctc cgcgctcgcg accgcctcga
     1681 gtaccgacag cccgtgcagg tcgagctgag ccgcgggctc cccatcgctc cagtctctca
     1741 tccgcctccc ccacgctaag tacgcaactt gcactccgag cctgccgtcg gcccgatcgc
     1801 cgtcgctaag ctactacagt caaatacgtt agggtctgga gctcgccttg gcatcatctc
     1861 gaccgctcag gctaattgcg ccccgcttgg ctgccgccgc cctcaccacc ctcctcctgg
     1921 cctgcgggca ggccgacggt ggtccggtgc gcatcggcgt ggcgggttcg ttcagcgatc
     1981 ccatcgggac ccccatgcag ctggccgccg agctggcggc ggcagagatc aacgccgccg
     2041 gcggcatcga cgggcggccc atcgagctgg tcctgcgcga cgactatgcc gaccccgact
     2101 ccgccgtctt cattgcgtcc gacctctacg aatctgatgt ctccgccgtc gtcggccacc
     2161 tgttctccgg cacgacgctg gccgccgccc cggtctacaa cggcggcgcc gaccccatcg
     2221 cggccatctc gccgtcctcg tcgtcgcccg aggtcaccag tgccggcgac cacaccttcc
     2281 gcatctgccc cagcgatctg gcgcacggag cggccctcgc ccactgggtc cgcgagcggc
     2341 tgggcttcga gcgcggcgcg gtgctctacc tgaacgacca gtacggccgc ggcattcgcc
     2401 agaccttcgt ggagcagttc ctcaggttgg gcggccggct cgaatcggtg gatccgtatc
     2461 tgggcgaccg ccccgacgtc gggccgtacc tcgatcgcat ggtgcgcaac cggagcatcc
     2521 agttcctggt cgtggcgggc aaccgagggg agggggagga agtcatccgc caggctcggc
     2581 gccgcgggct caccgtcccg atcctgggtg gcgacggact ggaggggatc gagggcgcgg
     2641 gggcgctggc cgagggcgtg tacctcacgt cggcctattt ccctaacctc cccaccggcg
     2701 ccaaccgcaa gttcgtggag gcctatcaac gcaagtaccc cggcgccggg atgccgaacc
     2761 agcccgctgc ggcgacctac gatgcgattt acctcctgcg ggaggtcatc gcccgggcgg
     2821 ggaccgaccg gcaggcggtg cggcgggcac tcgcgggcgt ggggtcggag acgccggcct
     2881 tcgagggcgt gaccggactg gtggccttcg atgccgcggg cgacgtgccg gatcagaatg
     2941 tgtacatcgg gaaggtgcgc gccggcgcgg tcgaggtggc ggaccgcacc gaggtcgcgc
     3001 aggggcagca gccatgatgc gcagtctccg gagccgggtg gtgggtggga tggtgctgct
     3061 catcggcctg gtgttcgtca tcgcgctgct gggcgtgagc gcgatccgct cgctcgacca
     3121 gtccgtcgag cgagagctgt cgctgctgat ggagacgacc gatctcggca acgggctgat
     3181 ctcctcggtc gcttccgagg tccggtccgc cgagcagtac ctcgtgcgtc cggcgcagga
     3241 gctgcggctc aaggtcctgg agcagggtga ttccgcctac gccctccagc gccgctatcg
     3301 cgggctggcg tcgctcacca cttccgaccg gtacatcgtc aaccagatcg ccgagaacca
     3361 ggcccagatc gaggtggcgt acgccatggc gcacgcccac accgacctgg ggcgcccgga
     3421 ggaggcgcgc cgctacgccg acctggctcg ctcgccctcc gacaccctgc tgcgtgacgt
     3481 gcgctcgctc tccctggcgc agacctctcg ctcgatggag cgcgccgccg cgct
//
LOCUS       DASUYN010000462         3920 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1247049, whole genome shotgun sequence.
ACCESSION   DASUYN010000462 DASUYN010000000
VERSION     DASUYN010000462.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3920)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3920)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3920
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1247049"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1831)
                     /locus_tag="VF061_09080"
     CDS             complement(<1..1831)
                     /locus_tag="VF061_09080"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HEX6669698.1"
                     /translation="MSAFTTEVRDSIAVVTLDLPGEPVNKLTAAVRVEFEALLIRLRD
                     DAEIKGVVLTSGKPDTFIAGADIEEFTALTTQAEAERLSFEGQEMVSRIETLPKPVVA
                     AIHGACLGGGLELALACHYRVASDHPKTQLGLPEVQLGVIPGAGGTQRLPRLIGLRAS
                     LDLILGGKSERASKALRIGLVDELVPPSILLRTATAAARRLVRDGIPERSARGGLQDY
                     FLDRTPAGRRLVYRGARAQVLKRTGGHYPAPLAALETVRVGMEHGITAGLAEEHHTFG
                     HLAVSEVSRKLVQVFFATTALKKDDGIPPGSASPRQIRRLAVVGAGFMGAGIAGTAAL
                     NVEVDTRVKDADLAKVGKGLGTATRILRDRLDRRRITRPQFERLGALLSGSDTYAGFG
                     RADLVIEAVFEELAVKRKVLAEVEAVTRSDTIFASNTSTIPIHQIAAEAMRPDRVLGM
                     HFFSPVEKMPLLEVIPTDATAPEAIVTAVRFGRRMGKTVIVVADRPGFWVNRILSPYL
                     NEAGHLLQEGVPIEVIDQVMTRFGFPVGPVALLDEVGLDVAEKAGGVMHEAFGERMKP
                     AGALSRMLGATRLGRKNGRGFYRYKQGHKSGVDPSVYPLLNVRR"
     gene            complement(1831..3123)
                     /locus_tag="VF061_09085"
     CDS             complement(1831..3123)
                     /locus_tag="VF061_09085"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003985 - acetyl-CoA C-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HEX6669699.1"
                     /translation="MQESRPGRRVAIVAGVRTPFLKSGTAFRDVTAVALARHAARELL
                     FRSGVDGREVDEVIFSQVVPSVLAPNVAREVSLLPQLLPSVPAYTLNRACASSAQAIA
                     NAADQITLGHADTILAGGVESLSDIPILHSRRFSRVLVDASRAKGFGARVAAFGRTRP
                     RDLVPVTPPIAEPSTGESMGQSAEKMAKENGISREAQDELALRSHQRAAAAGADGRLI
                     AEIAPWFGGPGMDQPVTADNGVRADTTREALAALKPVFDRRYGSVTAGNSSPLTDGAS
                     AVLLMAEQKATALGYRPLAYLRSYAVAAVDPGWQLLMGPVYAVPKALERAGIAWSDVG
                     LFEIHEAFAAQVLSNAQAWGSQAWAERLGLPGPVGEVDWDRTNVMGGSIAVGHPFAAT
                     GARLATTLAGEMRRRDVQFGLISICAQGGMGYAMVLER"
     gene            complement(3148..3690)
                     /locus_tag="VF061_09090"
     CDS             complement(3148..3690)
                     /locus_tag="VF061_09090"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX6669700.1"
                     /translation="MPPVSRITRPSTWFLWHGHRLGPGTRVLDLACGEGRHSLAAAAR
                     GARVTALDRDEARLAAARERAEAQGLSVEWITADLDDEPWPDLGGFDAVLVFNYLDRA
                     KMPRIIGLVEPGGVLMMETFLTAQRELGWGPSADDHLLRPGELARLVAPLTVVHGREV
                     IEAVDAERWRAVASVLAVRK"
     gene            3634..>3920
                     /locus_tag="VF061_09095"
     CDS             3634..>3920
                     /locus_tag="VF061_09095"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX6669701.1"
                     /translation="MTVPQKPGAGPSDPRDRGHGHGRLSSQRATLDQLAAEPADLLVI
                     GGGITGAGVARDAAMRGLRTVLVEQNDLGSGTSSRSSRLVHGGVRYLETGDL"
BASE COUNT          568 a         1420 c         1390 g          542 t
ORIGIN      
        1 tccgtcgaac attcagcaag ggatacacgc tgggatccac gcccgacttg tggccctgct
       61 tatagcggta gaagccgcga ccattcttcc ggcccagccg agtggcgccc agcatgcgac
      121 tcagggctcc tgccggcttc atccgttcac caaaggcctc atgcatgacg cccccggcct
      181 tctccgcgac gtccagtccg acttcatcga gcagcgcgac agggccgacc gggaacccga
      241 agcgggtcat gacctggtcg atcacctcga tgggcactcc ctcctgcagc aaatggccgg
      301 cttcgttgag atagggcgat aggattcgat tcacccagaa cccgggccgg tcggccacga
      361 cgatcaccgt cttgcccatc cgacgcccga accgcacggc ggtgacgatg gcttccggcg
      421 ccgtcgcgtc ggtcgggatc acctccagca gcggcatctt ctccaccggg gagaagaagt
      481 gcatgccgag cacccggtcc ggacgcatcg cctcggccgc gatctggtgg atcgggatgg
      541 tggaggtatt gctggcgaag atcgtgtccg accgcgtcac cgcctccact tccgccagca
      601 ccttccgctt caccgccagc tcctcgaaca ccgcctcgat caccaggtcg gcgcggccga
      661 agccggcata ggtatcgctg ccggagagga gcgcgccgag ccgctcgaac tgcgggcggg
      721 tgatccggcg ccgatcgagc cggtcccgga ggatcctggt cgccgtgccg agccccttcc
      781 ccaccttggc gagatccgcg tccttcaccc gggtgtccac ctcgacgttg agcgccgcgg
      841 tgccggcgat gcccgcgccc atgaacccgg cgccgacgac cgcgaggcgg cggatctgcc
      901 gcgggctcgc gctgccgggc gggatcccgt cgtccttctt gagcgcggtg gtcgcgaaga
      961 agacctgcac cagcttgcgg ctgacctcgc tcacggcgag atggccgaag gtgtggtgct
     1021 cctccgccag ccccgcggtg atcccatgtt ccatgcccac gcgcaccgtc tccagcgccg
     1081 ccagcggcgc gggatagtgc ccgccggtgc gcttcagcac ctgcgccctc gccccgcgat
     1141 acaccaggcg ccgtcccgcc ggggtgcgat ccaggaagta gtcctgcagc ccgccccggg
     1201 cgctgcgctc gggaataccg tcgcgcacca ggcgacgcgc ggcggcggtc gcggtccgga
     1261 gcaggatgct cggcggcacc agctcgtcca ccaggccgat ccggagcgcc ttggacgcgc
     1321 gctcgctctt gccgccgagg atcaggtcga gggaggcgcg cagcccgatc agccgcggca
     1381 gccgctgggt gccgcccgcg ccgggaatga cgccgagctg cacctcggga aggcccagct
     1441 gggtcttggg atggtcgctg gcgacgcggt agtggcaggc gagcgccagc tccagcccgc
     1501 cgcccaggca ggcgccgtgg atcgcggcga ccaccggctt cggcagggtc tcgatccggc
     1561 tcaccatctc ctgcccctcg aagctcagcc gctccgcttc cgcctgggtg gtcagggcgg
     1621 tgaactcctc gatgtcggcg cccgcgatga acgtgtcggg cttgccggag gtcagcacca
     1681 cacccttgat ctcggcgtcg tcgcgcaggc ggatgagcag cgcctcgaac tcgacccgca
     1741 ccgccgcggt gagcttgttg accggctcgc cggggaggtc gagggtgacc accgcgatgg
     1801 agtcccggac ctcggtggtg aaggccgaca ctagcgctcc aggaccatgg cgtagcccat
     1861 cccgccctgg gcgcagatgg agatcagccc gaactgcacg tcgcgccggc gcatttcgcc
     1921 ggcgagcgtg gtggccaggc gtgcaccggt cgcggcgaac gggtggccga ccgcgatgga
     1981 gccgcccatc acgttggtcc gatcccagtc cacctcaccc accgggccgg ggagacccag
     2041 ccgctcggcc caggcctgcg agccccaggc ctgcgcgttg gagagcacct gggcggcgaa
     2101 ggcctcgtgg atctcgaaga gccccacgtc gctccacgcg atgcccgcgc gctccagcgc
     2161 cttgggcacc gcgtagaccg gccccatgag gagctgccag ccgggatcca ccgcggcgac
     2221 ggcgtagctg cgcaggtagg cgagggggcg atagccgagc gcggtggcct tctgctcggc
     2281 catcagcagg accgcggagg cgccgtcggt gagcggagac gagttgccgg cggtgaccga
     2341 gccgtagcgg cggtcgaaga cgggcttcag ggccgcgagc gcctcacggg tggtgtcggc
     2401 gcggacgccg ttgtccgccg tgacgggctg gtccataccg ggaccaccga accagggcgc
     2461 gatctccgcg atgagccggc cgtccgcgcc ggcggcggcg gcccgctggt ggctgcggag
     2521 cgcgagctcg tcctgcgcct cgcggctgat cccgttctcc ttcgccatct tctcggccga
     2581 ctggcccatc gactcgccgg tggagggctc ggcgatcggc ggcgtcaccg ggaccaggtc
     2641 gcgcggccgg gtgcgtccga acgcggcgac ccgagcgccg aagcctttgg cccggctcgc
     2701 gtccaccagt acccggctga agcggcggga gtggaggatg ggaatgtcgg agagcgactc
     2761 caccccgccc gcgaggatcg tgtcggcgtg cccgagggtg atctggtcgg ccgcgttggc
     2821 gatggcctgg gcgctggagg cgcaggcacg gttcagggtg tacgccggga cgctggggag
     2881 gagctgcggg agaagactca cttcgcgcgc gacgttgggc gcgaggaccg acgggaccac
     2941 ctggctgaag atcacctcgt ccacttcccg cccgtccacc ccgctccgga agagcagctc
     3001 gcgcgcggcg tgccgagcca gtgccacggc ggtgacgtcc cgaaaggcgg tgccgctctt
     3061 gaggaacggc gtgcgcacgc ccgcgacgat ggcgacccgt cgaccgggtc gggactcttg
     3121 catgttgctc cgcgcgagag ggaggagtta cttcctaacc gccaggacgc tcgccaccgc
     3181 ccgccaccgc tcggcgtcca ccgcctcgat cacctcgcgg ccgtgcacca ccgtgagggg
     3241 ggcgaccagc cgggccagct cgccggggcg gagcaggtgg tcgtccgcgg aagggcccca
     3301 gccgagctcc cgctgggcgg tgaggaacgt ctccatcatc agcacgccgc ccggctcgac
     3361 caatccgatg atccgcggca tcttggcccg gtcaagataa ttgaacacga gaaccgcatc
     3421 aaaaccgccg aggtcgggcc acggctcgtc gtcgaggtcg gccgtgatcc actcgaccga
     3481 gaggccctgg gcctcggccc gctcccgcgc ggcggcgagc cgcgcctcgt cgcggtccag
     3541 ggccgtgacc cgcgcgccgc gcgccgccgc ggccaggctg tggcgaccct cgccgcaggc
     3601 cagatccagg acccgggtgc cggggcccag tcgatgaccg tgccacagaa accaggtgct
     3661 gggccgagtg atccgcgaga cagggggcat ggtcacgggc gactgtcctc acagcgggcg
     3721 acactcgatc agctggccgc ggagccggcc gacctgctgg tgatcggcgg cggcatcacc
     3781 ggcgccggcg tggcccgcga cgccgcgatg cgcggactcc gcacggtcct ggtggagcag
     3841 aacgacctcg gctcgggcac gagctcgcgc tccagccgcc tggttcacgg cggcgtgcgc
     3901 tacctggaga cgggagatct
//
LOCUS       DASUYN010000463         2197 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_584576, whole genome shotgun sequence.
ACCESSION   DASUYN010000463 DASUYN010000000
VERSION     DASUYN010000463.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2197)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2197)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2197
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_584576"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1085
                     /locus_tag="VF061_09100"
     CDS             <1..1085
                     /locus_tag="VF061_09100"
                     /inference="COORDINATES: protein motif:HMM:TIGR01777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TIGR01777 family oxidoreductase"
                     /protein_id="HEX6669702.1"
                     /translation="ADATRYTDRIEFGPPFGTLGAAGGRWLARPRTERMLAYRHATLR
                     DDLAAHARFRGHPPLRVAVTGASGLLGSALLPFLTTGGHEVTAVSRRRARAGTVHWDP
                     AVGVIDHAGLEGMDAVVHLAGENVGHHWNQHRKRRIRDSRVEGTMLLAEALATLKRPP
                     RVLVSASAMGIYGDRGDEVLAEDALPEGPPSDFFVELGRDWEGATEPARAAGIRVVNL
                     RFGLVLTPAGGALGRMLPPFLLGVGGPLGSGRQWVSWLSVDDAVGTVHHALLTEELEG
                     PVNAAAPDPVTSRTFAVTLGRVLRRPAVLPVPAPALKLLFGEMADTALLAGQRLSSAR
                     LLGSGYSFRHPTLELALRHVLGRGEH"
     gene            1115..1807
                     /gene="queC"
                     /locus_tag="VF061_09105"
     CDS             1115..1807
                     /gene="queC"
                     /locus_tag="VF061_09105"
                     /EC_number="6.3.4.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HEX6669703.1"
                     /translation="MTAPRAVVLLSGGMDSATAGAVARDQGFELFGLSFRYGQRHAAE
                     LEAATRVASWLGVRRHVVLEIDLRAFGGSALTGDLAVPKDTPLERIGDAIPATYVPAR
                     NTIFLSFAMGWAEVLEAADIFIGANALDYSGYPDCRPEYIEAFERMANLATRAGVEGR
                     RLRIHTPLIGLGKAEIVKLGQRLGVDYGMTWSCYDPTPDGTPCGHCDACLLRAKGFRE
                     AGVEDPALARRA"
     gene            1812..>2197
                     /locus_tag="VF061_09110"
     CDS             1812..>2197
                     /locus_tag="VF061_09110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase"
                     /protein_id="HEX6669704.1"
                     /translation="MPYAVKEIFYTLQGEGANTGRPAVFCRFAGCNLWTGREADRASA
                     ICRFCDTDFVGTDGPGGGRFPDATALARAVAGAWPDGGTGRPFVVCTGGEPLLQLDPA
                     LLDALHAVGFEVAVETNGTVEPPAGI"
BASE COUNT          288 a          793 c          807 g          309 t
ORIGIN      
        1 cagccgacgc cacccggtac accgaccgca tcgagttcgg acccccgttc ggcaccctcg
       61 gcgcggcggg cgggcgctgg ctggcgcgcc ctcgcaccga gcggatgctg gcgtaccgcc
      121 acgccaccct gcgtgacgat ctcgccgcgc acgcgcgctt ccgggggcac ccgccgctgc
      181 gggtggcggt caccggcgct agcgggctgc tcggctctgc cctgctgccg ttcctcacca
      241 cgggtgggca cgaggtcacg gcggtcagca ggcggcgggc ccgggcgggc acggtgcact
      301 gggatccggc ggtcggcgtg atcgatcatg ccggactcga gggcatggac gcggtggtcc
      361 acctcgcggg tgaaaacgtc ggccaccact ggaaccagca ccgcaagcgg aggatccggg
      421 acagccgggt ggaagggacg atgctcctcg cggaggcgct ggcgaccctg aagcggccgc
      481 cgcgggtgct ggtctccgcc tccgcgatgg ggatctacgg cgaccgcggc gacgaggtgc
      541 tggccgagga tgcgctgccc gaggggccac cgagcgactt cttcgtcgag ctggggcgag
      601 attgggaggg ggccaccgag cccgcccgcg cggccggcat ccgggtggtg aacctccggt
      661 tcggcctcgt cctcacgccg gcgggcggag cgctcggacg gatgctgccg ccgttcctcc
      721 tgggcgtggg cggccctctg ggaagcggga ggcaatgggt gagctggctg tcggtagatg
      781 atgccgtggg gacggtccac cacgcgctcc tcaccgagga gctcgaggga ccggtgaacg
      841 ccgcggcacc ggacccggtg accagtcgca ccttcgcggt gacattgggg cgcgtcctca
      901 ggcggccggc ggtcctccct gtccctgccc cggcgctcaa gctcctcttc ggcgagatgg
      961 ccgacacggc cctcctcgcg ggccagcggc tctcctccgc ccgtctgctg ggctcaggct
     1021 actccttccg gcatccgacc ctggagctcg cgctcaggca cgtcctcggg cggggcgagc
     1081 actgattcgg gacgccggca gtagctttcc cggtatgacc gcacccaggg ccgtggtcct
     1141 cctcagcggc ggaatggatt ccgccaccgc cggcgccgtc gcccgcgacc agggcttcga
     1201 gcttttcggg ctcagctttc gctacggcca gcggcatgcg gccgagctgg aggcggccac
     1261 gcgggtggcg tcatggctcg gcgtccggcg ccacgtggtg ctggagatcg acctccgcgc
     1321 cttcggcggc tccgccctca ccggcgacct cgccgtcccc aaggacaccc cgctcgagcg
     1381 catcggcgac gccatccccg cgacctacgt ccccgcgcgc aacaccatct tcctctcctt
     1441 cgcgatgggc tgggccgaag tcctggaggc cgccgacatc ttcatcggcg cgaacgcgct
     1501 ggactacagc ggctaccccg actgccgacc cgagtacatc gaggccttcg agcggatggc
     1561 gaacctcgcc acccgcgccg gcgtggaggg ccgccggctg cggatccaca cgccgctgat
     1621 cggcctcggc aaggccgaga tcgtgaagct ggggcagcgg ctgggcgtgg actacgggat
     1681 gacctggagc tgctacgacc cgacgccgga cggaacgcca tgcggacact gcgacgcgtg
     1741 cctcctcagg gcgaaggggt tccgggaggc gggggtggag gatccggcac tggctcgcag
     1801 ggcgtaagca gatgccgtac gcggtcaagg aaatcttcta caccctccag ggcgaaggcg
     1861 ccaacaccgg caggccggcg gtattctgcc gcttcgcggg ctgcaacctg tggaccggcc
     1921 gtgaggccga ccgcgcgtcc gccatctgcc gcttctgcga cacggacttc gtcggcaccg
     1981 acggtccggg tgggggcagg ttccccgatg ccacggcgct cgcgcgggcg gtggccgggg
     2041 cctggcccga cggcggcacg ggacggccgt tcgtggtctg caccggcggg gagcccctgc
     2101 tccagctcga tcctgccctg ctcgacgccc tacacgcggt gggcttcgag gtggcggtgg
     2161 agaccaacgg cacggtcgag ccgccggcgg gcatcga
//
LOCUS       DASUYN010000464         2764 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1028412, whole genome shotgun sequence.
ACCESSION   DASUYN010000464 DASUYN010000000
VERSION     DASUYN010000464.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2764)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2764)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2764
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1028412"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            25..1503
                     /locus_tag="VF061_09115"
     CDS             25..1503
                     /locus_tag="VF061_09115"
                     /EC_number="2.4.1.21"
                     /inference="COORDINATES: protein motif:HMM:TIGR02095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004373 - glycogen (starch) synthase
                     activity [Evidence IEA];
                     GO_function: GO:0009011 - starch synthase activity
                     [Evidence IEA];
                     GO_process: GO:0005978 - glycogen biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen synthase"
                     /protein_id="HEX6669705.1"
                     /translation="MAELMSAGGGEPISIVHVTAEYFPYARTGGLAEAVAGLANFQHA
                     GGLGVTAILPLYRTVRDEDPDLEPVGQPFVVSLGGRNEEARVFRAVGPVAGPQVYFIE
                     HLEYFNRHGIYGENGADYPDNYRRFAFFALAACQALPRLVKGPFLLHTHDWHTALAPV
                     YLRTSVAQERHARTAATVVSVHNPGYQGHFGPEVMPEIGLPWALYNWQQLEWYGKVNF
                     LKGGLSFADMVTTVSPTQARELRTPGGGFGLHDLFIALGERLVGVLNGIDQRVWNPAA
                     DTQITAQYSADKLEGKRKCKAALQRTFGLPQRRRVPLFGMTGRLVTQKGLDLILGASE
                     LLGSDAQFVFLGSGDPRYERALVDLATSAPNRIGVQLDFTDRLEHRLMAGADIFLMPS
                     LYEPCGLTQMRAQRYGAPPVVRRVGGLADTVEDGVTGFVFDGYSPEAFQEAGLRALRG
                     YAEAAKWQAMVRRAMARDFSWERSVDQYLEVYRRAVAQAAMR"
     gene            1511..>2764
                     /locus_tag="VF061_09120"
     CDS             1511..>2764
                     /locus_tag="VF061_09120"
                     /inference="COORDINATES: protein motif:HMM:NF015052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669706.1"
                     /translation="MDFVLALHSHLPWVLNHGRWPHGSDWLCEAALDAYLPLIERLRA
                     LEAERIPAPLTLGITPVLANQLASPAFVAEMEAFFAQRLLACDEARTSLTASGEGHLV
                     PLVEFWHERLRRLQHLFHDLGGDLLSALRALEDAGRIETITSAATHGFLPLLARDESI
                     RLQLAAGRTEHRRLLGRHPQGIWVPECAYRPRGPWQPWSTAPRVGIRRGIEEHLGDAG
                     FRYFFVDSHLASAGRPLGIYGDPGGDPLLPRSGDRLEDLGHRSPYRAYEVAPWRHEGI
                     AALVRDPRSSMQVWSRHHGYPGDGTYLEFHKMRWPGGLKLWRVTGDGVDLGGKEPYDP
                     AAARERARGHAEHFTGLLDAIAGGERQRRNGVIVAPFDTELFGHWWFEGPEWLAAVYR
                     SLARQGHGVRPVTASRHLADHPARQP"
BASE COUNT          371 a         1054 c          937 g          402 t
ORIGIN      
        1 ccgcccacgg gctgaggcga tacgatggcc gagctgatga gcgcgggcgg cggcgagccg
       61 atctccatcg tccacgtgac cgcggagtac ttcccctacg cacgaaccgg tgggctggcc
      121 gaggcggtgg ccggcctggc caacttccag cacgccggcg gcctcggtgt cacggccatc
      181 cttccgctgt accgcaccgt gcgcgacgag gaccccgacc tcgagcccgt cggtcagccg
      241 ttcgtggtga gcctcggcgg ccgcaacgag gaggcgcgcg tgttccgcgc cgtcggccca
      301 gtcgccggcc cgcaggtcta cttcatcgag cacctggagt acttcaaccg gcacggcatc
      361 tacggcgaga acggggccga ttaccccgac aactaccggc gcttcgcctt cttcgctctc
      421 gccgcgtgcc aggcgcttcc ccgcctcgtc aagggaccgt tcctgctgca cacccacgac
      481 tggcacacgg cgctggcgcc ggtatacctg cgcacctccg tcgcgcagga gcgccacgcg
      541 cgaaccgcgg ccaccgtcgt gtcggtgcac aatcccggct accagggtca cttcgggccc
      601 gaggtgatgc ccgagatcgg tctgccctgg gcgctctata actggcagca gctcgagtgg
      661 tacgggaagg tgaacttcct caagggcggg ctcagcttcg ccgacatggt gaccacggtg
      721 agcccgaccc aggcgaggga gctccggaca cccggcggcg gcttcggcct gcacgatctc
      781 ttcatcgcgc tgggcgagcg gctggtcggc gtgctgaacg ggatcgacca gcgggtctgg
      841 aaccccgcgg ccgacaccca gatcaccgcc cagtactccg ccgacaagct cgagggcaag
      901 cggaagtgca aggcggcgct ccagcgcacc ttcggcctgc cgcagcgccg ccgcgtgccc
      961 ctcttcggga tgaccgggcg gctggtgacc cagaaggggc tcgatctcat tctcggtgcc
     1021 agcgagctcc tcggcagcga cgcgcagttc gtctttctgg gcagcgggga cccccgctac
     1081 gagcgcgccc tcgtggacct ggccacctcg gcgcccaacc gcatcggggt gcagctcgac
     1141 ttcaccgacc gcctggagca ccggctcatg gcgggtgccg acatcttcct catgccctcc
     1201 ctctacgagc cctgcggcct gacccagatg cgcgcccagc gctacggcgc cccgcccgtc
     1261 gtccgccggg tgggcggcct ggccgacacc gtggaggacg gcgtcaccgg attcgtcttc
     1321 gacggctact cgcccgaggc gttccaagag gccggcctcc gcgccctccg gggctacgcc
     1381 gaggcggcca agtggcaggc catggtccgg cgtgcgatgg cgcgcgactt cagctgggag
     1441 cgctcggtgg accagtacct cgaggtttac cgccgggccg tcgcccaggc cgcgatgcgc
     1501 taggccgacg atggacttcg tcctcgccct gcacagccat ctgccctggg tgctcaatca
     1561 cggccgctgg ccgcacggca gcgactggct ctgcgaggcc gcgctcgacg cctacctccc
     1621 gctgatcgag cggcttcggg cgctggaggc ggagcggatc ccggcgccgc tcacactcgg
     1681 catcacgccg gtgctcgcca atcagctcgc cagcccggcc ttcgtcgcgg agatggaggc
     1741 attcttcgcc cagcgccttc tcgcctgcga cgaggcccgg acctcgctca ctgcctcggg
     1801 cgagggtcat ctcgtcccgc tggtcgagtt ctggcacgag cggctgcggc ggctgcagca
     1861 cctcttccac gacctcggcg gcgacctcct gtcggcgctc cgggcactgg aggacgccgg
     1921 acggatcgag accatcacct ccgccgcgac tcacgggttc ctcccgctcc tcgcgcggga
     1981 cgagagcatc cggctgcagc tcgcggccgg ccgcaccgag caccgtcggc tgctcgggcg
     2041 acatccccag ggcatctggg taccggagtg cgcctaccgg ccccgcggtc cgtggcagcc
     2101 ctggagcacc gccccgcggg tggggatccg ccgcgggatc gaggagcatc tcggcgatgc
     2161 cggcttccgc tacttcttcg tggactccca cctcgcctcg gccggccggc cgctgggcat
     2221 ctatggcgac ccgggcggcg atccgctgct gccgcgctcc ggcgaccggc tcgaggacct
     2281 cggccaccgc tcgccctacc gggcctacga ggtggcgccc tggcggcacg agggcatcgc
     2341 cgccctggta cgcgatccgc gctcgtccat gcaggtatgg agccgccatc acggctatcc
     2401 cggcgacggc acctacctcg agttccacaa gatgcgctgg cccggcggcc tcaagctctg
     2461 gcgggtgacc ggcgacggcg tggacctcgg cgggaaggag ccctacgatc cggccgccgc
     2521 acgggagcgc gcccggggac atgccgagca cttcaccgga ctcctcgacg ccatcgccgg
     2581 gggcgagcgc cagcgccgca acggcgtcat cgtggcgccg ttcgacaccg agctcttcgg
     2641 ccactggtgg ttcgagggac ccgagtggct ggcggccgtg taccgctcgc tggcgcgcca
     2701 gggccacggg gtccggccgg tcacggcctc gcgccatctc gccgaccacc cggcgcgcca
     2761 gccg
//
LOCUS       DASUYN010000465         2246 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1689250, whole genome shotgun sequence.
ACCESSION   DASUYN010000465 DASUYN010000000
VERSION     DASUYN010000465.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2246
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1689250"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1749)
                     /locus_tag="VF061_09125"
     CDS             complement(<1..1749)
                     /locus_tag="VF061_09125"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX6669707.1"
                     /translation="MSGLARPPFVGRTEELSLLREGLVSATGSRPGCIAVTGDAGVGK
                     TRLLAEFAVLARAEGARVVVGAGIDLAADEFPFGVFLSAFRDLARWQRRDPQRDQSGT
                     SYDEVLALLHTHTSVVAGAERTGRSQLFDRVLDLLGELSDELPLVLILEDLHWADRTS
                     LDLLKFLVQDLCQERDLLRDLPRERILLVLSWRSDEVVDGSSRWDALADLERLRCIET
                     VRLGALDQAELSTMLRAVTSAPLTTAQTEEIARRSAGNPLFAQELLAAGPRSAGRSAP
                     VSCREVVLRRARRLSPAAGVAVRALAVIGRPADHALLAEVSELPPDELAAGLREGLDQ
                     RLLRREGDGDLYAFRHPLGQEAVYDDILPGERLVLHGRTAGALDRLTAATESSGFVGA
                     ELAHHWHKAQVWARALPAAVAAARAAAGVTGFAEAYAQYQQALDAWAHLPDDATLDCT
                     LAELQEEAAEAAHWVGATAEAVALATAAREAARSRGDVHAEARANERLGRYLWELGDP
                     VAGLAADRDAVRLLAGEPPSRLQARARAALAAGLLLDGESAAAAEEATAAVGLARTAD
                     SPAEESYALTTLGVCRA"
BASE COUNT          334 a          825 c          811 g          276 t
ORIGIN      
        1 ggcccggcaa acccccagcg tcgtcagtgc gtagctctcc tcagcggggc tgtccgccgt
       61 gcgggccagt cccacagccg cggtcgcctc ctccgccgcg gcggcggact cgccgtccag
      121 gagcaggccc gccgcgagcg cggccctggc ccgggcctgc aatcggctcg gcggttcgcc
      181 ggcgagcagc cgcacggcgt cgcggtcggc cgcgagcccg gccaccggat ctcccagctc
      241 ccacaggtag cggcccagcc gctcgttggc ccgcgcctcg gcgtgcacgt cacctcggga
      301 tcgggccgcc tcgcgggccg ctgtcgcgag ggcgacagcc tccgccgtgg cgccaaccca
      361 gtgggccgcc tccgcggcct cttcctgcag ctcggcgagt gtgcagtcga gggtggcgtc
      421 atcggggagg tgggcccacg cgtcgagcgc ctgctggtat tgcgcgtacg cctcggcgaa
      481 cccggtgacg ccggccgcgg cccgagcagc ggccaccgcg gcgggcaacg cccgcgccca
      541 cacctgggcc ttgtgccagt ggtgggccag ctcggcgccg acgaagccag aactctctgt
      601 ggcggcggtc aggcgatcca gggcaccggc ggtgcggcca tgcaggacga gccgctcacc
      661 ggggaggatg tcgtcgtaca cggcttcttg acccagcggg tgtcggaagg cgtacagatc
      721 tccgtcgcct tccctgcgca gcagccgctg gtccaggccc tcccgcagac ccgccgcgag
      781 ctcgtcgggc ggcagctcgg agacctcggc caggagtgca tggtcggccg ggcggccgat
      841 cacggcgagc gcgcgcacgg cgactcccgc cgccggcgag agccgtcgcg cgcggcgcag
      901 caccacttcc cgacaggaca ccggggcgga gcgccccgcc gagcggggac cggccgcaag
      961 cagttcctgc gcgaacagag ggtttccggc ggagcgccgg gcaatctcct cggtctgggc
     1021 ggtcgtgagc ggagcgctgg tcaccgccct gagcatcgtc gagagctcgg cctggtccag
     1081 agcgcccagc cggacggtct cgatgcagcg cagccgttcg aggtcggcaa gggcgtccca
     1141 ccgggagctg ccgtcgacga cctcgtccga ccgccacgac agcacgagca gaatgcgttc
     1201 gcgcgggagg tcgcggagca ggtcccgctc ctgacagagg tcctgtacca ggaacttcag
     1261 caggtccaag ctggtccggt cggcccagtg caggtcctcg agaatcagca ccagaggcag
     1321 ctcgtcactg agctcgccca acaggtccaa cacccggtcg aagagctggc tgcggcccgt
     1381 gcgctcggca cccgcgacga cggacgtgtg ggtgtgcagc agcgcgagca cctcgtcgta
     1441 cgacgtgccc gactgatccc gctgggggtc gcggcgctgc cagcgggcga ggtcgcgaaa
     1501 cgccgaaagg aagaccccga acgggaactc gtcggcggcc aggtcgatgc ccgcccccac
     1561 gaccacgcgg gcgccctcgg cccgggccag gacggcgaac tccgcgagca gccgggtctt
     1621 gccgaccccg gcgtcaccgg tgaccgcgat gcagcctggg cgactcccgg tggcggagac
     1681 gagaccctcg cggagcaggg acaactcttc ggtccggccg acgaagggag gccgtgcgag
     1741 gccgctcatg cccgccagtg tcgtcccacc ggagcccgct gcccagcggc ttccggtggg
     1801 cccggctgcc ggtcaacctg gagaggccgg gacgtgggtg acacggaata cggggatctg
     1861 cgcggcaatg cggtcgaaat cctccagcgg ggcgtgccgg tccaccggca cataggcccg
     1921 agctcccgga gcgcagtcca ggtagcgcct caggatgggc gcgcgggcgc cgggtgcgac
     1981 ctcttccagt cgtacgacct cggcggccgt gccgcagcaa cagtcgtgcc aggcggttcg
     2041 ggcgcccacc tcggtacagc cagcgatcga acctgtggag gcgcgccgac cccgctgcgt
     2101 tgccgcgagg tctcatgacg ctcacgatga aacaagccgc acgggccgac cacggccgaa
     2161 ggtcactcag cccgtaggcg atcgactggc gcgcccgaag ggattcgaac ctccaacctt
     2221 ctgaaccgta gtaagaacgg cacgca
//
LOCUS       DASUYN010000466         2501 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1249679, whole genome shotgun sequence.
ACCESSION   DASUYN010000466 DASUYN010000000
VERSION     DASUYN010000466.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2501)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2501)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2501
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1249679"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            316..1500
                     /gene="istA"
                     /locus_tag="VF061_09130"
     CDS             316..1500
                     /gene="istA"
                     /locus_tag="VF061_09130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000952428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HEX6669708.1"
                     /translation="MLGLEDFMTIQALVRRGVYLCDIAEQLGVHPRTVRRALQRGGPP
                     ARRGGRRGSRLDPFRPVVDQLLADGVWNAVVVWRELQAKGYAGGISILRDYLHPKRAL
                     RPGRATVRFETEPGRQLQSDWATHRTMIAGQATAVHFVVNTLSFSRRFHFWCTETEDA
                     EHTYDGLVRAFEWFGGAPAEVLVDNQKCAVLAHPRGGAVRFHPRFVDLAGHYGFVPRA
                     CRPARAQTKGKDERNVGYIKHHFFVRYRAFESWTHLNQVAEQWLREEADQRVHGTVHE
                     VVAERFAREAPTLRPLPARRYDTAYWERRQVGWDAYVEVRGNRYSVPAELAGRLVTVR
                     LSLEGQLGIYDDEQLVAQHVLQPADRGWVTVPGHHATLWARTLNVERRPLAVYEEAGT
                     WN"
     gene            1491..2276
                     /gene="istB"
                     /locus_tag="VF061_09135"
     CDS             1491..2276
                     /gene="istB"
                     /locus_tag="VF061_09135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000544830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element helper ATPase IstB"
                     /protein_id="HEX6669709.1"
                     /translation="MELTSLLERMKMEHLLAQLDGVCEQAAKGDVDYKGFLTQALEAE
                     WRGRHQRGVESRLKLARFPWLKSLEQFDFDFQPSIDRKMLRELAGLSFVERTENVVLL
                     GPPGVGKTHLAIALGVKAVEAGYSVLFLTLETLMGRLVRARHENRLDRTLHQLVYPRV
                     LILDELGYLPLTREEASLFFRLLVRRYERASLIVTSNKSFADWGEVFNDQVLATAILD
                     RLLHHATTVNIKGDSYRLREKKQAGLLGRRPKPADAEEAPAPA"
BASE COUNT          397 a          838 c          888 g          378 t
ORIGIN      
        1 ggtccacccg acccggacga gcctccatca ggccctgagc gaggggcaga cccacccgtc
       61 cgcctgtgca accgagatac cgggagcgag gccgtgtcgt tgcaacatga aagtgtcatc
      121 cccatctgcc acgtgaaggt gtcacccccc cttgggggtg cgggtacgtc ggcgcgcgcg
      181 tttccgagcc gcgaacccgc gtcgccaggg tgtcagcgcc tgtgatagaa gtccagagaa
      241 caccgaaata ggaagtcccc caaccaccag cgagaatgtc cctccaccga tggggccatc
      301 ggggaggagg ggcacatgct gggactggag gacttcatga cgattcaagc actggtcagg
      361 cgaggtgtct atctctgtga catcgctgag cagctggggg tgcatccccg gacggtccgg
      421 cgggcgctcc agcgtggggg accgccggcg cgccgcggcg gccgccgggg cagccggctg
      481 gatccctttc ggccggtcgt cgatcagctg ctggccgacg gggtctggaa cgcggtggtg
      541 gtctggcggg agctccaggc gaaggggtac gccgggggga tttccattct gcgcgactac
      601 cttcacccca agcgcgcgct gcggcccggt cgggcgacgg tccgcttcga gacggagccc
      661 gggcgtcagc tccagagcga ttgggcgacc caccggacga tgatcgccgg ccaggcgacg
      721 gcggttcact tcgtcgtgaa cacgctgagc ttctcccgcc gcttccactt ctggtgtacg
      781 gagaccgagg acgccgagca cacctatgac gggctcgtcc gcgccttcga gtggttcggc
      841 ggcgcccccg cggaggtcct ggtcgataac cagaagtgtg cggtgctcgc gcacccccgc
      901 gggggcgcgg tccgcttcca tccgcgcttc gtggatctgg ccgggcacta cggcttcgtg
      961 ccgcgggcct gtcggccggc gcgggcgcag accaagggga aggacgagcg gaacgtcggc
     1021 tacatcaaac accacttctt cgtccgctac cgcgccttcg agagttggac ccatttgaac
     1081 caggtggccg agcagtggct gcgggaggag gcggaccaac gggtccacgg gaccgtccac
     1141 gaagtggtgg ccgagcgatt cgcccgcgaa gcgccgaccc tccggccgct gccggcccgg
     1201 cgctacgaca cggcctactg ggagcgccgg caggtgggct gggatgccta tgtcgaggtc
     1261 cgcggcaatc gctacagtgt cccggccgag ctggccgggc gcctggtcac cgtccgcctg
     1321 tccctggagg gtcagctcgg catctatgac gacgagcagc tcgtggcgca gcacgtcctc
     1381 caaccggccg accgcggctg ggtcaccgtg cccgggcatc atgcgaccct ctgggcgcgg
     1441 acgctcaacg tcgagcgccg tccgctggcg gtgtacgagg aggccggcac atggaactga
     1501 cgagcctcct cgaacggatg aagatggagc acctcctcgc ccagctcgac ggcgtctgcg
     1561 agcaggcggc caagggcgat gtcgactaca aggggtttct gacccaggcg ctcgaggccg
     1621 aatggcgcgg gcgccaccag cgcggggtcg agagccgcct gaagctggcg cgcttcccct
     1681 ggctgaagag cctcgagcaa ttcgacttcg acttccagcc gtccatcgac cgcaagatgc
     1741 tgcgcgagct ggcggggctc agcttcgtgg agcggaccga gaacgtcgtc ctcctcgggc
     1801 cgcccggggt cgggaagacc cacttggcca ttgccctggg cgtcaaggcg gtcgaggcgg
     1861 gctactcggt gctcttcctg accctggaaa cgctgatggg ccgcttggtc cgcgctcggc
     1921 atgagaatcg gctggaccgc accctccatc agctcgtcta tccccgggtg ctcatcctag
     1981 acgagctcgg ctacctcccg ctgacccgtg aggaggccag tctcttcttc cggctgctgg
     2041 tccgccgcta cgagcgagcc agcctgatcg tgaccagcaa caagagcttc gcggattggg
     2101 gcgaggtctt caacgaccag gtcctggcca cggcgatcct cgaccgcctg cttcatcacg
     2161 ccacgaccgt caacatcaag ggagacagct atcggctccg cgaaaagaag caggcggggc
     2221 tgctgggccg gcggcccaag ccggccgacg ccgaggaggc gccggccccg gcatgacagc
     2281 cgaccggaca cggacgtcgg tgaacagggg acatctgact tcggtgtttt caggacaact
     2341 cacttcggcc ttgacaaggg atgtggttgg gcccgccggc cgagagcgtg ggcgagctcg
     2401 gtcagcgcgg tgagcggcga cggagggcga cgggggtggc ccgccgcggc ggcgggccgg
     2461 gcagcgcggc ggcgttgccg atcctgggcc ccggagtccg c
//
LOCUS       DASUYN010000467         6831 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1470643, whole genome shotgun sequence.
ACCESSION   DASUYN010000467 DASUYN010000000
VERSION     DASUYN010000467.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6831)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6831)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6831
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1470643"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            78..905
                     /locus_tag="VF061_09140"
     CDS             78..905
                     /locus_tag="VF061_09140"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEX6669710.1"
                     /translation="MQLRHIVVATDESEAGRSAVRAGLDLAVRASARLTVMRVVPVET
                     KPLFGATALERLERWLQAELQDGHAVRVELGIASGLPGIEICRFAEQRGADLLVLGRK
                     HRSAVARLLVGDTADAVIRRSRTPCLFVEQESLKLSRVLVALDGSERGMRVFGAARSF
                     AEAVGATIAVVTVEDVHAPNLPDPVPPLPLTRSSRLWRELEPHHGRGGLSTATETAVS
                     IRQGKVVPEILAEVAERSADVLAFGCHRGGPSGILETGGTGRHLAHTAPVSVLTIPL"
     gene            960..1733
                     /locus_tag="VF061_09145"
     CDS             960..1733
                     /locus_tag="VF061_09145"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX6669711.1"
                     /translation="MTNEQSGGAPVAIAPAPDSRRPRTGTVLEGIALSKVYRMGEVEV
                     HALRGVDLRLIAGEFLVLLGPSGSGKSTLLNILGGLDVPTGGRVFYRDRELTTADESE
                     LTRYRRHHVGFVFQFYNLIPSLTARENVALVTDIARRPFQPEEVLELVGLGDRLDHFP
                     AQLSGGEQQRVAIARAVAKRPDVLLCDEPTGALDCHTGRIVLEALVKVNREIGTTTAV
                     ITHNAAIAAIGDRVVTLGDGRIVREERHAAKASVESVRW"
     gene            1727..4096
                     /locus_tag="VF061_09150"
     CDS             1727..4096
                     /locus_tag="VF061_09150"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX6669712.1"
                     /translation="MVSALNRKLLRDLGQLRGQVVTVALVVACGIAGYVAFQSTWDSL
                     EHSRSAYYEHYRFADAFVHLKRAPEWVAGRLEAIPGVARVYPRLVQTITLPISGPVQP
                     PIGQIVSLPAGRQPPLNRLVLEGGRLPEPGADREAVLLTAFARRHGLAPGDALPAVVN
                     GTLRELRIVGLASSPEFVYPMPPGGGTFADDERFAVLWMDRSVIAPAFQMEGAFNDAV
                     LRLQPGAFVTGVLREIDAILEPYGGYTAVAQDRQESNYIVLEEMAQLRAWATVVPLIF
                     LSVSAFLVNVVLSRLVGLQRPEIATLKAVGYTNREIGLHFLGLVSSFVLLGAVLGFGL
                     GAWLGRSLTGLYTEVFHFPVFSYRVSAGTMLIGAAVSLLSAAAGAAAAVRGVVRLAPA
                     EAMRPPSPAVYRPLLSERIGLHHFISHAGRMILRELERRPLRTVASSVGIAASMAILV
                     VGRIGEDAIGEVLDVQFQRAWREDLNVGFRDAMPQRVVGELAHLPGVIRAEGMRYLAA
                     RAVVGTRSRDVAVLAYPDGSELQRVVDRRGRVVALPEEGALLSEQLGLILGAGPGDLI
                     ALKMLEGERRTYPVRVGGLVTDIAGLQVYLRRTALEGMLGEPPTVTTVLLSVEAGRRR
                     AVERRLNDMPQVASISDRPTRIRHFREESGRSMLIVAAVLTGFAATIAVGVVYNNARV
                     ALSLRARDLASLRVLGFTRGEISGILLSELAAQVLVALPLAVLLSHWFTGWVVSLSHV
                     ERFRLSPDVSAHRLAFAALATVLAAMVSGLLVRRKLDRLDLIAVLKTRE"
     gene            4178..5419
                     /locus_tag="VF061_09155"
     CDS             4178..5419
                     /locus_tag="VF061_09155"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX6669713.1"
                     /translation="MPEGAVRIVPGRLPARRPSNLRLVKRLLWALIGAALVGAIGYGL
                     RPAPVLVETATVARGTFRITVNEDGRTRVKDRYLVSAPLTGSIARPSLEAGDAVSQGD
                     VLVRMLPTASPMLDPRARAEAEARVEAAGAAVRQAATAVERTRAALIFARREAERQRT
                     LLRAGAAAPQVAEQAELAKRMRAEELASAEFGRQVAESELRVARAALTRLGNASVEPF
                     AIRSPVGGRVLRVLQESEGVVQTGTPLMEIGDPEALEIVVDVLTTDAVGIVPGAPVRI
                     DRWGGGEVLDGHVHRIEPSAFTRLSALGVEEQRVNVIIDLDAAPAARRALGDGYRVEV
                     AITVSEEPDRLLIPVGGVHRLDEGWSAFVVERGRARRRDVSLGGRNGSEATVERGLKE
                     GERVVLYPTDAVEDGVRVRDR"
     gene            5446..6183
                     /locus_tag="VF061_09160"
     CDS             5446..6183
                     /locus_tag="VF061_09160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669714.1"
                     /translation="MRARTVIKGGAAVALLAAGYSALTYYRYGRVSGIGPVNPLLDPF
                     MPRFDVREHHEAKVLAPADLTWASVRELDLHRSPLIRGIFQARQLFMGGRTGPEREPA
                     VPFLDEVLALGWRMLAEDPGQGMVLGAATQPWVADVVFRGLPAEEFTAFDEPGWVKIA
                     WTVQVTPLGQDASLFRTETRALATDPEARARFRRYWTVVRPGILLVRREMLRLVKREA
                     EAAARVSGDRRTTAPRLERDHPVPAAR"
     gene            complement(6116..6628)
                     /locus_tag="VF061_09165"
     CDS             complement(6116..6628)
                     /locus_tag="VF061_09165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669715.1"
                     /translation="MRGSRTVEGVATLLVVLTLACGLQPPAGPVPLEGSRAQLDSLSG
                     RWGGTYRATGASRHGVLRFDLRPGADTAYGEVEITFARALRLYGDAPDEPLPRSPCRV
                     LEIAFVRVESGAMRGALAPYWDPDCECQSLTVFEGRLVGPNRVEGTFTSRPAPDGPVR
                     VVGRWFADRR"
BASE COUNT          901 a         2385 c         2544 g         1001 t
ORIGIN      
        1 tccggatttg ttcgtccccg cttcacgctc ccttcacacc gccgccgcta ccctgttcgt
       61 cagccgggag gaacgtcgtg caactgcgtc acatcgtcgt cgcgaccgac gagtcggagg
      121 ccgggcgctc ggccgtacgg gccgggctgg atctcgccgt ccgcgcgtcc gcgcgcctca
      181 ccgtcatgcg ggtcgtaccc gtcgagacca agccgctgtt cggggccacg gcactggagc
      241 ggctggagcg gtggctgcag gccgagctcc aggacggcca cgccgtccgg gtcgagctgg
      301 ggatcgcctc gggcctcccc ggcatcgaga tctgccgctt cgccgagcag cggggcgccg
      361 acctcctggt cctcggccgg aagcaccgct cggccgtcgc ccggctcctg gtgggcgaca
      421 cggccgacgc ggtgatccgg cggagccgga cgccctgcct cttcgtcgaa caggagagcc
      481 tgaagctcag ccgagtgctg gtggcgctgg acggctcgga gcgcgggatg cgggtgttcg
      541 gcgccgcgcg gagcttcgcc gaggcggtcg gcgcgacgat cgccgtggtc acggtggaag
      601 acgtgcatgc gccgaatctc cccgacccgg tgccgcccct gccgctcacc cgcagcagcc
      661 ggctgtggcg ggagctggag ccgcaccacg gccgaggcgg gctgtcgacc gccaccgaga
      721 ccgcggtctc catccgacag ggcaaggtgg tgccggagat cctggcggag gtagcggagc
      781 gcagcgccga cgtgctggcg ttcggatgcc atcgcggcgg gccgtccggc attctcgaga
      841 ccggtgggac cggacgccac ctggcgcaca ccgcgccggt cagcgtgctg accatcccac
      901 tctgatgtcg ggggccggtg cgagcgctcg gcggacggcg gacccagccg gagacggcca
      961 tgacgaacga gcagtcgggt ggcgccccgg tcgcgatcgc accggcgccg gatagccggc
     1021 gtccccggac cgggaccgtc ctggagggca tcgcgctctc caaggtgtat cgcatggggg
     1081 aggtggaggt ccacgcgctg cgcggggtgg acctgcgcct gatcgccggc gagttcctcg
     1141 tgctgctggg accgtcgggc agcggcaagt ccaccctgct caacattctc ggcggactcg
     1201 acgtgccgac cggcggccgc gtcttctatc gggaccggga gctcaccacc gccgacgagt
     1261 cggagctcac ccgctaccgc cggcatcacg tcgggttcgt cttccagttc tacaacctca
     1321 taccgagcct gacggcgcgg gagaacgtcg cgctggtcac cgatatcgcg cgccgtccgt
     1381 tccagcccga ggaagtgctg gagctggtgg gcctggggga tcggctcgac cacttcccgg
     1441 ctcagctctc gggcggcgag cagcagcggg tggcgatcgc ccgggccgtc gccaagcggc
     1501 ccgacgtgct cctgtgcgac gagcccaccg gcgccctgga ttgccacacc ggcaggatcg
     1561 tgctggaggc gctcgtcaag gtgaaccggg agatcgggac cacgacggcg gtcatcaccc
     1621 acaatgccgc catcgccgcc atcggcgacc gcgtcgtcac cctgggtgac ggccggatcg
     1681 tgcgcgagga gcgccacgcc gccaaggcgt cggtcgagag cgtccgatgg tgagcgcgct
     1741 gaaccggaag ctgctgcgcg acctcgggca gctgcggggc caggtggtga cggtcgcgct
     1801 ggtggtggcg tgcggcatcg cggggtacgt cgcctttcag agcacctggg actcgctgga
     1861 gcactcccgg agcgcctact acgagcacta ccggttcgcc gacgccttcg tgcacctcaa
     1921 gcgcgcgccc gagtgggtcg ccggccggct ggaggccatt ccgggcgtcg cacgggtgta
     1981 tccgcggctg gtgcagacga tcactctccc gatctcgggg ccggtgcagc cgccgatcgg
     2041 ccagatcgtg agcctccccg ccgggaggca gcccccgctc aaccgcctgg tgctggaggg
     2101 tgggcgcctg ccggagccgg gggcggatcg cgaggcggtc ctgctgaccg ccttcgcgcg
     2161 gcgccacggc ctcgcgccgg gcgacgcgct cccggcggtg gtcaacggca cgctgcgcga
     2221 gctgcggatc gtggggctcg ccagctcgcc cgagttcgtc tatcccatgc cgcccggcgg
     2281 ggggaccttc gccgacgacg agcggttcgc cgtcctgtgg atggaccgca gcgtcatcgc
     2341 acccgccttc cagatggagg gcgccttcaa cgacgccgtg cttcgccttc agcccggggc
     2401 gttcgtcacc ggagtgctgc gggagatcga cgcgatcctg gagccgtacg gtggctacac
     2461 cgcggtggcg caggaccggc aggagtcgaa ctacatcgtg ctggaagaga tggcgcagct
     2521 gcgggcatgg gccaccgtcg tgccgctcat cttcctcagc gtctccgcct tcctggtgaa
     2581 cgtggtcctg tcgcgcctcg tcggcctcca gcggcccgag atcgcgaccc tcaaggccgt
     2641 gggctacacc aaccgcgaga tcggcctcca tttcctcggg ctggtctcca gtttcgtcct
     2701 cctgggcgcc gtgctcggct tcggactggg agcgtggctg ggccggtcgc tcacgggact
     2761 gtacaccgag gtgttccact tccccgtgtt cagctaccgc gtctccgccg gcacgatgct
     2821 gatcggcgcg gcggtgagcc tgctctcggc cgccgcgggc gccgccgccg cggtgcgtgg
     2881 cgtggtccgg ctcgcgccgg ccgaagccat gcgcccgccc tcgccggccg tctaccggcc
     2941 gctcctcagc gagcgcatcg gtctccacca cttcatctcc cacgcggggc gcatgatcct
     3001 gcgcgagctc gagcgccggc cgctgcgcac cgtcgcatcc tctgtgggca tcgccgcgtc
     3061 gatggccatc ctcgtggtcg gcaggatcgg ggaggatgcg atcggtgagg tcctcgatgt
     3121 gcagttccag cgggcctggc gcgaggatct caacgtcggg ttccgtgacg ccatgcccca
     3181 gcgggtcgtg ggggagctgg ctcaccttcc cggcgtcatc cgggccgagg ggatgcgcta
     3241 cctggcggcg cgtgccgtcg tggggacccg gagtcgtgac gtggccgtgc tggcctatcc
     3301 cgacggctcc gagctccagc gcgtggtgga tcggaggggc cgggtggtgg cgctgccgga
     3361 ggaaggcgcg ctcctgagcg agcagctcgg actgatcctg ggggcgggcc ccggcgacct
     3421 gatcgcgctg aagatgctcg agggcgagcg aaggacctat ccggtgcggg ttggcggcct
     3481 ggtgacggac atcgccgggc tgcaggtcta cctgcgccgc acggcgctgg aggggatgct
     3541 gggcgagccg ccgaccgtca ccaccgtgct cctgagcgtg gaggccgggc ggcgccgggc
     3601 ggtggagcgg cgtctcaacg acatgccaca ggtcgcttcg atcagcgatc gcccgacccg
     3661 gatccggcac tttcgcgagg agagcgggcg ctcgatgctc atcgtcgcgg ccgtgctcac
     3721 cggcttcgcc gcgaccatcg ccgtcggcgt ggtgtacaac aatgcccggg tggcgctctc
     3781 gctgcgcgcc cgggacctgg cgagccttcg ggtcctgggc ttcacccggg gcgagatctc
     3841 cgggatcctg ttgtcggagc tcgccgccca ggtgctggtc gcgctgcccc tcgccgtgct
     3901 cctcagtcac tggttcaccg gctgggtggt gtcgctcagc cacgtcgagc gcttccgcct
     3961 ctcccccgac gtctccgccc accggctggc cttcgccgcc ctggcgaccg tgctcgccgc
     4021 gatggtgagc ggcctcctgg tgaggcgcaa gctcgatcgc ctggacctca tcgcggtcct
     4081 caagaccaga gagtaagcca tgccggaaca gcctaccgtg gtgtcgattc cctccctcac
     4141 agcgactgag ccggccccgg tgaacggtac agggcctatg ccggagggtg ccgtccggat
     4201 cgttcccggc cggctgcccg cgcggcgtcc gagcaacctc aggctggtga agcggctctt
     4261 gtgggccctg atcggggccg cgctcgtcgg tgccatcggc tacgggctcc ggccggcccc
     4321 cgtcctggtc gagaccgcga ccgtcgcgcg aggcaccttc cgcatcaccg tgaacgagga
     4381 cggccgcacc cgggtcaagg atcgctacct ggtctcggcg ccactgacgg gctcgatcgc
     4441 gagaccgtcc ctcgaggccg gcgacgcggt gagccagggg gacgtgctgg tgcgcatgct
     4501 gcccaccgca tccccgatgc tggatccccg ggcgcgggcc gaggccgagg cgcgggtgga
     4561 ggccgcgggc gcggcggtga ggcaggccgc gaccgcggtg gagcggaccc gcgcggccct
     4621 gatcttcgcc cgtcgggaag cggagcgaca gcggaccctc ctccgggcgg gcgccgccgc
     4681 cccgcaggtg gccgagcagg cggagctcgc caagcggatg cgggcggagg agctcgccag
     4741 cgccgagttc gggcggcagg tcgcggagtc cgagctccgg gtggcgcggg ccgccctcac
     4801 ccggctcggc aacgcctcgg tcgagccttt cgccatccgc tctccggtgg gcggacgggt
     4861 gctgcgggtg ctccaggaga gcgagggcgt ggtccagacc ggcacgccgc tgatggagat
     4921 cggggatccg gaggcgctgg agatcgtggt ggacgtgctc acgaccgacg cggtggggat
     4981 cgtgcccggg gctccggtgc ggatcgaccg atggggcggc ggcgaggtgc tggacggtca
     5041 cgtgcaccgg atcgaaccgt ccgcgttcac ccggctctcg gcgctcgggg tcgaggaaca
     5101 gcgggtgaac gtcatcatcg atctcgatgc ggcgccggcg gcgcgccggg cgctcggaga
     5161 cggctaccgg gtcgaggtgg cgatcacggt cagcgaggaa cccgaccgcc tgctgattcc
     5221 cgtcggcggt gtccaccggc tggacgaagg ctggtccgcc ttcgtggtcg agcgcggccg
     5281 cgccagacgc agggacgtga gcctcggtgg gcggaacggc agcgaggcca cagtggagcg
     5341 agggctgaaa gaaggcgagc gcgtggtgct ttaccccacg gacgcggtcg aggacggtgt
     5401 ccgcgtccgc gacagatgac gaccgacaac gggagggagg cagtgatgcg agcacgcacc
     5461 gtgatcaagg gaggtgccgc ggtggcactt ctcgcggcag gatacagcgc actgacgtac
     5521 taccggtacg ggcgggtgtc cgggatcggg cccgtgaatc cgctgctcga tccgttcatg
     5581 ccgcgcttcg acgtgcggga gcatcacgaa gcgaaggtgc tggccccggc cgatctgacc
     5641 tgggcctcgg tacgggagct ggacctccac cggtcccccc tgatccgcgg catcttccag
     5701 gcccgccagt tgttcatggg cggtcggacg ggaccggagc gcgagccggc cgtccccttt
     5761 ctcgacgagg tgctcgccct cggctggcgg atgctcgcgg aggacccggg gcaggggatg
     5821 gtgctcggcg ccgcgacgca gccgtgggtg gccgatgtgg tgttccgggg cctgccggcg
     5881 gaggagttca ccgccttcga cgagccgggc tgggtgaaga tcgcgtggac ggtccaggtg
     5941 acgccgctgg ggcaggacgc gtcgctcttc cgcaccgaaa ccagagcgct ggcgacggac
     6001 ccggaggcgc gcgccaggtt ccgccggtac tggaccgtgg tgagaccggg cattctgctg
     6061 gtccggcgcg agatgctgcg actggtgaag cgggaggcgg aggccgcggc gcgggtcagc
     6121 ggcgatcggc gaaccaccgc cccacgactc gaacgggacc atccggtgcc ggccgcgagg
     6181 tgaaggtgcc ttccacccgg ttcggtccga ccagccggcc ctcgaacacg gtgagggact
     6241 ggcattcgca gtccggatcc caatacggcg ccagggcacc gcgcatggcg ccgctctcca
     6301 cccggacgaa cgcgatctcg aggacccggc aggggctccg gggcagcggc tcgtccgggg
     6361 cgtcgccgta cagccgcagc gcacgggcga aggtgatctc cacctcaccg taggccgtgt
     6421 ccgcgccggg ccgcaggtcg aagcgcagca cgccatgccg gctcgctccg gtggcgcggt
     6481 aggtgccgcc ccagcggccg ctgagggagt cgagctgggc gcgcgatccc tccagcggca
     6541 cgggcccggc cggaggctgg agcccgcaag ccagcgtgag cacgaccagc agcgtagcca
     6601 cgccttccac cgtcctgctg cctcgcacga tcacccccac gggtttcggg gcgccacatg
     6661 aaggaccacc accatgcatc ccggccgctg acccgggcgt gaaggcgtgg tgagggtttc
     6721 ttcatccccg gttcagggcg cgatcatcgg ggcggctgta cttgaacagg gactcccgga
     6781 cagcggagcc cggccatgac gaccgccgat cccatcagca ccccgtgggc g
//
LOCUS       DASUYN010000468         7608 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_368043, whole genome shotgun sequence.
ACCESSION   DASUYN010000468 DASUYN010000000
VERSION     DASUYN010000468.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7608)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7608)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7608
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_368043"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1373)
                     /locus_tag="VF061_09170"
     CDS             complement(<1..1373)
                     /locus_tag="VF061_09170"
                     /inference="COORDINATES: protein motif:HMM:NF025684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4384 domain-containing protein"
                     /protein_id="HEX6669716.1"
                     /translation="MSLTLLLPFLLAGEPAKPATAAAADPPIRIWINNDGRFLRGDRA
                     RVHVRAEDDGYLVVLQADTEGHLRVLFPIDPTDDNFVRGGKKYEVDGRGGRDAFDVGD
                     RAGRGTVYAAVSRAPFRFDEFVLSDHWDYRALEPNRLPEDPESELTELVRRMAQGSFD
                     YDVMSYYVVESVVYANDSYRSSAGFYYDDFGCGYYRSCGSGLSVSLFFGRPFYRRHYY
                     GPYYYAYDPYYDPFFYDPWYYRPSYYYSPAYYNPRHYWGYPYHYRSVVHHHHYWNRPY
                     SPYRFRDRTLVNTDYRDRRYTFGRAVNTVYTPPRSRFTEPETSSPLRRSLDRGEGVRP
                     EATVSRRVSGTAVTDRAEPRREVERRTEKGTIEARRSRPRETPRASDTRSRREVGPVD
                     VSPRRSGSDDSDSRIGRRSGDDSPPGATRAEPRSEPRAEPRSAPRSEPRAEPRSTPRS
                     EPRAEPRS"
     gene            complement(1574..4483)
                     /locus_tag="VF061_09175"
     CDS             complement(1574..4483)
                     /locus_tag="VF061_09175"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX6669717.1"
                     /translation="MSDTPQRLAAALGDRYAFEREIGAGGMATVYLARDLRHSRPVAI
                     KVVRPELSGADGLARFLREIELAARLQHPHILPVFDSGAVDDGAGGRTPYFVMPFVQG
                     ETLRARLVREKQLPVEDAIALATEVADALAYAHANGVVHRDIKPENILLSGGHAVVAD
                     FGVAKALAAPGGDPSALTQVGFAIGTPNYMAPEQATGRDQVDARADQYSLGCVLYEML
                     AGSAPFAGGTAQSVVARNMTAPRPHVARVRQEVPDALEDVIIRAMAIDPADRYPDMAG
                     LATALRQSRASARPRRKTVMAVIAAASVAAGAAGAVAWLATRPAAVAVTEAAETIAVL
                     PFSASGPGVEVLGEGMVDLLTTNLQGVGGIKAVDPRLVLKRWAREGRDDAGGLEDALE
                     LGRDLEAASVVTGSAVSAGGRVRLAADLHAVAGGERLGRAQVDGPADSILPLVDRLSV
                     ALLRDVWRSREPLPSLDLGSLTTDSIAALRAYLQGERYYRRFALDSALAQYTLAADVD
                     STFALAHLRRALVFGWTGGYGSPASVAAAEAGFRYAEKLPPRSRRLLEGYRAFQDGGT
                     RAIDTLRAYVEDYPADLEGWYLYAEALHHLVDIEARSPDSIIAAFDRVIAGDSTLTPA
                     VIHPLELAMIHRDSARYQRYLRIFARSAPPARVSAHEVGARIVWGPSPPESAIRAAIA
                     AVPHIGFYAVVAAYRDGKATSDSLLALRARLMAALPASSPQHRFEPVDRGYMLVGFGR
                     LKEARALVDTVAALSPGAAAGLLGWPVALGLDPRAHALTRADSLLALERANAESPQEG
                     AYLDAVRAIALGQAEEGRRLATDGLRAPGGTADSVRSRGLLRAAIGWARLVEGDTAEG
                     IADLRTGLSVTGGPRAGETAFLRFQLALALSADPRTRAEGIDHLRYSFNGNAVHLLPL
                     SFLALGRTYEAAGKPDSAALAYGRFLRLWDRADPELQGRVTEAREALARLTSEPR"
     gene            complement(4497..5951)
                     /locus_tag="VF061_09180"
     CDS             complement(4497..5951)
                     /locus_tag="VF061_09180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669718.1"
                     /translation="MIGTLAFRHLLVKKVRSLFLLLGFSIGVGVMIVLLSVGEAMLEQ
                     SRDVSLVGGGEVTVLPQGIDVEAMRTGGIGGMFFTIERARFLTRQALGGERMGDLVRT
                     VAPAIEGKVLYLCPAGDACRPTAVRAGGEIPSRAAALGAGLDVLEGRWADSPADSAYV
                     TPTPQQLYDELDRFHLPRTRDSTWGEWHYFNLVTGPEEWWYLTFLVGGEVDLADRSER
                     WGGRMLVTHRRPDGRHDRYTADVPAAGVRLDTARADLAIGESWVRQRDGEYRLHVSAR
                     GDRGQARLDLVVRPAPNRYFPPVELRQDDFLSGYVVPALAARASGRVCASGRCADVRD
                     AVAYHDHNWGVWRGVTWEWGAAQGERLSLLYGGVYGPREAGSSPFFLTVVDSLGVRRV
                     LRFGRIDYRGGRAADGLPGARAPERFTLLGTWEADTVRLSVEVEHALASEVTASTHRR
                     TFLQMRGRFELSGRVTGDSLHDRGQGFFETYLSQ"
     gene            complement(5948..6646)
                     /locus_tag="VF061_09185"
     CDS             complement(5948..6646)
                     /locus_tag="VF061_09185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX6669719.1"
                     /translation="MNTPPLLVARDLRKDYPMNGETVHALRGVSLAVQPGEYVAIAGP
                     SGCGKSTLLQLMGGIDTPSGGTVELLGTRLDTLGDRELTRLRLTRLGFVFQRFHLLPV
                     LTARENVELPMAEAGVAAPRRRARARELLEYVGLGPREGHRATQLSGGEMQRVAIARA
                     LANRPAILLADEPTGELDAATGREILDLFRRLHRDGTTLVVVTHDERLAAEAGRVVHM
                     LDGRIVSDDGARRA"
     gene            complement(6643..>7608)
                     /locus_tag="VF061_09190"
     CDS             complement(6643..>7608)
                     /locus_tag="VF061_09190"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEX6669720.1"
                     /translation="TDVVRTIRDAPGVEAAGAVLGTSVYGRTADSLVTLFGYGIQPEA
                     QGLYLVTDGADLDPADTLGLLLSEPAAALLGAGVGDTVALAGRLDPQMAQAGVNRRLT
                     VRGTVRWVYDYRGQPSVGTVLPVMQRLDGDPAADRASLLLVKASEDSGVEALAAALRE
                     RFPRLEIYSVADLVVEAKRRLVYFTQLSFVLGGMSLVVAVLLVGTLLTITVNERLGEI
                     ATLRAIGVGRGTIVRQVLAEGATLTVLGGGAGILLGLVTADYLDGILTSFPGLPQAFS
                     FFVPRAGTLTLAAVVLLVTGSLAGLYPAWLASRAPIAATLRAEAT"
BASE COUNT         1120 a         2696 c         2794 g          998 t
ORIGIN      
        1 gagcgcggct cggcgcgcgg ctccgagcgg ggggtcgagc gcggctcggc gcgcggctcc
       61 gagcggggcg ccgaccgtgg ctcggctcga ggctcggacc tcggctcggc cctggtggcc
      121 cccggggggc tgtcgtcgcc cgagcgccga ccgatacggg agtccgagtc gtccgagccc
      181 gaccggcggg gagaaacgtc caccggcccg acctcgcgcc ggctccgggt gtcggaagcc
      241 cgtggggtct cgcgtggacg ggagcgccgc gcctcgatcg tgcccttctc ggtacgccgc
      301 tcgacttcgc gcctcggctc tgcgcggtcg gtgaccgcgg tgccggagac ccggcgcgag
      361 accgtcgcct cgggccggac gccctcgccc cgatccagcg accggcgcag cggggacgag
      421 gtctccggct ccgtgaaccg tgacctcggc ggcgtgtaca cggtgttcac cgcccggccg
      481 aaggtatagc ggcggtcgcg atagtcggtg ttcacgagcg tgcgatcgcg gaaccggtat
      541 gggctgtagg ggcggttcca gtagtgatgg tggtgcacca ccgaccggta gtggtagggg
      601 tagccccagt agtgccgcgg gttatagtag gccgggctat agtagtaaga gggccggtag
      661 taccaggggt cgtagaagaa cgggtcgtag tacgggtcgt aggcgtagta gtacggcccg
      721 tagtagtgcc ggcggtagaa cgggcggccg aagaagaggc tgaccgagag cccgctgccg
      781 cagctccggt agtacccgca gccgaagtcg tcgtagtaga agccggccga cgagcggtag
      841 gagtcgttgg cgtacacgac gctctcgacc acgtagtagc tcatcacgtc gtagtcgaag
      901 ctgccctgcg ccatccggcg caccagctcg gtcagctcgg actcggggtc ctcgggcagg
      961 cggttgggtt ccagcgcccg gtaatcccag tggtcgctga gcacgaactc gtcgaaccgg
     1021 aagggcgccc gggagacggc cgcgtagacg gtcccgcggc cggcgcggtc gcccacgtcg
     1081 aaggcatcgc ggccgccgcg gccatccacc tcgtacttct tgccgccgcg gacgaagttg
     1141 tcgtccgtgg ggtcgatcgg gaacagtacc cggagatgtc cctcggtgtc ggcctggagg
     1201 acgaccagat aaccgtcgtc ctcggcccgg acgtgcaccc tcgcgcggtc gccccggagg
     1261 aagcggccgt cgttgttgat ccagatacgg atcggaggat ccgccgccgc cgcggtcgcc
     1321 ggtttggccg gctcgcccgc gagcagaaat ggaaggagca gggtgaggga catggcgcct
     1381 cccgaacttc cgttgccttg ctgaaaagta tgacggggca ccgcattagc cggctcgagg
     1441 acatgttgcg aaccgcgtgc caccgcctac ctgcaagaaa gctaaccact taggagggga
     1501 gatcgttccc cgggcgtcct ccggcgaggg ctctatgccc ttaggacgag gacacttgga
     1561 gggagttaat cgctcagcgg ggttccgagg tgagacgcgc cagggcctcc cgggcttcgg
     1621 tgacgcgccc ctggagctcg ggatcggccc tgtcccagag ccggaggaag cgaccgtagg
     1681 ccagcgcggc ggagtccggc ttcccggcgg cctcgtaggt ccggccgagg gcgagaaagc
     1741 tgagcgggag gagatggacg gcgttgccgt tgaagctgta ccgcaggtga tcgatgcctt
     1801 ccgcgcgggt gcgggggtcg gccgacaggg ccagggcgag ctggaagcgg aggaacgcgg
     1861 tctctccggc acgcggcccc ccggttacgg acaggccggt acggaggtcg gcgatgcctt
     1921 ccgccgtatc tccttcaacc aggcgcgccc aaccgatcgc cgcgcgcagc aggccgcggc
     1981 ttctcacgga gtcggcggtc cctcccgggg ctcggagtcc gtcggtcgct agccgccgac
     2041 cctcctcggc ctgccccagt gcgatggcgc gcacggcgtc taggtaggct ccctcctgcg
     2101 ggctctcggc gttcgcccgc tccagcgcca ggagcgagtc cgcccgtgtc agggcgtgtg
     2161 cgcgcgggtc cagtccgagg gccaccggcc agccgagcag cccggccgcg gctccgggcg
     2221 agagggcggc cacggtgtcc accagagcgc gcgcctcctt caggcggccg aatccgacca
     2281 gcatgtaccc ccggtcgacc ggctcgaacc gatgctgggg agaggaggcc ggaagcgccg
     2341 ccatgagcct ggcgcgcagg gcgagcaggc tgtccgacgt cgccttcccg tcccgatagg
     2401 cggccaccac ggcgtagaag ccgatgtggg gcacggccgc gatcgccgca cgaatggcgc
     2461 tctcaggggg ggacggcccc cagacgatcc ttgcacccac ctcgtgggcg gagacacggg
     2521 ctggcggtgc ggagcgcgcg aagatccgga ggtagcgctg gtaccgggcg ctgtcgcgat
     2581 ggatcatcgc gagctcgagc ggatggatca ccgcgggcgt gagcgtcgag tcgcccgcga
     2641 tgacccggtc gaaggccgcg atgatgctgt ccggactgcg ggcctcgatg tccaccagat
     2701 ggtgcagcgc ttcggcgtag agataccagc cctccagatc cgccgggtag tcctcgacgt
     2761 aggcccgcag cgtgtcgatg gcgcgggtac cgccgtcctg gaaggcccgg tacccctcca
     2821 gcagccggcg gctccggggc ggcagctttt cggcgtagcg gaagccggcc tccgccgccg
     2881 cgaccgaggc cggactgccg tagcctccgg tccatccgaa gaccagcgcg cgccgcaggt
     2941 gggccagcgc gaaggtcgag tccacgtccg cggccagtgt gtactgggcc agcgccgagt
     3001 cgagggcgaa gcgccggtag taccgctcgc cctggagata ggcccggagg gcggcgatcg
     3061 agtcggtggt cagcgatccg agatcgaggc tcgggagcgg ctcccgcgag cgccacacgt
     3121 cccgcaggag cgcgacgctc agccggtcca ccagcggcag gatgctgtcg gcggggccgt
     3181 ccacctgcgc ccggccgaga cgctcgccgc cggcgaccgc atggaggtcg gccgccagac
     3241 ggacccgccc gcccgccgag accgcgctgc cggtcaccac cgaggcggcc tcgagatccc
     3301 ggccgagctc gagcgcgtcc tcgagtcctc ccgcgtcgtc ccggccttcc ctggcccagc
     3361 gcttcaagac cagccgcgga tccaccgcct tgatcccgcc cacgccctgg aggttggtcg
     3421 tgagcaggtc caccatgccc tcgcccagca cctcgacgcc ggggcccgac gcactgaagg
     3481 gcagcaccgc gatcgtctcc gccgcctcgg tcaccgccac cgcggcggga cgggtggcca
     3541 accaggcgac cgcacccgcc gcgcccgccg cgacggaagc cgccgcgatc accgccatca
     3601 ccgtcttccg ccgggggcgc gcgctcgcgc gcgactgccg cagcgccgtg gcgagcccgg
     3661 ccatgtccgg gtagcggtcc gccgggtcga tcgccatggc ccggatgatc acgtcctcca
     3721 gtgcgtcagg gacctcctgc cggacccggg cgacgtgggg acgcggagcc gtcatgttgc
     3781 gggcgaccac ggactgtgcc gtgccgcccg cgaatggagc gcttcccgcg agcatctcgt
     3841 agagcacgca gccgaggctg tactggtccg cccgggcatc cacctggtcg cgcccggtgg
     3901 cctgctccgg cgccatgtag ttcggcgtgc cgatcgcgaa cccgacctgg gtgagggcgg
     3961 aggggtcgcc ccccggcgcc gccagcgcct tggcgacgcc gaagtccgcg accacggcat
     4021 gccccccgct caagaggatg ttctcgggct tgatgtcgcg atgcaccacc ccattggcgt
     4081 gggcgtaggc cagggcgtcc gccacctcgg tggcgagggc gatcgcgtcc tccaccggca
     4141 gctgcttctc ccgcaccagc cgcgcgcgca gcgtctcgcc ctgcacgaag ggcatgacga
     4201 agtagggcgt cctgcccccg gcgccgtcgt ccacggcccc ggaatcgaag acgggaagga
     4261 tgtgtgggtg ctggagtcgg gccgcgagct cgatctcgcg caggaaacgg gcgaggccat
     4321 ccgctccgct gagctcgggg cggaccacct tgatggccac ggggcgggag tggcggaggt
     4381 cgcgggccag atagaccgtg gccatgccgc cggcaccgat ctcccgctcg aacgcgtagc
     4441 gatcgccgag cgctgccgcc agacgctgag gggtgtcgct catgggatga cccaatctac
     4501 tgggacagat aggtctcgaa gaacccctgt ccgcggtcgt gcagtgagtc tcccgtcacc
     4561 cgtccactca gctcgaagcg gccgcgcatc tggagaaagg ttcgacggtg ggtcgaggcg
     4621 gtcacctcgc tcgcgagcgc gtgctccacc tccaccgaca gtctcacggt gtccgcctcc
     4681 caggtgccga ggagcgtgaa ccgctcggga gcgcgcgcgc ccgggaggcc gtccgccgcg
     4741 cggccgcccc ggtagtcgat ccgcccgaag cgcagcaccc ggcgcacacc gagggagtcc
     4801 acgacggtga gaaagaaggg ggaactgccg gcctcccgcg gtccgtagac gccgccgtag
     4861 agcaggctca gccgctcgcc ctgggccgcg ccccattccc aggtcacccc gcgccagaca
     4921 ccccagttgt ggtcgtgata ggcgacggcg tcacgcacgt cggcgcagcg gccggaggcg
     4981 cacacgcggc ccgacgccct cgccgccagc gccgggacga cgtagccgga gaggaagtcg
     5041 tcctggcgca gctcgaccgg agggaagtac cggttgggcg ccggtcgcac gaccagatcg
     5101 agccgcgcct gcccccggtc gccccgggcc gacacgtgga ggcggtactc gccgtcgcgt
     5161 tggcggaccc agctctcgcc gatcgccagg tcggccctgg cggtgtcgag tctcaccccc
     5221 gcggcgggca cgtccgcggt gtagcgatcg tggcgtccgt cgggacgacg gtgggtgacc
     5281 agcatcctgc ctccccagcg ctcgctccga tccgccaggt ccacctcgcc gccgacgagg
     5341 aaggtcaggt accaccactc ctccgggccg gtcaccaggt tgaagtagtg ccactcgccc
     5401 caggtggagt cgcgggtgcg tgggagatga aagcggtcga gctcgtcgta gagctgctgc
     5461 ggcgtgggcg tgacgtaggc cgagtcggcg ggagagtcgg cccatcgccc ctccagcacg
     5521 tcgagcccgg cacccagtgc ggcggcgcgg ctggggatct cgcccccggc ccggaccgcg
     5581 gtgggccggc aggcgtcccc ggcgggacag aggtagagga ccttgccctc gatggcgggg
     5641 gccacggtgc ggacgaggtc ccccatccgc tcgcctccga gggcctgccg ggtcaggaac
     5701 cgcgctcgct cgatggtgaa gaacattccg ccgatcccgc cggtccgcat ggcctcgaca
     5761 tcgatgccct gcgggagcac ggtgacctcg cctccgccga cgagcgagac gtcgcgcgac
     5821 tgctccagca tcgcctcgcc taccgagagc aggacgatca tgaccccgac gccgatggag
     5881 aagccgagca ggagaaagag cgatcggacc ttcttgacca gcaggtggcg gaaggccagg
     5941 gtgccgatca tgcccgcctc gcgccgtcgt ccgagacgat gcggccgtcc agcatgtgaa
     6001 ccacccgacc cgcttccgcg gccagccgct cgtcgtgggt gacgacgacc agggtggtgc
     6061 cgtcgcgatg gagccggcgg aagaggtcga ggatctcgcg gccggtggcg gcatccagct
     6121 cgccagtggg ctcgtccgcg aggaggatcg cggggcggtt ggccagcgcc cgggcgatgg
     6181 cgacgcgctg catctccccc ccggagagct gggtggcccg gtgcccctcc cgcggaccga
     6241 gaccgacgta ctccagcagc tcccgcgcgc gcgcgcggcg ccggggcgcc gcgaccccgg
     6301 cctccgccat cggcagctcc acgttctccc gggcggtgag cacgggcagg agatggaagc
     6361 gctggaagac gaagccgagg cgggtcaggc ggagccgggt gagctcgcga tcgccgaggg
     6421 tgtcgagcct ggtcccgagc agctccacgg tgcctccgct cggcgtatcg atcccgccca
     6481 tgagctgaag gagagtggac ttcccacacc ccgacgggcc ggcgatggcc acgtactcgc
     6541 ccggctgcac ggccagggag acgccccgca gcgcgtgcac cgtctccccg ttcatcggat
     6601 agtccttccg caggtcgcgg gcgaccagga gtggaggcgt gttcatgtcg cctccgcgcg
     6661 gagcgtggcc gcgatgggcg cgcgcgaggc cagccacgcg gggtagagcc cggcgagcga
     6721 gccggtcacc agcagcacca ccgccgccag cgtcaaggtg ccggcgcggg ggacgaagaa
     6781 ggagaacgcc tgcggcaggc ccggaaagct ggtgaggatg ccgtccaggt agtccgcggt
     6841 gaccagaccc agcaggatgc cggcgccgcc gccgaggacg gtgagcgtcg cgccttcggc
     6901 gaggacctgg cggacgatgg tgccgcggcc cacgccgatc gcgcgcaggg tcgcgatctc
     6961 gcccaggcgc tcgttgacgg tgatggtgag cagcgtcccc accaggagca cggccaccac
     7021 gaggctcatc ccgccgagca cgaaggagag ctgggtgaag tacaccagac ggcgcttggc
     7081 ctcgaccacc agatcggcca cgctgtagat ctccagccgg gggaaccgct cccgcagggc
     7141 cgccgcgagc gcctccacgc cgctgtcctc gctcgccttc accagcagga gcgaggccct
     7201 gtcggccgcc gggtcgccgt cgaggcgctg catgaccggc agcaccgtac cgaccgacgg
     7261 ctggccgcga taatcgtaga cccaccggac ggtgccccgc accgtgagcc ggcggttcac
     7321 gcccgcctgc gccatctgcg ggtcgaggcg gcccgccagc gccaccgtgt cgccgacgcc
     7381 ggctcccagc agggcggcgg ccggctcgct gagcaggagg ccgagcgtgt cggcggggtc
     7441 cagatcggca ccatcggtca ccaggtagag gccctgggcc tcgggctgga tgccgtagcc
     7501 gaacagggtc accagcgaat ccgccgtgcg tccgtagacg gaggttccga gcaccgcgcc
     7561 ggcggcctcg acgccgggcg cgtcccggat ggtgcgcacg acgtcggt
//
LOCUS       DASUYN010000469         2054 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_587132, whole genome shotgun sequence.
ACCESSION   DASUYN010000469 DASUYN010000000
VERSION     DASUYN010000469.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2054
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_587132"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2038
                     /locus_tag="VF061_09195"
     CDS             <1..2038
                     /locus_tag="VF061_09195"
                     /inference="COORDINATES: protein motif:HMM:NF019351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HEX6669721.1"
                     /translation="EMRWMALVVAVAASTAAAAPLPWGTLNPLTIPKYVTPLVVPPAM
                     PNAVDPLTGLPVANTYDVALRQFFQQVLPAGFPATKVWGYGATDVPASFHYPAFTINA
                     TQGTQTTVTWRNELVVDPVACKAARVLDPATLDPSCNFLPHMFPIDQTLHWANPAMDC
                     RVGEIGPDCRGNSPLQYTGPVPIVTHLHGGHIDPMVDGYPEAWFLPDANNIAGYAAVG
                     SNYPTNMGWAPGTAVYTYRNDQRGTTLWYHDHALGITRSNVQAGTAGFYFLRDAYEMD
                     LINGTNVTGFNASLSRIPSGAQEIPLAIQDRSFNADGSIFFPDTRAFFDGFAGPYYPD
                     TDVPPTWNPEYFGNTMVVNGNTWPFHNVEARRYRVRFLNGTDSRFLILQWADAKGRAI
                     PLTFAIMGNDGGFLPGKPVGVPQLVIGPGERYDTIIDFGGFGGTSVMLQNVGPDSPWG
                     GGAVPAALRADPATTGQVMLFNVALPPAKFKDPALPPGRIVLNQPPDPFGGPAATGTA
                     RTLTLNEIVTVLPFGGPIEAQLGDWTGPIPWRSAITEFPPVGSTEIWNLVNRTVDSHP
                     IHLHQVQFVVMDRTPIDLAAWDAAVAACAAAPGTCPPTGPDPMLFARKGALPLPASLW
                     EAGAKDTVITNPGEITRVRAFFDIPGLYVWHCHILSHEDNEMMRQFCVGGGCLK"
BASE COUNT          314 a          773 c          659 g          308 t
ORIGIN      
        1 agagatgcga tggatggcgc tcgtcgtggc ggtggccgcc tcgacggcgg ccgcggctcc
       61 gctgccctgg ggcacgctga acccgctgac gatcccgaag tacgtgacgc cgctcgtggt
      121 gccgcccgcg atgccgaatg cggtcgatcc gctgacgggc ctgccggtgg cgaacaccta
      181 tgacgtcgcc ctgcgccagt tcttccagca ggtgctgccg gcgggcttcc cggccacgaa
      241 ggtctggggc tacggcgcga cggacgttcc ggccagcttc cattacccgg cgttcacgat
      301 caacgccacg cagggcacgc agacgacggt gacctggcgg aacgagctgg tggtggaccc
      361 ggtcgcctgc aaggccgcca gggtgctcga tccggccacg ctcgacccga gctgcaactt
      421 cctgccccac atgttcccca tcgaccagac gctgcactgg gcgaacccgg cgatggactg
      481 ccgggtcggc gagatcggcc ccgattgccg cggcaacagc ccgctgcagt acacgggccc
      541 cgttcccatc gtgacccacc tgcacggcgg gcacatcgat ccgatggtcg acggctatcc
      601 ggaggcgtgg ttcctgccgg acgcgaacaa catcgccggg tacgcggcgg tcgggtcgaa
      661 ctacccgacg aacatgggct gggcgcccgg caccgccgtc tacacgtacc gcaacgacca
      721 gcgcggcacg acgctctggt accacgacca cgcgctcggc atcacccgca gcaacgtcca
      781 ggccggcacg gcggggttct acttcctgcg tgacgcctac gagatggacc tcatcaacgg
      841 caccaacgtg acgggcttca acgcctcgct cagccggatc ccgagcggcg cgcaggagat
      901 cccgctcgcc atccaggatc ggtcgttcaa cgcggacggc tccatcttct tcccggacac
      961 ccgcgcgttc ttcgacggct tcgccggtcc ctactatccg gacaccgacg tcccgcccac
     1021 ctggaacccg gagtacttcg gcaacaccat ggtggtgaac ggcaacacct ggccgttcca
     1081 caacgtcgag gcgcgccgct accgggtccg cttcctgaac ggcaccgact cgcgcttcct
     1141 catcctgcag tgggccgacg cgaagggccg cgccatcccg ctcaccttcg ccatcatggg
     1201 gaacgacggc ggcttcctcc ccggcaagcc ggtcggcgtc ccgcagctcg tcatcggccc
     1261 cggtgagcgg tacgacacga tcatcgactt cggcggcttc ggaggcacgt cggtcatgct
     1321 gcagaacgtc ggccccgact cgccgtgggg tggcggcgcg gttcccgccg cgctgcgcgc
     1381 ggatccggcc accaccggcc aggtgatgct cttcaacgtc gcgctgccgc cggcgaagtt
     1441 caaggatccg gccctgcccc cgggcaggat cgtcctgaac cagccgcccg atccgttcgg
     1501 cggccccgcc gcgaccggca ccgcccgcac cctcaccctg aacgagatcg tgacggtgct
     1561 cccgttcggc ggaccgatcg aggcgcagct cggtgactgg actggcccga tcccctggcg
     1621 gtcggccatc actgagttcc cgcccgtcgg ttccaccgag atctggaacc tcgtgaaccg
     1681 cacggtggac tcgcacccga tccacctgca ccaggtccag ttcgtggtga tggatcgcac
     1741 gcccatcgac ctcgccgcct gggacgcggc ggtggccgca tgcgccgcgg ctccgggcac
     1801 ctgcccgccg acgggccccg acccgatgtt gttcgcgcgc aagggcgcgc tgcccctgcc
     1861 cgcgagcctc tgggaggccg gcgccaagga cacggtcatc accaaccccg gtgagatcac
     1921 ccgcgtccgg gcgttcttcg acatccctgg cctgtacgtg tggcactgcc acatcctctc
     1981 gcacgaggac aacgagatga tgcggcagtt ctgcgtgggc ggcggctgcc tgaagtgagc
     2041 cggacgccgg cgta
//
LOCUS       DASUYN010000470         4848 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_368340, whole genome shotgun sequence.
ACCESSION   DASUYN010000470 DASUYN010000000
VERSION     DASUYN010000470.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4848)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4848)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4848
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_368340"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..544
                     /locus_tag="VF061_09200"
     CDS             <1..544
                     /locus_tag="VF061_09200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669722.1"
                     /translation="LVARQLRAAGLATLLVELLTPREREAPAGGFETALVADRLQAAT
                     EWAHEQPEVNGLVPGYLGIGNGAGAALLAAAAGGVRVGAVVSHAGLPDLAADALYAIR
                     APTLLIAAGHDEAVLEPNRRAYRCLSCVKRLVVIPSATGAFEDGKSMEEVGRWTAEWL
                     VQHLVMVPRWAASRSGSGAR"
     gene            complement(516..2222)
                     /locus_tag="VF061_09205"
     CDS             complement(516..2222)
                     /locus_tag="VF061_09205"
                     /inference="COORDINATES: protein motif:HMM:NF019887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEX6669723.1"
                     /translation="MSRYYRAVAVDYDGTLTERDAPDPEVIAAIRRARGAGRLVVLVT
                     GRILSSLRTSFPDAERTFDAIVLENGCVIWRPGQDRRPVAQPVPPELADALEARGIPV
                     ERGDVLLATPATHDQVVLQEIARLGLEVQLVRNRGALMLLPPGVSKGTGLAEALADLG
                     VSGHSAIAVGDAENDHSLVESCELGVAVANAVPSLQAHADVILGERAGRGVIQLLGGA
                     LLRGDVRVQPKRWQVRLGLGDDGAVTVPGSQINLLITGGAESGKSHLAGLVAERLVGM
                     GYRVCVIDPEGDHTGLEMLRGFVVVGGTEPSPSPEALGRLLRLGSLVVDLSLRGAAQR
                     VAETRQLLELLAEHRRRDGIPHWIILDEAHLVPDLAALLELEPGRFAAGVVAVTWRPD
                     RLGAATLAAMDCAVVFPGTDAAGGAALAAAGFVLPREPRPPVRGRIEGVLLDRRSARG
                     FVADARTSMHLRHWHKYQSAELPHHQRFFFRRPDRPTGAVAASMADFHHEIGRAEPEV
                     LRHHARNRDFSRWTDDVIRDHDLAARLRETEDIVGRKWSASPEEGRRLLLQVIERHYR
                     SD"
     gene            complement(2226..3725)
                     /locus_tag="VF061_09210"
     CDS             complement(2226..3725)
                     /locus_tag="VF061_09210"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX6669724.1"
                     /translation="MSAPVPHAPLRRVEVPPAATLDDYAAVAHLAGAVAELRREAESM
                     AARLAGRTIWMVSSTAQGGGVAEMLPPIVSLLRDLGVRTEWVVIGSTDGAFFDLTKRI
                     HNLIHGVGRPELGDTDRALYERVNRANADALRPLMAPGDILVVHDPQPLPMALQLREV
                     GGFTAVWRCHIGLDSENAATRAAWTFLAPYLDAYDAAVFSAPEYIPERLAKRSSVIFP
                     GIDPLSPKNGDLSLRQTIEGMCSGGLIRCPGPTVGDRYQTQAQRLLPDGRWAPALTDD
                     FGLLTRPIVTQVSRWDRLKGFLPLLEGFVSLKRTHPGEALTPLQHRHLELARLVLAGP
                     DPAAIQDDPEALEVLEELRGAYRSLSSAAQEEIAILLLPMHSVMENALMVNALQRASA
                     IVAQNSLREGFGLTIAEAMWKRVPILSNSRACGPRQQVRDGLDGRLVDDPEDREELAR
                     VLADMLSDPVRLERWGHSAQRRAHDHLLVFDQLRAWGSLLDKLVSHPRE"
     gene            complement(3778..>4848)
                     /locus_tag="VF061_09215"
     CDS             complement(3778..>4848)
                     /locus_tag="VF061_09215"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX6669725.1"
                     /translation="LDTAAFRRALSGERSLSEGVWHGRGSRSLYGPAPASASSVAVLE
                     VATSLVPVERVGRNVLGRMLVTALLGALATLVGAAWLARSALAPVAAIARQARSIQAG
                     RPGQRITAHADVTELEGLIEILNQMLARLERSAERHRQLIRHLGHDLRTPITTMRAGV
                     EMALWSERRPDQYREVLASTLEEVDRLTLISDALTLLAKLESGELAPMLTEADLRTVT
                     RQAVDRARERVGANPLRFTGPPGELLAPVDSRLLGMVLDQLLDNARRHTPPGTAVDVS
                     VAATDGHVRLTVEDHGPGVTDEMLPHLFQHFYRGDPARGRYAGFGLGLTLAASIVELH
                     RGRIIAERGSSGGLRVRIDLPR"
BASE COUNT          678 a         1755 c         1763 g          652 t
ORIGIN      
        1 gctggtcgcg cggcagctcc gggcggcggg gttggccacg ctcctcgtgg agctgctcac
       61 tccgcgcgag cgggaggcgc cggcgggtgg gttcgagacg gccctcgtgg ccgatcggct
      121 tcaggccgcc accgagtggg cgcacgagca gcccgaggtc aacggcctcg tccccggcta
      181 tctcgggatc ggcaacggcg ccggcgccgc gctcctcgcg gccgctgcgg gtggcgtccg
      241 ggtgggcgcc gtggtctccc atgccggact cccggatctc gccgccgacg ctctctacgc
      301 cattcgagcg ccgaccctgc tgatcgcggc cggccacgac gaagccgtcc tggagccgaa
      361 ccgccgggcc tatcggtgcc tgagctgcgt caagcggctg gtcgtgattc cgagcgccac
      421 cggcgccttc gaggacggaa agagcatgga ggaggtgggg cggtggacgg cggagtggct
      481 ggtccagcac ctggtgatgg tgccgcggtg ggcggctagt cgctccggta gtggcgctcg
      541 atgacctgaa ggagcagccg ccggccctcc tccggcgacg cgctccattt cctgcccacg
      601 atgtcctccg tctcccgcag tctggcggcg agatcgtggt cccggatgac gtcgtcggtc
      661 cagcgactga agtcgcggtt cctggcgtgg tgcctgagca cctccggctc ggcccgaccg
      721 atctcgtggt gaaagtccgc catgctcgcc gccaccgccc cggtcgggcg gtccggccgg
      781 cggaagaaga agcgctggtg atggggtagc tccgcgctct ggtacttgtg ccagtggcga
      841 aggtgcatgc tcgtccgcgc gtccgccacg aacccccgcg ccgaccggcg gtccagcaac
      901 acgccctcga tgcgcccccg aaccggcgga cgcggttccc ggggaagcac gaatcccgcc
      961 gcggcaagcg cggcgccgcc ggccgcgtcg gtgccgggaa acacgacggc gcagtccatg
     1021 gcggccaggg tcgcggcccc gagccggtcc ggccgccagg tcaccgcgac gacgcctgct
     1081 gcgaatcgcc ccggctccag ctcgagcagc gcggcgagat ccggcaccag gtgcgcctcg
     1141 tccaggatga tccagtgcgg gatgccgtcg cggcgccggt gctcggccag cagctccagg
     1201 agctgccgag tttcggccac gcgctgggcc gcgcccctga gcgagagatc cacgaccagg
     1261 ctgccgagcc ggagcaggcg accgagagcc tccggggacg ggctcggttc cgtccccccg
     1321 accaccacga agcctcggag catctcgagg ccggtgtgat cgccttcggg atcgatgacg
     1381 cagacccggt agcccatccc caccagccgc tccgccacga gacctgccag gtgcgacttg
     1441 ccgctctccg cccctccggt gatcagcaga ttgatctggg agcccgggac ggtcaccgcc
     1501 ccgtcgtcgc cgagaccgag gcggacctgc caccgcttcg gctgcacccg gacgtccccc
     1561 cgcagcagcg ctcctcccaa cagctggatc acccctcgcc ccgctcgctc gccgaggatc
     1621 acgtcggcgt gggcctgcaa cgagggcacc gcgttcgcga ccgccacgcc gagctcacag
     1681 ctctccacca gggagtgatc gttttccgcg tcgcccacgg cgatggcgct gtggcccgag
     1741 acgccgaggt cggccagcgc ctccgccagc cccgtgccct tggagacccc cggcggcagc
     1801 agcatgagcg ccccgcggtt gcggaccagc tgcacctcca gacccagccg ggcgatctcc
     1861 tggagcacga cctgatcgtg ggtggcgggc gtggccagga ggacgtcccc tcgctccacc
     1921 ggaatgccgc gggcctccag cgcgtcggcc agctccggcg gcaccggctg ggcgaccgga
     1981 cggcgatcct gtcccggacg ccagatcacg cagccgttct ccagcacgat ggcgtcgaag
     2041 gtgcgctcgg cgtcggggaa gctggtgcgc aggctggaca ggatccggcc ggtcaccagc
     2101 acgaccagtc gtccggcgcc ccgcgcgcgc cggatcgcgg cgatcacctc gggatcaggg
     2161 gcgtcgcgct cggtcagggt gccgtcgtag tccaccgcga cggcgcggta gtatcgcgac
     2221 acgcgtcatt ccctcggatg gctcaccagc ttgtccagca ggctgcccca cgcgcggagc
     2281 tggtcgaaga ccagcaggtg gtcgtgggcg cgtcgctggg cggaatggcc ccatcgctcc
     2341 agccgcacgg gatcggacaa catgtccgcc agcacgcggg cgagctcctc gcggtcctcc
     2401 gggtcatcga ccagccggcc gtcaagacca tcgcggacct gctggcgggg cccgcacgcg
     2461 cggctgttgc tgaggatcgg cacccgcttc cacatcgcct cggcgatcgt gagcccgaag
     2521 ccctcgcgca gggagttctg ggccacgatg gccgaggctc gctgcagggc gttcaccatg
     2581 agggcgttct ccatcaccga atgcatcggc aggaggagga tcgcgatctc ctcctgggcg
     2641 gctgacgaca gcgagcggta ggcgccgcgc aattcctcca gcacctcgag cgcctcggga
     2701 tcgtcctgaa tcgccgcggg atcgggtccc gcgagcacca gtcgggccag ctccaggtga
     2761 cggtgctgca gcggcgtgag cgcctcgccg ggatgggtcc gcttgagtga aacgaacccc
     2821 tccagcagcg ggaggaagcc cttgagccgg tcccagcgcg agacctgagt gacgatcggg
     2881 cgagtgagga gcccgaagtc gtcggtcagc gcgggagccc agcggccgtc gggcaggagc
     2941 cgctgcgcct gcgtctgata gcggtcaccg acggtggggc cggggcaacg gatcaggccg
     3001 ccgctgcaca tgccctcgat ggtctgtcgc agcgacaggt cgccgttctt gggagacagg
     3061 gggtcgatgc cgggaaagat gacgctcgac cgtttcgcga gtcgctcggg gatgtactcg
     3121 ggagccgaga agacggccgc gtcgtaggcg tcgaggtagg gggccaggaa ggtccaggcg
     3181 gcccgggtgg cggcgttctc ggagtccagg ccgatgtggc agcgccacac ggcggtgaac
     3241 ccgccgacct cgcgcagctg cagcgccatc gggagcggct gtgggtcgtg cacgaccagg
     3301 atgtcgccgg gcgccatcag cgggcggagc gcgtcggcgt tcgcccggtt cacccgctcg
     3361 tacagcgcgc ggtcggtgtc gcccaactcg ggcctgccga cgccgtggat caggttgtga
     3421 atgcgcttgg tgaggtcgaa gaaggccccg tccgtgctgc cgatgacgac ccactcggtc
     3481 cgcacgccga ggtcgcgaag gagggagacg atcggcggga gcatctccgc cacgccgccg
     3541 ccctgtgcgg tggagctgac catccagatg gtccgccccg cgaggcgggc ggccatgctc
     3601 tcggcctcgc gcctcagctc cgcgaccgcc ccggcgagat gggcgacggc ggcatagtcg
     3661 tcgagggtgg cggccggggg cacctcgacg cggcggagcg gggcatgcgg cacgggcgcg
     3721 ctcatccgct gcatggaagt cgcgcgccgg accccgcgca aggcggccct ccgggcctca
     3781 acggggaaga tcgatccgca cccggagccc acccgaactc ccgcgctcgg cgatgattcg
     3841 gccccggtga agctctacga tcgaggccgc cagcgtgagg ccaagcccga agcccgcgta
     3901 ccgtccgcgg gcgggatcgc cgcgatagaa gtgctggaag aggtgcggca gcatctcgtc
     3961 cgtcaccccg ggcccatgat cctccaccgt gagccgcacg tggccgtcgg tggcggcgac
     4021 cgagacgtcc accgccgtcc ccggtggcgt gtggcgtcgg gcgttgtcca gcagctggtc
     4081 gagcaccatg ccgaggaggc gggagtccac cggggccagc agctccccgg gagggccggt
     4141 gaaccggagc gggttggcgc cgacccgctc ccgcgcccgg tccaccgcct gccgggtcac
     4201 cgtccggaga tcggcctcgg tgagcatcgg ggccagctcg cccgactcca gcttcgccag
     4261 cagggtcagc gcatcgctga tcagcgtcag gcgatccact tcctccagcg tgctcgccag
     4321 cacctcgcgg tattgatcgg gccggcgctc gctccagagc gccatctcca cgccggcccg
     4381 catcgtcgtg atgggcgtgc ggagatcgtg gccgaggtgg cggatgagct gccggtgccg
     4441 ctcggcgctc cgctccagcc gggccagcat ctggttcagg atctcgatca ggccctccag
     4501 ttccgtcacg tccgcgtggg cggtgatccg ctggcccggc cggccggcct ggatggaccg
     4561 ggcctgccgg gcgatcgccg ccaccggggc gagtgccgac cgggccagcc acgccgcacc
     4621 gacgagcgtg gccagcgcgc cgagcagggc ggtcacgagc atgcgtccga gcacgttccg
     4681 gcccacgcgc tcgaccggca cgagtgacgt agcgacctcg agcaccgcga cggacgacgc
     4741 gctggccggg gcgggcccgt agagcgagcg ggagcccctg ccgtgccaga ccccctcgct
     4801 gaggctgcgc tcgcccgaga gcgcacggcg gaaggccgcc gtgtcgag
//
LOCUS       DASUYN010000471         5926 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1030569, whole genome shotgun sequence.
ACCESSION   DASUYN010000471 DASUYN010000000
VERSION     DASUYN010000471.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5926)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5926)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5926
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1030569"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(315..1226)
                     /locus_tag="VF061_09220"
     CDS             complement(315..1226)
                     /locus_tag="VF061_09220"
                     /inference="COORDINATES: protein motif:HMM:TIGR00147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HEX6669726.1"
                     /translation="MARALLITNPAAARTQPRAVEAVMRAFRSAGWTAEVLATGGPGD
                     ARLLAEYGVAEGVDVVAVFGGDGTTMQAAAALVGTDVALGVIPGGTGNLLAGNLRIPA
                     SPERAARALVAAKPRPFDLGRMERPGGLQYFAVACGAGYDARVMAGTLSEHKRRWGMA
                     AYVATTLRLITDIRSTSHVITIDGVEYDAHAAMVLVANCGEVIPPLVRLRAGIRPDDG
                     FLDVVVMRANSFGESVRAVWDLLRDAPTAEGQETYVGYARGREIRVETDPVQPVQLDG
                     EPGGETPFTAVVVPGAIKIMVPSRGKA"
     gene            complement(1228..5601)
                     /locus_tag="VF061_09225"
     CDS             complement(1228..5601)
                     /locus_tag="VF061_09225"
                     /inference="COORDINATES: protein motif:HMM:NF016260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HEX6669727.1"
                     /translation="MRRRVARFLFVFVMGTVAMVLGVVTSMTLTPPGRDLLARTVSRM
                     LDRVVLGHVEVGAISGSFLYDLVLQDLVVRDTSGTLLAELPRVRVGYRLPNLLAGQVV
                     LGSVQLERPVIQLIKHRSGRMNYEEVLRLGKGAPGGRSPLVDFYNVRMNGGTLRITLP
                     WNPDRSLTTQEARDSALAAERARPGRVIEESPEGLRRVILLSDLTTRLSRLRIATPDR
                     LPFTIDLDSLATRINDPAVTLRDAAGRVVLRGDSAIFSLSRGALPATRFSGGGAVTWP
                     RDTILYDFQVIAPEVSLEDLRWVSPDFPSMAGRGVLAARSITGARTEYDIRDLRLVNG
                     RQEVNGELVAITQRRRGLGVRDMRLQLRDLDLDAVRPYLDTLPFYGTLSGSVFGSGFL
                     DDLDVRLDWAFADARVPGNPVSLIAGEGGVGARGEQGLVFTGFEVRSSDIDLRTVRLI
                     APAVILEGRLAATGRLDGPLRDVTFDGSARHRDGQRPPSVVIGQVHLDTRYDTLGLAT
                     DVALDPLSFEGIRRAFPSLRTRGEVRGRFRSSGTLGRLAVDADLAGEIGSVRARGFAT
                     LLPPRWGAEELLLRFSRVDLGALTGRDFTSSLNGELSVTGSIDTLRAPEGEIQLALTR
                     SRVREWVLDSVFARGGSRDSIVRVDTAYAEWQGARAAGAGTLGWAAPHSGEMAFTLVA
                     DSLIGFDSLLLAVTGQRRDSASELVPLGGAARGAVRLSGSLDSLDAAGELAAAGLEFQ
                     QYRSPGVAGTFAWTGGRRPQLTASATADSITAGDWVFSRNSASVGGYLDSLAWGVGTS
                     AGATTRVDAAGSWRVRDSVHRIGLDTLQAALPTHRYRLLEPATLTLDSSPTVTPVSLQ
                     ALDGSGLVRMSGSLPSEAAGAMTLEVLGLELSDLYGLLQRDTAGVDGELGMSLEIGGT
                     TRAPTFRGTVRLGEGRFGDFRAPFVLGVLNYAERRLDANLNLWRTGENILEIEAHLPL
                     DLGLTGVEQRQVDGPLQVRADADSVDLGILEALTPAFRRVQGRLAVDANVEGTWERPR
                     LSGTLAIRNGAMDVPGLGVRFGSVEGGAVLRGDSLLLQELRLTSGGGTLAAGGAVRLE
                     NLSRPLFDLDLQANQFLAIDVRNFLTLTGTGNVLLRGPLLGATLTGNLTANSGVLYFA
                     DLVNKRVIDLDDPTIADLVDSTMIQAEDLRGQFQNRFLDSLRVEDLRIAIGSDVWLRS
                     AEANIQLDGEARVSKTGREYQPIGTLQAPRGSYTLKIGPVSRDFTVTHGEVRYIGTLD
                     AQLDIEARHTVRAVRGEEIPVIAIIEGTLYAPKLRLESTLRPPIPEGDLISYLITGYP
                     ANEATTFGGANLVEVFSSALTSELERTLIQDLGVPVDLIEIRPGVGSGGTASPTQLAA
                     GWQLGRKTFLTFNAGFCPDFSQISTRNLGAGIEFRFSKEWRLQSAIEPTIQRCGGAAA
                     IPLDSRNRYQIGSDILWEREF"
     gene            complement(5601..>5926)
                     /locus_tag="VF061_09230"
     CDS             complement(5601..>5926)
                     /locus_tag="VF061_09230"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HEX6669728.1"
                     /translation="LAVGNVELRVPSPIFGSRLRLAAFVDAGGAWQRGDGDPVIRVTP
                     GIGLRVATPLGPARLDMAYNPYRLQAGPLFQFDQDGELSPVQEAFVLDRDGRLTFHFA
                     VGQPF"
BASE COUNT          868 a         2131 c         2131 g          796 t
ORIGIN      
        1 gatgccgggc aggtgcaggt cgaggatgac cacctcgggg cgcagccggt cgaaggtcgc
       61 cagtccggct tccccgctca gctcccgggt gacctcgtac cccagcttct cgaagtagtt
      121 cccgatgctg cgcagaacgt ccacgtcgtc atcgatgagc agaaccgata cggccatgca
      181 ggagacctcg accgacggag cttgaacggt gaagggcgtg aaaggtgaaa agtgcaaggt
      241 gtgccgggga cgccccgccc aaaaactaaa cactcagcgc cgtcgcgcca tgcctccctt
      301 tcccttttca cctttcacgc cttcccgcgc gatggaacca tgatcttgat cgcgccgggc
      361 accacgaccg ccgtgaacgg ggtctcgccg cccggttccc cgtcgagctg caccggctgc
      421 accggatcgg tctcgacccg gatctcgcga ccccgtgcgt acccgacgta agtctcctgt
      481 ccctcggccg ttggcgcgtc gcgcaacaga tcccagacgg cccggacgct ctccccgaag
      541 ctgttggccc gcatcacgac cacgtccaga aatccgtcat cggggcggat gccggcccgg
      601 agtcggacca gcggggggat gacttcgcca cagttggcca ccaggaccat ggccgcgtgg
      661 gcgtcgtact ccacgccgtc gatggtgatg acatgactgg tgctgcggat gtcggtgatg
      721 agtcgcaggg tcgtggccac gtacgccgcc atgccccagc ggcgcttgtg ctccgacagg
      781 gttccggcca tgactcgcgc gtcgtagccc gccccgcacg cgacggcgaa atactggagg
      841 cccccggggc gctccatccg ccccaggtcg aagggcctgg gcttggccgc gaccagcgcc
      901 cgggccgccc gctcgggcga ggcggggatc cggaggttgc ccgccagcag gttgccggtg
      961 ccgcccggga tcacgccgag ggcgacgtcg gtccccacca gcgccgccgc ggcctgcatc
     1021 gtggtcccgt cgcccccgaa caccgccacc acgtccaccc cctccgcgac gccgtattcc
     1081 gcgagcaggc gcgcgtcgcc ggggcctccg gtggcgagca cctcggccgt ccacccggcg
     1141 ctcctgaagg cgcgcatcac cgcctccaca gcccgcggct gggtcctcgc ggcggcgggg
     1201 ttggtgatca gcaacgcgcg cgccatctca gaactctcgc tcccacagga tgtcggagcc
     1261 gatctggtag cggttgcgcg aatcgagcgg gatcgcggcc gcgcccccgc agcgctggat
     1321 ggtgggctcg atcgcgctct ggagccgcca ctccttgctg aagcggaact cgatgccggc
     1381 gccgaggttc cgggtgctga tctggctgaa gtcggggcag aagcccgcgt tgaaggtgag
     1441 gaaggtcttg cggccgagct gccagcccgc cgccagctgg gtgggcgacg cggtgccgcc
     1501 gctgccgacc cccggccgga tctcgatcag gtccaccggc acgccgaggt cctggatcag
     1561 cgtgcgctcg agctcgctgg tcagcgcgct ggagaagact tccaccaggt tcgctccgcc
     1621 gaaggtcgtc gcctcgttcg ccgggtagcc ggtgatgagg taggagatga ggtcgccttc
     1681 cgggatcggc ggccgcagcg tgctctccag gcgcagcttg ggggcgtaca gggtgccctc
     1741 gatgatggcg atgaccggga tctcctcccc ccggacggcg cgcacggtgt gacgggcctc
     1801 gatgtccagc tgcgcgtcca gggtgccgat gtagcgcacc tcgccgtgcg tcaccgtgaa
     1861 gtcccgggag acgggaccga tcttgagggt gtagctcccc cgcggcgcct ggagcgtccc
     1921 gatcggctgg tactcgcggc cggtcttgct cacccgcgcc tcgccgtcga gctggatgtt
     1981 cgcctcggcc gagcggagcc agacgtcgga gccgatggcg atgcggaggt cctcgacccg
     2041 gagcgagtcg agaaaccggt tctggaactg tccccgcagg tcctccgcct ggatcatcgt
     2101 gctgtccacc aggtccgcga tggtgggatc gtcgaggtcg atcacccgct tgttcaccag
     2161 gtccgcgaaa tagagcacgc cgctgttggc cgtgagattg ccggtgaggg tggcgccgag
     2221 gagcggaccc cgcagcagca cgttcccggt cccggtgagg gtgaggaagt tcctcacgtc
     2281 gatcgccagg aactggttgg cctggaggtc caggtcgaag agcgggcggg agagattctc
     2341 cagccggacc gcgccgccgg ccgcgagagt gccgccgccg ctggtgagtc gcagctcctg
     2401 cagcaacagg gagtcgcccc gcagcacggc gccgccctca accgagccga accgcacacc
     2461 gaggccgggg acgtccatcg ccccgttccg aatggcgagc gtgccggaga gccggggccg
     2521 ctcccaggtg ccctccacgt tcgcgtccac cgcgagccgg ccctgtaccc ggcggaacgc
     2581 gggcgtcaac gcctcgagga tgcccaggtc cacgctgtcg gcgtccgccc gaacctggag
     2641 gggtccgtcc acctggcgct gctcgacgcc ggtgaggccg aggtccaacg ggaggtgagc
     2701 ctcgatctcc aggatgtttt cgccggtacg ccagaggttg aggttggcgt cgagccggcg
     2761 ctccgcgtag ttcagcacgc ccagcacgaa gggggcgcgg aagtcgccga agcgcccttc
     2821 gcccagccgc accgttccgc ggaacgtggg tgcccgcgtg gtcccgccga tctcgaggct
     2881 catccccagc tcgccgtcca ccccggccgt atcccgctgg agcaggccat agagatcgct
     2941 gagctccagt cccaggacct ccagcgtcat cgcgcccgcg gcctccgacg gcaggctccc
     3001 gctcatgcgc accaggccgg acccgtccag cgcctggagg ctcaccgggg tcaccgtcgg
     3061 cgagctgtcg agggtgagcg tggcgggctc gagcagccgg tagcggtggg tcggcagcgc
     3121 ggcctggagc gtgtcgagcc cgatccggtg cacgctgtcg cgcacccgcc agcttcccgc
     3181 cgcgtccacc cgcgtcgtcg ctcccgcgct ggtgcccacg ccccaggcga gcgagtcgag
     3241 gtagcctccc accgaggcgc tgttccggct gaagacccag tcgccggcgg tgatcgaatc
     3301 ggcggtggcc gaggccgtga gctggggccg gcgcccgccg gtccaggcga aggtgcccgc
     3361 cacgccgggc gagcgatact gctggaactc gaggcccgcc gccgcgagct cgccggcggc
     3421 gtcgaggctg tcgaggctgc cgctcagccg cacggcgccg cgcgcggcgc cgcccagcgg
     3481 caccagctcg gaggcgctgt cgcgccgctg gccggtgacc gcgaggagca gggagtcgaa
     3541 gccgatcagg ctgtcggcca ccagcgtgaa cgccatctcg ccgctgtgcg gcgcggccca
     3601 gcccagcgtg ccggcgcccg cggccctcgc gccctgccac tcggcgtagg ccgtgtccac
     3661 ccggacgatg ctgtcgcggc tgccgccgcg ggcgaagacg ctgtcgagaa cccactcgcg
     3721 cacccggctc ctggtgagcg cgagctggat ctcgccctcg ggcgcgcgga gggtgtcgat
     3781 gcttccggtc acgctcagct cgccgttgag cgagctggtg aaatcgcggc cggtgagcgc
     3841 gccgaggtcc acccgggaga agcggagcag cagctcctcc gctccccagc gcggcggcag
     3901 cagggtggcg aagccccgcg cgcgcacgct gccgatctcg ccggccaggt cggcgtccac
     3961 cgccaggcgg ccgagcgtgc cggagctccg gaaccgcccc cgcacctcgc cgcgggtgcg
     4021 gagcgagggg aaggcgcggc ggatcccctc gaacgagagc gggtccagcg ccacgtcggt
     4081 ggcgagtccg agggtgtcgt agcgggtatc gaggtgcacc tgcccgatga ccacgctcgg
     4141 cggacgctgg ccgtcgcggt gacgcgcgga gccgtcgaag gtgacgtcgc ggagcggccc
     4201 gtccagccgg ccggtggcgg cgagccgccc ctccaggatc accgcgggcg cgatgagccg
     4261 caccgtgcgc aggtcgatgt cggagctccg cacctcgaac ccggtgaata ccagcccctg
     4321 ctccccccgg gcgccgaccc cgccctcgcc ggcgatcaga ctcaccgggt tccccggcac
     4381 gcgggcgtcg gcgaaagccc agtccaggcg cacgtcgagg tcgtcgagga agcccgagcc
     4441 gaacacgctg ccggagagcg ttccgtagaa cggcagggtg tcgagatagg ggcgaaccgc
     4501 gtcgaggtcg agatcgcgca gctggagccg catgtcgcgc accccgaggc cgcggcggcg
     4561 ctgggtgatc gcgaccagct cgccgttcac ctcctggcga ccgttcacga gccgcaggtc
     4621 gcggatgtcg tactcggtcc gggccccggt gatcgagcgc gccgcgagca cgcccctccc
     4681 cgccatcgag gggaagtcgg gcgacaccca gcgcaggtcc tcgaggctca cttccggggc
     4741 gatgacctgg aagtcgtaca ggatggtgtc gcggggccag gtgacggccc ccccgccgga
     4801 gaagcgggtg gccggcagcg cgccgcgcga gaggctgaag atcgcgctgt cgcctcgcag
     4861 caccacgcgg cccgccgcgt cgcggagggt gacggcgggg tcgttgatcc gggtggcgag
     4921 cgagtcgagg tcgatggtga acggcagccg gtccggcgtg gcgatgcgga gccgcgagag
     4981 cctggtggtg agatcggaga ggagaatgac ccggcggagg ccctcggggc tctcctcgat
     5041 gacccggccc ggccgggcgc gctccgccgc gagcgccgag tccctggcct cctgcgtggt
     5101 gagcgagcgg tcgggattcc aaggcagcgt gatgcgaagc gtgccgccgt tcatacgcac
     5161 gttgtagaag tccaccagcg gcgaccggcc tcccggcgcg cctttgccga gccggaggac
     5221 ctcctcgtag ttcatccgcc cgctgcgatg cttgatcagc tggatcaccg gacgctcgag
     5281 ctgcaccgag cccagcacca cctgcccggc gagcaggttg ggaagccgat agcccacccg
     5341 gacccggggg agctcggcca gcagcgtgcc gctggtgtcc cgcaccacca gatcctgcag
     5401 caccaggtcg tacaggaagg agccggagat cgcgcccacc tccacgtgcc cgagcaccac
     5461 ccggtccagc atgcgggaga cggtgcgcgc gagcaggtcc cggcccggcg gcgtgagggt
     5521 catggacgtc accacgccga gcaccatggc cacggtgccc atgacgaaga cgaacaggaa
     5581 ccgcgccact cgccgccgca tcagaagggc tgtcccacgg cgaagtggaa cgtgagccgg
     5641 ccgtcgcggt cgagcacgaa cgcctcctgg accggggaga gctcgccgtc ctggtcgaac
     5701 tggaacagcg ggccggcctg gagccgatac ggattgtagg ccatgtcgag acgcgcggga
     5761 ccgagcggcg tggccacgcg gagcccgatg ccgggcgtca cccggatcac gggatcgccg
     5821 tcgccccgct gccaggcgcc gccggcatcc acgaacgccg ccaggcggag ccgggagccg
     5881 aagatgggtg agggcacccg gagctccacg ttgcccaccg cgaggg
//
LOCUS       DASUYN010000472         2518 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1690990, whole genome shotgun sequence.
ACCESSION   DASUYN010000472 DASUYN010000000
VERSION     DASUYN010000472.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2518
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1690990"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..374
                     /gene="leuD"
                     /locus_tag="VF061_09235"
     CDS             <1..374
                     /gene="leuD"
                     /locus_tag="VF061_09235"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: protein motif:HMM:TIGR00171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HEX6669729.1"
                     /translation="WALADYGFKAIIAPSFADIFYANCCQNGLLPVVLADGAVEELFQ
                     RAETKGYEVTVDLRTQTVGDANGFCTRFEIEEYRRQMMLRGLDEIGRTLLEEPRIAAF
                     ERRRLALGAAKAAPPSSRKKR"
     gene            371..1474
                     /gene="leuB"
                     /locus_tag="VF061_09240"
     CDS             371..1474
                     /gene="leuB"
                     /locus_tag="VF061_09240"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: protein motif:HMM:NF012407.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003862 - 3-isopropylmalate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HEX6669730.1"
                     /translation="MKEFTVAVLPGDGIGPEVTAEAVRVMTAVADLYGYRIRTAEYAV
                     GAAGVVEAGVALPARTRSAVVEADAVLLGAVGSPALANATGDQRPEAGLLALRRLLGV
                     YANLRPVVVHPALRHVSPLRPERLEGVDLLIVRELTGGLYYGEPRGRDARSAVNTLRY
                     SVAEIERVARVAFRAARERRGRVTSVDKANVLEVSQLWRDTVSRVAAEYPEVQLEHLY
                     VDYAAMRVVSDPAAIDVLLTENLFGDILSDEAAVLVGSLGLLPSASLGQGPGLFEPVH
                     GSAPDLAGRGVANPIGAIASVAMLLRYALELAEAAELVEQAITAVLAAGARTSDIALP
                     GEARISTREMGEIVTRRVMKGNEQNLRPIALRK"
     gene            complement(1491..>2518)
                     /locus_tag="VF061_09245"
     CDS             complement(1491..>2518)
                     /locus_tag="VF061_09245"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF013113.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEX6669731.1"
                     /translation="SSTMAAEEAEKAESAGRSAGVLVEAIRRRILPRRILTRQAFENG
                     IAVAMAIGGSTNAVLHLLAIARAAGVPLELDDFETIRARVPVLCDLKPSGRFVATDLH
                     RAGGIPQVMKILLAHGVLHGDALTISGETVAELLREVPNEPRADQDVIRPWNRPLYPQ
                     GHLAILRGNLAAEGAVAKITGVKTAAMTGPARVFDSEESCLEAILGGRIRAGDVIVIR
                     YEGPRGGPGMREMLAPTSAIIGAGLGDSVGLITDGRFSGGTYGMVVGHVAPEAAAGGT
                     IALVQEGDRITIDAGRRLLQLEVPEAELGRRRAAWTPPKPKYTTGVLHKYARLVSSAS
                     LGAVTDL"
BASE COUNT          402 a          828 c          857 g          431 t
ORIGIN      
        1 cgtgggctct cgcggattat ggtttcaaag cgatcatagc gccgtcgttt gccgacatct
       61 tctatgcgaa ctgttgccag aacggtctgc ttccggtggt gctggccgac ggcgccgtgg
      121 aggagctgtt tcagcgggcg gagaccaagg gctatgaagt gacggttgac ctgaggacgc
      181 aaaccgtcgg cgacgcaaac ggattctgca cccgattcga gatcgaggag taccggcgcc
      241 agatgatgtt gcgcggcctg gacgagatcg ggcgaacgct gctggaagaa cctcggatcg
      301 ccgccttcga gcgccgccgc cttgccctgg gcgcggcaaa ggccgctccg cccagctcgc
      361 gaaaaaagcg atgaaagaat tcacggtggc ggtactgccg ggcgacggca ttggaccgga
      421 ggtcaccgcg gaggcagtcc gtgtcatgac tgcggtggcc gacctctacg ggtaccgtat
      481 caggacggcg gagtacgccg tcggagccgc gggcgttgtt gaggcggggg tggccctgcc
      541 cgcccgaacc cgcagtgccg ttgtggaggc ggacgcggtt ctgctcggtg cggtggggag
      601 tccagcactg gcaaacgcaa ccggagatca acggccggag gccggactcc tggcgctccg
      661 ccgcctgctc ggcgtctacg ccaatctccg gccggtggtg gtgcatccgg ctctgcgaca
      721 cgtgtcgccg cttcgccccg agcgattaga gggtgtggat ctcctgatcg tgcgtgagct
      781 cactggaggt ctctactacg gcgagccccg cgggcgagac gcgcggagcg cggtcaacac
      841 gctgcgctac agcgtggcgg agatcgagcg ggttgcgcgg gtagcgttcc gcgccgctcg
      901 ggaacgacgg ggccgggtga cctcggtaga caaggcgaac gtgctggagg tctcccagct
      961 ctggcgggac acggtgagca gagtggcggc cgagtatccc gaggtgcagc tggagcacct
     1021 ctacgtggac tatgccgcga tgcgggtggt ttccgatcct gccgccatcg atgtgctgct
     1081 caccgagaat ctgttcggcg acatcttgag cgatgaggcc gccgtgctcg tgggctcgct
     1141 cggcttgctc ccgtctgcct cgctcggaca aggccccggc ctgttcgagc cggtgcacgg
     1201 ctcggcgccg gatctggccg gccggggcgt ggccaacccc atcggagcca ttgcctctgt
     1261 tgccatgctg ctgcggtacg cgctcgagct ggcagaggcc gccgagctgg tcgagcaggc
     1321 aattacggcc gtcctcgccg cgggagcgcg cacctccgac atcgcattac ccggcgaagc
     1381 ccgtatctcg acccgcgaga tgggagagat cgtgacccgc cgcgtgatga aaggaaacga
     1441 gcagaacctt cgcccgatcg ccctgaggaa atgatggggc gcactgtgac ctacaggtcg
     1501 gtcacggctc ccaggctcgc gctcgagacc agtctggcgt acttgtgcaa cacgccggtc
     1561 gtatactttg gtttcggcgg agtccaggct gcccggcggc gtccgagctc cgcctctgga
     1621 acctcgagct gaagcagtct gcggccggcg tcgatggtta tccggtcgcc ctcctgcacc
     1681 agcgcaatcg ttcctcccgc agccgcctcg ggcgcgacgt ggcccaccac cataccgtac
     1741 gtccctcccg agaacctgcc gtcggtaatc aatccaaccg agtcgcccaa accggcgccg
     1801 atgatggcgg atgtgggtgc cagcatctcc cgcatgccgg gtccgcctct tggcccttcg
     1861 tagcggatca cgatcacgtc gccggcgcga atccgtccgc ccagaatcgc ctcgagacag
     1921 ctttcctccg aatcgaagac ccgggccggg ccggtcattg ccgcggtctt cactccggtg
     1981 atcttcgcta ccgccccttc ggcggcgagg ttgcctcgca ggatggcgag gtgcccctgc
     2041 gggtataacg ggcggttcca gggccggatc acatcctgat cggccctggg ctcgtttggc
     2101 acttcacgca acagctccgc cacggtttct ccgctgatgg tgagcgcgtc tccgtgaagg
     2161 acgccatggg ccagcaggat cttcatgacc tgaggaatcc cacccgcgcg gtggaggtcg
     2221 gtggcgacga accgaccgga cggcttgaga tcgcacaaga ccggcacgcg ggcgcgaatg
     2281 gtttcgaagt cgtccagctc gagcggcacg ccggccgccc gcgcgatcgc cagcagatgc
     2341 agcacggcgt tagtggagcc gccgatcgcc atggcgaccg caatgccgtt ctcgaacgcc
     2401 tgccgggtga ggatccggcg gggaagaatt cgccgccgga tcgcttctac aagcacgccc
     2461 gccgaccgcc ccgcgctttc ggccttctcc gcctcttccg ccgccatggt ggacgaga
//
LOCUS       DASUYN010000473         2685 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1472519, whole genome shotgun sequence.
ACCESSION   DASUYN010000473 DASUYN010000000
VERSION     DASUYN010000473.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2685)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2685)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2685
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1472519"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1257
                     /locus_tag="VF061_09250"
     CDS             <1..1257
                     /locus_tag="VF061_09250"
                     /inference="COORDINATES: protein motif:HMM:NF012700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HEX6669732.1"
                     /translation="IGDRQSIAASLSTFSAHVAMLRRILAEADASALVLLDEVGSGTD
                     PAEGAALAAAILASLTDRGALTLATTHLGALKDLASHTPGVVNASLQFDAATLTPTYL
                     FEKGVPGRSYGLAIARRLGLGAEILADAEARVPDAERNLDALLAAAEERGREARETQA
                     RLEQREAELASLGVRLAAQEESQRAREAELKRLEKEADRAGRRQARQYLMDARKLVEE
                     ALGAARAAGTAADEEAAREARRMVELGIGEHAEVGERDDEPAPGAEAPAIAVKARVRL
                     PSGGTGEVLELRDDGTAVVTAGAMKIVLEASTLTPLPPRGRDPSRREARPAGMLPPAD
                     PAGAALEVDLRGLTGDEAEQATIAAVDAAVLAEQPLLRIIHGMGTGVVRDRVRRVVSG
                     DRRVARFGFAPRNQGGTGVTIVEFSA"
     gene            1254..>2685
                     /gene="dnaG"
                     /locus_tag="VF061_09255"
     CDS             1254..>2685
                     /gene="dnaG"
                     /locus_tag="VF061_09255"
                     /inference="COORDINATES: protein motif:HMM:TIGR01391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_process: GO:0006269 - DNA replication, synthesis of RNA
                     primer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HEX6669733.1"
                     /translation="MSMIPDETVDQVRESADLLALIGEAVELKRTGSDYRGPCPFHGG
                     THRNFAVIPKKNRYYCFVCHASGDVFSWLMKRFGMDYPTAVREAARRTGIVIPETPGR
                     AGPDPREPLFGAAAVAQDWFTRQLLESDEAAGARAYLEGREIPLETAGQHGLGFAPAG
                     RAFLTAMKELGVDEKVLLEAGLTAQRDDGKVVPRFRSRLLFPIHDLRGRVVGFGGRLL
                     VPGEPKYLNSPETPIFHKGKQLYNLHQAKAAIRKEESVILVEGYFDVFRLVLAGIEHV
                     VAPLGTALTGDQAGLLRRFARTATLLYDSDQAGLRATFRAGDELLRHGVRVRVATMPE
                     GEDPDSLVRRGGAAALQPILDDGIDLLERKIQLLERKGWFEGVEHQREALDRLLPTIR
                     AAADPITRDLYLKTVAERTGVSREVLREQAAARAAAPAAPPPDAPTPGRGRPVRPARR
                     RKADAEVAAERLLLWVLMRDRSWIPKA"
BASE COUNT          369 a          945 c         1041 g          330 t
ORIGIN      
        1 atcggggacc gccagtccat cgccgccagt ctctccacct tcagcgcgca cgtcgcgatg
       61 ctgcgccgca tcctggccga ggccgacgcg tcggcgctgg tgctgctgga cgaagtcggg
      121 agcggcaccg acccggcgga aggcgccgcg ctggcggctg cgattctcgc ctcgctgacc
      181 gaccgcggcg cgctcaccct cgccacgacg cacctcggcg cgctcaagga cctggccagc
      241 cacacgcccg gtgtggtgaa cgcctcgctg cagttcgacg ccgccacgct cacgccgacc
      301 tatctcttcg agaagggcgt gcccggccgc tcctacggcc tggcgatcgc ccggcggctc
      361 ggcctcgggg ccgagatcct ggcggacgcc gaggcgcggg tgcccgacgc cgagcggaac
      421 ctcgacgcgt tgctggccgc ggccgaggag cgcgggcggg aggcgcggga gacccaggcg
      481 cgactggagc agcgcgaagc ggagctcgca tccttggggg tgcgcctcgc cgcccaggag
      541 gagagccagc gagcccgcga ggcggagctc aagcgcctgg agaaggaggc cgaccgcgcc
      601 ggccgccggc aggcgcggca atacctgatg gatgcgcgga agctggtgga ggaggcgctc
      661 ggggcggccc gcgcagccgg cacggcggcc gatgaggagg cggcgcgcga ggcgcggcga
      721 atggtggagc tgggcatcgg cgagcatgcg gaggtggggg agcgcgacga tgagcccgcc
      781 ccgggggcgg aagcccccgc catcgcggtg aaggcccggg ttcggctccc gagcggtggc
      841 accggcgagg tgctggagct gcgcgacgac ggcaccgcgg tcgtgacggc cggcgccatg
      901 aagatcgtgc tggaggcgtc cacgctcaca ccgctcccgc cccgcggccg ggacccctcg
      961 cgccgggaag cgcgccccgc cgggatgctc ccaccggccg acccggccgg cgcggcgctc
     1021 gaggtggacc tccgcggtct caccggtgac gaggccgagc aggcgaccat cgcggcggtg
     1081 gacgcggcgg tgctggcgga gcaaccgctg ctccggatca ttcacggcat gggcaccggc
     1141 gtggtgcgcg accgggtgcg ccgggtggtg tcgggagacc ggcgggtggc acggttcggc
     1201 tttgcgccgc ggaaccaggg cggcaccggg gtgaccatcg tcgagttttc cgcatgagca
     1261 tgatccccga cgagacggtg gaccaggtcc gcgagagcgc cgatctcctc gccctgatcg
     1321 gcgaggcggt tgagctcaag cgcaccggct cggattaccg cggcccctgt cccttccacg
     1381 gcggcaccca ccggaacttc gccgtcattc cgaagaagaa ccgctactac tgcttcgtct
     1441 gtcacgcctc cggcgacgtc ttctcctggc tgatgaagcg cttcgggatg gactacccga
     1501 cggcggtgcg cgaggccgcg cgccgcacgg gcatcgtgat tcccgagacg ccgggacgcg
     1561 cgggccccga cccgcgggag cccctgttcg gggcggcggc ggtggcgcag gactggttca
     1621 cccggcagct gctggagtcc gacgaggcgg cgggcgcgcg ggcgtatctc gaggggcgcg
     1681 agatcccgct ggagacggcg gggcagcacg ggctgggctt cgcaccggcc gggcgcgcct
     1741 tcctcaccgc gatgaaggag ctcggcgtgg acgagaaggt cctgctcgag gcggggctca
     1801 cggcgcagcg ggacgacggg aaggtggtgc cgcggttccg gtcgcggctc ctgttcccga
     1861 tccacgatct ccgcggcagg gtcgtgggct tcggggggag gctcctggtc cccggagagc
     1921 cgaagtacct caacagtccc gagacgccga tcttccacaa ggggaaacag ctctacaacc
     1981 tgcaccaggc caaggcggcg atccggaagg aggagtccgt catcctggtc gaaggctact
     2041 tcgacgtgtt ccgcctggtg ctggccggta tcgagcacgt cgtcgccccc ctcggcaccg
     2101 cgctgaccgg cgaccaggcg ggactgctcc ggcggttcgc ccgcaccgcc acgctgctct
     2161 acgacagcga tcaggccggg ctccgggcca ccttccgggc gggcgacgag ctgctgcgcc
     2221 acggcgtgcg ggtgcgcgtg gcgacgatgc cggagggcga ggacccggac agcctggtgc
     2281 ggcgcggcgg ggcggcggcg ctccagccga tcctcgacga cgggatcgac ctgctcgagc
     2341 gcaagatcca gctgctggag cggaagggct ggttcgaggg ggtagagcat cagcgcgagg
     2401 ccctggaccg cctcctgccg accattcgtg cggcggcgga tccgatcacc cgcgacctct
     2461 acctgaagac ggtcgccgag cgcacgggcg tgagccgcga ggtgctccgc gagcaggcgg
     2521 ccgcgcgggc cgccgcgccg gccgcgccgc ctcccgacgc gccgaccccg ggtcggggcc
     2581 ggccggtgag acccgcacgg cggcgcaagg cggatgcgga ggtggcggcc gagcgcctcc
     2641 ttctatgggt cctgatgcgg gaccgttcct ggatccccaa ggccg
//
LOCUS       DASUYN010000474         2677 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1692064, whole genome shotgun sequence.
ACCESSION   DASUYN010000474 DASUYN010000000
VERSION     DASUYN010000474.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2677)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2677
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1692064"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..578)
                     /locus_tag="VF061_09260"
     CDS             complement(<1..578)
                     /locus_tag="VF061_09260"
                     /EC_number="4.1.3.3"
                     /EC_number="4.2.1.41"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_process: GO:0009436 - glyoxylate catabolic process
                     [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HEX6669734.1"
                     /translation="MSPVGSRIQWGLLPAVPVPFRGDRLDGEAQRAYARWMAAHPVAG
                     VAVWAHTGRGPHLNPEQRAEVLETWREALPDRVVVAGARDITMAIEARRGRADALLAF
                     PQRSDPVGYHRRLSRELPVIAFYLYEAAGGVAYDDATLHAILELPDVIGIKVATLDSI
                     MTFQRVAAVMREHPDKLLITGEDRFLGYSLMMG"
     gene            complement(575..1366)
                     /locus_tag="VF061_09265"
     CDS             complement(575..1366)
                     /locus_tag="VF061_09265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669735.1"
                     /translation="MRTDVNAFLGSYPYRRVPGTSPEGLLEGMDRTHIDEAWVSHLPG
                     IFWRDPAAGNAWLLETSRAHSRLRPVLAVHPEVTGWEAVLRSALDAGAPAVRCDPTYY
                     GIAPAGPAMRALATACGRAGVALLLGVRLEDGRQRHPNDHAGELPAAAVRALVRADTA
                     VRLVVTHADRPFIEEVHFGSTPEEAQRIWWDISWIWGPPEDHLETLVRTIGPRRFVFG
                     TGQPLRIPENAVAKLDLLDLEDADREAIESANAAMASAARGKAGT"
     gene            complement(1366..2166)
                     /locus_tag="VF061_09270"
     CDS             complement(1366..2166)
                     /locus_tag="VF061_09270"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX6669736.1"
                     /translation="MLIDVHAHFLHDRTPRADWRERNASRLRAGERIGIDIHVASILG
                     SWGHTSPTYFPSPEDLGYGNDYLLRLQREHPDRIRGYVAVNPNYTDHALAEIRRCLDA
                     GMIGVKLAASRRADDPLLDPVCALAAERQVPVLHHIWQGRRRDYPGQEASDAIELGRL
                     AARHRSVHFILAHIGGGGDWLQTLPVIGRLPNILVDLSGSGVDGGMLEACLQAVGVER
                     LLWGCDLTIETGWAKLRYLEHILSPADLDHVRRRNAMRIFPAGAFPSD"
     gene            complement(2176..>2677)
                     /locus_tag="VF061_09275"
     CDS             complement(2176..>2677)
                     /locus_tag="VF061_09275"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX6669737.1"
                     /translation="VGGGCERFGIRPDLVVMGKAIANGFPLAVVGGRAGVMEAVSRTW
                     ISSTLATEAVSLAASRATLAVMAEAQVSAHIHRVGARLLAGLQTLAAKHERLGVRAAG
                     LPEMCFLEYRDEALSGRVALACAERGLLFKRSAYNFVSLAHDEGVVDRTLDLLDDALV
                     RVARVG"
BASE COUNT          412 a          961 c          952 g          352 t
ORIGIN      
        1 cccatcatca gcgaatagcc gaggaagcgg tcctcgccgg tgatgagcag cttgtcggga
       61 tgctcgcgca tgacggcggc cacgcgctgg aacgtcatga tggaatcgag cgtggcgacc
      121 ttgatgccga tcacgtccgg cagctccaga atcgcgtgca gggtggcatc gtcgtaggca
      181 acgcccccgg cggcctcgta gagatagaac gcgatcaccg gcagctcgcg actcaggcgg
      241 cggtgatagc ccacggggtc gctccgctgg gggaacgcga gcagcgcgtc cgccctgccg
      301 cgccgcgcct cgatcgccat ggtgatgtcg cgggcgccgg cgacgactac ccggtcgggc
      361 aatgcctcgc gccacgtctc cagcacctcg gcgcgctgct ccgggttcag gtgggggcca
      421 cgacccgtgt gcgcccacac ggccaccccc gcgaccgggt gcgccgccat ccaccgggcg
      481 taggcccgct gggcctcgcc gtccagccgg tctccgcgga acggcaccgg caccgcggga
      541 aggagccccc actggatccg ggagccgacc gggctcacgt ccccgccttc ccgcgggcgg
      601 cggaggccat cgcggcattg gcggactcga tcgcctcccg gtcggcatcc tcgagatcca
      661 gcaggtcgag cttggccacc gcgttctccg gtatccggag tggctgcccg gtgccgaaga
      721 cgaaccgccg gggcccgatg gtccggacca gggtctcgag gtggtcctcc ggcgggcccc
      781 agatccagga gatatcccac cagatccgct gcgcctcctc cggtgtgctc ccgaaatgca
      841 cctcctcgat gaacgggcgg tcggcgtggg tcacgaccag gcgcacggcg gtatcggccc
      901 tcaccagggc ccgcactgct gcggccggca gctcgcccgc gtggtcgttg gggtggcgct
      961 ggcggccgtc ctccagccgc acgccgagca ggagcgccac gcccgcacgc ccgcaggctg
     1021 tcgcaagagc gcgcatcgcc gggccggcgg gggcgatgcc gtagtaggtc ggatcgcacc
     1081 gcaccgccgg tgccccggca tccaaggcgg accgcaggac ggcctcccaa cccgtcacct
     1141 cagggtgcac ggccagcacg ggtcgcagcc tcgagtgcgc gcggctcgtc tccaacagcc
     1201 acgcgttgcc ggcggccggg tcgcgccaga agatcccggg caggtggctg acccaggcct
     1261 cgtcgatgtg cgtgcggtcc atcccctcca gcagaccctc gggcgaggtg ccgggcaccc
     1321 ggcggtacgg ataggagccg aggaaggcgt tgacgtcggt gcgcatcagt ccgaggggaa
     1381 ggcgcccgcg gggaagatcc gcatcgcgtt gcggcggcgg acgtggtcga gatccgccgg
     1441 cgacaggatg tgctccaggt agcgcagctt ggcccagccc gtttcgatgg tgagatcgca
     1501 gccccagagg agccgctcga ccccgaccgc ctggaggcac gcctccagca tcccgccgtc
     1561 cacgccgctc cccgaaagat ccaccagaat gttcggcagc ctcccgatca ccggcagcgt
     1621 ctggagccag tcgccaccgc cgccgatgtg cgccaggatg aagtgcacgg agcgatggcg
     1681 cgcggcgagc cggccgagct cgatcgcgtc cgatgcctcc tgcccgggat agtcccggcg
     1741 gcgaccctgc cagatgtggt gcagcaccgg tacctggcgc tcggcagcca gcgcgcacac
     1801 cgggtcgagg agaggatcgt cggcgcggcg gctcgcggcc agcttgacac cgatcatccc
     1861 tgcgtcgagg cagcggcgga tctcggccag cgcatgatcg gtgtagttcg gattgaccgc
     1921 gacgtaaccg cggatccggt cggggtgctc gcgctggagc cgcagcaggt aatcgttgcc
     1981 gtagcccagg tcctcgggcg aggggaaata ggtgggcgag gtgtggcccc agctgccgag
     2041 gatcgaggcg acgtggatgt cgatgccgat ccgctcgccc gcacggagcc ggctggcatt
     2101 gcgctcgcgc cagtcggccc gaggcgtgcg gtcgtggagg aaatgcgcgt ggacgtcgat
     2161 cagcacgttc ggaatctacc ccaccctcgc gacccgaacg agcgcgtcgt cgagaagatc
     2221 gagcgtacga tcgacgacac cttcgtcatg cgcgagcgag acgaagttgt aggcgctccg
     2281 cttgaagaga aggcctcgct cggcgcaggc cagggcgacc cgcccggaca gggcctcgtc
     2341 gcgatactcg aggaagcaca tctcgggaag gccggcggcg cgcacgccga ggcgctcgtg
     2401 cttcgcggcc agcgtctgaa gtcccgcgag gagccgggcg cccacccggt gaatgtgggc
     2461 gctgacctgg gcctcggcca tcaccgccag cgtcgcccga gaggccgcga gcgacaccgc
     2521 ctccgtcgcg agcgtcgagg agatccaggt gcgggacacc gcctccatca ccccggctcg
     2581 gccgccgacc accgcgagcg gaaagccgtt ggcgatggcc ttgcccatca cgacgagatc
     2641 cggccggatg ccgaagcgct cgcacccgcc gcccacc
//
LOCUS       DASUYN010000475         7633 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1914122, whole genome shotgun sequence.
ACCESSION   DASUYN010000475 DASUYN010000000
VERSION     DASUYN010000475.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7633)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7633)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7633
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1914122"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..432
                     /locus_tag="VF061_09280"
     CDS             <1..432
                     /locus_tag="VF061_09280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX6669738.1"
                     /translation="FVFQFHHLLREFTALENVMLPLLIAGEDDARARSRAEELLAAVG
                     LAGRMSHRPAALSGGEQQRTAVARALAADPLVVLADEPSGNLDAANSERLHQLFGRLS
                     REFETALVVVTHNRSLAARADRVLSLEGGRLVPLASVELMP"
     gene            433..927
                     /locus_tag="VF061_09285"
     CDS             433..927
                     /locus_tag="VF061_09285"
                     /inference="COORDINATES: protein motif:HMM:NF014232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrB/UvrC motif-containing protein"
                     /protein_id="HEX6669739.1"
                     /translation="MSCDQCHEREAVIHLTQIVNEQVTTLHLCERCAAEKGVESPGGV
                     AKTPLGSFLAAMGQDLSESVPVARTGETCSRCGASLQDFRESGRLGCPECYRSFEVPL
                     RDLLRRLHGSTHHMGERYAERDGEAADGKQQTAELREQLRLAVETENFELAAELRDRL
                     RVLE"
     gene            924..2006
                     /locus_tag="VF061_09290"
     CDS             924..2006
                     /locus_tag="VF061_09290"
                     /inference="COORDINATES: protein motif:HMM:NF012443.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein arginine kinase"
                     /protein_id="HEX6669740.1"
                     /translation="MIDLSLLTDGGVGWLDASGPSSHLVLSTRIRLARNLAGRVFQGR
                     NSETEREDILVTVERAARESVLLRQATRFRLDRLDRTDRQLLHERHLVSKELAGLDGD
                     GRVRSGASLLVQDRIGVMLNEEDHLRIQGLHSGFALEAAYAEVDRLDSELGQRLAFAF
                     HPEFGYLTSCPTNVGTGLRASVLIHLPGLVLTKEISKVLQGLAQVGLTFRGLYGEGSE
                     VVGNFFQLSNQTTLGSSEHELLDHLGKMVRQVMDYEEQARQVLLRDAPAIIEDKVWRA
                     YGLLRYARSLSFEEAMNLLSGVRLGVGVNLIPDVGMYTLNKLLVYTQPAHLAVAEGVA
                     PTEADLPIRRARFVRKVLESEVGRRG"
     gene            2051..4525
                     /locus_tag="VF061_09295"
     CDS             2051..4525
                     /locus_tag="VF061_09295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit"
                     /protein_id="HEX6669741.1"
                     /translation="MNGYNFTDRVRKVLQMAREEAARLHHEYVGTEHILLGLIREGEG
                     VAAAVLTNLNVDLEDIQQKIEETVKKGKAAAAAGPDLPYTSRAKKVLELAMTEARELN
                     HSYVGTEHLLLGLLREEKGIAAQVLTDAGVNLEQSRAETLRLLGSDMPQASAGSTGGQ
                     PSAAPKSEKKSKTPALDHFCRDLTQLGAEGQLDPTIGRAKEIERVMEILARRKKNNPV
                     LIGEPGVGKTAIVEGLALLIANGLCPDVLRDHRVLSLDMAAVIAGTKYRGQFEERLKA
                     VMNEIAQNKQIILFIDELHTLVGAGAAEGAIDASNMLKPALARGELQCVGASTLNEYR
                     KYIEKDGALERRFQTVVVEPPTVPETVEILKGLRKKYEDHHRISIPDATLAAAAELSE
                     RYITDRFLPDKAIDVIDEAGARARLASQVPPAEVAELKTALEKVNLQKEDAVRDQNFE
                     RAASLRDQERDLQNQIRLKQEEWEKDRQTRRPVIDEEAIAFIVSRWTGIPVTRLQEAE
                     TARLMRMEDELHGSVVGQDEAIVAVSRAIRRSRAGLKDPNRPIGSFIFSGPTGVGKTE
                     LARALAKFLFADAQALIRVDMSEYMEKFSVSRLIGAPPGYVGYEDSGTLTKAVRRKPY
                     SVVLLDEIEKAHPDVFNILLQVLDEGHLTDNYGRVIDFKNTVVIMTSNVGARDIMSGK
                     SLGFHTADTKSNFEKMQERIKDEMQKVFNPEFLNRLDDVIVFHPLSKEHIAQIVTILL
                     KEVQRRLGDEVRLTQAAIDFLVQKGYDENYGARPLKRAIQKFVEDPLSEKILLGEFGR
                     GDEIEVDVAPDGERLVFRALTGTQAT"
     gene            4585..6981
                     /gene="bamA"
                     /locus_tag="VF061_09300"
     CDS             4585..6981
                     /gene="bamA"
                     /locus_tag="VF061_09300"
                     /inference="COORDINATES: protein motif:HMM:TIGR03303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HEX6669742.1"
                     /translation="MQRFRIVRAAVALLLGGPAALAAQEPQAEPEAPPIVDSIVVEGN
                     SRLTPSQIIGTAGLVVRQPVNYRDIQRAITNLFRTGQFDDVLVEQRTAGEKLVLALKV
                     KERPVLERWAVRGVDRVSEGSVKGRVKLVEGRPLDRNAVEQSRASIDSLYQEAGYYAA
                     EIKTLELPQDGGRVRIVYDVNEGSRVAISQVTVEGNRRFSDRTVVKQMSTRPEGFWWF
                     RSGEYDEDKLEQDVREKLPGWYANRGFVDFQVTGDSLAADSAEGKATLHLTVDEGPQY
                     SVGTFDIEGNRRFSTDELMANFPFGPLDPGGAPAGTRRPFNRSEWDAATEKVGNLYAN
                     NGYIYAQVVPEETRRTAPDGTPVIDLGWTIREGSPATINKIEIVGNDVTHERVIREAI
                     VMLPGDLFSRDRLIRSYQNVSNLGFFQQPMPSPDVRPSENGVDVDIVFRVEERRTGNI
                     NFGASLGQGTGVGGFLGLEEPNLFGRGKRGQLQWQFGKNINDFTLSYTDPNIRESRIS
                     GTVSLFDSRARFTVGDLGRRKQTGGSVRLGFPFFGSRYTRLFTSYSYQRIRYSEGSDD
                     LRERFRCTSCTRSSLGTSLLRDTRFGLPFATGGALTQVSGELNGGILGGTGNYRKVDL
                     EGRWYAPLGTMGGDGEFGGGVQFVLGITAKSGFIFGDAGPFFTELYSLGGVQFGIPLR
                     GYDEFAITPNGFDPQASGNQASPDAFGKSFAAFTVEAGARVSQSLYASAFFDAGNVYR
                     SARQWDPTRLFRGAGFGAAVISPLGPIGVDIGYGFDRVDGSGRPNPGWQLHFKLGNFF
                     "
     gene            7120..>7633
                     /locus_tag="VF061_09305"
     CDS             7120..>7633
                     /locus_tag="VF061_09305"
                     /inference="COORDINATES: protein motif:HMM:NF015871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HEX6669743.1"
                     /translation="MKRFVVVGAWIAALTLLGSGPAAAQQSGGNKVAYVNTQAILKAT
                     PGYAAAESTFTREIETYRVEVQKLQASLDSAASDFEQKSVMLSPTQREAKRKELTGQQ
                     QKLEQRTQELQQKAATRERELLDPIQTKVNSVIEGVRAAGNYAVIFDVSAPNSGIVTA
                     DKSLDLTQRVI"
BASE COUNT         1288 a         2550 c         2674 g         1121 t
ORIGIN      
        1 ttcgtgttcc agtttcacca tctgctccgg gagttcaccg cgctggagaa cgtgatgctg
       61 ccgctgctga tcgccggaga ggacgatgcc agggcccgct cgcgggcgga ggagctgctc
      121 gcggctgtcg gcctcgccgg gcgaatgtcc caccgtccgg cggcgctctc gggtggggag
      181 cagcagcgga cggcggtggc gcgggccctg gcggcggacc cgctggtggt gctggcggat
      241 gagccgtcgg ggaacctcga cgcggccaac agcgagcggc tgcaccagct cttcgggcgg
      301 ctgtcgcgcg agttcgagac ggccctggtg gtggtcactc acaaccggag cctggcggcc
      361 cgcgccgatc gggtgctgtc gctggaaggc gggcggctgg tgccgctcgc cagcgtggag
      421 ctgatgccct agatgtcctg cgaccaatgc cacgagcgtg aggcggtcat tcatctcacc
      481 cagatcgtca acgagcaggt gacgaccctg catctctgcg agcgctgcgc ggcggagaag
      541 ggggtggaga gcccgggtgg cgtggcgaag acgccgctcg gcagctttct cgcggcgatg
      601 ggccaggatc tgtcggagtc ggttccggtc gcgcgcaccg gcgaaacctg ctcccgctgc
      661 ggggcctcgc tccaggactt ccgggagagc ggccggctcg gctgtccgga gtgctaccgc
      721 tccttcgagg tgccgctccg tgacctcctc cgccggctgc acggctccac ccaccacatg
      781 ggcgagcgct acgccgagcg cgacggggag gcggcggacg ggaaacagca gaccgcggag
      841 ctgcgggagc agcttcggct ggcggtggag accgagaact tcgagctcgc cgccgagctg
      901 agggaccgac tgcgggtact ggaatgatcg acctgagcct tctgaccgac ggcggcgtcg
      961 gctggctgga cgccagcggg ccctccagcc acctggtgct ctccacccgg atccgcctgg
     1021 cccggaacct ggcgggacgc gtgttccagg ggcgcaattc cgagaccgag cgggaggaca
     1081 tcctggtcac ggtggagcgg gccgcgcgcg agtcggtgct gctccgccag gcgacccggt
     1141 tccgactcga ccggttggac cgcaccgacc gccagttgct gcacgagcgg cacctggtga
     1201 gcaaggagct ggcgggcctg gacggcgacg gacgggtccg ctcgggggcc tcgctgctgg
     1261 tccaggaccg gatcggggtc atgctgaacg aggaggacca cctccggatc caggggctgc
     1321 attcgggctt cgcgctggag gcggcctacg ccgaggtcga ccggctggac tccgaactgg
     1381 gacaacgact tgctttcgca tttcaccccg agttcggtta tcttacctcg tgcccgacca
     1441 acgtgggcac cgggttgaga gcctcggtgc tcatccacct ccccggcctg gtgctcacca
     1501 aggaaatctc gaaggtgttg cagggcctgg cccaggtggg gctcaccttc cggggcctgt
     1561 atggagaggg aagcgaagtc gtcgggaatt tcttccagct gtccaaccag acgaccctgg
     1621 gcagctccga gcacgagttg ctggatcacc tgggcaagat ggttcgccag gtcatggact
     1681 acgaggagca ggcgcggcag gtcctgctgc gcgacgctcc ggcgatcatc gaggacaagg
     1741 tctggcgcgc ctacggcctc ctccggtacg ccaggtcgct ctcgttcgag gaggccatga
     1801 acctgttgag cggggtccgg ctgggcgtcg gggtcaacct gattcccgac gtcgggatgt
     1861 acaccctcaa caagctgctg gtctataccc agccggccca cctggccgtg gcggagggag
     1921 tggcgccgac cgaggccgac ctgccgattc ggcgggcacg gttcgtgcgc aaggtgttgg
     1981 aatccgaagt ggggcgccgc ggatgagccg tggcgacggc tttcggtagt gagctacgtg
     2041 gggcaccgcg atgaacggct acaacttcac tgatcgggtc cgcaaggtcc tgcagatggc
     2101 gcgggaagag gcggcacgtc tgcatcacga gtacgtcggg accgagcaca tcctgctcgg
     2161 tctcatccgc gagggtgagg gcgtcgccgc cgcggtcctc accaacctca acgtcgacct
     2221 cgaggacatc cagcagaaga tcgaggagac ggtcaagaag gggaaggcgg ccgcggccgc
     2281 cgggcccgac ctgccgtaca cctcgcgggc caagaaggtc ctcgagctgg ccatgaccga
     2341 ggcgcgcgag ctgaaccact cctacgtcgg gaccgagcac ctgctgctcg gcctcctgcg
     2401 cgaggagaag ggcatcgccg cccaagtgct caccgacgcc ggcgtcaacc tggagcagtc
     2461 ccgcgccgag acgctgcgcc tgctcgggag cgacatgccg caggcctcgg ccggcagcac
     2521 cggcggccag cccagcgcgg cgcccaagtc ggagaagaag tccaagaccc cggccctcga
     2581 ccacttctgc cgcgacctca cccagctcgg cgccgagggc cagctcgatc ccacgatcgg
     2641 gcgggccaag gagatcgagc gggtcatgga gatcctcgcc cgccggaaga agaacaaccc
     2701 ggtgctgatc ggggagccgg gcgtgggcaa gaccgccatc gtcgaggggc tcgcgctcct
     2761 catcgccaac ggcctctgcc ccgacgtgct gcgggatcac cgggtgctct cgctcgacat
     2821 ggccgcggtc atcgccggca ctaagtaccg gggccagttc gaggagcggc tcaaggcggt
     2881 gatgaacgag atcgcccaga acaagcagat catcctgttc atcgacgagc tgcacaccct
     2941 ggtgggcgcc ggcgccgccg aaggcgcgat cgacgcgtcc aacatgctga agcccgccct
     3001 ggcgcggggc gagctccagt gcgtgggcgc ctcgaccctg aacgagtacc ggaagtacat
     3061 cgagaaggac ggcgcgctcg agcgacggtt ccagacggtc gtggtcgagc cgcccacggt
     3121 gccggagacg gtggagatcc tgaagggcct ccggaagaag tacgaggacc accaccggat
     3181 cagcatcccc gacgcgacgc tcgccgccgc ggcggagctc tcggagcggt acatcactga
     3241 ccggttcctc cccgacaagg cgatcgacgt gatcgacgag gcgggcgcgc gcgcgcgcct
     3301 ggcgtcgcag gtgccgcccg cggaagtggc cgagctcaag accgcgctgg agaaggtcaa
     3361 cctccagaag gaagacgccg ttcgcgacca gaacttcgag cgggccgcgt ccctgaggga
     3421 ccaggagcgc gacctgcaga accagatccg gctcaagcag gaggagtggg agaaggaccg
     3481 gcagacccgc cgcccggtga tcgacgagga ggccatcgcc ttcatcgtct cccgctggac
     3541 cggcatcccg gtcacccggc tccaggaggc ggagaccgcg cggctcatgc ggatggagga
     3601 cgagctgcac ggctcggtgg tggggcagga cgaagccatc gtggccgtgt cccgcgccat
     3661 ccggcgctcc cgggcggggc tcaaggatcc caaccggccg atcggttcct tcatcttctc
     3721 cggccccacc ggcgtcggga agacggagct cgcgcgggcg ctggcgaagt tcctgttcgc
     3781 cgacgcgcag gcgctcatcc gggtggacat gtcggagtac atggagaagt tctcggtcag
     3841 ccggctcatc ggcgcgcccc cgggctacgt ggggtacgag gactccggca ccctgaccaa
     3901 ggcggtgcgg cgcaagccct actcggtcgt cctcctggac gagatcgaga aggcgcaccc
     3961 ggacgtgttc aacatcctgc tccaggtcct cgacgagggt cacctgaccg acaactacgg
     4021 ccgggtgatc gacttcaaga acacggtcgt gatcatgacg tccaacgtgg gtgccaggga
     4081 catcatgtcg ggcaagtccc tcggcttcca cacggcggac accaagtcga acttcgagaa
     4141 gatgcaggag cggatcaagg acgagatgca gaaggtgttc aacccggagt tcctgaaccg
     4201 gctggacgac gtcatcgtgt tccacccgct ctcgaaggag cacatcgccc agatcgtcac
     4261 catcctgctc aaggaagtgc agcggcgcct cggcgacgag gtccggctca cccaggccgc
     4321 gatcgacttc ctggtccaga agggctacga cgagaactac ggcgcccggc cgctcaagcg
     4381 ggcgatccag aagttcgtcg aggatccgct cagcgagaag atcctgctgg gcgagttcgg
     4441 ccggggcgac gagatcgagg tggacgtcgc gcccgacggc gagcggctgg tcttccgggc
     4501 gctgaccggg acccaggcca cctgacgtcg ccggcgccgg cccccccatc cgggggccgg
     4561 cgcgcccacc ctcaccccgt gctgatgcag cgtttccgta tcgtccgcgc cgccgtcgct
     4621 ctcctgctgg ggggaccggc ggcgctcgct gcccaggagc cgcaggccga gcctgaggcg
     4681 ccgcccatcg tggacagcat cgtcgtcgag ggcaacagcc ggctcacccc ctcccagatc
     4741 atcggcaccg ccgggctcgt cgtccggcag ccggtcaact accgggacat ccagcgggcc
     4801 atcaccaatc tcttccgcac gggtcagttc gacgacgtgc tggtggagca gcgcacggcc
     4861 ggcgagaagc tggtcctggc gctcaaggtg aaggagcgac cggtgctgga gcgctgggcc
     4921 gtccgcggcg tcgaccgggt ctccgaggga tcggtgaagg gccgcgtcaa gctggtcgag
     4981 ggccgcccgc tggaccggaa cgccgtggag cagtcccgcg cctcgatcga ctcgctctac
     5041 caggaggcgg gctactacgc cgcggagatc aagacgctgg agctgccgca ggacgggggc
     5101 cgcgtccgga tcgtgtacga cgtcaacgag ggcagtcggg tcgccatcag ccaggtgacc
     5161 gtggagggca accggcgctt ctccgaccgg accgtggtga agcagatgtc cacccggccc
     5221 gagggcttct ggtggttccg gagcggcgaa tacgacgagg acaagctgga gcaggacgtg
     5281 cgcgagaagc tgcccggctg gtacgccaac cgcggcttcg tggacttcca ggtcaccggc
     5341 gattcgctcg ccgccgacag cgccgaaggc aaggcgacgc tccacctcac cgtggacgag
     5401 ggtccccagt attcggtggg cacgttcgac atcgagggga atcgccggtt ctccaccgac
     5461 gagctgatgg ccaacttccc gttcggcccg ctggacccgg gcggcgcgcc cgcgggtacc
     5521 cgccggccgt tcaaccggtc ggagtgggat gccgccaccg agaaggtggg gaatctctac
     5581 gccaacaacg gttacatcta cgcccaggtg gtgccggagg agacccggcg caccgcgccg
     5641 gacggcacgc ccgtcatcga cctcggctgg accatccggg agggctcgcc cgccaccatc
     5701 aacaagatcg agatcgtcgg gaacgacgtc acccacgagc gggtgatccg cgaggcgatc
     5761 gtgatgctgc ccggcgacct gttcagccgc gaccggctga tccgctcgta tcagaacgtc
     5821 tccaacctcg gcttcttcca gcagccgatg ccgtccccgg acgtgcggcc gtcggagaac
     5881 ggggtggacg tggacatcgt gttccgggtg gaggagcgcc gcaccggcaa catcaacttc
     5941 ggggcgtcgc tggggcaggg caccggtgtc ggcgggttcc tggggctgga ggagccgaac
     6001 ctcttcgggc gcggcaagcg gggccagctc cagtggcagt tcgggaagaa catcaacgat
     6061 ttcaccttga gctacaccga ccccaacatc cgcgagagcc ggatctcggg cacggtgtcc
     6121 ctcttcgaca gccgggcccg gttcaccgtc ggcgatctcg gccggcggaa gcagaccggc
     6181 ggctcggtgc ggctgggctt ccccttcttc ggctcgcgct acacccggct gttcacctcg
     6241 tattcctacc agcggatccg gtacagcgag ggctccgacg acctgcggga gcggttccgg
     6301 tgcaccagtt gcacccgctc ctccctcggc accagcctgc tgcgagacac ccggttcggc
     6361 ctcccgttcg ccaccggcgg cgccttgacg caggtcagcg gggagctcaa cggcggtatc
     6421 ctcgggggga caggcaatta ccggaaagtg gacctggagg ggcgctggta cgcgcccctg
     6481 ggcacgatgg gcggggatgg cgagttcggc ggcggggtac agttcgtgct tgggatcacc
     6541 gccaagtccg gcttcatctt cggggatgcc ggaccgttct tcacggagct ctattcgctg
     6601 ggcggggtgc agttcgggat cccgctccgg ggctacgacg agttcgccat cacgcccaac
     6661 gggttcgacc cccaggcgag cggcaaccag gcgagcccgg acgcgttcgg caagtcgttc
     6721 gccgccttca cggtggaggc gggtgcgcgg gtcagtcagt ccctgtacgc gagtgcgttc
     6781 ttcgacgccg gaaacgtcta tcgttcggcg cggcagtggg accccacccg gctcttccgc
     6841 ggggcgggct tcggtgcggc ggtcatctcg ccgctggggc cgatcggggt cgatatcggc
     6901 tacgggttcg accgggtgga cggcagcggc cgccccaatc ccggttggca gctgcacttt
     6961 aagttgggaa acttcttctg agcccccgcc taggagaagc gtgaaacgtg aacggtgaaa
     7021 cgtgaaatga aatgcccgac acaccatttc accgttcacc ttccacgctt ttccaggtgg
     7081 gaactcggcg gcaacattga cctcaatctg gagccaagca tgaagcggtt tgtcgtcgtg
     7141 ggagcctgga tcgcagccct caccctgctg gggagcggcc ctgccgcggc gcagcagagc
     7201 ggcgggaaca aggtcgccta cgtcaacaca caggccatcc tcaaggcgac gcccggatac
     7261 gccgcggccg agtccacctt cacccgcgag atcgagacct accgggtgga ggtccagaag
     7321 ctccaggcga gcctcgactc cgccgcctcg gacttcgagc agaagtcggt catgctgagc
     7381 cccacccagc gtgaggccaa gcggaaggag ctcaccggcc agcagcagaa gctcgagcag
     7441 cggacccagg agctgcagca gaaggccgcg acccgggagc gcgagctgct cgatcccatc
     7501 cagaccaagg tcaacagcgt gatcgagggg gtccgcgcgg cgggcaatta cgccgtcatc
     7561 ttcgacgtga gcgcacccaa cagcgggatc gtgaccgccg acaagtcgct ggacctcacc
     7621 cagcgcgtca ttc
//
LOCUS       DASUYN010000476         2218 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1915148, whole genome shotgun sequence.
ACCESSION   DASUYN010000476 DASUYN010000000
VERSION     DASUYN010000476.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2218)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2218)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2218
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1915148"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            137..1450
                     /locus_tag="VF061_09310"
     CDS             137..1450
                     /locus_tag="VF061_09310"
                     /inference="COORDINATES: protein motif:HMM:NF037360.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669744.1"
                     /translation="MRRRFYLHCMGSLRSLQGLGDSLPGLDRYAERALLLATEGDVVC
                     VPKPVDAGYLEYLAGLGIGPRPEHIVVPDGNGRCADRPLAERLLGAPGVLSQAARAVR
                     AAEVTIEPYAATPEVMALAEVLERDSGIPVRVDGSPRITRYADQKHHMRAKAQELGIP
                     VADGEVAELTFAGGRRRRDLEPVRAAIERQLRHTGRVIVRGASGASGSSTFVVGRGGE
                     DTNGVLRRIASRSDNRTYLVEAMVEAAVSPNLQIRVPADDGPLVSVGVTDQRWTRGLT
                     HAGNQLPSSARTVDAMDAWARMLATWMRGQGYSGLVGFDFVEFRDPVTGGLRTILAEV
                     NPRVNGGTYPLAVRARLNEAATRSGRPPAPAFVSGTVDTRAASFRRVKAAIGHLLFDP
                     DRGTGVVPYATGCLEHGKCAMVALAGSRLRAAELYGAAQARLEAA"
     gene            1447..>2218
                     /locus_tag="VF061_09315"
     CDS             1447..>2218
                     /locus_tag="VF061_09315"
                     /inference="COORDINATES: protein motif:HMM:NF019850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase family protein"
                     /protein_id="HEX6669745.1"
                     /translation="MSGSLIAGSYRRLQRTRALRHRRRVAGVTFIAVTGSAGKTTTKD
                     LIAAVLASRHRGSKSPGTHNTSHWVSHTVLGARRGDGFCVHELGATGPGSLDEPIAIV
                     RPRVAVVTNVGGDHRSAFRTLEATAAEKAKVVHAVPRAGFAVLNADDPRVLAMAGSCR
                     GRVLTYGLRPDATVHAESVYSSWPDRLTFTAIHGEQRVAVHTRFCGVHWIHACLAAIT
                     TGIGLGVPLPVAAAALAAVDPLPGRYQPVEANGVTFIRD"
BASE COUNT          271 a          819 c          825 g          303 t
ORIGIN      
        1 tccccttcga gtccaccggg aagctgcgtc cctcgcgctc gctggtgcac tccgagttcg
       61 accgcctccg gttcgagtcc gtggagcccg ctcgccgggc ccgccccggc ctcggcgcct
      121 gacggcgacc gcgcccgtgc gccgacggtt ctacctccac tgcatgggct cgttgcgctc
      181 gctccagggc ctgggcgatt cgctgccggg cctggaccgc tacgcggagc gggcgctgct
      241 gctggcgacc gagggcgacg tggtgtgcgt gccgaagccg gtggacgccg gctacctcga
      301 gtacctcgcc ggcctcggca tcggcccgcg cccggagcac atcgtcgtgc ccgacggcaa
      361 cggccgctgc gcggatcgcc cgctggccga gcggctgctg ggtgctcccg gcgtgctgag
      421 ccaggcggca cgcgcggtac gcgcggccga agtgacgatc gagccctacg cggccacgcc
      481 cgaggtgatg gcgctggccg aggtgttgga gcgggacagc ggtatcccgg tgcgggtgga
      541 cggctcgccc cggatcacgc gctacgccga ccagaagcat cacatgcgcg ccaaggcgca
      601 ggagctgggg atcccggtgg cggacggcga ggtggcggag ctgacctttg ccggcggcag
      661 gcgccgccgc gatctcgagc cggtgcgcgc ggcgatcgag cggcagctcc gtcataccgg
      721 ccgggtgatc gtacgcggcg cgtcgggcgc ctcgggctcg tccacgttcg tggtggggcg
      781 cgggggggag gacaccaacg gcgtgctccg ccggatcgcg tcccgcagcg acaatcggac
      841 ctacctggtg gaggcgatgg tcgaggccgc ggtgtccccc aacctgcaga tccgggtgcc
      901 cgcggacgac ggcccgctgg tgagcgtcgg cgtgaccgac cagcgctgga cccgcggtct
      961 cacccatgcc ggcaaccagc tcccctcctc ggcgcggacg gtggatgcga tggacgcctg
     1021 ggcccgcatg ctcgcgacct ggatgcgcgg gcaggggtat tcgggactgg tgggcttcga
     1081 cttcgtcgaa tttcgcgatc ccgtgaccgg cggcctccgc accatcctcg cggaggtgaa
     1141 ccctcgggtg aacggcggga cttatccgct cgcggtgcga gcccggctca acgaggctgc
     1201 gacgcgctcg gggcgcccgc cggcgccggc gttcgtctcg gggacggtgg acacccgggc
     1261 ggcgagcttc cgcagagtga aggccgcgat cggccacctc ctcttcgacc cggaccgcgg
     1321 caccggcgtg gtcccctacg ccactggctg cctggagcac gggaagtgcg cgatggtcgc
     1381 gctggcgggc tcgcgcctcc gggccgcgga gctctacggg gccgcccagg cgcgcctgga
     1441 ggcggcatga gcggctcgct catcgcgggc tcctaccgcc ggctccagcg cacccgcgcg
     1501 ctgcggcacc gccgtcgcgt cgccggcgtc accttcatcg cggtgaccgg cagcgcgggc
     1561 aagaccacca ccaaggacct gatcgcggcg gtgctcgcga gccgccaccg cggcagcaag
     1621 agcccgggca cccacaacac ctcgcactgg gtcagccaca ccgtgctcgg cgcccggcgg
     1681 ggcgacggct tctgcgtgca cgagctgggc gcgaccgggc cgggcagcct cgacgagccc
     1741 atcgccatcg tgcgcccgcg ggtcgcggtc gtcaccaacg tgggcggcga ccaccggagc
     1801 gcgttccgca cgctggaggc gacggcggcg gagaaggcca aggtggtcca tgcggtcccg
     1861 cgcgcgggat tcgccgtgct caatgccgac gatccccggg tgctcgcgat ggcgggcagc
     1921 tgccgcggac gcgtcctgac ctacgggctc cggcccgacg ccaccgttca cgccgagtcg
     1981 gtgtacagct cctggcccga ccggctcacg ttcaccgcca ttcatggcga gcagcgcgtg
     2041 gccgtgcata cccggttctg cggggtgcat tggatccacg cctgtctcgc cgccattacc
     2101 accgggatcg ggctgggtgt gccgctcccg gtcgccgccg ccgcgctggc ggcggtggat
     2161 ccgctccccg gccggtacca gccggtcgag gccaacggcg tgaccttcat ccgggacg
//
LOCUS       DASUYN010000477         2149 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_809716, whole genome shotgun sequence.
ACCESSION   DASUYN010000477 DASUYN010000000
VERSION     DASUYN010000477.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2149)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2149)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2149
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_809716"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..303)
                     /locus_tag="VF061_09320"
     CDS             complement(<1..303)
                     /locus_tag="VF061_09320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669746.1"
                     /translation="MIRSIGAALALFVGGTALTIPRGTDIPVTLDEDVPIEQERVGDA
                     FEAHVTRDVVVDGEVVIPAGSPAEVKLVKSPEKEGAATLRLSRINVDGDMRSVNTEV"
     gene            516..2069
                     /locus_tag="VF061_09325"
     CDS             516..2069
                     /locus_tag="VF061_09325"
                     /EC_number="6.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016874 - ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA carboxylase subunit beta"
                     /protein_id="HEX6669747.1"
                     /translation="MSDPRQLLEQLHHRQSLAEQGGGPARIAQQHRKGKLTARERLDL
                     LLDEGSFVELDRFVTHRSTDFGLDRHVVPGDGVVTGYGRVEGRLVYVFSQDFTVFGGS
                     LSEAHAEKICKVMDLAVRNGAPVVGLNDSGGARIQEGVASLGGYADIFLRNTLASGVV
                     PQISAILGPCAGGAVYSPAITDFIFMVRGVSYMFVTGPNVVKTVTHEEVTFDDLGGAD
                     VHGGTSGVSHFTHDSEPECLQAIRRLLGFLPLNNLDDPPERATEDPGDRRDEALLDLV
                     PDSPTKPYDMHEVVGRVVDDGEFLEVQRGYADNIITGFARLGGRPVGVVANQPAVLAG
                     VLDINASLKAARFIRFCDCFNLPVVTFVDVPGFLPGVTQEHGGIIKHGAKLLYAYCEA
                     TVPKLTVITRKAYGGAYDVMSSKHIRGDLNLAWPSAEIAVMGPRGAVEILFKDEIAKA
                     PDPAAATARLIEEYTAKFAHPYAAAARGYIDDVIDPRDTRPRLIDALRTLRTKRDRNP
                     PRKHGNLPL"
BASE COUNT          325 a          781 c          720 g          323 t
ORIGIN      
        1 gacctcggtg ttgaccgacc gcatgtcgcc gtccacgttg atccgggaca gccgcagcgt
       61 ggcggcgccc tccttctccg ggctcttcac cagcttgacc tccgccggcg agccggcggg
      121 aatcacgact tcgccgtcca cgaccacgtc gcgggtcacg tgggcctcga acgcgtcgcc
      181 cacgcgctcc tgctcgatcg gcacgtcctc atccagcgtc acggggatgt cggtgccgcg
      241 aggaatcgtg agggcggtgc cgccgacgaa cagtgcgagc gccgcgccga tgcttcgaat
      301 catgtgacct cccggtatct cggttaatcg accgaagcct atatatcccc tgccgggtgg
      361 gggctcggga gcggggatcg cagcggggac gtggccgaag tcacgtccag ggccgatgcc
      421 cttgcggcac ctgccgatac gggcgcggcg cgggggcgca ggtgatccgt gtcaccggct
      481 gccccggggc gccggcgcgc gctatcttgt cagccatgtc cgacccccgg cagctcctcg
      541 agcaactcca ccatcgccag tcgctcgccg aacagggcgg gggacccgcc cgcatcgccc
      601 agcagcaccg gaaaggcaag ctcaccgccc gcgagcggct cgacctgctg ctcgacgagg
      661 gcagcttcgt cgagctggac cggttcgtca cccaccgctc caccgacttc ggcctcgacc
      721 ggcatgtggt cccgggcgac ggcgtcgtca ccggctacgg gagggtggag ggccgcctgg
      781 tctacgtctt ctcccaggat ttcaccgtct tcgggggctc gctcagcgag gcgcacgcgg
      841 agaagatctg caaggtgatg gacctcgccg tgcggaacgg cgcaccggtg gtggggctca
      901 acgactccgg cggcgcgcgg attcaggagg gtgtggcctc cctcggcggc tacgccgaca
      961 tcttcctccg caacaccctg gcgtcggggg tggtgccgca gatcagtgcc atcctcggcc
     1021 cctgcgccgg cggcgcggtg tacagccctg cgatcaccga cttcatcttc atggtgcgcg
     1081 gggtgagcta catgttcgtc accggcccca atgtggtgaa gacggtgacg cacgaggagg
     1141 tgaccttcga cgacctcggt ggggcggacg tccacggcgg caccagcggc gtgtcgcatt
     1201 tcacccacga cagcgagccc gagtgcctcc aggcgatccg ccggctcctc ggcttcctcc
     1261 ccctcaataa cctcgacgac cccccggagc gcgccaccga ggatcccggc gaccggcggg
     1321 acgaggcgct tctcgacctg gtgcccgaca gccccaccaa gccctacgac atgcacgagg
     1381 tcgtgggccg ggtggtggac gacggcgagt tcctcgaggt gcagcgcggt tacgcggaca
     1441 acatcatcac cggcttcgcg cggctgggcg gccggccggt gggggtggtc gcgaaccagc
     1501 cggcggtcct cgccggggtg ctggacatca acgcgtcgct caaggcggcc cggttcatcc
     1561 ggttctgcga ctgcttcaac ctgccggtgg tgaccttcgt ggacgtgccc gggttcctcc
     1621 ccggggtcac ccaggagcac ggcggcatca tcaagcacgg cgccaagctg ctctacgcct
     1681 actgcgaggc gaccgttccc aagctcacgg tcatcacccg caaggcctac ggcggggcgt
     1741 acgacgtcat gagctccaag cacatccgcg gcgacctcaa cctggcctgg ccttcggcgg
     1801 agatcgccgt gatgggcccc aggggcgcgg tggagatcct cttcaaggac gagatcgcca
     1861 aggcgcctga tcccgccgcc gccaccgccc ggctgatcga ggagtacacc gcgaagttcg
     1921 cgcacccgta cgccgccgcg gcgcgaggct acatcgacga cgtgatcgac ccccgcgaca
     1981 cccggccccg gctgatcgac gcgctccgga cgctccggac caagcgggac cgcaacccgc
     2041 ccagaaagca cggcaacctt ccactctgag gcgtggggcg ggtcgcgcct cagccgtccc
     2101 ctcctgtggg ccaggtcccc tagccaaggg ccggcgggca tatcatctt
//
LOCUS       DASUYN010000478         7366 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_372433, whole genome shotgun sequence.
ACCESSION   DASUYN010000478 DASUYN010000000
VERSION     DASUYN010000478.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7366)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7366)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7366
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_372433"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..192
                     /locus_tag="VF061_09330"
     CDS             <1..192
                     /locus_tag="VF061_09330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEX6669748.1"
                     /translation="LDTTDGNLSVHARKLEEADYVVCTKSFEGRVPRTEYRLSPQGRR
                     ALERYLEHMEALIRATRER"
     gene            219..932
                     /locus_tag="VF061_09335"
     CDS             219..932
                     /locus_tag="VF061_09335"
                     /EC_number="2.5.1.31"
                     /inference="COORDINATES: protein motif:HMM:NF011412.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="di-trans,poly-cis-decaprenylcistransferase"
                     /protein_id="HEX6669749.1"
                     /translation="MEQSTLHVGIIMDGNGRWASREGRPRAEGHRAGARAVRQVVEAA
                     PGCGVGVLTLYAFSADNWRRPSAEVRALMRLFREYLRAETTRCVESGVRLEVIGRRDR
                     LDPHLHRRILAAEQATAGGTRLHLRLAVDYSSRDAILRAAQCLRPGAGPTRDAFGRLL
                     AIVDHGTPVPPLDLLIRTGGERRLSDFMLWEAAYAELCFIDRMWPDFGAAELTAAVRD
                     FGARERRFGGLGPVAADAS"
     gene            1008..1274
                     /locus_tag="VF061_09340"
     CDS             1008..1274
                     /locus_tag="VF061_09340"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HEX6669750.1"
                     /translation="MNHRISCSETLLRLDDFVDRELSPEDLELVEEHLLECVQCAEKF
                     RFETSLVGALRERLARIAVPETLLRRIRERLAEAPPSEGGPAAH"
     gene            1353..4076
                     /locus_tag="VF061_09345"
     CDS             1353..4076
                     /locus_tag="VF061_09345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669751.1"
                     /translation="MSGAENARLAEDARRVRNWKRWGPYLAERQWGTVREDYSEYGDC
                     WSYLPHDHARSRAYRWGEDGLLGITDRQGRLCFALALWNGRDPILKERLFGLAGPEGN
                     HGVDVKELYYYLDSTPTHSYLKGLYKYPQAEFPYERLARVNRERGKGEPEYELLDTGV
                     FDDGRYFDVIAEYAKADADDILIRITVANRGPEAATLHLLPTVWFRNTWSWGREGEGY
                     WRKPSLRQAGQGRIEAEHESLGRYVMEVEPLDGRDAPPLLFTENETNAQRLFGAPNGQ
                     PYVKDAFHRHLIAGETGAVNPAGGGTKAAAHYVLRVPPGAERIVRLRLRANGSDSSPA
                     FGPGFERLFERRLREADEFYAERIPATATEDERRVMRQGYAGLLWTKQFFHYVLAHWI
                     EGDPAQPAPPATRKAGRNSDWPHLYNRDVVSMPDKWEYPWYAAWDLAFHMIPFARIDP
                     EFAKEQLLLFLREWYMHPNGQIPAYEFALGDVNPPVHAWAVWRVYKMTGERGRRDRLF
                     LERAFQKLLLNFTWWVNRKDPEGRNLFAGGFLGMDNVGVFDRSQPLPTGGHLEQADGT
                     AWMAFYCNTMLAMALELASEDPAYEDLASKFFEHFIAIADAINHLGGSGLWSEDDGFY
                     YDQLHVDGQHIPLRVRSMVGVLPLIAVEVLDEEQFQDLEGFKRRMSWFLTNRPDITSD
                     IACMRPREREGRSRRLLAIPTRERLERMLRYLLDETEFLAPHGLRSVSRVHREHPYQF
                     DVMGNPYRVDYVPAEGNTGLFGGNSNWRGPIWFPVNFLVLEALERYHHFYGDELKVEC
                     PAGSGRMLTLQEVALELESRLAGLFLSDANGRRPCHGGESRYAADPHWKDLVLFHEYF
                     DGDNGRGVGASHQTGWTALAVRCLEDIARRRESPRTEARPRARPPLAGSRR"
     gene            4073..6052
                     /locus_tag="VF061_09350"
     CDS             4073..6052
                     /locus_tag="VF061_09350"
                     /inference="COORDINATES: protein motif:HMM:NF017964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amylo-alpha-1,6-glucosidase"
                     /protein_id="HEX6669752.1"
                     /translation="MRRPAVALDERTEWLEADGLGGFASGTTSGIRTRRYHALLLAAA
                     TPPTGRTVLVNGLDAWLERTGQPAEYLSRQRYAPGVVAPERGAELEAFAADPWPTWTW
                     RLGDGSTVEQELFVPRGLSATAVRWRRTGGSEAALVVRPFLSGRDTHALHHANPAFRF
                     DPTRAGAALVWRPYPGVPAVSALADGTYRHDPVWYRGFLYAEERERGLDFEEDLASPG
                     ELRWEPGWSEAVLLLSVDGALPPGEEAAPVYRRLRRSERGRRSRFGSRLERAADAYLV
                     QRGAGRTIVAGYPWFTDWGRDTFISLRGLCLATGRLEEARSILVEWAGHVSEGLLPNR
                     FVDQGGEPEYNTADASLWYVVAVHDYLAAVERRGRGVPARDRQVLGEAVRAILAGHVR
                     GTRYGIRVAGDGLLAAGEPGLQLTWMDAKVGDWVVTPRIGKPVEIQALWLNAVRAAGR
                     FTGEYAGLLEQGTRSFLQRFWNEDTGCLFDVVDEGHVVGRTDASIRPNQVLAIGGLPY
                     PLLTGDAARRVVDVVERRLWTPLGLRTLDSAAPGYRSRYEGDVPSRDGAYHQGTVWPW
                     LLGPFVEAWVRVRGGGQGVRREARRRFLEPLLAHLDEAGLGHVSEIADADPPHRPRGC
                     PFQAWSVAEALRLDLEVLRASRPAGSRPLAAGASA"
     gene            6049..7350
                     /locus_tag="VF061_09355"
     CDS             6049..7350
                     /locus_tag="VF061_09355"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX6669753.1"
                     /translation="MSPAEPIRVVILGGGFAGVHAAVELERSIPTGAPVEITIVNRDN
                     FLLFTPMLHEVAASDLDVTHIVNPIRRMVRRSVLFVGEVRGIDLEGRRVLVRHAGGGH
                     EHELPWDHLVLALGSVTNYFDLPGLEERALTMKSLGDAIGLRNRLIEVLEEADFECAA
                     ARRNDLLTILVAGGGFAGVETIAAANDFLREAIRAYPRLSPDMLRLVLVHSGRTILPE
                     LHPKLGAYAARVLGRRGVELRLGTRVTEVADAGVTLSDGSMVPAHTVVWTAGTAPNPM
                     LADLPCAREGGRVVADECLRVPEWPGVWALGDCARIPDGQGGFHPPTAQHALRQGRAL
                     GRNIAAAIRGEEPAPFRFSTLGQLAAIGRRTGVASIMGASFSGFLAWWLWRTIYLGKL
                     PGLDRKVRVALDWTLDLLLEKDLVQLRVERTVVERAVETVG"
BASE COUNT         1015 a         2557 c         2676 g         1118 t
ORIGIN      
        1 ctcgacacca ccgacggcaa cctcagcgtg cacgcgcgca agctcgagga ggcggactac
       61 gtcgtgtgca ccaagtcgtt cgagggacgg gtgccgcgga ccgagtaccg gctcagcccg
      121 cagggccgcc gggcgctgga gcgctacctg gagcacatgg aggcgctgat ccgggccacc
      181 cgcgagcggt aggcactctt tttttgaggt catactttat ggagcaaagc actctgcatg
      241 tcgggatcat catggacggc aacgggcggt gggcgtcccg cgagggacgc ccgcgcgccg
      301 aggggcatcg cgccggggcg cgcgcggtgc gccaggtggt ggaagcggcg cccgggtgcg
      361 gggtcggcgt cctcacgctc tacgccttct cggccgacaa ctggcggcgg ccgtcggccg
      421 aggtccgcgc cctcatgcga ctcttccgcg aataccttcg ggcggagacg acccgttgcg
      481 tcgagagcgg ggtgcggctc gaggtgatcg gtcggcggga tcggctcgac ccccacctcc
      541 atcgccgcat cctggcggcg gaacaggcca cggccggcgg gacccgcctg cacctccggc
      601 tggcggtgga ctactcgtcg cgcgacgcga ttctccgggc agcccaatgc ctccggccgg
      661 gcgccgggcc gaccagagac gccttcggcc gactcctcgc catcgtggat cacggcactc
      721 cggtgccgcc gctggacctg ctcattcgca ccggcggcga gcgccggctc agcgacttca
      781 tgctgtggga ggcggcgtac gccgagctct gcttcatcga ccggatgtgg cccgacttcg
      841 gtgcggccga gctgaccgcc gcggtccggg acttcggggc gcgcgagcgg cggttcggag
      901 gcctgggtcc ggtggcggcg gacgcctcct gagggtggaa cctttccctc gccggcggcg
      961 ttctggctct cgaccatcat gccgtccggg ccctgggagg ggagtcgatg aatcaccgca
     1021 tttcctgctc ggagacgttg ctccggctgg atgactttgt ggaccgggag ctatcgcccg
     1081 aggatctgga gctggtggag gagcacctgc tcgagtgcgt gcaatgcgcc gagaagttcc
     1141 gcttcgagac ctcgctggtc ggggctctcc gcgagcgcct cgcccgcatc gcggttccgg
     1201 agaccctcct tcgccgtatc cgggagcggc tggccgaggc gccgccttcc gagggcggtc
     1261 cggccgcgca ctagccgctc cccgccatcc cgtggaacct ccccgcgccg ccgcgcatta
     1321 ctccctccga tcagtcgaca atcgagggca tcgtgagcgg agcagagaac gcccggctgg
     1381 cggaggatgc gcgccgggtc cggaactgga agcggtgggg accctatctc gccgagcggc
     1441 aatggggcac ggttcgcgag gactactccg agtacggcga ctgctggagc tacctgccgc
     1501 acgaccacgc gaggagccgc gcctaccgct ggggtgagga cggactgctc ggcatcaccg
     1561 accgccaggg tcggctctgc ttcgcgctcg cgctctggaa cgggcgcgat cccatcctga
     1621 aggagcggct cttcggcctc gccggtccgg aagggaacca cggcgtggac gtcaaggagc
     1681 tgtactacta cctcgattcc accccgaccc actcctacct caaggggctc tacaagtatc
     1741 cccaggccga gtttccctac gagcggctgg cccgggtgaa ccgcgagcgc ggcaagggcg
     1801 agcccgagta cgagctgctg gataccggcg tcttcgacga cggacgctac ttcgacgtca
     1861 tcgccgagta cgccaaagcc gacgccgacg acatcctcat ccggatcacg gtggccaacc
     1921 gggggccgga agccgcgacg ctgcacctgc tgccgacggt ctggttccgc aatacctgga
     1981 gctggggccg cgaaggcgag gggtactggc ggaagccgtc cctccgccag gcggggcaag
     2041 gccggatcga ggccgagcac gagtcgctgg gccgctacgt catggaggtc gagccgctcg
     2101 acgggcggga tgcgcccccg ctcctcttca ccgagaacga gaccaacgcc cagcggctgt
     2161 tcggtgcgcc caatggccag ccgtacgtga aggatgcctt tcaccggcac ctgatcgctg
     2221 gagagacagg ggcggtcaat ccggcggggg gcggcaccaa ggccgccgcg cattacgtgc
     2281 tccgggttcc acccggggcc gagcggatcg tgcggctccg cctgcgagcg aacgggagcg
     2341 attcgtcccc ggcattcggt cccgggttcg agcggctctt cgagcggcgg ctccgggagg
     2401 ccgacgagtt ctacgccgag cggattccgg cgaccgcgac ggaggacgag cgtcgggtca
     2461 tgcgccaggg atacgccggt ctgctctgga ccaagcagtt cttccactac gtcctggcgc
     2521 actggatcga gggagatccg gcccagccgg cgcctccggc gacgagaaag gccggccgca
     2581 acagcgactg gcctcacctc tacaaccgcg acgtggtctc gatgccggac aagtgggagt
     2641 atccctggta cgcggcctgg gacctcgcct tccacatgat ccccttcgcc cggatcgacc
     2701 ccgagttcgc caaggagcag ctgctgctct ttctccggga gtggtacatg cacccgaacg
     2761 ggcagatccc ggcctacgaa ttcgccctgg gcgacgtgaa tccgccggtg cacgcctggg
     2821 cggtgtggcg ggtgtacaag atgaccggcg agcggggccg gcgcgaccgc ctcttcctcg
     2881 agcgcgcgtt ccagaagctg ctgctcaact tcacctggtg ggtgaaccgc aaggatcccg
     2941 agggccggaa cctcttcgcc ggcggcttcc tgggcatgga caacgtgggc gtgttcgacc
     3001 gctcgcagcc cctcccgacc ggcggacacc tcgagcaggc cgacggcacc gcgtggatgg
     3061 ccttctactg caacaccatg ctggcgatgg cgctggagct ggcctcggag gacccggcct
     3121 acgaggacct ggcgtcgaag ttcttcgagc acttcatcgc catcgcggac gcgatcaacc
     3181 atctcggcgg ctcgggactc tggtccgagg acgacgggtt ctactacgac cagctccacg
     3241 tcgacggcca gcacatcccg ctccgggtgc gctcgatggt cggcgtcctt cccctcatcg
     3301 ccgtcgaggt gctcgacgag gagcagtttc aggacctgga ggggttcaag cgccggatga
     3361 gctggttcct caccaaccgt cccgacatca ccagcgacat cgcctgcatg cggccgcgag
     3421 agcgtgaggg gaggtcccgc cggctcctgg cgattcccac gcgcgagcgg ctggagcgca
     3481 tgctgcgcta cctcctcgac gagaccgagt tcctcgcgcc ccacggcctc cgctccgtga
     3541 gccgggtcca tcgggagcat ccctaccagt tcgacgtcat gggcaacccc taccgcgtgg
     3601 attacgtccc cgccgagggg aacaccggcc tcttcggggg taactccaac tggcggggac
     3661 cgatctggtt cccggtcaac ttcctggtgc tggaggcact ggagcggtac caccacttct
     3721 acggcgacga gctgaaggtg gaatgcccgg ccggttcggg aaggatgctg acgctccagg
     3781 aggtggcgct cgagctggaa tcccgtctgg ccgggctctt cctgtccgac gcgaacgggc
     3841 gtcgcccctg ccacggcggg gagtcgcgct acgccgccga cccgcactgg aaggacctcg
     3901 tgctcttcca cgagtacttc gacggcgaca acggccgcgg cgtcggtgcg agtcaccaga
     3961 cgggatggac ggcgctggcc gtgcgctgcc tcgaggacat cgcgcgccgc cgggagagtc
     4021 cccggaccga ggcccgcccg cgggctcggc cgccgctggc tgggagccgg cggtgaggcg
     4081 ccccgccgtc gcgctcgacg agcgcaccga gtggctggag gcggacgggc tcggcggttt
     4141 cgcctccggc acgacctcgg gcatccgcac gcggcgctac cacgcgctgc tgctcgccgc
     4201 cgccacgcca cccaccgggc ggaccgtgct ggtgaacggt ctggacgcgt ggctcgagcg
     4261 gaccggtcaa ccggccgagt atctgagccg gcagcgctac gcgccgggcg tggtcgcccc
     4321 ggagcgtggg gctgagctgg aggcattcgc cgccgatccc tggcccacct ggacctggcg
     4381 cctgggcgac ggctccaccg tggagcagga gctcttcgtc ccgcgagggc tctccgcgac
     4441 cgcggttcgg tggcgccgaa ccggcgggag cgaggccgcc ctggtcgtcc gtccctttct
     4501 gtccggccgg gacacgcacg cgctgcatca cgccaatccg gcctttcggt tcgatccgac
     4561 ccgcgcgggc gcggcgctcg tgtggcggcc ctatcccggt gttcccgccg tcagcgcgct
     4621 cgccgatggg acctaccggc acgacccggt atggtaccgc gggttcctgt acgccgagga
     4681 gcgagagcgc gggctcgact tcgaggagga tctcgcctcg cctggtgagc tccgctggga
     4741 gcccggttgg tcggaggcgg tgcttctgct gtcggtggat ggggcgctgc ccccgggcga
     4801 ggaggccgct ccggtctacc gccggctgcg gcgctcggag cgcgggcgga ggtcccgctt
     4861 cggctcccgg ctcgagcgtg ccgccgatgc ctacctcgtc cagcgcggag cgggccggac
     4921 gatcgtcgcc ggctatccat ggttcaccga ctggggtcgc gacacgttca tctcgctgcg
     4981 cggactctgc ctcgcgaccg ggcggctgga ggaggcgcgc tcgatcctgg tggagtgggc
     5041 cggccacgtc tccgagggtc tcctgcccaa tcggttcgtg gaccagggcg gcgagcccga
     5101 gtacaacacg gccgatgcct cgctctggta cgtggtggcg gtgcacgatt acctggccgc
     5161 ggtcgagcgg cgtggccgcg gcgtcccggc ccgcgatcga caggtgttgg gcgaggcggt
     5221 ccgggcgatc ctcgccgggc acgtacgggg cacccgctac gggatccgag tggcgggcga
     5281 cggactgctc gccgccggcg agcccgggct gcagctgacc tggatggacg ccaaggtggg
     5341 ggactgggtg gtgacgcccc gcattggcaa gccggtcgag atccaggcgc tgtggctcaa
     5401 cgcggtccgt gccgccgggc ggttcaccgg cgagtatgcc ggcctgctgg agcagggcac
     5461 ccggtcgttc ctccagcgat tctggaacga ggacacgggc tgcctgttcg acgtggtgga
     5521 cgagggtcac gtggtggggc ggaccgacgc ctccattcgt cccaaccagg tgctcgcgat
     5581 cgggggcctc ccgtatccgc tgctgaccgg ggacgcggct cgcagggtgg tggacgtggt
     5641 cgagcgccgt ctgtggacgc cgctcggcct gagaacgctc gattccgccg cgccgggtta
     5701 ccggtcccga tacgaggggg acgtcccgag ccgcgacggc gcgtaccacc agggcaccgt
     5761 gtggccctgg ctgctgggac ccttcgtcga ggcatgggtc cgggtgcgcg gtggcggcca
     5821 gggtgtgcgc cgggaggctc ggcggcgctt cctcgagccg ctcctggcgc acctcgatga
     5881 ggccgggctg ggacacgtct ccgagatcgc cgacgccgac cctccgcacc ggccccgggg
     5941 ctgtcccttc caggcgtggt cggtggccga ggccctccgc ctcgatctcg aggtgctgcg
     6001 agcgtcgcgc cccgccggat cgcggccttt ggccgccgga gcgagcgcgt gagccccgcc
     6061 gagccgatcc gggtcgtgat cctcggcgga ggctttgcgg gggtacacgc agcggtcgag
     6121 ctggagcgct cgatcccgac gggagccccg gtcgagatca ccatcgtcaa ccgcgacaac
     6181 ttcctgctgt tcacgccgat gctccacgag gtcgcggcca gtgacctcga cgtcacccac
     6241 atcgtgaatc cgatccgccg catggtgcgg cgctcggtgc tgttcgtggg tgaggtccgg
     6301 ggcatcgacc tggagggacg ccgggtcctg gtgcggcacg ccggtggggg gcacgagcac
     6361 gagctgccct gggaccacct ggtcctcgcc ctcggcagcg tcaccaacta cttcgacttg
     6421 ccggggctgg aggagcgcgc gctcaccatg aagtcgctgg gggacgcgat cggcctgcgg
     6481 aaccggttga tcgaagtgct ggaggaggcc gacttcgaat gcgccgccgc ccggcgcaac
     6541 gatctcctca cgatcctcgt cgccggcggc ggattcgcgg gggtggagac gatcgccgcg
     6601 gcgaacgact tcctgcgcga ggcgatacgg gcctaccccc ggctctcgcc cgacatgctg
     6661 cggctggtcc tggtgcactc gggtcgcacc atcctccccg agctgcatcc gaaactgggc
     6721 gcctatgcgg cccgggtgct gggccggcgc ggggtcgagc tgaggctggg gacgcgggtg
     6781 accgaggtag ccgacgcggg cgtcacgctg agcgacggca gcatggtacc ggcccacacc
     6841 gtggtctgga ccgcgggcac ggcgcccaat ccgatgctgg cggacctccc ctgcgcccgg
     6901 gagggcggca gggtcgtggc ggacgagtgc ctccgggtgc ccgaatggcc cggcgtctgg
     6961 gccctggggg actgcgcgcg gatcccggac ggccagggcg ggttccatcc gcccaccgct
     7021 cagcatgcgc tccggcaggg ccgcgcgctg ggacggaaca tcgccgccgc catccggggc
     7081 gaggagccgg cgccgttccg gttctccacg ctcggccagc tggcggcgat cggacgccgg
     7141 accggcgtcg ccagcatcat gggcgcgagc ttctcgggat tcctcgcgtg gtggctctgg
     7201 cgcacgatct acctcggcaa gctccccggc ctcgaccgca aggtgagggt ggctctcgat
     7261 tggacgctcg acctgctgct ggagaaggac ctggtgcagc tccgggtcga gcgcaccgtg
     7321 gtggagcgcg cggtggagac ggtgggatga gacccgcgcc ggtgct
//
LOCUS       DASUYN010000479         2360 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_591510, whole genome shotgun sequence.
ACCESSION   DASUYN010000479 DASUYN010000000
VERSION     DASUYN010000479.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2360)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2360)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2360
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_591510"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1359
                     /locus_tag="VF061_09360"
     CDS             <1..1359
                     /locus_tag="VF061_09360"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEX6669754.1"
                     /translation="GEDVVLARRRTRQMAEHLGLDPQEQVRFATAVSEVARNAVQYGG
                     GGWAEFELATGGETLLVVRVADHGPGIPHLDAVLGGTYRSSTGLGVGLQGARRLVDRF
                     RVEAPPGQGTSVELAKLLPAGRRRSTLSVAELSQRLAAARPDDTASDLEMHSQELMRV
                     LTTLAERQTETDRLNTELNETNRGVLALYAELDDRAAELARVSQLKTAFLSGITHELR
                     TPLNSILNMTRILLSRMDGDLTAEQQLQVTLIQRAATTLTDLVADLLDLARIEAGKTE
                     VRLASFTVHDLFGALRGMVRPLLASDEVALVFEMPDHEVTLMTDEGKLSQILRNLISN
                     AIKFTERGEIRVEAATGPDDTLVFSVADTGVGIAPEDQGRIFEEFTQVDNPLQKHVRG
                     TGLGLPLSRKLAGLLGGRLELESALGAGSRFVLRMPRIHRNPRITPAEGVTALVGGET
                     RG"
     gene            1352..>2360
                     /locus_tag="VF061_09365"
     CDS             1352..>2360
                     /locus_tag="VF061_09365"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX6669755.1"
                     /translation="MAEPICIMVVDDTEANRYAVARHLRHAGYVVWEATDGHSALARV
                     AETPPDLVILDIRMPGIDGFEVVRRLRADPRTIHLPVLHVSASFTDPVSQAAGLDSGA
                     DGYLTHPVEPVVLLASVRALLRARSAEREAKAAEAAWRATFEAIGDGVCVVDEAARIE
                     RWNTAFEGIVGTSELKGRFLPEVMPVLAATPAAAPFLAAADGQALAGTEIAFGRKRLR
                     VSCEPMPAPDGRVHRAVCGVTDVTKQRAAEVRLQQAQRLEAAGQLAGGIAHEINNMMT
                     VVLGLAEFMVRSDELSDAHERDMAEITKAANRAAEMARQLLAFTRRQVLHPTLLDLNA
                     TL"
BASE COUNT          341 a          848 c          845 g          326 t
ORIGIN      
        1 ggggaagacg tcgtgctggc ccgccgccgc acccgtcaga tggccgagca cctcggcctc
       61 gatccgcagg agcaggtgcg cttcgccacc gccgtgtccg aggtggcccg gaacgccgtg
      121 cagtacggag ggggcggctg ggcggagttc gagctcgcga ccggaggaga gacgcttctc
      181 gtggtgcggg tcgccgacca cggtcccggc atcccgcacc tcgatgcggt gctcggcggg
      241 acctatcgct cctccacggg gctcggtgtg gggctgcagg gcgcgcgccg gctggtggac
      301 cggttccgcg tcgaggcgcc gcccggtcag gggacctcgg tcgagctcgc caagctgctc
      361 cccgccggtc gccgccgctc gaccctctcg gtcgccgagc tgagccagcg gctcgcggcg
      421 gcccgtcccg acgacacggc cagcgacttg gagatgcata gccaggagct gatgcgggtg
      481 ctgacgacgc tggccgagcg gcagacggag accgatcgcc tcaacaccga gctgaacgag
      541 accaaccggg gcgtgctcgc gctctacgcg gagctggacg accgggccgc cgagctcgcc
      601 cgggtgtcgc agctcaagac ggcgttcctg tcgggcatca cccacgagct ccgcaccccg
      661 ctcaactcca tcctcaacat gacccgcatc ctcctctccc ggatggacgg cgacctcacc
      721 gcggagcagc agctccaggt caccctcatt cagcgggcgg cgacgaccct gaccgatctg
      781 gtggcggacc tcctcgacct ggcgcggatc gaggcgggga agaccgaggt gcggctggcg
      841 tccttcaccg tccacgacct cttcggcgcc ctgcgcggga tggtccggcc gctgctggcc
      901 tcggacgagg tggccctggt cttcgagatg ccggatcacg aggtcaccct gatgaccgat
      961 gagggcaagc tctcccagat cctccggaac ctgatctcca acgcgatcaa gttcaccgaa
     1021 cggggagaga tccgggtgga ggccgccacc ggaccggacg acaccctcgt cttcagcgtg
     1081 gccgacaccg gcgtcggcat cgcgccggaa gaccagggtc ggatcttcga ggagttcacc
     1141 caggtggaca acccgcttca gaagcacgtg cggggcaccg gcctgggtct cccgctctcc
     1201 cgcaagctcg ccggcctgct cggcggccgc ctcgagctgg agagcgcgct cggggcggga
     1261 tcgcggttcg tgctgcgcat gccgcggatt caccgcaatc cccggatcac cccggccgag
     1321 ggagtgacgg cgctggtcgg aggggagact cgtggctgag ccgatctgca tcatggtggt
     1381 ggacgacacc gaggccaacc gctacgccgt ggcccgccac ctccggcacg ccggctacgt
     1441 cgtgtgggaa gcgaccgacg gccactcggc cctggcccgg gtggcggaga cccctcccga
     1501 tctggtcatc ctggacatcc ggatgccggg catcgacggg ttcgaggtgg tgcgccgcct
     1561 gcgggccgat ccccgcacga tccaccttcc ggtccttcac gtctcggcca gcttcaccga
     1621 cccggtgagc caggcggccg gcctcgacag tggcgccgat ggctatctca cccacccggt
     1681 agagccggtc gtgctcctcg ccagcgtgcg ggcgctgctc cgcgcccgct ccgcggagcg
     1741 cgaggccaag gccgccgagg cggcgtggcg ggccaccttc gaggcgatcg gcgacggggt
     1801 gtgcgtggtg gacgaggccg cacgcatcga gcgctggaac acggccttcg agggcatcgt
     1861 cgggacctcc gagctgaagg ggcgtttcct gccggaggtg atgccggtgc tggcggccac
     1921 cccggcggcg gcgccgtttc tggcggcggc cgacggccag gccctcgccg gaaccgagat
     1981 cgccttcgga aggaagcgac tgcgggtctc ctgcgagccg atgccggcgc ccgacggcag
     2041 ggtccaccgc gcggtctgcg gggtgaccga cgtgaccaag cagcgcgccg ccgaggtgcg
     2101 gctccagcag gcgcagcggc tggaggcggc cgggcagctc gccgggggca tcgcgcacga
     2161 gatcaacaat atgatgaccg tggtgctggg cctcgccgag ttcatggtcc gctccgacga
     2221 gctgtcggac gcgcacgagc gcgacatggc cgagatcacc aaggcggcga accgggccgc
     2281 ggagatggcg cgccagctcc tcgccttcac ccgccggcag gtgctccatc ccacgctgct
     2341 cgatctgaac gccaccctgg
//
LOCUS       DASUYN010000480         3046 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_150762, whole genome shotgun sequence.
ACCESSION   DASUYN010000480 DASUYN010000000
VERSION     DASUYN010000480.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3046
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150762"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            133..1398
                     /locus_tag="VF061_09370"
     CDS             133..1398
                     /locus_tag="VF061_09370"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: protein motif:HMM:NF001221.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004350 - glutamate-5-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HEX6669756.1"
                     /translation="MATTTPTVHDVCVAAKDASRVLARADRAAKDACLRDLAERIEAR
                     SADILEANAADVEAGREEGLTEALIDRLTLTDARIADMAIGVREIADLEDPVGEIAES
                     WTLENGLRVQKQRAPLGVIGIVYEARPNVTIDAAALCLKSGNAVVLRGSSAAETSNGI
                     LAGLVTESLRDAGLPEAAVSLLSGGGREQLGELATQEGLVDLIIPRGGEGLKMALKAV
                     AKVPVMYAAAGNCHVYVHEDADLEMAARIAYNAKVQRPGVCNAAETLLVHESVADELL
                     PRLLADLSGAGVELVGDERARASAGEVEVGEATTEDWDTEYHGLKMAVGAVPSLEQAV
                     DHINRHGTGHSDAIVTSSDEAATEFTDSVDSAAVYVNASTRFTDGYEFGMGAEIGNST
                     QKLHARGPIGLRELTSTKYVVHGSGQVRE"
     gene            1427..2005
                     /gene="nadD"
                     /locus_tag="VF061_09375"
     CDS             1427..2005
                     /gene="nadD"
                     /locus_tag="VF061_09375"
                     /inference="COORDINATES: protein motif:HMM:TIGR00482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000309 - nicotinamide-nucleotide
                     adenylyltransferase activity [Evidence IEA];
                     GO_function: GO:0004515 - nicotinate-nucleotide
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate (nicotinamide) nucleotide
                     adenylyltransferase"
                     /protein_id="HEX6669757.1"
                     /translation="MGGAFNPPHVGHLLLAQEARAELGLNRVLLVTTGEAPHKAIADD
                     PGAEVRFEMTRLAAEGEEATEAWDFEVRSDGPSYTYLTLAALAEEEPQRELFLLLGAD
                     AAAGLASWKLPERITELARIGVVPRPGVGMDAVRSALDRCGAADRGEIIRMPLCGASS
                     TLIRERAAAGRPLRHLVPDPVIGLISERGLYR"
     gene            2002..2394
                     /gene="rsfS"
                     /locus_tag="VF061_09380"
     CDS             2002..2394
                     /gene="rsfS"
                     /locus_tag="VF061_09380"
                     /inference="COORDINATES: protein motif:HMM:TIGR00090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0017148 - negative regulation of
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HEX6669758.1"
                     /translation="MSAAAERDRRREARVDSEALARRIAELADAKGASELVALDVRPL
                     VGYTDFLVICTARNERQAKAIHDEVHHKLKDEGRLPARVEGESEAEWVLADYLDCVLH
                     VFTPEARERYRLEVLWGEAETLDLGAAA"
     gene            2426..2962
                     /locus_tag="VF061_09385"
     CDS             2426..2962
                     /locus_tag="VF061_09385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669759.1"
                     /translation="MAGDRLESIQENARRRADRLRLSAQEIRQLRQRAAELSKLRDEL
                     GSLISELAGLAGDLLLGGQEAGREARGGGTEPGAGPADPAPVSPPPDAYVGPVAVSVG
                     PLRDFAQLTSFEDAASRIGAAEDVQIRGFTDGRATFSMNFAQPVDLVRELEAYAPFGF
                     SVRAASGDAVVLDVKDAA"
BASE COUNT          451 a          892 c         1306 g          397 t
ORIGIN      
        1 gccaagggcc acgacaagga caaggacaag gacgacgact agccgccgcg ccgggaacgc
       61 cctgatcttg cgggcggcgg cgcggttcgc ggcccccgcg gcagcgtcgg cggtgcggct
      121 agtcttttct gcatggccac gacgaccccg accgtgcatg acgtgtgcgt ggcggcgaag
      181 gacgcctcgc gcgtcctggc tcgcgccgac cgcgccgcca aagacgcgtg cctgcgcgac
      241 ctggcggagc ggatcgaggc ccggagcgcc gacatcctgg aggcgaacgc agcggacgtg
      301 gaggcggggc gcgaggaggg gctgaccgag gcgctgatcg accggctgac gctgacggat
      361 gcgcggatcg ctgacatggc gatcggggta cgcgagatcg cggacctgga ggacccggtc
      421 ggtgagatcg ctgagagctg gacgctcgag aacgggctgc gggtgcagaa gcagagggcg
      481 ccgctgggcg tgatcgggat cgtctacgag gcgaggccga acgtgacgat cgacgccgcc
      541 gcgctctgcc tgaagagcgg gaacgcggtg gtgctgcggg ggtccagcgc ggcggagacc
      601 tcgaacggga tcctggcggg gctggtgacg gagtcgctgc gcgatgccgg gttgccggag
      661 gcggcggtgt ccctgctgtc cggtggcggg cgcgagcagc tgggggagct ggccacgcag
      721 gagggtctgg tggacctgat catcccgcgc gggggcgagg ggctgaagat ggccctgaag
      781 gcggtggcga aggtgccggt gatgtacgcc gccgcgggga actgccacgt gtacgtgcac
      841 gaggacgcgg atctggagat ggcggcgcgg atcgcataca acgccaaggt gcagaggccg
      901 ggggtgtgca acgcggccga gacgctgctg gtgcacgagt cggtggcgga cgagctgctg
      961 ccgaggctgc tggccgacct gagcggcgcg ggcgtcgagc tcgtggggga cgagcgggcg
     1021 cgcgcgagcg cgggcgaggt cgaggtcggg gaggcgacca ccgaggactg ggacacggag
     1081 taccacgggc tgaagatggc cgtgggggcc gtaccgtcgc tcgagcaggc ggtcgatcac
     1141 atcaaccggc acgggaccgg gcactcggac gcgatcgtga cctcgtcgga tgaggccgcg
     1201 acggagttca ccgacagcgt ggactcggcg gcggtctatg tgaacgcgtc cacgcggttc
     1261 acggacggat acgagttcgg gatgggggct gagatcggga actccaccca gaagctgcac
     1321 gcgcgcgggc cgatcgggct gcgcgagctg acgtcgacca agtacgtggt ccacggcagc
     1381 gggcaggtca gggagtaggg ctgtcggggc gggagctcta ggtgtcctgg gcggcgcgtt
     1441 caacccgccg cacgtcggac atctgctgct ggcgcaggag gcccgggccg agttggggct
     1501 aaaccgggtg ctgctggtga cgacggggga ggcgccgcac aaggcgatcg cggacgaccc
     1561 cggggcggag gtgcggttcg agatgacccg cctggcggcc gagggggagg aggcgaccga
     1621 ggcgtgggac ttcgaggtgc gcagcgacgg gccgtcctac acctacctga cgctcgcggc
     1681 gctggccgag gaggagccac agcgggagct gttcctgctg ctgggggcgg acgccgcggc
     1741 ggggctggcg agctggaagc tgccggagcg gatcacggag ctggcgcgga tcggggtggt
     1801 gcccaggccg ggggtgggca tggacgcggt gcggtccgcg ctggaccgct gcggcgccgc
     1861 cgatcggggg gagataatcc ggatgccact ttgcggggcc tcatcgacac tgatcaggga
     1921 gcgggcggcg gccgggaggc cgctgcgcca cctggttccg gatccggtga tcgggctgat
     1981 ctccgagcgg gggttgtacc ggtgagcgcg gcggcggaga gggaccggcg gcgcgaggcg
     2041 cgggtggact ccgaggcgct ggcgcggcgg atcgcggagc tggcggacgc gaagggggcg
     2101 agcgagctgg tggcgctgga cgtgcggccg ctggtgggat acacggactt cctggtgatc
     2161 tgcacggcgc ggaacgagcg gcaggcgaag gcgatccacg acgaggtgca ccacaagctg
     2221 aaggacgagg ggcggctgcc ggcgcgcgtg gagggggagt cggaggcgga gtgggtgctg
     2281 gccgattacc tcgattgcgt gctgcacgtg ttcacgcccg aggcgcggga gcggtaccgg
     2341 ctcgaggtgc tctggggaga ggccgagacg ctggacctgg gcgcggccgc gtaggaccgt
     2401 ccgggggcga acctacgctc cgttcgtggc tggcgaccgg ctggagtcga tccaggagaa
     2461 cgcgaggagg cgggcggacc ggctgcggct gagcgcgcag gagatcaggc agcttcggca
     2521 gcgcgcagcc gagctgtcga agctgcggga cgagctcgga tcgctgatct cggagctggc
     2581 cggccttgcc ggggacctgc tgctgggtgg ccaggaggct gggcgtgaag cgaggggggg
     2641 agggacggag cccggagccg ggcccgccga ccccgcgcca gtatcgccgc cgcctgacgc
     2701 ctacgtcggg ccggttgcgg tctcggtggg gccgctgcgg gacttcgcgc agctgacgag
     2761 cttcgaggac gccgcctccc ggatcggcgc cgcggaggac gtgcagatcc ggggcttcac
     2821 ggacggccgc gccaccttct cgatgaactt cgcccagccg gtggacctgg tccgggagct
     2881 ggaggcgtat gcgccgttcg ggttcagcgt gcgggcggcg agcggagacg cggtcgtgct
     2941 ggacgtgaag gacgccgctt aggcgagctc ccagagccac ggagagcggt ttcactgact
     3001 cggcgcggtt ctggcacata cccgtttgcg ttccgcgctt gtcttg
//
LOCUS       DASUYN010000481         2399 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1255554, whole genome shotgun sequence.
ACCESSION   DASUYN010000481 DASUYN010000000
VERSION     DASUYN010000481.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2399)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2399)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2399
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1255554"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1105
                     /locus_tag="VF061_09390"
     CDS             <1..1105
                     /locus_tag="VF061_09390"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:NF013015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006261 - DNA-templated DNA replication
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HEX6669760.1"
                     /translation="GGRRDQRGVVQSASYGARKFGIHAGMPIAQAVRLCPAATFFQGS
                     FIHYRDASRAVRAVLQRFSPTVVMASLDEAYLDFAGTDRLYPVSLLPVAERIRDTVRA
                     ETGLDCSIGIGPNRMIAKLASDSAKPRGLMEVRAGWEEGFLAGLPLSAMPGVGPKTAA
                     RWADLGLTDVYQVQRMDEEALSRLLGGDARGLKRRAHGHAGSTLRGERLPKSVSRETT
                     LSRDLRDPEELEAILSLLTARVAGQLRDEQLVGRTVTLKLRHDDFYTVTRRRTLETAT
                     DLDAELYDAARALFREAFGDVRRRNRGVRLIGIAATNLGVAAEADLFEPPGRQRLREL
                     SAAVDKVRGKYGFGAVTPGSVLRARRKRGRREE"
     gene            complement(1126..1743)
                     /locus_tag="VF061_09395"
     CDS             complement(1126..1743)
                     /locus_tag="VF061_09395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669761.1"
                     /translation="MGRTLLLALLLALAATGGVYLFMGRSGLRFTNRLAAPVQVAIAD
                     RVDTVPAGGTAELAVPRGGTAVAEWALIRPLSADDRPMGEEVRGAVVLRGRGTIADSA
                     WVRQGDADYFAPLVTNASDSLLRITVNAGLQGALDCGCAVRPGATRVFIGYYRLYANS
                     TVRARTRSGAEATFRDLGPQVTRSDGTVGLRFEGKDLRGVTLIRR"
     gene            complement(1747..>2399)
                     /locus_tag="VF061_09400"
     CDS             complement(1747..>2399)
                     /locus_tag="VF061_09400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669762.1"
                     /translation="GIVETAAAIPPMPTAALVVENRLAEPIALSVDDTALTIPPGGSR
                     RLAVPGQVPLEASWALVQPTAGDQVLGERMEGAIVAERAEGEIYRVVDAETGGEARFA
                     PVVVNQAGRPLRVAVVGPNDSLDCDCRIASGDSLRLGYYRYTDGTGLRVTDGRGWSTL
                     VTGLGDRRDPASGAVVVRVRGGDLRAPPAATPRRGKPARPPAAERRNPLSSFLPVD"
BASE COUNT          314 a          902 c          867 g          316 t
ORIGIN      
        1 gggcggccgc cgcgatcagc ggggggtggt ccagtcggcc tcctacggcg cgcggaagtt
       61 cggcatccac gccggaatgc cgatcgccca ggcggtgcgg ctctgccccg cggccacgtt
      121 cttccaggga tccttcatcc actatcgcga cgcctcgcgc gcggtccgcg cggtgctcca
      181 gcgcttctcg cccacggtgg tcatggcctc cctggatgag gcctacctcg acttcgccgg
      241 caccgaccgg ctctacccgg tctcgctcct cccggtggcg gagcgcatcc gcgacacggt
      301 gcgcgccgag accgggctcg actgcagcat cggcatcgga cccaaccgga tgatcgccaa
      361 gctggcctcc gacagcgcga agccgcgcgg gctcatggaa gtgcgcgccg gctgggagga
      421 ggggtttctc gccggccttc ccctctcggc catgccgggg gtcggcccca agacggcggc
      481 gcgttgggcc gacctgggtc tcaccgacgt gtaccaggtg cagcggatgg acgaggaggc
      541 gctgtcccga ctcctgggcg gcgatgcccg cggcctcaag cgccgcgcgc acgggcatgc
      601 cggctccacc ctccggggcg agcggctccc gaagtcggtc agccgggaga ccaccctctc
      661 ccgcgacctg cgcgaccccg aggagctgga ggcgatcctc tcgctgctca ccgcgcgagt
      721 ggcgggacag ctgcgggacg agcagctagt gggcaggacg gtcaccttga agcttcggca
      781 cgacgacttc tacacggtca cccgccgccg cacgctggag acggcgaccg acctcgacgc
      841 ggagctctac gacgccgcgc gggcgctgtt ccgggaggcg ttcggggacg tgcggcggcg
      901 caaccggggg gtgcggctga tcgggatcgc cgccaccaat ctcggggtgg cggcggaggc
      961 ggacctcttc gagccgcccg ggcgacagcg gctccgggag ctctcggctg cggtggacaa
     1021 ggtgcggggg aagtacggct tcggggcggt gacgccggga tcggtgctgc gcgcgcggcg
     1081 gaagcggggg cggcgggagg agtgaatggg gtcgcgcgcc atgggtcagc ggcgaatcaa
     1141 ggtgaccccc cggaggtcct ttccctcgaa cctgagcccc accgtgccat cgctccgggt
     1201 gacctgcggc ccgagatcgc ggaaggtggc ctccgcaccc gaccgggtcc gggcacggac
     1261 ggtgctgttg gcgtacaggc ggtagtagcc gatgaacacc cgcgtcgcgc ctggccgtac
     1321 cgcgcaaccg cagtcgagcg ccccctggag gcccgcgttc accgtgatcc ggagcaggct
     1381 gtcgctggcg ttggtgacca acggcgcgaa gtagtcggcg tcgccctggc gcacccaggc
     1441 gctatcggcg atcgtcccgc ggccgcgaag gaccaccgct ccgcgaacct cctcacccat
     1501 cggccggtcg tccgccgaga ggggacggat cagcgcccat tccgccaccg cggtgccgcc
     1561 ccgcggcacc gccaactcgg ccgtgccgcc cgcgggcacc gtgtcgaccc ggtcggcgat
     1621 cgccacctgc acgggcgccg ccagccggtt ggtgaaccgc agcccgctcc ggcccatgaa
     1681 caggtatacc ccgccggtcg cggccagggc gagcagcagc gcgagcagga gcgtacgacc
     1741 caccgctcag tccaccggca ggaacgagct cagcgggttg cgccgctcgg cggcgggcgg
     1801 acgggcgggc ttgccgcgcc ggggtgtcgc ggccggaggg gcccgcaggt cgcccccgcg
     1861 cacgcgcacc accaccgcgc cgctcgccgg gtcgcggcga tcgcccaatc ccgtcaccag
     1921 cgtgctccag ccccggccgt cggtcacccg taagcccgtc ccgtcggtgt atcggtagta
     1981 gcccaggcgc agcgagtcgc cgctcgcaat cctgcagtcg cagtcgaggc tgtcgttcgg
     2041 tcccaccacg gccaccctga gcgggcggcc cgcctggttg accaccaccg gcgcgaatct
     2101 ggcctcgcca ccggtctcgg cgtccaccac ccggtagatc tccccctccg cccgctccgc
     2161 cacgatcgcg ccttccatcc gctcgccgag cacctggtcg cctgcggtgg gctgcaccag
     2221 ggcccagctg gcctccagcg gcacctgccc ggggacggcg agccggcggc tccccccggg
     2281 cgggatggtg agggcggtgt cgtccacgct gagcgcgatc ggctcggcga gccgattctc
     2341 gaccaccagt gcggccgtcg gcatgggagg tatggcggcg gcggtttcca cgatccctc
//
LOCUS       DASUYN010000482         4954 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1695605, whole genome shotgun sequence.
ACCESSION   DASUYN010000482 DASUYN010000000
VERSION     DASUYN010000482.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4954)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4954)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4954
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1695605"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..877
                     /locus_tag="VF061_09405"
     CDS             <1..877
                     /locus_tag="VF061_09405"
                     /inference="COORDINATES: protein motif:HMM:NF018004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1015 family protein"
                     /protein_id="HEX6669763.1"
                     /translation="IRKHEKTRQDKEDDRTRHVLTLNANAEPVFLTYRGQAGIDALVA
                     TMTSAAPLYDFTAPDGVRHTVWTVPDSGALAQAFAPVPHAYVADGHHRSASAWRAGKE
                     LKARNPSHRGDEEYNWFLAVLFPSDQLRILPYNRVVRDLHGQSPARVLERLRGLGALS
                     AASNPAPERSGVFCVHLEGRWHRLELDPAGIDRSDPIASLDVSLLQDRVLSPILGIGD
                     PRTDERIDFVGGIRGTAELERRVRSGEMAIAFSLHPTTLDQLMAVSDAGHVMPPKSTW
                     FEPKLRSGLFVHELS"
     gene            919..2136
                     /locus_tag="VF061_09410"
     CDS             919..2136
                     /locus_tag="VF061_09410"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX6669764.1"
                     /translation="MKVLIADKFEKVGIDGLKELGCSIVSRPDLTAEALPAAVKEVDP
                     NILIVRSTKVTAETLNAGAALTLVIRAGAGIDTIDVAAASGRGIFVSNCPGKNSIAVA
                     ELVMALMLACDRRIPDQVAELRQGKWNKAEFSKARGLYGRTLGIVGLGQIGREVAVRA
                     SAFGMRVLAWSRTLTHEEADRLGVAYAHNPVEVARLSDVVTINVAANAETQNLVNAEF
                     LAAMRPGAYLINTSRGSVLDEAALAQAIGEKKLRAGLDVFQGEPAGGTGEFRSAILQV
                     PGVYGTHHVGASTDQAQVAIAHEVIRIVQAFQATGEVPNVVNRLARSSASHVLSIRHR
                     NRPGVLAHVFGVLAGAEINVEEVENIIYHGAQATLARIHLDGAPGNGALERIKSGNAD
                     IISVELSEIDGRP"
     gene            2140..3246
                     /gene="serC"
                     /locus_tag="VF061_09415"
     CDS             2140..3246
                     /gene="serC"
                     /locus_tag="VF061_09415"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016290567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004648 -
                     O-phospho-L-serine:2-oxoglutarate aminotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoserine/phosphohydroxythreonine
                     transaminase"
                     /protein_id="HEX6669765.1"
                     /translation="MSKRIFNFSAGPAVLPEPVLRKAQEAVWDVAGSGIGIMEHSHRG
                     KVFDRIRDEAEQACRDLAGIPDNYQVLFLQGGASLQFSMVPMNLLPPDRTADYLLTGV
                     WAQKAVKEAKILGAKVHLAASSEGTNFDRIPPASEIRYSERPAYVHLTTNNTIYGTQW
                     RSEPSVPSGVPLVADTSSDMYSRPIDVGRYGLIYAGAQKNLGPSGVVLVIVRDDLVEA
                     GPKTLPTMLQYRTHAAEKSLYNTPPTFGIYVMGEVFKWIQSQGGLAAIAGHNESKARL
                     LYDYIDQSDFFRGTAQTDSRSWMNVCFRAPTEELETKFVAEATKRGFDGLKGHRSVGG
                     MRASIYNACPRPAVEALVAFMKEFEQANRAAARA"
     gene            3319..4692
                     /locus_tag="VF061_09420"
     CDS             3319..4692
                     /locus_tag="VF061_09420"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX6669766.1"
                     /translation="MLSLALAGLCTLACPTDPPRPDRSQAVTAFVDVTVIPMDRERRL
                     PGQTVVVRGDRIVALGPVARVEVPDGATRVDGKGKFLIPGLAEMHAHIPGGQASDSAV
                     ERTLFLYAAGGLTTIRGMLGHPRHLGLRARAASGELLSPTIYAAGPSLNGNSLPDPAA
                     ARRAATEQKEAGYDLLKIHPGVSREAFDTLVTVARAVGIPYAGHVPTEVGVARAIEAR
                     YASIEHLDGYVEAMVREGAPVGADESAFFGLNLGEHLDESKLPALVAATRKAGVWNVP
                     TQVLLENLVLAGSSAELARRPEMRYVAPETRAQWAEVKESMLQETGSTPESARRTIAM
                     RRKLIKALHAAGAGLLLGSDAPQIYNVPGFSTHRELESLVAAGLTPYQALETGTRNIA
                     KYFGTERETGTVEQGKRADLILLEADPLADIRNTTKRAGVMVRGRWLPQAEIERRLAA
                     VAKAAGN"
     gene            complement(4702..>4954)
                     /locus_tag="VF061_09425"
     CDS             complement(4702..>4954)
                     /locus_tag="VF061_09425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HEX6669767.1"
                     /translation="GTGNSELVLSRELADRRVFPAIDLVASATRREELLLDPPTLEAS
                     RALRQRIAGMTPINAMNDLLVDLRRHRTNAELVRSLNGG"
BASE COUNT          772 a         1734 c         1757 g          691 t
ORIGIN      
        1 catccgcaag cacgagaaga cccggcagga caaggaggac gaccgtaccc ggcacgtgct
       61 cacgctcaac gccaacgccg agccggtctt cctcacctat cgcggccagg ccggcatcga
      121 tgccctggtg gcgacgatga cctcggcggc gccgctctac gacttcaccg cgcccgacgg
      181 cgtgcgccac accgtctgga ccgtgcccga ctcgggcgcg ctggcgcagg cgttcgctcc
      241 ggtgccccac gcctacgtgg ccgacgggca ccaccgctcg gcgagcgcct ggcgggcggg
      301 caaggagctg aaggcgagga atccctcgca ccggggagac gaggagtaca actggtttct
      361 ggccgtgctc tttccgtccg atcagctccg gatcctgccc tacaaccgcg tggtgcggga
      421 tctccacggc cagtcgcccg cccgggtgct ggagcggctc cgcggactcg gcgccctctc
      481 ggccgcgtcg aatccggcgc cggagcgcag cggggtcttc tgcgtccatc tcgaggggcg
      541 ctggcatcgc ctggagctgg atccggccgg catcgaccgc tcggacccga tcgcctcact
      601 ggacgtgtcg ctgctgcagg atcgcgtgct gtcgcccatc ctcggcatcg gcgacccccg
      661 gacggacgag cggatcgatt tcgtgggcgg gatccggggc accgccgagc tggagcgccg
      721 ggtgcgctcg ggtgaaatgg cgatcgcctt ctcgctccac ccgacgacgc tcgaccagct
      781 catggcggtg tcggacgcgg gccacgtcat gccgcccaag agtacctggt tcgagcccaa
      841 gctcaggagc ggtttgttcg tccacgagct aagttaggct tcgctcagga tgacagcgtc
      901 agcggaaatg gagtccgaat gaaggtcctg attgccgaca agttcgagaa ggtcggcatc
      961 gacggtctga aggagctcgg ctgcagcatc gtctcgcggc ccgacctcac cgcggaagcg
     1021 ctccccgcgg cggtgaagga ggtcgatccg aacatcctca tcgtccggag caccaaggtg
     1081 accgcggaga cgctcaacgc gggcgccgcg ctcacgctgg tgatccgcgc cggcgccggc
     1141 atcgacacca tcgatgtcgc cgccgcctcc ggccggggca tcttcgtctc caactgcccg
     1201 ggcaagaact cgatcgccgt ggccgagctg gtgatggcgc tgatgctcgc ctgcgaccgc
     1261 cggatccccg atcaggtcgc ggagctgcgg caggggaagt ggaacaaggc ggagttctcc
     1321 aaagcccgcg ggctctacgg ccggaccctg ggaatcgtgg gcctggggca gatcgggcgc
     1381 gaggtggcgg tccgggcgag cgccttcggg atgcgggtgc tggcctggtc gcggactctc
     1441 acccacgagg aggccgaccg cctcggcgtc gcctatgccc ataacccggt cgaggtggcc
     1501 cggctctcgg acgtggtcac catcaacgtg gccgcgaacg cggagaccca gaacctggtc
     1561 aacgccgagt tcctggcggc gatgcggccg ggggcctacc tcatcaacac ctcgcgcggc
     1621 tcggtgctgg acgaggcggc gctggcgcag gcgatcgggg agaagaagct gcgcgccggg
     1681 ctggacgtct tccagggcga gcccgccggc ggcaccggcg agttccggag cgccatcctc
     1741 caggtgccgg gcgtgtacgg cacccaccac gtcggcgcct cgaccgacca ggcgcaggtg
     1801 gccatcgccc acgaggtgat ccggatcgtg caggcgttcc aggccaccgg cgaggtgccc
     1861 aacgtcgtca accggctcgc ccgcagctcg gcgagccacg tgctctccat ccgccaccgg
     1921 aaccgccccg gcgttctcgc ccacgtcttc ggcgtgctgg ccggcgccga gatcaacgtg
     1981 gaggaggtgg agaacatcat ctatcacggc gcgcaggcca cgctcgcgag gatccacctc
     2041 gacggcgcgc ccggcaacgg ggcgctggag cggatcaagt ccggcaacgc ggacatcatc
     2101 agcgtggagc tcagcgagat cgacgggagg ccttagacca tgagcaagcg catcttcaat
     2161 ttctccgccg gccccgcggt cctgcccgag cccgtgctcc ggaaggccca ggaggcggtc
     2221 tgggacgtcg ccggcagcgg catcggcatc atggagcaca gccaccgggg caaggtgttc
     2281 gaccggatcc gcgacgaggc cgagcaggcc tgccgcgacc tggccggcat ccccgacaac
     2341 taccaggtgc tgttcctgca gggcggggcg tcgctccagt tcagcatggt gccgatgaac
     2401 ctgctgcccc cggaccgtac cgccgactac ctgctcaccg gcgtctgggc ccagaaggcg
     2461 gtgaaggagg cgaagatcct gggggcgaag gtgcacctcg cggcgagcag cgagggcacc
     2521 aacttcgacc ggatcccgcc ggcctcggag atcaggtact ccgagcgacc ggcctacgtg
     2581 cacctcacca ccaacaacac catctacggc acccagtggc gctcggagcc gtcggtgccc
     2641 tcgggcgtgc ccctcgtcgc cgacacctcg agcgacatgt acagccgccc gatcgacgtg
     2701 ggccgctacg ggctgatcta cgccggggcg cagaagaacc tggggccgtc cggggtcgtc
     2761 ctggtgatcg tccgcgacga cctggtcgag gcgggaccca agaccctccc gaccatgctg
     2821 cagtaccgga cccacgcggc ggagaagtcg ctctacaaca ctccgccgac gttcgggatc
     2881 tacgtgatgg gtgaagtgtt caagtggatc cagtcccagg gcggtctcgc cgcgatcgcg
     2941 gggcacaacg agtccaaggc gcggctgctc tacgactaca tcgaccagag cgacttcttc
     3001 cgcggcaccg cgcagaccga cagccgctcg tggatgaacg tgtgcttccg cgctcccacc
     3061 gaggagctgg agaccaagtt cgtggccgag gcgacgaagc gcgggttcga cgggctcaag
     3121 ggtcaccgca gcgtcggcgg gatgcgggcc agcatctaca acgcgtgccc ccgtcccgcg
     3181 gtggaggcgc tggtcgcgtt catgaaggag ttcgagcagg ccaaccgggc cgccgcgcgg
     3241 gcctgagccg agcctgaaac ggagggtcgc ccgcgcgcgt acggctcggg cgacccttcc
     3301 tcgtctccgg agctctccat gctgtccctg gccctcgccg gtctctgcac gctcgcctgt
     3361 ccgaccgacc ctcctcgccc cgatcgatcc caagctgtca ccgccttcgt ggacgtcacc
     3421 gtgatcccca tggatcggga gcggcgcctt ccgggccaga ccgtcgtggt gcggggcgac
     3481 cgcatcgtcg cgctcgggcc ggtggcacgg gtcgaggtgc ccgacggcgc gaccagggtg
     3541 gacggcaagg gaaagttcct gatcccgggc ctggcggaga tgcacgccca cattccgggg
     3601 gggcaggcct cggactccgc ggtggagcgc acgctgttcc tgtacgcggc gggggggctc
     3661 accaccatcc gcgggatgct ggggcacccg cgccacctgg ggctgcgggc ccgcgcggcg
     3721 agcggcgagc tgctgagccc caccatctat gccgcggggc cgtcactcaa cgggaacagc
     3781 cttcccgatc ccgccgcggc ccggcgggcg gcgaccgaac agaaggaggc gggctacgac
     3841 ctgctcaaga tccacccggg cgtgagccgg gaagccttcg acacgctcgt gaccgtggcg
     3901 cgggccgtgg gcatccccta cgcgggtcac gtgccgacgg aggtgggcgt ggcccgggcc
     3961 atcgaggcga ggtacgcctc gatcgagcat ctggacggct acgtcgaggc gatggtccgt
     4021 gagggcgctc ccgtgggcgc cgacgagtcg gccttcttcg ggctcaacct cggcgagcac
     4081 ctggacgagt cgaagctgcc cgcgctggtg gcggcgacgc gcaaagccgg cgtctggaac
     4141 gtgccgaccc aggtgctgct ggagaatctg gtgctggccg gcagcagcgc ggagctggcg
     4201 cggcggcccg agatgcgcta cgtcgcgccg gagacgcggg cccagtgggc cgaggtcaag
     4261 gaaagcatgt tgcaggagac cggctccact ccggagtcgg cccgccgcac catcgcgatg
     4321 cgacgcaagc tgatcaaggc gctgcacgcg gccggcgcgg gactgttgct cggctccgac
     4381 gcgccccaga tctacaacgt gccgggcttt tcgacccatc gtgagctgga gtcgctggtg
     4441 gccgccggac tcacgcccta ccaggcgctg gagaccggga cccggaacat cgcgaagtac
     4501 ttcgggaccg agcgggagac gggaacggtg gagcagggca agcgcgccga cctcatcctg
     4561 ctggaggcgg atccgctggc ggacatccgc aatacgacga agcgggcggg cgtgatggtg
     4621 cgcgggcgct ggctcccgca ggcggagatc gagcggaggc tggcggcggt ggcgaaggcg
     4681 gcggggaact aggggcggcc cctacccccc gttcaggctc cgcaccagct ccgcgttcgt
     4741 ccgatggcgc cgcaggtcca ccagcagatc gttcatcgcg ttgatcgggg tcatcccggc
     4801 gatccgctgc cgcagcgccc gggaggcctc cagggtcggt gggtccagca gcagctcctc
     4861 gcgccgcgtg gcgctggcga cgaggtcgat cgccgggaag acccgccggt ccgccagctc
     4921 ccggctgagc accagctcgc tgttccccgt gccc
//
LOCUS       DASUYN010000483         3984 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_593355, whole genome shotgun sequence.
ACCESSION   DASUYN010000483 DASUYN010000000
VERSION     DASUYN010000483.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3984)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3984)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3984
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_593355"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..939
                     /locus_tag="VF061_09430"
     CDS             <1..939
                     /locus_tag="VF061_09430"
                     /inference="COORDINATES: protein motif:HMM:NF021537.4"
                     /note="predicted Zn-dependent protease with a strongly
                     conserved HExxH motif; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2268 domain-containing putative Zn-dependent
                     protease"
                     /protein_id="HEX6669768.1"
                     /translation="INLRPEFLAILEAHDREAAYRQYREAHRPILDAYWRNYVLDPDS
                     PHADEIVAAALKADRSDLLALASSTDVVHLAEEAVARAEAVLHLDRPTDIYLMVGLGG
                     ANAGELVVGGRGVAFICLEHFTGRVNPETYGMGLPPDLIPLWIGHELAHTVRYTSPRS
                     ASDMWRLVTDNGGYYDYWSTGSRATLRELLVNEGLAVHTAQAVAPGFAAAEYFGYARR
                     QYHRLREMEAFLRRVVEPELEQSGLGLRLRYLSGGMSPSARLVSGRVLPERAGYYLGY
                     RMTEALVAQRGLVEAVRAAAHEFQQAEDRANGVQSA"
     gene            complement(1023..2345)
                     /gene="mnmE"
                     /locus_tag="VF061_09435"
     CDS             complement(1023..2345)
                     /gene="mnmE"
                     /locus_tag="VF061_09435"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF003661.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HEX6669769.1"
                     /translation="MLSDPIAALATPPGRSALAVVRLSGQGAFEVAARVIQGFRADRP
                     RVATLAGFHHDGEPIDRGIYTVFPAPHSYTGEDMVELSCHGGQLAPASLLAALHGAGA
                     RPASPGEFTRRAVLNGKLDLLQAEAVGEMIDAVAPAQARAALRRLEGGLSQRIAELRE
                     SLVELQALLSYEIDFPGEDDGPVAPARIAEAVGEARERIGHLLATAPSPDRMRQGALL
                     VLAGRPNAGKSSLFNALLGTDRALVTEIPGTTRDAIEAHTDFLGWPVRLVDTAGLADS
                     RDRLERMGIEVSRRYLSAADLVLLCVESGRALAADEAALAAERPGLVVRTKRDLANGA
                     VEGLAVSSVTGEGIDQVRRAAAERVFGDRIALGDLEPTLGGERHREALARAGAALADA
                     AEHLAPGGDPVLVSHHVREATLALDELVGVVDVEEVLGRVFAGFCVGK"
     gene            complement(2356..>3984)
                     /gene="yidC"
                     /locus_tag="VF061_09440"
     CDS             complement(2356..>3984)
                     /gene="yidC"
                     /locus_tag="VF061_09440"
                     /inference="COORDINATES: protein motif:HMM:TIGR03593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0051205 - protein insertion into membrane
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HEX6669770.1"
                     /translation="SAAVAPGVVPDSPAVAPDADSAPRLQPAPEAPRDQTVAPSAAED
                     TVRVTSPLYTYGFSTRGARLVQAELQRYPSMAPGEQRRRAQIMPEGSDLLGLTVVRGR
                     DTVDFRDAIFTASTERLAVSAEASLRLAAERSGVRLELTYTFSPDDYRVEVSGRASDI
                     GPNGGTLLVGMGPTLANTEADVEENHRSLSLVTMRDDTERTDLGGLEPGEQRALSGPF
                     AWAALKSKYFVTGVIAADSAGGRIAGTTMQAAPGSDDPTAARIRVSMPLQPSGAFGYL
                     LYAGPMEYERLARLGYDFDDVNPYGWPGFRTIIRVFAVPVRWLLVWMHENLHLTYGLV
                     LVAFGILVRIVLWPLNQKAMRANMKLQEVQPLMKDIQDRYKSDPQKMQQEMFKLYREY
                     KVNPLGGCWPMLLPMPVLFALFFVFQNAIELRGTAFMWIPDLSRPDPLYIIPIVMGAS
                     MYVLTKVGQMGMEPNPQMKMMLYMMPLMMTGMFLFFPSGLNLYYTVSNIASIPQQWLL
                     GRERMKRTARAIVDVKTERPEPPRTAQGKKRKKA"
BASE COUNT          582 a         1451 c         1377 g          574 t
ORIGIN      
        1 atcaatctcc gtcccgagtt cctcgcgatt ctcgaggcgc acgatcgaga agccgcgtat
       61 cgtcagtacc gcgaagccca ccgccccatc ctcgacgcct actggcgcaa ctacgtcctc
      121 gaccccgaca gcccccacgc cgacgagatc gtcgccgccg cgctgaaggc ggaccggagc
      181 gatctgctcg cgctcgcgag ctcgaccgac gtggtgcacc tcgccgagga ggcagtggcg
      241 cgcgccgagg cggtgctcca tctcgaccgg ccgacggaca tctacctgat ggtgggattg
      301 gggggcgcga acgccgggga gctggtggtg ggcggccggg gcgtggcgtt catctgcctg
      361 gagcacttca ccgggcgggt caaccccgag acctacggca tgggcctccc gcccgacctg
      421 atcccgctct ggatcggcca cgagctggcg cacaccgtcc gctacacctc gccgcgcagc
      481 gcgagcgaca tgtggcgtct ggtcaccgac aacggcggct actacgacta ctggtccacc
      541 ggcagccggg ccacgctgcg cgagctcctg gtcaacgaag gcctcgcggt ccacacggcc
      601 caggccgtcg cccccggctt cgccgcggcc gagtacttcg gctacgcgcg gcggcagtat
      661 caccggctcc gggagatgga ggcctttctc cggcgcgtgg tggagcccga gctggagcag
      721 agcggtctcg gcctgcggct gcggtacctg tcgggcggca tgagcccctc tgcgcgcctg
      781 gtcagcggcc gcgtgctgcc cgagcgcgcc ggctactatc tcggctatcg gatgaccgag
      841 gcgctggtgg cgcagcgggg gctggtggag gccgtgcggg cggcggccca cgagttccag
      901 caggccgagg accgggccaa cggggtgcag tcggcctgaa aagagatgtc accctgagcg
      961 caacgaaggg ggccatgctc gatatggctc ccttcacttc gttcagggtg acaagatctc
     1021 gtttacttcc ccacgcagaa ccccgcgaac actcgcccca gcacctcctc cacgtccacc
     1081 acccccacca gctcgtccag cgccagcgtc gcctcgcgca cgtgatgcga caccagcacc
     1141 gggtccccac ccggcgcgag atgctcggcc gcatccgcca gggcggcgcc ggcccgggcc
     1201 agcgcctcgc gatgccgctc gccgcccagc gtcggctcga ggtcgccgag cgcgatccgg
     1261 tcgccgaaca cccgctccgc ggccgcccgc ctgacctggt cgatcccctc gcccgtgacc
     1321 gaggagaccg ccagcccctc gaccgctcca ttcgccaggt cgcgcttggt ccgcaccacc
     1381 aggccgggcc gctccgccgc gagggcggcc tcgtccgccg cgagggcgcg tcccgactcg
     1441 acgcacagca gcactaggtc cgccgccgag agataccgcc ggctcacctc gatccccatc
     1501 cgttccagcc ggtcgcgcga gtcggccagt ccggcggtat ccaccagccg cacgggccac
     1561 cccaggaaat cggtatgggc ttcgatcgcg tcccgcgtgg tccccggaat ctcggtgacg
     1621 agcgcccggt cggtacccag aagcgcgttg aagagggacg acttgccggc gttgggccgg
     1681 cccgcgagca ccagcagcgc cccctgccgc atgcggtcgg gcgagggggc ggtcgccagg
     1741 aggtgtccga tccgctcccg cgcctccccc accgcctccg cgatgcgcgc cggcgccacc
     1801 ggcccgtcgt cttcccccgg aaagtcgatc tcgtagctca ggagcgcctg cagttcgacc
     1861 agcgattccc gcagttcggc gatccgttgc gacagtccgc cctccagccg gcggagcgcg
     1921 gcccgggcct gcgcgggcgc caccgcatcg atcatctccc ccacggcctc agcctgcagc
     1981 aggtcgagct tgccgttcag caccgcgcgg cgggtgaact cgcccggcga ggcggggcgc
     2041 gccccggccc cgtggagcgc ggcgagcagg ctggccgggg cgagctggcc cccgtgacag
     2101 gagagctcga ccatgtcctc gccggtgtag ctatggggcg cggggaatac cgtgtagatc
     2161 ccgcggtcga tcggctcgcc gtcgtggtgg aagccggcga gggtggcgac ccgggggcgg
     2221 tcggcgcgaa agccctgaat caccctggcc gcgacctcga acgccccctg cccgctcagc
     2281 cgtacgaccg ccagcgccga gcgacccggc ggggtggcga gcgccgcgat gggatcggag
     2341 agcatgcggg tccggctacg ccttcttccg cttcttcccc tgtgcggtcc tcgggggctc
     2401 tggccgctcc gtcttcacat ccacgatcgc ccgggcggtg cgcttcatcc gctcccggcc
     2461 gagcagccac tgctggggga tgctcgcgat gttgctgacc gtgtagtaga ggttgagccc
     2521 cgacgggaag aagaggaaca tgcccgtcat catcagcggc atcatgtaga gcatcatctt
     2581 catctgcggg ttcggctcca tgcccatctg acccaccttg gtcaggacgt acatggacgc
     2641 ccccatgacg atggggatga tgtagagggg atccggccgg gagaggtcgg ggatccacat
     2701 gaacgcggtg ccccgcagct cgatcgcgtt ctggaagacg aagaacaggg cgaagagcac
     2761 cggcatgggc agcagcatgg gccagcagcc gcccagggga ttcaccttgt actcccggta
     2821 gagcttgaac atctcctgct gcatcttctg cgggtcgctc ttgtagcggt cctgaatgtc
     2881 cttcatgagc ggctgcactt cctgcagctt catgttggcc cgcatggcct tctggttgag
     2941 aggccagagg acgatccgca ccaggatgcc gaacgccacc agcaccagcc cgtaggtcag
     3001 gtgcaggttc tcgtgcatcc agaccagcag ccagcggacc ggcacggcga agacccggat
     3061 gatggtccgg aaaccgggcc agccgtaggg attcacgtcg tcgaagtcgt accccagccg
     3121 ggcgaggcgc tcgtactcca tcggtcccgc gtagagcagg tagccgaagg ccccgctggg
     3181 ctgcagcggc atgctgaccc ggatccgggc ggcggtcgga tcgtcggagc cgggcgcggc
     3241 ctgcatcgtg gtcccggcga tccggccccc ggcggaatcg gccgcgatca cgccggtgac
     3301 gaagtacttc gacttgagcg cggcccaggc gaaggggccg ctcagcgccc gctgctcgcc
     3361 cggctccagc ccgccgaggt cggtccgctc ggtgtcgtcg cgcatggtga ccagcgagag
     3421 cgagcggtgg ttctcctcga catcggcctc ggtattcgcc agcgtcgggc ccatgcccac
     3481 cagcagcgtc ccgccattgg ggccgatgtc ggaggcgcgt cccgacacct ccacccggta
     3541 gtcgtcgggc gagaaggtgt aggtcagctc cagccgcacg ccactccgct cggccgcgag
     3601 gcggagcgag gcctcggcgc tcacggcgag gcgctcggtg gaggccgtga agatcgcgtc
     3661 gcggaaatcc accgtatccc ggccgcgcac cacggtcagg cccaggaggt cgcttccctc
     3721 gggcatgatc tgggcgcgcc gtctctgctc gccgggggcc atcgaggggt agcgctggag
     3781 ctcggcctgc actagcctgg cgccccgggt gctgaagccg taggtgtaga gcggagacgt
     3841 gacccggacc gtgtcctcgg ccgcggacgg cgcgaccgtc tggtcgcgcg gcgcctcggg
     3901 cgcgggctgg agacgcggag cgctgtcggc gtccggcgcc acggcgggcg aatcgggcac
     3961 gacacccggc gcgacggccg cgct
//
LOCUS       DASUYN010000484         2204 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1256259, whole genome shotgun sequence.
ACCESSION   DASUYN010000484 DASUYN010000000
VERSION     DASUYN010000484.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2204)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2204)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2204
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1256259"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..282)
                     /locus_tag="VF061_09445"
     CDS             complement(<1..282)
                     /locus_tag="VF061_09445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669771.1"
                     /translation="MKLVDTDETVVLVTGSALTAEERDRPLAYRLKSEIDRRGEGHAY
                     RRAVVVADLWYLDNRIFHLNPTIAIGGPGANGVSEEFSSLLPTVYSREEQ"
     gene            complement(287..1165)
                     /locus_tag="VF061_09450"
     CDS             complement(287..1165)
                     /locus_tag="VF061_09450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669772.1"
                     /translation="MRPPPDLDRLRRRGRTPWVAIGVSAAAHAALLLFGRINGRLPEI
                     PSRPAQLVVLAPPAEGPREVPMVFRRGDEPTGRRGPGPAPAPAPPRPEPESPLVVEER
                     APQPDAEPVDTGAAPAARRRPPMIGRIGPGLAEGRLWVRPLPLPPKELAERLTQQKHT
                     ELVDSAVDAIVQAYLDSIAADPAARKPGLPSWTTNVAGKKFGLDSSNIYIAGLKIPAA
                     VLALLPIPAGNIDQNRAYNHLMAMRADLQYAAQRSQNLQEFKDMIRDMRLRKEREEEF
                     ERNQRTAPPPAEPPTP"
     gene            complement(1149..>2204)
                     /locus_tag="VF061_09455"
     CDS             complement(1149..>2204)
                     /locus_tag="VF061_09455"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX6669773.1"
                     /translation="LAIEAMHEALADPAYSKYGFQQGLLAFRQSASRWVERRFGRRFD
                     PVTEVLPLIGSKDGLSHLPFAVVNPGDVTIVPEPGYQAYLGGSILAGADPYIAPLLRE
                     QGFLLELERIPEAVLRRAKLAFVNYPNNPTAAVATPEYLERTVAACRRHGILLAYDNA
                     YCDLTFDGYRAPSIFEIPGADDVALEFFSLSKSFSMTGWRLGFAVGRAELIGALTRVK
                     SYVDTGPFLAVQRAGAAVLDAADAIVAPIREELQHRRDAAVPALREAGFAVESPKAAM
                     YLWVALPEGLSSAGFARRALEETGAVVLPGSAFGPAGEGYFRIALTVGPDRLREAAGR
                     LGRVFQASRSGELATTA"
BASE COUNT          312 a          801 c          780 g          311 t
ORIGIN      
        1 ctgctcctcc cggctgtaga cggtcggcag cagcgacgag aactcctccg agactccgtt
       61 cgcccccggc ccgccgatgg cgatggtggg gttcaggtgg aagatccggt tgtcgagata
      121 ccatagatcc gccaccacca ccgcgcgccg gtacgcgtgg ccttctcccc gccggtcgat
      181 ctccgacttc agccggtaag cgagcggacg atcgcgctcc tcggcggtca gcgctgagcc
      241 ggtcaccagg accaccgtct cgtccgtgtc caccagtttc atgcggtcac ggggtcggcg
      301 gctcggccgg cggtggtgcg gtgcgctggt tccgctcgaa ctcctcctcc cgttccttcc
      361 gcagccgcat gtcgcgaatc atgtccttga actcctggag attctgcgag cgctgcgcgg
      421 cgtactggag gtcggcgcgc atcgccatga ggtgattgta ggcccggttc tggtcgatgt
      481 tgccggcggg gatggggaga agcgccagca cggcagccgg gatcttgagc ccggcgatgt
      541 agatgttgga ggagtccagg ccgaacttct tccccgccac gttggtcgtc cagcttggta
      601 ggccgggctt gcgggcggcg ggatcggccg cgatcgagtc gaggtaggcc tgcacgatcg
      661 cgtccaccgc gctgtccacc agctccgtat gcttctgctg ggtgaggcgc tccgccagct
      721 ccttgggcgg aagcggcagc ggccgcaccc agagacgccc ctccgccaga cccggaccga
      781 tccggccgat catgggcggc cgccgccgcg ccgcgggtgc ggcgcccgtg tccaccggct
      841 cggcgtccgg ctgcggcgcg cgctcctcca cgaccagcgg ggactcgggc tccggccgtg
      901 ggggggccgg tgcgggcgcc gggcccgggc cgcgccgacc ggtcggctcg tcgccccggc
      961 ggaagaccat cggcacctcg cgcggacctt ccgccggcgg cgcgagcacc accagctgcg
     1021 cgggtcgact cggtatctcc ggcaatcggc cgttgatccg cccgaacagg agcagcgcgg
     1081 catgggcggc cgcgctcacc ccgatcgcga cccagggcgt gcgcccgcga cggcggagcc
     1141 tgtcgaggtc aggcggtggt cgcaagctcc ccgctccggc tggcctggaa cacccggccc
     1201 agccggcccg ccgcctcgcg cagccggtcg ggaccgacgg tgagagcgat cctgaaatag
     1261 ccctcgccgg cgggaccgaa cgcgctgccc gggagcacca cggcgccggt ttcctccagc
     1321 gcccggcggg cgaatccggc cgacgacaga ccctccggga gcgccaccca caggtacatc
     1381 gccgccttgg gcgactccac cgcgaatccg gcctcgcgca gcgccggcac cgccgcgtcc
     1441 cggcggtgct gcagctcctc ccggatcggg gcgacgatcg cgtccgccgc gtcgagcacc
     1501 gcggcgcccg cccgctgcac cgcgaggaac ggccccgtgt ccacgtagga cttcacccgg
     1561 gtgagcgcgc cgatcagctc ggcccggccc acggcgaagc cgagccgcca gccggtcatc
     1621 gagaagctct tggagagcga gaagaactcc agcgcgacgt catccgcgcc cgggatctcg
     1681 aagatgctgg gtgcgcggta gccgtcgaag gtgagatcgc agtaggcgtt gtcgtacgcc
     1741 agcaggatcc catgacgccg gcaggccgcc accgtgcgct ccaggtactc cggcgtcgcg
     1801 accgccgcgg tggggttgtt ggggtaattg acgaaggcga gcttggcccg gcgcagcacc
     1861 gcctcgggaa tccgttccag ctccagcagg aagccctgct cccgcagcag cggcgcgatg
     1921 tagggatccg cgccggcgag aatcgagccc ccgagatacg cctgataacc cggctcgggg
     1981 acgatggtga catcgccggg gttgaccacc gcgaagggca ggtgcgacag gccgtccttg
     2041 gagccgatga gcggcagcac ttcggtgacc gggtcgaagc gccgtccgaa acggcgctcg
     2101 acccaccggc tcgccgactg gcggaacgcc agcagtccct gctggaagcc gtacttgctg
     2161 taggcgggat ccgcgagcgc ctcgtgcatc gcctcgatcg ccag
//
LOCUS       DASUYN010000485         2499 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_152565, whole genome shotgun sequence.
ACCESSION   DASUYN010000485 DASUYN010000000
VERSION     DASUYN010000485.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2499)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2499)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2499
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152565"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(715..1998)
                     /gene="clpX"
                     /locus_tag="VF061_09460"
     CDS             complement(715..1998)
                     /gene="clpX"
                     /locus_tag="VF061_09460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HEX6669774.1"
                     /translation="MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNE
                     IIEEELSESSELKFDELPKPAEIFDFLNQYVVGQDTAKKQLSVAVYNHYKRVQAGGDA
                     GPRASESQVELAKSNILLLGPTGCGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
                     VENILLKLIQAADYDVKRAETGIIYLDEVDKIARKSENPSITRDVSGEGVQQALLKIL
                     EGTTASVPPQGGRKHPHQEFIQIDTTNVLFIVGGAFAGLEKIIEARVGRKGIGFGAEL
                     RSKFDVDSSDVFGDVMPEDLLKFGMIPEFIGRLPVITSVRNLDREALICILTEPRNAL
                     TRQYGKLFELDGVELEFSDDALEAIADQAILRGTGARGLRAIMEEVLLSVMYEVPSRD
                     DVARVVITREAVLEHVNPTIVPRETPKRERREKSA"
     gene            complement(2165..>2499)
                     /locus_tag="VF061_09465"
     CDS             complement(2165..>2499)
                     /locus_tag="VF061_09465"
                     /inference="COORDINATES: protein motif:HMM:NF012783.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-dependent Clp protease proteolytic subunit"
                     /protein_id="HEX6669775.1"
                     /translation="VCMGQAASAAAVLLAAGTPGKRAALEHARVLIHQPSAEGQGQVS
                     DLEIQAAEILRMRRLEEKILARHTGRTEEQVRADIERDTILTAEQAKEYGFIDDVITT
                     RKLSELKT"
BASE COUNT          342 a          935 c          839 g          383 t
ORIGIN      
        1 gctcggcgag ctgcgggctg acctgcggtc cacgatgcgc cgggacatgc gagagatcct
       61 ggaaggaccg gccggtcgcc ctcgcgccgg tgacggcgtc cccacctgag cccacgccac
      121 gtcaagcccg caacgacagt ccccatgcca gctcgccacg cgaggccggc acgctggtcc
      181 cccacgccag cctccgagcc agcccggcac gccagccccg gcacgccgga ccgccacgcc
      241 cgtccgccac gcccgcctcg cgccgcatca gcccgacgcc gggtcgcacc gcgagccgtc
      301 gatgccgagt cgcctcgccg accacatcgc cgggcggatc agttgggcgg ctcgccgggt
      361 ggccgtcgcc agccggtccc cgtcgcaggc gaccacgccg cgtgatcgcc ggcccgcccg
      421 ttggccgccg ggcggcgcga acacggccct cacgagcgcg cagatcaccg ctgcgcaccg
      481 ggccgccggg cgccaacaca gccccgagga gcgcgcagat caccgctgcg caccgggccg
      541 ccgggcgcca acacagcccc gacgagcgcg cggatcactc ctgcgcgccg gctcgctcag
      601 aaacggcccg gagccggcgt gtcgaaacga ggacccgcgc aaaggtgatc ggctcctggc
      661 acaccggtgc cagcggtgga gcgccagcgg agcaggcggg acgaagcgcg ccgactacgc
      721 cgacttctcg cgccgctccc gcttcggcgt ctcccgcggg acgatcgtcg ggttgacgtg
      781 ctccagcacg gcctcccggg tgatcaccac tcgggccacg tcgtcccggc tcggcacctc
      841 gtacatcacc gagagcagga cctcttccat gatcgcccgc agtccgcggg cgccggtccc
      901 acgcaggatc gcctggtcgg cgatcgcctc cagcgcgtcg tcgctgaact caagctcgac
      961 cccgtcgagc tcgaagagct tcccgtactg cctggtcagc gcgttgcgcg gctcggtgag
     1021 gatgcagatg agcgcctcgc ggtcgaggtt gcgcacgctg gtgatcaccg gcagccggcc
     1081 gatgaactcc gggatcatgc cgaacttgag caggtcctcc ggcatgacgt cgccgaagac
     1141 gtcggaggag tccacgtcga acttgctgcg cagctcggcg ccgaagccga tgcccttgcg
     1201 cccgacccgc gcctcgatga tcttctccag cccggcgaac gcgccgccga cgatgaagag
     1261 cacgttggtg gtgtcgatct ggatgaactc ctggtgcggg tgcttgcgcc cgccctgcgg
     1321 cggcaccgag gcggtggtgc cctccaggat cttcagcagc gcctgctgga cgccctcgcc
     1381 ggagacgtcc cgggtgatcg acgggttctc gctcttgcgg gcgatcttgt cgacctcgtc
     1441 gaggtagatg atccccgtct cggcccgctt gacgtcgtag tcggccgcct ggatcagctt
     1501 gagcaggatg ttctcgacgt cctcgccgac gtacccggcc tcggtcagcg ccgtggcgtc
     1561 cgcgatggcg aagggtacgt tgagcatccg ggcgagcgtc tgagcgagca gtgtcttgcc
     1621 gcagccggtc gggccgagca gcaggatgtt ggacttcgcc agctcgacct ggctctcgga
     1681 cgcgcggggg ccggcgtcgc cgcccgcctg cacccgcttg tagtggttgt agaccgctac
     1741 ggacagctgc ttcttggcgg tgtcctggcc caccacgtac tggttgagga agtcgaagat
     1801 ctcggccggc ttgggcagct cgtcgaactt cagctcggag gactcggaga gctcctcctc
     1861 gatgatctcg ttgcagaggt cgatgcactc gtcacagatg tacacgccgg gaccggcgat
     1921 gagcttcttc acctgcttct gggacttgcc gcagaaggag cacttcagca gatcaccgcc
     1981 gtctccgatg cgtgccacct acgaccctct ccctctcggg caccgggccg ctgagccggt
     2041 gcattcgttg acgctacctc ctccgagcac ggatgcaccc ccctttcggg cgcggcgcgg
     2101 ccgctgccgc cccgatcacc cggacggccc tgcggtccgc accacccggg ccgccgcgtc
     2161 gcgctcaggt cttgagctcg ctcagcttgc gggtggtgat cacgtcgtcg atgaagccgt
     2221 actccttcgc ctgctcggcg gtgaggatgg tgtcccgctc gatgtccgcg cggacctgct
     2281 cctcggtgcg gccggtgtgc cgggccagga tcttctcctc cagccggcgc atccgcagga
     2341 tctcggcggc ctggatctcc aggtcgctga cctggccctg gccctccgcg gacggctggt
     2401 ggatgagcac ccgggcgtgc tccagggcgg cccgcttgcc cggcgtgccg gcggccagca
     2461 gcacggccgc ggcggatgcg gcctgcccca tgcagacgg
//
LOCUS       DASUYN010000486         2955 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_152574, whole genome shotgun sequence.
ACCESSION   DASUYN010000486 DASUYN010000000
VERSION     DASUYN010000486.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2955)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2955)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2955
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152574"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2031
                     /locus_tag="VF061_09470"
     CDS             <1..2031
                     /locus_tag="VF061_09470"
                     /inference="COORDINATES: protein motif:HMM:NF016612.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="neutral/alkaline non-lysosomal ceramidase
                     N-terminal domain-containing protein"
                     /protein_id="HEX6669776.1"
                     /translation="PGAALVAGFGRADITPPPGLGLAGNGSEGSQSRGHRLRLYARAL
                     ALSDRSGGRLAIVVTDLPLGSALLHRRVAAITGPAAGIGVDRLVVAATHTHAGPGHFF
                     EGAVFNDQGSSVSGFDERVLDSLAHRVARAVLMAVDSLRPARAAWGSRSVWGLTRIRS
                     LPALLRNIPMPVAAESSPATLLPEYRLVDPEMAMLRVDLLDAATGRYRPAGALTIFAM
                     HGTGNAPVNDLNDGDIHGIVARRLERHIDGRRGLADTSFVPVGVHLFANGATGDVSPA
                     WPPQSRCTAPQLAPLATPNGPFVRSLWHWKPPGRRQVADCTRAARAAADYVGRDLGDS
                     AIALFESLEGSLGDDLTLARAFVTLPLARKADSLGVCPEPAVGMSTLVGADDAHSRME
                     GWRLLGVLDIGLTQGPSSPNPDAGDCQAPKRKLLDALFGSLPNRLFVKDGLPRFAQLT
                     VLRLGDRVIGVVPLEITTTAGRRVRARMLAAADSAGLSIRRAHILGLANGHLAYLTTA
                     EEYSAQYYEGGSTLYGPGEAATIERALAGLTRSLSNRDELPPVVAPPETLAVGHVKKR
                     LPRPPNARGDLPSRVAAPVCSGDTLVAMIRLGHASRWPVDSGNVGAALTTVTDEAGRP
                     VARDDDPSLELRLRRAERHASWWELRWVVPRRGWYRVRARQSDPSDPVECGP"
     gene            2087..>2955
                     /locus_tag="VF061_09475"
     CDS             2087..>2955
                     /locus_tag="VF061_09475"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEX6669777.1"
                     /translation="MTFLGWVALSGAVLLLMALSSAFLRNLPISTSTIYLALGIVIGP
                     VGFGWLRVDLREAVPWLERLTEIAVVVALFVGGLKLRLPLRHPAWKAAYVLAGPVMIA
                     SIVGVALCARLLLGVDTATALLLGAVLAPTDPVLAGTVKVNSAEDHDRVRYGLSGEAG
                     LNDGMAFPFVILGLLWAASGGPGEWITGWAIERLLWAVPAGLLLGFVLGRGVGRLAIH
                     LRSRQRDTGAPSDFLALALIALSYVGAEAIGAWGFLATFAAGAGLRHAELHVTLDTPH
                     PDQAEAVARASDDP"
BASE COUNT          369 a         1077 c         1065 g          444 t
ORIGIN      
        1 cccggcgcgg cgctggtcgc cggcttcggc cgcgcggaca tcacgccgcc gccagggctg
       61 ggactcgccg gcaacggatc cgaggggagc cagtcgcggg gacaccggct gcggctgtac
      121 gcccgcgccc tcgcgctctc cgaccgctca ggcggccggc tcgccatcgt ggtgaccgat
      181 cttccgctgg gctccgcgct gctccatcgc cgggtagccg ccatcaccgg acctgccgca
      241 gggatcggag tcgatcggct cgtggtggct gccacgcata cccatgccgg gccgggccac
      301 ttcttcgagg gggcggtctt caacgaccag gggagctcgg tctccgggtt cgacgagcgg
      361 gtgctggact cgctggccca cagggtcgcc cgcgcggtcc tcatggcggt ggacagcctg
      421 aggccggcga gagcggcctg gggcagccgc tcggtctggg ggctcacccg catccgcagc
      481 ctgcccgcgt tgctgcggaa cattcccatg ccggtggccg cggagagctc gcccgcgacg
      541 ctcctcccgg agtaccggct ggtggatccc gaaatggcga tgctgcgggt ggatctgctg
      601 gatgccgcca cggggaggta tcgccccgcc ggtgcgctca cgatcttcgc gatgcacggc
      661 accggcaacg cgccggtgaa cgatctgaac gacggagaca tccacggcat cgtcgcgcgg
      721 cgactcgagc ggcacatcga cgggcggcgg ggcctggcgg acaccagctt cgtcccggtc
      781 ggcgtccacc tgttcgcgaa cggcgcgacg ggtgacgtct ccccggcgtg gccgccgcag
      841 agccggtgca cggcgcccca gctcgcaccg ctcgccaccc ccaacggacc gttcgtccgc
      901 agcctctggc actggaagcc cccgggccgg cgtcaggtcg ccgactgcac ccgcgcggcg
      961 cgagcggcgg cggactacgt cgggcgagac ctcggagaca gcgccatcgc cctgttcgag
     1021 tcgctcgagg gctccctggg tgacgacctg acgctggcgc gcgccttcgt gacgctgccg
     1081 ctggcccgaa aggccgactc gctcggggtg tgtccggagc cggccgtggg catgtccacc
     1141 ctggtcggcg cggacgacgc ccacagccgg atggagggct ggcgactcct gggagtgctc
     1201 gacatcgggc tgacgcaggg acccagcagc ccgaaccccg acgcagggga ctgccaggcg
     1261 ccgaagcgca aactgctcga cgccctcttc ggatcgctcc ccaaccgtct cttcgtcaag
     1321 gacgggctcc cccgattcgc ccagctgacc gtcctgcgcc tcggcgatcg agtgatcggt
     1381 gtcgtgccgc tggagatcac caccaccgct ggccgtcgcg ttcgggcccg gatgctcgcg
     1441 gccgcggact cggccggact ctccatccga cgcgcacaca tcctggggct ggcgaacgga
     1501 cacctcgcct atctcacgac cgccgaggag tacagtgccc agtactacga gggcggctcc
     1561 accctgtacg gtccgggcga agcggccacg atcgagcggg cgctcgccgg gctcacccgc
     1621 tcgctctcga accgggacga gctgcccccg gtcgtggctc caccggagac gctggcggtg
     1681 ggccacgtca agaagcgttt gccgcgcccg cccaacgccc gaggggacct gccgagccgc
     1741 gtcgccgcgc ccgtctgctc gggtgatacg ctggtggcga tgatccggct ggggcatgcc
     1801 agccgctggc cggtggacag cggcaacgtg ggagcggcac tgacgacggt gaccgatgaa
     1861 gccggacggc ccgtggcccg ggatgacgac ccgtcgctcg agctccgtct ccggagggcg
     1921 gagcgccacg cgagctggtg ggagctgcgc tgggtggtgc cgcggcgggg ctggtaccgg
     1981 gtgcgggcga ggcaatcgga cccgagcgat ccagtggagt gtggcccctg agcgccggcg
     2041 tcgctccaga cgacggtatg tccggcaggc cgccttagat tggtgaatga ccttcctcgg
     2101 ctgggtggct ctcagcgggg cggtgctgct gctcatggca ctgtcctccg ccttcctgcg
     2161 caaccttccc atctccacgt cgaccatcta cctcgccctt ggcatcgtca tcgggccggt
     2221 gggattcggc tggctgcgtg tcgaccttcg cgaggcggta ccctggctcg agcggctgac
     2281 ggagatcgcc gtcgtcgtcg cgctgttcgt cggggggctc aagctccgcc tgccgctccg
     2341 gcacccggcc tggaaggcgg cgtacgtcct cgccggtccc gtcatgatcg cgtccatcgt
     2401 cggcgtcgcg ctctgcgcca ggctgctgct gggcgtagac accgccaccg cgctcctgct
     2461 cggcgcggtg ctggcgccca ccgatccggt gctggccggc accgtcaagg tgaacagcgc
     2521 ggaggaccac gatcgggtgc gctatggact ctcgggcgag gcggggctca acgatgggat
     2581 ggcgttcccc ttcgtgatcc tgggcctgct ctgggctgcg tcgggtggtc ctggcgagtg
     2641 gatcaccggc tgggcgatcg agcggctgct ctgggcggtg cccgccggtc tcctgctcgg
     2701 cttcgttctg ggacgcggcg tcggccgact cgcgatccat ctgcgcagcc gccagcgcga
     2761 caccggggcg cccagcgact tcctcgccct ggccctgatc gcgctctcct acgtcggcgc
     2821 ggaggcgatc ggcgcctggg gcttcctggc caccttcgcc gccggcgcgg ggctccgcca
     2881 cgccgagctg cacgtcaccc tggatacgcc gcaccccgat caggcggagg cggtggcccg
     2941 ggcgagcgac gaccc
//
LOCUS       DASUYN010000487         2205 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1036947, whole genome shotgun sequence.
ACCESSION   DASUYN010000487 DASUYN010000000
VERSION     DASUYN010000487.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2205)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2205)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2205
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1036947"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1311
                     /gene="ettA"
                     /locus_tag="VF061_09480"
     CDS             <1..1311
                     /gene="ettA"
                     /locus_tag="VF061_09480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0045900 - negative regulation of
                     translational elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HEX6669778.1"
                     /translation="RLLEKQGNLQERIDALGLWELDHKIDLAMDALRLPPGDADVSRI
                     SGGERRRVALCRLLLEQPDMLLLDEPTNHLDAESVWWLERYLAEFKGTVVAVTHDRYF
                     LDNVAGWILELYQGAGIPWEGNYSSWLEQKERRLAQEEKQVSARQKTLQHELEWIRMS
                     PRARQAKSKARITRYEELREEAARQTEGSAEILIPVPERLGDEVVVAEGLTKGFGDRL
                     LIDDLSFSLPRGGIVGVIGPNGAGKTTLFRMITGQEEPDGGALKVGSTVQVAYVDQSR
                     DALDPERSVYEEISGGQDQLQFGRRTVNARAYAAGFNFRGADQQKKVGTLSGGERNRL
                     HLAKLLRSGGNLLLLDEPTNDLDVDTLRALEEALLTFAGCAVVISHDRWFLDRIATHI
                     LAFEGDSEVVWFEGNYQDYAADLKRRKGVEAGQPHRIRYKKLVR"
     gene            1518..>2205
                     /locus_tag="VF061_09485"
     CDS             1518..>2205
                     /locus_tag="VF061_09485"
                     /inference="COORDINATES: protein motif:HMM:NF023325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3417 domain-containing protein"
                     /protein_id="HEX6669779.1"
                     /translation="MTQHAAHIPYLPARIEGLATLAKNLWWSWNRDARGLFRSIDPTL
                     WGVTRHNPLELLCRADPESVAACASDADFLRRYDDVMTKLHHETTSRDTWFTQHYGEL
                     DGRPVAYFCAEFGLHSSVPIYSGGLGVLAGDHCKAASDVGVPLVGVGLMYMKGYFDQR
                     LRLDGWQEDSDDEYDISVTPLEPVVGPQGRPYLATVETSGRPVHVRAWRMMVGRVPIY
                     LLDTNLDVNHA"
BASE COUNT          357 a          764 c          761 g          323 t
ORIGIN      
        1 cggctgctgg agaagcaggg caacctccag gagcggatcg acgccctcgg gctctgggag
       61 ctcgaccaca agatcgacct cgcgatggac gcgctgcggc tcccgcccgg cgacgccgac
      121 gtgagccgga tctcgggcgg cgagcggcgc cgggtggcgc tctgccggct gctgctggag
      181 cagcccgaca tgctgttgct ggacgagccc accaatcatc tcgacgccga gagcgtctgg
      241 tggctggagc gctacctggc cgagttcaag ggcacggtcg tcgccgtcac ccacgaccgg
      301 tatttcctcg acaacgtcgc cggctggatc ctcgagctgt accagggcgc ggggattccc
      361 tgggagggga actactcctc ctggctggag cagaaggagc ggcggctggc ccaggaggag
      421 aagcaggtct ccgcgcggca gaagacgctc cagcacgagc tcgagtggat ccggatgtcg
      481 ccccgcgccc ggcaggccaa gagcaaggcc cgcatcaccc gctacgagga gctgcgggag
      541 gaggcggcgc gacagaccga gggaagcgcg gagatcctga tcccggtgcc cgagcgcctg
      601 ggcgacgagg tggtggtggc cgagggcctg accaagggct tcggcgaccg gctcctgatc
      661 gacgacctga gcttctcgct gccccgcggc ggcatcgtgg gcgtgatcgg acccaacggc
      721 gccggcaaga cgacgctctt tcggatgatc acgggccagg aggagccgga cggcggcgcc
      781 ctgaaggtgg ggtccacggt gcaggtggcc tacgtggatc agagccgcga cgcgctcgac
      841 ccggagcggt cggtctacga ggagatctcc ggcgggcagg accagctcca gttcggccgc
      901 cggaccgtga acgcgcgggc gtacgccgcg ggcttcaact tccgcggcgc cgaccagcag
      961 aagaaggtcg gcaccctctc cggcggcgag cgcaaccggc tccacctcgc caagctgctc
     1021 cgcagcggcg ggaacctgct cctgctcgac gagcccacca acgatctcga cgtggacacc
     1081 ctgcgggcgc tggaggaggc cctgctcacc ttcgcgggct gtgcggtcgt catcagccac
     1141 gaccgctggt tcctcgaccg gatcgcgacc cacatcctgg ccttcgaggg ggacagcgag
     1201 gtggtctggt tcgagggcaa ctaccaggac tacgcggcgg atctcaagcg ccggaagggc
     1261 gtcgaggcgg gacagcccca ccggatccgg tacaagaagc tggtgcggta ggcggtaagg
     1321 cggtagggcg gtaaggcggt ggtgttcgct cgagctgtgc gagggatcgt tcggcacgca
     1381 cccgggattc ggagagaagg ttgcctgcga ttccctccca tgccgtaccg tcttaccatc
     1441 ttaccgtctt accgccttac cgccctgccg gcccatcccc tccgccgttc cccctgcccc
     1501 cgctatacta ccgccctatg actcagcatg ccgcccacat tccgtatctc cccgcccgca
     1561 tcgaagggct cgccaccctc gcgaagaacc tgtggtggag ctggaatcgc gacgcgcgcg
     1621 ggctgttccg cagcatcgac ccgacgctgt ggggcgtgac ccgccacaat ccgctggagc
     1681 tgctctgccg cgcggacccc gagagcgtgg cggcctgcgc cagcgacgcg gatttcctcc
     1741 gccgctacga cgacgtcatg accaagctgc accacgagac caccagccgg gatacctggt
     1801 tcacccagca ctacggtgag ctcgacggcc gccccgtggc ctacttctgc gccgagttcg
     1861 gcctccacag ctcggtcccg atctactccg gcggcctcgg cgtgctcgcg ggagaccact
     1921 gcaaggcggc gagcgacgtc ggcgttccgc tggtgggcgt cggcctgatg tacatgaagg
     1981 gctacttcga ccagcggctc cggctggacg gatggcagga ggacagcgac gacgagtacg
     2041 acatctcggt gacgccgctc gagccggtcg tcggtcccca gggacgcccc tatctcgcca
     2101 cggtcgagac ctcgggacgc ccggtgcacg tgcgggcgtg gcggatgatg gtcggccgtg
     2161 tgccgatcta cctgctcgat accaacctcg acgtcaacca cgccg
//
LOCUS       DASUYN010000488         3185 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1479082, whole genome shotgun sequence.
ACCESSION   DASUYN010000488 DASUYN010000000
VERSION     DASUYN010000488.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3185)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3185)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3185
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1479082"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(170..1279)
                     /locus_tag="VF061_09490"
     CDS             complement(170..1279)
                     /locus_tag="VF061_09490"
                     /inference="COORDINATES: protein motif:HMM:TIGR00238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KamA family radical SAM protein"
                     /protein_id="HEX6669780.1"
                     /translation="METWQEVLRKNSIASLEVLAERFGPENFPELGRLRQAAESFEFR
                     ISPAMVDLIKSPDDPIWRQYVPSVEELDVRDGIVDSLNEDADSPVPNITHRYPDRALF
                     LVSPVCATYCRFCTRRRKVGDPEKIPMSQFESAFQYLEQHSEIRDVIMSGGDPLLLND
                     RRLEAILTRLRAIPHLQIIRIGSRIPCHLPERITPELCATLKRFHPLFINTHFNHPDE
                     LTPAAVKALGMLADAGIPLGCQTVLLKGVNDDPEVMKELMQRLLMARVRPYYIYMADQ
                     VAGAEHFRTTVQAGIRVMEALRGWTSGLANPHFVIDAPGGGGKIPLLPEYVISMTDEE
                     VVLRNFRGDRYVYRQPREELSISRKRSSRPRRKSA"
     gene            complement(1286..1777)
                     /locus_tag="VF061_09495"
     CDS             complement(1286..1777)
                     /locus_tag="VF061_09495"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX6669781.1"
                     /translation="MSGTLTAPALRPLTAADRRRIEEITRAVRVFRDDELPVALEVFD
                     GAVAGSPDYTALGAVLDGRLVGWICWGPTPCTLGTYDLYWMAVDPAAQGAGIGSVLLR
                     AMEGRLAGSARLIVVETAGRPDYRPTRSFYEARGYRRAAVIPDFYAPGDDQVVYLKTL
                     TTG"
     gene            complement(1774..2784)
                     /locus_tag="VF061_09500"
     CDS             complement(1774..2784)
                     /locus_tag="VF061_09500"
                     /inference="COORDINATES: protein motif:HMM:NF019121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669782.1"
                     /translation="MRVAILYDAGSDEWSPQDVAAVVGNVHEVRDVLRRRGHEVELLP
                     VRMGDFRWLNRVRRADLVFNLCEGVNGHARFEDYVVGTLELAGVPFTGCRHWATTIAH
                     RKHVANTLLSAAGLPVPAFTLAQANKTPSEFPLPAIVKPAAEDASVGIDNGAVCTSKR
                     ALKKRVALMLEQFEEVLVQEYVPGREFNVGFVGKRMLPIAEIRFDGMPEGTWPIVSYA
                     AKWIPGSAEDEGTLPVCPAEMPEDLETAVTRVAREAWTYVSSGEGYGRVDLRVNGDGV
                     PYVLEVNPCPDLSSNAGLARMGRAFGWSYDDLVMHIVDEALMRSQSHRAAAALVSGVS
                     AA"
     gene            complement(2784..>3185)
                     /locus_tag="VF061_09505"
     CDS             complement(2784..>3185)
                     /locus_tag="VF061_09505"
                     /inference="COORDINATES: protein motif:HMM:NF019121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669783.1"
                     /translation="GMRFDTLPEGAPPIYGYEAKWLWDSPSHPLEIFDCPARIPEELA
                     GQVRAVALAAYHALECRDWCRVDVRCDAAGRPMVVELNPLPGILPDPRDNSCFPKAAR
                     AAGMSYDDLIRTVADIAWRRISGRSLLAEVA"
BASE COUNT          490 a         1073 c         1136 g          486 t
ORIGIN      
        1 gacgcgccgg cgatcttcct ctacgcgccg tcgcatacgg cggtggtgtc ccggcgaatc
       61 gaaaacgtgg agatcgaccc gtacaactgg gccggcggcc tcgggagctg gcgggcgaac
      121 ccgccggctc cgcggtagtg aagtcgcgtc ggagccgggt cgccgccttt caggcgctct
      181 tgcgtctcgg gcgcgaggac cgcttccggc tgatcgacag ttcctcccgg ggctgccggt
      241 agacgtaccg gtcgccccgg aagttgcgga gcacgacctc ctcgtccgtc atgctgatca
      301 cgtactccgg caggagcgga atcttgccgc cgcccccggg ggcatcgatc acgaagtgcg
      361 gattggcgag accgctggtc cagccgcgga gggcctccat gacccggatc cccgcctgga
      421 ccgtggtccg gaagtgctcc gccccggcca cctggtcggc catgtagatg tagtagggcc
      481 ggacccgcgc catcagcaac cgctgcatca gctccttcat cacctcggga tcgtcgttca
      541 cgcccttgag cagcacggtc tggcagccga gcgggatgcc ggcgtcggcc agcatgccga
      601 gcgccttcac ggcggcaggg gtgagctcgt ccgggtgatt gaagtgggtg ttgatgaaca
      661 gcgggtggaa ccgcttcagg gtagcgcaga gctcgggcgt gatccgctcc ggcaggtggc
      721 aggggatccg gctcccgatc cggatgatct ggagatgcgg gatcgcccgc aggcgggtga
      781 ggatcgcctc cagccggcgg tcgttgagca gcagcgggtc gccgccggac atgatgacgt
      841 cccggatctc cgagtgctgc tccaggtact ggaaggcact ctcgaactgc gacatcggga
      901 tcttctccgg gtcgcccacc ttccgccggc gggtgcagaa gcggcagtag gtggcgcaga
      961 ccggagagac caggaagagg gcccggtcgg ggtaccggtg ggtgatgttg gggaccgggg
     1021 agtcggcgtc ctcgttgagc gagtcgacga ttccgtcccg cacgtccagc tcctcgacgc
     1081 tgggcacgta ctggcgccag atcggatcgt ccggtgactt gatcaggtcc accatcgccg
     1141 gcgagatccg gaactcgaaa ctctccgccg cctggcggag gcggccgagc tcggggaagt
     1201 tctccggccc gaaccgctcg gccaggacct cgagcgaggc tatcgagttc tttctgagga
     1261 cttcctgcca ggtctccatg acgcgctacc ctgtggtgag agtcttcagg tacacgacct
     1321 gatcgtcgcc gggagcgtag aagtcgggga tcacggccgc gcgccggtag cctcgggcct
     1381 cgtagaagga gcgggttggc cggtagtcgg gtcgcccggc cgtctccacg acgatgagcc
     1441 gtgcagaccc ggccagccgg ccttccattg ctcgcagcag gacggagccg atcccggcac
     1501 cctgtgccgc cgggtccacc gccatccagt agagatcgta ggtgcccagg gtgcaggggg
     1561 tcggacccca gcagatccac ccgacgagcc gcccgtcgag cacggcgccg agcgcggtgt
     1621 aatcgggaga gcccgcgacc gcgccgtcga agacctccag ggcgacggga agctcgtcgt
     1681 cccggaagac gcggaccgca cgggtgatct cctcgatgcg gcggcggtca gccgcggtga
     1741 ggggtcggag cgccggcgcc gtgagggtgc cgctcacgcg gcggacaccc cgctgacgag
     1801 ggcggcggcc gcgcggtggc tctgggagcg catcagggct tcgtccacga tgtgcatcac
     1861 caggtcgtcg tagctccagc cgaacgcccg gcccatgcgg gcgagccccg cgttgctgga
     1921 gagatcgggg caggggttca cctcgaggac gtagggcacg ccgtcgccgt tgacccgcag
     1981 gtccacccgg ccgtagccct cgccgctgga gacgtaggtc caggcctcgc gcgccacccg
     2041 ggtgacggcg gtctcgaggt cctcgggcat ctccgcgggg cacaccggga gggtgccttc
     2101 gtcctcggcg cttcccggga tccacttggc ggcgtagctc acgatgggcc aggtgccctc
     2161 gggcatcccg tcgaaccgga tctcggcgat gggcagcatc cgcttcccca cgaagccgac
     2221 gttgaactcg cggccgggca cgtactcctg gaccagcacc tcctcgaact gctccagcat
     2281 gagcgcgacc cgcttcttga gggcccgctt ggaggtgcag acggcgccgt tgtcgatgcc
     2341 gacgctggcg tcttccgccg ccggcttgac gatggcgggg agcggaaact cggacggcgt
     2401 cttgttggcc tgggccagcg tgaaggccgg caccggaagg cccgcggccg agagcagggt
     2461 gttggccacg tgcttgcggt gggcgatggt ggtcgcccaa tgccggcagc cggtgaaggg
     2521 cacacccgcc agctccaggg tgccgaccac gtagtcctcg aaccgtgcgt ggccgttcac
     2581 cccctcgcag aggttgaaga ccagatcggc gcggcggacg cggttgagcc agcggaaatc
     2641 gcccatgcgc accggcagca gctcgacctc gtggccccgc cggcggagga cgtcgcgcac
     2701 ctcgtgcacg ttgcccacca ccgccgcgac gtcctgcggg ctccactcgt cgctgccggc
     2761 atcgtagagg atcgcaactc gcatcaggcc acctccgcca ggagtgaacg gccgctgatc
     2821 cgccgccagg cgatgtcggc gacggtgcgg atgaggtcgt cgtagctcat cccggcggca
     2881 cgagcggcct tggggaagca gctgttgtcc ctcgggtcgg gcaaaatgcc cggcagagga
     2941 ttcaactcga cgaccatcgg gcgaccggcg gcgtcgcaac gtacgtcgac gcggcaccag
     3001 tcacgacatt ccagggcgtg gtaggccgcc agcgcgacgg cccggacttg tccggccagc
     3061 tcctcgggga tgcgagcggg acagtcgaag atctccagcg gatgactcgg cgagtcccac
     3121 agccacttcg cctcgtatcc atagatgggc ggcgcaccct cgggcagtgt atcaaatcgc
     3181 atgcc
//
LOCUS       DASUYN010000489         2885 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1920442, whole genome shotgun sequence.
ACCESSION   DASUYN010000489 DASUYN010000000
VERSION     DASUYN010000489.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2885)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2885)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2885
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1920442"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..228)
                     /locus_tag="VF061_09510"
     CDS             complement(<1..228)
                     /locus_tag="VF061_09510"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX6669784.1"
                     /translation="MARGRSNVSTSDAFGQGKVSVIAAEGLHKVYGDLVAVQDLSFRV
                     DPGEVVGLVGPNGAGKTTTLHCLAGITIPTRG"
     gene            282..995
                     /locus_tag="VF061_09515"
     CDS             282..995
                     /locus_tag="VF061_09515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669785.1"
                     /translation="MRNYWLKILLGALGVFAVGMIGVTIVRSGIAKVNSVVEGSGPIT
                     IPLGLVPFVLSGERLGKLNHVTLYRESPRHVSGVELTVDLSDSLLAQGLSGCRLVANI
                     EGDDRQDGVNIRVGRDGVERSAFSCLPEDSTLADFAEYGEAVLNPGEVEIPLLLPLEV
                     INELQSLDFGHEAAAGDSLGEITVPNTDSIAAEVERQLDSAMLRRERGESRAAATMRF
                     ADSVRAEALKQIAEEADPQ"
     gene            1008..1625
                     /locus_tag="VF061_09520"
     CDS             1008..1625
                     /locus_tag="VF061_09520"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046820 - 4-amino-4-deoxychorismate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HEX6669786.1"
                     /translation="MLLVLDNYDSFTYNRVQYAGELGAEPVVYRNDALSVEAALELQP
                     AAIVVSPGPCTPREAGISVPLIRAAAGRVPILGVCLGHQAIGEAFGGRVVRADRLMHG
                     KTTPVAHRGHPLFHGIPTPFDAMRYHSLVVSPEDLPAELDIIAWSNDRAEGCEVMGLS
                     HDSLPVYGVQFHPESVGTAPGKRILANFLALVAGMTPPTGPGIRA"
     gene            1721..2464
                     /gene="kdsB"
                     /locus_tag="VF061_09525"
     CDS             1721..2464
                     /gene="kdsB"
                     /locus_tag="VF061_09525"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: protein motif:HMM:NF003952.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008690 - 3-deoxy-manno-octulosonate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HEX6669787.1"
                     /translation="MRVLGIIPARLGSTRLPNKPLQMLAGEPLITRVIQRVQEHGLVD
                     ELVVATDSPMVAQVVERARVRAVLTSRSHLTGTDRVAEVAAKPEFARFDTVVNVQGDE
                     PFLAREALAGAIERVAEGDDIGTAAAPLDPALAGDPARVKVVTDARGRALYFSRAAIP
                     HLRDPGDLTPSLYWQHLGLYAYAGEALRRWSALEPCPAELAERLEQLRALHHGLRIGV
                     ALLADPVEPGVDTPEDLRRAEAHWHALQR"
     gene            2469..>2885
                     /gene="pyrG"
                     /locus_tag="VF061_09530"
     CDS             2469..>2885
                     /gene="pyrG"
                     /locus_tag="VF061_09530"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683113.1"
                     /note="CTP synthase; cytidine triphosphate synthetase;
                     catalyzes the ATP-dependent amination of UTP to CTP with
                     either L-glutamine or ammonia as the source of nitrogen;
                     in Escherichia coli this enzyme forms a homotetramer;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthetase"
                     /protein_id="HEX6669788.1"
                     /translation="MNSGPKATKYIFVTGGVVSSLGKGIAAASLGRLLVERGLSVTMQ
                     KFDPYINVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERFTGVSARKSDNVTTGRIYS
                     TVIQRERRGDYLGATVQVIPHVTDAIKEFIRADVTDE"
BASE COUNT          455 a          983 c          978 g          469 t
ORIGIN      
        1 gccccgggtc ggaatggtga tcccggcgag gcagtgcagg gtggtggtct tccccgcgcc
       61 gttcggtccg accaggccca cgacctcccc ggggtctacc cggaaggaga ggtcctggac
      121 cgcgaccaga tcgccgtaca ccttgtgcaa gccctcggca gcgatcactg aaactttccc
      181 ttgcccgaag gcgtcactag ttgaaacatt agaccggccc cgggccatcg tggctctggg
      241 acgggctcga tactggggca cgggtcgccc ggagtgaagc tatgcgcaac tactggctca
      301 agatcctgct gggtgccctc ggcgtcttcg ccgtgggcat gatcggtgtc accatcgtcc
      361 gcagcggtat cgccaaggtg aacagtgtgg tcgagggctc cgggccgatc accatccccc
      421 tcgggctggt gcccttcgtc ctctccggtg agcgcctggg caagctgaac cacgtcacgt
      481 tgtaccggga gtccccgcgg cacgtcagcg gggtggagct gacggtggat ctgtccgatt
      541 cgctcctcgc gcagggactc tccggttgcc ggctggtcgc caacatcgag ggggacgacc
      601 ggcaggatgg cgtcaacatc cgcgtcgggc gcgacggggt ggagcggagt gcgttcagct
      661 gcctcccgga ggactcgacc ctcgcggact tcgccgagta tggcgaggcc gtcctcaacc
      721 ccggcgaggt ggagattccg ctcctgcttc cgttggaggt catcaacgag ctccagagcc
      781 tcgacttcgg tcacgaagcg gccgcgggcg attcgctggg cgagatcacg gtgcccaata
      841 ccgactcgat cgccgcggag gtcgagcgcc agctcgattc cgccatgctg cgtcgcgagc
      901 ggggagagtc gagggccgcg gccacgatgc gcttcgcgga ttcggtccgg gcggaagcgc
      961 tgaagcagat agcggaggag gccgacccgc aataaccttc ggggacgatg ctcctggtcc
     1021 tcgacaacta cgacagcttc acctacaacc gggttcagta cgccggcgag ctcggcgccg
     1081 agccggtagt ctaccggaac gatgccctga gcgtcgaggc cgcactcgag ctgcaaccgg
     1141 ccgcgatcgt ggtctcgcca ggtccctgca cgccccggga ggccggaatc tcggtaccac
     1201 tgatccgggc cgccgccggg cgggttccaa tccttggtgt ttgcctgggt catcaggcga
     1261 tcggcgaggc gttcggcggc cgggtcgtgc gcgcggaccg actcatgcac gggaagacca
     1321 ccccggtcgc ccaccgcggt cacccgctct tccatggcat tcctacgccg tttgacgcca
     1381 tgcggtatca ctccctcgtg gtctcacccg aggacctgcc ggcggagctg gacatcatcg
     1441 cctggtcgaa cgaccgagcg gaggggtgcg aggtcatggg gctgtcccac gactccctgc
     1501 cggtgtacgg cgtgcagttc catccggagt cggtggggac cgcgccaggg aagcggatcc
     1561 tggcgaactt tctggcgttg gtggcgggga tgacaccgcc gaccggcccc ggcattcgcg
     1621 cgtaactcat tttcccataa cagtatacga gcagagccaa aggccccccg ccgcgcggca
     1681 cgcgttttga ctccgtcccc gggcgctgtt agcttccgtg atgcgcgtcc tgggtatcat
     1741 tccggctcgt ctaggctcga cccgactccc caataaaccg ctccagatgc tggccggtga
     1801 accgctgatc acccgggtca tccagcgcgt ccaggagcac ggtctggtag acgagctggt
     1861 ggtggccacc gactcaccga tggtggccca ggtggtggag cgagcccggg tccgcgccgt
     1921 gctcaccagc aggagccatc tgaccggcac cgaccgggtc gccgaggtag cggcgaagcc
     1981 cgagttcgcc cggttcgaca cggtggtcaa cgtgcagggc gacgagccgt tcctggcgcg
     2041 cgaggcgctg gccggcgcca tcgagcgggt ggccgagggc gacgacatcg gcacggcggc
     2101 cgcgccactg gaccccgccc tagcagggga tccggcccgg gtgaaggtcg tcaccgacgc
     2161 gcggggcagg gcgctctact tctcgcgggc tgccatcccg cacttgcgcg accccggcga
     2221 cctcacgcct tcgctgtact ggcagcacct cggcctctac gcctatgccg gcgaggcgct
     2281 gcgccgctgg agtgcgctgg agccctgccc ggcggagctc gccgagcgcc tggagcagct
     2341 gcgggcgctg catcacggcc tccggatcgg cgtcgccctg ctggccgatc cggtcgagcc
     2401 gggcgtggac acacccgaag accttcgacg ggcggaagcc cattggcacg cactacagag
     2461 gtgaagctat gaattcgggt cccaaggcga ccaagtacat cttcgtcacc ggcggcgtcg
     2521 tctcttccct cgggaaaggc atcgccgccg cgtcgcttgg acggctgctc gtggagcgcg
     2581 ggctgagcgt cacgatgcag aagttcgatc cctatatcaa cgtggacccg ggcaccatgt
     2641 cgccgttcca gcacggcgag gtcttcgtga ccgacgacgg ggcggaaacc gacctcgacc
     2701 tcggccatta cgagcggttc accggcgtct ccgcgcgcaa gagcgacaac gtcaccaccg
     2761 ggcgcatcta ttccaccgtg atccagcgcg agcggcgcgg cgattacctg ggcgccacgg
     2821 tccaggtcat tccgcacgtc accgacgcga tcaaggagtt catccgcgcc gatgtcacgg
     2881 acgag
//
LOCUS       DASUYN010000490         2022 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1038794, whole genome shotgun sequence.
ACCESSION   DASUYN010000490 DASUYN010000000
VERSION     DASUYN010000490.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2022)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2022)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2022
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1038794"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..548)
                     /locus_tag="VF061_09535"
     CDS             complement(<1..548)
                     /locus_tag="VF061_09535"
                     /inference="COORDINATES: protein motif:HMM:NF012676.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/phosphoenolpyruvate mutase
                     family protein"
                     /protein_id="HEX6669789.1"
                     /translation="MGRLFAPPESEVPALKLRRLLHEARDKGTYLHTAGAYDAFTSAI
                     MTRLGFKALYGSGWQLAATKSMFPDIGVYASHDMVKLVHEMWMGIEGARNTHHYDTDG
                     KEVLEVPPAFVDMEAGFGGPTQTFTLAVELIRARAAGVHLENQDPANRTCGHIVNVGK
                     QKRNKVLVPRKDWLAKLKAIKAA"
     gene            740..1801
                     /locus_tag="VF061_09540"
     CDS             740..1801
                     /locus_tag="VF061_09540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX6669790.1"
                     /translation="MFITKPFIRDRRIRFALAGCGRISANHFDALEKHTERAELVGVC
                     DVDDGALERAVERTGAKGFRSLDAMLAGSEADVVILSTPSGIHADQAVQVAEAGRHVM
                     TEKPMATRWQDGKRMVHACDLAGVHLFVVKQNRRNATLQLVRRAIEKRRFGRIYMVNI
                     NVFWSRPQSYYDSAPWRGTWEFDGGAFMNQASHYVDLLDWLIGPVESVQAYTATLARN
                     IQVEDTGVVSIRWRTGALGSMNVTMLTYPKNLEGSITIIGEKGTVRVGGVAVNKIEHW
                     EFADRDPDDEEVEQASYQTTSVYGFGHPLYYDNVIKSLRGEATPDTDGREGLHSLEIL
                     IATYLSARDGRRVALPLEY"
BASE COUNT          347 a          668 c          683 g          324 t
ORIGIN      
        1 gcggccttga tcgccttgag cttggccagc cagtctttcc gaggcaccag gaccttgttc
       61 cgcttctgct ttccgacgtt gacgatatgg ccgcaggtgc gattggcagg atcctggttc
      121 tccaggtgca ctcccgccgc ccgcgccctg atcagctcga cggcgagcgt gaatgtctgg
      181 gtggggcctc cgaagccggc ctccatgtcg acgaacgccg gcggaacctc gagcacttcc
      241 ttaccatcag tgtcgtagtg gtgagtgttc cgggcaccct cgatccccat ccacatctca
      301 tgaaccagct ttaccatatc gtgcgaggca tagaccccga tgtcggggaa catgctcttg
      361 gtggcggcca gctgccagcc gcttccgtac agcgccttga acccgagccg ggtcatgatg
      421 gccgacgtga acgcgtcgta ggcgccggcg gtgtggaggt aggtaccctt gtcccgcgct
      481 tcgtgcagca ggcgccgcag cttgagcgcc gggacctcgc tctccggcgg cgcgaagagc
      541 cggcccacgg cctcggcggg ataggcagca ttgggggaca ccggtcgggt cgcagtcgcc
      601 atgagagctc tcctcaagat tgtgaaacta ttcacaagat agtgaaaaat ggctgaacgc
      661 gccagagagg tccggggcca gctgggacgg ccgccgcacc atacccccaa ctcctagcca
      721 gatgtacctt tagcgaccca tgttcatcac caagcccttc atccgggacc gcaggatccg
      781 gttcgccctg gcaggctgcg ggcgcatttc ggccaaccac ttcgacgccc tggagaagca
      841 caccgagcgg gcggagctgg tcggggtgtg cgacgtggac gacggggcgc tggagcgggc
      901 ggtcgagcga accggtgcca agggcttcag gtcgctggac gccatgctcg ccggcagcga
      961 ggcggacgtg gtgatcctct cgacgccgag cgggatccac gccgaccagg cggtgcaggt
     1021 ggcggaggcc gggcggcacg tgatgaccga gaaaccgatg gccacgcgct ggcaggacgg
     1081 caagcgcatg gtgcacgcct gcgacctcgc cggcgtccat ctcttcgtgg tcaagcagaa
     1141 ccggcgaaac gccaccctcc aactggtgcg gcgggccatc gagaagcggc gcttcggccg
     1201 gatctacatg gtgaacatca acgtgttctg gagccggccc cagtcctact acgacagcgc
     1261 gccgtggcgg ggcacctggg agttcgacgg cggcgccttc atgaaccagg cgagccacta
     1321 cgtggacctg ctcgactggc tcatcgggcc ggtggagagc gtccaggcct acaccgcgac
     1381 cctcgcccgc aacatccagg tggaggacac cggtgtggtc agcatccgct ggcgcaccgg
     1441 cgcgctgggc tcgatgaacg tgacgatgct gacctatccc aagaacctcg agggctcgat
     1501 caccatcatc ggggagaagg gcacggtgcg ggtcggtggg gtggcggtga acaagatcga
     1561 gcactgggag ttcgccgacc gggatccgga cgacgaggag gtggagcagg cgagctacca
     1621 gaccacctcg gtctacggct tcggccaccc gctgtactac gacaacgtga tcaagtcgct
     1681 gcggggcgag gccacccccg acaccgacgg gcgcgaggga ctccactcgc tcgagatcct
     1741 gatcgccacc tacctctccg cacgggatgg gcgcagggtc gcgctgcccc tggagtacta
     1801 gcgccgggag gacccccggt gccggcgccg gcatggtctc cgcttccctc caggattgcc
     1861 tgcttcgagt gatcgtcaag gcgggcgacc gaacgcgcct ccggccgggc cgcgcgttgt
     1921 gccccgccct cgccggcccc gacggggcgg aaacccaagg agtctgcatc gatgccgttt
     1981 gcgggaaagt ccgtgctcat caccgggggt accggctcgt tc
//
LOCUS       DASUYN010000491         2265 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1480109, whole genome shotgun sequence.
ACCESSION   DASUYN010000491 DASUYN010000000
VERSION     DASUYN010000491.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2265)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2265)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2265
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1480109"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..853)
                     /locus_tag="VF061_09545"
     CDS             complement(<1..853)
                     /locus_tag="VF061_09545"
                     /inference="COORDINATES: protein motif:HMM:NF013799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ectonucleotide
                     pyrophosphatase/phosphodiesterase"
                     /protein_id="HEX6669791.1"
                     /translation="MRSSGWSAVPRWVLAAAVLVTACSARTGAAPRGDGGRGATVLLV
                     SIDGFRWDYLDRGLTPNLSRLAREGVRAEALVPVFPTKTYPNHYTIVTGRYPANHGIV
                     GNVLTAPDIGRRLSLWDREAVRDAGFYLAEPIWVTAERQGRPTAPLFWPGSEARINGV
                     RPTYALPYDGTMADTARIAWILERLQLPPERRPVFLTLYFNVVDNAGHDYGPDAPETD
                     AAIARADTLVGLVDGGLARIGRRDVNLVVVSDHGMTSTGPDRVLWLDEYVAPDAMVVD
                     EMSTLLTA"
     gene            852..2102
                     /gene="rmuC"
                     /locus_tag="VF061_09550"
     CDS             852..2102
                     /gene="rmuC"
                     /locus_tag="VF061_09550"
                     /inference="COORDINATES: protein motif:HMM:NF014680.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HEX6669792.1"
                     /translation="MDTVSFLFGAALGLAIGALVAWLASRVATARILARLEAERQGSA
                     EKLALLAQAETRLREAFGALSAEALRQNNRSFLELAEAKLGEAQRSAASELELRRRAV
                     DDLVRPITAALERVDGKIREVEKERAASHAGLIEQLKAMGRAQQALQAEAGNLSRALR
                     APQVRGRWGEIQLRRVVELAGMLDYCDFEEQVTATLEGSSLRPDLVVRLPGGKTVVVD
                     AKAPMAAYLDAMDGPGDDAAREGLLRDHARQVRDHMSALGSKAYWSQFQPAPDFVVMF
                     LPGETFFSAACRHDPALIEFGVSQQVIPASPTTLIALLRAIAYGWRQERIAQNAQEIS
                     DLGRQLHERVGTMAGHFDDLRRALDRAVESYNRTVGSLETRVLATARRFRELGVTGDE
                     LPEGMAIEQTTRGLMAPELTPPAS"
BASE COUNT          339 a          802 c          821 g          303 t
ORIGIN      
        1 atgcggtgag cagcgtcgac atctcgtcca ccaccatcgc gtccggtgcg acgtactcat
       61 ccagccagag tacccggtcc ggcccggtag aggtcatccc gtggtcggag actacgacca
      121 ggttcacgtc gcgccggccg atccgggcga gccccccgtc caccagtccg accagcgtgt
      181 ccgcccgggc gatcgccgca tccgtctcgg gagcgtcggg cccgtagtcg tgcccggcgt
      241 tgtccaccac gttgaagtag agcgtgagga agaccggccg ccgctccgga ggcaactgga
      301 gtcgctccag gatccaggcg atccgcgcgg tgtcggccat cgtcccgtcg tacggcaaag
      361 cgtaggtggg ccgcaccccg ttgatccgag cctcgctccc cggccagaat agaggcgccg
      421 tcggacgccc ctgccgctcc gccgtcaccc agatcggctc ggccaggtag aagccggcgt
      481 cccggacggc ctcgcggtcc cacaggctca gtcggcggcc gatgtcaggg gccgtgagta
      541 cattgcccac gatcccgtgg ttggccgggt agcgcccggt gacgatggtg tagtgattgg
      601 gataggtctt ggtggggaac accggcacca acgcctcggc gcgcaccccc tcgcgcgcga
      661 ggcgcgacag gttgggcgtg agcccgcgat cgagatagtc ccaccggaag ccgtcgatcg
      721 acaccagcag gaccgtcgcg ccgcgtccac cgtcgccacg cggcgccgcg ccggttctcg
      781 ccgagcaggc cgtcaccagg accgcggcgg cgaggaccca ccgtgggacc gcactccagc
      841 ccgaggaccg catggacacc gtttcctttc tcttcggggc cgccctcggc ctcgccatcg
      901 gcgcgctggt cgcctggctc gcgtcgcggg tagccaccgc ccgcattctc gcccgactcg
      961 aggccgagcg gcaggggtcc gcggagaagc tggcgctgct ggcccaggcc gagacccggc
     1021 tccgggaggc cttcggcgcg ctctcggcgg aggccctgcg gcagaacaac cggtccttcc
     1081 tcgagctggc cgaggcgaag ctgggagagg cacagcggtc ggccgcctcg gagctggagc
     1141 tgcgccggcg ggcggtggac gacctggtcc ggccgatcac ggccgcgctc gaacgggtgg
     1201 acgggaagat ccgggaggtg gagaaggagc gcgccgcctc ccacgccggg ctgatcgagc
     1261 agctcaaggc gatggggcgg gcccagcagg ccctgcaggc ggaagcgggg aacctgtccc
     1321 gggccctccg cgcgccgcag gtgcgggggc gctggggcga gatccagctg cgtagggtcg
     1381 tcgagctggc ggggatgctc gactactgcg acttcgagga gcaggtgacg gccacgctgg
     1441 aggggtcgtc gcttcggccc gatctggtgg ttcggctgcc gggtggaaag accgtggtgg
     1501 tggacgccaa ggcacccatg gccgcgtacc tcgacgcgat ggacggcccc ggagacgacg
     1561 cggccaggga aggcctgctc cgcgaccacg cccgccaggt gcgcgaccac atgagcgcgc
     1621 tcgggagcaa ggcctactgg agccagttcc agcccgcccc cgacttcgtg gtgatgtttc
     1681 tgccggggga gaccttcttc agcgccgcct gccggcacga tcccgcgctc atcgagttcg
     1741 gagtgagcca gcaggtgatc cccgcgagtc cgaccacgct gatcgccctc ctccgcgcca
     1801 tcgcctacgg ctggcgccag gagcggatcg cgcagaacgc gcaggagatc agtgatctgg
     1861 gccggcagct ccacgaacgg gtgggaacca tggccgggca tttcgacgac ctccgccgtg
     1921 ccctcgaccg ggcggtggag agctacaacc ggaccgtcgg gtcgctggag accagagtgc
     1981 tcgcgaccgc gcgccgcttc cgggagctgg gcgtgaccgg cgacgagctg ccggagggga
     2041 tggccatcga gcagacgacg aggggactga tggccccgga gctgacgccg cccgcgtcgt
     2101 gaggggaggc gcggccgcca cgggcggcag cccgacgcca gccgaggaac ccgaacccga
     2161 ctcaccccgt agtgcgggga taaccccagc atcccggagc cctcgcatgt cccgttcgtt
     2221 cgtcatggga accctggccg gcattgtcct cgcgctcccc gcagg
//
LOCUS       DASUYN010000492         5069 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_377753, whole genome shotgun sequence.
ACCESSION   DASUYN010000492 DASUYN010000000
VERSION     DASUYN010000492.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5069)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5069)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5069
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_377753"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1101)
                     /locus_tag="VF061_09555"
     CDS             complement(<1..1101)
                     /locus_tag="VF061_09555"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX6669793.1"
                     /translation="MDERQQILAQGLSGRYAIERELGRGGMATVWLARDLRYDRMVAL
                     KVLRPELAASLGAQRFLREIMLAARLQHPHIVPVYDSGEIPLPGGERPPILWFTMPWI
                     DGESLRERLRREGRLAPAAAIGVARAVARGLQYAHEQGVVHRDVKPENILLTRDGSTM
                     VADFGVARPTQTAVTENLTGTGIVIGTPVYMSPEQATGGELDGRADVYSLGCVLYEML
                     TGEPPFVGGTAQEIVVRHLTERPLLSGPGHPAISPALKAALSRALAKAREDRPASAAA
                     FADSLGDGDGSAGTAPNRRTTVVLGALAAAAGLATFLALRHPASEATALRSGGGAGTV
                     ASGFSRRLTQLTSREGLEEWPTWSPDGQQLAYV"
     gene            complement(1176..2177)
                     /locus_tag="VF061_09560"
     CDS             complement(1176..2177)
                     /locus_tag="VF061_09560"
                     /inference="COORDINATES: protein motif:HMM:NF005495.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX6669794.1"
                     /translation="MRPKLTRLRQQVVVITGGSSGIGLATARLAGERGAQVVLVSRDD
                     EDLGRAVREIRERGGRATHFVADVADHAALQRVARDVVVEFGRIDTWVNNAGVTVYGL
                     TEEIPLGDARRLFETNYWGVVNGSLAALPHLRTGGGALINIGSVLSDTGYPLQGHYTA
                     SKHAVKGFTDSLRLEVEKSGAAVSVTLIQPAAIDTPYTDHARNHLGVQARQMPPVYAP
                     EVVAKAILRCAEKPERNVLVGGSGKLFSTGEKFVPRLFDLMKEATGFDGQRTDTPARD
                     ENTLFHPRPHDGRVRGSYPGRVMVSSAYTEARLHRGRTLLGLAVLGAGLLVANRGRS"
     gene            complement(2268..2447)
                     /locus_tag="VF061_09565"
     CDS             complement(2268..2447)
                     /locus_tag="VF061_09565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669795.1"
                     /translation="MVTVLTCDYNGWNDAPEDEREWFDEHPEERSPSVRDADLRPHRA
                     TPRPIVRRFRGGMAA"
     gene            2569..5046
                     /gene="hrpB"
                     /locus_tag="VF061_09570"
     CDS             2569..5046
                     /gene="hrpB"
                     /locus_tag="VF061_09570"
                     /inference="COORDINATES: protein motif:HMM:TIGR01970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase HrpB"
                     /protein_id="HEX6669796.1"
                     /translation="MRHTARLPIEQVLPRLRHVLRSGTGAVLQAPPGAGKTTRVPLAL
                     LDEPWLEGRGIVMLEPRRLAARAAARRMSLLLGERPGGTVGYRVRHESVVGPATRVEV
                     VTEGVLTRMLQGDPALERFGLVVFDEFHERSIHADLGLALSLQSRSLLREDLRILVMS
                     ATLEGGPVAALLGGVPVVTSEGRTYPVEVRHLPRRPGGRLESQVAAVVGEALEAEQGD
                     VLVFLPGAREIRRTASLLRGVPADVLVLHGNLSPEDQDRALLPSADGRRKVVLATSIA
                     ETSLTIEGVRIVVDCGLSRVPRYSPRTGMTRLATVRVSAASADQRRGRAGRLAPGVCY
                     RLWSLQEHAALPARSTPEILEADLAPLALDLAAAGVPDPSELRWLDPPPGAALAEARS
                     LLAQLGALDAAGLTRHGAAMARLALHPRLSHMVMKATELHDREAACEVAALLTERDLL
                     RRTEVVPEADIRTRLDFLRGTVARSDVDREALRRARAEVAACRRAGRGRTPDGSGGSI
                     GRLLALAYPDRVAQRRPGAIGRFLLRNGLGAFLDPQGLSAEDYIVACELDGRAPESRI
                     LLAGPIGIEEIRKLFQGDIEVEDVVAWDGEARAVVARRRERLGAIVLRETPLTRPDPV
                     RVGEALLQGVRAVGVEALPWSDGARRLRERITFIRTLHPQWPDVSDAALAESLEGWLG
                     TRALGLSKLADLGGVDLMSALLDLLTWEQRAALDRLAPTHLMVPSGSRVPVDYDDPYR
                     PVLAVRLQEMFGLTETPRVGGGAVPVILHLLSPAGRPVQVTRDLAGFWRTTYFDVRKD
                     LKGRYPKHHWPDDPLAAQPTGRAKRRS"
BASE COUNT          714 a         1779 c         1805 g          771 t
ORIGIN      
        1 gacgtaggcg agctgctggc cgtcgggcga ccaggtgggc cactcctcca gtccttcccg
       61 cgaagtgagc tgggtcagcc ggcgggagaa cccggaggcc accgtgcctg ctccgccacc
      121 gctccgcaga gcggtcgctt cgctcgccgg atggcggagg gcgaggaacg tcgccaggcc
      181 tgccgccgcg gcgagcgcac ccagcaccac cgtggtgcgg cgattcggcg cggtccccgc
      241 actcccatct ccgtcgccca gggaatccgc gaacgccgcg gcggatgccg gccggtcctc
      301 ccgagccttg gccagggcac gcgagagcgc ggccttgagt gcgggcgaga tcgccgggtg
      361 ccccggtccg gacagcagcg gccgctcggt caagtgcctg acgacgatct cctgcgcggt
      421 accaccgacg aacggcggct cgcccgtcaa catctcgtag aggacgcagc ccagagagta
      481 gacgtccgcc cgcccatcca gctcgccgcc ggtggcctgc tccggactca tgtacaccgg
      541 cgtgccgatc acgatgccgg tcccggtgag attctccgtc acggccgtct gagtgggtcg
      601 ggcgacgccg aagtccgcca ccatggtgct gccgtcgcgg gtgagcagga tgttctccgg
      661 cttcacgtca cgatggacga cgccctgctc gtgcgcgtac tggagtcccc gcgccaccgc
      721 tcgcgcgacc ccgatcgccg ccgccggcgc cagacgaccc tcccgacgaa gtcgctcgcg
      781 cagcgattcc ccgtcgatcc agggcatggt gaaccacagg atcggcgggc gctcgccgcc
      841 cgggaggggg atctcgcccg agtcgtacac cggcacgatg tgcggatgct gcagtcgggc
      901 cgcgagcatg atctcgcgga ggaagcgctg tgctccgagg gaagccgcga gctccgggcg
      961 gaggaccttg agcgccacca tccggtcgta acggaggtcg cgcgccagcc agacggtagc
     1021 catgccacca cgcccgagct cgcgctcgat cgcgtagcgg ccgctcaggc cctgggcgag
     1081 aatctgctgg cgctcatcca ttggggatag ccgaagagag atcctgcagg gcaatatggc
     1141 ggcatggtgc cagccggcgg aggcccctct tcgcgctaac tgcgtccccg attggcgacc
     1201 aggagcccgg ctccgagcac cgccagcccg agcagggtcc tgccgcggtg gagcctggcc
     1261 tcggtgtagg cgctggagac catcacccgg ccggggtagc taccgcggac ccggccgtcg
     1321 tgcggccggg gatgaaagag ggtgttctcg tcccgcgccg gcgtgtcggt ccgctggccg
     1381 tcgaaaccgg tggcctcctt catcagatcg aacaatcgcg ggacgaactt ctcgcccgtc
     1441 gagaagagct tcccgctgcc ccccaccagc acgttccgct ccggcttctc cgcacagcgg
     1501 agaatcgcct tcgcgaccac ttcaggagca tagaccggcg gcatctgcct ggcctgaacc
     1561 cccagatggt tccgcgcgtg gtccgtatag ggcgtgtcga tggcggccgg ctggatcagg
     1621 gtcacggata ccgcggcgcc gctcttctcg acctccagcc gcagcgaatc ggtgaacccc
     1681 ttcaccgcgt gcttgcttgc cgtgtaatgc ccctggagcg ggtagcccgt gtccgaaagg
     1741 acgctcccga tgttgatgag cgcgccccct ccggtccgga gatgggggag ggcggccagg
     1801 ctgccgttca ccacgcccca atagttggtc tcgaacagcc gccgcgcgtc cccgaggggg
     1861 atctcctcgg tcaggccgta gaccgtgacg ccggcattgt tgacccaggt gtcgatccgg
     1921 ccgaactcga cgaccacatc gcgggccacg cgctggagcg ccgcgtgatc ggccacgtcc
     1981 gccacgaaat gggtggcccg gccgccccgc tcgcggatct cccgtacggc ccgccccagg
     2041 tcttcgtcgt cccgcgaaac cagcaccacc tgcgcgccgc gctcgcccgc cagcctcgcg
     2101 gtggcgaggc cgatcccgct cgagccgccg gtgatgacga ccacctgctg gcgcagccgc
     2161 gtcagcttgg gtctcatgat tgactccggc aatgaaggct ctgtccgcgg atcgagatcc
     2221 gccgagccca cgttatcgcc gggcggagga aggaagcgtg gtgtggatca cgcggccatg
     2281 ccgccgcgaa agcgtctcac gatggggcga ggtgtcgctc gatggggacg gaggtccgca
     2341 tcgcgaaccg aggggctccg ctcttcggga tgctcgtcga accactcgcg ctcgtcctcg
     2401 ggcgcgtcgt tccagccgtt atagtcgcag gtgagcacgg tcaccacctt ccctcattga
     2461 actcgccgct cacgggcgag cggccggacg gacgcagtcg cacagggcgt gccatcctct
     2521 cctcacaacg cccccggctc gggagaggtt ccgagctatc cttgggtcat gcgtcacaca
     2581 gcgcgcttgc cgatcgagca ggtgctgcct cgcctgcgcc atgtgctccg gagtggcacc
     2641 ggggccgtgc tccaggcgcc gccaggagcg ggcaagacca cccgggtgcc tctcgcgctg
     2701 ctggacgagc cctggctcga gggacgcggg atcgtcatgc tcgagccacg ccgtctggct
     2761 gcccgggccg cggcgcgacg gatgtccctg ctcctggggg agcggcccgg tggaaccgtg
     2821 ggttaccggg tgcgccacga gtccgtcgtc ggcccggcca ccagagtcga ggtggtgacc
     2881 gaaggggtgc tcacccggat gttgcagggc gacccagccc tggagcgatt cgggctggtg
     2941 gtcttcgacg agtttcacga gcggagcatc catgccgacc tcggtctcgc gctgagtctg
     3001 cagtctcgct ccctattgcg cgaagacctg cgcattctgg tcatgtcggc cacgctcgag
     3061 ggcggtcccg tggccgcgct tctgggcggc gtaccggtcg tgacgagcga aggacgcacc
     3121 tatccggtcg aagttcggca cctccctcgg cgtcccggcg gaaggctcga gtcccaggtc
     3181 gccgcggtcg tgggagaggc gctcgaggcg gaacaggggg atgtgctggt ctttctcccc
     3241 ggcgccaggg agatccgccg cacagcctcg ctccttcggg gggtgcccgc cgacgtcctg
     3301 gtcttgcacg gcaacctctc tcccgaggac caggatcgcg ccctcctccc gagcgcggac
     3361 ggcaggcgga aggtggtgct cgccacgtcc atcgcggaga ccagcctcac gattgaaggc
     3421 gtccggatcg tggtggactg cggcctctcc cgggtacccc gctactcacc gcggaccggg
     3481 atgacccggc tggccaccgt cagggtctcc gcggcctcgg cggaccagcg gcgggggcgt
     3541 gccggccgcc tcgcccccgg cgtgtgttac cggctgtggt cgctgcagga gcacgccgcc
     3601 cttccggcgc gttccacgcc tgagatcctg gaagccgacc tggcgccgct cgccctcgat
     3661 ctggccgcgg ccggcgtacc cgatccatcg gagcttcgct ggctcgaccc gcctcccgga
     3721 gccgcattgg cggaggcacg gagcctgctc gctcagctcg gcgcgctgga cgccgcgggc
     3781 ctcacccgcc acggcgcggc catggcgcgc ctcgcgctcc accctcggct ctcccacatg
     3841 gtgatgaaag ccacggagtt gcacgacagg gaggcggcct gtgaggtggc tgcgctgtta
     3901 acggagcggg acctgctgcg tcgaaccgag gtcgtccccg aggcggacat ccggacgcgc
     3961 ctcgatttcc tccgggggac agtggcgcgg tccgacgtgg accgggaggc gctgcggcgc
     4021 gcgcgggccg aggtggcggc gtgccggcgg gcaggacgcg ggcggacgcc cgacggcagc
     4081 gggggaagta tcgggcggct tctcgctctg gcctaccccg atcgtgtcgc ccagcggcgc
     4141 cccggcgcca tcggacggtt tctcctccgt aatggcctcg gtgcgttcct cgatccgcag
     4201 ggactctcgg cggaggatta catcgtcgcg tgcgagctcg atggccgggc ccccgagagc
     4261 cggatcctgc tggccgggcc gatcggaatc gaagagatcc ggaagctgtt ccagggcgat
     4321 atcgaagtcg aggacgtggt cgcctgggac ggcgaggcga gggctgtggt ggcgaggcgg
     4381 agggagcggc tgggggcaat cgtgctccgg gaaacccccc tcacccggcc cgatcccgtg
     4441 agggtggggg aggcgctgct ccagggcgtg cgagcggtgg gagtcgaggc acttccctgg
     4501 agtgacggtg caaggcggct gcgtgagcgc atcaccttca tccggaccct ccatccccag
     4561 tggccggacg tctccgatgc cgccctcgcg gaatccctgg agggttggct cgggacccgc
     4621 gcgctcggct tgtcgaagtt ggccgacctc ggtggggtcg acctcatgtc ggccctgctg
     4681 gacctgctga cctgggagca gcgggcggcg ctggaccggc tggcacctac ccatctgatg
     4741 gtgccgagtg gatccagggt gccggtggac tacgacgacc cgtaccggcc ggtgttggcg
     4801 gtccgcctcc aggagatgtt cgggctgacg gagacccccc gggtcggcgg gggagcggtg
     4861 ccggtgatcc tgcacctcct gtccccagcg ggccggccgg tgcaggtgac gcgggacctc
     4921 gcgggattct ggcgaacgac gtatttcgat gtgcggaaag acctcaaggg ccgttacccg
     4981 aaacaccact ggcccgacga ccctttggcg gcgcagccga ccggtcgggc gaaacggagg
     5041 tcctgagggg aaccccgagg ggacgtcgg
//
LOCUS       DASUYN010000493         4967 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1039172, whole genome shotgun sequence.
ACCESSION   DASUYN010000493 DASUYN010000000
VERSION     DASUYN010000493.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4967)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4967)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4967
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1039172"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1152
                     /locus_tag="VF061_09575"
     CDS             <1..1152
                     /locus_tag="VF061_09575"
                     /inference="COORDINATES: protein motif:HMM:NF016260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HEX6669797.1"
                     /translation="GERFRLDTLRLATGDDEDLLATGGVILEPLADPTFAVDARLRDF
                     LVSDSDQLRAVATGEVRLSGTAARPELTGKLQLNEGEIMTGGATAAVVEEVELTPADL
                     QQLAQRFGPAALAEAEEGLAFLDRFRMNLDLAFPRRVWFRKAESPSIDIELSGRINLR
                     QEPGQDMEFFGQVEPIPGRGELNLYGRSFELTEGEIALRGPVEAVVLDVTAQYRVPTQ
                     GDPDDEDVVINVRATGRPDSLDLDFEAEPSMPQEDIVSYIVTGRPASDNPLVDQAGGG
                     VNAGQVAINELAGNLGGAAGEELGFDVFTIRQEPEQGLTLTAGRYLASRLFVSLQQPL
                     RIGGTTDQQTTAASGPGFELEYAWRRWLRSTLRGGSLPTSLLMRGRRAY"
     gene            1142..3289
                     /locus_tag="VF061_09580"
     CDS             1142..3289
                     /locus_tag="VF061_09580"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HEX6669798.1"
                     /translation="MRTERAVATGMALLLVGVPLAAQDALSGVGAGTQVSSIEFRFTG
                     GETLGERDLRPHIALTERGGLVGLRRAFGWLPLVGPVGDHPFSPAELQRDVVRLRNIY
                     IRYGFLDAKVDYDVRYDAEDDLVDVAFLIEQGPPIELREVRFIAPDSGPPAIAPDLED
                     QWNRFMQAERQVGGRFGEGERRGIAERTTRWLRNRGYPFGAAEADVLVDTAAYRADVV
                     VRVRSGLRARVREIAVSGNETVPASHLSRQLPLEPGDWYDAAKLENGRAQVAQLSIVR
                     LALVHVPRGSADDSSVVVSLGVTENPPRQVSGEAGLVSNGGLTGQVEWSHRSFLGGVR
                     TFSVAATAQTGVVALETPAEQRYRLALTLFQPYVGDRRLSLAGGPFVEYRDDLRDRSQ
                     AVGFEGTLVYATSPLRSISLGYTISHRKILDYGFGDDLDPVEYLPLLGLADSATVGSL
                     GTIFNRSTLTLDGSWGVLDEFANPRRGYVVRPRASVTLPGFNTSEYLLLDVGATSFLP
                     LTDRIGFTVRGSAGRIFPFGRSVREAGSESPFVSLLRLREVTFSAGGSRDVRGWGSQL
                     VGPKLPQVRFREEAGERIAFAERYSPVGGLARLHGSAEVQMPLPGFDEKWQTFAFLDG
                     ARIWTPDDRFDLDAGELEQDRFFLGTGVGIGYETVVGAVQVALGYKLNPSALDVRDPD
                     EVLEVLEAGQPLSSVPEDSRRRFQLHFSIGATF"
     gene            complement(3222..>4967)
                     /locus_tag="VF061_09585"
     CDS             complement(3222..>4967)
                     /locus_tag="VF061_09585"
                     /inference="COORDINATES: protein motif:HMM:NF014017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03915 family putative DNA repair protein"
                     /protein_id="HEX6669799.1"
                     /translation="GAIAPQVSARFLRLAAMVACHRASDRWDLLYRVLWRHTGGERHL
                     LALATDPQVRRLFEMARAVKRSAHKMKAFVRFRAVRATSETDPAYVAWFEPTHLVVEA
                     TAPFFARRFRAMRWSILTPERCAHWDRRELRFTPGAARASAPTGDELEELWRAYYAGA
                     FNPARLNPGAMRAEMPKRYWRNLPESRLIAELSREAPRRTAEMLARGLGPAEPLPEDL
                     EAVETRCPADPPGWDRIHDPGLHHARHRMDLAGFGAPLGLSMLDRTRVLVGVAGWTDP
                     TLTTGNVFYPRGVESAEDRLRFYASRYPVVEVDATYYSLPTRGMAAEWARRTPDHFVF
                     DLKAHGLMTGHGADVRRLPDWLRRDLPSRATAGAPLYGRDLPPALMDEVWRRFLGALE
                     PLRAAGKLGSILFQFPRWFQPSRASAAVLADVRRRLGSDQGAVELRSHSWMRGRVGER
                     TLGLLADLDLTYVVVDGPQGLASSMPPRVAVTSPRLAIMRLHGRRVETWERRNDPATE
                     RYRYLYDEAELEEHLRRILELSAQKARALHIIYNNCHGNYAVTNAAELTCRLRTSLRS
                     RSAAGTAAASLPAPS"
BASE COUNT          707 a         1703 c         1829 g          728 t
ORIGIN      
        1 ggcgagcggt tccgcctcga taccctgcgt ctcgctaccg gcgacgacga ggacctgctc
       61 gccaccggag gggtcatcct cgagccgctg gccgatccca ccttcgcggt ggatgccagg
      121 ctccgggact tcctggtctc cgactcggat cagctccggg ccgtggcgac cggcgaggtg
      181 cggctctcgg gcaccgccgc cagaccggag ctcaccggca agctgcagct gaatgagggc
      241 gagatcatga ccggcggtgc caccgcggcc gtggtggagg aggtggagct gaccccggcc
      301 gatctccagc agctcgcgca gcgcttcggc cccgccgcgc tcgccgaggc ggaggagggt
      361 ctcgcgttcc tggatcggtt ccgcatgaac ctcgacctcg cctttccgcg gcgggtgtgg
      421 ttccggaagg cggagagtcc cagcatcgac atcgagctct ccggccggat caacctgcgg
      481 caggagcccg gtcaggacat ggaattcttc ggtcaggtgg agccgatccc cgggcgcggg
      541 gagctcaacc tgtacgggcg gtcgttcgag ctgaccgagg gggagatcgc gctgcgcggg
      601 ccggtcgagg cggtcgtact cgatgtgacc gcgcagtacc gcgtgcccac ccagggcgat
      661 cccgacgacg aggacgtggt catcaacgtt cgggccaccg gccggcccga cagtctcgac
      721 ctcgatttcg aggccgagcc gagcatgccg caggaagaca tcgtctccta catcgtgacc
      781 ggcaggcccg cgtcggacaa tccgctcgtg gatcaggcgg gcgggggagt gaacgccggc
      841 caggtcgcga tcaacgagct cgccgggaac ctcggcggcg ccgccggcga agagctggga
      901 ttcgatgtgt tcaccatccg ccaggagccg gaacaggggc tcaccctgac ggcgggtcgg
      961 tacctcgcgt cgcggctgtt cgtcagtctc cagcagccgc tccggatcgg cggcacgacc
     1021 gaccagcaga ccacggcggc gagcggcccc ggcttcgagc tggagtacgc ctggcgacgc
     1081 tggctgcgga gcaccctccg gggcggcagc ctgcccacca gcctgctgat gcggggtcgc
     1141 cgtgcgtact gagcgcgcgg tggccaccgg catggcgctc ctgctggtcg gggtgccgct
     1201 ggcggcgcag gacgccctga gcggggtggg cgccggcacc caggtgagca gcatcgagtt
     1261 ccgcttcacc gggggggaga cgctggggga gcgggatctc cggccccaca tcgcgctcac
     1321 cgagcggggc ggcctggtgg ggctgcggcg cgcgttcggg tggctcccgc tggtgggtcc
     1381 ggtcggcgac cacccgttca gtccggccga gcttcagcgc gacgtcgtac ggctcaggaa
     1441 catctacatc cgctacggct tcctggacgc gaaggtggac tacgacgtcc gctacgacgc
     1501 ggaggacgac ctggtggacg tggccttcct gatcgagcag gggccgccga tcgagctgcg
     1561 ggaggtgcgg ttcatcgctc cggacagcgg gccgccggcc atcgccccgg acctggaaga
     1621 ccagtggaat cggttcatgc aggccgagcg gcaggtgggc ggccgcttcg gcgaggggga
     1681 gcggcgcggc atcgccgagc gcaccacgcg ctggctccgg aaccgcggct accctttcgg
     1741 cgcggccgag gccgacgtgc tggtggacac ggccgcctac cgggccgatg tggtggtccg
     1801 ggtacgctcc gggcttcgcg ccagggttcg cgagatcgcg gtcagcggaa acgagaccgt
     1861 accggcgagc cacctgtccc gccagcttcc gctcgagccg ggggactggt acgacgccgc
     1921 caagctggag aacggacggg cccaggtggc ccagctctcg atcgtgcggc tggcgctggt
     1981 tcacgtgcct cggggcagcg cggacgactc cagcgtggtg gtgagcctcg gcgtgaccga
     2041 gaatccgccc cggcaggtca gcggagaggc cggcctggtc tcgaacggcg gtctcacggg
     2101 ccaggtcgag tggagccatc ggagcttcct gggcggcgtg cgcacgttct cggtggcggc
     2161 gacggcgcag accggtgtcg tcgcgctgga gacgcctgcg gagcagcgct accgcctggc
     2221 cctcacgctg ttccagccct acgtgggcga ccggcggctc tcgctggccg gaggaccgtt
     2281 cgtcgagtac cgcgatgacc tgcgcgaccg gtcgcaggcg gtgggcttcg aaggcactct
     2341 ggtgtacgcg accagtcccc tgcggtccat ttcgcttggc tacaccatct cccaccggaa
     2401 gatcctcgac tacgggttcg gcgacgacct cgacccggtc gagtacctgc cgctgctcgg
     2461 cctcgccgat tcggcgaccg tcggctcgct gggcacgatc ttcaaccgca gcacgctgac
     2521 cctcgacggc agctggggcg tgctcgacga gttcgccaac ccgcggcggg gctacgtggt
     2581 ccggccccgc gcctcggtga cgctgccggg attcaacacc agcgagtacc tcctcctgga
     2641 tgtcggggcc accagcttcc tcccgctcac cgaccggatc ggcttcaccg tgcgcgggag
     2701 cgcggggcgg atctttccgt tcgggcgaag cgtgcgggag gcggggagcg aatcgccctt
     2761 cgtctcgctg ctccgactgc gcgaggtgac cttcagcgcc ggcgggtccc gcgacgtacg
     2821 cggctggggc agccagctgg tcgggcccaa gctcccgcag gtgcgcttcc gggaggaggc
     2881 gggcgagcgg atcgccttcg cggagcggta ctcccccgtc ggggggctcg ctcggctgca
     2941 cggcagcgcg gaggtccaga tgccgctgcc tggcttcgac gagaagtggc agaccttcgc
     3001 gtttctggac ggggcgcgca tctggacacc ggacgaccgc ttcgatctcg acgccgggga
     3061 gctggagcag gaccgtttct tcctgggcac cggcgtggga atcggatacg agacggtggt
     3121 gggcgcggtg caggtggcgc tgggatacaa gctgaacccg tcggcactcg acgtgcgtga
     3181 cccggacgag gtgctggagg tgctcgaggc cggacagccg ctcagctcgg tgccggaaga
     3241 ctcgcggcgg cggttccagc tgcacttctc gatcggagcg acgttctgag ccggcaggtc
     3301 agctccgcgg cgttggtgac cgcgtagttc ccgtggcagt tgttgtagat gatgtgcagt
     3361 gccctcgcct tctgcgccga cagctcgaga atgcgccgca ggtgctcttc gagctccgcc
     3421 tcgtcataca ggtaccggta tcgttccgtc gccgggtcgt tccggcgctc ccaggtctcg
     3481 acccggcggc cgtgcagccg catgatcgcg aggcggggcg acgtcaccgc gaccctcggc
     3541 ggcatgctgc tcgccagacc ctgcggaccg tccaccacca cgtaggtcag gtccagatcg
     3601 gcgagcaacc cgagcgtgcg ctcccccacg cggcccctca tccacgaatg gctccgaagc
     3661 tcgactgcgc cctggtccga gcccagtcgg cgccgcacgt ccgccaggac ggcggcactc
     3721 gccctggagg gctggaacca gcgcgggaac tggaacagga tcgagcccag cttgcccgcc
     3781 gcgcgaagcg gctcgagggc accgaggaat cgtcgccaga cttcgtccat cagggcgggc
     3841 gggagatcgc ggccgtacag cggtgcaccg gcggtcgcac gggacggcag gtcccggcgg
     3901 agccagtcgg gaaggcggcg cacatccgcg ccgtgtccgg tcatgaggcc gtgcgccttc
     3961 aggtcgaaga cgaagtggtc cggcgtgcgc ctcgcccatt cggctgccat ccctctcgtc
     4021 gggagggaat agtaggtggc atccacttcc acgacggggt accggctcgc atagaaccgc
     4081 aggcggtcct cggcgctctc gacccctcgc gggtagaaga cgttgccggt ggtcagcgtg
     4141 gggtccgtcc atcccgccac cccgaccagg acgcgggtgc gatccagcat ggacaggccg
     4201 aggggggcgc cgaatccggc gaggtccatg cggtgccgcg cgtggtggag gcccggatcg
     4261 tggatccggt cccaccccgg tgggtcggcg ggacaccgcg tctcgacggc ctccagatcc
     4321 tccgggagcg gctccgcggg gccgaggccc cgggccagca tctcggccgt ccggcgcggc
     4381 gcctctcgcg acagctcggc gatcagtcgc gactccggga ggttccgcca gtatcgcttc
     4441 ggcatctccg cccgcatggc gccgggattg agccgggccg ggttgaaggc gccggcgtag
     4501 taggcgcgcc agagctcctc cagctcgtcc ccggtcggcg cagaggcgcg cgcggcgcca
     4561 ggcgtgaagc gcagctcgcg acgatcccag tgcgcgcagc gctcgggagt gaggatggac
     4621 catcgcatgg cgcggaaccg gcgcgcgaag aacggcgcgg tcgcttccac caccaggtgg
     4681 gtcggctcga accacgccac gtaggcgggg tcggtctcgc tggtcgcacg caccgcccgg
     4741 aagcgcacga aggccttcat cttgtgcgcg gagcgcttga ccgccctcgc catctcgaac
     4801 aaccgccgga cttgggggtc cgtcgcgagg gccaggagat gccgctcgcc gccggtgtga
     4861 cgccacagga cccggtagag caggtcccag cgatctgaag cccgatgaca cgcgaccatc
     4921 gcggcgagtc ggaggaatcg cgcggatacc tgtggagcga tggcacc
//
LOCUS       DASUYN010000494         8959 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1700019, whole genome shotgun sequence.
ACCESSION   DASUYN010000494 DASUYN010000000
VERSION     DASUYN010000494.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8959)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8959)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8959
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1700019"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..867
                     /gene="cobA"
                     /locus_tag="VF061_09590"
     CDS             <1..867
                     /gene="cobA"
                     /locus_tag="VF061_09590"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: protein motif:HMM:TIGR01469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004851 - uroporphyrin-III
                     C-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0019354 - siroheme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HEX6669800.1"
                     /translation="HLGIADVIVDLARRHPPPRPRLGRRGGNPGRIVRGTVHLVGGGP
                     GDPGLITARGLDLLRRADVVVHDRLVGSALLEEARAGAEMVDVGKGRGHAPLSQEEIN
                     RLLLERARAGRSVVRLKGGDPFVFGRGSEELDACRAAGVPCEVVPGVSSAIAGPAAAG
                     IPVTARGIARSFAVVTAHQAGDTAADMAPLAGVDTIVVLMGCSALPRFTAALIAAGRD
                     AGTPAACIQSATTPEQRVTLATLGTIAEAAARDGLEAPVVTVIGEVARLGAVGPSPVA
                     LAEPAAVARGTA"
     gene            complement(881..2215)
                     /locus_tag="VF061_09595"
     CDS             complement(881..2215)
                     /locus_tag="VF061_09595"
                     /inference="COORDINATES: protein motif:HMM:NF016994.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="erythromycin esterase family protein"
                     /protein_id="HEX6669801.1"
                     /translation="MSRIARGVARHSGATVALLRETAEPFTDIGDADLGALLERIGGA
                     RAVLLGEATHGSAEFYRMRARITRELVERKGFSIVAVEADWPDAAWVDRYVRLATSRP
                     AGPPPFSRFPRWMWRNAEVREFVEWLRTHNAAIPEPGRRLGFYGLDLYSLYGSIGVVL
                     NYLDQVDPDAARLARSRYGCLTPWTGNPAAYGREAVTGRHAGCEDEVVATLVDLVSRR
                     LEYAQMDGTRFFDAAQNARLIANAERYYRVMYQGSVVSWNLRDQHMFDTLASLLAFHG
                     PGSRAVVWAHNSHIGDAAATQMGQQGEHNIGRLCRNAYGAGAYLVGFGTDHGTVAAAP
                     DWDEPMEVMRVRPSHPESYERMCHQCGIPAFLLALGEPARPGVRDELTEPRLERAIGV
                     VYRPDTELASHYFAASLPAQFDEYIWFDGTAAVTPLAGPVAPGLPETYPFGL"
     gene            complement(2212..2895)
                     /locus_tag="VF061_09600"
     CDS             complement(2212..2895)
                     /locus_tag="VF061_09600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX6669802.1"
                     /translation="MNVRLASAGACELAVPTEGPALPGLLAWPDHPSALVLFAHGSGS
                     SRLSRRNAAVAGQLRAAGLATFLFDLLTPEEAERRAAVFEIGPMAERLHLAAEWLTAR
                     SEVAGLAVGYFGASTGAAAALCAAAIPGSRVGAVVSRGGRPDLAGDDLERVAVPTLLI
                     VGSRDEAVLELNRRAYWRLNCTKRLLVVPGATHLFEEPGTLEEVGEAAAGWFVEHLVL
                     APRWHGDRR"
     gene            complement(2892..3539)
                     /locus_tag="VF061_09605"
     CDS             complement(2892..3539)
                     /locus_tag="VF061_09605"
                     /inference="COORDINATES: protein motif:HMM:NF012383.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase family protein"
                     /protein_id="HEX6669803.1"
                     /translation="MYFQDRYDAGRRLADLLERYRGDHPVVLALPRGGVVVGYEVARA
                     LEAPLDVLLVRKLGVPGAEEIAMGAIAAGTTLVDADLVARLGIPQSAIREAISRETEE
                     LNRRERAYRGDRPPVPIAGRTVIVVDDGLATGATAQAAVRSLRPRAPRRIVFAAPICS
                     GDGAAALRRVADDVECLECPPEMQAVGWWYQDFSPTTDAEVVRCLREAAARRVPA"
     gene            complement(3586..4545)
                     /locus_tag="VF061_09610"
     CDS             complement(3586..4545)
                     /locus_tag="VF061_09610"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016208 - AMP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEX6669804.1"
                     /translation="MTRRPAGPQALRVRSVLLPLDGSSFAEQAIPWAVTIARSARARL
                     RLVLVHQPPEPPPADRRSRQLYTRVELALRRSQRDYLRAVAARIKAGGPLQVTTVTLE
                     GIPAAAISAYTADVGVDLVVMTTHGRGGLERAWLGSVADQLVRGLEIPVLLIRPTEGA
                     GVSPEAGEILVALDGSRRAEAALPPAMAIAGLLRARLTLLQAVAPVPMMVDAPTPFAG
                     SFDEELSSLRRSEAKDYLEDVAAEVTAAGVEARPTAVLATHPLEAIRAAARAPGVGMI
                     AVATHGRSGLRRMVLGSVADKLVRTSELPVLVTRPRRTSAPSS"
     gene            complement(4542..4727)
                     /locus_tag="VF061_09615"
     CDS             complement(4542..4727)
                     /locus_tag="VF061_09615"
                     /inference="COORDINATES: protein motif:HMM:NF022577.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2892 domain-containing protein"
                     /protein_id="HEX6669805.1"
                     /translation="MRANIGGFERVFRLVVGIMILGLYGALPEPWRYLTLVGLVPFGT
                     ALTGFCPMRAALRRRTV"
     gene            4846..6084
                     /locus_tag="VF061_09620"
     CDS             4846..6084
                     /locus_tag="VF061_09620"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing sensor histidine kinase"
                     /protein_id="HEX6669806.1"
                     /translation="MSPSEASPRTSTQERLERLVITTSALIAEVSLDGVLRHVVQAAA
                     ELIGAHYAAVGVLAPDGRLLEKFTTHGVDEELRARIGDPPRGHGILGLVIREARPIRL
                     PDLTRHPESYGFPPHHPEMHSFLGVPIVGRRGAFGNLYLTEKIGGELFTEEDEYIAVL
                     LASSIAAVVENARLHEESARLLEEVQQLHRTRERFFAMVNHELRNALAAVYGWAEMLV
                     RKKDPATVPQAAFEVLDSAQQAVALINDLLDLSRLDEDRLKPVIRAVEPGHVVKRAMG
                     RLTPAAEARQVTLRLEVTPGLPTCETDASRVEQILVNLLGNAIQHTTERSTVGIDITA
                     GRSTIVFTVTDQGPGIPESELEHVFDIYTSKKDGNMRGSGLGLPLSRRLARLLGGNLW
                     AVARRGGGGEFVLELPASES"
     gene            6143..6838
                     /locus_tag="VF061_09625"
     CDS             6143..6838
                     /locus_tag="VF061_09625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013804409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX6669807.1"
                     /translation="MKILVVEDDRKVAGFIEQGLHEEGYVVDVAPDGDEALMLAHVYE
                     YDVILLDVVLPKKNGFQVATELRREGRNTPILMLTSRDAVEDVVRGLDAGADDYLAKP
                     FQFDELLARIRALHRRGGAERLEVLRYGPITLDRLRHTATINDHRLDLTPKEFQLLEY
                     FLLHPEEVVRRTTLLEKVWDMHFDPESNVVDVHVGNLRRKLSQAAGESLLATVRGVGF
                     SLRRATGSQGVEA"
     gene            complement(6904..7383)
                     /locus_tag="VF061_09630"
     CDS             complement(6904..7383)
                     /locus_tag="VF061_09630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669808.1"
                     /translation="MTTMMPVAPTVSFVGSLLSDIHEEWMREIADTLSPALSESADFW
                     SRWTIARFLDDRFAGRFRLERNLVVALAPLLTPGTAEGLAAAARGVERTASALIEAGR
                     RRETRALTARLTRRFIDGLALWCVEVEMATEELEQSDLPAVAASLVARLQAASALGG"
     gene            complement(7424..7945)
                     /locus_tag="VF061_09635"
     CDS             complement(7424..7945)
                     /locus_tag="VF061_09635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669809.1"
                     /translation="MRVRCEPALAMLALVACGGHGARGAVALPPVPVEGPARDVRALA
                     GSWRGEFVSETGLQRGVIAFDLPRGRDTAYGHVVFSGPMPPPGCTDAVSSATEPREPT
                     ETVLALARVTVGGSSVGGWLESYRDPRLGCPVDTWFEGTIQGDTLGGMYFTHPADTAA
                     TVRLGTWWAARTR"
     gene            8096..>8959
                     /locus_tag="VF061_09640"
     CDS             8096..>8959
                     /locus_tag="VF061_09640"
                     /inference="COORDINATES: protein motif:HMM:TIGR02822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
                     /protein_id="HEX6669810.1"
                     /translation="MLAMLLDAPGRPLRPVAVPTPEPGPGQLLLRILACGVCRTDLHV
                     ADGELPNPRLPLVLGHEIVGEVVASGPGRGGEAFATGERVGVPWLAWTCGECRYCRAG
                     RENLCDHARFTGYQVDGGYAEYTVADARFCFRLPAGYRDVDAAPLLCAGLIGHRALRA
                     AGEAERLGIYGFGAAAHLVAQVARHEGRRYFAFTRPGDAEAQAFARELGAAWAGDSGE
                     SPPEPLDAAIIFAPVGALVPAALRAVSKGGTVVCAGIHMSDIPSCPYSLLWGERTLRS
                     VANLTRQDGLDF"
BASE COUNT         1304 a         3220 c         3242 g         1193 t
ORIGIN      
        1 cacctcggca tcgccgacgt gatcgtggac ctcgcccgcc ggcatccccc gccgaggccg
       61 cgcctgggcc gccgcggtgg aaaccccggc aggatcgttc gcggcacggt gcacctggtg
      121 gggggcggtc cgggagatcc cgggctcatc accgcacgcg ggctggacct gctgcggcgg
      181 gccgacgtgg tggtgcacga ccgtctggtg ggctcggcgc tgctggagga ggcgcgagcg
      241 ggtgccgaga tggtggacgt gggcaagggt cgcgggcacg ccccgctctc gcaggaggag
      301 atcaaccgcc tgctgttgga gcgcgcgcgg gccggccgca gcgtggtgcg cctcaagggc
      361 ggagatccgt tcgtgttcgg gcgggggagc gaggagctgg acgcatgccg cgccgctggc
      421 gtcccctgcg aggtggtgcc cggggtgtcg agcgcgatcg cggggcccgc ggccgccgga
      481 attccggtca cggctcgggg catcgcccgc agcttcgcgg tcgtcaccgc gcaccaggcc
      541 ggggacaccg ccgccgacat ggcaccgctc gccggcgtgg acaccatcgt cgtgctcatg
      601 gggtgctcgg cgctgccccg gttcaccgcc gccctgatcg ccgccggccg cgacgcgggc
      661 acgcccgccg cgtgcattca atccgccacc acgccggagc agcgggtgac cctggcgacg
      721 ctcggaacga tcgcggaggc cgccgcgcgc gacggactcg aggcgccggt ggtgacggtg
      781 atcggggagg tggcgcgcct gggagcggta ggtccgtcgc cggtcgcgct ggcggagccg
      841 gccgcagtgg cccgtggaac ggcctagccc gtccgcgggg tcagagtccg aaggggtagg
      901 tctccggcag accgggtgcg accggtccgg cgaggggcgt cacggcggcg gtgccgtcga
      961 accagatgta ctcgtcgaat tgcgccggca acgaggcggc gaagtagtgg ctcgccagct
     1021 cggtgtccgg ccggtagacg accccgatgg cccgctccag ccgcggctcg gtcagctcgt
     1081 cccggacccc ggggcgggcg ggctcgccga gcgccaggag aaacgccgga atcccgcact
     1141 ggtggcacat ccgctcgtag ctctcgggat gcgagggacg gacacgcatc acctccatcg
     1201 gctcgtccca gtccggagcg gcggccacgg ttccgtgatc ggtcccgaag ccgaccagat
     1261 acgcaccggc accataggca ttgcggcaga gacgcccgat gttgtgctcc ccctgctggc
     1321 ccatctgagt cgcggcggcg tcgccgatgt gcgagttgtg cgcccacacg accgcgcggg
     1381 agcccggccc gtggaaggcc aggagtgacg ccagggtgtc gaacatgtgc tgatcgcgca
     1441 ggttccacga cacgacggag ccctggtaca tgacccggta gtaccgttcg gcgttggcga
     1501 tgagccgcgc gttctgggcg gcatcgaaga accgggtccc gtccatctgg gcatactcca
     1561 gcctgcgcga taccaggtcc accagcgtag ccacgacctc atcctcgcac ccggcatggc
     1621 gtccggtgac cgcctcccgg ccgtaggccg caggattgcc ggtccacggc gtgagacagc
     1681 cgtagcgcga gcgcgccagc cgggcggcgt cggggtccac ctggtcgagg tagttcagca
     1741 cgacgccgat ggagccgtag aggctgtaca ggtcgaggcc gtagaagccc agccggcggc
     1801 cgggctcggg gatggcggcg ttgtgcgtcc ggagccactc cacgaactcg cgcacttcgg
     1861 cgttgcgcca catccaccgc ggaaagcggc tgaacggcgg tgggcccgcc gggcgggacg
     1921 tcgcgagtct cacatagcgg tcgacccagg cggcgtccgg ccagtcggcc tcgacggcga
     1981 cgatggaaaa gcccttccgc tcgacgagct cgcgggtgat gcgggcgcgc atgcggtaga
     2041 actcggcgct gccgtgggtg gcctcgccca gcagcacggc ccgggcgccg ccgatccgct
     2101 cgagcagggc gccgaggtcc gcgtccccga tgtccgtgaa cggctcggcc gtctcacgca
     2161 ggagagccac ggtcgcgccc gagtggcggg ccacgccccg ggcgatccgg ctcaccgccg
     2221 gtctccgtgc cacctgggtg ccagcaccag gtgctcgacg aaccaccctg ccgccgcctc
     2281 ccccacttcc tcgagcgtcc cgggctcctc gaacaggtgc gtcgcgccgg ggacgaccag
     2341 gaggcgcttg gtgcagttca gacgccaata ggctcggcgg ttgagctcga ggacggcttc
     2401 gtctcgactc cccacgatga gcagggtggg gaccgcaacc cgctcgaggt cgtcgccggc
     2461 gaggtccgga cggcccccgc gcgacaccac cgcacccacg cggctgccgg ggatcgcggc
     2521 agcacagagc gccgcggcgg cgccggtgct cgcgccgaag tagccgaccg cgagaccggc
     2581 gacctcgctc cgggccgtca accactccgc ggccaggtgc agccgctccg ccatggggcc
     2641 gatctcgaac acggcggccc gccgctccgc ctcctccgga gtgaggaggt cgaagaggaa
     2701 ggtggccagg ccggcggcgc gcagctggcc ggcgacggcg gcgttccggc ggctcaggcg
     2761 gctgctcccg ctgccgtgcg cgaagagcac gagcgcgctg gggtgatcgg gccacgccag
     2821 cagtcccggc agagccggcc cttccgtcgg cacggccagc tcgcacgcac ccgccgaggc
     2881 gagcctgacg ttcatgccgg taccctccgg gccgcggcct cgcgcagaca tcgcaccacc
     2941 tcggcgtccg tcgtgggcga gaaatcctga taccaccagc ccaccgcctg catctcgggc
     3001 gggcactcga ggcactccac gtcgtcggcc acccgccgaa gagccgccgc gccgtcaccg
     3061 gagcagatcg gcgcggcgaa aacgatgcgg cgcggtgcgc ggggtcgcag cgagcgcacg
     3121 gcggcctgcg ccgtggcgcc ggtggccaga ccgtcgtcca ccacgatcac cgtgcggccg
     3181 gcgatcggca cgggaggccg gtcgccccgg taggcacgct cgcgacggtt cagctcctcg
     3241 gtctcccggc tgatggcctc ccggatggcc gactgcggga taccgagccg ggcgaccagg
     3301 tcggcatcca cgagtgtggt cccggccgcg atcgcgccca tggcgatctc ctcggcgccg
     3361 ggaacaccga gcttgcgcac gagcaacacg tcgagcggtg cctccagcgc ccgagccacc
     3421 tcgtacccca ccaccactcc cccgcgcggc agggcgagga cgacgggatg gtcgccgcgg
     3481 taacgctcga gcaggtcggc caatcggcgc ccggcgtcgt atcggtcctg gaaatacatc
     3541 ggaccctcca tcgcacagtc ggttgaagcc ggtgtaattg actgttcagg aggagggagc
     3601 ggaggttcgc cgggggcggg tgaccagcac cggaagctcg ctggtgcgta ccagcttgtc
     3661 ggccacgctg ccgagcacca tgcgccgcag accgctgcgg ccgtgggtcg ccaccgcgat
     3721 catgccgacc cccggcgccc gtgccgccgc ccggatcgcc tcgaggggat gggtggcgag
     3781 caccgcggtg ggacgcgcct ccacccccgc ggccgtgacc tccgcggcca cgtcctccag
     3841 atagtccttc gcctcgctcc gccgcagcga ggagagctcc tcgtcgaacg agccggcgaa
     3901 cggcgtcggc gcatccacca tcatcggcac cggggccacc gcctgcagca gcgtcagccg
     3961 ggcgcgcaac agaccggcga tcgccatcgc gggaggcagg gcggcctccg cccgccgcga
     4021 tccgtcgagc gcgaccagga tctcccctgc ttcgggcgag acccccgctc cctcggtggg
     4081 acggatcagc agcacgggga tctcgaggcc gcggaccagc tggtcggcga cgctgccgag
     4141 ccacgcgcgc tccagccctc cccgaccgtg ggtggtcatg accacgagat ccacacccac
     4201 gtccgcggtg taggcggaga tcgccgcggc cgggatgccc tccagggtca ccgtggtgac
     4261 ctgcaggggg ccgccggcct tgatccgcgc tgcgaccgcg cgcaggtagt cgcgctgtga
     4321 cctccgcagc gccagctcga ccctggtgta gagctgccgc gaccgacggt ccgccggggg
     4381 aggttcgggc ggctggtgga ccagcacgag ccgcagacgg gcccgggccg atcgggcgat
     4441 ggtgaccgcc cagggaatcg cctgctcggc gaagctggat ccgtccagcg gcagcaggac
     4501 ggagcgcacc cgcagggcct ggggtcccgc cgggcgcctc gtcacaccgt ccgccgccgc
     4561 agcgcggccc gcatgggaca gaagccggtc agcgccgtcc cgaacggcac cagcccgacc
     4621 agggtgagat agcgccacgg ctccggcagc gccccataca gccccaggat catgatcccg
     4681 acgaccagcc ggaatactcg ctcgaacccg ccgatattcg ctctcatcgg ttcctccctc
     4741 gcctctgccg caagctaacc ccggggtcat gaagcgagga tgaagccgct gcgaagcaac
     4801 cgcagggggt tccgggcacc ggcggcgcct tgcagattca ggctggtgag cccctcggaa
     4861 gcctcgcccc gcacctcgac ccaggaacgt ctggagcgcc tggtcatcac gacctccgcg
     4921 ttgatcgcgg aagtctcgct ggacggagtc ctgcggcacg tggtccaggc ggccgccgag
     4981 ctcatcgggg cgcactacgc cgccgtgggc gtgctggcgc cggacggacg cctgctcgag
     5041 aagttcacca cccacggggt ggacgaggag ctgcgggcca ggatcgggga cccgccgcgg
     5101 ggccacggca tcctcggcct ggtgatccgc gaggcccggc cgatccggct tcccgatctg
     5161 acccgccatc ccgagtccta cgggttccca ccccatcatc ccgagatgca ctccttcctg
     5221 ggggtgccga tcgtcggccg gcggggcgcc ttcggcaatc tctatctcac cgagaagatc
     5281 ggcggcgagc tcttcaccga ggaggacgag tacatcgccg tgctcctggc gagcagcatc
     5341 gcggcggtgg tggagaacgc ccggctgcac gaggagagcg cccggctgct ggaggaggtg
     5401 cagcaactcc atcgcacccg cgaacgcttc ttcgccatgg tgaatcacga gctgcgcaac
     5461 gcgctcgcgg cagtctatgg atgggcggag atgctggtcc ggaagaagga tccggcgacg
     5521 gtgccgcagg cggccttcga ggtgctcgac tcggcgcagc aggccgtggc gctgatcaac
     5581 gacctgctcg atctcagccg gctggacgag gaccggctca agccggtgat ccgtgcggtc
     5641 gagccggggc acgtggtgaa gcgggcgatg ggccggctga cgccggcggc ggaggcgcgt
     5701 caggtcacgt tgcggctgga ggtgaccccc ggccttccta cctgcgagac cgacgcgagc
     5761 cgggtcgagc agatcctggt gaacctgctg ggcaatgcga tccagcacac cacggagcgc
     5821 agcacggtcg ggatcgacat cacggccggc cggagcacga tcgtcttcac cgtcaccgac
     5881 cagggccccg gcattcccga gtcggagctg gagcacgtct tcgacatcta caccagcaag
     5941 aaggacggca acatgcgggg ctccgggctg ggacttccgc tctcccgccg gctggcccgg
     6001 ctcctgggcg gaaacctgtg ggccgtggcc cgtcggggtg ggggcggcga gttcgtgctg
     6061 gagctccctg cctcggaatc atgaagagat cttcacatcc acttcgcgcg gggctcacgg
     6121 tcatgatcgc agattgtcgg ccatgaagat tctcgtggtg gaggacgacc gcaaagtcgc
     6181 cgggttcatc gagcaggggc tgcacgagga ggggtacgtc gtggacgtcg ccccggatgg
     6241 cgacgaagcc ctgatgctcg ctcacgtgta cgagtacgac gtgatcctgc tggacgtcgt
     6301 gctccccaag aagaacggct tccaggtggc caccgagctg cggcgcgagg gccggaacac
     6361 cccgatcctg atgctgacct cgcgggacgc cgtcgaggac gtggtgcggg ggctcgacgc
     6421 cggcgcggat gattacctgg ccaagccctt ccagttcgac gagctgctgg cgcggatccg
     6481 ggcgctgcac cggcggggcg gggcggagcg gctcgaggtg ctgcgctacg gcccgatcac
     6541 gctcgaccgg ctgcggcaca ccgccaccat caacgaccac aggctcgatc tcacgccgaa
     6601 ggagttccag ctgctggagt acttcctgct ccacccggag gaggtggtgc gccggacgac
     6661 gctgctggag aaggtgtggg acatgcactt cgaccccgag agcaacgtgg tcgacgtgca
     6721 cgtcggcaac ttgcgccgga agctgagcca ggcggccgga gagtcgctcc tggcgacggt
     6781 gcgcggcgtg ggcttcagtc tccgccgggc cacgggctcg cagggcgtcg aggcgtaggc
     6841 gaaaaaatcc gcggactccg acgcatcggg tgcatcggag tccaggatcg taccgcggtg
     6901 agatcagccc ccgagtgccg aggcggcctg gagccgcgcc accagcgagg cggccaccgc
     6961 cggcaggtcc gactgctcca gctcctccgt ggccatctcc acctcgacac accagagtgc
     7021 cagaccgtcg atgaagcgtc gtgtgagacg ggcggtcagg gcccgggtct cgcgccgccg
     7081 gcccgcctcg atcagcgccg aggccgtgcg ctccactcct cgcgcagccg ccgccagccc
     7141 ctccgccgtg cccggcgtca ggagcggggc gagcgccacc accagattgc gctccagccg
     7201 gaagcgaccg gcgaaccgat cgtcgaggaa ccgggcgatc gtccaccggc tccagaagtc
     7261 ggcgctctcg ctcagtgcgg gcgagagcgt gtccgcgatc tcccgcatcc actcctcatg
     7321 gatgtccgac agcagcgagc ccacgaacga gacggtgggc gcgacgggca tcatggtcgt
     7381 catggcaggc tcctccagct gcgtgtgctg atccgcgagc gcgctaccgg gtgcgcgccg
     7441 cccaccaggt gcccagccgc accgtcgcgg cggtgtcggc ggggtgggtg aagtacatgc
     7501 cccccagcgt gtcgccctgg atggttccct cgaaccaggt gtccaccggg caccccagcc
     7561 ggggatcgcg atacgactcc agccagcctc ctacgctgga cccgcccacg gtcacccggg
     7621 cgagagcgag gacggtctcg gtcggctccc tcggctcggt cgcgctcgag acggcgtcgg
     7681 tgcaacccgg cggcggcatc ggcccgctga agaccacgtg gccataggcg gtatcccggc
     7741 cgcgcggcaa gtcgaaggcg atcacgccgc gctgcaggcc ggtctcgctg acgaactcgc
     7801 ctctccaact gcccgcgagg gcgcggacgt cccgggcggg tccctcgacc ggtaccggtg
     7861 ggagcgcgac cgccccgcgc gccccgtggc cgccgcatgc cacgagggcg agcatcgcca
     7921 gggccggttc acagcggacg cgcatcggac ctcctcggtc ggcaagccga tggggcagac
     7981 tgcgatccca atctgccctc cggaacggga accggccgtg aagcgatcgt gaaggtgtca
     8041 tcacgaccgc acgtaccggg cttgtgacca cctccgccgg gtggcacact gcggcatgct
     8101 ggcgatgctc ctggacgctc caggccggcc gcttcgcccg gtcgcggtcc cgacgcccga
     8161 gccggggccg gggcagctgc tgctccggat cctcgcctgc ggcgtctgcc ggaccgacct
     8221 ccatgtcgcc gacggcgagc tgcccaaccc caggctgccg ctcgtgctgg gtcacgagat
     8281 cgtgggcgag gtagtcgcgt ccggccccgg tcggggcggg gaggcattcg ccaccggcga
     8341 gcgggtcgga gtaccgtggc tggcgtggac ctgtggggag tgtcgctact gccgggccgg
     8401 acgggagaac ctctgcgacc acgcgcgctt caccggctac caggtggacg gcggctacgc
     8461 ggaatacacc gtggccgatg cgcggttctg tttccggctg ccggccggct atcgcgacgt
     8521 ggatgcggcg ccgctgctct gcgccggcct catcggccac cgcgcattgc gggcggcggg
     8581 cgaggccgag cggctgggga tctacggctt cggcgccgcg gcgcacctcg tggcccaggt
     8641 ggcccgacac gaaggccggc ggtacttcgc cttcacccgg ccaggcgacg ccgaggcgca
     8701 ggcgttcgcc cgggagctgg gcgcggcctg ggcgggcgac tccggcgagt ctccgcccga
     8761 gccgctcgac gccgcgatca tcttcgcgcc cgtgggggct ctggtgccgg cagcactccg
     8821 cgcggtatcc aagggcggca cggtggtctg cgccggcatc cacatgagcg acatcccctc
     8881 ctgtccctac tcgctgctgt ggggcgagcg gacgctgcgc tcggtcgcca atctcacccg
     8941 ccaggacggc ctcgacttc
//
LOCUS       DASUYN010000495         2241 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1481343, whole genome shotgun sequence.
ACCESSION   DASUYN010000495 DASUYN010000000
VERSION     DASUYN010000495.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2241)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2241)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2241
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1481343"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2241
                     /locus_tag="VF061_09645"
     CDS             <1..>2241
                     /locus_tag="VF061_09645"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX6669811.1"
                     /translation="AGERALPARRGARRPVVLAAAAVALAVLGTTIGLAGRSSAPPEG
                     VNPRHSILLLPFDNLRDDPSVEWMREGSVSMLGLNLAQWNDLTVVDQERLSDLLGRHD
                     VEPREDIGLELARRLARDAGVWTVVLGDFTRTGDSLHLAARVYDVATGERISIARVDD
                     RTEDDARHLFDQLAAELLNLSGAPTDLPVDLARSTTQSLEAYRAYLNGVEQLNRWDLA
                     GAERELGRALAIDTTFGLAYYKLALTRGWLVGVDDSIADHAIVRATAHSANLPAHDRT
                     VISAYRAFIGGEFTDARALYQQLLARDPTDADAWYGLGEAWFHDTTGTNQAPAWTEAF
                     RAFKRSLALDSEYALAYDHVQTMLASAAGQRPTYAMIGTDSFALARAGGPEGGMLLDS
                     TALAGAVRRARTEALTTARSWVASQPATLRAHGAMVDAYLASGNYNAALSEVNRFRQT
                     SPVHPELPFVEAKIRFASGDVAKAADQLRTALDTVAPQDFRPYQGTPTVVYDIAAAAN
                     VFAYQGDLANAAKALDLADQVRREVVHHHEPEATSRFDESWRRVVLGELYAAMGVPAS
                     SLRQVWQSAAEAGRTAPAEKRVHLAHSGASAAIGLFTGPAADSTAIAEYRAMTGDRLS
                     KEVRALLALTRGDSSGARLALAEPDTVDAKQMYGLYRRPLAAQAYYLLGDYQTTLRVL
                     QDFEPATLRTAGFDSRWGMLGRVRLLRAAAYEQLGRRAEAREEYRQVLAQWTAADTAL
                     QPFIRQ"
BASE COUNT          321 a          828 c          792 g          300 t
ORIGIN      
        1 ccgcgggcga gcgggcactg cccgcaaggc gcggggcacg ccggccggtc gtgctcgccg
       61 cagccgcggt ggccctcgcg gtgctcggca ccacgatcgg tctcgcgggt cggagcagtg
      121 caccgcccga gggcgtgaac cccaggcatt ccatcctgct gctgccgttc gacaacctgc
      181 gcgacgatcc ctcggtggaa tggatgcgcg agggcagcgt cagtatgctg gggctcaacc
      241 tcgcgcagtg gaacgacctg accgtggtgg accaggagcg gctctccgac ctgctcggcc
      301 gccacgacgt cgagccgagg gaagacatcg gcctcgagct cgcccggcgc cttgcccggg
      361 acgcgggtgt gtggacagtc gtcctgggcg actttacccg gaccggcgac tcgctgcacc
      421 tggccgcacg ggtctacgac gtcgcgacgg gcgaacgcat cagcatcgcc cgggtggacg
      481 accggaccga ggacgacgcc cgccacctct tcgatcaact cgcggcggaa ctgctcaatc
      541 tctccggagc gccgaccgac ttgcccgtgg acctcgcgcg atccaccacc cagtcgctgg
      601 aggcctaccg cgcctacctc aacggggtgg agcagctcaa ccggtgggat ctggccgggg
      661 cggagcggga gctggggcgg gcgctcgcca tcgacacgac cttcgggctg gcgtactaca
      721 agctggctct cacccgcggc tggctggtcg gggtggacga ctcgatcgcc gaccatgcca
      781 tcgtccgcgc cacggcgcac tccgccaacc tgccggccca cgaccggacc gtcatcagcg
      841 cctaccgcgc cttcatcggc ggcgagttca ccgacgcgcg agcgctctac cagcagctgc
      901 tcgcccggga tcccaccgac gccgatgcct ggtacggcct gggcgaggcg tggttccacg
      961 acacgaccgg caccaatcag gcgccggcct ggaccgaggc attccgggcc ttcaagcgct
     1021 cgctggcact ggattcggag tacgcgctgg cctacgacca cgtgcagacc atgctggcct
     1081 ccgcggcggg gcagcggccc acctatgcga tgatcgggac cgactcgttc gccctggcgc
     1141 gggccggcgg gcccgagggc ggcatgctgc tcgacagcac cgcgctggcg ggcgccgtgc
     1201 gccgggcccg aaccgaggcg ctgaccaccg cccggagctg ggtggcatcg cagccggcca
     1261 cgctgcgggc tcatggcgcc atggtggatg cgtacctggc ctcggggaac tacaacgcgg
     1321 cgctctccga ggtgaaccgg ttccgccaga cttcgccggt ccacccggag ctgccgttcg
     1381 tggaggcgaa gatccggttc gcctccggcg acgtcgccaa ggcggccgac cagctccgca
     1441 ccgcgctcga tacggtggca ccgcaggact tccggcccta ccagggcacc cctaccgtgg
     1501 tgtacgacat cgccgcggcc gccaacgtct tcgcctacca gggcgacctg gccaacgcgg
     1561 ccaaggcgct ggacctggcg gaccaggtcc ggcgcgaggt ggtccaccac cacgagccgg
     1621 aagcgaccag ccggttcgac gagtcgtggc gccgggtggt gctgggcgaa ctctatgcgg
     1681 caatgggagt gccggcctcg tcgctccggc aggtctggca gagcgccgcc gaggcgggac
     1741 ggacggcgcc ggcggagaag cgggtgcatc tggcccacag cggggcctcc gccgcgatcg
     1801 ggctgttcac cggtcccgcc gccgacagca ccgccatcgc ggagtaccgg gccatgaccg
     1861 gcgaccggct ctccaaggaa gtgcgcgccc tgctcgcgct cacccggggc gattccagcg
     1921 gtgcccgctt ggcgctggcc gagccggaca cggtcgacgc caagcagatg tacggtctct
     1981 accggcgccc tctggccgcc caggcgtact acctgctcgg tgactatcag accaccctgc
     2041 gggtgctgca ggacttcgag cccgccaccc tgcgcaccgc ggggttcgac tcccgctggg
     2101 gcatgttggg tcgggtgcgc ctgctccgcg cggcggccta cgagcagctc ggccgccggg
     2161 ccgaggcgcg ggaggagtac cggcaggtgc tggcccagtg gaccgccgcc gacacggccc
     2221 tgcagccgtt catccgccag g
//
LOCUS       DASUYN010000496         3054 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_816356, whole genome shotgun sequence.
ACCESSION   DASUYN010000496 DASUYN010000000
VERSION     DASUYN010000496.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3054
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_816356"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..960)
                     /locus_tag="VF061_09650"
     CDS             complement(<1..960)
                     /locus_tag="VF061_09650"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX6669812.1"
                     /translation="MSDPLALLREGLRDHYTFERELGRGGMATVWLAADLKHDRPVAL
                     KLLHPELAASLGPERFQREIRLAARLQHPHVLTVLDSGETQGRLWFTMPYVEGESLRD
                     RLRRERQLPVDAATRIATEAARGLEYAHQHGVVHRDVKPENILLTRDGSTLVADFGIA
                     RALGGDDGLTQTGLAIGTPAYMSPEQAAGDRTLDPRTDQYALAAVLYEMLAGEPPWTG
                     ATAQVMIARRLSEPAPSVRAVRPNVPGHVDDAIRKALAPVAADRFAGMVDFVHALQAA
                     PTRATPPATPAAPAGGPSGAGAPAGPRRIPAAALALVLGLLVGA"
     gene            complement(1117..>3054)
                     /locus_tag="VF061_09655"
     CDS             complement(1117..>3054)
                     /locus_tag="VF061_09655"
                     /inference="COORDINATES: protein motif:HMM:NF024180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAT domain-containing protein"
                     /protein_id="HEX6669813.1"
                     /translation="DGGTAEAQQGRGVLLVLRQDYTGALRLLDFAARGHASAGDRRAA
                     ALVQLLAGDAQREAGDTTGSRSTLLAALDSLTALGDTVGQIAALVGLGGLAEQLGAPL
                     EAESLYRHGLQRLGSRPVPDLRWRLHAGLASSSRRQGALPQAAEHLRAAVAALDGVAE
                     GMRLEERQAGFLADKWQVYAALALVEQARGRAAEAFAVSERMRGRQMLALLDRGRIAS
                     RSPAGGQEQDLRRRIAELTDELAGATPVSANRGEPPMAQRSLAVVSEALDAAQKAYAA
                     LLAELRESDPTYAAMVAVEPVDWRTTARRLPGDAVLLEYLVTDSASSVLVVTPDTVAA
                     LDLNVDRRQLASLVDFARGVMHRHDGTVASMWRAPLRRLYRVLIEPVEAAGFLAGKRS
                     LLIVPHADLHFLPFGALLAGDAGDRFLVERFELAYAPSADAWLRLGERGRSGGVGRVL
                     ALAPYPDRLPATREEVESIHAEYGARATVLTGPSASAAALGSGMSGHDILHLATVGVL
                     NKHNPLFSHVELAGGGDDARLEVHEVFALPLSGQLVVLSACQTALASGAVADVPPGDD
                     WVGLTQAFLQAGARGVLASLWRVEDRSTARLMELFYRRLAAGASEARALAGAQRELLR
                     EPGRQHPFYWAGFVLSGSGTK"
BASE COUNT          431 a         1131 c         1101 g          391 t
ORIGIN      
        1 ggcgccgacc aggaggccga gcaccagggc gagcgccgcg gccggaatgc gacgcggccc
       61 cgcgggcgcc ccggctccgc tcggaccgcc ggccggggcg gccggcgtcg ccggcggcgt
      121 ggcgcgggtc ggcgccgcct ggagcgcgtg gacgaaatcg accatgccgg cgaaccggtc
      181 cgccgccacg ggggccagcg ccttccgtat cgcgtcgtcc acgtgccccg gcacgttcgg
      241 ccggacggcg cgtacgctcg gcgcgggctc gctcagccgc cgggcgatca tcacctgcgc
      301 cgtggcgccg gtccacggtg gctctcccgc cagcatctcg tagagcacgg cggccagcgc
      361 atactgatcg gtgcgcgggt ccagggtccg gtcaccggcc gcctgctcgg ggctcatgta
      421 cgccggggtt ccgatcgcga ggccggtctg ggtgagaccg tcgtcgccgc cgagcgcgcg
      481 agcgatgccg aagtcggcga cgagcgtgga gccgtcgcgg gtgaggagga tgttctcggg
      541 cttgacgtcc cgatgcacca cgccgtgctg gtgggcatac tcaaggccgc gcgccgcttc
      601 ggtcgcgatg cgggtcgcgg cgtccaccgg gagctggcgc tcgcgccgga gccggtcccg
      661 cagggactcg ccctcgacgt acggcatcgt gaaccacaag cgcccctggg tctcgccgga
      721 gtcgaggacc gtcaggacgt ggggatgctg gagccgggcg gccaggcgga tctcgcgctg
      781 gaaccgctcg gggccgaggg acgcagcgag ctccgggtgg agcagcttga gggcgacggg
      841 gcggtcgtgc ttgagatcgg ctgcgagcca gacggtggcc atgccgccgc gcccgagctc
      901 tcgctcgaac gtgtaatggt ctcgcaggcc ctcgcgcagc agcgccagcg ggtcgctcat
      961 ggggctcggt gcatcatggg tgaggcctaa agtatcccgt cggctcaccg tcccaccagc
     1021 accgccagcc gtgcgcgcgt gttatcgact gcgaccccgg caggtcgccg acggcctcgc
     1081 gcgtcagggg ggattgtcag gctgcaggcg atgacatcac ttcgtccctg agccgctcag
     1141 tacaaacccc gcccagtaga acgggtgctg tcgccccggc tccctcagaa gctcgcgctg
     1201 cgcgcctgcg agggctcgtg cctccgatgc gcctgccgcc agccgccggt agaacagctc
     1261 catgagtcga gcggtcgatc ggtcctccac ccgccagagc gacgccagca ccccacgcgc
     1321 accagcctgg aggaacgcct gcgtcaatcc gacccagtcg tcgcccgggg gcacgtcggc
     1381 aaccgcaccc gatgccagcg cggtctggca tgcgctcagc accaccagct gaccgctcag
     1441 cggcagggcg aagacctcgt ggacctcgag tctggcgtca tcgccacccc cggccagctc
     1501 cacgtgcgag aacagcgggt tgtgcttgtt gagcacgccg acggttgcca ggtgcaggat
     1561 gtcgtggcca ctcatcccgg aaccgagcgc ggccgcggat gccgacgggc cggtgagcac
     1621 cgtggcgcgg gccccgtatt ccgcgtggat gctctccact tcctcccgtg tcgcggggag
     1681 ccggtcgggg tacggcgcca gggccaacac tcggccgacg ccacccgacc tgccacgctc
     1741 gccgagccgg agccaggcgt cggccgaggg agcataggcc agctcgaacc gctccacgag
     1801 gaagcgatcg ccagcgtccc cagcgagcag cgcgccgaag gggagaaagt gcaggtcggc
     1861 gtgcggcacg atcagcagtg accgcttccc ggcgaggaag ccggcggcct ccaccggctc
     1921 gatgagcacc cggtacaacc ggcgcagcgg cgcccgccac atggacgcca ccgtgccatc
     1981 gtgccgatgc atgaccccac gggcgaaatc caccaggctg gcaagctgcc ggcgatccac
     2041 gttcaggtcg agcgccgcca ccgtgtcggg agtgacgacc agcacgctgg aggccgagtc
     2101 cgtcaccagg tactcgagca acaccgcgtc accgggcagc cggcgggccg tggtacgcca
     2161 atccaccggt tcgaccgcca ccatggcggc atacgtcggg tcgctctccc ggagctcggc
     2221 gagcagcgcc gcgtaggcct tctgagcggc gtccagcgcc tcgctcacca cggcgagcga
     2281 tcgctgggcc atcggcggct cgccgcggtt ggcggagacg ggggtcgccc ccgcgagctc
     2341 atcggtcagc tcggcgatcc gccgtcgcag gtcctgctcc tgcccaccgg caggacttcg
     2401 cgacgcgatg cggccgcggt cgagcagggc gagcatctgg cggccccgca tgcgctcgct
     2461 caccgcgaac gcctccgccg cccgcccacg cgcctgctcc accagcgcga gcgccgcata
     2521 tacctgccac ttgtcggcca gaaatccggc ctggcgctcc tccagccgca ttccctccgc
     2581 gacgccatcc agcgcggcaa ccgcggcgcg gaggtgctcg gctgcctgag ggagcgctcc
     2641 ctgccggcgc gacgagcttg cgagcccggc gtggagccgc cagcggaggt ccgggaccgg
     2701 ccggctgccg agtcgctgga ggccgtgccg gtacagggac tcggcctcga gcggggcgcc
     2761 gagctgctcg gcgagcccgc ccaggccgac gagtgcggcg atctggccga cggtgtcgcc
     2821 gagtgcggtc agcgaatcga gggcagcgag caaggtactg cgggagccgg tggtgtcacc
     2881 cgcctcccgc tgggcgtctc ccgcgaggag ctgcaccagc gccgcggccc gacggtctcc
     2941 ggcactcgca tgtcctcgtg cggcgaagtc gagcaggcgg agcgcaccgg tgtaatcctg
     3001 gcgcaggacc agcagcacgc cccgtccctg ctgagcctcg gccgtgcccc cgtc
//
LOCUS       DASUYN010000497         2003 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_598614, whole genome shotgun sequence.
ACCESSION   DASUYN010000497 DASUYN010000000
VERSION     DASUYN010000497.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2003
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_598614"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(58..786)
                     /locus_tag="VF061_09660"
     CDS             complement(58..786)
                     /locus_tag="VF061_09660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669814.1"
                     /translation="MIIDDRHEPPTPQELRAEGRIVNRLDQLERDNRRLRRYVTAMLV
                     VIAMVLGLGASLIWYSSRSGLPGSPQTVAARQFVLRDANGKVRGALGLGDDGAVRLVL
                     SDPNERQRVRLSLLEDGSAGLSFADSSDRKLAVFGLLPDYTTNLALTDPAGIPRAVLG
                     VSPDGSSNLVFADQSGNTRAGLGVDSRGLGTFTLADRSAGGEREELLDTLQMDQGDTL
                     QPASEQAEEPAATGPERRRSRRAP"
     gene            complement(783..>2003)
                     /locus_tag="VF061_09665"
     CDS             complement(783..>2003)
                     /locus_tag="VF061_09665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669815.1"
                     /translation="TLYVQGARSGRQLTASVRLPFAFVDDRLLTLQQRRLVEVLGTSG
                     PNRGAYLFDLTGAGRERAREALSSSQYVGPAPVPLVQYRTWVEKQTIRNVHVTREVVR
                     EGFRGMVLSEAVHDVLGPSINSAKSLFLYGAPGNGKTMIAETISHLLGGDIFVPFAVE
                     VEGQMMILYDPVYHHAESGLNPLEEGEVEGGWLKAPPTHDLRYVKVRRPIVLTGGELT
                     LDQLDLQYDHHTKMYQAPFQLKANGGVLILDDFGRQRVPPKDLLNRWIVPLEKRIDFL
                     TLHTGGKFPVPFDCLLIISTNLEPSQLVEEAFMRRIHYKIMVEGPNPEQYAEIFTRCC
                     AERRIDFDQSAVDHIYRKWYGRHGIHPRACHPRDILDHLVDIARFYEGRPELNFDMVD
                     RACRSYFLDDSRKE"
BASE COUNT          307 a          665 c          714 g          317 t
ORIGIN      
        1 gttcgccact gtcggtcgtg aaaccacacg agggacactg tcgcatggtg ttcggcctta
       61 cggtgctctg cggctgcggc ggcgctccgg gcccgtcgcc gccggctctt ccgcctgctc
      121 ggacgcgggc tgcagtgtgt cgccctggtc catctggagc gtgtccagca gctcctcccg
      181 ctcgccgccg gcgctccggt cggccagcgt gaacgtgccc aggcctcggc tgtccacgcc
      241 gagcccggcg cgagtgtttc cggactgatc ggcgaacacc aggttggaag agccgtcggg
      301 ggacaccccc agcacggcgc gagggatccc cgcgggatcg gtgagggcca ggttggtcgt
      361 gtagtcgggg agcaggccga acacggccag cttccggtcg gagctgtcgg cgaacgagag
      421 cccggcggag ccgtcctcga gcaggctgag ccggactcgc tggcgctcgt tggggtcgct
      481 cagcaccaga cggaccgcac cgtcatcccc cagccccagc gctccgcgga ccttgccgtt
      541 ggcatcgcgc agcacgaact gccgggcggc cacggtctga ggagagccgg ggagcccgga
      601 tcgcgaggag taccagatca gggaggcacc gagaccgagg accatggcga tgaccacgag
      661 catcgcggtg acgtagcggc ggagccggcg gttgtcccgc tcgagctggt ccagccgatt
      721 gacgatcctt ccctccgccc ggagctcctg gggcgtcggg ggctcgtgcc ggtcgtcgat
      781 gatcactctt tcctcgaatc gtccaggaag taggagcggc aggcccggtc caccatgtcg
      841 aagttgagct ccggccgccc ctcgtagaag cgagcgatgt ccaccaggtg gtcgagaatg
      901 tcccgcgggt ggcaggcgcg ggggtggatg ccgtgccggc cgtaccactt gcggtaaatg
      961 tgatccaccg ccgactggtc gaaatcgatc cgccgctcgg cgcagcagcg ggtgaagatc
     1021 tcggcatact gctcgggatt ggggccctcg accatgatct tgtagtggat ccggcgcatg
     1081 aaggcctcct cgaccagctg cgacggctcg aggttggtcg agatgatcag gaggcagtcg
     1141 aaggggaccg ggaacttccc cccggtatgg agcgtgagga agtcgatccg cttctccagg
     1201 ggcacgatcc accggttgag caggtccttg ggcggcaccc gctggcggcc gaagtcgtcg
     1261 aggatgagca cgccgccgtt cgccttcagc tggaacgggg cctggtacat cttggtgtgg
     1321 tggtcgtact gcaggtcgag ctggtccagg gtcagctcac ccccggtgag cacgatcggc
     1381 cggcggacct tcacgtagcg caggtcgtgg gtcggcggcg ccttgagcca gccgccctcc
     1441 acctcgccct cctccagcgg gttcaacccg ctctcggcgt ggtggtacac cgggtcgtac
     1501 agaatcatca tctgcccctc gacctccacc gcgaacggca cgaagatgtc gccgccgagc
     1561 aggtgggaga tcgtttccgc gatcatggtc ttgccattgc cgggcgcgcc atagaggaag
     1621 agcgacttcg cggagttgat cgagggtccc agcacgtcgt gcaccgcctc cgacagcacc
     1681 atgccgcgga agccctcgcg caccacctcg cgggtcacgt gcacgttccg gatggtctgc
     1741 ttctcgaccc aggtccggta ctgcaccagc ggcaccggcg cggggccgac gtactggctg
     1801 gacgacaggg cctcgcgggc ccgctcccgg ccggccccgg tgagatcgaa gaggtaggca
     1861 ccccggttgg ggccgctggt gccgaggacc tccaccagac ggcgctgctg gagcgtgagc
     1921 aggcgatcgt ccacgaaggc gaacggcagc cggacggacg cggtgagctg gcggccgctg
     1981 cgggcgccct ggacgtagag cgt
//
LOCUS       DASUYN010000498         3925 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_598916, whole genome shotgun sequence.
ACCESSION   DASUYN010000498 DASUYN010000000
VERSION     DASUYN010000498.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3925)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3925)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3925
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_598916"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            114..830
                     /locus_tag="VF061_09670"
     CDS             114..830
                     /locus_tag="VF061_09670"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012360.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0120225 - coenzyme A binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEX6669816.1"
                     /translation="MSELQPSDLAPGLLLGRGVEIGSDIQIGGNVVIHAGTRIGDGCV
                     IQDSAVIGKAPKLGSHSTASAESPPPASIAGGAAVCAGAVVLAGAEIGAGAVIGDQAQ
                     VRERARIGAESVVGRGTAVDNDVTIGERVKVQSNCYITAGAVVEDEVFVGPGATLTND
                     HTMGRHPRGEPPDAPILRRACRVGGGVVICPGVEVGEESFVGAGAVVTEDVTARAVVV
                     GVPARQIREVGDRDLLERWL"
     gene            complement(885..1985)
                     /locus_tag="VF061_09675"
     CDS             complement(885..1985)
                     /locus_tag="VF061_09675"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013227.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HEX6669817.1"
                     /translation="MPLFASRATLEPLLPEIADRQRKVLESGRYILGPEVDAFESEFA
                     SYLGVEHCVGVANGTDALAIALRALGVGPGDEVIVPAFTFFATVEPVVTIGATPVFCD
                     ADEETWCVTAATAEPVLTERTRALLPVHLFGNPAPVGELIELAATRGIKVLEDAAQAH
                     GARLEGRMAGALGDAATFSFFPSKNLGGFGDGGAVVTDDPEVEALARRLRFHGSEDKR
                     LHTETGYNSRLDEIQAASLRALLPHLEEWTAARRRVAREYRDAGLGEAVAIQRETVGG
                     ESCYHVFAVATPERERLQQTLSEAGIGSRPYYEVPLYRQPALERWAPAEPLPATERIC
                     AEILALPMGTAMPEGAVETVVGAIKASLPAKA"
     gene            2061..2870
                     /locus_tag="VF061_09680"
     CDS             2061..2870
                     /locus_tag="VF061_09680"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX6669818.1"
                     /translation="MQGNRTDAPRVSVLIGCWNNAETLPRAIDSILSQTVEDLELIVV
                     DDGSSDETPELVRAVSDSRVRYLPLEHMGIPSSLNRGLAEASSPVVAVQDADDWSLPE
                     RLERELAVLDSWPEVAVVGCRMREVGPDGEQLRPRTAFAAGKVNRALMRFNPIPNSCA
                     AFRRQAALAVGGYDPRYRYAMDHDLWLRIADRHVVFALDEVLAVRRMWESNVAANRER
                     AQIRETLEIRAATLRRRRTLAGASGLVLPAASFLTPLPLKRALRRRLGQAP"
     gene            complement(2867..>3925)
                     /locus_tag="VF061_09685"
     CDS             complement(2867..>3925)
                     /locus_tag="VF061_09685"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX6669819.1"
                     /translation="WGEEGPQTSFATIAVAPGSDLYTASGRRRIWPPVRFGIGVFLHL
                     LRHGRRYDAVHTASFPYFSLLGAALALRLNRSRARLIVDWHEIWSLAYWRSYLGPAGG
                     RIAFWIQGLCLRLPDRSFTFSRLAEARAVELGHRAPITRLTGEYAGDEEGRRRLLGSR
                     ASADRAPTVVAAGRQIPEKRVPAIPAAIAEASGDLPELGCVILGDGPEAEATRDAVRD
                     LGLESRVELQGRVSHAEVMRALADASCLVHPSRREGYGLVVVEAASLGTPAVVVEGPD
                     NAATELIEEGVNGFVAPDAQPGSIAKGIIDAVQGGEELRDTTLAWYERNRDALSIDSS
                     LAAVESSYEGAKSEGPAG"
BASE COUNT          558 a         1390 c         1415 g          562 t
ORIGIN      
        1 ggtgctggag gccttgcagg ggtcgctcca cgcgggtgga gctccgcagc ccataggtgc
       61 cccggtaggc agcggcgccg aggcgtgagg tccgcgtcga tccgcccggg gtggtgagcg
      121 agctccagcc ttccgatctg gcgcccgggc tgctgctcgg gcggggcgtg gagatcggat
      181 cggacatcca gatcggtggc aacgtggtga tccacgccgg cacccggatc ggcgatggat
      241 gcgtgatcca ggactcggcg gtgatcggca aggccccgaa gctgggcagc cactcgaccg
      301 cctccgcgga gtcgccgccg cccgcgtcga tcgccggggg cgccgctgtc tgcgcggggg
      361 cggtggtcct cgccggcgcg gagatcggcg cgggggcggt gatcggggac caggcacagg
      421 tacgagagcg agcgagaatc ggtgcggagt cggtggtggg gcgcggcacc gccgtcgaca
      481 acgacgtgac gatcggagaa cgcgtcaagg tgcagagcaa ctgctacatc accgcgggcg
      541 cggtggttga ggacgaggtc ttcgtcggtc ccggagcgac gctgacgaac gaccacacga
      601 tgggccgcca ccctcgcggc gagccgccgg acgctccgat tctccgccga gcatgccggg
      661 tgggtggggg cgtagtgatc tgccccgggg tggaggtcgg cgaggagagc ttcgtcggcg
      721 ccggagccgt ggtcaccgag gacgtcacgg cccgggccgt ggtcgtgggt gtgcccgcta
      781 gacagatccg ggaggtcggc gaccgggatc tcctcgaacg ctggctctga cagcttgcgg
      841 atctggccaa agtcgaggtg cggtcggctc tccgttgcga gcgcttacgc cttcgccgga
      901 agcgatgcct ttatggcgcc cacgaccgtt tcgactgcac cctctggcat cgcggtgccc
      961 atcggcaggg cgaggatctc ggcgcagatc cgctcggtgg cgggcagcgg ctcggccggc
     1021 gcccagcgct ctagggccgg ctggcgatag agcggaacct cgtagtaagg gcgggacccg
     1081 atcccggcct cgctcagggt ctgctgcagc cgctcccgct ccggcgtggc gaccgcgaac
     1141 acgtggtagc aggactcgcc gccgacggtt tcgcgctgaa tggccaccgc ctcgcccagg
     1201 cccgcgtccc tgtactcgcg tgcaacccgg cggcgagcgg cggtccactc ttccagatgg
     1261 gggagcagcg cccgcaggga ggccgcctgg atctcgtcga gccgcgagtt gtagccggtc
     1321 tcggtgtgga ggcgcttgtc ctcggagccg tggaagcgga ggcggcgggc gagggcctcg
     1381 acctcggggt cgtcggtgac caccgcgccg ccgtcgccga acccgcccag gttcttcgag
     1441 gggaagaagc tgaaggtcgc cgcgtccccg agcgctccag ccatccgccc ttcgagcctg
     1501 gcgccgtggg cctgagccgc gtcctcgagg accttgatcc cgcgcgtggc cgcgagctct
     1561 atcaactcgc cgaccggcgc cgggttcccg aacaggtgca ccggcagcag cgctctggtg
     1621 cgctcggtga gcaccggctc ggcggtcgcc gcggtcacac accaggtctc ctcgtccgcg
     1681 tcgcagaaca cgggggtggc gccgatcgtc accacgggct cgacggtggc gaagaaggtg
     1741 aatgccggga cgatcacctc gtcgcccggg ccgaccccga gcgcgcgcag ggcgatcgca
     1801 agcgcgtcgg ttccgttggc gacgcctacg cagtgctcga caccgaggta ggaggcgaat
     1861 tcggattcaa aggcgtctac ctcgggaccg aggatgtagc ggccgctctc tagcactttt
     1921 cgctggcgat cggcgatctc cggcaggagc ggctcgagcg tcgcgcgact ggcgaaaagc
     1981 ggcacgttca aggctgaggc aggttaacgg cgccgcgctt cggggttcga cggccccgac
     2041 cctggctacg atcccgccga atgcagggca accgcacgga cgcgccgcgc gtcagcgtcc
     2101 taatcggctg ttggaacaac gccgagacgc ttccccgggc gatcgactcg atcctgtccc
     2161 agacggtcga ggacctcgag ctgatcgtgg tggacgacgg ctcctccgac gagaccccgg
     2221 agctggtccg ggccgtctcg gactcgcgcg tccgctatct gccgctcgag cacatgggaa
     2281 tcccctcgag cctcaaccgg ggcctcgccg aggcctcgtc gccagtcgtg gcggtccagg
     2341 atgcggacga ttggtcgctg cccgagcggc tggagcggga gctggccgtc cttgactcct
     2401 ggccggaggt ggcggtggtc ggctgccgga tgcgggaggt gggacccgac ggggagcaac
     2461 tccgcccccg cactgcgttc gccgccggca aggtgaaccg agcgctgatg cgcttcaacc
     2521 cgatcccgaa ctcgtgcgcg gccttccggc gccaggccgc gctcgcggtc ggaggctatg
     2581 acccgcgcta ccgctacgcg atggaccacg acctctggct gcggatcgcc gatcgtcacg
     2641 tcgtcttcgc gctcgatgag gtgctcgctg tgcgccgaat gtgggaatcc aacgtcgccg
     2701 ccaatcgcga acgggcgcag atcagggaga cgctcgagat ccgcgccgcc accctgcggc
     2761 gccgccgcac ccttgccggc gcctccggcc tcgtcctgcc ggcggcttcc ttcctgacgc
     2821 cgcttccgct caagcgcgcc ctccggcggc gactgggaca ggccccctaa cccgccgggc
     2881 cctcggactt ggctccctca tacgacgact cgaccgccgc cagggagctg tctatcgaca
     2941 gcgcgtcgcg gttgcgctcg taccaggcga gcgtggtgtc acggagctcc tccccgcctt
     3001 ggaccgcgtc gatgatcccc ttcgcgatgc tccccggttg ggcgtccggc gcgacgaatc
     3061 cgttgactcc ctcctcgatc agctcggtcg ccgcgttgtc ggggccctcc accaccaccg
     3121 ccggcgtgcc gagggaggcg gcctcgacca ccacgagtcc gtagccctcg cgccgggacg
     3181 ggtgaacgag gcagctggcg tcggcgagcg cacgcatcac ctccgcatgg ctgacgcgcc
     3241 cctgcagctc caccctgctc tcgagcccga ggtcccggac cgcgtctcgg gtcgcttcgg
     3301 cctcgggccc gtcgccgagg atcacgcagc ccagctcggg aagatccccg ctcgcctcgg
     3361 cgatcgccgc cgggatcgcc gggacgcgct tctcggggat ctggcggccg gccgccacca
     3421 ccgtcggcgc acggtccgcg ctcgcccgcg aacccaggag gcgccgccgc ccctcctcgt
     3481 cgccggcgta ttcaccggtg agccgggtga tcggcgcccg gtggcccagc tcgacggctc
     3541 gtgcctcggc cagccgggag aaggtgaagc tgcggtccgg cagccgcagg caaagcccct
     3601 ggatccagaa cgcaatccgc ccacccgccg gaccgagata ggagcgccag tacgcgaggc
     3661 tccagatctc gtgccagtcg acgatcaggc gggcacggga acggttcagg cgcagggcga
     3721 gcgcggcgcc cagcagcgag aagtagggga acgaggccgt gtgcacggcg tcgtagcgcc
     3781 gaccatgacg gagcaggtgc agaaagaccc caatcccgaa gcgcaccggc ggccagatcc
     3841 gccgccgccc tgaggccgtg tagagatcgc tccccggcgc gaccgcgatg gtcgcaaagg
     3901 aggtctgcgg cccctcctcg cccca
//
LOCUS       DASUYN010000499         2284 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1923817, whole genome shotgun sequence.
ACCESSION   DASUYN010000499 DASUYN010000000
VERSION     DASUYN010000499.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2284)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2284)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2284
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1923817"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..837)
                     /locus_tag="VF061_09690"
     CDS             complement(<1..837)
                     /locus_tag="VF061_09690"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEX6669820.1"
                     /translation="MRKGGLLVGMAVGAGMSYLLDPECGARRRARLRTRIEEHLTGEE
                     PSARPLETPVRRYGSRRGDIAGLESATLGPGGGRAPGGRALALLGGALTLYGVTRRGP
                     LGFAARTLGAGMLWSELRHPTSPGAPAGRERRRTVDIQKTLFIDAPAARVYEFWTDYE
                     NFPLFMSNVREVRDLGGGRSHWVVRGPGGVPIEWNAVITEQVPGEILAWRSRPGSMLE
                     NAGTVRFRPEGSGTRVDLRLCYSPPAGGAGQAVAELLGADPRAKLNEDLGRLKSLLEG
                     IRR"
     gene            1010..1378
                     /locus_tag="VF061_09695"
                     /pseudo
     CDS             1010..1378
                     /locus_tag="VF061_09695"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
     gene            1380..1880
                     /locus_tag="VF061_09700"
     CDS             1380..1880
                     /locus_tag="VF061_09700"
                     /inference="COORDINATES: protein motif:HMM:NF013340.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
                     /protein_id="HEX6669821.1"
                     /translation="MTAPRDDSPTSGLVVSSAAFPEGAPLPVRHTCDGEDLSPPLRWT
                     GVPVGTRSFALVCDDPDAPRGTWVHWLLWNLPADAVELSEGVPRRPELPSGARQGIND
                     GGDIGYAGPCPPPGGPHRYFFRLHALDVLLNLSPGVNRSDLEAEMEGHVLGRAVTMGT
                     YERRKR"
     gene            1929..>2284
                     /locus_tag="VF061_09705"
     CDS             1929..>2284
                     /locus_tag="VF061_09705"
                     /inference="COORDINATES: protein motif:HMM:NF012309.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006801 - superoxide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase family protein"
                     /protein_id="HEX6669822.1"
                     /translation="MQEYRFAALMLAGSLAACGGGQPRGPGGSALETPTATASLFDSA
                     GTRVGVATFSDSGGAGHLAVSVTGLNPGRHGMHVHENGSCSGPDFQSAGGHFNPDGKK
                     HGIQNPEGPHAGDLPNL"
BASE COUNT          319 a          865 c          766 g          334 t
ORIGIN      
        1 cctcctgatg ccttcgagca gcgacttcag ccgcccgagg tcctcgttga gtttggcccg
       61 cgggtccgcc cccagcagct cggccaccgc ctggccggcg ccgccggcgg gcgggctgta
      121 gcacagacgg agatccaccc tggtaccgga cccttcggga cggaaacgca ccgtgccggc
      181 gttctccagc atcgagcccg gccggctgcg ccacgcgagg atctcgcccg gcacctgctc
      241 ggtgatcacc gcgttccatt cgatcggaac cccgccgggc ccccgcacga cccagtgcga
      301 ccggccgccg cccaggtcgc gcacctcgcg cacgttggac atgaacagcg gaaagttttc
      361 gtaatcggtc cagaactcgt acacccgggc ggccggcgcg tcgatgaaca gcgtcttctg
      421 gatatccacc gtgcggcgcc gctcccggcc ggccggcgcc cccggagacg tgggatggcg
      481 gagctcgctc cagagcatgc cggcgcccag ggtgcgcgcc gcgaatccca ggggaccccg
      541 acgggtgact ccgtagagcg tcagcgcccc gcccagcagg gcgagtgccc ggccaccggg
      601 tgcccggccc ccgccggggc ccagggtggc ggactccagg cccgcgatat cgcctcggcg
      661 ggacccgtac cgtcgtaccg gtgtctccag cggccgagcc gagggctcct cacccgtgag
      721 atgttcctcg atccgggtgc gcagccgggc cctgcgccgc gcaccgcact ccgggtcgag
      781 gaggtaggac atccccgccc cgaccgccat gccgaccaac agcccgcctt ttcgcatgct
      841 cgactcccgt ggttggcccg cggccgtggt ccggccggaa gcggaaatgc tgcggttttg
      901 tcgccttgcg tcggtgagcc cgctcacacg cctgcgcctg cgcggcactg ggcaaccgct
      961 tgaccgaggc tagctttcgc gaggacgcgc ccctacttcc cggagtccgc tcatggtgct
     1021 cacgtacgtg gcgatcggtg tggtggcagg aatcctgtcg ggtctcttcg gcgtcggcgg
     1081 cggcatcctc atcgtgccgg cactgatcgt cctcgcccac ttccatctca agctcgccct
     1141 cggcacttcc ctcggcgcgc tcgtactgcc ggtagggctc ctcggggtgt acacctacca
     1201 ccagaacggg aatctggact ggcgcgccgc gctgctgatc ggcctcggcc tcttcttcgg
     1261 tgcctgggcc ggggcgcgcc ttgcccacac catccctgcc gccacactcc agcggatgtt
     1321 cgcggtgttc atgatgatcg ccgcggcccg gctgtggctc aaggccggag ggcaatgaga
     1381 tgacggcacc ccgtgacgat tccccgacct ccggcctggt cgtgagcagc gcggcgttcc
     1441 ccgaaggggc gcccctgccg gtccggcaca cctgcgacgg ggaggacctc tcgccgcctc
     1501 tccggtggac gggagtgccg gtcggcaccc gcagcttcgc gctcgtctgc gacgacccgg
     1561 atgcgccccg cggcacctgg gtccactggc tgctctggaa cctgccggcc gacgccgtcg
     1621 agctgagcga gggcgtgccg cggcgcccgg agctgccgtc gggggcacga caggggatca
     1681 acgacggcgg ggacatcgga tacgcgggcc cctgcccgcc acccggcggt ccccaccgct
     1741 atttcttccg gctccacgcc ctcgacgtcc tgctcaatct ttcgcccggc gtgaatcgct
     1801 ccgatctcga ggcggaaatg gagggacacg tcctggggcg ggcggtcacc atgggaacct
     1861 acgagcggcg gaagcgctag ccgacctcgc tcaacatcga cgtcgcctga ccaacaggag
     1921 atcgacacat gcaagagtac cgcttcgccg ccctgatgct cgccggcagc ctcgccgcct
     1981 gcggcggcgg ccagccgcgc gggccgggcg gcagcgcgct ggagacgccc accgccacgg
     2041 cgagcctctt cgattccgcg gggacccggg tcggggtggc cacgttctcc gactccggtg
     2101 gagccggcca cctggccgtg agcgtcaccg gcctgaatcc gggaagacac ggcatgcacg
     2161 tccacgagaa cggcagctgc agcgggcccg acttccagtc ggccggcgga cacttcaatc
     2221 cggacggcaa gaagcacggg atccagaatc ccgagggccc gcacgcgggc gacctgccga
     2281 acct
//
LOCUS       DASUYN010000500         2171 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1042773, whole genome shotgun sequence.
ACCESSION   DASUYN010000500 DASUYN010000000
VERSION     DASUYN010000500.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2171)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2171)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2171
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1042773"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..466
                     /locus_tag="VF061_09710"
     CDS             <1..466
                     /locus_tag="VF061_09710"
                     /inference="COORDINATES: protein motif:HMM:NF015686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669823.1"
                     /translation="LFRSPVVRLARRLLPFTNYYDGTKFFTRRMDGAVLATPMLLVLI
                     IVEWSDLVFAIDSIPAIFAITRDPFLVYSSNVFAILGLRALFFVLAGMMDKFVYLKPG
                     VGIILVFVGLKMTLSHWVHLPTLLSLGVIVVTLAAAVLLSLRRSARDARQPA"
     gene            complement(399..>2171)
                     /locus_tag="VF061_09715"
     CDS             complement(399..>2171)
                     /locus_tag="VF061_09715"
                     /inference="COORDINATES: protein motif:HMM:NF015649.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX6669824.1"
                     /translation="LSHSNLGASMFSPIALALVGSLALPGARLDPQAGAAPRSDSTFV
                     RQWRDDLAYLARELPRRHKSLFHTMRREQFDSALAVLDRKLPGLARHQVIVELARIVA
                     LAGDGHTNVAPTRDPKIGFHTYPVKLYFFKDGLFVRSAAKAQADLVGAKVIRLGRLTA
                     DQAYFAVRELIGRDNEMNARFFAPFLLAMPEVLHAIGAIDEPEAVPLLLEQAGARTVA
                     VLRPSGLAAMMPSDTDVSWMPEDGWVDMRGAPGPRTPAWLRGDPRTPLRLEYLPESRT
                     AYVQYNKVGDAPGETIAGFAERLRAFVDSAAVDRVVLDLRLNRGGDGTLNQPLLLSLI
                     RSPKLEGPGRLFIVIGRSTFSAAQFLVHDLEEYTDAVFVGEPTAGKPNSYGDSRRITL
                     PHSGVTVRASIFYWQQGHPLDTRPWKGPEIAAELTSRDYRANVDPAMREILAWKPAPS
                     LAERMRDAFAAGDSTGALRLHLEYKTDPRHAYIDTELELNALGYELLRQGRHGAAIAV
                     LQLNTADHPGSSNAFDSLGEAYLEAGRREEAIQSYERALALQPGNENARQMLEKLRGG
                     PAATPAGARPARSGAGTGAPLPRG"
BASE COUNT          307 a          749 c          774 g          341 t
ORIGIN      
        1 gctcttccga tctcccgtgg tccgcctggc gcggcggctg ctgcccttca ccaactacta
       61 cgacggcacc aagttcttca cccgtcggat ggacggcgcg gtgctcgcca ccccgatgct
      121 gctggtgctg atcatcgtgg agtggtccga cctggtgttc gccatcgaca gcatcccggc
      181 gatcttcgcg atcacccggg atcccttcct ggtctacagc tccaacgtct tcgccatcct
      241 cggcctccgg gccctgttct tcgtgctcgc ggggatgatg gacaagttcg tgtacctcaa
      301 gcccggcgtc ggcatcatcc tcgtcttcgt cggcctcaag atgacgctga gccactgggt
      361 gcacctcccc accctgctct cgctcggcgt catcgtggtc accctcgcgg cagcggtgct
      421 cctgtccctg cgccggagcg cgcgggacgc gcgccagccg gcgtagcggc gggtccaccc
      481 cggagcttct ccagcatctg ccgggcgttc tcgttgccgg gctgcagcgc gagggcccgc
      541 tcgtagctct ggatcgcctc ctcccggcgt cccgcctcca ggtacgcctc acccaggctg
      601 tcgaacgcgt tggaggagcc cgggtggtcc gccgtgttca gctggagcac ggcgatggcc
      661 gcgccgtgcc gcccctgccg gagcagctcg tagccgagcg cgttgagctc cagctcggtg
      721 tcgatgtagg cgtgccgcgg atcggtcttg tactccaggt ggagccgcag ggcgccggtc
      781 gagtcaccgg cggcgaaggc gtcacgcatc cgctcggcga gggagggcgc cggcttccag
      841 gcgaggatct cgcgcatggc ggggtccacg ttggcgcggt agtcgcggga ggtgagctcc
      901 gcggcgatct ccggcccctt ccacggacgc gtgtccaacg ggtggccctg ctgccagtag
      961 aagatggacg cccgcacggt gacgccgctg tggggcaggg tgatccgcct ggaatccccg
     1021 taggagttcg gcttgccggc ggtcggctcc ccgacgaaga cggcatcggt gtactcctcg
     1081 agatcgtgca ccaggaactg ggcggcggag aaggtactcc ggccgatcac gatgaacagg
     1141 cggcccggcc cctccagctt cggcgagcgg atgaggctca gcagcagcgg ctggttgagg
     1201 gtgccgtcgc cgccacggtt cagccggaga tcgagcacca cgcggtccac ggcggccgaa
     1261 tccacgaacg cccgcaggcg ctccgcgaac ccggcgatgg tctcccccgg tgcgtccccc
     1321 accttgttgt actggacgta ggcggtgcgg ctctcgggca ggtactcgag ccgcagcggg
     1381 gtgcgcggat cgccccgcag ccacgccggc gtccggggcc cgggcgcccc gcgcatgtcc
     1441 acccagccgt cctccggcat ccagctcacg tcggtgtcgg acggcatcat cgcggcgagg
     1501 cccgaggggc ggagcaccgc gacggtgcgg gcgccggcct gctccagcag cagcggcacg
     1561 gcctccggct cgtcgatcgc accgatggca tggagcactt cgggcatggc cagcagaaac
     1621 ggcgcgaaga agcgggcgtt catctcgttg tcgcgcccga tcagctcccg cacggcgaaa
     1681 taggcctggt cggcggtgag ccgcccgagg cggatcacct tcgcaccgac cagatcggcc
     1741 tgggccttcg ccgcgctgcg gacgaacagc ccgtccttga agaagtagag cttcaccgga
     1801 taggtgtgga agccgatctt cgggtcgcga gtcggcgcga cgttggtgtg cccgtcgccc
     1861 gccagggcga cgatccgggc cagctccacg atcacctgat ggcgggcgag gcccgggagc
     1921 ttgcggtcga gcacggcgag cgcgctgtcg aactgctcgc ggcgcatggt gtggaagagg
     1981 ctcttgtgcc gtcgggggag ctcgcgcgcc agataggcga gatcgtcacg ccactggcgg
     2041 acgaaggtgg aatcggagcg aggggcggca ccggcctggg ggtcgaggcg cgcgcccgga
     2101 agcgcgaggg aaccgaccag ggccagagcg atcggtgaga acatggacgc acccagattc
     2161 gagtggctga g
//
LOCUS       DASUYN010000501         8219 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1483961, whole genome shotgun sequence.
ACCESSION   DASUYN010000501 DASUYN010000000
VERSION     DASUYN010000501.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8219)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8219)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8219
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1483961"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..424)
                     /gene="msrB"
                     /locus_tag="VF061_09720"
     CDS             complement(<1..424)
                     /gene="msrB"
                     /locus_tag="VF061_09720"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HEX6669825.1"
                     /translation="MTHRNKPEDDELRRRLTPLQYEVTQHEGTEAPFRNEYWDHKEPG
                     IYVDVVSGEPLFSSLDKYDSGTGWPSFTRPLESASVTTREDRSLLMPRTEVRSCEADS
                     HLGHVFDDGPAPTGLRYCMNSAALRFVPLDRLEAEGYGR"
     gene            complement(441..953)
                     /locus_tag="VF061_09725"
     CDS             complement(441..953)
                     /locus_tag="VF061_09725"
                     /inference="COORDINATES: protein motif:HMM:NF018925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1440 domain-containing protein"
                     /protein_id="HEX6669826.1"
                     /translation="MARRTRARHGVGRDLLKGAIAGAVATYVMGKVTAYMYEHEDREA
                     RWAEDEARGGRTAYEVAAEKAAGAAGTSLEPRQREELGSAIHWALGIGAGAAYALFRR
                     RVQVLGGAAGTAFGTAFWAFLDEGLVPGLGLTPGPTAFPWQAHARGLVGHLTFGTVTD
                     GTLRLLDRFA"
     gene            complement(1017..2060)
                     /gene="ugpC"
                     /locus_tag="VF061_09730"
     CDS             complement(1017..2060)
                     /gene="ugpC"
                     /locus_tag="VF061_09730"
                     /inference="COORDINATES: protein motif:HMM:NF008653.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter
                     ATP-binding protein UgpC"
                     /protein_id="HEX6669827.1"
                     /translation="MASVHLQKVWKKYPNGHVAARGVDLAVEDGEFMVLVGPSGCGKS
                     TALRMVAGLETPTEGKVLIGDRDVTEVPPQERDVAMVFQSYALYPHMTVRDNLGFGLR
                     MRGTPAARIVERVEVAARALGLGAVLDRKPGQLSGGQRQRVALGRAIVREPKVFLFDE
                     PLSNLDAKLRLETRAELARLHRRLAATMVYVTHDQEEALTLGTRVAVMNEGRVEQVGP
                     PLEVYRRPETLFVATFVGSPAMNLLSADLLPGVRAGGSAGVDGATLGVRPHDLSVVAA
                     GAGDTDALVDVVEPRGSELLLYLRLGASGEGQEVRVITPPDLDVAPERVVGLRFDRGR
                     LHFFDQASGRRVG"
     gene            complement(2064..2882)
                     /locus_tag="VF061_09735"
     CDS             complement(2064..2882)
                     /locus_tag="VF061_09735"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX6669828.1"
                     /translation="MREQGRLATLVIAALVLAVAFPFFRAVAGSLTPEAQLFGGAPLW
                     PDPPVLDHYRALFTEREFWLPIRNSLIVAAATTLFCVTLGSLCAYALARLRFRGKALL
                     LGAILAVSMFPQIAVVSPLFLLLRSVRLIDTYPGLVLPYLTFAMPLTVWLLVGYFRQL
                     PAELEEAAMVDGASRLRAFREVIVPLALPGLAATAILTFVYSWNEFLFALSFTLGPER
                     QTVPVAIALFRGQYQVPWGQVLAAAIVATAPVAVLVLVFQRRIVQGLTAGAVKG"
     gene            complement(2879..3742)
                     /locus_tag="VF061_09740"
     CDS             complement(2879..3742)
                     /locus_tag="VF061_09740"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX6669829.1"
                     /translation="MPRTEPRGAERSEARLAWWMVAPAVLTILLVALFPLSWTIWESL
                     HLHDLRMPWLGRPFVGLGNYLEVLQDRRFWGAMGHTVWFAAASVSLELLVGCVLALAM
                     NRTFRGRTLVRLAILIPWAIPTVVAALVWRFMFEGLEGWLAHDTKAWVPIILADAWKE
                     TPFVALLLLAGLQGIDPALYEAARIDGASAWRQFRYVTLPLLAPAIMVALIFRTMNAF
                     RVFDLIYVLTGGGPGTATEPISLYTFNSLMHNLRFGYGSTLSVLVFLVTFLLALGYIR
                     LLGRGLTETRP"
     gene            complement(3729..4919)
                     /locus_tag="VF061_09745"
     CDS             complement(3729..4919)
                     /locus_tag="VF061_09745"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX6669830.1"
                     /translation="MTVSGSVLGAEGLILRRQLERFDNEHPEIRVEMRPTPDAADLRH
                     QLYVQWLNARATDPDILQVDAIWTPEFAAAGWILPLDRYASDTADFFPVTIDANRWQG
                     ELFAMPWFVDVGMLYWRTDLFDAAPTTWDELERHTRDVTADGTPRYGLVWQGARYEGL
                     VTVFLEYLGGFGGKILDGGRVTVADEPGVRALTRMRDQIHRLGVVPGRVLTWHEEEPR
                     FAFQNGEAALMRNWPYAAGPMQDSTESSVAGRFAVAPMPAGPGGRPTAAFGGAQLAIN
                     AFSPEVEAAWLVIEYLTRPEQMLERAQVVGQFPTRTSVFDDPALADALQIPPGQAREI
                     IEAAVPRPVTPVYTQLSEILQIQIHRALSRQVEPRAALARAAAEMQELLDRVGLGRGA
                     VAAH"
     gene            5127..5747
                     /locus_tag="VF061_09750"
     CDS             5127..5747
                     /locus_tag="VF061_09750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669831.1"
                     /translation="MPRRVESTRVFLLSPAHLGGKRATLLLREEARFPLAVRLRRPEG
                     VALGEAFSFLSGLYFRGKLAYATRFARPPTGVAGVQVITASRGLVAADTPVSPDILRA
                     FGSVDIRADDPRYRGPLLRDIAHLAGHPDLELVLLGSVATGKYVDVLLDVVGERLLFP
                     TEFAGRGDMSRGALLLRSAREGRELAYEPVAGALGRLRQRTRGGVR"
     gene            5744..5884
                     /locus_tag="VF061_09755"
     CDS             5744..5884
                     /locus_tag="VF061_09755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669832.1"
                     /translation="MTATARRAAVAVRIPSDGTEMRETAIVVRDALRELGMKPPVEVD
                     PL"
     gene            6016..6369
                     /locus_tag="VF061_09760"
     CDS             6016..6369
                     /locus_tag="VF061_09760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669833.1"
                     /translation="MAFDKTWDQEDAWWRENYGGRPYATGRNYEEFRPAYRYGYESGR
                     HHMGRSWNEVEADLRTGWDKYEGRGTSTESAWEKVKDAVRDAWHRVTGQSDVDASRMS
                     ESEVDRLSHGGRPRQ"
     gene            complement(6464..>8219)
                     /locus_tag="VF061_09765"
     CDS             complement(6464..>8219)
                     /locus_tag="VF061_09765"
                     /inference="COORDINATES: protein motif:HMM:NF024907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="VCBS repeat-containing protein"
                     /protein_id="HEX6669834.1"
                     /translation="PEPEAGAPRYHAVVAPFPVMDTAGRLLQLPFHGGFNAPRPQLLD
                     ADGDGDLDLFLQEVTGGVALFERDGERDGLPRFLPRSSRYGDIDVGEWYRFADVDGDG
                     DLDLLAEQRFSYIKYYRNDGRRGEYRFVLAADTLKDVDGAPIFSDRQNIPQLGDLDCN
                     GRSDLLIGRLDGTVARYEAVAPVPRGVPAFRLVASEFEGIRIIGQQVGPPLLGPSMHG
                     ANTMALADHDGDEDLDLFWGDFFEPGLLLIPNGGTCPAPDFRHPPVQFPVGRPLLTSG
                     YNAPAFGDLSGDGRADLVVGVLGGAYNPLRTSAENLFYLTRGTGGWEVRTRRLLPVLD
                     IGAEAVPALADLDGDGDLDLLLSNKLDPSDLQTSFVYRLENVGSPERPAFRMRVPLEL
                     GRRFHAAPAFADLDGDGRLDALIGQWGPRLAWYRGTERGFEPADTALVTITRGSNTVP
                     ALGDLDGDGDLDLIVGESSGWLNYYRNDGSPSGPRFVLLSDEFERIQIGRRSAPALAD
                     LDGDGDLDLLVGSENDGLALFRNDGSPVAPAFVRDTAFRAEVPVLATPAAGDLDGDGQ
                     AELIVGGAGGGAVYLERR"
BASE COUNT         1320 a         2878 c         2909 g         1112 t
ORIGIN      
        1 accgaccgta cccttcggcc tccaggcgat ccagcggaac gaaccggagc gcggcggagt
       61 tcatgcagta ccggagcccc gtcggcgcag gcccgtcgtc gaacacgtga ccgaggtggg
      121 agtcggcctc gcacgagcgc acctcggtgc ggggcatgag gagggagcgg tcctcccggg
      181 tggtcacgct ggccgactcc agcggccggg tgaagctggg ccagcccgtc ccggagtcgt
      241 acttgtcgag cgagctgaag agcggctcgc cggagaccac gtccacgtag atgccgggct
      301 ccttgtggtc ccagtactcg ttgcggaacg gcgcctcggt gccctcgtgc tgcgtcacct
      361 cgtactgcag cggcgtcagt ctccgccgca gctcgtcgtc ttccggcttg ttgcggtgcg
      421 tcatccgaat gttctccggc tcaggcaaac cggtcgagca ggcggagcgt cccgtccgtg
      481 accgtgccga acgtcaggtg gcccacgagg ccccgggcgt gggcctgcca gggaaaagcg
      541 gtgggccccg gcgtgaggcc gagccccggg accaggccct catccagaaa ggcccagaac
      601 gcggtcccga aggcggtgcc ggcggcgccg ccgagcacct ggacccggcg ccggaacagg
      661 gcgtaggcgg caccggcccc gatgcccaga gcccagtgga tcgcggagcc gagctcctct
      721 cgctgccggg gctcgaggct ggtgccggcc gcgccggccg ccttctccgc ggcgacctcg
      781 taggcggtgc ggccgcctcg cgcttcgtcc tccgcccagc gcgcttcgcg gtcctcgtgc
      841 tcgtacatgt aggccgtcac cttgcccatc acgtaggtgg cgaccgcgcc ggcgatggcg
      901 cccttcagca ggtcccggcc cacgccatgc cgggcccgag tgcgtctggc catggtaccc
      961 tctctctgga tgctcactcg tcgtgggatg acatcccgcc tcgggatgcc agccctttac
     1021 ccgacccgcc ggccgctcgc ctggtcgaag aagtgtagcc gcccccgatc gaatcggagg
     1081 ccgaccacgc gctccggcgc gacatcgaga tcggggggag tgatgacccg gacttcctgg
     1141 ccctcacccg acgcgcccag gcggaggtag aggagaagct cgctccctcg gggctcgacc
     1201 acgtccacca gcgcatcggt gtcgcccgcg ccggcggcca cgaccgaaag atcgtgcggc
     1261 cggacgccca gcgtggcccc gtccactccc gctgaccccc cagctcggac gccaggcagc
     1321 agatcggccg acagcagatt catcgccggc gagccgacga aggtggccac gaagagcgtc
     1381 tccggccggc ggtagacctc gagcggcggc cccacctgct ccacccggcc ctcgttcatg
     1441 accgccaccc gggtgccgag cgtcagcgcc tcctcctggt cgtgggtgac gtagaccatg
     1501 gtcgcggcca gccgccggtg cagccgggcc agctccgccc gggtctccag ccggagcttg
     1561 gcgtcgaggt tggagagcgg ctcgtcgaag aggaacacct tcggctcccg gacgatcgcc
     1621 cggccgaggg cgacccgctg ccgctggccg ccggagagct ggcccggctt gcggtcgagc
     1681 accgcgccga gccccagcgc cctggcggcg acctccaccc gctccacgat ccgcgcggcg
     1741 ggcgttcccc gcatccggag cccgaagccc aggttgtcac gcacggtcat gtgcgggtag
     1801 agcgcgtagc tctggaagac catggccacg tcgcgctcct ggggcgggac ctcggtgacg
     1861 tcgcggtcgc cgatcagcac cttgccctcg gtcggcgtct ccagcccggc gaccatgcga
     1921 agggccgtgc tcttgccgca gcccgagggg cccaccagca ccatgaactc cccgtcctcg
     1981 accgcgaggt ccaccccgcg cgcggccacg tgcccgttgg gatatttctt ccagaccttc
     2041 tgcagatgca cggaggccat cgctcagcct ttcaccgcgc cggccgtgag tccctgcacg
     2101 atgcgacgct ggaacaccag gacgagcacc gccaccggcg ccgtggccac gatcgcagcc
     2161 gcgagcacct ggccccaggg gacctggtac tgcccacgga agagtgcgat ggccaccggt
     2221 accgtctgac gctcgggccc gagcgtgaac gagagagcga agagaaactc gttccagctg
     2281 tacacgaagg tgaggatggc ggtggcggcg aggccgggca aggccagcgg cacgatgacc
     2341 tcacggaagg cgcggagccg gctggcgccg tccaccatcg ccgcctcctc cagctccgcc
     2401 gggagctggc ggaaatagcc caccaggagc cagacggtga gcggcatggc gaaggtgaga
     2461 tacggcagga ccaggcccgg gtaggtgtcg atcagccgca cgctccggag caggaggaag
     2521 agcggcgaca ccacggcgat ctggggaaac atgctgaccg cgaggatcgc gcccagcagg
     2581 agggccttgc cccggaaccg caggcgcgcc agcgcatagg cgcagaggga gcccagggtg
     2641 acgcagaaca gcgtcgtggc ggccgcgacg atgagggagt tccggatcgg cagccagaac
     2701 tcgcgctcgg tgaagagcgc ccggtagtgg tcgagcaccg gagggtcggg ccagagcggg
     2761 gcgccgccga agagctgcgc ctccggcgtg agggagccgg ccacggcgcg gaagaaggga
     2821 aaggccaccg cgagcaccag cgccgcgatc acgagggtgg ccagccggcc ctgctccctc
     2881 acggacgggt ctccgtgagc ccgcggccga gcagccggat gtagcccagg gcgagaagga
     2941 aggtgacgag gaagaccagt accgagagcg tcgagccgta gccgaagcga aggttgtgca
     3001 tcagggaatt gaaggtatag agcgagatcg gctccgtcgc cgtgcccggc ccaccgccgg
     3061 tgaggacata gatcaggtcg aacacccgga aggcgttcat ggtgcgaaag atcagggcca
     3121 ccatgatggc cggggcgagc aacggcagcg tcacgtagcg gaactgccgc caggccgagg
     3181 cgccgtcgat cctggccgcc tcgtagagcg cggggtcgat gccctggagc ccggccagga
     3241 ggaggagcgc cacgaacggc gtctccttcc acgcgtcggc caggatgatg ggcacccacg
     3301 ccttggtgtc gtgcgccagc cagccctcga gcccttcgaa catgaagcgc cagaccaggg
     3361 cagccacgac cgtggggatg gcccagggaa tcaggatcgc gagtcgcacc agcgtccgac
     3421 cgcggaaggt gcggttcatg gccagcgcca gcacgcaacc gaccaggagc tccagactga
     3481 cactcgcggc ggcgaaccag accgtgtgcc ccatcgcgcc ccagaagcgc cggtcctgca
     3541 gcacctccag gtagttcccc agcccgacga atggacgccc cagccagggc atccggagat
     3601 cgtggaggtg gagcgactcc cagatggtcc agctcagcgg gaagagggcg acgagcagga
     3661 tggtgagcac ggccggcgcc accatccacc aggcgaggcg ggcctcgctc cgctcggcgc
     3721 cgcgcggctc agtgcgcggc aacggcgcct ctgcccaggc cgacgcggtc gagcagctcc
     3781 tgcatctcgg ctgccgcgcg ggccagcgcg gcccgaggct cgacctgccg gctcagggcg
     3841 cggtggatct ggatctgcag gatctcggag agttgggtgt acaccggcgt gaccgggcgc
     3901 ggcaccgcgg cctcgatgat ctcgcgcgcc tgcccgggcg ggatctggag cgcgtccgcc
     3961 agcgcgggat cgtcgaacac cgaggtgcgg gtgggaaact ggcccacgac ctgggcccgc
     4021 tccagcatct gctcggggcg ggtgaggtac tcgatcacca gccacgccgc ctcgacctca
     4081 ggactgaacg cattgatcgc gagctgcgcg ccgccgaacg cggctgtcgg ccgaccgccc
     4141 ggacccgcgg gcatcggcgc caccgcgaac cggccggcga cgctcgactc ggtgctgtcc
     4201 tgcatcgggc ccgcggcata gggccagttc cgcatcagcg ccgcctcgcc gttctggaac
     4261 gcgaagcgcg gctcctcctc gtgccaggtc agcacccgcc ccgggacgac gccgaggcga
     4321 tggatctggt cgcgcatcct ggtgagggcc cggacccccg gctcatcggc cacggtcacg
     4381 cgacctccgt ccagtatctt gccgccgaat cccccgaggt actccaggaa tacggtcacc
     4441 agcccctcgt agcgcgctcc ctgccagacg agcccgtagc gtggcgtccc gtcggcggtg
     4501 acgtcgcggg tgtgccgctc cagctcgtcc caggtggtgg gggccgcatc gaagaggtcg
     4561 gtccgccagt agagcatgcc cacgtccacg aaccagggca tcgcgaaaag ctcgccctgc
     4621 cagcggttgg cgtcgatggt cacgggaaag aagtcggccg tgtccgaggc atagcggtcg
     4681 agcggaagaa tccagcctgc tgcggcgaac tcgggtgtcc agatcgcgtc cacctgcagg
     4741 atgtccgggt cggtggctcg cgcattgagc cactggacgt agagctggtg gcgaaggtcg
     4801 gccgcgtcgg gcgtgggccg catctccacc cggatctccg gatgctcatt gtcgaatcgt
     4861 tccagctgcc ggcgcaggat caggccctcg gcgcccagca cgctgccgga gaccgtcacg
     4921 gtggtcggcc ccccggtcgg ctccggccca caccccatcc cacacgacag tgcgagtcct
     4981 gtggcgatcc agcgtcgcgg tctgcggtcc acggtctgtt cctccccgtc gccagccacg
     5041 gtaacctgcg gcgggaggtc acgccagcat gccctgaggt gacccaaggc acggcctcgg
     5101 caccggcgtg cccgcagcgt agcaccatgc cccgcagagt cgagtcgacc cgggtgttcc
     5161 tgctctcacc ggcacacctc ggtggcaagc gcgcgacgct tctcctgcgg gaggaggccc
     5221 gattccccct ggccgtccgg ctccgcagac cggagggcgt cgcgttgggc gaggcgttca
     5281 gcttcctgag cggcctctat tttcgcggga agctggccta tgcgacccgc ttcgcccggc
     5341 cgcccaccgg ggtggccggc gttcaggtca tcacggccag tcgcggcctg gtagcggcgg
     5401 acacgccggt gagccctgac atactgcggg ccttcggctc cgtggacatc cgggcggacg
     5461 atccccgata ccggggcccc ttgctgcggg acatcgctca tctcgcggga caccccgacc
     5521 tcgagctggt gctgctcggc agcgtggcga cggggaaata tgtggacgtg ctgctcgacg
     5581 tcgtggggga gcggctcctc tttccaaccg aattcgcagg tcgcggcgac atgagtcgcg
     5641 gagccctgct cctgcgctcg gcccgcgaag gccgggaact cgcctacgag ccggtcgcgg
     5701 gcgcgctggg gcgccttcgg cagcgaacca ggggaggagt aagatgacgg cgactgcgag
     5761 gcgggccgcc gtcgcggtcc gcatcccgag cgatgggact gagatgcggg agaccgcgat
     5821 cgtggtgcgc gacgcgctgc gggagctggg gatgaagccc cccgtggaag tcgatcctct
     5881 gtgatcgaag ccgccggacc gagtgtaccg ggggctggat tcggcggtga tcgggatcac
     5941 gacttgttgc cggacatggg gttagcatag ccccaggtcg ggatgctccg accaaaatgc
     6001 aaccggaggt tagacatggc tttcgacaag acctgggatc aagaggacgc gtggtggcgc
     6061 gagaactacg gtggccggcc gtacgccacc ggtcgcaact atgaggaatt ccgcccggcg
     6121 taccgctacg gatacgagtc gggacggcat catatgggcc ggagctggaa cgaagtggaa
     6181 gcggaccttc gcaccggctg ggacaagtac gagggccggg gcacttcgac cgagtccgcg
     6241 tgggagaagg tgaaggacgc cgtgcgcgat gcctggcacc gggtgaccgg acagagcgac
     6301 gtggacgcga gcaggatgag tgagagcgaa gtggatcggc tgtcgcacgg gggaagaccg
     6361 cgccagtagg cgacttcctg ccagctggac ctgtcagcct gagcggagcg aaggcgtgcc
     6421 atgcgcgtgc atggccgccc tcgttccgct caggctgaca accctacctt cgctccagat
     6481 ataccgcccc gcctcccgcc ccgcccacga tcagctctgc ctgaccgtcc ccgtcgaggt
     6541 cccccgcggc gggtgtcgcc aggaccggga cctccgcgcg gaaggccgtg tctcgcacga
     6601 aagcaggtgc caccggcgag ccgtcgttcc ggaacagggc caggccgtcg ttctccgagc
     6661 ccaccagcag gtcgagatcc ccgtccccgt cgagatcggc gagcgccggc gcgcttcggc
     6721 gaccgatctg gatccgctcg aactcatcgc tcagcagcac gaaccgcggc ccactcggcg
     6781 atccgtcgtt gcgatagtag ttgagccagc ccgaggactc gcccacgatc aggtccaggt
     6841 cgccatcccc gtccaggtcc cccagtgcgg gcacggtgtt gctgccgcgg gtgatggtga
     6901 ccagcgcggt gtccgccggc tcgaacccgc gctcggtccc gcggtaccag gcgagtcgcg
     6961 gcccccactg gccgatcagc gcgtcgagcc ggccgtcgcc gtccaggtcc gcgaacgccg
     7021 gcgcggcgtg gaaccgccgg cccagctcca gcgggacccg catccggaac gccggacgct
     7081 ccggggagcc gacattctcc agccggtaga cgaaggaggt ctggagatcc gaggggtcga
     7141 gcttgttcga gagcagcagg tcgaggtccc catcgccatc cagatcggcg agggcgggca
     7201 ccgcctcggc accgatgtcg agcaccggga gcaaccgtcg ggtccgaacc tcccatccgc
     7261 cggtgccgcg ggtgaggtag aacaggttct cggccgatgt ccgcaacgga ttgtaggccc
     7321 cgccgaggac gccgacgacc agatcggccc gcccgtcccc gctcaggtcg ccgaacgccg
     7381 gcgcattgta gcccgaggtg agcaacggcc gccccacggg gaactgcacc ggcgggtgcc
     7441 tgaagtcggg cgcgggacag gtgcctccat tgggaatcag cagcaggccg ggctcgaaga
     7501 agtcccccca gaagagatcg aggtcctcgt cgccatcgtg atcggcgagc gccatggtgt
     7561 tggcaccgtg catgctgggg cccagcagcg gggggccgac ctgctgcccg atgatgcgga
     7621 tgccctcgaa ctcgctggcg accaggcgga acgccgggac accacgcggg accggcgcca
     7681 cggcctcgta gcgcgccacc gtgccgtcga gccggccgat caggaggtcg gagcggccat
     7741 tgcagtccag gtcgccgagc tggggaatgt tctgtcggtc ggaaaagatc ggcgccccgt
     7801 ccacgtcctt cagcgtgtcg gccgccagca cgaagcggta ctcgcctcgc cgcccgtcgt
     7861 tccggtagta cttgatgtaa ctgaaccgct gctcggccag gaggtccagg tcgccgtcgc
     7921 catccacgtc ggcgaagcgg taccactctc ccacgtcgat gtcgccgtac ctggagctcc
     7981 gcggcaggaa ccgcggcagg ccgtcccgct cgccgtcgcg ctcgaacagg gcgacgccac
     8041 cggtcacctc ctggaggaag agatcgagat cgccgtcacc atcggcgtcg agcaactgcg
     8101 ggcggggagc gttgaagccc ccgtggaagg ggagctggag gaggcggcct gcggtgtcca
     8161 tcaccgggaa cggcgcgacg acggcgtggt accgtggggc gccggcttca ggctccgga
//
LOCUS       DASUYN010000502         2278 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1484162, whole genome shotgun sequence.
ACCESSION   DASUYN010000502 DASUYN010000000
VERSION     DASUYN010000502.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2278)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2278)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2278
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1484162"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..409
                     /locus_tag="VF061_09770"
     CDS             <1..409
                     /locus_tag="VF061_09770"
                     /inference="COORDINATES: protein motif:HMM:NF013226.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="UbiA family prenyltransferase"
                     /protein_id="HEX6669835.1"
                     /translation="ALVKQADYARAGIPMMPVVRGEARTKYEMLVYTLILLPLTILPS
                     FFGALGPFYGVAAALLGARLLWHCVRVVREQPVTPVAWGMYRYSLLYLALLFVAMGVD
                     RSLPFERPATPQLIILDHAARQTAIPVSGHVGH"
     gene            426..2249
                     /locus_tag="VF061_09775"
     CDS             426..2249
                     /locus_tag="VF061_09775"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /protein_id="HEX6669836.1"
                     /translation="MTDSIAEAATRRLPPPGRLVRLWPRVRPYRGQLVLASLALVTSG
                     LLALAFPMAVRYLLDAAFVDRNRALLDRIAIGLVALFSVQAVLNYAQAYLLSAVGEQS
                     VAGLRKELFARLLEMPPGFFAERRTGELTSRLTSDIGLLQGVLSHQISEFSRQILSLA
                     GGVILLTWLQPRLTLTALAVAPLVVGSAIFFGRRLRNITTGVQDRLAEATGVAEEAFS
                     QIRTVQSFVQEPTERARFGERVAASVQAALQRARVRGVFFGMLTLSTFAGVTFVLWQG
                     GVLVLEGELTAGSLVSFLLYTITIAASIGALAGSFTAYQEAVGAAERVFEILEMEPGI
                     ADPPDPAALAQPVAGRVAYEGVHFRYHDDGSQPWTLEGIDLEVAPGEVVALVGPSGGG
                     KTTLVSLLTRFWDVSRGHLRLDGHDVRTLRLADLRGAIGIVPQEPALFSGTIRENIAY
                     ARPGASEAEIVAAAKAAHAHEFVERLPLGYDTVVGERGVKLSGGQRQRVAIARAILKD
                     PAVLILDEATSNLDTESERLIEDALGRLLVGRTTLIIAHRLSTVRRADRLVVVDRGRI
                     VEEGSHGELLARGGLYARLYQRQFRDDIADLSPSLPTELRA"
BASE COUNT          288 a          778 c          846 g          366 t
ORIGIN      
        1 ggccctggtc aagcaggccg actacgcccg ggcgggcatc ccgatgatgc ccgtggtgcg
       61 cggcgaggcc cggaccaagt acgagatgct ggtgtacacc ctgatcctgc tgccgctcac
      121 gatcctgccc tcgttcttcg gcgcgctcgg tccgttctac ggtgtggccg ccgcgctgct
      181 cggcgcgagg ctgctgtggc attgcgtgcg cgtggtgcgg gagcagccgg tcacgccggt
      241 cgcgtggggg atgtatcgct actcgctgct ctacctggcc ctgctcttcg tcgccatggg
      301 cgtggaccgg agtctcccct tcgagcgccc ggcgactccc cagctgatca ttctcgatca
      361 cgccgcccgg cagacggcga tccccgtgag cggacacgtc ggccactgag ctggcgcgcg
      421 ggtctatgac cgattccatc gcggaagccg cgacgcgccg cctcccgccg ccgggccgcc
      481 tggtccgtct gtggcccaga gtgaggccgt accgcgggca gctggtgctc gcgagcctcg
      541 cgctggtgac gagcgggttg ctggcactgg ccttccccat ggcggttcgc tatctgctcg
      601 acgccgcctt cgtggaccgg aaccgcgccc tgcttgaccg catcgccatc gggctggtgg
      661 ccctcttcag cgtgcaggcc gtgctcaact atgcccaggc gtacctgttg agcgccgtgg
      721 gcgagcagtc cgtcgcgggg ctgcggaagg agctgttcgc caggcttctg gagatgcccc
      781 cggggttctt cgccgagcgc cggacgggcg agctgaccag ccggctcacc tcggacatcg
      841 ggctgctcca gggcgtgctg agccaccaga tctccgagtt ctcccgccag atcctctcac
      901 tcgcaggcgg cgtgattctg ctgacctggc tccagccccg gctcacgctg accgcgctgg
      961 cggtggcccc gctggtggtc ggctcggcga tcttcttcgg ccggcggctc cggaacatca
     1021 cgaccggggt gcaggaccgc ctggccgagg ctaccggcgt cgcggaagaa gcgttctccc
     1081 agatccgcac ggtgcaaagc ttcgtccagg agcccaccga gcgcgcccgc ttcggcgagc
     1141 gggtggccgc gagcgtgcag gcggcgctcc agcgggcgcg ggtgcggggc gtgttcttcg
     1201 gcatgctcac cctctccacc ttcgccggcg tgaccttcgt gctgtggcag ggcggggtgc
     1261 tggtgctgga gggcgagctc accgccggct ccctggtctc cttcctcctg tataccatca
     1321 ccatcgcggc ctccatcggg gcgctggcgg ggagcttcac cgcctaccag gaggcggtgg
     1381 gcgcggcgga gcgggtcttc gagattctgg agatggagcc ggggatcgcc gatccgccgg
     1441 atcccgccgc gctcgcgcag ccggtcgcgg gacgggtggc gtacgaggga gtccacttcc
     1501 gctatcacga cgatgggtca cagccgtgga cgctggaggg aatcgacctc gaggtggccc
     1561 cgggagaggt ggtggcgctg gtggggccct cgggcggcgg caagacgacg ctggtgtcgc
     1621 tgctgacccg gttctgggac gtctcccgcg gccacctgcg gctggacggg cacgacgtgc
     1681 gcaccctgcg gctcgcggac ctccgcggag ccatcggcat cgtgccacag gagcccgcgc
     1741 tgttcagcgg gaccatccgg gagaacatcg cgtacgcacg gccgggcgcg tccgaggcgg
     1801 agatcgtcgc ggccgcgaag gccgcgcacg cgcacgagtt cgtcgagcgg ctgccgctgg
     1861 gctacgacac ggtggtgggc gagcgggggg tcaagctctc cggcggccag cgccagcggg
     1921 tcgcgatcgc ccgggcgatc ctgaaggacc cggcggtcct gatcctggac gaggccacga
     1981 gcaacctcga caccgagagc gagcggttga tcgaggacgc gttggggcgg ctgctggtgg
     2041 gtcggacgac gctgatcatc gcccaccgtc tcagcacggt tcggcgggcg gaccggctgg
     2101 tggtggtgga cagggggagg atcgtggagg aggggtccca cggcgagctg ctggcgcggg
     2161 gtgggctcta cgcccggctg tatcagcggc agttccggga cgatatagcg gacctgagcc
     2221 cgagcctccc caccgagctc cgcgcgtagt cgaacctggc ggcagatcga gcaggccg
//
LOCUS       DASUYN010000503         3130 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1924897, whole genome shotgun sequence.
ACCESSION   DASUYN010000503 DASUYN010000000
VERSION     DASUYN010000503.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3130)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3130)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3130
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1924897"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            125..2776
                     /locus_tag="VF061_09780"
     CDS             125..2776
                     /locus_tag="VF061_09780"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX6669837.1"
                     /translation="MADLPADVVDALVDRYALERELGRGGMATVYLAQDLKHRRPVAL
                     KLLHAELGLSRAPQRFRREIKTAARLHHPHICAVFDSGEIPGAGSQPPRLWFTMPFVR
                     GESLRERLRREGVLPVEEALRITREAAAALQYAHTEGVIHRDIKPENILLAHHGATLV
                     ADFGVARTVDAREEQHLTVAGLVVGTPAYMAPEQATGDREVDARADQYALAVTCYEML
                     TGEPPFTSRTPAGIIATRLREPTPSARAVRPEVPPALDGALRRALSLEPGDRFDSVAE
                     FARALGSRGVGPSAGAPAAAPLRRRTALALGALLALALVVAGFVILRSRSEAARSTPG
                     PSVLAVLPFENLGDTSEAYFADGLTDEIRGKLSRVPGLAVIARASSEQYRGSTKPSPQ
                     IARELGADYLLTGTVRSERSTNGPSRVRVVPELVEIRRGAAPRTRWQEPFDAALTSVF
                     DVQAAIAGNVANALGVVLADSVRGTLAARPTTNLAAYDAFLKGEATSQRLVAQDPATL
                     RRALVFYEQAVALDSTFVPAWAQLARTAAQLHATGNATPALAEQARRGAEMALALGPG
                     RPEAYLALGAYYRGVQGDARRALGNYEAGLRVAPNNMDLLAAASVAEQVVGRWESSLA
                     GLERAVALDPRSARVVRRWAHTLLLMRRYDEADRAVDRALGLAPTDIAVFQDKVMVAI
                     GRGDLDEARRRLRAAPAGIDPVELITYFAVFEDLWWLLDDEQQRRLLSLPPDAFPSRS
                     TWALVRTQVLHHRGDVRKARAYADSALPELEQAVREGPEDGVGRVLLGLSLAHAGRPA
                     EAVREGERGVELQPPAEDAYVGPYLQQQLARIYLLAGRPDEALDRLEPLLQMPHTLSP
                     GWLRVDPTWDPLRGHPRFQRLVGEEGA"
     gene            complement(2820..>3130)
                     /locus_tag="VF061_09785"
     CDS             complement(2820..>3130)
                     /locus_tag="VF061_09785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669838.1"
                     /translation="VSDPDGAVQLHVTNHSGRPMEVYAAGSGTTYRIGTVHPGLSGRF
                     RVRPTMTVNGPVEFVARSGDGPLVRSGLILLAPGDLVEFELEAHAVSSTATVRPRLRV
                     "
BASE COUNT          405 a         1169 c         1144 g          412 t
ORIGIN      
        1 tgatcgtggg aggggtgagc aagttcgtgc tgcgaaagtc ggcctgcccg gtgctgatcg
       61 tcccgccgag cctggcgcgc gacactatcg agtagctttg gggcggagac cgacaccgcc
      121 accgatggcc gacctgcccg ccgatgtggt cgacgcgctc gtcgacaggt acgcgctcga
      181 gcgcgagctc ggccgcggcg gcatggccac ggtctacctg gcccaggacc tcaagcaccg
      241 gcgccccgtc gccctgaagc tgctccacgc cgagctgggc ctctcccggg cccctcagcg
      301 cttccgccgc gagatcaaga ccgccgcccg gctccatcac ccccacatct gcgccgtctt
      361 cgactcgggt gagattcccg gcgccgggag ccagccgccg cggctctggt tcaccatgcc
      421 gttcgtgcgc ggcgagtcgc tgcgcgagcg cctgcgccgg gagggcgtgc tcccggtcga
      481 ggaagcgctc cgcatcacgc gggaagcggc ggcggcgctg cagtacgccc acaccgaagg
      541 cgtgatccac cgggacatca agccggagaa catcctgctg gcgcaccatg gcgccacgct
      601 ggtggccgac ttcggcgtgg cccggacggt ggatgcgcgg gaggaacagc acctcaccgt
      661 ggccggtctg gtggtgggaa ccccggcgta catggccccg gagcaggcca ccggcgaccg
      721 cgaggtggac gcccgcgcgg accagtacgc cctggccgtc acctgctacg agatgctcac
      781 gggcgagcca ccattcacca gccgcacgcc cgccgggatc atcgcgaccc ggctccgcga
      841 gccgaccccg agcgcccgcg ccgtccggcc cgaggtgccg cccgccctgg acggcgcgct
      901 ccgtcgcgcc ttgtcgctgg agcccggaga ccggttcgac tcggtggcgg agttcgcccg
      961 cgcgctcggc tcgagggggg ttggtccgag cgccggtgca ccagccgccg cgccgctccg
     1021 ccggcgcacc gccctcgctc tcggcgcgct gctggccctg gcgctggtcg tcgcgggctt
     1081 cgtgatcctg cggagccgga gcgaggccgc gcgctcgact cccggcccca gcgtcctggc
     1141 cgtccttccc ttcgagaacc tgggcgacac cagcgaggcg tacttcgccg acgggctcac
     1201 cgacgagatc cggggcaagc tctcgcgggt gccggggctc gcggtcatcg cccgggccag
     1261 ctccgagcag taccggggga gcacgaagcc gtcgccgcag atcgcgcggg agctgggcgc
     1321 cgactatctg ctcaccggga cggtgcgctc ggagcggagc acgaacggcc ccagccgggt
     1381 gcgcgtggtg ccggagctgg tggagatccg gcgcggcgcg gcaccccgca cgcggtggca
     1441 ggagccgttc gacgccgcgc tcaccagcgt gttcgacgtc caggccgcca tcgccggcaa
     1501 cgtggccaac gccctcggcg tggtgctggc ggacagcgtg cgcggtacgc tggccgcccg
     1561 gccgacgacc aacctggccg cgtacgacgc cttcctcaaa ggcgaggcga cctcccagcg
     1621 gctggtcgcc caggatccgg cgaccctgcg gcgggcgctg gtgttctacg agcaggcggt
     1681 cgcgctcgac tccacgttcg tccccgcctg ggcccagctc gcgcggaccg cggcgcagct
     1741 ccacgccacc ggcaacgcca cgcccgcgct cgcggagcag gcgcgccgcg gcgccgagat
     1801 ggcactggcg ctgggaccgg gccggcccga agcgtacctg gccctcggcg cctactatcg
     1861 cggggtccag ggcgacgccc ggcgggcgct cggcaactac gaggccggcc tcagggtggc
     1921 gccgaacaac atggatctgc tcgccgccgc cagcgtggcc gagcaggtcg tggggcgctg
     1981 ggagtcttcg ctcgcggggc tggagcgggc cgtggccctc gacccccggt cggcccgggt
     2041 ggtgaggcgc tgggcgcaca cgctgctgct gatgcgccgg tacgacgagg ccgaccgcgc
     2101 ggtggaccgg gcgctgggac tggcgccgac cgacatcgcc gtcttccagg acaaggtgat
     2161 ggtcgccatc gggcggggag atctggacga ggcgcgccgc cgcctccgcg ccgcgccggc
     2221 gggcatcgat cccgtcgagc tgatcaccta cttcgccgtc ttcgaggatc tgtggtggct
     2281 gctggacgac gagcagcagc gccggcttct gtcgctgccg ccggacgcct tcccgagccg
     2341 gagcacgtgg gccctggtgc ggacccaggt gctgcaccat cgcggtgatg tgcggaaggc
     2401 gcgggcctat gccgactcgg cccttccgga gctcgagcag gccgtgcggg aagggcccga
     2461 ggacggggtg gggcgcgtgc tcctgggtct gtcgctggcc cacgccggcc ggccggccga
     2521 ggccgtgcgc gaaggggagc gcggcgtcga gctgcagcct ccagcggagg acgcctacgt
     2581 cggtccatac ctccagcagc agctcgcccg gatctacctg ctcgcggggc ggcccgacga
     2641 ggccctggat cggctcgagc cgctgctcca gatgccccat actctgtcgc ccggatggct
     2701 ccgggtcgat cccacgtggg acccgctgcg cgggcacccg cgtttccagc gactggtcgg
     2761 ggaggaaggg gcatgacccc ggccatgccc ccttcactct gctcggggtg accgagctat
     2821 cacacccgca gccgcggccg caccgtggcg gtgctgctca ccgcatgggc ctcgagctcg
     2881 aactcgacaa gatcgcccgg ggcgaggagg atcaggcccg accgcaccag gggcccgtcg
     2941 ccggatcggg ccacgaactc gaccggcccg ttgacggtca tggtcgggcg caccctgaac
     3001 cgtccggaca accccggatg cacggtcccg atccggtagg tcgtccccga tcccgcggcg
     3061 tacacctcca tcggccggcc ggagtggttg gtgacgtgga gctggaccgc cccgtccgga
     3121 tcgctcactc
//
LOCUS       DASUYN010000504         3058 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_159758, whole genome shotgun sequence.
ACCESSION   DASUYN010000504 DASUYN010000000
VERSION     DASUYN010000504.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3058)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3058)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3058
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_159758"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(301..1161)
                     /locus_tag="VF061_09790"
     CDS             complement(301..1161)
                     /locus_tag="VF061_09790"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD/SigA"
                     /protein_id="HEX6669839.1"
                     /translation="MLRSSPSGSFDQYLLDIQKLPMITDPEEEKRLARRALAGDEVAA
                     ERLVTANLRFVISYVKKYQGHGLDLSELVAIGNEGLLKAVRKFDPDHGVKFISYAVWW
                     VRQAVLKALAEQTRSVRIPLNQNSALVRMARAQSFLAQELGREPTDEEVAIALNDTVD
                     NIRSARRMTSTEVSLDAPVERQDRGASTFGERVAGNGQVEIEEMTDARLQREFIDRLF
                     QRHLTPRERKILSLYYGLEEGSEALTLEKIGALLGVTRERIRQIRERAFEKLRDSPDV
                     RALRGYWGAA"
     gene            complement(1422..2507)
                     /gene="aroB"
                     /locus_tag="VF061_09795"
     CDS             complement(1422..2507)
                     /gene="aroB"
                     /locus_tag="VF061_09795"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003856 - 3-dehydroquinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HEX6669840.1"
                     /translation="MTTVTVRHALGSYPVYVEAGTLARLGDLTGRHLPGRRVALIADA
                     SVHRLLAEGRLAGAHWDGAVLTFPPGERSKTRETWGRLTDELLRLGFGRDSGIVALGG
                     GVAGDLAGFVSATYMRGIPCLQVPTTLLAMLDASVGGKTGVDTPEGKNLIGAFHPPVA
                     VLADPLVLATLPDREYRAGLAEAVKHGLIADREYFAWIEGSVAALRARDPAALQHLVR
                     RSVEIKAEVVGEDEREAGRRAILNAGHTVAHALERATDFRLPHGEAVGLGLVAEAALA
                     TGLGLASPEAGARLAALLERLGLPTRVGEPLGEERILAAMGSDKKNRAGGVRFALPRG
                     VGTMGGGPEWTTEAGEPAIRAALKSIS"
     gene            complement(2504..>3058)
                     /locus_tag="VF061_09800"
     CDS             complement(2504..>3058)
                     /locus_tag="VF061_09800"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: protein motif:HMM:NF014033.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008817 - corrinoid adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HEX6669841.1"
                     /translation="SVRVRIYTRTGDAGETGLFGGGRVSKDHPRTSAYGDVDELNSVI
                     GVVRATAPVELFDDLLEGIQRDLFAIGGRLATPQPEKVAKAIAKAVLSPERAESFERV
                     MDEAEGELPPLRAFVLPGGTPKAAALHLARTVCRRAERSVVRLAREEEAPAEILVYLN
                     RLSDLLFTLARLANHRAGVGDTTW"
BASE COUNT          441 a         1121 c         1031 g          465 t
ORIGIN      
        1 agagggggaa gatgggcagc cggagaggca tggctgggaa tttaggcggt acccctccgc
       61 cccgcgcccc accctggcgg taccgcacca ccgcaactgc accacccggc ggtaccccgc
      121 aactgcacct caccgcctgg gcggtacggc ggtagggcgg tacggcgctg gaatccggtc
      181 ggagacgcca aagcgatgag ggatcttctc acccggtcat cgatggccgt tgagaagatc
      241 cctcgcttcg ctcaggatga caggtaggct cggtccgcct gtccgcctgt ccgccgtccc
      301 ctacgccgct ccccagtacc cacgcagcgc ccgcacgtcc gggctgtcgc gcagcttctc
      361 gaaggcgcgc tcgcggatct ggcggatgcg ctcgcgggtg acaccgagga gggcgccgat
      421 cttttcgagg gtcagggcct cggagccttc ctcgaggccg tagtagagcg agaggatctt
      481 gcgttcgcgg ggggtgaggt ggcgctggaa gagccggtcg atgaactcgc gctgcaggcg
      541 cgcgtcggtc atctcctcga tctcgacctg gccgttcccg gcgacccgct caccgaaggt
      601 gctggccccg cggtcctgcc gctccaccgg cgcgtccagc gacacctcgg tcgaggtcat
      661 gcggcgcgcg gagcggatgt tgtccaccgt gtcgttcagc gcgatcgcga cctcctcgtc
      721 ggtcggctcg cgccccagct cctgggccag gaagctctgc gcccgcgcca tccggaccag
      781 cgcggagttc tggttgagcg gaatgcgcac gctccgggtc tgctccgcca gcgccttgag
      841 cacggcctga cgcacccacc acaccgcgta agagatgaac ttcacgccgt gatcgggatc
      901 gaacttccgg accgccttga gcagtccctc gttgccgatc gccaccagct cggacaggtc
      961 gaggccgtgg ccctggtact tcttcacgta ggagatcacg aaccggaggt tcgcggtgac
     1021 cagccgctcc gcggccacct cgtctcccgc gagcgcgcgg cgggcgagcc gcttctcctc
     1081 ttcgggatcg gtgatcatcg ggagcttctg gatatcgagg agatactggt cgaacgatcc
     1141 ggacgggctg gaccggagca aggcacgggc tttcccagta cggacgtggg ccatacacac
     1201 cctcgatgga ggttgccggg acagcgacga tgtagtgggc ggccaagtgg cggaaaggtg
     1261 cgatcaatat agggtttacc ttagggaggg tcaagcaaat acggctttcc acatcacaaa
     1321 atgtttgtgg acaaccggtt cgtcgctttg tccaccgccg gccccggtta tccacggccg
     1381 gcgccgagtg ttgaaagcgc aagttattgc agtattgtgg cttaggaaat ggacttcagg
     1441 gctgcccgaa tcgccggctc ccccgcctcc gtggtccact cgggtccccc gcccatcgtc
     1501 cccacgcctc gcggcagcgc gaaccggacc ccgccagccc gattcttctt gtcgctcccc
     1561 atcgccgcga ggatgcgctc ctcgcccagc ggctcgccca cccgggtggg cagtccgagg
     1621 cgctccagca gcgccgcgag ccgcgccccc gcttccggcg acgcgagccc cagcccggtc
     1681 gccagggccg cctccgccac cagaccgaga cccaccgcct cgccgtgggg gaggcggaag
     1741 tcggtcgccc gctccagcgc gtgggccacc gtgtggcccg cgttgaggat cgcccggcgt
     1801 cccgcctcgc gctcgtcctc tcccaccacc tcggccttga tctccacgct gcgccggacc
     1861 aggtgctgga gcgcggccgg gtcccgcgcg cgcagggccg ccacgctccc ctcgatccag
     1921 gcgaagtact cccgatcggc gatcagcccg tgcttcaccg cctccgccag accggcgcgg
     1981 tactcgcgat cgggcagggt ggcgagcacg agcgggtcgg ccaggacggc cacgggcggg
     2041 tggaacgcgc cgatgagatt cttgccctcg ggcgtgtcca ccccggtctt gccgcccacc
     2101 gacgcatcca gcatggcgag cagcgtggtg gggacctgca ggcagggaat gccgcgcatg
     2161 taggtcgcgg agacgaatcc ggcgaggtcg cccgcgacgc cgccgcccag cgccacgatc
     2221 ccgctgtcgc ggccgaagcc cagccgcagc agctcgtcgg tgagacggcc ccaggtctcc
     2281 cgcgtcttgc ttcgctcgcc cgggggaaag gtgaggaccg cgccgtccca gtgggcgccc
     2341 gcgagccggc cctcggccag caggcggtgg accgatgcgt ccgcgatcag cgcgacccgg
     2401 cgcccgggga ggtgtcgccc ggtcaggtcg cccagtcgcg cgagggtccc ggcctccacg
     2461 tacaccggat agctgcccag cgcgtggcgc acggtcaccg tcgtcaccag gtcgtgtctc
     2521 ccacgccggc ccggtggttc gccagccgtg ccagggtgaa gagcaggtcg gacaggcggt
     2581 tgaggtagac caggatctcg gcgggcgcct cctcctcccg ggcgagccgg accacgctcc
     2641 gctccgcgcg ccggcacacc gtccgcgcga ggtggagcgc ggcagccttg ggcgtccctc
     2701 ccgggagcac gaaggcccgc aggggcggca gctccccttc cgcctcgtcc atgacccgct
     2761 cgaacgactc cgcgcgctcg ggggagagga cggccttggc gatcgccttg gcgacctttt
     2821 ccggctgggg cgtcgcgagc cgcccgccga tggcgaacag gtcgcgctgg atgccctcca
     2881 gcaaatcgtc gaacagctcg accggcgcag tcgcgcgcac gacgccgatg accgagttga
     2941 gctcgtccac gtcgccgtag gccgaggttc tcgggtggtc cttgctcacc cgtccgccgc
     3001 cgaacagtcc cgtctcgccc gcgtccccgg tcctggtgta gatcctcacc cgcacact
//
LOCUS       DASUYN010000505         3820 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_601994, whole genome shotgun sequence.
ACCESSION   DASUYN010000505 DASUYN010000000
VERSION     DASUYN010000505.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3820)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3820)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3820
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_601994"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..348)
                     /locus_tag="VF061_09805"
     CDS             complement(<1..348)
                     /locus_tag="VF061_09805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669842.1"
                     /translation="MRLDESAGAPLEPVVPQPAVAEQPVQSGPPRRPHFVAMTTHALD
                     ASEVGEPGATLRARYWNPHERRWNEADYDSLEGLRRRHVDEEGWELLQEQQLDAPLAV
                     ELIFKAHRIDFTRP"
     gene            complement(386..928)
                     /locus_tag="VF061_09810"
     CDS             complement(386..928)
                     /locus_tag="VF061_09810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEX6669843.1"
                     /translation="MRFDLASSIDVLGRTPGTLRALLDGLGDAWTRGNEGPDTFSPFD
                     VVGHLIDGEETDWMPRAAIILARDPGAAFAPYDRFRHYQRNRGRSLASLLEEFARLRA
                     ANLERLASWHLGEGELDLWATHPSLGSVTLRQLLATWVAHDLGHIAQVVRVMAKQYRD
                     QVGPWLHYLPVLTDHEAPRS"
     gene            1046..1522
                     /locus_tag="VF061_09815"
     CDS             1046..1522
                     /locus_tag="VF061_09815"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEX6669844.1"
                     /translation="MRDQYRSKQELCDELAGLRKQVADLKAEMVIRRRVEDALRHSEE
                     QLRALGDSAPTGLCLVRADGTVRAANLPFARLLGYESAAELQRLSEAFGVFDGPDELS
                     RTLALAEGHQRLATVRFKRKDGTIQGLGVIGSRCREGDGVALAVLEQERVPATAAG"
     gene            1593..2351
                     /locus_tag="VF061_09820"
     CDS             1593..2351
                     /locus_tag="VF061_09820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669845.1"
                     /translation="MQSSIRLAATVAALAAAAGCGGTGAAPEAAPAAVPPSSSPTDTS
                     GLTRVRFARGTTSGLVNDSLEAGETRGYLLGAEQGQVMMVHAITWPVRQEGSPPPAAT
                     VRVYATADGRELTVPAGAGSLWSGRLPATGDYAVQVSATGPAAYTLAVQIPRRLSPGA
                     GDPTAAIAGTAPSRAPVDYIIEGESGQTLAASLRESDPATLHVYGLDDGAQLAPLSEQ
                     RRLWAGPLPATQDYVVSVVPAAEGAAYELTVTLR"
     gene            complement(2355..3431)
                     /locus_tag="VF061_09825"
     CDS             complement(2355..3431)
                     /locus_tag="VF061_09825"
                     /inference="COORDINATES: protein motif:HMM:NF005214.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX6669846.1"
                     /translation="MILPANLEITQEVFVAVKKKGARWTGTRKAASAAAGKAKAESDR
                     KLQREGEQRRKKSGGNGKREGAVQAAERKYPASPQPKQHLEKPGLESDLEPRPEYLAP
                     AYRGSGKLEDKVALVTGGDSGIGRAVAVLFAREGADVAIVYLSEDADAEETRRAVEAE
                     GRRAILIPGDVTDSSFCDDAVNTTVRELGGLDILVNNAAYQEHLPSLEDITDEQLDRT
                     FRTNIYGYFYMARAALPHLKEGSAIVNSGSVTGIQGSKELLDYASTKGAIHAFTKSLA
                     QNLVERGIRVNAVAPGPVWTPLNPADQDAEKVAKFGSDVPMKRPAQPEEVAPAYVFLA
                     APACSSYITGEVLPVLGGETVGSG"
     gene            3508..>3820
                     /locus_tag="VF061_09830"
     CDS             3508..>3820
                     /locus_tag="VF061_09830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669847.1"
                     /translation="MVHLHEITEDRRMRYAAKPLFVITLAAGGCAPPGGTEGAAPSGA
                     VTGGVEITDPSYGPSPALPTPDTAHQVSRFPRVLGWPEGKTPTAPPGFTVTRYADDVV
                     RP"
BASE COUNT          517 a         1388 c         1349 g          566 t
ORIGIN      
        1 cgggcgggtg aagtcgatcc ggtgggcctt gaagatcagc tccaccgcga gcggggcgtc
       61 cagctgctgc tcctggagca gctcccagcc ttcctcgtcc acgtggcggc ggcgcaggcc
      121 ctcgagggag tcgtagtccg cctcgttcca gcgccgctcg tgcgggttcc agtagcgggc
      181 ccggagggtg gccccaggct cccccacctc cgaggcgtcc agcgcgtggg tggtcatcgc
      241 gacgaagtgc ggccgccggg gcgggcccga ctggaccggc tgctcggcga cggcaggctg
      301 cgggacgaca ggctccagcg gggctcccgc cgactcatcc agccgcatcg tgggctcctc
      361 tcgagggcat tgcgctgaag cgtaactagg accggggagc ttcgtgatcg gtgagtacgg
      421 gcagatagtg cagccagggt cccacctggt cgcggtactg cttggccatg acccggacga
      481 cctgtgcgat gtggccgaga tcgtgcgcca cccaggtcgc gaggagctgc ctgagcgtga
      541 cggacccgag gctcgggtgc gtggcccaaa gatcgagctc accctcgccc aggtgccagg
      601 aggcgagtcg ctccagattc gcggcgcgga gccgggcgaa ctcctcgagg agcgaggcga
      661 gactgcgtcc ccgattccgc tggtagtgcc ggaagcggtc atagggcgcg aaggcggcgc
      721 cagggtcccg ggccaggatg atcgccgccc ggggcatcca gtcggtctcc tcgccgtcga
      781 tcaggtgtcc caccacgtcg aacgggctga aggtgtcggg gccctcgttg ccccgcgtcc
      841 aggcgtcgcc gaggccgtcc agcagcgcgc gcagggtgcc gggggtgcgg ccgaggacgt
      901 cgatggagga tgccaggtcg aaccgcatgc gcacctcggg gtaggtgtga ggccgattgc
      961 accatcgttg caacggtgaa cccgatgggt cggcgagcgg cggcaagggt gcaagccgaa
     1021 cgctcccagc cgtccttcat gcacgatgcg cgatcaatac cggtccaaac aagagctctg
     1081 cgacgagctc gccggcctcc gcaagcaggt ggccgacctc aaggccgaga tggtgatccg
     1141 ccgacgggtg gaggatgcgc tccgccattc cgaggagcaa ctccgcgccc tcggcgattc
     1201 ggcgccgacc ggcctctgcc tggttcgagc ggacggcacg gtccgggcgg ccaatctgcc
     1261 cttcgcccgg ctgctgggct acgagtcggc ggcggagctc cagcgcctca gcgaggcctt
     1321 cggcgtgttc gacgggccgg acgagctgtc gcgcacgctg gcactcgccg agggccacca
     1381 gcggctggcg accgtccggt tcaagcggaa ggacggcacc atccaggggc tcggcgtgat
     1441 cggatcgcgg tgtcgggagg gggacggggt ggcgctggcg gtgctggagc aggagcgcgt
     1501 gccggctacc gccgcgggtt agaccggtct gatgccgcga gctgccgggg cgccgggtta
     1561 tgcttctccc agtcgccacc agggagctcc ccatgcagtc gtccatccgg ctcgcggcca
     1621 ccgtcgccgc actcgccgcg gcagccggat gcggcgggac gggcgccgcg cccgaggccg
     1681 caccggccgc cgtccccccc tcctcctcac ccaccgacac ctccggcctg acccgggtgc
     1741 gattcgcccg cgggaccacg tccggcctcg tgaacgacag tctcgaggcc ggggagaccc
     1801 gcggctatct gctgggcgcg gagcagggac aggtgatgat ggtgcacgcg atcacctggc
     1861 cggtccggca ggaagggtcg ccaccgcccg cggcgacggt gcgggtgtat gcgacggccg
     1921 acgggcggga gctgaccgtg cccgccggag cgggatccct gtggtcgggg cggctgcccg
     1981 ccaccggcga ctacgccgtg caggtgagcg ccaccgggcc ggccgcctac acgctcgcgg
     2041 tccagatccc ccgccggctc tcgccgggcg ccggcgatcc cacggcggcg atcgccggca
     2101 ccgcgccgtc ccgggcgccg gtcgactaca tcatcgaagg agagagcgga cagacgctcg
     2161 ccgcgtccct gcgggagagc gatcccgcca cgctgcacgt gtacggactg gacgacgggg
     2221 cgcagctggc gccgctgtcg gagcagcgcc ggctctgggc cggtcccctg cccgccacgc
     2281 aggattacgt ggtgagcgtg gtgccggcgg cggagggcgc ggcgtacgag ctgaccgtca
     2341 ccctccgctg atcctcaccc cgagcccacc gtctccccac cgagcaccgg caggacctca
     2401 cccgtgatgt agctggagca ggccggcgcc gcgaggaaga cgtacgccgg cgcgacctcc
     2461 tccggctggg ccgggcgctt catcggtacg tcgctcccga acttggccac cttttccgcg
     2521 tcctggtcgg cgggattgag cggggtccag accggaccgg gcgccaccgc gttcacccgg
     2581 atgccgcgct cgacgaggtt ctgtgccagg gacttggtga aggcgtggat cgcccccttg
     2641 gtggaggcgt agtccagcag ctccttgctc ccctggatcc ccgtcaccga cccgctgttg
     2701 acgatcgccg acccctcctt caggtggggc agtgccgccc gcgccatgta gaagtagccg
     2761 tagatgttgg tccggaaggt ccggtccagc tgctcgtcgg tgatgtcctc cagggacgga
     2821 aggtgctcct ggtacgcggc gttgttgacc aggatgtcga gcccgcccag ctcgcggacg
     2881 gtcgtgttca ccgcgtcatc gcagaacgac gagtcggtca cgtcgcccgg gatcaggatc
     2941 gcgcgccgac cctcggcctc caccgcgcgc ctggtctcct ccgcgtccgc gtcctcgctc
     3001 agatacacga tggcgacgtc cgccccctcg cgggcgaaca gcaccgcgac cgcgcggccg
     3061 attcccgagt cgccgcccgt caccagggcg accttgtcct ccagcttgcc cgacccccga
     3121 tacgccgggg cgagatactc cgggcggggc tcgaggtccg actccaggcc cggcttctcc
     3181 aggtgctgct tcggctgcgg cgacgcggga tacttccgct ccgcggcctg caccgcgcct
     3241 tcccgcttcc cgttgccgcc cgacttcttc cgccgctgct ccccctcgcg ctggagcttc
     3301 cggtcggact ccgcctttgc cttccccgcc gcggcgctgg cggccttcct ggtcccggtc
     3361 cagcgcgcgc ctttcttctt cacggccaca aacacctcct gagtgatctc gagattggct
     3421 gggaggatca tgaccgcggg ggacgtcaga agtatgtgac agccctcacc cgcgagttgt
     3481 ctcgcggggc ggaccgacgc agtatccgtg gtccatctcc atgagatcac cgaggaccga
     3541 cgtatgcgat atgccgccaa accgctcttc gtcatcaccc tggccgccgg cggatgtgcg
     3601 ccgccgggcg ggaccgaggg cgccgcgccc tccggcgccg tgacgggtgg cgtcgagatc
     3661 accgatccga gctacggtcc cagtcccgcg ctcccgacgc cggataccgc ccaccaggtc
     3721 tcccgctttc cgagggtgct cggctggccc gagggcaaga cgccgaccgc gccgcccggg
     3781 ttcaccgtca cccgctacgc cgacgacgtc gttcgccccc
//
LOCUS       DASUYN010000506         2037 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1266078, whole genome shotgun sequence.
ACCESSION   DASUYN010000506 DASUYN010000000
VERSION     DASUYN010000506.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2037)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2037)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2037
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1266078"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(242..1153)
                     /locus_tag="VF061_09835"
     CDS             complement(242..1153)
                     /locus_tag="VF061_09835"
                     /EC_number="2.8.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA];
                     GO_function: GO:0050656 - 3'-phosphoadenosine
                     5'-phosphosulfate binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HEX6669848.1"
                     /translation="MTKISKPIFIVGTGRCGSTVFHRLLARHPRTMWLSGLSDRYPAR
                     PAWNRAAVSAMHRPLLRRFLGRVQPSEAYLFWDYHAYGFSAPCRDLVRGDVTARVRKQ
                     VRAALESQLTPEHDRLLIKITGWPRIGYLREVFEDARFVHIVRDGRAVASSLLHVDFW
                     RGWQGPHGWRAGLLSPEDQAVWESYDRSFTALAGLEWRIQMRAMDAARRDLDPSQFLE
                     TRYEDFCRQPWESCRRVLQFAELPESAAFERQVRAEPIRDMTTRWRGDLTQAQQDLLD
                     DLLREDLPRYGYQAADRSEPAHAAAGR"
     gene            1485..>2037
                     /locus_tag="VF061_09840"
     CDS             1485..>2037
                     /locus_tag="VF061_09840"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase domain-containing protein"
                     /protein_id="HEX6669849.1"
                     /translation="MPDKPNFFIVGAPKCGTTALYEYLRPHPNIFLSEVKEPHFFAKD
                     LGTYPYIKSVEAYARLFADAGPQHLGVGEASVYYLRSTVAIANIREFNPDARLIAMYR
                     NPVEMLYSFHAQLLYVAEESESDFETAWRLQEQRGRGFGLPPRSRGAFLVQYGELGRF
                     GTQTQRLLTIFPPEQVKLILYDDF"
BASE COUNT          340 a          697 c          680 g          320 t
ORIGIN      
        1 tgatggccgg cccgacgccg atctgggaga ccacctgcga gcaggcgatc accacggtgg
       61 ccgcccccat gagcccgaac tccgcgggcg tgagcagacg acccagcgcc atgagggcga
      121 ggaggtggac aacgacctga actccggtgc cggaaaacgt ccaggccatg ccgccgatcg
      181 cgcggccggt cagcccgcga ggcgcacccg cgctcctcgc acctggtgag ctcaaggttg
      241 gctagcggcc cgcggccgca tgggcaggct cggagcggtc agcggcctga tagccgtacc
      301 gcggaaggtc ctcacggagc aggtcgtcca gaaggtcctg ctgggcctgg gtgagatctc
      361 cgcgccagcg cgtcgtcatg tcgcggatgg gctcggcccg gacctgacgc tcgaacgcag
      421 ccgactcagg aagctcggcg aactggagca cccggcgaca gctctcccag ggctgtcggc
      481 agaaatcctc gtaccgggtc tccaggaact gacttgggtc gagatcccgg cgggcggcgt
      541 ccatcgcgcg catctggatc cgccactcga ggccggccag cgccgtaaag gaacgatcgt
      601 agctctccca tactgcctgg tcctcgggcg ataggagccc ggcccgccag ccatgcggcc
      661 cttgccaccc gcgccagaaa tccacgtgca ggagcgagct ggccacggcc cgaccgtctc
      721 gcacgatgtg gacgaaccgc gcgtcttcga agacctcccg gaggtatccg atccggggcc
      781 accccgtgat cttgatgagc agccgatcgt gttccggagt gagctgcgac tccagggcgg
      841 cgcggacctg cttgcggacc ctcgcggtca catcgccgcg gaccaggtcg cggcagggcg
      901 ccgagaaccc gtaggcgtgg tagtcccaga agaggtaggc ctcgctcggc tgaacgcggc
      961 ccagaaatcg gcggaggagt ggacggtgca tcgccgacac ggccgcgcgg ttccaggccg
     1021 ggcgcgccgg gtagcggtcg gagaggcccg agagccacat cgtccggggg tgccgtgcca
     1081 gcagccgatg gaacaccgtc gagccgcagc gtcccgtgcc cacgatgaag atcggcttcg
     1141 agatcttggt catttcccgc cgcggacgca tgatccatgc cttggttgcc ccgggtggtg
     1201 caccttcttg caccgggtat gccgaagaga cgattacact tacgaccgcc aggtcccccc
     1261 ttgggcgggc tcggctaggg caatctacaa cactccggcg ggtgggtgga gcggcggtgc
     1321 agcggctggc gggggggctg cacaccgggt tgccggctca gcttgacgct gaaagtcgcg
     1381 ccgggcactc tactgtgatg gcacccgagc ggcatcgttt ctgcagcgca gagggcccat
     1441 agctttttcc gtgaccgcct cgtacagctg gggagtccga catcttgccc gacaagccga
     1501 acttcttcat cgtgggcgcg cccaagtgcg gcacgacggc gctgtacgag tacctgcggc
     1561 cccatccgaa catcttcctg tcggaggtca aggagccgca cttcttcgcc aaggacctcg
     1621 gaacgtaccc ctacatcaag tcggtggaag cctacgcccg gctcttcgcc gacgccggac
     1681 cccagcacct tggcgtcggg gaggcgtcgg tctactatct ccgctcgacc gtcgctatcg
     1741 ccaacatccg cgagttcaat cccgacgccc ggctgatcgc gatgtaccgc aacccggtgg
     1801 aaatgctgta ttcgttccat gcgcagctgc tctacgtggc cgaggagtcg gagagcgatt
     1861 tcgagaccgc ctggcggctc caggagcaac gcggccgggg gttcgggctt ccaccccgct
     1921 cccgtggcgc cttcctggtg cagtacggcg agctcggccg gttcggcacc caaactcagc
     1981 ggctcctcac tatcttcccc ccggagcagg tgaagctgat cctgtacgac gacttcg
//
LOCUS       DASUYN010000507         5280 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_603784, whole genome shotgun sequence.
ACCESSION   DASUYN010000507 DASUYN010000000
VERSION     DASUYN010000507.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5280)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5280)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5280
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_603784"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1132
                     /locus_tag="VF061_09845"
     CDS             <1..1132
                     /locus_tag="VF061_09845"
                     /inference="COORDINATES: protein motif:HMM:NF013741.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HEX6669850.1"
                     /translation="GLGWIGEPALAHVIEGGFSWLPEAAAVVATHTAASIIAFIIITV
                     LHIILGELVPKALALLYPEEISGWVAAPLMGFAWVMARPIAVLNGTANRLLRLMKINP
                     PGETERLHSPEEIRMLVEQSTEGGSLLQQDARLLEGVFEFSEKTAQEVMTPRTQMVAL
                     EADLPVERAADEVATAGRSRYPVFTDSLDEIVGVVHAKDILAALRAQPGRTVREIMRP
                     PLFVPGTREVEDVLADMKRLKTHLAVVLDEYGGTAGLVTMEDLLEEIVGPIYDEYDPQ
                     EARARPVGAPQLDGAMPISEFNSEHGENLDDSDYTTIGGYVFGQLGRLPRPGDRVPAG
                     THTLEVVEMEGRRVKALRLHPPEPTTQREPESPVAGRESHAS"
     gene            1138..3207
                     /locus_tag="VF061_09850"
     CDS             1138..3207
                     /locus_tag="VF061_09850"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEX6669851.1"
                     /translation="MSLGSRAQPRAELNTALLDLGYRLAGVRTPEQAARIIAAVAQDV
                     LGWDAYSLDLYAAETGTVHAVVSMDRIGDGDPVDVPHAHPFGPAGAMTRKVVSEGAQL
                     ILRGVLEPPAEGLTPFGEVSRPSASLLFVPVRHGERVAGILSIQSYTPQAYDAGDLAV
                     LQTLADHCGSALERLRIEAALRESQVLLERAESAALVMTAHVGLDGRLLKVPPRLCEL
                     LGYSEAELRERTVLELAHPDDLALIGTELRRLLSAEVRSSDDTVRLVRRDGGVVWVYA
                     NSSPVQTASGATLYFLVYVRDVTERKLLEEQLRQAQKMEAVGQLAGGVAHDFNNLLTA
                     IIGNAELLLRVIEAEDPRRLDVLEINRAAHRAATLVRQLLAFSRKQVLQPRVVDPNVV
                     VTELSAMLRRIIGEHVELRLELQPGVGRVLADPGQLEQVITNLAVNARDAMPSGGTLT
                     IRTADVDADDVPVQSPESTPLVGPLVELSVRDDGVGMDERTLARLFEPFFTTKELGRG
                     TGLGLATVYGIVRQSGGHIRVNSRLHHGSTFTVYLPMVEGASEGAAAPPVWSDQPRVA
                     GTVLVVEDEATVRPLACRVLRARGYRVLEARGGAEALELVAEHEGQVDLLLTDIIMPG
                     LGGPALAQRLLREVPGLKVLYITGYSEEAIRQQGMLPAGGALLEKPFTAHQLAERVHA
                     ALVRTET"
     gene            3208..4164
                     /locus_tag="VF061_09855"
     CDS             3208..4164
                     /locus_tag="VF061_09855"
                     /inference="COORDINATES: protein motif:HMM:NF024785.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HEX6669852.1"
                     /translation="MRNVPAATPPGSLDLTGDAARRRRALQRSAVTVLEQAGYEELLP
                     PTFEYEDTFLRAGGSGVAERLLRFPDRDGRILALRYDFTSSIARIAATTFAGAKLPLR
                     LSYSGRVYRQEPERGGRPRETLQVGAELLGNGSLEADVEIVRLTIALIRAAGLEDFQV
                     NLGHVGVLAPGLAALEEPVRAQVRRWIDRKDRGGLTRALAGESGDAATLLHLPFVIGR
                     REALEAALGVTPVAAVGGLRHLLALDDALAPGERGHVVYDLGEVRGLDYYTGVHFEVF
                     VSGAGRAAGAGGRYDELMGRFGRPMPAVGVSIDLDAIAEVPL"
     gene            4161..4811
                     /gene="hisG"
                     /locus_tag="VF061_09860"
     CDS             4161..4811
                     /gene="hisG"
                     /locus_tag="VF061_09860"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: protein motif:HMM:TIGR00070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003879 - ATP phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HEX6669853.1"
                     /translation="MSRLRVALAKGRLYEPSVQRFRAAGIEPASDAGRRLLIPSSDPA
                     IEFLVVKPADVPVYVESGAADLGITGTDVLRETGADVLEPLELGFGYCRLVVASPARS
                     HYPELEGGITPRVATKYPRLAQAHFAAAGRPVDIIQVNGSVEVAPLLRLSHWIVDLVD
                     TGNTLRANGLVERETILECGAVLVANRASQKLKLEDYLRVMERLERNRGPRDAVSP"
     gene            complement(4879..>5280)
                     /locus_tag="VF061_09865"
     CDS             complement(4879..>5280)
                     /locus_tag="VF061_09865"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: protein motif:HMM:NF016084.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HEX6669854.1"
                     /translation="WGLERPRLALCALNPHAGESGLFGDEEPRVLRPAAAALGAAGPL
                     PADTVFLRAMRGEFDAVLAPYHDVGMTAIKVAAFGRAVNVTLGLPFPRTSPDHGTAFD
                     IAGQGRADASSMRAAIELAVELAGRTGGARV"
BASE COUNT          734 a         1831 c         1986 g          729 t
ORIGIN      
        1 ggggctgggg tggatcggcg agccggcgct ggcccacgtg atcgagggtg ggttcagctg
       61 gctgccggag gccgcggcgg tggtcgccac ccacacggcc gcgtccatca tcgcgttcat
      121 catcatcacc gtcctccaca tcatcctggg tgagctggtg ccgaaggcgc tggcgctgct
      181 ctaccccgag gagatcagcg gctgggtcgc ggcgccgctg atggggttcg cctgggtgat
      241 ggcgcggccc atcgcggtcc tgaacggcac ggcgaatcgg ctgctccggc tgatgaagat
      301 caacccgccg ggcgagaccg agcggctcca ctcgccggag gagatccgga tgctggtgga
      361 gcagagcacc gagggcggca gcctgctcca gcaggacgcg cggctgctcg agggcgtctt
      421 cgagttcagc gagaagaccg cgcaggaggt gatgactccg cgcacccaga tggtggcgct
      481 ggaggccgac ctgcccgtgg aacgcgcggc cgacgaggtc gcgacggcgg gccgctcgcg
      541 ctaccccgtg ttcaccgact cgctggacga gatcgtgggg gtggtgcacg cgaaggacat
      601 cctggccgcg ctccgggccc agccgggacg gacggtgcgc gagatcatgc ggccgccgct
      661 cttcgtcccc gggacccgcg aggtggagga cgtcctcgcg gacatgaagc gactcaagac
      721 ccacctcgcc gtggtgctcg acgaatacgg cgggacggcg ggactggtga cgatggaaga
      781 cctgctggaa gagatcgtcg gcccgatcta cgacgagtac gatccccagg aggcccgcgc
      841 ccggccggtg ggggcccccc agctcgacgg ggccatgccc atctccgagt tcaactccga
      901 gcacggggag aatctcgacg acagcgacta caccaccatc ggtggttacg tcttcggcca
      961 gctgggccga ctgccccgtc cgggagaccg ggtgcccgcc ggcacccaca ccctggaggt
     1021 ggtcgagatg gagggtcggc gggtgaaggc cctgcgcctg catccgcccg agccgactac
     1081 ccagcgcgaa cccgagtccc cggtcgcggg ccgggagagt cacgcgtcct gaggagcgtg
     1141 tccctgggat cccgggcgca accccgggca gagctgaaca ctgccctcct cgatctcggt
     1201 taccgcctgg ccggcgtccg gactcccgaa caggccgcgc gcatcatcgc ggccgtcgcc
     1261 caggacgtgc tggggtggga cgcctacagc ctggacctgt acgccgccga gaccggcacg
     1321 gtgcacgcgg tggtgagcat ggaccggatc ggcgacggcg atccggtgga cgtgccgcac
     1381 gcgcatccct tcgggcccgc cggggcgatg acgcgcaagg tggtgagcga aggcgcccag
     1441 ctgatcctgc gcggggtgtt ggagccgccg gccgaggggc tcactccgtt cggcgaggtg
     1501 agccgcccct cggcctcgct cctgttcgtg ccggtgcgcc acggcgagcg ggtcgccggc
     1561 atcctctcga tccagagcta cactccccag gcgtacgacg ccggcgatct cgccgtgctg
     1621 cagacgctgg cggaccactg cggcagcgcg ctcgagcgcc tccgcatcga ggcggcgctg
     1681 cgggagagtc aggtcctgct cgagcgggcg gagagcgccg cgctggtgat gacggcgcat
     1741 gtcggcctgg atggtcgcct actgaaggtg cccccccgac tctgcgagct gttgggctac
     1801 tccgaggcgg agctgcgcga gcgcaccgtg ctggagctgg cccatccgga cgacctcgcc
     1861 ctcatcggaa ccgagttgcg gaggctgctg agcgccgagg tccgctcctc cgacgacacg
     1921 gtccggctgg tccggcgtga cggcggcgtg gtctgggtct acgccaacag ctccccggtg
     1981 cagaccgcct ccggcgccac cctgtacttc ctggtgtacg tccgcgatgt caccgagcgg
     2041 aagcttctcg aggagcagtt gcgccaggcc cagaagatgg aggcggtggg ccagctcgcg
     2101 ggcggggtgg cgcacgactt caacaacctg ctcacggcca tcatcggcaa cgccgagctc
     2161 ttgctgcgcg tcatcgaggc ggaggacccc cggcggctcg acgtgctgga gatcaaccgc
     2221 gccgcgcacc gggcggccac tctggtgcgc cagctgctcg cgttcagccg gaagcaggtg
     2281 ctccagccgc gtgtggtgga cccgaacgtc gtggtgacgg agctgagcgc gatgctgcgg
     2341 cgcatcatcg gcgagcacgt cgagctccgg ctggagctgc agcccggcgt cggccgggtg
     2401 ctggcggatc ccggtcagct ggagcaggtg atcaccaacc tggcggtgaa cgccagagac
     2461 gcgatgcctt cgggcggcac gctcaccatc cgcacggcgg acgtggacgc cgacgacgtc
     2521 ccggtgcaga gtcccgagtc caccccgctc gtcgggccgc tggtggagct gagcgtgcgc
     2581 gacgacgggg tcgggatgga cgagcgcacg ctggcgcggc tgttcgagcc gttcttcacc
     2641 accaaggagc tgggccgcgg gaccggcctc ggactcgcca cggtgtacgg catcgtcagg
     2701 cagagcggcg ggcacatccg ggtgaacagc cggctgcacc atgggtccac cttcaccgtc
     2761 tatctgccga tggtcgaggg tgcgagcgag ggcgcggcgg cgccccctgt gtggagtgac
     2821 cagccccggg tggccggcac cgtgctggtg gtggaggacg aggcgacggt ccggccgctc
     2881 gcctgccggg tgctccgggc caggggctat cgggtgctcg aggcccgcgg gggggcggag
     2941 gcgctcgagc tggtggccga gcacgaggga caggtggatc ttctgctgac cgacatcatc
     3001 atgcccggcc tcggcggccc ggccctggcc cagcggctgc tccgggaggt tccgggcctg
     3061 aaggtgctgt acatcacggg gtactcggag gaggccataa ggcagcaggg catgctgccc
     3121 gccggcggcg cgctcctcga gaagcccttc accgcccacc agctggccga gcgggtgcac
     3181 gcggccctcg tcaggacgga gacctagatg cgcaacgttc cggccgcgac gcccccggga
     3241 tcgctcgatc tcacggggga cgccgcccgc cgccgtcgcg cgctccagcg gagcgccgtc
     3301 accgtgctgg agcaggcggg ctacgaggag ctgctgccgc ccaccttcga gtacgaggac
     3361 acgttcctcc gcgccggcgg gagcggggtg gccgagcggc tgctgcgctt tcccgatcgc
     3421 gatggccgga tcctggcgct ccgctatgac ttcacctcca gcatcgcgcg catcgccgcc
     3481 accaccttcg cgggggcgaa gcttccgctc cggctcagtt actccgggcg ggtgtatcgc
     3541 caggagccgg agcgcggcgg ccgcccccgg gagacgctgc aggtgggagc cgagctgctg
     3601 gggaacggct cgctcgaggc ggacgtggag atcgtgcggc tcaccatcgc gctcatccgc
     3661 gccgccggcc tggaggactt ccaggtcaac ctggggcacg tcggcgtgct cgcgcccggc
     3721 ctcgcggcgc tcgaggagcc ggtgcgcgcc caggtgcggc gctggatcga ccggaaggac
     3781 cggggcgggc tcacccgggc gctcgcgggg gagagcggcg atgcggcgac gctgctgcac
     3841 ctgccgttcg tgatcggccg gcgcgaggcc ctggaggcgg cgctcggcgt gacgccggtg
     3901 gcggcggtcg gcgggctgcg gcacctgctg gcgctcgacg acgccttggc gccgggcgag
     3961 cggggccacg tggtgtacga cctcggcgag gtgcgggggc tcgactatta caccggggtg
     4021 cacttcgagg tgttcgtctc cggcgccggc cgtgcggccg gggccggcgg ccgctacgac
     4081 gagctgatgg gacgcttcgg ccggccgatg cccgcggtgg gtgtctccat cgacctcgac
     4141 gccatcgccg aggtgccgct gtgagccggc tccgcgtggc gctcgccaaa ggccgactct
     4201 acgagccgtc ggtgcagcgg ttccgggccg cgggcatcga gcccgcgagc gacgcagggc
     4261 ggcgactcct gataccgtcc agcgaccccg cgatcgagtt cctggtggtg aagcccgccg
     4321 acgtgccggt gtacgtcgag tccggcgccg ccgacctggg catcaccggc accgacgtgc
     4381 tgcgcgagac cggcgcggac gtgctcgagc cgctggagct gggcttcggc tactgccgcc
     4441 tggtcgtcgc ctcgccggcc cggtcgcact atcccgagct cgagggtggc atcaccccgc
     4501 gcgtcgccac caagtacccc aggctggccc aggcccactt cgccgccgcg gggcgaccgg
     4561 tggacatcat ccaggtgaac ggctcggtcg aagtggcgcc gctgctgcga ctctcgcact
     4621 ggatcgtgga cctggtggac accggcaaca ccctccgggc caacgggctg gtcgagcggg
     4681 agacgatcct cgagtgcggg gcggtgctgg tcgcgaaccg ggcgagtcag aagctgaagc
     4741 tggaggatta tctgagggtg atggagcggc tggagcggaa ccgggggccg cgggacgcgg
     4801 tgtcaccctg agcgcagcga aggggaccag gcggcatggc ctccctcgct gcgctcagga
     4861 tgacagccga gctttcggtc acacccgcgc ccccccggtc cgcccggcca gctccaccgc
     4921 cagctcgatc gccgcccgca tgctcgacgc atccgccctt ccctgccccg cgatgtcgaa
     4981 cgccgtcccg tgatccggag acgtgcgggg aaacggcagg ccgagggtca cgttcaccgc
     5041 ccgtccgaac gcggccacct tgatggcggt catgcccacg tcgtggtagg gggcgagaac
     5101 ggcgtcgaac tcgcctcgca tcgcgcggag gaagacggta tcggcgggca gcgggccggc
     5161 cgccccgagg gctgcggccg cgggacgcag gacccgaggc tcttcgtcac cgaagaggcc
     5221 ggactcgccg gcgtgcgggt tgagggcgca cagcgccagc cgtggccgct cgaggcccca
//
LOCUS       DASUYN010000508         8241 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_604031, whole genome shotgun sequence.
ACCESSION   DASUYN010000508 DASUYN010000000
VERSION     DASUYN010000508.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8241)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8241)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8241
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_604031"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..973)
                     /locus_tag="VF061_09870"
     CDS             complement(<1..973)
                     /locus_tag="VF061_09870"
                     /inference="COORDINATES: protein motif:HMM:NF041359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine aldolase family protein"
                     /protein_id="HEX6669855.1"
                     /translation="MSLVSPVVDLYSDTVTRPTAAMRRFMCAAEVGDEQQLEDPTVNR
                     LQDLVAELLGKEAALFLPSGTMCNQVAFSVHCRAGDEIILHETAHPLLYEAGGAAALI
                     GAVFRPLPGQRGRFTAAQVREAVRPAVYYMPRSRVVSIEQTANIVGGVCWPLSEVEAV
                     AGAARDAGLAVHMDGARLMNAVVATDTPASAFGALVDSVWLDLSKGLGAPVGAVLAGS
                     RAFIEEAWIHKLRLGGAMRQAGIIAAAGLYALEHHVERLAEDHVRARALATGLAELPG
                     IALDAARVETNIVIFDVRATGLTGDQFAARTLASHGVRFSVIGPSTVR"
     gene            complement(970..2685)
                     /locus_tag="VF061_09875"
     CDS             complement(970..2685)
                     /locus_tag="VF061_09875"
                     /inference="COORDINATES: protein motif:HMM:NF028259.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669856.1"
                     /translation="MEVARAQPGIWTLLTPKWRSALARLRQEQRGSWARLLLFALVGG
                     VFWAAIFGIAFRVLSYIQRVEDIGDLLATKVLGIILLALLSILLLSNIITALSTYFLA
                     KDLDLLVAAPVGGSRLYLAKLTETVVHSSWMVALLALPIFTAYGIVYSGGPLFPLVAV
                     AAFLPFLVLPAVAGVVVTMILVNVFPARRTRELLGLIGLGALVTVVMLLRFMRPERLA
                     RPEGFDTFVDYLAELRTPTNPMLPSEWAADMVMNWLLRIADPRPVLLLWGAGLAAIAL
                     GALVHRGLYHSGFSKAQEGAERKVRRPLRGPLGAALRSMPAAKREFIYKDLRLFFRDN
                     TQWSQLFLLGVLLLIYIFNIKSLPIHSGERIPFSLVVVISFLNLGLAGFVLAAVAARF
                     IFPAVSLEGRQMWLLRSSPLDPEAMLWSKYWTGTVPLLVLAMAITVLTNWLLQAPPFM
                     MAVSLGTILLYTLAASALALSFGVFYPQFGTENAAQIPTSFGGVVYMMASLSLLALVI
                     MLEAQPVAQQLRAVHRGQELGVTPRLLFSGAAVVGILVAATILPLRLSAQRIERMEIA
                     SGGVE"
     gene            complement(2687..3445)
                     /locus_tag="VF061_09880"
     CDS             complement(2687..3445)
                     /locus_tag="VF061_09880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX6669857.1"
                     /translation="MIRLKDLTKRYGKFTAVDGISLEVPRGELFGLLGPNGAGKTTTM
                     RMIAGILQPTSGSIVVGGRDMLAQPLEAKARIGFIPDRPFVYDKLTGGEFLRFAAALY
                     GQDGPEVERRIDELLEVFDLGAWKHELTEAYSHGMRQKLIICGALVHRPELIVVDEPM
                     VGLDPKSARLLKDLFRQFVDRGGTVLMSTHTLEVAEVMCDRIAIVFKGRIAASGTMGE
                     LREQTESAELSLEDLFLKLTGGPRSPQLDAVLGR"
     gene            complement(3442..3939)
                     /locus_tag="VF061_09885"
     CDS             complement(3442..3939)
                     /locus_tag="VF061_09885"
                     /inference="COORDINATES: protein motif:HMM:NF013798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macro domain-containing protein"
                     /protein_id="HEX6669858.1"
                     /translation="MITVVVDDLAALAVDAVLRPAGESLEPAAAVSSRLDQAAGEGFA
                     DLRRVSSPLEAGAAVVTDGGNLVAPFVIHTVIRDSASPVARAKIRRALVSAWQQAGAW
                     GLARLAAPPVGADGGGLSLEDAVGLLVETFPRAGAGEAPAELCIVVERPEDREAAEAI
                     LGRSA"
     gene            4064..6892
                     /gene="uvrA"
                     /locus_tag="VF061_09890"
     CDS             4064..6892
                     /gene="uvrA"
                     /locus_tag="VF061_09890"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HEX6669859.1"
                     /translation="MVRGAREHNLKNISVAIPRNRLTVITGLSGSGKSSLAFDTIYAE
                     GQRRYVESLSAYARQFLGLMEKPDVDAIEGLSPAISIEQKTTGQNPRSTVGTVTEIYD
                     YLRLLWARAGVPHCPNDGTPVTRQSAAQITETVLGWPGETRIEVLAPMVRGRKGEFRE
                     LFEDVRKRGFVRVRVDGTTHDLGAVPALNRRQNHDIAVVVDRLVVRASDRGRLNDSIE
                     TALKTADGLVEVVRHDQGEHSVVFSERFACPVCGLSLPELEPRQFSFNSPFGACPDCH
                     GVGTRREVNAELILGDPSISILEGVVLPWGEPSGYLRKVVLPTLAKAFKFDLQAPWSQ
                     HSEPAKQALLHGAPGRFRFQTDGARGRSEYESEWEGILRNVERRYRESTSDAVRATLE
                     EFMVEQPCQTCGGKRLKPESLAVMVNGRSIGDVVDLPVERALEFFEAVPLRANGRQGL
                     DPEVAGPILKEVSDRLRFLRDVGLDYLTLGRGATSLSGGETQRIRLATQIGSRLVGVL
                     YILDEPSIGLHQRDNERLLGTLRGLRDLGNTVIVVEHDAETIEAADHVIDLGPRAGRF
                     GGEVVAEGPVDVIRRHPSSLTGRYLRAELRVPVPPGRRQAARGHRLRVVGARANNLRN
                     LTVDVPLGLFVAVTGVSGSGKSTLVTDILYQALARHFYRAKVIPGAHTRIEGLDRIDK
                     VIDIDQSPIGRTPRSNPATYTGLFTPIRELFTQLPDAKLRGYGPGRFSFNVKGGRCEA
                     CQGDGLVKIEMHFLPDVYVPCEVCKGRRYNRETLEVRYKGRSIADVLDLTVADALDFF
                     SHQRRIAEKLELLNDVGLGYIHLGQAATTLSGGEAQRVKLATELAKRDTGRTLYILDE
                     PTTGLHFEDVRLLLEVLHRLVDKGNSVIVIEHNLDVIKTADWIVDLGPEGGDGGGEIV
                     AEGTPEDVAAVDRSHTGRFLRRALGAPD"
     gene            7024..>8241
                     /locus_tag="VF061_09895"
     CDS             7024..>8241
                     /locus_tag="VF061_09895"
                     /inference="COORDINATES: protein motif:HMM:NF013123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DPP IV N-terminal domain-containing protein"
                     /protein_id="HEX6669860.1"
                     /translation="MNRSLVLILLVSLGLGIPVAAQQTDPSRLTVQRIYGSPEFAAQP
                     FGPSRWLGDGSAYTTVEPADGGGQDIVRYDVESDRREILVPARQLVPAGADGPLDIED
                     YAWSPDGTRLLVFTNTQPVWRLNTRGDYWILDRESGRLRQLGGPEAKPSTLMFAKFSP
                     DGRRVAYVRENNLYVEDLAGGGITALTADGSRTLINGTFDWVYEEELMNYYADGWRWS
                     PDGRSIAFWQLNADSVKNFHLINNTDSLYSRVIPIQYPKVGEINSAARVGVVSASGGP
                     TRWLEVEGDPRNHYIARMEWAASSAEVILQRLNRLQNRNEVMLGDARTGKVRTVLVEQ
                     DSTWVDLVDDLVWLDGGRSFTWVSDRDGWNHVYVVSRDGRKVRLVTKGDFDVLEVEGI
                     DPKGGWLYYVASPE"
BASE COUNT         1373 a         2878 c         2843 g         1147 t
ORIGIN      
        1 cccgaacggt ggaaggtccg atcacactga accggacgcc gtgggaggcc agggtccggg
       61 ccgcgaactg atcgccggtc agcccggtgg cgcgaacgtc gaagatcacg atgttggtct
      121 cgacccgcgc ggcatcgagc gcgatgcccg gcagctccgc aagtcctgtt gccagggcac
      181 gcgcccgcac atggtcctcg gccagtcgct ccacatggtg ctcgagcgcg tagaggccgg
      241 ccgccgcgat gatcccggcc tgccgcatgg ccccgccgag acgcagcttg tggatccacg
      301 cctcttcgat gaaggcccgc gagccggcca gcacggcgcc gaccggagct cccaagccct
      361 tgctgaggtc gagccagacc gaatccacca gggccccgaa tgcgctcgcg ggggtgtccg
      421 tagcgacgac ggcattcatc agccgggcgc cgtccatgtg caccgccagg cctgcgtcgc
      481 gcgccgcacc cgcgactgcc tctacttcgg acaagggcca gcagaccccg cccacgatgt
      541 tggccgtctg ctcgatggag accacccggc tgcgaggcat gtagtacacc gcgggacgca
      601 ctgcctcacg cacctgcgcg gccgtgaacc gcccccgctg gcccggcagg gggcggaaca
      661 ccgctccgat cagcgccgcc gctccgccgg cctcgtagag caacggatgg gcggtctcgt
      721 ggaggatgat ctcgtctccc gcccggcagt ggaccgagaa ggccacctgg ttgcacatcg
      781 tgcccgaggg caggaagagc gccgcctcct tgcccagcag ctccgccacc aggtcctgga
      841 gccggttgac ggtggggtcc tcgagctgct gctcgtcgcc cacctccgcg gcgcacatga
      901 aacggcgcat ggccgccgtg ggccgggtga cggtatcgct gtagaggtcc accaccggcg
      961 agaccaggct cattcgacgc cgccggaggc gatctccatg cgctcgatcc gctgcgcgct
     1021 gagccggagg ggaaggatcg tggcggcgac caggatgccg acgaccgccg cgccggagaa
     1081 caggagccgc ggcgtgacgc ccagctcctg cccccgatgg accgcgcgga gctgctgcgc
     1141 gaccggttgg gcctccagca tgatcaccag cgcgagcagg ctcaggctcg ccatcatgta
     1201 caccacgccg ccgaagctgg tgggaatctg ggccgcgttc tcggtcccga actggggata
     1261 gaacaccccg aacgacagcg ccagcgcact ggccgcgagc gtgtacagca ggatggtgcc
     1321 gaggctcacc gccatcatga agggcggggc ctggagcagc cagttggtca ggacggtgat
     1381 cgccatcgcc agcaccagca gcggcaccgt gcccgtccag tacttgctcc acagcatggc
     1441 ctcgggatcc agcggactgg accgcaacag ccacatctgc cgaccctcca gcgacaccgc
     1501 cggaaagatg aaccgcgcgg ccaccgcggc cagcacgaac ccggccaggc ccagattcag
     1561 gaaggagatc accacgacga ggctgaacgg gatccgctcc ccggagtgga tgggcagcga
     1621 cttgatgttg aagatgtaga tcagcagcag cacgccgagc aggaacagct gactccactg
     1681 ggtgttgtcg cggaagaaga ggcgcaggtc cttgtagatg aactcccgct tggcggcggg
     1741 catgctccgc agcgcggcgc ccagggggcc ccgcaacggg cgccgcacct tccgctccgc
     1801 tccctcctgc gctttggaga acccggaatg gtagagaccg cggtgcacca gcgcccccag
     1861 cgcgatcgcc gccaggcccg caccccagag cagcaggacc ggccgagggt cggcgatccg
     1921 gagcagccag ttcatcacca tgtcggcggc ccactcgctg ggcagcatcg ggttggtggg
     1981 cgtgcgcagc tccgccaggt agtccacgaa ggtgtcgaac ccctcgggcc gggccagccg
     2041 ctccggccgc atgaaccgga ggagcatcac caccgtcacc agcgccccca gcccgatcag
     2101 cccgagcagc tcgcgggtgc gccgggcggg gaagacgttc accaggatca tggtaacgac
     2161 gacgcccgcg acggccggca ggaccaggaa cggcaggaac gccgccacgg ccaccagcgg
     2221 gaacagcggc ccaccggagt acacgatccc gtaggccgtg aagatcggca gcgcgagaag
     2281 cgccaccatc caggaggagt ggaccaccgt ctcggtgagc ttcgcgagat acaggcggga
     2341 cccgccgacc ggagccgcga ccagaaggtc gaggtccttg gcgagaaagt aggtcgagag
     2401 cgcggtgatg atgttggaga gcagcaggat cgagagcaac gccagcagga tgatgccgag
     2461 gaccttggtg gcgagcaggt cgccgatgtc ctccacccgc tggatgtagc tcagcacccg
     2521 gaacgcgatc ccgaagatcg cggcccagaa caccccgccc accagcgcga acaggaggag
     2581 gcgggcccag gagccgcgct gttcctggcg cagacgggcg agcgcgctgc gccacttggg
     2641 ggtgaggagg gtccagattc ccggctgggc gcgtgcgacc tccacgtcag cgcccgagca
     2701 cggcgtcgag ctgcggcgag cgcgggccgc cggtcagctt gaggaacagg tcctccaggc
     2761 tcagttcggc cgactcggtc tgctcccgaa gctctcccat cgtgccgctg gcggcgatgc
     2821 gccccttgaa gacgatcgcg attcggtcgc acatcacctc ggccacctcg agggtgtggg
     2881 tgctcatgag caccgtgccg ccccgatcca cgaactggcg gaagaggtcc ttgagcaggc
     2941 gcgcgctctt gggatcgagc cccaccatcg gctcgtccac cacgatcagc tcggggcgat
     3001 gcaccagggc gccgcagatg atcagcttct gccgcatccc gtggctgtac gcctcggtga
     3061 gctcgtgctt ccaggcgccc aggtcgaaga cctcgagcag ctcgtcgatc cggcgctcca
     3121 cctcgggacc gtcctggccg tagagcgcgg cggcgaagcg caggaactcg ccaccggtga
     3181 gcttgtcgta gacgaagggg cgatccggga tgaagccgat ccgcgccttg gcctccaacg
     3241 gctgggcgag catgtcccgt ccgcccacca caatggagcc gctggttggc tggagaatcc
     3301 ccgcgatcat ccgcatggtg gtcgtcttgc cggcgccgtt ggggcccagc aggccgaaca
     3361 gctcgccgcg cggcacctcg agggagatcc catccaccgc ggtgaacttc ccgtagcgct
     3421 tcgtcaggtc cttcaaccgg atcacgccga cctccccagg atggcctccg ccgcctctcg
     3481 atcctccggc cgctccacca cgatgcagag ctcggccggc gcctcccccg cgccggcgcg
     3541 aggaaacgtc tccaccagca accccaccgc gtcctccaga ctgagcccgc ccccgtccgc
     3601 ccccacgggt ggcgcggcga gccgggccag tccccaggca ccggcctgct gccaggccga
     3661 caccagcgca cggcgaattt ttgcacgggc gacgggtgag gcggagtcgc gaatgaccgt
     3721 atggatcacg aatggtgcca cgaggttccc cccgtccgtc accacggctg cgccggcctc
     3781 cagcggggag gatacccggc gcaggtcggc gaaaccctcg ccggcggcct gatccaggcg
     3841 gctggacacc gccgccgcgg gctcgagcga ctcgcccgcg ggacgcagca cggcgtccac
     3901 cgccagcgcg gcgagatcgt ccaccacgac agtgatcact cgaccctggg ggatatgatc
     3961 atgagggcag gtgtatggta gaaacaggtc ggccaaacgg gaacccgttg accctcggca
     4021 acagcttcgg gtacctttcg gggctatggc tcaggaacac ctggtggtgc ggggcgcccg
     4081 cgagcacaac ctcaagaaca tctccgtcgc catcccccgc aacaggctga ccgtgatcac
     4141 cgggctctcg ggctcgggga aatcctcgct cgccttcgac accatctatg ccgagggcca
     4201 gcgccgttac gtcgaatcgc tgtccgcgta cgccaggcaa ttcctcggcc tgatggagaa
     4261 gccggacgtg gacgcgatcg agggtctctc gccggcgatc tcgatcgagc agaagacgac
     4321 cgggcagaac ccgcgctcca ccgtcgggac ggtcaccgag atctacgact atctccgtct
     4381 gctctgggcc cgggccgggg tcccgcactg ccccaatgac gggaccccgg tcacccggca
     4441 gagcgccgcg cagatcaccg agaccgtgct cggctggcct ggcgagaccc ggatcgaggt
     4501 cctcgccccg atggtgcggg gacggaaggg cgagttccgc gagctgttcg aggacgtgcg
     4561 caagcggggc ttcgtccggg ttcgggtgga cggcaccacc cacgatctgg gcgccgtccc
     4621 ggcgctgaac cgccggcaga accacgatat cgcggtcgtg gtggaccggc tcgtggtgcg
     4681 agcctccgac cgcggccggc tcaacgattc gatcgagacc gcgctcaaga cggccgacgg
     4741 gctggtggaa gtcgtccggc acgaccaggg cgagcacagc gtggtctttt ccgagcgctt
     4801 cgcctgcccg gtgtgcggcc tctcgctgcc ggagctggag ccgcggcagt tctcgttcaa
     4861 ctcccccttc ggcgcctgtc cggactgcca tggcgtcggc acccggcgcg aggtcaacgc
     4921 cgagctgatc ctcggcgatc ccagcatctc catcctggag ggcgtggtgc tcccctgggg
     4981 cgagccgtcc ggctacctgc gcaaggtggt cctgcccacg ctggccaagg cgttcaagtt
     5041 cgacctccag gcgccgtggt cgcagcactc cgagccggcg aagcaggcgc tgctgcacgg
     5101 cgctcccggc cggttccggt tccagaccga cggcgcgcgg ggccggagcg agtacgagag
     5161 cgaatgggag ggcattctcc ggaacgtgga gcgccgctac cgggagtcca ccagcgacgc
     5221 ggtgcgagcc acgctggagg agttcatggt ggagcagccc tgccagacct gcggcgggaa
     5281 gcggctcaag ccggagagcc tcgcggtgat ggtgaacggc aggagcatcg gggacgtggt
     5341 ggacctgccg gtggagcgcg cgctggagtt cttcgaggcc gtgccgctgc gcgccaacgg
     5401 ccggcagggg ctcgaccccg aggtggccgg gccgatcctc aaggaggtga gcgaccggct
     5461 ccgcttcctg cgggacgtgg ggctcgacta tctcaccctg ggccgcggcg cgacctccct
     5521 gtcgggcggc gagacgcagc gcatccggct cgccacccag atcggctcgc ggctggtggg
     5581 ggtgctctac atcctcgatg agccgagcat cggactccat cagcgcgaca acgagcggct
     5641 gctcggcacg ctgcgcgggc tccgcgacct ggggaacacg gtgatcgtgg tggagcacga
     5701 cgccgagacc atcgaggcgg ccgatcacgt gatcgacctc ggcccccgcg cgggacgctt
     5761 cggcggcgag gtggttgcgg aagggccggt ggatgtcatc cgccggcacc ccagctcgct
     5821 cacgggccgg tatctgcgcg ccgagctgcg ggtgcccgtt ccgcccggcc gacggcaggc
     5881 ggcccgcggc caccggctgc gggtggtggg cgcgcgggcg aacaacctgc ggaacctcac
     5941 cgtggacgtc ccgctcggcc tgttcgtcgc ggtcacgggc gtgtccggct cggggaagtc
     6001 caccctggtg accgacatcc tgtaccaggc gttggcccgg catttctacc gggccaaggt
     6061 cattcccggt gcccataccc ggatcgaggg gctcgaccgg atcgacaagg tcatcgacat
     6121 cgaccagagc ccgatcggcc ggacaccacg gtccaatccg gcgacctaca ccgggctgtt
     6181 cacgcccatc cgggagctct tcacccagct gcccgatgcc aagctccgcg gctacgggcc
     6241 gggacgcttc tccttcaacg tcaagggggg ccgctgcgag gcctgtcagg gcgacggcct
     6301 ggtgaagatc gagatgcatt tcctgcccga cgtctacgtg ccctgcgaag tgtgcaaggg
     6361 ccggcgctac aaccgggaga cgctcgaggt ccgctacaag ggccggagca tcgccgacgt
     6421 cctcgacctc accgtcgccg acgcgctcga tttcttcagc caccagcggc ggatcgccga
     6481 gaagctggag ctgctgaacg acgtgggcct gggctacatc catctcggcc aggcggcgac
     6541 caccctgtcg gggggcgagg cccagcgggt caagctggcg accgagctcg ccaagcggga
     6601 caccggccgc acgctgtaca tcctcgacga gccgacgacc gggctccact tcgaggacgt
     6661 gcggttgctg ctggaggtac tgcaccggct ggtggacaag ggcaacagcg tcatcgtgat
     6721 cgagcacaac ctggacgtca tcaagacggc ggactggatc gtggacctgg ggcccgaggg
     6781 cggggacggc gggggagaga tcgtcgcgga gggtactccg gaggacgtcg ccgccgtcga
     6841 tcgcagccac accggacggt tcctccggcg agcgctgggc gccccggatt gagtcgctga
     6901 aacctctcga cgcccgggtc cgaatggtgt gcccatgatc gggcggcggg acgcttcagc
     6961 gcgccgtccg gaccgggtac tttccagcgg cccgtcacca ccaccctcca cacgagtcct
     7021 gccgtgaatc gctccctcgt cctgatcctc ctggtctccc tgggcctcgg tatcccggtg
     7081 gccgcgcagc agaccgaccc ttcacgcctc acggtccagc ggatctatgg ttcgcccgag
     7141 ttcgcggccc agccgttcgg gccgtcccgc tggctcggtg acggcagcgc gtacaccacg
     7201 gtggagccgg cggacggcgg gggacaggac atcgtccgct acgacgtgga gagcgaccgg
     7261 cgcgagatcc tggtgccggc ccgccagctg gtaccggccg gcgcggatgg accgctggac
     7321 atcgaggact acgcctggtc gccggacggg acgcggctgc tggtcttcac caatacccag
     7381 ccggtctggc ggctcaacac ccgcggagat tactggatcc tggaccgcga gagcggccgg
     7441 ctccggcagc tcggcgggcc ggaggccaaa ccctccacgc tgatgttcgc caagttctcg
     7501 cccgacggca gacgcgtcgc ctacgtccgg gagaacaacc tgtacgtgga ggacctcgcc
     7561 ggcgggggca tcaccgcgct cacggccgac ggctcccgca cgctcatcaa cggcacgttc
     7621 gactgggtgt acgaagaaga gctgatgaac tactacgccg acgggtggcg ttggagcccg
     7681 gacggacgca gcatcgcctt ctggcagctc aacgccgact cggtgaagaa cttccacctg
     7741 atcaacaaca cggattcact ctactcccgg gtcatcccga tccagtatcc caaggtggga
     7801 gagatcaact ccgccgcgcg ggtcggcgtg gtgagcgcct ccggcgggcc gacccggtgg
     7861 ctcgaggtcg aaggggatcc ccggaaccac tacatcgccc ggatggagtg ggccgcctcg
     7921 tccgcggagg tcatcctcca gcggctcaac cggctccaga accggaacga ggtgatgctg
     7981 ggcgacgcga ggacggggaa agtgcggacc gtactcgtgg agcaggactc cacctgggtg
     8041 gacctggtgg acgacctggt gtggctcgac gggggcagga gcttcacctg ggtgagcgac
     8101 cgcgacgggt ggaaccatgt gtacgtcgtg tcacgggacg gccggaaggt ccgcctcgtc
     8161 accaagggcg atttcgatgt cctcgaggtg gagggcatcg atccgaaggg cggctggctc
     8221 tactatgtcg cctcgccgga g
//
LOCUS       DASUYN010000509         4024 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1928501, whole genome shotgun sequence.
ACCESSION   DASUYN010000509 DASUYN010000000
VERSION     DASUYN010000509.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4024
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1928501"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1078)
                     /locus_tag="VF061_09900"
     CDS             complement(<1..1078)
                     /locus_tag="VF061_09900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669861.1"
                     /translation="MSAADALTTAAARPGRRGGMIRRVAGYSAMRASAEGLVGLRGLL
                     LAALLGPAAFGSWALLRLGTRYAALAGLGVFRGLEVELLHGAERRDGAIAGRSEPAGA
                     ALGFVLAVSGALAAAALVASALVVSPTQRLILQGFAGAVVAEAVYGYVLVYTRVRATL
                     LRYALLEAGTAALHLVLGLALAHTFGLAGAFAALALSAALGVLVASRWVELRPRLDAA
                     AVRGMLGIGLPVALTGALGTLLLTADRWVVAAWGGQELLGYYAFGAALASAGAALALA
                     VRTVVFPQVYGDARLTGAAAALQRHLERSLMPFATLVPPVLGAVGALVAPAVELLVPQ
                     YAPAIAPARLFLLSGAAAGLVNLAT"
     gene            complement(1057..1731)
                     /locus_tag="VF061_09905"
     CDS             complement(1057..1731)
                     /locus_tag="VF061_09905"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX6669862.1"
                     /translation="MSPAPLAKYVADLASLPGDAALGYRNEGLHGVWEAVATRTVHRV
                     VRASRLRVFAQTLESIPDVAAPSGINITRVRLEDVEALGPIAGERERVRFRRLLEIGC
                     IGLAAWRSERPVGYAWVALEMRPEVSLCPLELPAHAAYLWDLYVVPAERGSGVGSALA
                     AERLRVARAHGRTEGWRMIAPDNTASLHTLRRSGAPPRVVGEIRYLKLGPRLFARFTP
                     CPPPTH"
     gene            complement(1728..2897)
                     /locus_tag="VF061_09910"
     CDS             complement(1728..2897)
                     /locus_tag="VF061_09910"
                     /inference="COORDINATES: protein motif:HMM:NF016242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidogalycan biosysnthesis protein"
                     /protein_id="HEX6669863.1"
                     /translation="MIAAAVASPWTAGPLAGAAALSETEWNGLTRRGFHLHQWFRAAE
                     DAGWRPRHVVAREGGEARAVFPVYLTGAETPHDLHERWLGPLRGLERIGLGLRPALSV
                     QAPFSLTSDVLGDVKSLPRPVLHRVFELLEDTAASEGAKAVVWPFVDPADEAVIAVAR
                     ERGYAVVPAGATARLRVWWETFDDYVASRSKSVRRTIRADLAALEAAGLESGSSADFR
                     NRAEAMDLLYRAAYRRRNGRDARVAAGWFQRLAAEPTPQIVALLTSSGGRLAGTSLNL
                     AAGAVLDGTFAAFGPREHGGPAYLNDLVYEPIRLACARGIGTIDLGMSALYPKVLRGA
                     RLRRRVALVRGFGPAMHQVLAALGAVVARRQEAKERRMLGALWGTRCYEDGEDLP"
     gene            complement(2894..3883)
                     /locus_tag="VF061_09915"
     CDS             complement(2894..3883)
                     /locus_tag="VF061_09915"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX6669864.1"
                     /translation="MRSAAAVEERLLVPTYASRWSPLTVAAHRVLALPLQLWGPMRRR
                     VVESGGREITVLEIGRAKVTEVVCARLFGELPAPEYGASRSLRDPGAAAGGAHLVVAE
                     VHRWLAPRFRRAGWIVVPDQVRWEGDLAMLPPPAASHSLKNDLRKLRSRGFTLEHAGG
                     AADWQEFTTRMLAPHARSRFGDAAWLPSPYLLRRFRERGRLHFVILNGARVGGLCSLR
                     CGRTLWLPIGGVRDGDPALLRAGVSGAAYALGFEWGRRQGCTRVDVGRTSPFLNDGVQ
                     QYKRKWGLTAVADPLAHLTAVWAGSDAARLAFAREPVLAEGDEGLWLYAGGGL"
BASE COUNT          592 a         1589 c         1450 g          393 t
ORIGIN      
        1 cggtggccag gttcaccagg ccggccgcgg cgcccgagag gaggaagagc ctcgccggcg
       61 cgatcgccgg ggcgtactgg gggaccagca gctccaccgc cggggcgacg agggccccga
      121 cggcgccgag caccggggga accagggtgg cgaacggcat gagcgaccgc tccaggtgcc
      181 gctgcagcgc ggccgcggcg cccgtcagtc tggcgtcgcc atagacctgg gggaacacca
      241 ccgttcgcac cgccagcgcc agcgcggcgc cggcgctggc gagcgccgcg ccgaacgcgt
      301 agtaccccag cagctcctgg ccgccccagg ccgccaccac ccagcgatcg gccgtcagga
      361 gcagcgtccc gagggcgccc gtgagcgcga cgggcaaccc gatgccgagc atgcctcgca
      421 cggccgcggc atccagcctg gggcgcagct ccacccaccg cgacgcgacc agaacgccca
      481 gcgcggcgga gagggcgagc gcggcgaacg cgccggccag accgaacgtg tgcgccaggg
      541 ccaggccgag cacgagatgg agcgcggcgg tgcccgcctc cagcagggcg tagcggagca
      601 gcgtggcacg gaccctggtg tacaccagca catacccgta gaccgcttcg gccacgaccg
      661 cgccggcgaa cccctggagg atcagccgct gggtcggcga cacgaccagc gcgctcgcca
      721 ccagcgcggc ggcggcgagc gccccggaca ccgcgagcac gaaccccagc gcggcacccg
      781 cgggctccga gcgcccggcg atcgcgccgt cccgcctctc cgccccatgg agcagctcga
      841 cctcgagccc gcggaacacc ccgagcccgg cgagcgcggc ataccgggtg ccgaggcgca
      901 acaacgccca gcttccgaac gccgcggggc cgagcagcgc ggccagcagg aggccgcgga
      961 gaccgacgag cccctccgcc gacgcgcgca tggcggaata gccggcgacc ctccggatca
     1021 taccgccgcg gcgcccgggc cgcgccgcgg cggtggtcag tgcgtcggcg gcggacacgg
     1081 cgtgaaccgg gcgaacagcc tggggcccag cttgaggtag cggatctcgc ccacgacgcg
     1141 gggaggtgct ccgctccggc ggagcgtatg gagcgacgcc gtattgtcgg gggcgatcat
     1201 ccgccaccct tcggtccggc cgtgtgcgcg ggcgacgcgc agccgctcgg ccgcgagcgc
     1261 cgagcccacg ccactgcccc gctccgccgg cacgacgtag agatcccaca ggtacgcggc
     1321 gtgcgcgggc agctccagcg ggcacaggct cacctcgggc cgcatctcga gcgccaccca
     1381 cgcgtagccc accggccgct cgctccgcca cgccgcgagc ccgatgcagc cgatctccag
     1441 caggcggcgg aaccgcaccc gctcgcgctc gcccgcaatg ggaccgaggg cctcgacgtc
     1501 ctccaggcga acccgggtga tgttgatgcc ggaaggggcc gccacgtcgg ggatgctctc
     1561 cagcgtctgc gcgaacaccc tgagccggct ggcgcgaacc acccgatgga ccgtgcgggt
     1621 ggccacggct tcccacaccc cgtgcagccc ctcgttccgg tagccgagcg cggcgtcacc
     1681 cgggaggctg gcgagatccg cgacgtactt cgcgagcgga gcggggctca cggcaggtcc
     1741 tcgccgtcct cgtagcatcg ggtcccccag agggcgccga gcatgcggcg ctccttcgcc
     1801 tcctgccgcc gcgccaccac cgcgcccagc gccgcgagca cctggtgcat ggccggcccg
     1861 aacccccgca ccagcgcgac ccgccggcgt agccgggccc cgcggagcac cttgggatag
     1921 agcgcgctca tgcccaggtc gatggtgccg atcccgcggg cgcaggcgag ccggatgggc
     1981 tcgtagacca gatcgttgag gtaggccgga ccgccgtgct cccggggccc gaaggccgcg
     2041 aaggtgccgt ccagcacggc gccggcagcc aggttaaggc tggtgcccgc gagccggcct
     2101 ccgctcgagg tgagcagggc gacgatctgc ggcgtgggct cggcggcgag ccgctggaac
     2161 cagcccgcgg cgacccgggc atcgcgaccg ttccgccgcc ggtaggccgc gcgatacagc
     2221 aggtccatcg cctccgcccg gttccggaaa tcggcgctgg agccgctctc cagcccggcc
     2281 gcctcgaggg cggcgagatc cgcccgaatg gtgcggcgca ccgacttgct gcggctggcg
     2341 acgtagtcgt cgaacgtctc ccaccagacc cggagcctgg ccgtcgcgcc cgcgggcacc
     2401 accgcgtagc cccgctcgcg ggccaccgcg atcaccgcct cgtcggcggg gtccacgaac
     2461 ggccagacga cggccttggc tccctcactc gcggccgtgt cctccagaag ctcgaagacc
     2521 cggtggagca cgggccgcgg cagcgacttc acgtcaccca ggacatcgga ggtgagggag
     2581 aagggggcct gcaccgagag ggcgggccga aggccgagac cgatccgctc cagtccgcgc
     2641 agcggtccga gccagcgctc gtgcaggtcg tggggcgtct cggctccggt gaggtacacc
     2701 gggaagaccg cacgagcctc cccgccctcc ctcgccacca cgtggcgggg gcgccagccc
     2761 gcgtcctcgg cggcgcggaa ccactggtgg agatggaagc cccgccgcgt gagcccgttc
     2821 cactcggtct cggacagcgc ggcggcgccg gcgagtggcc cggcggtcca cggcgaggcc
     2881 acggccgcgg cgatcacagc ccacccccgg catagagcca gagcccctcg tcgccttccg
     2941 ccagcaccgg ttcccgggcg aaggcgaggc gcgcggcatc ggagccggcc cacacggcgg
     3001 tcagatgcgc cagcgggtcg gccaccgcgg tcagccccca cttccgcttg tactgctgga
     3061 cgccgtcgtt gaggaacggc gacgtgcggc ccacgtccac cctggtgcac ccctgccgcc
     3121 ggccccactc gaagccgagc gcgtacgccg cccccgacac gccggcccgg agcagcgcgg
     3181 ggtcgccgtc gcgcacgccg ccgatgggca gccacagcgt cctgccgcag cgcagcgagc
     3241 agaggccgcc gaccctcgcg ccgttcagga tcacgaagtg gagccgtccc cgctcccgga
     3301 accgccgcag cagatacggc gacgggagcc acgcggcgtc gccgaagcgg gaccgggcgt
     3361 gcggggccag catccgggtg gtgaactcct gccagtccgc ggcaccgccg gcgtgctcca
     3421 gggtgaagcc ccgcgaccgc agcttacgga gatcgttctt caggctgtgc gaggcggccg
     3481 ggggcgggag catcgcgagg tcgccctccc agcgcacctg gtcgggcacc acgatccagc
     3541 cggcgcggcg gaacctgggc gccagccagc ggtgcacctc cgccaccacg aggtgggcgc
     3601 caccggccgc ggcgcccggg tcgcggaggg agcgcgaggc gccatactcc ggcgcgggca
     3661 gctcaccgaa cagccgggcg cacaccacct ccgtcacctt ggcgcggccg atctccagca
     3721 ccgtgatctc gcggccgccc gactccacca cccgccgccg catcggtccc cacagctgga
     3781 gggggagcgc cagcacccgg tgcgcggcga cggtgagcgg cgaccagcgc gaggcgtagg
     3841 tcggcaccag gaggcgctcc tccaccgccg cggcgctacg caccggcggc ctcctcccac
     3901 gggctcggcc gccgggtcca gcccacctcc ggcacccgga gcaggaaaca ctcgtcgcag
     3961 aacttgaccc gccggcagcc ggtcctccag caggcgatgc gaccccggcg cgcgagcacc
     4021 agcc
//
LOCUS       DASUYN010000510         2483 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_823130, whole genome shotgun sequence.
ACCESSION   DASUYN010000510 DASUYN010000000
VERSION     DASUYN010000510.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2483)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2483)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2483
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_823130"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..209
                     /locus_tag="VF061_09920"
     CDS             <1..209
                     /locus_tag="VF061_09920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669865.1"
                     /translation="GFALNVTTDLDLFDLIVPCGIPQLVMTSVAAELLREGDAQVMPM
                     VRERVVGAFCDVFGTSVVAHTGTL"
     gene            247..852
                     /locus_tag="VF061_09925"
     CDS             247..852
                     /locus_tag="VF061_09925"
                     /inference="COORDINATES: protein motif:HMM:NF012401.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite oxidase-like oxidoreductase"
                     /protein_id="HEX6669866.1"
                     /translation="MPDATNPRLPPGQIVTKKWPVLHYGTVPSVDLSTWRFGVRGAVE
                     RPLEIGWEELNGLPRHEVACDIHCVTRWSRYDNVFGGVPVQVLLRRAGVRPEGRFALV
                     HAEHGFTTNLPLEDLDRPENLLALTHDGEPLTPEHGGPVRLLVPHLYFWKSAKWVKGI
                     EILEEDYPGFWEQNGYHMRGDPWTEERFGRPDPVRMRRGPR"
     gene            900..1454
                     /locus_tag="VF061_09930"
     CDS             900..1454
                     /locus_tag="VF061_09930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669867.1"
                     /translation="MAESPRRPAPQAQAEERIREILRAADSWAREAPKALMPAIRAVC
                     IRLAEMVADQRHYLAPLPEPQESERRAVLTMVADKLRSREVTAGVEDHLKGLEELELR
                     STGSWATVASAQNEWITTAIRYLEGCVAKLPADERPDSYWADDVVAGIIASARALIGV
                     DELHARTEARYSGPMKRVTPEEEL"
     gene            complement(1451..>2483)
                     /locus_tag="VF061_09935"
     CDS             complement(1451..>2483)
                     /locus_tag="VF061_09935"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX6669868.1"
                     /translation="PLNVHFIFEGEEECGGRVIFDLLRAEPERTRADAVLVCDSSFFA
                     PGLPAVYTALRGLCYAEISVRTLQRDLHSGTYGGVAPNALETLVRILSRLKSADGEIR
                     IPKLYKAVEKPSRRELKAWRKLPFDEEAFLREEVTGRALTGLEDYSPLERTWALPTFE
                     IHGIRGGFVGDGAKTVIPAHAVAKVSLRLVPGQRYEKVGRQLQRAIERLAPSWAEVNV
                     TLLHGGDPVEISVDHPAFGVLDDAFEEVVGRRAVPVRAGGSIPIVPELGLTGAPVILT
                     GIGLPDDGLHSPNEKLDLGQLWTGIRVFGRFFELFAERGGGAELGGEKGEGDEVEEGG
                     AEREAVETV"
BASE COUNT          373 a          900 c          848 g          362 t
ORIGIN      
        1 acggcttcgc cctcaacgtg accaccgacc tcgacctgtt cgacctcatc gtcccctgcg
       61 ggatcccgca gctggtcatg accagcgtgg ccgccgagct gcttcgggag ggggacgccc
      121 aggtcatgcc gatggtccgg gagcgggtcg tgggtgcctt ctgcgacgtc ttcggtacgt
      181 ccgtcgtcgc ccacacggga accctgtagc cggcggcggc gttccgaccc cattcaccac
      241 cgagccatgc ccgacgccac caaccctcgc ctgccacccg gacagatcgt caccaagaag
      301 tggccggtgc tccactacgg gaccgtgccc agcgtggatc tctccacctg gcgtttcggg
      361 gtgcggggag cggtggagcg gccgctcgag atcgggtggg aagagctcaa cggactgccc
      421 aggcacgagg tcgcctgcga catccactgc gtgacccggt ggagccgcta cgacaacgtc
      481 ttcgggggcg tgccggtgca ggtgctgctg cggcgcgcgg gcgtccggcc ggagggccgg
      541 ttcgccctgg tgcatgccga gcacgggttc accaccaatc tgccgctgga ggacctcgac
      601 cgcccggaga acctcctcgc gctcacccac gacggcgagc cgttgacccc ggagcacggc
      661 gggcccgtgc gtctcctggt cccgcacctg tatttctgga agagcgcgaa gtgggtgaag
      721 gggatcgaga tcctggagga ggactacccc ggattctggg aacagaacgg ctaccacatg
      781 cgcggcgacc cctggaccga ggagcgcttc gggcgccccg atccggtcag gatgcggcgc
      841 ggtccgaggt agcccgcccg cgcttgcctt tccaacccca cccggttttt ctgtctatca
      901 tggcagagtc accgcgccgc cccgcccccc aggcgcaggc ggaagagcgc atccgggaga
      961 tccttcgtgc cgccgacagc tgggcccggg aggcccccaa ggcgctgatg ccggcgatcc
     1021 gggcggtctg tatcaggttg gcggagatgg tcgcggacca gcggcactac ctggccccgc
     1081 tgcccgagcc gcaggagagc gagcgccggg ccgtcctgac catggtggcg gacaagctcc
     1141 gctcgcggga ggtcacggcg ggcgtggagg accacctgaa ggggctcgag gagctggagc
     1201 tgcgctccac ggggtcctgg gccaccgtcg cctcggccca gaacgagtgg atcacgaccg
     1261 cgatccgcta tctcgagggg tgcgtcgcca agctgcccgc cgacgagcgt ccggattcct
     1321 actgggccga cgacgtcgtg gccggcatca tcgcctcggc ccgcgccctg atcggcgtgg
     1381 acgagctgca cgcccgcacg gaggcccgct actccggccc gatgaagcgg gtgacgcccg
     1441 aggaagagct ttaaaccgtc tccaccgcct cccgctccgc gccgccctcc tccacctcgt
     1501 cgccttcccc cttctcgccg cccagctcgg ccccaccgcc ccgctcggcg aacagctcga
     1561 agaatcgccc gaacacccgg atgccggtcc acagctgccc caggtccagc ttctcgttgg
     1621 gcgagtggag cccgtcgtcg ggcaggccga tgccggtgag gatcaccggg gctccggtga
     1681 ggcccagctc gggcacgatc gggatcgagc cgccggcccg caccggcacc gcccggcggc
     1741 ccaccacctc ctcgaaggcg tcgtccagca cgccgaaggc cgggtgatcc accgagatct
     1801 ccaccggatc cccaccgtgc agcagggtga cgttgacctc ggcccaggac ggcgcgaggc
     1861 gctcgatggc tcgctggagc tggcggccca ccttttcgta gcgctggccc ggcaccagcc
     1921 gcaggctcac cttggcgacc gcgtgcgccg ggatgaccgt cttggcgccg tcgcccacga
     1981 agccgccgcg gatgccgtgg atctcgaagg tggggagtgc ccaggtgcgc tccagcgggc
     2041 tgtagtcctc gagtccggtg agtgcccgac cggtcacctc ctcccggaga aaggcctcct
     2101 catcgaaggg aagcttgcgc caggccttga gctcgcgcct ggagggcttc tccaccgcct
     2161 tgtagagctt gggaatccgg atctcgccgt cggcgctctt gagtcggctc aggatccgga
     2221 ccagggtctc cagggcattc ggtgcgaccc cgccgtaggt gcccgagtgg aggtcccgct
     2281 ggagggtgcg gaccgagatc tcggcatagc agagaccgcg gagcgcggtg tagaccgccg
     2341 gcagcccggg agcgaagaac gagctgtcgc agacgagtac cgcgtcggcc cgggtccgct
     2401 ccggctccgc ccgcagcagg tcgaagatca cccggccacc gcactcctcc tcaccctcga
     2461 agatgaagtg gacattgagc ggg
//
LOCUS       DASUYN010000511         4301 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1929537, whole genome shotgun sequence.
ACCESSION   DASUYN010000511 DASUYN010000000
VERSION     DASUYN010000511.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4301)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4301)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4301
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1929537"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            92..991
                     /locus_tag="VF061_09940"
     CDS             92..991
                     /locus_tag="VF061_09940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669869.1"
                     /translation="MARASGETAGAISLDANRAPALELYLPVPEHRAAWAGDERILVA
                     TTADEREAPVAFSPTGERFLLSPTTPPDVPVLALVPVETDFDRNSRVAGFLGEGGGTA
                     TPPPGLYMTNSHLVETFESWVKGAPEIEVHMLGQAGTSDSLTTYACAAEPSAGYYRFD
                     QNSLTWSGSVLLMSQTQLSNYKKAHPNQNLRVFFVEDDDTSCQIKVDPARFANLVKAV
                     EAIYPMLAGGRDSTNGILKIFKKANALQRLIKAVASVIRTDDELIGNAVESTVVGESY
                     PNANWVIKGDANKTNGWIKLVMK"
     gene            1063..1671
                     /locus_tag="VF061_09945"
     CDS             1063..1671
                     /locus_tag="VF061_09945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669870.1"
                     /translation="MRLRSSLLIPLLAAAPPLTAQTPAHHGWRLGAGVDALRFGHVAV
                     GGAAPGVAVELRPSGRSALHLAVGRSAGSWDVSLEVGWADGDIEARNDAFALRDLTAG
                     VTRYRVSPAVGRRLGSIGPGAITVELAPTLDLWSVSGDSRLRAGAEGRLVLQVPLGSV
                     DLEHRLGFGLSGSPIETADVGEVADERGLRTLLIGLGVRTRL"
     gene            complement(1682..2194)
                     /locus_tag="VF061_09950"
     CDS             complement(1682..2194)
                     /locus_tag="VF061_09950"
                     /inference="COORDINATES: protein motif:HMM:NF024183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HEX6669871.1"
                     /translation="MLLETLAAVLVGLLGLFAVLRPLIWPPPPAEPVFEPVEQEETPR
                     GVALLALKDIEFDRETGKLSDEDYRFLKEKYTAQAIEALRAEEGTGAPDDVEALVAHR
                     VRALRSAAATAPPGAPVCPTCGPRPEPDAVFCSTCGGKLFAAATCAHCGTALTADSRF
                     CEGCGSRVAA"
     gene            complement(2194..2802)
                     /locus_tag="VF061_09955"
     CDS             complement(2194..2802)
                     /locus_tag="VF061_09955"
                     /inference="COORDINATES: protein motif:HMM:NF015853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis protein CcmH"
                     /protein_id="HEX6669872.1"
                     /translation="MTNQSRRTFLGSLGAAVLLPLQQAQGPLAGQGEVGTLRDPMAAG
                     RPRAPTEIADYDERIKTIEHRLACTCGCTLDIFTCRTTDFTCTYSPQLHREVVDLDRA
                     GKTAQEILDAFVAKYGEKALMAPKPEGFNLWGYLLPGSAILLAGGALAAFITRRKVAG
                     MEADAPASSGPSLAAPAAEPPAVTATPEEMERLRRALAEVED"
     gene            complement(2799..>4301)
                     /locus_tag="VF061_09960"
     CDS             complement(2799..>4301)
                     /locus_tag="VF061_09960"
                     /inference="COORDINATES: protein motif:HMM:NF027651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis CcmF C-terminal
                     domain-containing protein"
                     /protein_id="HEX6669873.1"
                     /translation="GYISITIPFAFAIAALMSRSLDTGWIHAIRRWTLVSWLFLSIGI
                     TLGMWWAYVELGWGGYWAWDPVENASLLPWLTMTAFLHSVMIQEKRGMLKRWNLGLIV
                     GTFLLSIFGTFITRSGVIASVHSFTQSNVGYFFLAFLVVCGVLSFTLLYTRWPSLKAD
                     VQLESVVSREAAFLFNNLLLVGVAFSVLWGTLFPILSELVRGSKITVGPPFFNRVNVP
                     IGLLLLALTGVGPLIAWRKASPGNLRRQFIWPVTTGVVTAVALVAAGMRGLYPVMALG
                     LAGFVTGTIVQEFYRGVRARRRMHGESAPLAFARLVARNRRRYGGYLVHAGIVIYFVG
                     FSGMAFKREIEATLKPGQSATLASPFGHTYTFTHVGVSQFEALNRIVSAATVQVAKDG
                     RPTGLMSSEKRQHVDSFRRPTFEPSTEVGIRSDLQEDVYITYAGSVAGTEEAVYRFTI
                     NPLVWWVWFGGFVLAFGGLVTMWPGGGATVTTPRRAVAQPRLAGVGAGIE"
BASE COUNT          718 a         1486 c         1473 g          624 t
ORIGIN      
        1 gacaaagcgg aggggcggct ggttcggcag tcgtagttcc acgacggcgt caggaggggc
       61 ggcctgggac ggggggggcg caagcagcgc gatggccagg gcctcgggtg aaaccgctgg
      121 ggccatctcg ctggatgcga accgcgcgcc ggcgctcgag ctgtatctcc ccgtgccgga
      181 gcaccgcgcg gcgtgggcgg gcgacgagcg catcctggtc gccaccaccg ccgacgaacg
      241 ggaagcgccg gtggccttct cgcccacggg cgagcgattc ctcctcagcc ccacgacgcc
      301 gccggacgtc ccggtgctcg ccctcgtgcc cgtagagacc gacttcgacc ggaactcgcg
      361 ggtggccggg tttctgggcg aggggggagg cactgccaca cccccacccg ggctgtacat
      421 gacgaactcg cacctggtcg agaccttcga aagctgggtg aagggcgcgc ccgagatcga
      481 ggtccacatg ctgggccagg ccggcaccag cgactcgctg acgacctacg cgtgtgccgc
      541 ggagccttcg gccgggtact accggttcga ccagaactcc ctgacctgga gcggcagcgt
      601 tctgctgatg agtcagaccc agctgagcaa ctacaagaag gcgcacccca accaaaacct
      661 gcgggtgttc ttcgtggagg atgacgatac ctcatgccag atcaaggtgg atccggcacg
      721 gttcgccaat ctggtgaagg ccgtggaggc gatctacccg atgctcgccg gtggcaggga
      781 cagcaccaac ggaatcctga agatcttcaa gaaggccaac gccctccagc ggctgatcaa
      841 ggccgtggcc tcggtgatcc ggaccgacga cgagctgatc ggcaatgcgg tggagagcac
      901 ggtggtggga gagtcatacc ccaacgcgaa ctgggtaatc aagggtgatg ccaacaagac
      961 caacggctgg atcaagctcg tgatgaagta gctccgcggc cgcttgacga tcggttgatg
     1021 ggaagccctc agattcccca tccatcatct cacggtcccc gcatgcggtt gcgctcctcc
     1081 ctcctgatcc ccctcctggc ggccgctccg cccctcaccg cccagacccc ggcccaccat
     1141 ggctggcgtc tgggcgccgg cgtggatgcg ctgcgcttcg gccacgtggc cgtgggtggg
     1201 gccgctcccg gcgtggcggt cgagctgcgc ccctccgggc gctcggcact tcacctggcc
     1261 gtcggtcgct cagccgggtc gtgggacgtg tcgctggagg tggggtgggc ggacggtgac
     1321 atcgaagcca ggaatgacgc cttcgccctg cgggacctca cggcgggggt gacccgctat
     1381 cgagtctcgc cggcggtcgg gcggcgactc ggatccatcg ggccaggcgc aatcaccgtg
     1441 gagctcgccc ctacgctcga tctgtggtcg gtaagtgggg acagccgcct ccgcgccggc
     1501 gcggagggcc gcctggtgct ccaggttccg ctgggctcgg tggacctgga gcaccggctg
     1561 ggcttcggcc tctcgggaag tccgatcgaa acggcggatg tcggggaggt cgcggacgag
     1621 cgcgggctgc gaacgttgct gatcggactc ggggtgagaa cccgactcta gccgcggctg
     1681 gctaggcggc cacccggctc ccgcagcctt cgcagaaccg gctgtcggcc gtgagtgcag
     1741 tgccgcagtg ggcgcaggtc gcggcggcga acagcttgcc gccgcaggtg gaacagaaca
     1801 ccgcgtccgg ctccggccgc gggccgcagg tgggacacac gggagcgccc ggcggcgccg
     1861 ttgccgcagc ggagcgaagg gctcgaaccc tatgagcgac cagggcttcg acgtcgtcgg
     1921 gcgcccctgt cccctcctcg gcgcggaggg cctcgatcgc ctgggccgtg tacttctcct
     1981 tcaggaaccg atagtcctcg tccgagagct tgcccgtctc ccgatcgaac tcgatatcct
     2041 tcagcgccaa cagcgccacg cccctcggag tctcctcctg ctccaccggc tcgaacaccg
     2101 gctcggcggg tggcggcggc cagatgagcg gccgcaggac ggcgaacagg cccagcaggc
     2161 ccaccagcac cgccgccagc gtctccagca gcatcagtcc tccacctccg ccagcgcacg
     2221 ccggagccgc tccatctcct cgggcgtagc cgtgaccgcg ggcggctcgg cggccggcgc
     2281 cgcgaggctg ggacccgacg atgccggcgc gtccgcctcc atccccgcca ccttccgccg
     2341 cgtgatgaac gccgcaaggg cgccacctgc cagcaggatc gcggagccgg ggagcaggta
     2401 gccccagagg ttgaaaccct cgggcttcgg ggccatcagc gccttctcgc cgtacttggc
     2461 gacgaaggcg tccaggattt cctgggccgt cttgcccgcc cggtcgaggt ccaccacctc
     2521 ccgatgcagc tggggagagt aggtgcaagt gaaatccgtg gtgcggcagg tgaagatgtc
     2581 gagggtacaa ccgcaggtgc aggcgagccg gtgctcgatg gtcttgatcc gctcgtcgta
     2641 gtcggcgatc tcggtgggcg cgcgcggccg gccggcggcc atggggtccc ggagcgtacc
     2701 gacctcgccc tggcccgcga gcggcccctg cgcctgctgc agcgggagca gcaccgcggc
     2761 gcccaggctg ccgagaaacg tgcggcggga ctggttggtc actcgatccc cgctcccact
     2821 cctgccagcc tcggctgggc aacagcgcgc ctcggcgtgg tgaccgtggc tccgccaccc
     2881 ggccacatcg tcaccagacc cccgaaggcg agcacgaacc caccgaacca gacccaccat
     2941 accagcgggt tgatggtgaa ccggtacacc gcctcttccg ttccggccac cgagcccgcg
     3001 taggtgatgt agacgtcttc ctgcaggtcg cttcggatcc ccacctcggt ggacggctcg
     3061 aacgtcgggc gccggaagct gtccacgtgc tgccgcttct ccgagctcat caacccggtg
     3121 ggcctgccgt ccttcgccac ctgtaccgtc gccgcgctca cgatccggtt cagggcctcg
     3181 aactgggaga cgccgacgtg ggtgaaggtg taggtgtggc cgaacggact ggccagcgtg
     3241 gcggactggc ctggcttgag ggtcgcctcg atctcgcgct tgaaggccat cccggagaac
     3301 ccgacgaaat agatcacgat gccggcatgc accaggtagc cgccgtaccg ccgtcgattg
     3361 cgggccacca gccgagcgaa ggcgagtggc gccgattccc cgtgcatccg ccgtcgggcc
     3421 cgcaccccgc ggtagaactc ctgcacgatg gtgccggtga cgaagcccgc cagccccagc
     3481 gccatcaccg gatagagtcc tcgcatcccc gccgccacga gcgcgacggc ggtgacgacc
     3541 ccggtggtga ccggccagat gaactggcgg cgcaggttgc cgggcgaagc cttccgccat
     3601 gcgatcagcg gtccgacccc cgtgagcgcg aggagcagca atccgatcgg cacgttcacc
     3661 cggttgaaga acggggggcc gaccgtgatc ttgctgcccc gcaccagctc ggagagaatc
     3721 gggaagagcg tcccccacag taccgagaag gcgaccccca ccagcagcag gttgttgaag
     3781 aggaaggccg cctcccggct caccaccgac tccagctgca cgtccgcctt gagcgagggc
     3841 cagcgggtgt agagcagggt gaacgagagg accccgcaga ccacgaggaa cgcgaggaag
     3901 aagtacccca cgttcgactg ggtgaagctg tgcacgctcg cgatcacgcc cgagcgggtg
     3961 atgaaggtgc cgaagatgct gagcaagaag gtcccgacga tgagccccag gttccagcgc
     4021 ttcagcatcc cgcgcttctc ctggatcatc accgaatgga gaaaggcggt catcgtgagc
     4081 cagggaagca ggctcgcgtt ctccactgga tcccaggccc agtatccgcc ccagcccagc
     4141 tcgacatagg cccaccacat gccgagcgtg atcccgatgg agaggaagag ccagctcacc
     4201 agcgtccacc tgcggatcgc gtggatccag cccgtatcca ggctgcgcga catgagcgcg
     4261 gcgatggcga aggcgaatgg aatggtgatg ctgatgtagc c
//
LOCUS       DASUYN010000512         3433 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1708180, whole genome shotgun sequence.
ACCESSION   DASUYN010000512 DASUYN010000000
VERSION     DASUYN010000512.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3433)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3433)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3433
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1708180"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(129..995)
                     /locus_tag="VF061_09965"
     CDS             complement(129..995)
                     /locus_tag="VF061_09965"
                     /inference="COORDINATES: protein motif:HMM:NF025858.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4438 domain-containing protein"
                     /protein_id="HEX6669874.1"
                     /translation="MPRTNSDRLVKMAVAGEVSAPTVPPTRYRVGAGGRPFVPIGMAG
                     VVYNVKVGDRAFGWAGDHVEPGVSIHHPEPWADYAMHYLACVGNSARVTSGDAQGAPG
                     VVTGEHARLLIDFPDDVLDRLCVGDQIQIEAIGAGLALPDYPHITARKLDPDLLDRLN
                     LREAPGGVLQAGVTLMLPSYAMASAWELGPEYVDHDITTNDREMVRELGIDRLRIGDL
                     VAVTDTDHSWGRGYRKGAVMIGLINHADSPQIGHGPGCMTLLSCADGRLQPFLDPDAN
                     VANFLGCGRARD"
     gene            complement(1037..1489)
                     /locus_tag="VF061_09970"
     CDS             complement(1037..1489)
                     /locus_tag="VF061_09970"
                     /inference="COORDINATES: protein motif:HMM:NF024859.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX6669875.1"
                     /translation="MEISGIKHIAVAVHDLEQALALYQRLLGVGQVTIKESQAKTREA
                     WVVVGGVEFQLIQPLPGEGRYSEFMATHNGEGVHHVCYTVDNIDEALAEVRARGAKLT
                     PCRSCQVAGSHKHSEGWVAFLEDRAAGLEIEFMQVYKPGEGKDAPNPA"
     gene            complement(1506..2489)
                     /locus_tag="VF061_09975"
     CDS             complement(1506..2489)
                     /locus_tag="VF061_09975"
                     /inference="COORDINATES: protein motif:HMM:NF016817.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M14 family metallopeptidase"
                     /protein_id="HEX6669876.1"
                     /translation="MQPLQVGSAAAAAGSRADGAIPVTKRPGGQDLAIPVVVVNGSRD
                     GPVLWIDGAIHGDEVEGPLAIHKLLAELDPGALRGAVVAVPVLNVEAFEAQQRGNPFD
                     GFTYDMNRIYPGKAEGYPSERVAWAHYRQMIDLADVLVSVHSGGAHSYLAQAQFYNDT
                     PAGLELAKAMGPGWDLILKPLGSSGNPGAAMAEKGKGAITVELGGMCATLPDELHRNS
                     DVFKESFLNILRHYQMIEGEPKYAGTWQLGIQRTVLAGVGGYFVPERGIKYREPVKAD
                     TLMARICDLYGNVLEEVRAPCDGQIFGMRTQPCVFQGDWACFYGEVLETIQ"
     gene            2638..3291
                     /locus_tag="VF061_09980"
     CDS             2638..3291
                     /locus_tag="VF061_09980"
                     /inference="COORDINATES: protein motif:HMM:NF025126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEX6669877.1"
                     /translation="MLPTDRFKPYAPTVQAAGRLEEAPPTVSADAGSLRGDNMAADGA
                     GLDLLIAVGRDAPAAAGSQAGVWSADCFGYDAARDGWICSADKLLLRQGTPLGGRGRP
                     SQHRYLADPADCAACPLRARCLKPGEVRRVLVAQRCPATGAMRFTLRPPAARRRYARR
                     QAIVEPVFGQRKEDRGFTMRNLRGLTLAAGEYLLACLAHNLGTLLRGCPLPPTRALA"
BASE COUNT          501 a         1262 c         1136 g          534 t
ORIGIN      
        1 ggcccgcacg gtcgatggtg tgcggcatcg ccggcaaggg cggcattcgg ggcgccacta
       61 cctcgccgct cacagagacc tcgaccaggg cgctctcgtt cgtcatcagc atccggtcca
      121 ctcccgcttc agtcgcgcgc gcggccacaa ccgaggaaat tggcgacatt ggcgtctggg
      181 tcgaggaacg gctgcaggcg cccgtccgcg cacgagagga gcgtcatgca gcccggcccg
      241 tgcccaatct ggggggagtc ggcgtggttg atcagcccga tcatcacggc gccctttcga
      301 tagccccggc cccaggaatg gtccgtgtcg gtgaccgcca ccagatcgcc gatacgcagc
      361 cggtcgatgc ccagctcacg gaccatctcc cggtcgttcg tggtgatgtc gtggtcgacg
      421 tattccggcc caagctccca ggctgaggcc atcgcgtagg aaggcagcat gagcgtcact
      481 cccgcctgga gcacgccgcc gggcgcctcc cgcaggttca ggcgatccag cagatcgggg
      541 tcaagcttgc gggccgtgat gtggggataa tccggcagcg ccagacccgc tccgatcgcc
      601 tcgatctgga tctgatcgcc aacgcagagg cggtccagga cgtcgtccgg gaagtcgatc
      661 aggaggcggg cgtgctcgcc ggtcaccaca cccggggcac cctgggcatc ccccgaggtc
      721 acccgggccg agttgccgac acaggccagg tagtgcatgg cgtagtcggc ccagggctcc
      781 gggtggtgga tcgagacgcc cggctcgacg tggtcacccg cccaaccgaa ggcccggtcg
      841 cccaccttga cgttgtagac gaccccggcc atcccgatcg gcacgaacgg cctgccgccg
      901 gcgccgacgc ggtagcgcgt cggcgggaca gtcggcgccg agacctcacc ggccaccgcc
      961 atcttcacca gccggtcgga gttcgtccgc ggcacggccc tccccctcgc atgtcgccgc
     1021 ccgggcggcg ggcacgtcac gccggattcg gcgcgtcctt tccctcaccc ggcttgtaga
     1081 cctgcatgaa ctcgatctcc aggccggccg cgcggtcctc caggaaggcc acccacccct
     1141 ccgagtgctt gtgagagccg gcgacctggc agctccggca cggcgtcagc ttcgcgcccc
     1201 gcgcccggac ctcggccagc gcctcgtcga tgttgtcgac ggtgtagcag acgtggtgga
     1261 caccctcgcc gttgtgagtg gccatgaact cgctgtagcg gccctcgccc gggagcggct
     1321 ggattaattg aaactccaca ccgccgacca ccacccaggc ctcacgggtc ttcgcctgcg
     1381 actccttgat ggtaacctgg ccgaccccga gcaggcgctg gtacagggcg agcgcctgct
     1441 cgagatcgtg caccgcgacg gcgatgtgct tgatcccgct gatctccacg actccctcca
     1501 acctcctact gaatcgtctc caggacctcg ccgtagaagc aggcccaatc gccttggaag
     1561 acgcacggct gagtccgcat cccgaagatc tggccgtcac agggcgctct cacttcttcg
     1621 agcacgttgc cgtagaggtc gcagatccgg gccatcagcg tatcggcttt caccggctcg
     1681 cgatacttga tgcccctctc cggcacgaag tagccgccga ctcccgccag cacggtccgc
     1741 tgaatgccaa gctgccaggt cccagcgtac ttcggctcac cctcgatcat ttggtagtgg
     1801 cgcaggatgt tgaggaacga ctccttaaac acatcactgt tccggtggag ctcatccggc
     1861 agtgtcgcgc acatgccacc cagctcaacc gtgatggcgc ccttgccctt ctcggccatg
     1921 gcggcacccg gatttccgct gctcccgagg ggcttgagga tcaggtccca gcccgggccc
     1981 atcgctttgg ccagctccag gccggcgggg gtatcgttgt agaactgggc ctgggccagg
     2041 taggaatggg cgccccccga gtgaaccgac acgagcacgt ccgccaggtc gatcatctgt
     2101 cggtagtggg cccacgccac ccgctcgctc gggtaaccct cggccttgcc agggtagata
     2161 cggttcatgt cgtaggtgaa gccgtcgaac gggttgcccc gctgctgggc ctcgaaggcc
     2221 tcgacattca gcactggcac ggctaccacc gcgccgcgca gcgcgcccgg gtccagctcg
     2281 gccagcaact tgtggatcgc cagcggcccc tccacctcgt cgccgtggat ggccccgtcg
     2341 atccagagca ctgggccgtc acggctgccg ttgacgacca cgaccgggat cgccaggtcc
     2401 tgacctcccg ggcgcttggt gaccgggatc gcaccgtcgg ctcgggaacc ggccgcggcc
     2461 gcggccgaac ccacctggag gggctgcatc gccggatacc tcccgtctgt gacatgctcg
     2521 tcccgaccgg cccgccggtg tgctcaagaa tacaggaccc gtggtctccg cgctagtagg
     2581 ctgggtcagg ggttggggct ggcagaggag tggtaggggc aggtaggctc tggggccatg
     2641 ctacctaccg accgcttcaa gccgtacgcg ccgaccgtgc aggcggcggg gcgcctggag
     2701 gaggcgccgc ccaccgtgag cgccgatgcc ggctccttgc gcggggacaa catggcggcg
     2761 gacggggccg ggctcgacct gttgatcgcc gtcgggcgcg acgctccggc cgctgcgggg
     2821 agccaggcgg gcgtctggtc ggccgactgc ttcggttacg acgccgcgcg ggatggctgg
     2881 atctgctcgg ccgacaagct cctgctgcgc caggggacgc cgctcggcgg gcggggccgc
     2941 cccagccagc accgttacct ggcggatccg gccgactgcg cggcctgccc gctgcgcgcc
     3001 cgatgcctca agccgggcga agtgcggcgg gtgctggttg cccagcggtg cccagccacg
     3061 ggcgcgatgc gcttcacgct ccgcccgccc gccgcgcggc ggcggtacgc ccgccgccag
     3121 gcgatcgtcg agccggtctt cggtcaacgc aaggaggacc gaggcttcac catgcgcaac
     3181 ctgcgcggcc tcaccctcgc cgccggcgag tacctgctgg cgtgcctggc ccacaacctc
     3241 ggcacgctgc tgcgcgggtg ccctctgccg ccgacccgcg ccttggcctg agcgacccgg
     3301 ccgccggccc gccccgccgg tgcctcccca tcaccgccgg ctcgggtccc cgtcaggccg
     3361 gcgactcgtc accccccgtc gcggcggacc cgtgacccag cctcatagta tcgtaccggc
     3421 tcggcaggtc agt
//
LOCUS       DASUYN010000513         2688 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_605583, whole genome shotgun sequence.
ACCESSION   DASUYN010000513 DASUYN010000000
VERSION     DASUYN010000513.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2688)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2688)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2688
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_605583"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1528
                     /locus_tag="VF061_09985"
     CDS             <1..1528
                     /locus_tag="VF061_09985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669878.1"
                     /translation="SPAEARLVLRQRLEQREADFLALAERLVYGQAASPYRELLRLAG
                     CEYGDLERLVRQEGLEGALRVLLDNGVYLTVEEFKGRRPTVRGSATIAVGPQRLLNPL
                     TATRAWSQSGGSRGPATRSPLDFAHVRDRAINECLVLDARGGVDWAHATWLTPGSWAL
                     KHLLHYGAFGVAPARWFSQVDPATPALHPRYRWSARVLRWGSLLAGVPLPAPEYTPLT
                     DPRPIVRWMTDVLRSGRTPHLHTFASSAVQLCQAALSAGADLRGARLTVGSEPITAAR
                     MAVLRQAGAEPLPSYGTEEAGAIGRGCLAPEAVDDVHLLHDLHAVIQPGAAGVARGLP
                     PRTLLFSSLRRTAPYVLLNVSMGDQAELARRPCGCPLERLGWATHLHTIRSFEKLTAG
                     GMTFLDADVIRVLEETLPARFGGGPTDYQLIEGELVGGQPGLRLLVHPALGPLDHAAV
                     ARAFLAALGSGAETARVMGLVWRDGEFLRVQREAPRATASGKVLHLHLEQRSPPSLAS
                     "
     gene            1757..2632
                     /locus_tag="VF061_09990"
     CDS             1757..2632
                     /locus_tag="VF061_09990"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX6669879.1"
                     /translation="MAGHGSGALPIYLAAEHTFRDEGLEVEIVGFNGGAPAAQALASD
                     SIDIGLLALSTLINLIDTGQPVKAFYAGFNQADFAWFGGPGVSNWGDLSGKTIAVASH
                     GDLTDILTRYVLRKHGLEPERDVQVFATGGSTHSLQALKAGALGAAMLAPPMRFQAEA
                     DGHTQLGTQKGELIATWPKNVLIAKERMLDTRTDTLRAVARAVARAIRLAKADREAAV
                     QAIIKALNYERAYAERAYDDAIGDFDERGLLPAEALPLFWQLGPATGQPSDPWPESRF
                     LDRRVIDSLDGAAPR"
BASE COUNT          359 a          984 c          961 g          384 t
ORIGIN      
        1 cagcccggcc gaggccaggc tcgtcctgcg ccagcggctg gagcaacgcg aggccgattt
       61 cctggccctc gccgaacggc tggtctacgg gcaggcggcg agtccgtacc gcgagctgtt
      121 gaggctggcc ggctgcgagt acggggatct cgagcggctg gtgaggcagg agggcctgga
      181 aggggcgctc cgagtcctcc tggacaacgg ggtgtacctg acggtcgagg agttcaaggg
      241 gcgccgcccg accgtcaggg gcagcgccac gatcgcggtg gggccccagc gactcttgaa
      301 cccgcttacg gcgacccggg cctggagcca gagtggcggg agtcgcggcc cggcaacccg
      361 ttcgccgctc gatttcgctc acgtccggga tcgcgcgatc aacgagtgtc ttgtcctcga
      421 cgcccgcggc ggcgtggact gggcccatgc aacctggctc acccccggca gttgggccct
      481 caagcacctc ctccactatg gcgccttcgg ggtggccccg gcccgctggt tctcccaggt
      541 cgatccggcg acgcccgccc tgcatccccg ctaccgctgg agcgcgcgcg tgctccgctg
      601 gggcagcctc ctggccggcg tgccgttgcc cgctccggag tacactccgc tcaccgaccc
      661 gcggccgatc gtccggtgga tgaccgacgt gctccgctcg gggcgcacgc cccacctcca
      721 cacctttgcg agctcggcgg tgcagctctg ccaggcggcg ctcagcgcgg gcgccgatct
      781 ccgcggcgcc cgcctcaccg tcggatcgga gcccatcacg gcggcgcgca tggccgtcct
      841 gcggcaggcc ggcgccgaac cactgccgag ctatgggacg gaggaggccg gcgccatcgg
      901 ccgcggctgc ctggcgcccg aggctgttga tgacgtccac ctcctgcatg acctgcatgc
      961 ggtgatccag cccggggcgg ccggcgtcgc tcgcgggctg ccgccgcgta cgctgctgtt
     1021 ctcctcgctg cgccggacgg cgccctacgt cctcctcaac gtctcgatgg gcgaccaggc
     1081 tgagctggct cggagaccct gcggctgtcc gctcgagcgg ctgggctggg cgacccacct
     1141 gcacaccatc cgcagcttcg agaagctcac cgccggcggg atgaccttcc tcgatgccga
     1201 cgtgatccgg gtcctggagg agaccctgcc ggcccgcttc ggcggggggc ccaccgacta
     1261 ccagctcatc gaaggggagc ttgtcggtgg gcagcccggc ctgcggctgc ttgtccatcc
     1321 cgccctgggc ccgctcgacc acgcggcggt ggcacgcgct ttcctggcgg cgctcggcag
     1381 cggcgccgag acagcgcggg tgatggggct ggtctggcgg gatggtgagt ttctccgagt
     1441 ccagcgtgag gcgccgcggg ccacggccag cggtaaggtc ctgcacctgc acctcgaaca
     1501 gcgctcgccg ccaagcttgg cctcctagct catgccgtcc gccgcgcgcc ccaggaaccc
     1561 ggatcggagg gcaccgtctc acggtcggcg cggaggggcc gctgccgccc tggcggcgat
     1621 cgccgtgctg gcctcggcct gcggcctcgc cggacgaccg agcccggcat cggcccctcc
     1681 aaccgcgggg ccggccccaa ccacggctcc ggcggagcca gccgcgcggc cggcgaagac
     1741 ccgtctgaag ctcggggtgg ccgggcatgg cagcggcgca ctgccgatct acctggcggc
     1801 cgagcacacc tttcgggatg aggggttgga ggtcgagata gtcggcttca acgggggggc
     1861 gccggcggcg caggcgctcg cgtccgactc gatcgacatc ggcctgctcg cgctgagcac
     1921 cctgatcaac ctgatcgaca ccggccagcc ggtcaaggcg ttctacgccg gcttcaatca
     1981 ggccgacttc gcgtggttcg gcggcccggg ggtgagcaac tggggcgacc tgagcggcaa
     2041 gaccatcgcc gttgccagtc acggcgatct caccgacatc ctgactcgct acgtgctgcg
     2101 gaagcacggc ctcgaaccgg agcgggacgt ccaggttttt gcgacggggg gctccacaca
     2161 ttcgctgcag gcgctcaagg ccggcgcact gggcgccgcc atgctggcgc cgccgatgag
     2221 gttccaggcg gaagcggatg gccacaccca gctcgggacg cagaagggcg agctgatcgc
     2281 gacatggccg aagaacgtcc tcatcgcgaa ggagcggatg ctcgacactc ggaccgacac
     2341 gcttcgcgcc gtcgcgcgcg ccgtggccag ggccatccgg ctggcgaagg ccgatcggga
     2401 ggccgccgtg caggcgatca tcaaggcgct caactacgag cgggcgtatg ccgagcgggc
     2461 ctacgacgac gctatcggcg acttcgacga gcgcgggctc ctgcccgccg aggccctgcc
     2521 gctcttctgg cagctcggtc ccgcgacggg tcagcccagc gacccgtggc cggaatcgcg
     2581 gttcctggac cgccgtgtca tcgacagcct cgacggggcc gccccccggt agtcggcgcc
     2641 ggctctgcca gtcgtcgtcg gccaccggcg ggtggacgtg taccaacc
//
LOCUS       DASUYN010000514         2232 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1708498, whole genome shotgun sequence.
ACCESSION   DASUYN010000514 DASUYN010000000
VERSION     DASUYN010000514.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2232)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2232)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2232
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1708498"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..180
                     /locus_tag="VF061_09995"
     CDS             <1..180
                     /locus_tag="VF061_09995"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX6669880.1"
                     /translation="GIPPDLQSRIFDPYWTGKEGGTGLGLALAKQTIELHQGTVVVER
                     TPGGGASFVVRLRGL"
     gene            177..1547
                     /locus_tag="VF061_10000"
     CDS             177..1547
                     /locus_tag="VF061_10000"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEX6669881.1"
                     /translation="MTAISGQILLVDDEANIRRMLGALLREEGFSVTEAGNGNAALLM
                     VDQADPDVILLDLLMPPGPDGLETLARLRERGRLTPVIMMSGKAQLTDAVRAVKLGAF
                     QFLEKPLTPEAVLVTVRAALELDRTRAQNRALQAELAKRGHLVGDSPALQQVRALIAR
                     VGPTEARVLITGESGTGKELVAAAVHAASRRANRAFVTVNCAAIPRDLVESEMFGHER
                     GAFTGATERRLGRFELAHEGTLFLDEIGDLSAEAQAKLLRTLETGELQRIGAETSIHA
                     DVRVISATNRRLEDEVAAGTFREDLFFRLNVFPIMLPPLRDRPEDLPALVAHLAERVR
                     PRQAVTFTPAALEAMRGYSWPGNVRELANLVERLSILCGPTVDAAAVRGVLRGGPPVP
                     LPSGLTGLPLSEALDEFERSLISAAMTQAEGNVAEAARVLQTDRANLYRRMRRLGIEK
                     VGEGDA"
     gene            1544..>2232
                     /locus_tag="VF061_10005"
     CDS             1544..>2232
                     /locus_tag="VF061_10005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HEX6669882.1"
                     /translation="MRRPFGELWAGVAGLVILLTLPAAALAQDSVIVFDPDAPPADTV
                     ELVGPPPEVLTELIEFYNDSATTRIEGDVTFPADSRFEGRLALHRGTLRVAGRVDGPI
                     AVANGTLHLLPGADVRGDILVIGGRLIRAALTHHSGRERVYWDAAPVMRTEDGLLTVR
                     ERRRRIGDLAAARTSFQTGKVRTTLLLTTGGTYNRIEGLPIVFGPTFDLRTGQRSSLK
                     LDLRGILRTAGG"
BASE COUNT          311 a          794 c          812 g          315 t
ORIGIN      
        1 ggcattccgc ccgacctcca gagccgcatc ttcgatccct attggaccgg caaggagggc
       61 ggcaccggcc tcggcctcgc cctggcgaag cagacgatcg agctccacca gggcaccgtc
      121 gtggtcgagc ggaccccggg aggcggcgct tccttcgtgg tgaggctccg aggcctgtga
      181 ccgcgatctc cgggcagatc ctcctggtgg acgacgaggc caacatccgc cggatgctgg
      241 gcgcgctcct ccgggaggaa ggcttcagcg tcaccgaagc tgggaacggc aacgccgccc
      301 tcctgatggt ggaccaggcc gatcccgacg tcatcctcct cgacctgctc atgccgcccg
      361 ggccggacgg gcttgagacg ctcgcccgcc tgcgcgagcg gggccggctc acgccggtga
      421 tcatgatgag cgggaaggcg cagctcaccg acgcggtgcg ggccgtgaag ctgggcgcgt
      481 tccagttcct ggagaagccg ctcacccccg aggccgtgct ggtcacggtg cgcgccgccc
      541 tggagctgga ccgcacccgg gcgcagaatc gggcgctcca ggccgagctg gccaagcggg
      601 ggcacctggt gggcgacagc ccggcgctgc agcaggtgcg ggccctcatc gcccgggtgg
      661 gaccgaccga ggcgcgggtg ctcatcaccg gcgagtccgg caccggcaag gagctggtgg
      721 cggcggcggt gcacgcggcg agccgccgcg ccaaccgggc cttcgtcacc gtgaactgcg
      781 cggcgattcc tcgcgacctg gtcgagtcgg agatgttcgg ccacgagcgc ggtgccttca
      841 ccggcgccac cgagcggcgg ctgggccgct tcgagctggc tcacgaaggg acgctgtttc
      901 tggacgagat cggcgacctg agcgcggagg cgcaggccaa gctgctgcga acgctggaga
      961 cgggcgagct gcagcggatc ggcgccgaga cctccatcca tgccgacgtg cgggtgatat
     1021 cggcgaccaa tcgccgcctg gaggacgaag tcgcggccgg aaccttccgg gaagatctct
     1081 tcttccgact caacgtcttt ccgatcatgc tgcccccgct gcgggaccgg ccggaggacc
     1141 tccccgccct cgtcgcccat ctcgccgagc gggtgcggcc gaggcaggcg gtgaccttca
     1201 ccccggccgc tctggaggcc atgcgggggt attcgtggcc cggcaacgtc cgggagctgg
     1261 cgaatctggt cgagcggctc agcatccttt gcggaccgac cgtggatgcc gccgccgtgc
     1321 gcggggtgct ccgcggcggt ccgcccgtgc cgctcccctc ggggctgacc ggcctccctc
     1381 tgtccgaggc gctcgacgag ttcgagcgca gcctcatcag cgccgccatg acccaggccg
     1441 aggggaacgt ggccgaagcc gcgcgggtgc tgcagaccga tcgcgccaat ctgtatcgcc
     1501 ggatgcgccg gctgggcatc gagaaggtcg gcgaggggga cgcgtgaggc gcccgttcgg
     1561 cgagctctgg gcaggcgttg ccggcctggt cattctcctc acgctgcccg cggccgcgct
     1621 ggcccaggac agcgtcatcg tgttcgaccc ggacgcaccc cccgccgaca cggtggagct
     1681 ggtgggcccg ccaccggagg ttctgaccga gctgatcgag ttctacaacg actcggcgac
     1741 cacccgcatc gagggtgacg tcaccttccc ggccgacagc cggttcgagg gaaggctggc
     1801 gctgcaccgg ggcacgctcc gggtcgccgg ccgggtggac ggtcccatcg ccgtggcgaa
     1861 cgggaccctg cacctcctgc cgggggccga tgtgcggggc gacatcctgg tgatcggcgg
     1921 ccggctcatc cgtgccgccc tcactcatca ctcgggacgc gagcgggtgt actgggacgc
     1981 cgccccggtg atgcggacgg aggacgggct gctgacggtc cgggagcggc gccggcggat
     2041 cggcgatctc gccgcggcgc gcaccagctt tcagacgggc aaggtcagga ccacgctctt
     2101 gctgacgacc ggggggacct acaaccggat cgagggactc cccatcgtct tcgggcccac
     2161 cttcgatctg cggaccggcc agcgctcgtc gctcaagctc gacctccgcg gcatcctgcg
     2221 cacggccggc gg
//
LOCUS       DASUYN010000515         6928 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_387355, whole genome shotgun sequence.
ACCESSION   DASUYN010000515 DASUYN010000000
VERSION     DASUYN010000515.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6928)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6928)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6928
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_387355"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..512
                     /locus_tag="VF061_10010"
     CDS             <1..512
                     /locus_tag="VF061_10010"
                     /inference="COORDINATES: protein motif:HMM:TIGR00633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEX6669883.1"
                     /translation="VYAHPPFDLESRVVTADLGDLVVASIYVPNGGKDYPAKLTFLTR
                     LIEWARELRSGGRELLLCGDLNVARTEMDVHPRERKPMAVGQRPEERALFEQLLGTGL
                     TDVGRAMDPHNAGLFTWWAPWRNLRARNIGWRLDYLLASPGVFARVRSCLVQADVGTS
                     DHAPVLMAP"
     gene            complement(581..1084)
                     /locus_tag="VF061_10015"
     CDS             complement(581..1084)
                     /locus_tag="VF061_10015"
                     /inference="COORDINATES: protein motif:HMM:NF017758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HEX6669884.1"
                     /translation="MGLLSKPIKNLDDLFVHTLQDVLYAEQRITKALPKMISKVSDPQ
                     LQDAFRSHLEETKGQIKRLEQVFQMHNAEAKAVTCPAIDGIIEEAEAIMSDSKDSEVL
                     DAAALAAAQAVEHYEIARYGTLIAWARQLGRPDCASVLEPTLNEEKAADKKLTGIAEA
                     RVNRVAV"
     gene            complement(1197..2273)
                     /locus_tag="VF061_10020"
     CDS             complement(1197..2273)
                     /locus_tag="VF061_10020"
                     /inference="COORDINATES: protein motif:HMM:NF017984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix DNA-binding domain-containing
                     protein"
                     /protein_id="HEX6669885.1"
                     /translation="MHIAWSRLQAQRLTAGHLTRPEEVVAWLGAVQAQEYPLAKWGLA
                     LRLRRASDTSLERAFASGAILRTHVLRQTWHFVSPPDLRWMLALTAPRVRAAVAHYDR
                     RLGIDAAVITRANRAIAKALAGGAQLTRAELKAVLLGAGVAVEGTQRLAHVIMHAELD
                     AVICSGPRRGKQFTYALLDDRVPPGPRLARDDALAALARRYFTGHGPAQLQDFTWWSG
                     LTVGEARAGLELSRQHLAEATVDGKRYWLGPSAAAVERPPRAAYLLPPYDEYLIAYKD
                     RSAALAPGLWDRIARRDPFMAPVVLDGRVIGGWKRSVTRGEVAIRLRLPGRVSPADRR
                     LVYEAAHRHGAFLGLEVVLGRQMP"
     gene            complement(2281..2751)
                     /locus_tag="VF061_10025"
     CDS             complement(2281..2751)
                     /locus_tag="VF061_10025"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX6669886.1"
                     /translation="MHIIEGGLDDPRVVALLDLHVSRARAETARGSAHALDLPGLRAP
                     GMTFWSAWEGDEVVGVGALKQLSADHGEVKSMHTAEVARGRGVGSALLRLIMETARER
                     GMTRLSLETGAWPYFLPARALYARHGFVECGPFGDYRPDPNSVFMTLELGPVGG"
     gene            2850..3482
                     /locus_tag="VF061_10030"
     CDS             2850..3482
                     /locus_tag="VF061_10030"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX6669887.1"
                     /translation="MRLRRQMVLFVAGLAACAGIPGSACGQDDFASDAARLVTALKLQ
                     PGQTVADIGAGRGELTVELAREVGPGGEIYATELDADRLRDIREAAAAAGLKNVTVVE
                     AHATRTNLPAACCDALVLRRVYHHIRDPSLMNASMRESLRPGGLLAVIDFLPDSTEST
                     DPGGRASGDQHGVTSETVTRELSEAGFEVVAVEQGGRNDRYMVVVRRPAS"
     gene            complement(3509..4186)
                     /locus_tag="VF061_10035"
     CDS             complement(3509..4186)
                     /locus_tag="VF061_10035"
                     /inference="COORDINATES: protein motif:HMM:NF017959.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF998 domain-containing protein"
                     /protein_id="HEX6669888.1"
                     /translation="MLRKALLACGVLSSLLYVGADLLAAVRFPGYHDFFSQAISELTA
                     IGAPTRGLVAPLLIAYDVLIIAFGVGVWMSPGGRRRTRQLVGGLLAGIGVVGLAAFPL
                     APMHLRGTGSLAADAPHIAVTGVIVLCIFLAVGLGASLFGRGFRLYSYGTLAALLVFL
                     VWTGVEAARLAALEPTPWFGAVERLHIGAYLLWVAVLAAALLRPAAATARAPGGVELS
                     GALGVVR"
     gene            complement(4197..5687)
                     /locus_tag="VF061_10040"
     CDS             complement(4197..5687)
                     /locus_tag="VF061_10040"
                     /inference="COORDINATES: protein motif:HMM:NF012363.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylesterase/lipase family protein"
                     /protein_id="HEX6669889.1"
                     /translation="MSAGSETVAWTAQGALRGSLTEGVHAFKGVPYAAPPFGPRRLRS
                     PQPVAPWTGVRDALDWGPMPPQLPYPKPWDELIPERGALGEDCLNLNIWTPDPGGARL
                     PVMVWIPGGMFEAGSGATYDGSRFARDGVVCVTINYRVGAEGFLYLDDGTPNLGLLDQ
                     LAALAWVQENITAFGGDPANVTVFGQSAGAMSVGTLLSMPRAAGLFRRAIAQSGGAHQ
                     VIPLEAARRVGRDIAARLGVTPTRAGIAAVPVARLLQAQAALKADLMARPDPGRWGGE
                     VVESALPWQPVVDGDVVPGRPIDRIVAGAGAGIDLMAGAAAEESRFFLVPGGAIDQIT
                     PDMLAGVVRGYGLPVEAALAAYRAGYPGAGPGELFAAVQGDRLFRIPAIRLADAHAPR
                     ASRTYMYEFAWRSPLFGGRLGACHGIEIAFVFDTLGEMERLGGLDAPQSLADTVHAAW
                     IGFARRGDPGWPRYGLTRRTTMRFDTTPELVDDPRAMERTLWEGVL"
     gene            complement(5707..6276)
                     /locus_tag="VF061_10045"
     CDS             complement(5707..6276)
                     /locus_tag="VF061_10045"
                     /inference="COORDINATES: protein motif:HMM:NF024135.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin domain-containing protein"
                     /protein_id="HEX6669890.1"
                     /translation="MTRVLIAYATSEGHTAKIAEYIAGVIREHGHQAYPVNVGRTTPD
                     PRAYDAVIVGGSIHKGRHQTAVGEYVRETREHLERLPTAFFSVSLVVASGTEQGRKDA
                     WACAEEFFRLTQWRPSRVELVAGALLYTQYNFLVRWIMKRIARSYGSQDLDTSRDYVY
                     TDWSALRRFAEEFLETAVPARLAAHGVGG"
     gene            6457..>6928
                     /locus_tag="VF061_10050"
     CDS             6457..>6928
                     /locus_tag="VF061_10050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669891.1"
                     /translation="MLHRPPVLLLALGLAACSARDGLLTPGEAEPSRALGIWRPGPYD
                     SCSREQHDAYAVLGPDGRAYPTWHPPTGPGGCSFGHEHGRDPAGSDLYDPEVGVPFGV
                     ANEMLALADPAHPRDEDHVGHKVEWENDLELALSGAGAPASTTVCDVLLKLHQGT"
BASE COUNT         1037 a         2561 c         2376 g          954 t
ORIGIN      
        1 cggtgtacgc ccacccgccc ttcgacctcg agtcccgcgt ggtgaccgcc gacctcggcg
       61 acctggtggt ggcctcgatc tacgtcccca acggcggcaa ggactacccg gccaagctca
      121 cgttcctgac gcggctgatc gagtgggcgc gcgagctcag gtccggcggc cgcgagctgc
      181 tcctctgcgg tgatctcaac gtcgcgcgaa ccgagatgga tgtgcatccg agggagcgga
      241 agcccatggc cgtcggccag cggccggagg agcgcgccct gttcgagcag ctcctgggga
      301 cgggtctcac cgatgtgggc cgggccatgg atccacataa cgccggcctc ttcacgtggt
      361 gggcgccctg gcggaacctc cgcgcgcgca acatcggctg gcggctggac tatctgctcg
      421 cgtcgcccgg cgtgttcgcc cgggtgcgaa gctgcctggt tcaggccgac gtgggcacca
      481 gcgaccacgc gccggtcctc atggccccct gagtcggagc gtgaaagagg gtgacccggg
      541 cgtcccgccc gatcaccctc cgtcctgccg ctacccgtcc tcagaccgcg acgcgattga
      601 cccgggcttc ggcgatcccg gtcaacttct tgtccgccgc cttctcttcg ttgagcgtcg
      661 gctcgagcac gctggcgcag tccggacgcc ccagctggcg cgcccacgcg atcagcgttc
      721 cgtaccgcgc gatctcgtag tgctccaccg cttgcgcggc cgccagcgcc gcggcgtcca
      781 gcacctcgga gtccttcgag tcgctcatga tcgcctcggc ttcctcgatg atgccgtcga
      841 tcgccgggca ggtgacggcc ttcgcttccg cgttgtgcat ctggaacacc tgctccagcc
      901 gcttgatctg ccccttggtc tcctccaggt ggctccggaa ggcgtcctgc agctgggggt
      961 cggagacctt cgagatcatc ttcggaaggg ccttcgtgat ccgctgctcg gcgtagagga
     1021 catcctggag ggtgtgaacg aacaggtcat cgagattctt gatcggcttg gaaagcaaac
     1081 ccatgatttc aacctctgct atgagtgggc cacaccgggg attccaccag tgcggcgatg
     1141 tgtccattcg ggactcgcaa catggggaaa tagccgccca ccggccgtga tcgcagtcac
     1201 ggcatctgcc tccccaggac gacctcgagc cccaggaagg cgccgtgccg gtgtgcggcc
     1261 tcgtacacca gccgccggtc ggctgggctc acgcgccccg gcagccgcag ccggatggcg
     1321 acctcgcccc tcgtcaccga ccgcttccac cccccgatca cccgaccgtc cagcacgacc
     1381 ggcgccatga acgggtcccg tctcgcgatc cgatcccaca ggcccggcgc cagggccgcg
     1441 ctgcggtcct tataggcgat caggtattcg tcgtacggcg gcaggaggta cgcggcgcgg
     1501 ggcggccgct cgactgcggc ggcggagggc ccgagccagt agcgcttgcc gtccacggtg
     1561 gcctcggcca ggtgctgccg cgatagctcc agccccgcgc gagcctcccc caccgtcagc
     1621 cccgaccacc aggtgaagtc ctggagctgc gccgggccgt ggcccgtgaa gtaccgccgc
     1681 gccagcgccg ccaacgcgtc gtcgcgagcc aggcgtgggc ccggcgggac gcgatcgtcg
     1741 agcaaggcgt aggtgaactg cttcccccgc cgcggtccgc tgcagatcac cgcgtccagc
     1801 tcggcgtgca tgatcacgtg cgcgaggcgc tgggtgccct ccaccgcgac gcccgccccc
     1861 agcagcaccg ccttcagctc cgcccgggtc agctgcgccc cgcctgcgag cgccttcgcg
     1921 atcgcccggt tggcgcgggt gatgaccgcc gcgtcgatgc cgagcctgcg gtcgtagtgg
     1981 gcgaccgcgg cccggacccg cggcgccgtc agtgcgagca tccagcggag gtcgggcgga
     2041 gacacgaaat gccatgtctg ccgcaggaca tgggtgcgga gaatcgcgcc gctggcgaac
     2101 gcccgctcga gcgacgtgtc gctcgcccgg cgcaggcgca gcgccagccc ccacttggcg
     2161 agcgggtact cctgcgcctg gacggcgccg agccaggcga ccacctcctc gggccgggtc
     2221 aggtggccgg ccgtgagccg ctgggcctgg agacgggacc acgcgatatg catgggacgc
     2281 tcagccgccc accggcccga gctccagcgt catgaacacg ctgttcggat ccggccggta
     2341 gtcgccgaag ggcccgcatt ccacgaaccc gtgccgggcg tacagcgccc gcgccggcag
     2401 gaagtagggc cacgcgcccg tctcgaggct gagccgggtc atcccccgct cccgtgcggt
     2461 ctccatgatc aggcgcagca gggccgagcc caccccacgc ccccgagcga cttcggcggt
     2521 gtgcatcgac ttcacctcgc cgtggtcggc gctgagctgc ttgagcgcgc cgacgccgac
     2581 cacctcgtcg ccctcccacg cggaccagaa cgtcatgcct ggcgcgcgga gtcccgggag
     2641 atcgagcgcg tgcgcgctcc cgcgggcagt ctccgcgcgg gcccggctca cgtggagatc
     2701 cagcagggcg acgactcggg ggtcgtccag cccaccttcg atgatgtgca tggcagcaaa
     2761 ctacgtcggg aaggacaccg cccgcgatgg cacaaagcgc cacccacggt cgtaggtcca
     2821 ggaaggctca atcagacgat gggggaccga tgaggctgcg aaggcagatg gtgctgttcg
     2881 tggcaggcct ggcggcctgc gcgggcatcc ccggctcggc gtgcggtcag gacgatttcg
     2941 cgtccgacgc cgcccgcctc gtgaccgcgc tcaagctcca gccaggccag accgtggccg
     3001 acatcggggc gggccggggt gagctgacgg tcgagctggc gcgcgaggtg ggccccggcg
     3061 gggagatcta tgctaccgag ctggacgccg accggctgcg tgacatccgc gaggcggcgg
     3121 cggccgccgg actgaagaac gtcacggtgg tcgaggccca tgccacccgc acgaatctgc
     3181 cggcggcgtg ctgcgacgcg ctggtactcc gcagggtcta tcaccacatc cgcgatccga
     3241 gcctcatgaa cgcgagcatg cgggaatcgc tgaggcccgg tgggctcctc gccgtcatcg
     3301 atttcctgcc cgacagcacg gagagcaccg atcccggcgg gcgcgcgagc ggcgaccagc
     3361 acggggtgac gtccgagacg gtgacacggg agctgagcga ggcgggattc gaggtggtcg
     3421 cggtcgagca gggggggcgg aacgacaggt acatggtcgt ggtgcggcgg ccggcgagct
     3481 gagccaagcc gccgcctgcg cgccaacctc acctcaccac gccgagcgct cccgatagct
     3541 cgactccgcc cggcgcccgg gccgtcgccg ccgccggccg aagcagcgcg gccgccagca
     3601 cggcgaccca gagcaggtac gcaccgatgt gaagccgctc gaccgcgccg aaccacggcg
     3661 tcggctccag cgccgcgaga cgcgccgcct ccacgcccgt ccacacgagg aacaccagca
     3721 acgccgccag cgtcccgtag gagtacagcc ggaacccgcg tccgaacagc gaagccccca
     3781 ggccgacggc caggaagatg cagagcacga tcacgccggt cacggcgatg tgcggggcgt
     3841 cggccgccag actgcccgtc ccccgcaggt gcatcggcgc gagcgggaac gccgccagac
     3901 ccaccacccc gatccccgcc agcaggccgc cgaccagctg ccgcgtgcgc ctccgccccc
     3961 cgggtgacat ccacacgccc acgccgaagg cgatgatgag cacgtcatac gcgatcagca
     4021 gcggcgccac cagccctcgg gtgggcgcac cgatggccgt cagctcgctg atggcctggg
     4081 agaagaagtc gtggtacccg ggaaatcgca cggcggcgag caggtcggca ccgacgtaga
     4141 gcagcgacga gagcacaccg caggcgagca acgccttgcg cagcatgatg cacctcctag
     4201 agcacaccct cccacagcgt ccgctccatc gcccgggggt cgtccaccag ctccggggtc
     4261 gtgtcgaacc gcatcgtggt ccggcgggtg aggccgtacc tcggccaccc cgggtcgccc
     4321 cggcgggcga acccgatcca ggcggcatgc accgtgtcgg cgagtgattg gggcgcgtcg
     4381 agcccgccga gacgctccat ctcccccagc gtgtcgaaca cgaaagcgat ctcgatcccg
     4441 tggcaggcgc ccagccgccc gccgaacagc ggcgagcgcc aggcgaactc gtacatgtac
     4501 gtgcgcgagg ccctcggcgc gtgcgcgtcc gcgaggcgga tcgcggggat gcggaagagg
     4561 cgatcgccct ggaccgccgc gaacaattcg ccggggcccg cgcccggata ccccgcccga
     4621 taggcggcca gcgccgcctc gaccgggaga ccgtaccctc ggacgactcc cgccagcatg
     4681 tcgggggtga tctggtcgat ggcgcctcca ggcaccagga agaaccgcga ctcctccgcc
     4741 gccgcccccg ccatcaggtc aatgcccgcc cccgcgccgg ccacgatgcg gtcgatcggg
     4801 cggccgggca cgacgtctcc gtccaccacc ggctgccaag gcagcgcgct ctccaccacc
     4861 tcgccccccc agcggcccgg gtcgggccgt gccatgagat cggccttcag cgccgcctga
     4921 gcctggagca ggcgcgcgac cggcacggcc gcgatccccg cccgggtcgg cgtgacgccc
     4981 agtctcgcgg cgatgtcccg gccgacccgg cgcgcggctt cgagcgggat cacctggtgg
     5041 gcgcctccgc tctgggcgat cgcccgccgg aacagccccg cggcgcgggg catggagagc
     5101 agcgtgccga cgctcatcgc gccggccgac tggccgaaga cggtgacgtt ggcgggatcg
     5161 ccgccgaagg ccgtgatgtt ttcctggacc caggccagtg cggcgagctg gtcgagcagg
     5221 ccgaggttgg gcgtgccgtc gtcgaggtac agaaacccct cggcgcccac ccggtagttg
     5281 atggtgacgc agacgacgcc gtcgcgcgcg aaccggctcc cgtcgtaggt cgctcccgag
     5341 ccggcctcga acatgccgcc gggaatccac accatcaccg gcagccgtgc cccgcccgga
     5401 tcgggagtcc agatgttgag gttgaggcaa tcctcgccca gggcgccgcg ctccggtatg
     5461 agctcgtccc agggcttggg ataggggagc tggggcggca tcggacccca gtccaacgcg
     5521 tcgcgcacgc cggtccaggg cgcgaccggt tggggggaac gaagccgccg ggggccgaac
     5581 gggggtgccg cgtaggggac gcccttgaac gcgtggacgc cctccgtcag gctgccgcgg
     5641 agcgcgccct gagcggtcca ggcgaccgtc tccgaacccg cggacaccag cttcgtcggc
     5701 acggtcttac cccccgacgc cgtgcgccgc cagcctcgcc ggaacggcgg tctccaggaa
     5761 ctcttcggcg aaccgcctca gggcgctcca gtcggtgtag acgtagtccc gcgaggtgtc
     5821 caggtcctga ctcccatagg accgggcgat ccgcttcatg atccagcgca cgaggaagtt
     5881 gtactgggtg tacagcagcg cgccggcgac gagctcgacc ctgctcggac gccactgcgt
     5941 cagccggaag aactcttcgg cgcacgccca ggcgtctttc cgtccctgct cggtgccgct
     6001 ggcgacgacc agactgaccg agaagaaggc ggtcgggagg cgctccaggt gctcgcgagt
     6061 ctcccgcacg tactccccga cagcggtctg atgccggccc ttgtggatgg agccgccgac
     6121 gatcaccgcg tcgtacgccc tcgggtcggg ggtggtccgg ccgacgttca ccgggtaggc
     6181 ctggtgaccg tgctcccgga tcacgccggc gatgtactcc gcgatcttcg ccgtgtgccc
     6241 ctccgacgtt gcgtacgcga tcaacaccct ggtcattgtg cctgcctccg atcgttgttc
     6301 gctctaactt ggcgcggggc tcgtgaagaa acggtgaagg gtcttggaaa ggctcgtgag
     6361 cctgcgggtc agccgcttcg atcccgccaa ctggtcatgt gtagctttca agaactggtg
     6421 ctggcggaca gaccacttgc gcgccacagt acgggcatgc ttcatcggcc cccggttctc
     6481 ctcctggcgt tgggcctggc cgcctgctcc gcccgggacg gtctcctcac cccgggcgag
     6541 gccgagccca gccgcgccct cgggatctgg cggccgggtc cctacgacag ttgcagccgg
     6601 gagcagcacg atgcctacgc cgtgctcggc cccgacggca gggcctaccc cacctggcac
     6661 cccccgaccg gacccggcgg ctgcagcttc gggcacgagc acggccgcga tccggccggc
     6721 tccgacctgt acgaccccga ggtcggcgtg cccttcgggg tcgccaatga gatgctcgcc
     6781 ctcgccgatc ccgcgcaccc gcgggacgag gatcacgtcg gtcacaaggt ggaatgggag
     6841 aacgatctcg agctcgccct ctcgggcgcc ggcgcgccgg cttcgaccac ggtgtgcgac
     6901 gtcctgctga agctccacca gggtaccc
//
LOCUS       DASUYN010000516         3169 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_606340, whole genome shotgun sequence.
ACCESSION   DASUYN010000516 DASUYN010000000
VERSION     DASUYN010000516.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3169)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3169)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3169
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_606340"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..692)
                     /locus_tag="VF061_10055"
     CDS             complement(<1..692)
                     /locus_tag="VF061_10055"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX6669892.1"
                     /translation="MKILLLAPQPFFQARGTPIAVRLVLEFLSARGHQVDLLTYHEGS
                     DVEIPNCRIARIPALPGVRNIRPGFSIKKVLCDGVMFFSCARMMRRTRYDLVHAVEES
                     AFIAAALRSFTGVPYVYDMDSSLAEQLIDAFPVLKLLGPLLHRCEAVAIRRSVGVLTV
                     CAALQDLARRHAPTTPVGRVEDTTLLAPAGATNGGRHLPPETAGAPVAMYVGNLEHYQ
                     GIDLLLEGFRHTV"
     gene            1036..2253
                     /locus_tag="VF061_10060"
     CDS             1036..2253
                     /locus_tag="VF061_10060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX6669893.1"
                     /translation="MHEELMATAAPTSQFAGVDFLDFDRLLAEEERAVRDTVRTWVDE
                     NLIPVIGEAYIEGRFPKQLIGGMAELGLFGANLPEEYGCAGLNNVAYGLIMQELERGD
                     SGIRSFASVQGALVMYPIYAFGSDQQKQKWLPLLASGQEVGCFGLTEPDYGSNPSGMI
                     TTARETRDGWVLNGTKMWITNGSQATVSIIWAKTGDVKDVRSIRGFIVPTDTKGYTGK
                     DQKGKLSLRASDTSEIHLQDVQLPKDAILPKSAGIKSPLMCLTQARYGIAWGAIGAAM
                     ACYDEALRYAQQRVMFDRPIAQTQIQQVRLVDMLTEIVKAQFMTLQLGRLKDGGSMTP
                     DQVSLCKRNNVSMACDIAREARRLLGANGILAEYHSMRHMANLESVYTYEGTHDMHSL
                     IVGQAITGLGAFQ"
     gene            2320..2553
                     /locus_tag="VF061_10065"
     CDS             2320..2553
                     /locus_tag="VF061_10065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669894.1"
                     /translation="MADRLSVSWQGSEYEVVRRDGREALPEPGPVWQVTRDGAPVTSF
                     PAQDREGPEAVREKVLEWLRANESRPEADVGRQ"
     gene            2640..>3169
                     /locus_tag="VF061_10070"
     CDS             2640..>3169
                     /locus_tag="VF061_10070"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX6669895.1"
                     /translation="MSAPELPAPPGSPPAQAAETLCREWYQSYGTSVYNYFRFHVPLP
                     DVAEDLTAETFLKVVRAADRFDPARGTPKAWILTVARNVLGDWRRRSRLRQYVTLGTM
                     HDLVYEAPSPEERLLREEEVGRLLDAVASLGEADRELIGLRYGSGLDTAEVAQILGVS
                     EGSVRTRLWRALGRLRG"
BASE COUNT          514 a         1069 c         1114 g          472 t
ORIGIN      
        1 acggtatgcc ggaagccctc cagcagcagg tcgatgccct ggtagtgctc gaggttgccg
       61 acgtacatcg cgacgggagc gcctgccgtc tccggcggca gatgcctgcc gccgttggtg
      121 gcgccggcgg gcgccaggag cgtcgtgtcc tccacccggc ccaccggcgt ggtgggcgcg
      181 tggcggcggg cgaggtcctg gagggcggcg cacacggtca gcaccccgac gctccggcgg
      241 atcgcgacgg cctcgcaccg gtgcaggagc ggccccagca gcttcagcac cggaaaggca
      301 tcgatcagct gctcggccag cgaggagtcc atgtcgtaga cgtagggcac gcccgtgaag
      361 gaccggagcg cggcggcgat gaatgccgat tcctcgaccg cgtgcaccag gtcgtaccgc
      421 gtccggcgca tcatgcgggc acagctgaag aacatcacgc cgtcgcagag gaccttcttg
      481 atggagaatc ccggccggat gttgcggacc ccggggagcg ccgggatccg cgcgattcgg
      541 cagttcggga tctcgacgtc gctcccctcg tgataggtca gcaggtccac ctggtgtccg
      601 cgggcgctga gaaactcgag aaccagacgc acggcgatcg gggtgccgcg agcctggaag
      661 aagggctggg gggcgaggag gagaatcttc accgcggacc ggcctcacgg gccggggcgg
      721 tccacaggcc aagcggcgta cctacctccg gcacatgggg atagacctca acgacacggg
      781 tgatgcaccc ggaagtgagt agtcgcttcg gtacgccaaa cggcatccgg cgacgggagc
      841 gccggctgtc gaatgaacgc ctcgagtcga gagcggcagc ctgccactcc tcgcgggttt
      901 tcgtgtgtgg gaactgggct actaagctca cgcgccccgt ggtgccgcgc aaggggcgcg
      961 aaggcgaggt gccggtcccg tctctgccgc ccggtcggcc cccgggctat cttacgccct
     1021 gctcaccaac cgcccatgca cgaggagctt atggccaccg ccgcgcccac ctctcagttc
     1081 gccggggtcg attttctcga cttcgaccgc ctcctcgccg aggaggagcg cgcggtgcgc
     1141 gacaccgtcc ggacctgggt ggacgagaac ctcatcccgg tcatcgggga ggcctatatc
     1201 gaggggcggt tccccaagca gctcatcggc gggatggccg agctgggcct cttcggggcc
     1261 aacctcccgg aagagtacgg ctgcgccggg ctcaacaacg tcgcctacgg gctcatcatg
     1321 caggagctgg agcgggggga ctcgggcatc cggtcgttcg cctcggtaca gggcgcgctg
     1381 gtgatgtatc cgatctacgc cttcggctcc gaccagcaga agcagaaatg gctgccgttg
     1441 ctcgcctcgg gccaggaggt cggctgtttc ggcctgaccg aaccggacta tggctccaac
     1501 cccagcggca tgatcaccac cgcccgggaa acccgggacg gctgggtgct gaacggcacc
     1561 aagatgtgga tcaccaacgg gtcccaggcg acggtgtcga tcatctgggc gaagaccggc
     1621 gacgtcaagg acgtccggtc catccgcggc ttcatcgtcc ccaccgacac caagggctac
     1681 accgggaagg accagaaggg gaagctctcg cttcgcgcca gcgacaccag tgagatccat
     1741 ctgcaggacg tccagcttcc caaggatgcg atcctgccca agtcggctgg gatcaagagt
     1801 ccgctcatgt gtctcaccca ggcgcgctac ggcatcgcct ggggcgcgat cggggcggcc
     1861 atggcctgct acgacgaggc gctgcggtac gcgcagcagc gagtgatgtt cgaccgaccc
     1921 atcgcgcaga cgcagatcca gcaggtgcgt ctggtggata tgctcaccga gatcgtgaag
     1981 gcgcagttca tgaccctgca gctgggccgg ctcaaggatg ggggcagcat gacgccggac
     2041 caggtctccc tctgcaagcg gaacaacgtg agcatggcct gcgacatcgc gcgcgaggcc
     2101 cgacggctgc tcggcgccaa cggcatcctg gccgagtatc actcgatgcg gcacatggcc
     2161 aacctggagt cggtctatac ctacgagggc acccacgaca tgcactccct catcgtgggc
     2221 caggcgatca ccgggctcgg cgccttccag tgagttggct caccgctccg cggccgtccg
     2281 tcggccaccc ttgggtgacg acttcacgtg gagggtgcga tggcggaccg actgtcggtg
     2341 tcgtggcagg gcagtgagta cgaggtggtg cggcgggacg ggcgcgaggc actccccgag
     2401 ccggggcccg tctggcaggt gacacgcgac ggcgccccgg tcaccagctt cccggcgcag
     2461 gaccgggagg gaccggaggc agtgcgggag aaggtgctgg agtggctccg tgccaacgag
     2521 tcccggcccg aggccgacgt gggccggcag taggacgcgc ctctacaggg atctcccagg
     2581 gcgggcccgc gtgacgcgcg ggcccttcgc gcgtaatccg taccgtgagt ctgccattcg
     2641 tgtctgctcc tgagctgccc gcacccccag gttccccgcc tgcccaggcc gcggagacgc
     2701 tctgccgcga gtggtaccag tcgtacggga cctcggtcta caactatttc cgcttccatg
     2761 tcccccttcc cgacgtcgcg gaagacctca ccgcggagac cttcctgaag gtggtccgcg
     2821 ccgccgaccg gttcgaccct gcccgcggca cgccgaaggc gtggattctc actgtggccc
     2881 gcaatgtcct gggtgactgg cgccggcgat cgcggctgcg gcagtacgtc accctcggca
     2941 ccatgcacga cctggtctac gaggccccat cgcccgagga gcggctgctg cgggaggagg
     3001 aggtcgggcg cctgctggat gccgtcgcga gcctgggcga ggcggaccgc gagctgatcg
     3061 gcctccggta cggcagcggc ctcgacaccg ccgaggtcgc gcagatcctc ggggtcagcg
     3121 aggggagcgt ccgcacccgc ctctggcgcg cgctcggccg gctgcgcgg
//
LOCUS       DASUYN010000517         3443 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1490253, whole genome shotgun sequence.
ACCESSION   DASUYN010000517 DASUYN010000000
VERSION     DASUYN010000517.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3443)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3443)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3443
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1490253"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..927)
                     /gene="tyrS"
                     /locus_tag="VF061_10075"
     CDS             complement(<1..927)
                     /gene="tyrS"
                     /locus_tag="VF061_10075"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004831 - tyrosine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006437 - tyrosyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HEX6669896.1"
                     /translation="MTDLLRTLTARGFVQDATPGLAERLSKGTVTAYVGFDPTANSLH
                     VGSLVPVMGLAWLQRFGHTPIALVGGGTGMVGDPSGKREERPVMSLEQLDRNARGLAR
                     QLTRFLSFEGANAARMRNNADWLRGIPLMEFLRDTGKHFTLSYMLQKESVRSRMEVGI
                     TYTEFSYMLIQAYDFWHLYRTERCEVQMGGSDQWGNITAGIELIGRREGAQAHGLVFP
                     LITTAAGAKFGKSESGNVWLDPERTSPYQFYQFWVNTDDRDVERYLKFFTFLRLDQIE
                     GAMAEHARDPGRRAAQRLLAREVTATVHGVDAA"
     gene            1015..3279
                     /locus_tag="VF061_10080"
     CDS             1015..3279
                     /locus_tag="VF061_10080"
                     /inference="COORDINATES: protein motif:HMM:TIGR02074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PBP1A family penicillin-binding protein"
                     /protein_id="HEX6669897.1"
                     /translation="MRLSPRARRNIVVSLLAVVAFGLAVLMAAWNRACAGNSCPSIAE
                     LGAYDPNQASKVYAADGRLITDLGQERRTVVPLAEMSPVVKAAFIATEDKRFYEHDGI
                     DWYRVFGAIRSNLIEMRVAEGFSTITMQLARNIWTEDISGRDKSLRRKLREAKVAREI
                     EEKYPKDQILELYLNQIDLGNRAFGVEAASQRYFGKSVRDLNVAEAATLAAIPKAPSR
                     YNPRKNPNLSIQRRNTVLNLLRDNSLLSAEETERWKAYPLLLSSSSDYSGTAEYFVEF
                     VRQQLDARFGSDLYRSGYRIYTTLDLDTQQAAERALEARLEAIESGADGKFEHPTYQQ
                     FQNSRADEGEEPDLRTTPYLQGLVVTIEAGTGQIRAMVGGRDFGDSKFNRATQALRQP
                     GSTFKPITYAAAIEAGYPLSHVMVDDSLSLLVKPDEPPWTPQNYDLQYDGPMTLRRAL
                     YLSRNTIAIKLGMELGEQSVVSEAAKFGISTRVPPVPSIHIGSADVIPLELIAAYTTF
                     ANLGTRTVPNSILRVEDRSGRIIWQPTARTVSVLDSAHAWLMTDALRDVVRHGTAVGT
                     VGARINFPAGGKTGTTNDGFDVWFIGFTPDLVTGVWIGFDQPRKIKSNAQGGVLAAPA
                     WTAMMREVYERRAIPAAWPRPSGLSALDIDKTTGYKATPFCPKDVHYIESFIPGTEPT
                     GFCPIHSPFGNVGGIMGGSGPAPSPGQAPSTAPAVGVPKADTVGAPLVPTRSTQGGAS
                     GVMGGSGPASTPPR"
BASE COUNT          535 a         1246 c         1150 g          512 t
ORIGIN      
        1 cgccgcgtcc actccatgca ccgtcgcggt cacttcgcgg gccaggaggc gctgggcggc
       61 gcgccggccg gggtcccggg cgtgctccgc catcgcgccc tcgatctggt cgagccggag
      121 gaaggtgaag aacttgaggt agcgctccac gtcgcggtcg tcggtgttga cccagaactg
      181 gtagaactga tacgggctgg tgcgctcggg gtcgagccac acgttgccgc tctcgctctt
      241 gccgaacttg gcgccggcgg cggtggtgat gagcgggaac accaggccgt gcgcctgggc
      301 tccctcgcgc cggccgatca gctcgatacc ggcggtgatg ttcccccact ggtcgctgcc
      361 gcccatctgg acctcgcacc gctccgtccg gtagaggtgc cagaagtcgt aggcctggat
      421 cagcatgtag ctgaactcgg tgtaggtgat ccccacctcc atccggctcc gcaccgactc
      481 cttctgcagc atgtagctca gggtgaagtg tttgcccgtg tcgcggagga actccatgag
      541 cgggatgccg cggagccagt cggcgttgtt gcgcatccgc gcggcgttgg ccccctcgaa
      601 cgagaggaac cgggtgagtt gtcgcgccag gccgcgggcg tttcggtcga gctgctccag
      661 gctcatgacc ggccgctctt cccgcttgcc gctggggtcg cccaccatcc cggtcccgcc
      721 gcccaccagc gcgatgggcg tgtggccgaa gcgctggagc caggccagcc ccatgaccgg
      781 caccaggctg cccacgtgca gcgagttggc cgtcgggtcg aacccgacgt aggcggtgac
      841 ggtgcccttc gacagacgct cggccagccc cggagtggcg tcctgcacga acccccgggc
      901 ggtgagcgtg cgcagcagat cggtcatagg cgcgtatcgt acccgctgga aacaggcccc
      961 gcaacaggct agtttgcgac catggcccgc cggctcacat cacttgccac gcgcgtgagg
     1021 ctttcgcccc gcgcgcgtcg caacatcgtg gtctccctcc tcgccgtggt cgcgttcggg
     1081 ctggccgtgc tgatggcggc ctggaaccgc gcctgtgccg gcaacagctg tccctccatc
     1141 gccgagctgg gcgcctacga tcccaaccag gcctcgaagg tttacgccgc cgacggccgg
     1201 ctcatcaccg acctgggcca ggagcggcgc acggtggtcc cgctggccga gatgtcgccg
     1261 gtggtcaagg cggcattcat cgcgaccgag gacaagcggt tctacgagca cgacggcatc
     1321 gactggtacc gcgtgttcgg cgcgatccgg agcaacctga tcgagatgcg ggtcgcggag
     1381 ggcttctcga ccatcacgat gcagctggcg cggaacatct ggaccgagga catcagcggc
     1441 cgcgacaagt cgctccgccg caagctccgg gaagcgaagg tcgcccgcga gatcgaggag
     1501 aaatacccca aggaccagat cctcgagctc tacctcaacc agatcgacct cggcaaccgc
     1561 gccttcgggg tggaggcggc ctcccagcgg tacttcggga agtcggtccg ggacctgaac
     1621 gtcgccgaag cggccaccct cgccgccatt cccaaggccc cctcccgcta caacccacgg
     1681 aagaacccca atctcagcat ccagcgccgc aacacggtgc tgaacctgct gcgggacaac
     1741 agcctcctct cggcggagga gaccgagcgg tggaaggcct atccgctgct cctctcttcc
     1801 agctcggact acagcggcac ggcggagtat ttcgtggagt tcgtgcgcca gcagctggac
     1861 gcgcgcttcg gctccgacct ctaccgctcc ggctaccgga tctacaccac gctggatctg
     1921 gacacccagc aggccgccga gcgggcgctc gaggcccggc tggaggcgat cgagagcggc
     1981 gccgacggca agttcgagca ccccacctac cagcagttcc agaactcccg tgcggacgag
     2041 ggcgaggagc cggatctccg gaccacgccc tacctccagg ggctggtggt gacgatcgaa
     2101 gccggcaccg ggcagatccg cgccatggtg ggcggtcggg acttcggcga cagcaagttc
     2161 aaccgcgcca cccaggcgct gcgccagccc ggctccacct tcaagccgat cacctacgcg
     2221 gccgcgatcg aggcgggcta cccgctgtcc cacgtgatgg tggacgactc gctcagcctc
     2281 ctcgtgaagc cggacgagcc gccctggacg ccgcagaact acgacctgca gtacgacggc
     2341 ccgatgacgc tgcgccgggc gctctatctg tcccggaaca ccatcgccat caagctgggc
     2401 atggagctgg gggagcagtc ggtcgtgagc gaggccgcga agttcggcat cagcacccgg
     2461 gtgccgccgg tgccctccat ccacatcggc tcggccgacg tcatccccct ggagctgatc
     2521 gccgcctaca ccaccttcgc caacctgggc acccgcacgg taccgaactc catcctccgg
     2581 gtggaagacc gcagcggcag gatcatctgg cagccgacgg cgcggacggt gtccgtgctc
     2641 gacagcgcgc atgcctggct catgaccgat gcgctccgcg acgtggtccg ccacggcacc
     2701 gcggtcggca cggtcggcgc gcggatcaac ttccccgccg gcggcaagac cgggaccacc
     2761 aacgacggct tcgacgtgtg gttcatcggg ttcaccccgg atctggtcac cggggtgtgg
     2821 atcggcttcg accagccgcg caagatcaag tcgaacgcgc agggcggcgt gctggccgca
     2881 cccgcctgga ccgccatgat gcgggaagtc tacgagcgcc gggccatccc ggcggcgtgg
     2941 ccccgtccct ccggcctttc cgcgctcgac atcgacaaga ccacgggcta caaggcgacg
     3001 ccgttctgcc ccaaggacgt ccattacatc gagtcgttca tccccggcac cgagccaacc
     3061 ggattctgcc ccatccactc cccgttcggg aacgtcggcg gcatcatggg gggcagcggt
     3121 cccgctccgt ccccgggcca ggcgccttcc accgcaccgg cggtcggcgt cccgaaggcc
     3181 gatacggtcg gagccccgct ggtgcccacc cgttccaccc agggcggagc cagcggcgtc
     3241 atgggtgggt ccggccccgc gtccactccc ccgcgttagc atgcccgcgc gccgcctggc
     3301 ggcccgctgg gtagtgcccg tcgccgggcc cgcgttcgag tgcggtgcgg tgctggtggg
     3361 cggggacggc cggatcgaag cggtggggcc ggacgcgtcg gtgccctcgc cggcgggagt
     3421 gcccggcgag cagtaccccg acg
//
LOCUS       DASUYN010000518         2510 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_826559, whole genome shotgun sequence.
ACCESSION   DASUYN010000518 DASUYN010000000
VERSION     DASUYN010000518.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2510)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2510)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2510
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_826559"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1195)
                     /locus_tag="VF061_10085"
     CDS             complement(<1..1195)
                     /locus_tag="VF061_10085"
                     /EC_number="2.3.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008890 - glycine C-acetyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine C-acetyltransferase"
                     /protein_id="HEX6669898.1"
                     /translation="MTNALERRLEGELEQFIRDGVYKRLNFLDSPQAPRVKMEGRGEV
                     IILSSNNYLGLCAQPEVIEAGKAALDRWGAGTASVRFICGTFTVHRALENACARLVGT
                     PAALSFVSAWNANEAVPATLLGEEDIVISDQLNHASIIDGVRLAKAITKCQTAVYKHA
                     DLADLEARLTAARDRRVRLVITDGVFSMEGAIAKLPDLLEVCRRHHALLMVDDSHGTG
                     VLGATGRGTAEHFGVVGDVDIITSTLGKALGGAAGGFAGASAAVCDYLTQRARPQLFS
                     NALPPTVAASSLASIEYLEAHPERVTRLRDQARYFRERLLELGFTPLPGETPIIPVIL
                     GETSAAIRMSDLLLAEGVFVTGFGYPVVPQGQARVRCQISAAHTKEDLDQALAAFAKV
                     GRLLGL"
     gene            complement(1192..2232)
                     /gene="tdh"
                     /locus_tag="VF061_10090"
     CDS             complement(1192..2232)
                     /gene="tdh"
                     /locus_tag="VF061_10090"
                     /EC_number="1.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008743 - L-threonine 3-dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006567 - threonine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonine 3-dehydrogenase"
                     /protein_id="HEX6669899.1"
                     /translation="MRALVKAGPGPGMVLREVPKPTCGSTEVLIRVHHAGVCGTDLHI
                     WEWDSWASNRLKPPVVVGHEFAGEIVELGREAEATELLAPGDLVTAEGHIVCGHCLQC
                     RLGDAHLCQRTQIIGVDRDGAFADYIAMPASNVMKLDGIPTEVGAIMDPMGNAVHTVL
                     EARVPGSTVFVLGCGPIGCFAVGVARAAGASLVIASDFNPRRLDLARTMGAHVTLDPA
                     RDDVLGRIRELTGGDGVDLVCEMSGHPDGHATAFAAARLGGRVNLLGTPSRTTDTDFA
                     RDVIFKGLTLYGVTGRKMYETWHQMRRFLHAGQLDPRPVITHRFPLACIGDAIQVIKT
                     GQAGKVILEVAT"
BASE COUNT          386 a          863 c          886 g          375 t
ORIGIN      
        1 tcagcccgag cagccgtccc actttggcga acgccgccag cgcctgatcc agatcctcct
       61 tcgtgtgcgc cgccgagatc tggcagcgga cgcgggcctg accctggggc acgacggggt
      121 agccgaaccc ggtgacgaac acaccctcgg ccagaaggag atcgctcatc cggatcgcgg
      181 ccgaggtctc gccgagaatg acggggatga tcggggtctc gccgggaagc ggcgtgaagc
      241 ccagctccag cagccgctcg cggaaatagc gggcctggtc gcggagccgg gtcacccgct
      301 ccggatgggc ctcgaggtac tcgatgctcg cgagcgagct ggccgccacg gtgggcggca
      361 gggcgttgga gaacagctga ggccgggccc gctgggtgag gtagtcgcac accgcggcgg
      421 acgcccccgc gaatcccccg gccgctccgc cgagcgcctt gcccagggtg gaagtgatga
      481 tgtccacgtc gcccacgacc ccgaaatgct ccgccgtgcc ccggcccgtg gcgccgagca
      541 cccccgtgcc gtgggagtcg tccaccatca gcagcgcatg gtgtcggcgg cagacctcca
      601 gcaggtcggg cagcttcgcg atcgcgccct ccatcgagaa cacgccgtcg gtgatcacca
      661 accgcacccg ccggtcgcgc gcggccgtca gcctggcctc caggtcggcg aggtcggcgt
      721 gcttgtagac cgcggtctgg cacttggtga tggccttggc cagcctcacg ccgtcgatga
      781 tcgaggcgtg gttgagctgg tcgctgatga cgatgtcctc ctcgcccagc agcgtggccg
      841 gcaccgcctc gttcgcgttc cacgcgctca cgaacgacag cgcggccggc gttcccacca
      901 gccgggcgca ggcgttctcg agcgcccggt gcacggtaaa ggtgccgcag atgaagcgga
      961 ccgacgccgt gcctgcgccc cagcggtcga gcgccgcctt tccggcctcg atcacctccg
     1021 gctgcgcgca gaggcccagg tagttgttgg aggagagaat gatgacctcg ccccgcccct
     1081 ccatcttcac cctcggcgcc tgggggctgt cgaggaagtt gagccgcttg tacaccccgt
     1141 cgcgaatgaa ctgttccagc tcaccctcga gccggcgctc gagtgcgttg gtcatgtcgc
     1201 gacctccagg atgaccttgc cggcctggcc ggtcttgatg acctggatcg cgtcgccgat
     1261 gcatgccagc gggaagcggt gggtgatgac ggggcggggg tcgagctggc cggcgtggag
     1321 gaagcggcgc atctggtgcc aggtctcgta catcttgcgg ccggtgaccc cgtagagcgt
     1381 gagccccttg aagatgacgt cccgggcgaa gtcggtgtcc gtggtccggc tgggcgtgcc
     1441 cagcaggttg acccggcccc ccaggcgcgc cgcggcgaac gccgtcgcgt ggccgtcggg
     1501 atggccgctc atctcgcaca ccagatccac gccgtcgccg ccggtgagct cacggatgcg
     1561 gcccagcacg tcgtcgcggg ccgggtcgag cgtcacgtgg gcgcccatcg tccgcgccag
     1621 gtccagccgg cgggggttga agtcgctggc gatcaccagc gaggcgccgg cggcgcgggc
     1681 cacgcccacg gcgaagcagc cgatcgggcc gcagcccagc acgaacaccg tgctgccggg
     1741 gacccgggcc tcgaggaccg tgtgcaccgc gttgcccatc ggatccatga tggcgccgac
     1801 ctcggtgggg atgccgtcga gcttcatcac gttggaggcg ggcatcgcga tgtagtcggc
     1861 gaaggcaccg tcgcggtcca caccgatgat ctgggtccgc tggcagaggt gcgcatcccc
     1921 gagccggcac tggaggcagt ggccgcagac gatgtggccc tcggccgtca ccagatcgcc
     1981 cggggccagc agctcggtcg cctccgcctc ccggcccagc tccacgatct cgccggcgaa
     2041 ctcgtgcccc acgacgaccg gcggcttgag ccggttgctg gcccagctgt cccattccca
     2101 gatgtggagg tcggtgccgc agaccccggc gtggtggacg cggatcagga cctcggtgga
     2161 cccgcaggtg ggcttgggga cctcgcgcag caccatgccg gggccggggc ctgccttcac
     2221 cagagcgcgc aaaccgagtc caggtaggaa gtcgggcgga aaagtagtag aaaagacgtg
     2281 aaaggtgaaa cgtgaacggt gaaaaggaga aatcgattcc ccttgtcacc gttcacgttt
     2341 caccgttcac acttcttggg cgaccgacgc gggtccggcg aacgcccgcg aattcgccgg
     2401 ctcgatccgc accgcgctga tcttgaacga cgcgatccgg gcgtacgggt cgagctgcgg
     2461 attggtcagc aggttggcgg ccgcttcccg gaagtgcatc ggcatgaaga
//
LOCUS       DASUYN010000519         2647 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_826865, whole genome shotgun sequence.
ACCESSION   DASUYN010000519 DASUYN010000000
VERSION     DASUYN010000519.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2647)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2647)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2647
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_826865"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2647
                     /gene="uvrA"
                     /locus_tag="VF061_10095"
     CDS             <1..>2647
                     /gene="uvrA"
                     /locus_tag="VF061_10095"
                     /inference="COORDINATES: protein motif:HMM:TIGR00630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HEX6669900.1"
                     /translation="GPSGSGKSSLAFDTLYAEGQRRYVESLSTYAKQFLERMPKPQVD
                     RLEGLAPSVAIEQRNPVVSSRSTVGTATEIYDHLRLLWARIGRSYCRVCGAPVRVDTP
                     QSAADAVLASGAARVQVVFPLPPIARLAHAAVVENLRALGFVRVIADGASHHLDDLPR
                     TLDLTRAAELLIVVDRLTCSPGSLGRISEAIAVAFQEGEGVGLAILDSGRLRFTRAPS
                     CSACDTPAAAVTPALFSFNNPRGACAACNGFGAVLEYDESLIVPDQRCSLADGAIDPW
                     TKPRYETRRRILLDFARSVGADPNKPWGKLKAAHRRELLYGRKGRYVGIFPFLKDLEE
                     KRYKQYIRVFLRQYQLAKTCGECGGTRLNPDALAVRIAGETIAEVAARPVDGIHEWLR
                     TLELTPFEREVAHLILEQLDARLSFLRDVGLGYLSLDRQTRTLSGGEAQRISLSNALG
                     ARLVDTLYVLDEPSVGLHPRDTDRLLALLRRLRDGGNTVVVVEHDLSAIQQADFMLEL
                     GPGAGERGGRVVHAGPVAGATQSLTGQYLTGQKRIAVPSLRRPAGPMWLKVRGATLHN
                     LRGVDVDIPLGALTAVTGVSGSGKSTLLHDVMYRNLEAKLRGGHSAKSHLGEEVGSVD
                     GLTGWELLQDVLLIDQSPIGRSPRSNPITYIKAFDEIRELFAAQPLARQRKYSGSTFS
                     FNMPGGRCEECEGAGHVQVEMVFLADVFVPCEACGGSRYQREVLDVKIHGRSIHDVLQ
                     WTVEEAIARFRHQPRLGTALWHLQQVGLGYLRLGQPATTLSGGEAQRLKIARELIHAG
                     KREGRKLYILDEPTTGLHLDDVRVLIQVLDRLVDAGHTVVVIEHHLDMIKRADWIVDL
                     GPEAGDGGGRVVAQGVPEEIAECEAS"
BASE COUNT          378 a          945 c          949 g          375 t
ORIGIN      
        1 ggggccgagc ggctccggca aatcatcgct tgcattcgac acgctgtacg cggagggaca
       61 gcgccgctac gtcgagtcgc tgtccaccta cgccaagcag ttcctcgagc ggatgcccaa
      121 gccccaggtg gaccgtctgg agggtctggc tccctcggtg gccatcgagc agcggaaccc
      181 ggtggtctcc agccgctcga cggtgggcac cgccaccgag atctacgacc acctccggct
      241 cctgtgggcc cggatcgggc gcagctactg ccgggtgtgc ggggcgccgg tgcgggtgga
      301 caccccccag tcggcagccg atgccgtcct ggcctccgga gccgcgcggg tacaggtcgt
      361 cttccccctc ccgccgatcg cccgcctggc gcacgcggcc gtggtggaga acctgcgcgc
      421 gctcggcttc gtccgggtga tcgccgacgg cgcgtcgcac cacctcgacg atcttccccg
      481 gacgctggac ctcacccggg ccgccgagct cctcatcgtg gtggaccggc tgacctgctc
      541 gcccgggtcg ctgggccgca tctccgaggc gatcgccgtg gcgttccagg agggcgaggg
      601 ggtcgggctc gcgatcctgg acagcggccg cctccgcttc acccgggcgc cgtcctgcag
      661 cgcctgcgac acgccggcag cggccgtcac gcccgcgctc ttctccttca acaatccgcg
      721 gggggcctgc gccgcgtgca acgggttcgg ggcggtgctg gaatacgacg aatcgctcat
      781 cgttcccgac cagcggtgca gcctcgccga cggggcgatc gacccctgga ccaagccgcg
      841 gtacgagacc cgccgccgca tcctcctcga cttcgcccgc agcgtcggcg ccgacccgaa
      901 caagccctgg ggcaagctca aggctgccca ccgccgcgag ctgctctacg gccgcaaggg
      961 gcggtatgtc gggatcttcc ccttcctcaa ggatctggag gagaaacgct acaagcagta
     1021 catccgggtc ttcctccggc agtatcagct cgcgaagacc tgcggcgagt gcggcggcac
     1081 ccggctcaac ccggacgccc tggcggtgcg gatcgccggg gagaccatcg ccgaggtggc
     1141 ggcgcgcccg gtggacggga tccacgagtg gctgaggacc ctcgagctga ccccgttcga
     1201 gcgcgaggtg gcccacctga tcctggagca gctggacgcc cggctgagct tcctgcgcga
     1261 cgtgggcctg gggtacctgt ccctcgaccg gcagacccgc acgctctccg gcggcgaggc
     1321 gcagcggatc tcgctgtcca acgcattggg ggcccggctg gtggatacgc tgtacgtgct
     1381 ggacgagccg tcggtggggc tccacccgcg ggacaccgac cggctcctgg ccctgctccg
     1441 gcggctccgc gacggcggga acaccgtcgt ggtggtggag cacgacctct ccgcgatcca
     1501 gcaggccgac ttcatgctcg agctcggccc cggcgcgggc gagcggggcg ggcgggtggt
     1561 gcacgcgggt ccggtcgccg gcgcgacgca gtcgctcacc gggcagtatc tcaccggaca
     1621 gaagcggatc gcggtcccca gcctgcgccg gccggccgga ccgatgtggc tcaaggtgcg
     1681 cggcgccacg ctccacaacc tgcgcggcgt ggacgtggac atcccgctgg gcgccctcac
     1741 cgccgtcacc ggcgtgtccg gctcgggcaa gagcaccctg ctccacgacg tgatgtaccg
     1801 aaacctcgag gcgaagctgc gcggcggcca ctcggcgaag tcgcacctgg gcgaggaggt
     1861 cggcagcgtg gacggcctga ccgggtggga gcttctccag gacgtgctgc tgatcgacca
     1921 gtcacccatc ggccgctcgc cccgctccaa tccgatcacc tacatcaagg cgttcgacga
     1981 gatccgggag ctgttcgccg cgcagccgct ggcgcggcag cggaagtact cgggcagcac
     2041 cttctcgttc aacatgccgg gggggcggtg cgaggagtgc gagggagccg ggcacgtcca
     2101 ggtggagatg gtcttcctgg ccgacgtctt cgtcccctgc gaggcgtgcg gcggcagccg
     2161 ttaccagcgg gaggtgctcg acgtgaagat ccacgggcgc tcgattcacg acgtgctcca
     2221 gtggaccgtc gaggaggcga tcgcccgctt ccgccaccag cccaggctgg gcaccgcgct
     2281 ctggcacctc cagcaggtgg ggctcggcta tctccggctg ggccagcccg cgaccacgct
     2341 gtccggcggc gaagcgcagc ggctcaagat cgcgcgcgag ctgatccacg cgggcaagcg
     2401 cgagggccgc aagctctaca tcctggacga gcccacgacc ggcctgcacc tggacgacgt
     2461 ccgggtgctg atccaggtgc tcgaccgact ggtggacgcc gggcacacgg tggtcgtcat
     2521 cgagcaccac ctcgacatga tcaagcgcgc cgactggatc gtggacctgg ggcccgaagc
     2581 gggcgatggg ggcgggaggg tggtcgcgca gggggtgccg gaggagatcg ccgagtgcga
     2641 ggcgtcg
//
LOCUS       DASUYN010000520         2883 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1271243, whole genome shotgun sequence.
ACCESSION   DASUYN010000520 DASUYN010000000
VERSION     DASUYN010000520.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2883)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2883)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2883
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1271243"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..415)
                     /locus_tag="VF061_10100"
     CDS             complement(<1..415)
                     /locus_tag="VF061_10100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669901.1"
                     /translation="MRADAGPDPGMTAGTAPGPGEVVLVHAPTGRDSELIRTVLQGAG
                     HAAAVEPSIERLCQRMAEDCGVALIAEEALTPQAVARLLEALNNQPSWADLPLVVLTT
                     ALAMQHAEQPTLRTLRRHGNVTLLERPVHPLTVLSV"
     gene            complement(421..1953)
                     /locus_tag="VF061_10105"
     CDS             complement(421..1953)
                     /locus_tag="VF061_10105"
                     /inference="COORDINATES: protein motif:HMM:NF018455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase domain-containing protein"
                     /protein_id="HEX6669902.1"
                     /translation="MTDTPATRDPSTRNHLMPIGVPGLDHVLGGGLPPHHVFLIEGAP
                     GTGKTTLALRFLIEGAARGERTLYVTLAETRNELSNVARSHGWTLDGLEVLELTPPDE
                     VLQPETQYTVFHPSEVETGHTMRAIYDAAERVRPQRLVLDSLSEMRLITQEPLRLRRQ
                     VLALKQFFLGRGCSVLLLDDMRSADHDLQFASIAHGVILLEQLALEYGAERRRLRVTK
                     MRAQRYRGGFHDFVIRTGGIEVYPRLVASDYPVRDAGGPLRSGSQGLDRLMGGGLDRG
                     SITLFVGPAGVGKSVLSSQFIIAAAEAGERVAVYLFDERLRTFMQRAQGMGMDFPRHI
                     EAGRISIQQIDPAEVSPGQFSHQVVRAVEENDTRLVVIDSLSGYLNAMPEDRLLVIHL
                     HELFSYLTQRGATTIMTLAQQGLFAQGSNHGADVSYLADAIVLLRYFEAVGAVRQAVS
                     MIKKRGGDHEQMIREFRIAGGGLQLGEPLAEFQGVLTGVPRFLGRPDSLLEADDPPLM
                     ET"
     gene            2135..>2883
                     /locus_tag="VF061_10110"
     CDS             2135..>2883
                     /locus_tag="VF061_10110"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF015692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-ribosylglycohydrolase family protein"
                     /protein_id="HEX6669903.1"
                     /translation="MNDRATALTGCLLGQALGDALGFVVEARPYETARRYVEEYLRAG
                     RAGDLSHPDHPFGQYSDDTQLARELLLSVAEARGWCAEAFARRVSALFEDGRDVGAGP
                     GTRAAAARLRAGTHWSLAGTPAPYAGNGSAMRAGPLGLVFADTRAMVVVAVEQSLVTH
                     LDSRCAAGAVAVAAAVGLAANGRPIRPREFLGSVAALAGAQDETVASAILGLEAWAHL
                     PPDAATRWLHAEGLDPAFGEEWQGISSFVTP"
BASE COUNT          419 a          988 c         1047 g          429 t
ORIGIN      
        1 tcacactgag gacggtgaga ggatggaccg ggcgctccag cagtgtcacg ttgccgtggc
       61 gccgcagggt ccggagcgtc ggctgctcgg cgtgctgcat ggcgagcgcg gtggtgagca
      121 ccaccagggg caggtcggcc caggagggct ggttgttcag ggcctccaac agtcgcgcca
      181 ccgcctgcgg ggtcagcgcc tcctccgcga tgagggccac cccgcagtcc tcggccatcc
      241 gttggcagag ccgctcgatc gatggctcca ccgccgccgc gtgccccgcg ccctggagca
      301 cggtgcggat cagctccgag tcgcggccgg tgggcgcatg gacaagcacc acttcgcccg
      361 gaccgggggc ggtgccggcg gtcatgccgg ggtcggggcc ggcgtccgcc cgcatgccgt
      421 ctacgtctcc atcagcggcg ggtcatccgc ttcgagcagc gagtcggggc ggccgaggaa
      481 tcggggcaca ccggtcagca cgccctggaa ctcggccagc ggctcgccca gctgaagccc
      541 gccgccggcg atgcggaact cacggatcat ctgctcgtga tcaccgcccc gcttcttgat
      601 catggagacc gcctgtcgca ccgcgccgac cgcctcgaag tagcggagga ggacgatagc
      661 atcggccaga tagctcacgt ccgccccgtg gttggaaccc tgcgcgaaca ggccctgctg
      721 cgccagggtc atgatggtgg tcgccccgcg ctgggtgagg tagctgaaga gctcgtgcag
      781 gtggatgacc agcagccggt cctccggcat cgcattgagg tagccgctca gactgtcgat
      841 cacgaccagc cgggtatcat tctcctccac ggcgcgcacg acctggtggg agaactgccc
      901 cggggaaacc tcggcggggt cgatttgttg aatgctgatg cggccggcct cgatgtgtcg
      961 ggggaaatcc atgcccatcc cctgcgcccg ctgcatgaag gtgcggagcc gctcgtcgaa
     1021 caggtagacg gccacccgct cgccggcctc cgccgccgcg atgatgaact gactcgagag
     1081 cacggacttt cccactcccg cggggcccac gaacagagtg atggatccgc gatccagtcc
     1141 cccgcccatg agacgatcga ggccctggct gccgctccgc agcggcccgc cggcgtcccg
     1201 cacggggtag tcggaggcga cgagcctcgg gtacacctcg atgccgccgg tgcggatcac
     1261 gaagtcgtgg aagccgccac ggtatcgctg cgctcgcatc ttggtaacgc gcagtcgtcg
     1321 gcgctcggcc ccatactcca gcgcgagctg ttccagcagg atgacgccgt gggcgatgct
     1381 ggcgaactgg aggtcgtggt cggcgctgcg catgtcgtcc agcaggagca cggaacatcc
     1441 ccggccgaga aagaattgct tcagggcgag cacctgccgc cggaggcgca acggctcctg
     1501 ggtgatcaac cgcatctcgg agagggagtc gagcacgagg cgctggggcc gcacccgctc
     1561 ggccgcgtcg tagatggccc gcatcgtgtg gccggtctcg acctcggagg ggtgaaagac
     1621 ggtgtactgg gtctccggtt ggagcacctc gtcgggcggg gtcagctcga gcacctccag
     1681 gccatcgagc gtccagccgt ggctccgggc cacgttgctg agctcgttcc gggtttccgc
     1741 aagggtcacg tacagcgttc gctcgccccg ggccgccccc tcgatcagga accgcagcgc
     1801 cagggtagtc ttgcccgtcc ctggcgcacc ctcgatcaag aagacgtgat ggggcggcag
     1861 gccgccgccc agcacatggt ccaggccggg cacaccgata ggcatgaggt ggttgcgggt
     1921 gctcggatcc ctggtggcag gagtatcggt cattcggcat cgtcctgtcg ttggttcggg
     1981 cgcggctcac acgcgggcga gtgagcggac ccgcccggtg gtcccgcccc gcgtccgtct
     2041 tgtcgacctg ctcgggagac acgggggcag ccgaggttaa aatagggagg gcactggtga
     2101 ctcaaaccgt gacatccatc acccaacggg ttcggtgaac gatcgcgcga cggccctcac
     2161 cggctgcctg ctgggccagg cactgggcga cgccctcggc ttcgtggtcg aggcgcgccc
     2221 ctacgagacc gcccgccggt acgtggagga gtacctccgc gccggcaggg cgggggatct
     2281 ctcgcacccc gatcacccgt tcggccaata cagcgacgac actcagctcg cgcgggagct
     2341 gctgctgagc gtggcggaag ctcgaggttg gtgcgccgag gcgttcgcgc ggcgggtctc
     2401 ggcgctgttc gaggacggcc gggacgtggg ggcaggcccg ggcacgcgcg cggccgcggc
     2461 ccgcctccgg gccgggactc actggagcct cgccgggacg ccggcgccct atgcggggaa
     2521 cgggagcgcc atgcgcgccg gccccctcgg gctggtcttc gccgacacca gggccatggt
     2581 cgtggtcgcg gtcgagcaga gcctagtcac ccatctcgac tcccgctgcg cggccggcgc
     2641 ggtcgcagtg gccgcggcgg tcgggctggc ggcgaacggg agaccgatcc ggccgcggga
     2701 gttcctcggc tcggtcgcgg cgctggccgg cgcgcaggac gagacggtgg cctccgcgat
     2761 cctcggcctc gaggcctggg cgcacctccc acccgacgcg gccacccggt ggctgcatgc
     2821 cgaggggctg gatccggcct ttggggagga gtggcaaggc atctcgtcgt tcgtgacgcc
     2881 gag
//
LOCUS       DASUYN010000521         2461 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1271296, whole genome shotgun sequence.
ACCESSION   DASUYN010000521 DASUYN010000000
VERSION     DASUYN010000521.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2461)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2461)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2461
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1271296"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..396)
                     /locus_tag="VF061_10115"
     CDS             complement(<1..396)
                     /locus_tag="VF061_10115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669904.1"
                     /translation="MTLLAVLFYGNLTSPDEPVEHEVPHRYLVHDPQFSRTMSHLFGP
                     PVVSGNRITALQNGDQAFPAMLEAIRSAERSVNLEGYIFWDDTTGWAFADALSERARA
                     GVPTRLLVDWMGSQKLGDSLEQRMLEAGVR"
     gene            598..1017
                     /locus_tag="VF061_10120"
     CDS             598..1017
                     /locus_tag="VF061_10120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669905.1"
                     /translation="MRHGTNLTAAMLIALAACAGPAPEPADPSSVEVQGGELEARATE
                     GGLQLTNRGDAPAYYRARDPESLALSAPIPCPEPLNCPSVPAGSRVTVRFDEAIVGYR
                     PDTRRALVHWWHFVQRGDGSVATDEVRTLEVAFPLSP"
     gene            1102..1896
                     /locus_tag="VF061_10125"
     CDS             1102..1896
                     /locus_tag="VF061_10125"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX6669906.1"
                     /translation="MDADAVFRALADPTRRGLLDALFTRDGQSLSELVGRLRMTRFGV
                     MKHLRVLEEAGLVVTRRRGREKLHFLNPVPIRRIHDRWIDKYTEPLAAMLSGLKDDLE
                     GELMEKVFEIYIKTTPERLWQAITDPAMRAKYTFGVGVFSDWTPGSSYQSRTTELNGE
                     AGMPIGEGENLEVDPPRRLVQTFRALWSDEVKAEGFSRVTWEIEPVADSCRLTVTHDQ
                     LRAGANDELYGGWPMVLSGLKTLLETGEMLTTPASLMYLAPQPTGS"
     gene            complement(1969..>2461)
                     /locus_tag="VF061_10130"
     CDS             complement(1969..>2461)
                     /locus_tag="VF061_10130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669907.1"
                     /translation="VGHVPFRVEGTLGRVLLPFVFRIMFHRVLTVDTPIGRKARPKVV
                     SQGGPLIRVKPKDLESVGVRRVGRVSGVRDGLPVLDGGQVVEPANVVWCTGYHPGLSW
                     IDLPVFGPSGEPVQERGVAAGEPGLYFVGLHFLYALSSTMIHGVERDARRVVETIASR
                     TSP"
BASE COUNT          399 a          853 c          860 g          349 t
ORIGIN      
        1 ccggaccccg gcctccagca tccgttgctc gagcgagtcg cccagcttct gggatcccat
       61 ccagtccacc agcagccggg tgggcacccc cgcgcgggcg cgctcggaca gcgcgtccgc
      121 gaacgcccac cccgtcgtgt cgtcccagaa gatgtagccc tcgaggttga cgctccgctc
      181 cgccgaccgg atcgcctcga gcatcgcggg gaaggcctgg tcgccgttct gcagcgcggt
      241 gatccggttc ccggagacca cgggcggacc gaagaggtgg ctcatggtgc gggagaactg
      301 cgggtcgtgc acgagatacc ggtgcggcac ctcgtgctcc accggctcat cggggctggt
      361 gaggttgccg tagaacagga ccgcgagcag ggtcatggcc gaggcgaggg tggcccatgc
      421 ggcgcggctc gagcgcagcg tggcgagcgt ggggatggga gctcctgggt gtggatgggg
      481 tctaggaagg taccccgctt cgtcaccctc ggcacggcga agggggttat accggtggct
      541 gtcaccgatg aatcggcaca ggcgtctatc cattggacac tcacgcggag gctcgagatg
      601 cgccatggga ctaacctgac ggcggccatg ctgatcgccc tggcagcttg cgccgggccc
      661 gcgccggagc ccgcggaccc ctcgtccgtc gaggtccagg gcggcgagct cgaggcgcgg
      721 gccaccgaag gcgggctcca gctcaccaac cgcggcgatg cgccggcgta ctaccgggcc
      781 cgcgatcccg agagcctcgc gctgtcggca ccgattccct gccccgagcc cctcaactgt
      841 cccagcgtgc cggccggaag ccgggtcacc gttcggttcg acgaggcgat cgtcgggtac
      901 cggcccgaca ccaggcgggc gctggtgcac tggtggcact tcgtccagcg cggcgacggg
      961 tcggtcgcca cggacgaggt gcgcacgctc gaggtcgcct tccccctgtc accctgagcg
     1021 aagcaaaggg accatgcgca cgcatggcct cactcttctc caggcttgac atgtgaccaa
     1081 aaggtcacat attctctccc catggacgcg gatgcggtct tccgggcact ggccgatccc
     1141 acccgccgcg ggctgctcga cgcgctcttc acgcgcgacg ggcagagcct gagcgagctg
     1201 gtggggcggc tccggatgac ccgcttcggc gtcatgaagc acctgcgggt gctggaggag
     1261 gcaggactgg tggtcacccg acgccgcggc cgggagaagc tgcacttcct caatcccgtg
     1321 ccgatccggc ggatccacga ccggtggatc gacaagtaca ccgagcccct ggccgcgatg
     1381 ctcagcgggc tcaaggacga cctggagggg gagctcatgg aaaaggtctt cgagatctac
     1441 atcaagacga cgccggagcg gctgtggcag gccatcaccg acccggcgat gcgggccaag
     1501 tacacgttcg gcgtgggggt cttctcggac tggaccccgg ggtcctcgta ccagagccgg
     1561 acgaccgagc tcaacgggga ggcgggcatg ccgatcggcg agggcgagaa cctggaggtg
     1621 gatcccccgc ggcggctggt gcagaccttc cgggcgctgt ggagtgacga ggtgaaggcg
     1681 gaagggttct cgcgggtgac ctgggagatc gagccggtgg ccgactcgtg ccgtctcacc
     1741 gtcacccacg accagctgcg cgcgggcgcg aacgacgagc tctacggcgg atggccgatg
     1801 gtgctgagcg ggctcaagac gctgctggag acgggcgaga tgctcaccac gccggcgtcg
     1861 ctgatgtacc tggcccccca gccgaccggc tcctgagggg gcttcgactc catctgtcac
     1921 cctgaccgcg aaggggacca tgcccgcgca tggccccctt cgctgcgctc agggtgaggt
     1981 gcggctcgcg atcgtctcga cgacgcgcct ggcgtcccgc tcgaccccgt ggatcatggt
     2041 ggaggacaac gcgtagagaa aatgcagtcc cacgaagtac agtccgggct cgccggcggc
     2101 gacgccccgc tcctgcaccg gctcgccact cggcccgaac accggcaggt cgatccagga
     2161 gaggccggga tgatagccgg tgcaccagac cacattcgcc ggctcgacca cctggccccc
     2221 gtccagcacc ggaagtccgt cgcggacacc cgagacccgt cccacccgcc ggacccccac
     2281 cgactcgaga tccttcggct tgacccggat gagcggcccg ccctgcgaga ccaccttggg
     2341 gcgcgccttc cgcccgatcg gggtatccac cgtcagcacc cggtgaaaca tgatccggaa
     2401 gacgaagggc agcagcaccc gccccagggt gccctcgacc ctgaagggga cgtggccgac
     2461 g
//
LOCUS       DASUYN010000522         2154 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_827532, whole genome shotgun sequence.
ACCESSION   DASUYN010000522 DASUYN010000000
VERSION     DASUYN010000522.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2154)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2154)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2154
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_827532"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..618
                     /locus_tag="VF061_10135"
     CDS             <1..618
                     /locus_tag="VF061_10135"
                     /inference="COORDINATES: protein motif:HMM:NF020067.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsQ-type POTRA domain-containing protein"
                     /protein_id="HEX6669908.1"
                     /translation="SRLRSSPWVADATVSRTLPDTLRVEVRERAPLALAEVERLYLMD
                     ADGVLIDMYGPRTAGFDLPSVRGLGSVDVEARRDRAQRAGALLADLGELGAEVSEVEV
                     EDSGDLRVVLRGAGEVVRLGAPPYRSRLLTFLGLRQELAARCPDAEYFDLRFRDRIYA
                     KQPIKPVAPVEITPAPAVAAPPPVVPAAGPPAPRPSPQIAATQVG"
     gene            636..1883
                     /gene="ftsA"
                     /locus_tag="VF061_10140"
     CDS             636..1883
                     /gene="ftsA"
                     /locus_tag="VF061_10140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002634374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HEX6669909.1"
                     /translation="MSKKKDRYVVGLDIGTHKICAIVAEITEEGRLDVIGIGQAESKG
                     LRKGVVINLEATVESIKRVVEEAELMAGVEIGSAYVGLAGTHIRGFNSRGVIAVSGRN
                     RVIEREDVHRAIEAAKAVSIPMDREILHVLPQEFVVDDQDGIGDPTGMTGTRLEVNVH
                     IITCSQTAAQNTVTCVNRAGLEVIDTVLTQLAAAEACLTPDEKELGVALLDIGGGTTD
                     LAIFEKGSLWHTAVLQVGGEHFTNDVAVALRTPVNEAEKIKKKHGCALTSMVPEEDAI
                     EVPSVGGRKPRIMARQVLGDVLQARAEEICQMAFTEIRRSGFDRSLNSGVVLTGGGAI
                     LEGMAEIAEQIFDMPVRRGTPSGIGGLVDVVASPVYSTAVGLVLQGYRSRAGRGLSSS
                     RPAATGTFGKVTGRLMGWLSDFF"
     gene            1898..2104
                     /locus_tag="VF061_10145"
     CDS             1898..2104
                     /locus_tag="VF061_10145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669910.1"
                     /translation="MDVKREGAVFPPVPLPRPHEAEVVVPGSRVLRGQSELRCEMCGA
                     EVVAAHCKRICLKCGFMTGCSEGL"
BASE COUNT          324 a          710 c          824 g          296 t
ORIGIN      
        1 tcgcgcctgc gctcgagccc ctgggtggcg gacgccaccg tgtcgcgcac gctgccggac
       61 acgttgcggg tggaggtgcg tgagcgcgcc ccgctggccc tggccgaggt ggagcggctg
      121 tacctgatgg acgcggacgg cgtcctcatc gacatgtacg ggccgcgcac ggccggcttc
      181 gacctgccca gcgtgcgcgg gctgggcagc gtcgacgtgg aggcccgccg cgaccgcgcg
      241 cagcgcgcgg gcgccctcct ggccgacctg ggggagctgg gagccgaggt gtcggaggtg
      301 gaggtggagg actcgggcga cctgcgggtg gtgctgcggg gcgccggcga ggtggtgcgg
      361 ctgggcgccc cgccctaccg ctcccgcctg ctcaccttcc tgggcctgcg ccaggagctg
      421 gcggcgcgct gccccgacgc cgagtacttc gacctgcgtt tccgcgatcg catctacgcc
      481 aagcagccga tcaagccggt cgcacccgtc gagatcacgc ccgccccggc cgtggcggcg
      541 ccaccaccgg tggtgcccgc ggccggtccg ccggcgcccc ggccgtcgcc gcagatcgcg
      601 gcgacgcagg tgggatgaag ggagagagcg caaccttgtc caagaagaaa gaccgctacg
      661 tcgtcggcct cgacatcggc acccacaaga tctgcgccat cgtggcggag atcacggagg
      721 aggggcgcct cgacgtgatc ggcatcggcc aggcggagtc caagggcctg cgcaagggcg
      781 tcgtgatcaa cctggaagcc accgtcgagt ccatcaagcg ggtggtcgag gaagccgagc
      841 tgatggcggg ggtggagatc gggtccgcct acgtgggcct ggccggcacc cacatccgcg
      901 gcttcaactc gcggggcgtg atcgcggtca gcgggcgcaa ccgcgtgatc gagcgcgagg
      961 acgtgcaccg cgcgatcgag gcggccaagg cggtctccat ccccatggac cgcgagatcc
     1021 tgcacgtgct gccgcaggag ttcgtggtgg acgaccagga cgggatcggc gaccccaccg
     1081 gcatgaccgg cacccggctg gaggtgaacg tccacatcat cacctgctcg cagacggccg
     1141 cgcagaacac ggtcacctgc gtgaaccgcg ccgggctgga ggtgatcgac accgtcctca
     1201 cgcagctggc ggccgcggag gcgtgcctga cgcccgacga gaaggagctg ggggtggctc
     1261 tgctcgacat cggcggcggc accaccgacc tcgccatctt cgagaagggc tcgctctggc
     1321 acaccgcggt gctgcaggtg ggcggcgagc acttcacgaa cgacgtggcg gtggcgctgc
     1381 gcacgccggt gaacgaggcg gagaagatca agaagaagca cggctgcgcg ctcacctcga
     1441 tggtgcccga ggaggacgcg atcgaggtgc cgagcgtggg cggccgcaag ccccgcatca
     1501 tggccaggca ggtgctgggc gacgtgctgc aggcgcgcgc ggaagagatc tgccagatgg
     1561 ccttcaccga gatccgccgg tcgggcttcg accgcagcct caacagcggc gtggtgctga
     1621 cgggcggcgg cgccatcctg gaagggatgg ccgagatcgc cgagcagatc ttcgacatgc
     1681 cggtgcggcg gggaacccct tcgggcatcg gggggctcgt ggacgtggtg gccagcccgg
     1741 tctactcgac cgcggtgggg ctggtgttgc agggatatcg cagccgggcg gggcggggcc
     1801 tgtcctcgtc gcgtccggcg gccaccggca ccttcggcaa ggtgaccggc cggctcatgg
     1861 ggtggctgtc ggacttcttc tgacctggag gaaaccgatg gacgtgaagc gcgaaggcgc
     1921 cgtcttccca cctgtgccgc tgccgcggcc tcacgaggcc gaggtggtgg tccccggctc
     1981 gcgcgtgctg cgcgggcagt cggagctccg ctgcgagatg tgcggagcgg aggtggtggc
     2041 cgcgcactgc aagcgcatct gcctcaagtg cggattcatg accggatgct cggaagggct
     2101 ttgatttcgg aagggagctt cgcatgacca accataacga cgcgcccggg cgca
//
LOCUS       DASUYN010000523         3254 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1051477, whole genome shotgun sequence.
ACCESSION   DASUYN010000523 DASUYN010000000
VERSION     DASUYN010000523.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3254)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3254
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1051477"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(46..297)
                     /gene="rpsT"
                     /locus_tag="VF061_10150"
     CDS             complement(46..297)
                     /gene="rpsT"
                     /locus_tag="VF061_10150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HEX6669911.1"
                     /translation="MPRIESAKKRMRQARARTVHNRTQRSRLRSALKKVRTATGAEVE
                     TAYAEAVKLLDRAGRKQIIHPNAAARQKSRLAKLKAKGE"
     gene            497..1156
                     /locus_tag="VF061_10155"
     CDS             497..1156
                     /locus_tag="VF061_10155"
                     /inference="COORDINATES: protein motif:HMM:NF014244.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HEX6669912.1"
                     /translation="MLVFAMTAHEYAHAATALRQGDDTAYLLGRVTLNPVPHIDPWMS
                     LLLPALLWFGSSGAFTFGGAKPVPVNPRKYRKFVRGDLLVSAAGVATNFLLAFIFAFV
                     YVLLGMLAYAAPAASAVLETAQRMMIHGIWINLILCFFNLLPIPPLDGSHLLYHALPP
                     KAGSWYRGLQRFGYLPLFVLLFLFRPVVSVLLAPAAAMMNFLGGFIAPYRVMTPLAGL
                     Y"
     gene            1159..1905
                     /locus_tag="VF061_10160"
     CDS             1159..1905
                     /locus_tag="VF061_10160"
                     /inference="COORDINATES: protein motif:HMM:NF014654.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ScpA family protein"
                     /protein_id="HEX6669913.1"
                     /translation="MTLPEAPTTALGAGPGFVVELDAYSGPLDLLLHLLREEQLEIAD
                     IPIARIADQFLHAIHELGLNQAADYLDMASRLVRLKAQMLLPRHAEDDGWEDPRAELV
                     RRLLEYQQIREIAVWMGRAAERRADAFARGYLPPPPELPPPPLTLDLLELLQAVDRVI
                     AGIPTPVLHRVVARPLDVEGATLRIEELLDQREQFSWLEALGPSPSIVDVLSTLLALL
                     ELAKRGVVRLAQPSPFSPMVIARDTARPAA"
     gene            1880..2464
                     /gene="scpB"
                     /locus_tag="VF061_10165"
     CDS             1880..2464
                     /gene="scpB"
                     /locus_tag="VF061_10165"
                     /inference="COORDINATES: protein motif:HMM:TIGR00281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HEX6669914.1"
                     /translation="MTPLAQLLEAALFSAARPLTAEELSTLDADATMADVRVALEQIR
                     EHYDFEQHGVELLELAGGYQILTRPVHAAAIERAQFSVRASKLTAAALETLAVIAYRQ
                     PVGRAEIEEIRGVSAGGVLRSLQERGLIEVVGRSEALGRPLLYGTAPKLLELLGLKDL
                     SDLPRAEELTIALQPHRPVSDGGDDAAAYVEAES"
     gene            2470..3192
                     /locus_tag="VF061_10170"
     CDS             2470..3192
                     /locus_tag="VF061_10170"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HEX6669915.1"
                     /translation="MRLQRALARAGVASRRAAEELIEQGKVRVDGAVATLGMKVDPAR
                     QRITVSGRPVKQLARRWLAFHKPLGVVTTADDEEGRRTVFDFIPDAAGLTYVGRLDVN
                     TTGLLLLTTDGEAVHRLTHPRYHVPRRYTALVHGRPTAEIAEAARQRVMVEGRPVATS
                     EVRVRPGSEGRSILDVTLTEGRNRIVRRWAEAMGLRVDRLARLSYGPVRLGDLPPGRY
                     RPLTPKEEAALYKAVRLEPADG"
BASE COUNT          442 a         1199 c         1084 g          529 t
ORIGIN      
        1 cctctgctta ccgccttacc gtcctaccgc cttaccgcct accactcatt cccctttcgc
       61 tttcagcttc gccagccggc tcttctgccg ggcggccgcg ttgggatgga tgatctgctt
      121 gcggccggcc cgatccagga gcttgaccgc ctcggcgtag gccgtctcga cctcggcacc
      181 ggtcgcggtc cgcaccttct tgagcgcgct gcgaagacgg ctgcgctggg tgcggttatg
      241 cacggtgcgc gcgcgggcct gacgcatgcg cttcttggcg gattcgattc ggggcacggc
      301 gacctcgtct gaatggcggc ggcactccgg accagcccgg agcccaggaa ggggcgaaag
      361 ctagggcagg cctcacgcaa ggtcaagcgg cgacccgctt tgacttgatc cggccccgca
      421 cttaaccttc cgccgtcacc gccgaaaagg atccgatctg gacgcccagc tcagcgagtt
      481 catcctcgcg ctgcccatgc tcgtgttcgc catgacggcg cacgagtacg ctcacgccgc
      541 caccgccctc cgccaggggg acgacaccgc ctatctcctc gggcgcgtga cgctcaatcc
      601 cgtgccgcac atcgacccct ggatgagcct cctgctcccg gcgctgctct ggttcggcag
      661 cagcggcgcc ttcaccttcg gcggggccaa gccggttccg gtgaacccgc gcaagtaccg
      721 gaagttcgtt cggggggacc tgctcgtctc cgccgccggc gtggcgacca acttcctgct
      781 cgcgttcatc ttcgccttcg tctacgtgct gctcggcatg ctcgcttacg ccgcgccggc
      841 ggccagcgcc gtgctggaga cggcacagcg aatgatgatc cacggcatct ggatcaacct
      901 gatcctctgc ttcttcaatc tcctcccgat cccgcccctg gacggatcac acctcctcta
      961 ccacgcgctc ccgccgaagg ccggcagctg gtatcgcgga cttcagcgtt tcggctatct
     1021 tccactcttc gtgctcctct tcctgttccg gccggtcgtc agcgtgctcc ttgccccggc
     1081 ggcggcgatg atgaactttc tcggcgggtt catcgcaccg tatcgcgtga tgactccctt
     1141 ggcgggactc tactagccat gacccttccc gaagccccga ccaccgcact cggcgccggc
     1201 ccgggcttcg tggtcgagct cgacgcctac tccggcccgc tcgaccttct gctccacctg
     1261 ctccgcgagg agcagctcga gatcgccgac atcccgatcg cccgcattgc cgaccagttc
     1321 ctccacgcga tccatgagct cgggctcaac caggcggcgg actacctcga catggccagc
     1381 cgcctggtgc ggctcaaggc ccagatgctc ctcccccggc atgcggagga cgacggctgg
     1441 gaagatccgc gcgcggaact ggtgcgccgg ttgctcgagt accagcagat ccgcgagatc
     1501 gcggtctgga tgggccgcgc cgcggagcgc cgagcggacg cgttcgcccg cggctacctg
     1561 cctccgccgc cggagcttcc cccaccaccc ctgacgctcg acctgctcga gctgctccag
     1621 gcggtcgatc gggtgatcgc cgggattccg acgccggtgc tgcaccgggt ggtggcgcgc
     1681 ccgctggacg tcgagggtgc caccctgcgg atcgaggagc tgctggacca gcgggagcag
     1741 ttcagctggc tcgaggcgct cggccccagt ccctcgatcg tggacgtgct ttccaccctg
     1801 ctcgccctcc tggagctcgc caagcggggc gtcgtccgtc tggcccagcc ctccccgttt
     1861 tcgccgatgg tcatcgcccg tgacaccgct cgcccagctg cttgaagccg cgctcttcag
     1921 cgccgcacgg cccctcaccg cggaagagct gtccacgctc gacgccgacg ccaccatggc
     1981 cgacgtccgg gtcgcgctgg agcagatccg ggagcattac gacttcgagc agcacggggt
     2041 ggagctgctc gagctggccg gcggctacca gatcctcacc cgaccggttc atgcggcggc
     2101 gatcgagcgg gcgcagttct cggtccgggc ctcgaagctg accgccgcgg cgctcgagac
     2161 gctcgcggtg atcgcgtacc gccagcccgt cggccgggcc gagatagagg agattcgcgg
     2221 agtgtcggcc ggcggggtgc tgcgctcgct ccaggagcgc ggcctcatcg aggtggtggg
     2281 gcggagcgag gcgctgggcc ggccgctgtt gtacggcacg gcgcccaagc tcctcgagtt
     2341 gctcgggctc aaggacctct ccgacctgcc gcgcgccgag gagctcacca tcgcgctcca
     2401 accccaccgg cccgtgtccg acggcggcga cgacgccgcg gcctacgtcg aggcggaatc
     2461 gtgacggaga tgcggctcca gcgggcgctg gcccgcgccg gagtcgcttc acgccgggcc
     2521 gcggaggagc tgatcgagca ggggaaggtg agggtggacg gtgccgtcgc cacgctgggc
     2581 atgaaggtgg atcccgcgcg gcagcggatc acggtctcgg gccgtcccgt caagcagctc
     2641 gcacgccgct ggctcgcctt tcataagccg ctcggtgtgg tcaccaccgc cgacgacgag
     2701 gagggccgcc gcacggtctt cgatttcatt cccgacgccg cggggctcac ctacgtgggc
     2761 cggctcgacg tgaacacgac cgggctgctc ctgctcacca ccgacggcga agccgtccat
     2821 cgcctgaccc acccgcgtta ccacgttccc cgccgctaca ccgccctggt gcacggccgt
     2881 cccacggccg agatcgccga ggccgcgcgg cagcgggtga tggtcgaggg gcgaccggtc
     2941 gccaccagcg aggtgcgagt gcgcccgggc agcgaggggc gcagcatcct cgacgtgacg
     3001 ctgaccgagg gccgaaaccg gatcgtgcgc cgatgggcgg aagcgatggg gctgcgggtg
     3061 gaccgcctcg cgcggctctc ctacggcccg gtgcggctcg gcgatctgcc gcccgggcgc
     3121 tatcggccgc tcacgccgaa ggaagaggcg gcgctgtaca aggcggtgcg gctggagccg
     3181 gcggacggct gaaaccgagg gcaggggcgt ggcgtcgggt gctgggtatc tcgtcccgcg
     3241 cgcacgaccg gtcg
//
LOCUS       DASUYN010000524         3509 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_827540, whole genome shotgun sequence.
ACCESSION   DASUYN010000524 DASUYN010000000
VERSION     DASUYN010000524.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3509)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3509)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3509
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_827540"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..914
                     /locus_tag="VF061_10175"
     CDS             <1..914
                     /locus_tag="VF061_10175"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX6669916.1"
                     /translation="AFEAERPDIDVRWLDMGSQEILDRVRFERVNPQADVWFGGPTTT
                     FDLGVRDSLLQPYRPVWADRVGPNGVGPDRLYWPVYRTPAVIAYNNKIVRAEDAPHDW
                     DEVLAPRWRDKVVIRDPMASGTMRAIWGLILVRSVRETGDTGRGMEWLRRLDANTKTY
                     ALNPAILDAKLARAEGLVTLWDLPDILIGRSKGLPFGYTFPRSGTVVIDDAIALVRGS
                     RHPEAAQAFIDFVGGIEAQLLAAEHVFRLPARHDLPAGRVPAWVAEVEAEMVVAPMDW
                     GMLAQRGSAWMSYWDRHVRGGDRTASR"
     gene            911..1984
                     /locus_tag="VF061_10180"
     CDS             911..1984
                     /locus_tag="VF061_10180"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX6669917.1"
                     /translation="MTPFLAVEGLTKRFDRVVAAEDVTLSLARGEMLALLGPSGSGKT
                     TVLRLLAGFETPDAGRILVEGEDVTAVEPVHRRFGMVFQHYALFPHLDVGHNVGFGLE
                     SLGLRGEELAERIARALTLVDLAGLERRRVGQLSGGQQQRVALARALAPEPRVLLLDE
                     PLSNLDPTLRERTRREIRDLIRRVGITTMLVTHEQDEAFDLGDRVAVLRSGRLEQVGT
                     PDELYAAPANRFVGGFVGRSSVLPVSVLGPTEWGTRVAVEGVEWEIERPAGQPVLLPG
                     PALLLVRPEALRLGEDPQAIVGTVTSRRFTGPSSYFTILTASGTTLEVVAPPAAVRPG
                     ERVGILPSRRAAGGLHLFPADGA"
     gene            1981..>3509
                     /locus_tag="VF061_10185"
     CDS             1981..>3509
                     /locus_tag="VF061_10185"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEX6669918.1"
                     /translation="MRRGRASIGAGLLLALLLWLVLYPLVLVLVEGLRGPEGWTLEHV
                     REFLSRPTEMRALWGSLWISLASVALAALIGVPLALLLGRYDLPGGRVLGGLVALPAV
                     LPPLVGVVAFLFLYGETGFIPLLLMWLLRLEEPPWRLQGAGAILLVHAYSMYVYFYLL
                     VRAALVSLDAAQLEAAASLGAGRWRTFRTVVLPHLRPALAGASLLTFMTALGSFSAPY
                     VFGGGFRVMPTQIVATRLNGEDQLAMVETASLTAMALLALLLVRSDPRQPGGGGRKGS
                     GPARIAIRRPLARLVAGVTGWGLTALLLLPHFTLVLVSFVPVGTWTTEPLPPAYTLSN
                     YATLVDDPVRVRPLVNSTWLAAVATVAAVAIALGSALLGARRPTGPRRAIEALLALPW
                     AVPGTVFAIALATAFSAHEPLAGRFVLVGTLWILPLAYVVRNRPITSRAISAGVRALD
                     PSLDEAAASLGAGRLRTLRRVTVPLLRPALLAGASLAFVTAFGDFVTSIMLYTYDTRP
                     IS"
BASE COUNT          400 a         1249 c         1313 g          547 t
ORIGIN      
        1 acgccttcga ggccgagcgg ccggatatcg acgtgcgctg gctggacatg ggatcccagg
       61 agatcctcga ccgggtgcgg ttcgagcggg tgaacccgca ggccgatgtc tggttcggcg
      121 gcccgaccac gaccttcgac ctcggggtgc gggactccct gctccaaccg taccgcccgg
      181 tctgggccga ccgggtcggc cccaacggcg tgggtcccga ccggctctac tggccggtct
      241 accgcacccc ggccgtcatc gcctacaaca acaagatcgt ccgcgccgag gacgcgccgc
      301 acgactggga cgaggtgctg gccccgcgct ggcgcgacaa ggtcgtgatt cgcgatccga
      361 tggcgagcgg cacgatgcgg gccatctggg ggctcatcct ggtccgcagc gtccgggaga
      421 ccggggacac ggggcggggg atggagtggc ttcggcgcct cgacgccaac accaagacct
      481 acgcgctcaa cccggcgatt ctcgacgcca agctggcccg tgccgaaggg ctggtgaccc
      541 tctgggatct gcccgacatc ctgatcggac ggtcgaaggg gctcccgttc ggttacacct
      601 ttccccggag cggcaccgtg gtcatcgacg atgcgatcgc gctggtgcgc ggcagccgcc
      661 acccggaagc ggcgcaggcg ttcatcgact tcgtcggcgg gatcgaggcc cagctcctcg
      721 ccgcggagca cgtgttccgg ctcccggcac ggcacgatct gccggcgggc cgggtgcccg
      781 cgtgggtggc ggaagtggag gcggagatgg tcgtcgcccc gatggactgg gggatgctgg
      841 cgcagcgggg cagcgcctgg atgagctact gggatcggca cgtgcggggc ggcgaccgca
      901 cggcctcgcg atgaccccgt tcctcgcggt cgaaggcctc accaagcgat tcgaccgcgt
      961 ggtcgcggcg gaggacgtca cgctctccct ggcccgcggg gagatgctcg cgctgctggg
     1021 gccgagcggc agcggcaaga ccacggtgct ccgcctcctc gccggcttcg agacccccga
     1081 cgccggccgc atcctggtcg aaggcgaaga cgtgaccgcg gtggagccgg tgcaccgccg
     1141 gttcggcatg gtcttccagc actacgcgct gtttccccac ctcgatgtgg gccacaacgt
     1201 cggattcggg ctcgagtccc tgggcctgcg cggcgaggag ctggcggaac ggatcgctcg
     1261 ggcgctgacg ctggtggacc tcgccgggct ggagcgccgc cgggtcggcc agctctcggg
     1321 tgggcagcag cagcgagtcg cgctcgcgcg cgcgctggcc ccggagccgc gggtcctgct
     1381 gctggacgaa ccgctgtcca acctcgatcc gaccctgcgc gagcgcaccc gccgggagat
     1441 ccgggacctg atccggcgcg tcggcatcac caccatgctc gtcacccacg agcaggacga
     1501 ggccttcgat ctgggcgacc gggtggcggt gctgcggagc ggccgactgg aacaggtggg
     1561 cacgccggac gagctctacg ccgcgcccgc caaccggttc gtcggcggct tcgtggggcg
     1621 gtcgagcgtg ctcccggtct cggtgctcgg gcccaccgag tggggaaccc gggtcgccgt
     1681 cgagggcgtc gagtgggaga tcgagcggcc ggcaggccag ccggtcctgc tcccgggccc
     1741 cgcgctgctg ctggtgcggc ccgaggcgct gcgccttggc gaggatcccc aggcgatcgt
     1801 gggcacggtg acgtcgcggc ggttcaccgg gccgtcctcg tacttcacca tcctgacagc
     1861 gagcggtacc acgctggagg tggtggcacc cccggcggcg gtccggccgg gcgagcgggt
     1921 ggggatcctg cccagtcggc gcgcggccgg cgggctccac ctgtttcccg cggacggcgc
     1981 gtgagacgcg gccgcgcgtc gatcggcgcg gggctgcttc tcgcgctcct gctctggctg
     2041 gtgctctacc cgctggtgct ggtgctggtc gaggggctcc gcgggcccga ggggtggacc
     2101 ctcgagcacg tgcgcgagtt cctgagccgg cccaccgaga tgcgcgcgct gtggggcagc
     2161 ctgtggatct cgctcgcgag tgtggcgttg gcggcgctga tcggggttcc gctcgcgctg
     2221 ctcctcggcc gctacgatct gcccggcggg cgggtgctcg gcgggctggt ggcgcttccc
     2281 gcggtgctgc cgccgctggt gggcgtggtc gctttcctct tcctctacgg tgagaccggg
     2341 ttcatcccgc tgctgctcat gtggctgctc cggctggagg agccgccgtg gcggctccag
     2401 ggagccggcg ccatcctgct ggtccacgcc tattcgatgt acgtctactt ctacctcctg
     2461 gtgcgcgcgg cgctggtgtc gctcgatgcc gcgcagctgg aggcggccgc cagcctcggc
     2521 gcgggccggt ggcgcacctt caggacggtg gtgctgccgc acctcaggcc cgccctggcc
     2581 ggggcttccc tgctcacctt catgaccgcg ctggggtcgt tcagcgctcc ctacgtgttc
     2641 gggggcgggt tccgggtcat gccgacgcag atcgtcgcca cccggttgaa cggcgaggac
     2701 cagctcgcga tggtggagac cgcttcgctg accgcgatgg cgctgctggc cctgttgctg
     2761 gtccgcagcg acccgcgcca gccgggcggc ggcggccgga aagggtcggg gccggcgcgg
     2821 atcgcgatcc gccgtccgct cgcgcggctg gtcgcggggg tcacggggtg ggggctgacc
     2881 gcgctgctgc tgctgccgca cttcaccctg gtgctggtct ccttcgttcc cgtgggcacc
     2941 tggacgaccg agccgctgcc gccggcgtac accctcagca actacgcgac gctggtggac
     3001 gatccggtcc gggtgcggcc gctggtcaac agcacctggc tggcggcggt tgcgaccgtc
     3061 gccgcggtgg cgatcgcgct ggggagcgcg ctcctcggcg cgcggcgccc gacgggaccg
     3121 cgccgcgcca tcgaggcgct cctcgcgctg ccgtgggcgg tgccgggcac cgtgttcgcg
     3181 atcgcactgg ccaccgcctt cagcgcgcac gagccgctgg caggacggtt cgtgttggtg
     3241 gggacgctct ggatcctgcc gctcgcctac gtggtccgga accggcccat caccagccgc
     3301 gccatctcgg ccggcgtgcg agcactcgac ccctcgctgg acgaagccgc ggcgagcctc
     3361 ggcgcgggac gcctgcggac cctccgccgg gtcacggtgc cgctcctgcg accggcgctc
     3421 ctcgccggcg ccagcctggc cttcgtcacc gcgttcgggg acttcgtgac ctcgatcatg
     3481 ctctatacct acgacacccg gccgatctc
//
LOCUS       DASUYN010000525         4781 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_827858, whole genome shotgun sequence.
ACCESSION   DASUYN010000525 DASUYN010000000
VERSION     DASUYN010000525.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4781)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4781)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4781
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_827858"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            110..1675
                     /locus_tag="VF061_10190"
     CDS             110..1675
                     /locus_tag="VF061_10190"
                     /inference="COORDINATES: protein motif:HMM:NF020249.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX6669919.1"
                     /translation="MPRPKSILWVDDEVESLTSHILFLEEQGFAVETTAHGDDALVLL
                     QRQPYGVVLLDEQMPGRRGLDLFREIRSIDHGMPVVMVTKSEETETLKDAIGADVSDY
                     LIKPVNPRQILSVVTRLLDGDRIRQQRLSRDFATRFRDLEARRGSPLSWREWVELVAE
                     LAEWEVRLGQADEPGLQDALRTLQDSLRQDFARYLQRNYAGWLHDGDSDRPPLSVDIG
                     AEFLKPVLDMHGKALLVVVDCLRLDQWAMIRPLITARFDIETAYYFSILPTATPFARN
                     AIFSGLFPAEIKARYPRWWTDNEEASLNAHEAELLTEQLKELTGRQVPVHYEKVFTAA
                     DGEGLLRRLPAHLAQDGVTALVFNFIDQLTHGRTENSTLYEVARDTPALRNLTRTWFE
                     RSPLWDALREAERRGVPVLLTTDHGSIHCHTPATVYAKRDTTSNLRYKFGEDLRAQDA
                     DAALVVDDLPAYGLPARTPATRLLLATGDRFFVYPTKLREYQARYRGAFLHGGVSPEE
                     VILPIALLTPRHA"
     gene            1678..3516
                     /locus_tag="VF061_10195"
     CDS             1678..3516
                     /locus_tag="VF061_10195"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX6669920.1"
                     /translation="MRTERRLLRLVRPYWGLLAAGLVVTFLASVLDGFVLVVLIPLLK
                     NLFGTAGELRTGSTQLEALVERMVQPLVAGLSPAGAAGRLVVVLVVGLLLKNALSYLS
                     SQITVRAQEGLVRDLRARLFDHLLTLELGFFQRTRAGQVISAMMADVDQTKTVITASL
                     VSLFQNLVVVAVTLVVLSQISMRLTLFTLAFVPVLVMLLQRLVRRLRRHARARSKERG
                     EVTATVAERIGAIRLIRSYGEEGRESAAFRAQTDRYRKQVIRTQRFSSLTSPVTEVFS
                     GFLVILIIWAATSPELLGLQAPLAPATIIVFLMAALRLTSPLKTISGFPAVMALALAS
                     AERIFQVLDEPPTEVDRPGEGEASFARDIVFDRVGFRYGDGEPVLSEVSLVVPKGRVV
                     ALVGPSGAGKTTLADLLPRFHDPTEGRILLDGVPLTRLTRRSLRALMGVVSQDTVLLN
                     NTVFANIAYGSPGATRERVEAAADAANAAGFIRQLPQGLDTVLGERGTRLSGGQRQRI
                     AIARALLRDPPILILDEATSALDTESERLVQQAIDRLMQDRTVLVIAHRLATVRDADE
                     IVVLDEGRIVQRGTHEELYRGAGLYRRLHDLQFRDDDVLEVAHRRL"
     gene            3612..4607
                     /locus_tag="VF061_10200"
     CDS             3612..4607
                     /locus_tag="VF061_10200"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024914.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX6669921.1"
                     /translation="MLLVGAFDDAMHAHTALRRRALERLGCSVTSFNLVSQGGLLNRL
                     RRIGLRDRLASALRQTDPALVLVLEGSQLPPELVAELKRESGALWVNWFCDERRSRDA
                     VTTLAAAYDLVFVAGSEVLESGETIGLPPLRYLPPGCDPSVHRPMRSRDQFRANVVFA
                     GTATAHRERMLSELVEFGLAVWGPGWRRTRLRDYCRGELLDHGDYIRAYAGASVAVNV
                     QCSDAADGTDPGCNRRLFELAAIGVPQVVEDRPDIHRHFREGSEILVARSPADFKGLL
                     AEALQDRAWSEQVAAGARQRALSEHTYMHRLAALLGALRIVEPQFALRPEELSLR"
     gene            complement(4578..>4781)
                     /locus_tag="VF061_10205"
     CDS             complement(4578..>4781)
                     /locus_tag="VF061_10205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669922.1"
                     /translation="SAEVGALGDTLEELVELRPRLDTVEPEACRAHVERHFTHHVMAE
                     GYLRMFRAYLATGALPEGKLLGP"
BASE COUNT          658 a         1769 c         1611 g          743 t
ORIGIN      
        1 gccttaccgc cttaccgcct taccgcctta ccgccttacc gccttaccgc cttaccgcct
       61 taccgcctta ccgccttacc gccttacgcc ttccggctat cttttcccaa tgccccgtcc
      121 caagagcatt ctctgggtgg acgacgaggt ggagagcctc acgtcccata tcctcttcct
      181 ggaggagcaa ggcttcgccg tggagaccac cgcgcacggc gacgacgccc tcgtgctgct
      241 ccagcgccag ccctacggcg tggtcctgct ggacgagcag atgcccggcc gccgggggct
      301 cgacctcttc cgggagatcc gcagcatcga tcacgggatg ccggtcgtga tggtcaccaa
      361 gagcgaggag accgagacgc tcaaggacgc catcggcgcc gacgtctccg actacctcat
      421 caagccggtg aacccgcggc agatcctgtc ggtcgtgacc cggctgctgg acggcgaccg
      481 catccggcag cagcgcctct cgcgcgactt cgccacccgg ttccgcgacc tcgaggcccg
      541 gcgcggaagc cccctgagct ggcgcgagtg ggtggagctg gtggccgagc tggccgagtg
      601 ggaggtgcgg ctggggcagg cggacgagcc cggcctgcag gatgcgctgc ggacgctcca
      661 ggacagcctg cggcaggact tcgcccggta cctccagcgc aactacgcgg gctggctgca
      721 cgacggcgac agcgaccgtc cgcccctctc ggtggacatc ggcgccgaat tcctgaagcc
      781 ggtgctggac atgcacggga aggcgctgct ggtggtggtg gactgcctgc ggctggacca
      841 gtgggccatg atccgcccgc tcatcacggc ccgtttcgac atcgagaccg cgtactactt
      901 ctccatcctg ccgacggcca cgccgttcgc gcgcaacgcg atcttcagcg ggctgttccc
      961 ggcggagatc aaggcccgct acccccggtg gtggaccgac aacgaggagg ccagcctcaa
     1021 cgcccacgag gccgagctgc tgaccgagca gctcaaggag ctcaccgggc ggcaggtgcc
     1081 ggtgcattac gagaaggtgt tcaccgcggc cgacggcgag ggcctgctgc gccggctccc
     1141 ggcccacctg gcgcaggacg gagtcacggc gctggtgttc aacttcatcg accagctcac
     1201 ccacgggcgc acggagaact cgacgctcta cgaggtcgcc agggacacgc cggcgctccg
     1261 gaacctcacc cgcacctggt tcgagcgctc cccgctgtgg gatgcgctgc gggaggcgga
     1321 gcgccgcggg gtccccgtcc tgctcaccac cgaccacggc tcgatccact gccacacgcc
     1381 ggccaccgtc tatgccaagc gggacaccac ctcgaacctg cgctacaagt tcggggagga
     1441 cctgcgggcg caggacgcgg atgccgcgct ggtggtggac gacctgcccg cgtacggcct
     1501 gccggcccgc accccggcca cccgactcct cctggcgacc ggcgaccgct tcttcgtgta
     1561 tcccaccaag ctgcgggagt accaggcccg ctaccgcggc gccttccttc acggcggcgt
     1621 ctcgcccgag gaagtcatcc tccccatcgc cctgctcacc ccgcgccacg cctgacggtg
     1681 cggaccgagc gtcggctgct gcggctggtg cgcccctact gggggctcct cgccgccggg
     1741 ctcgtcgtca ccttcctcgc ctcggtgctc gacggattcg tgctggtcgt gctgatcccg
     1801 cttctcaaga acctgttcgg caccgcggga gagctgcgca ccggctcgac ccagctcgag
     1861 gcgctggtgg agcggatggt ccagccgctg gtggccggcc tctcgcccgc gggggcggcc
     1921 ggccggctgg tcgtggtcct cgtggtgggg ctgctgctca agaacgccct ctcctatctc
     1981 tcgagtcaga tcaccgtccg cgcccaggag ggcctggtgc gcgacctccg cgcgcggctg
     2041 ttcgaccatc tcctcaccct ggagctgggc ttcttccagc gcacccgggc gggacaggtg
     2101 atctccgcca tgatggcgga cgtggaccag accaagaccg taatcaccgc ctcgctggtc
     2161 tcgctgttcc agaacctggt cgtagtggcg gtcacgctgg tggtgctgag ccagatctcg
     2221 atgcgcctca ccctcttcac tctcgccttc gtgccggtcc tggtcatgct gctccagcgg
     2281 ctggtgcgcc ggctccggcg gcacgcgcgg gcccgcagca aggagcgggg cgaggtgacc
     2341 gccaccgtcg ccgagcggat cggcgcgatc cggctgatcc gctcctatgg agaggagggg
     2401 cgggagtcgg ccgcgttccg ggcccagacc gaccgctacc ggaagcaggt gatccgcacc
     2461 cagcggttct cctccctcac cagcccggtg acggaggtct tctccggctt cctcgtcatc
     2521 ctgatcatct gggccgccac cagcccggag ctgctggggc tccaggcgcc cctggcgccg
     2581 gccaccatca tcgtgttcct catggcggcg ctccggctca cctcaccact caagaccatc
     2641 tccggcttcc cggcggtcat ggcgctcgcg ctggcgagcg cggagcggat cttccaggtg
     2701 ctggacgagc ccccgaccga ggtggaccgg cccggcgaag gcgaggcgag cttcgcgcgg
     2761 gacatcgtct tcgaccgggt gggcttccgc tacggcgacg gggagccggt gctgagcgag
     2821 gtctccctcg tcgttcccaa gggcagggtc gtggccctgg tcggtccctc cggagcgggg
     2881 aagaccaccc tggccgacct gctcccccgg ttccacgatc cgaccgaggg ccggatcctg
     2941 ctcgacggcg tgccgctcac ccggctcacg cgccgctccc tgcgcgcgct gatgggcgtg
     3001 gtgagccagg ataccgtgct gctcaacaac accgtgttcg ccaacatcgc ctacggctct
     3061 cccggggcca cccgggagcg ggtggaagcc gcggccgacg cggcgaacgc cgccgggttc
     3121 atccgccagc tcccccaggg gctcgacacc gtgctcgggg agcgcggaac ccggctgagc
     3181 gggggacagc ggcagcggat cgccatcgcg cgtgccctct tgcgcgaccc gcccatcctg
     3241 attctcgacg aggccaccag cgcgctcgac accgagtcgg agcgcctggt gcagcaggcc
     3301 atcgaccggc tgatgcagga ccgcaccgtg ctggtgatcg cgcaccggct ggccaccgtc
     3361 cgcgatgcgg acgagatcgt ggtgctggac gagggccgca tcgtgcagcg aggcacccat
     3421 gaggagctgt accgcggcgc cgggctctat cgccggctcc acgacctgca gttccgcgac
     3481 gacgacgtgc tggaggtcgc gcaccggagg ttgtgatcca cgggccgctc gctagtttcc
     3541 gtctttcccc acggtgagcg ccgatgcccc cttccgttcg aaccgctttg gaccacttgg
     3601 agaacacccg cgtgctgctg gtcggcgcgt tcgacgacgc gatgcacgcc cacaccgcgc
     3661 tccgacggcg ggccctcgag cgactcggct gcagcgtcac ctccttcaac ctggtgagtc
     3721 agggcgggct gctgaaccgg ctccgccgga tcggacttcg cgatcgcctg gccagcgccc
     3781 tgcgccagac cgatccggcc ctggtgctgg tgctcgaggg aagccagctg ccgcccgagc
     3841 tggtggcgga gctgaagcgc gagagcggcg ctctctgggt caactggttc tgcgacgagc
     3901 ggcggagccg ggacgccgtc accacgctcg ccgcggcgta cgatctcgtc ttcgtggccg
     3961 gcagcgaggt gctggaaagc ggcgagacca tcggcctccc gcccctgcgc tacctcccgc
     4021 ccggctgcga tccctccgtg caccggccga tgcgctcccg cgaccagttt cgtgccaacg
     4081 tcgtcttcgc gggcaccgcg acggcccacc gcgagcggat gctctccgag ctggtggagt
     4141 tcggcctcgc cgtgtggggg cccggctggc gcaggacccg gttgcgggac tactgccgcg
     4201 gcgagctgct ggaccacggt gactacatcc gcgcctacgc cggcgcctcg gtggcggtga
     4261 atgtgcagtg ttcggacgcg gccgacggca ccgatccggg ctgcaaccgg cgtctcttcg
     4321 agctggccgc gatcggggtg ccgcaggtgg tggaggaccg tcccgacatc caccggcact
     4381 tccgcgaggg ctcggagatc ctggtcgccc gctccccggc ggacttcaag gggctgctgg
     4441 ccgaggcgtt gcaggaccgg gcgtggtcgg aacaggtcgc cgccggcgcc cggcagcggg
     4501 cgctgagcga gcatacgtac atgcaccggc tggcggcgct gctgggcgcg ttgaggatcg
     4561 tcgagccgca gttcgcctta aggcccgagg agctttccct ccggtaacgc ccccgtcgcc
     4621 agataggccc ggaacatccg caggtacccc tccgccatca cgtggtgtgt gaagtgccgc
     4681 tccacgtggg cccgacacgc ctcgggctcg accgtgtcca ggcgcggccg cagctccacc
     4741 agctcctcca gcgtgtcccc gagcgccccc acctcggccg a
//
LOCUS       DASUYN010000526         5880 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_391364, whole genome shotgun sequence.
ACCESSION   DASUYN010000526 DASUYN010000000
VERSION     DASUYN010000526.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5880)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5880)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5880
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_391364"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..299)
                     /locus_tag="VF061_10210"
     CDS             complement(<1..299)
                     /locus_tag="VF061_10210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669923.1"
                     /translation="MDRAIAEYYRRTAEETRLDQGPFRLEWERTRELLGRFLPPPPAT
                     VVDVGGAAGAYALWLAEAGYQVHLLDPIPRLVAEARRRSALARRPLLSCRIGDARA"
     gene            complement(334..837)
                     /locus_tag="VF061_10215"
     CDS             complement(334..837)
                     /locus_tag="VF061_10215"
                     /inference="COORDINATES: protein motif:HMM:NF016840.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEX6669924.1"
                     /translation="MEPQVAPLHAILELNTDLLLNCLDGLSDEEARRQLAGGGNTVAF
                     LAAHLTDTRHFLAQRLGRPLANPLSRYLAEASSIDDIVEWPSLAEQREWWVDVSRHVG
                     TVVAARTADELRRQNVHRFPMEDSTELGLIAFLVQHDSYHIGQLGFLRRQFGKPAMAY
                     TRGVRAG"
     gene            complement(886..1269)
                     /locus_tag="VF061_10220"
     CDS             complement(886..1269)
                     /locus_tag="VF061_10220"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX6669925.1"
                     /translation="MSQPEERLRPHPSTRLAGPVVPLQLTDLARALFAEPHPAKSGHR
                     QASLIHRGPLRLLLFAFEPGGHLPEHRAPGHVVIHCLRGELSVAAGGEEHRLAEGDAV
                     VLDPEVPHSVAAIAESEMLLTVCIG"
     gene            complement(1350..1571)
                     /locus_tag="VF061_10225"
     CDS             complement(1350..1571)
                     /locus_tag="VF061_10225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3565 domain-containing protein"
                     /protein_id="HEX6669926.1"
                     /translation="MNAANDAVPRRIVGFHQDDERHWVADLECGHAQHVRHDPPWQVR
                     PWVTTPEGRSSRVGTTLNCRRCLDRRPVS"
     gene            complement(1568..1873)
                     /locus_tag="VF061_10230"
     CDS             complement(1568..1873)
                     /locus_tag="VF061_10230"
                     /inference="COORDINATES: protein motif:HMM:NF017897.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF962 domain-containing protein"
                     /protein_id="HEX6669927.1"
                     /translation="MSAEYRSFREFYPAYLAEHKERATRRLHFVGTLLVIVVLGVAVW
                     TGNLRWLLAAPLVGYGLAWIGHFVFERNRPATFRHPLYSLAGDFVMFKDILIGRLPW"
     gene            complement(1893..2423)
                     /locus_tag="VF061_10235"
     CDS             complement(1893..2423)
                     /locus_tag="VF061_10235"
                     /inference="COORDINATES: protein motif:HMM:NF037785.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669928.1"
                     /translation="MSRLRRPVIGVMGGSEAPTATLEAARRLGRLAAEAGWVVLTGGR
                     PAGVMEAACAGAKTVPGSLTVGILPSGHGGPVSEEVDVAVFTGIGEARNAINVLSSDV
                     VVACGVASTGTASEVALALRLDRPTVLLAPSAEAAAFFRAIGQPELLHEAETPEGAID
                     LIERRLGIPRRPADAG"
     gene            complement(2420..2773)
                     /locus_tag="VF061_10240"
     CDS             complement(2420..2773)
                     /locus_tag="VF061_10240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669929.1"
                     /translation="MSARHPSPAVLATDGTLWVAYRIARDSSHCAVIRFHRVQQYVWG
                     PSPAAHLEEDPGAVPRGSFYEVPVETGGPGGRGRRWIITFPDALLDVRAADGEVVLRA
                     TAALGPSHAIAALLA"
     gene            2885..3190
                     /locus_tag="VF061_10245"
     CDS             2885..3190
                     /locus_tag="VF061_10245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669930.1"
                     /translation="MDLGDITQLTLVATTALVIGRVGWSLARLIDRRALRSPALADEA
                     AERIGLLEQEQLALRQELAELQERQDFTERALVREPQRPVPGEPRALPGATHGISTR"
     gene            complement(3169..3909)
                     /locus_tag="VF061_10250"
     CDS             complement(3169..3909)
                     /locus_tag="VF061_10250"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX6669931.1"
                     /translation="MTASRSQGMELLDRLLDIERKLWTNDASLYRDTLLHDAILIFPE
                     TDVITTDAAVEAIRQENAEGRRWAEVRFQQARSVPLSDDAVLLTYRVAARWEHQQAPI
                     TARASSVYVRRGDRWKLAHHQQTALQSTGSENKRTIERYMEAFRRGDHAAILGCLTDD
                     VEWEIPGAVHLRGQAAFDKEIENEAFVGRPEIGVTRLTEENDVVIAEGSVRTRRRTGA
                     MLDLRFCDVFEMAGGRIRRLISYLVEIP"
     gene            complement(3996..4199)
                     /locus_tag="VF061_10255"
     CDS             complement(3996..4199)
                     /locus_tag="VF061_10255"
                     /inference="COORDINATES: protein motif:HMM:NF018961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dodecin family protein"
                     /protein_id="HEX6669932.1"
                     /translation="MAVAKITEIQSASTKSFEDAITAGIARADKTLRNLTGAWIKSQQ
                     VVIEKGKITEYRVLMKVTFILKD"
     gene            complement(4343..4570)
                     /locus_tag="VF061_10260"
     CDS             complement(4343..4570)
                     /locus_tag="VF061_10260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669933.1"
                     /translation="MTDDRIIRLLEEIRDLQRLHTERYGEALQNQQESIRLQQAGLRR
                     IRVVLAFATVALVLAVTMLVLLLLRIAARLG"
     gene            complement(4589..5110)
                     /locus_tag="VF061_10265"
     CDS             complement(4589..5110)
                     /locus_tag="VF061_10265"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX6669934.1"
                     /translation="MILRFRDATPGDVPAIAALQNAASGALTARFGAGPWSTLVTERE
                     AAFARRHARVRVGREGKRILTVVRLAARKPWAIDVSYFTPVKRPLYLTGMAVSVAHQG
                     RGLGTRALEDACRVAVDWPADALRLDAFDAEAGAGGFYARGGFTERGRVVYKGDPLIY
                     YERLLDGLGETPA"
     gene            5174..5665
                     /locus_tag="VF061_10270"
     CDS             5174..5665
                     /locus_tag="VF061_10270"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SgcJ/EcaC family oxidoreductase"
                     /protein_id="HEX6669935.1"
                     /translation="MSRPARSTASLALATALLLSACSGTRRAGLTAADSTALRALDQA
                     YVEAWLADDTAAVLATLAPDAVLMPPGAPPLATADAIQAFWWPQDGSRTRITHYTTTI
                     DEIAGTPDLAYMRGTGRLTFVYRKDTLRLEQTSRNTTLTLLARGADGRWLIHRRMWGP
                     AAP"
BASE COUNT          886 a         2123 c         2005 g          866 t
ORIGIN      
        1 gcacgcgcgt ccccgatacg gcaggagagg agggggcgcc gcgccagcgc gcttcgccgg
       61 cgcgcctccg cgaccagccg ggggatcgga tccagcaggt ggacctggta acccgcctcg
      121 gcgagccaca gcgcgtaggc accggccgcg ccgcccacgt ccaccaccgt cgcgggcggt
      181 gggggcagga atcgccccag cagctcccgg gttcgctccc actccaagcg gaaagggccc
      241 tggtcgagcc gcgtctcctc ggcggtgcgc cggtagtact cggcgatcgc gcgatccatg
      301 ggaggggacg gggggtcccg gggcaccgcg cgctcaaccc gcccgtacgc cgcgggtgta
      361 ggccatcgcg ggcttgccaa actgtcgccg caggaatcca agctggccga tatggtagga
      421 atcgtgctgc accaggaagg cgatcaggcc gagctcggtc gagtcctcca tcgggaatcg
      481 gtgcacgttc tgccggcgga gctcgtcggc cgtcctggcg gccaccacgg tgcccacatg
      541 gcggctcacg tccacccacc actcccgctg ctccgccagt gacggccatt ccacgatgtc
      601 gtcgatgctg ctggcctcgg cgaggtaccg cgagagcggg ttggcgaggg ggcgacccag
      661 gcgctgggcc aggaagtgcc gcgtgtcggt caggtgcgcg gccaggaagg ccacggtatt
      721 gccgccgccc gcgagctgcc ggcgcgcctc ctcatccgac agaccgtcga ggcagttgag
      781 caggagatcc gtgttcagct cgagaatcgc gtgcaggggc gcgacctgcg gctccatttc
      841 gaccctccgg aggacgtcgt gctcgtcatg cgggcacagg gtagctcagc cgatgcacac
      901 ggtcagcagc atctcgctct cggcgatggc cgccaccgaa tgggggacct ccggatcgag
      961 cacgacggcg tcgccctcgg ccaacctgtg ctcctctccg ccggccgcga ccgacagctc
     1021 cccgcgaaga caatgaatca cgacgtggcc cggggcgcgg tgctccggaa ggtggccacc
     1081 cggctcgaag gcgaagagca gcaggcgcag ggggccgcga tggatcaggc tcgcctgccg
     1141 gtgtccgctc ttcgccgggt gcggctcggc gaagagggca cgcgcgaggt cggtgagctg
     1201 caggggcacg acgggtccgg cgaggcgggt actggggtgc ggccggagcc gctcttcggg
     1261 ctggctcatg gtcggcggtg tcctcggctc agcttcgaca agcgtacctc caggtcggcg
     1321 gtcaacatgg tggcctcgcg cctacccgct caagaaaccg gccgccggtc gaggcagcgc
     1381 cggcagttca gcgtggtgcc cacgcggctc gagcggccct cgggcgtcgt gacccagggc
     1441 cggacctgcc acggcgggtc gtggcgcacg tgctgtgcat ggccgcactc caggtccgcc
     1501 acccagtggc gctcgtcgtc ctgatggaag ccgacgatgc ggcggggcac ggcgtcattc
     1561 gccgcgttca ccacggcagc ctgccgatca ggatgtcctt gaacatcacg aagtcgccgg
     1621 ccaggctgta gagcggatgg cggaacgtcg cgggccggtt ccgctcgaag acgaagtggc
     1681 cgatccaggc gagcccgtac ccgacgaggg gggcagccag cagccagcgc aggttcccgg
     1741 tccacaccgc gacgccgagc accacgatga cgagcaacgt gcccacgaaa tgcagccggc
     1801 gcgtcgctcg ctccttgtgc tccgcaaggt aggcgggata gaactcgcga aaactccggt
     1861 actcggcgct catggctcct cctgcgtggg cgtcacccgg catccgccgg ccggcgcggg
     1921 atgccgagcc gacgctcgat caggtcgatc gctccctcgg gcgtctcggc ctcgtgcaac
     1981 agttcgggct gcccgatcgc gcggaagaag gcggccgctt ccgcggacgg agccagcagg
     2041 acggtgggcc ggtcgagccg gagcgccagc gcgacctccg acgccgtgcc cgtactcgcc
     2101 acaccacagg cgaccaccac atcgctgctg aggacgttga tcgcgttgcg cgcctcaccg
     2161 atgccggtga acacggcgac atccacctcc tcgctcaccg ggcccccgtg gccgctgggg
     2221 agaatgccga cggtgagact gcccggcacc gttttcgcgc ccgcacacgc cgcctccatc
     2281 acgcccgcgg gccggccgcc tgtgagtacc acccagccgg cctccgcggc gagacgcccg
     2341 agacgacggg cggcctccaa cgtcgcggtc ggcgcctcgc ttccgcccat caccccgatg
     2401 accggtcggc gcaggcggct cacgcgagga gcgcggcgat cgcgtgggag ggccccagtg
     2461 ccgccgtggc ccggaggacc acctcgccat cggccgcccg cacgtcgagc agcgcgtccg
     2521 ggaaggtgat gatccagcgg cggcccctcc caccgggacc gccggtttcg accggaacct
     2581 cgtagaagct cccgcgcggc acggcaccgg gatcctcctc gaggtgggcc gccggtgagg
     2641 gaccccagac gtactgctgg acgcggtgga agcgaatcac ggcgcagtga ctggagtctc
     2701 gcgcaatccg gtaggccacc cagagcgtgc catcggtcgc cagcacggcg ggcgacggat
     2761 gtctcgcgct catcggcggc ggctcggtcc attcctgcag gacgcgcgga ttgcccgggc
     2821 ccggccctga ccccatcatt ggtactcccg attggacgta cgctccccgg ctgctggagc
     2881 ttctatggac ctgggtgaca tcacccaatt gaccctggtc gcgaccacgg cgctcgtgat
     2941 cgggcgcgtc ggctggtcgc tcgcccggct catcgatcgc cgggcccttc gcagcccggc
     3001 gctcgccgac gaggcggcgg agcggatcgg gctcctggag caggagcagc tcgccctgcg
     3061 gcaggagctg gccgagctgc aggagcggca ggacttcacg gagcgcgccc tggtgcgcga
     3121 gccccagcgg ccggtgcccg gcgagccccg tgccctgccc ggcgcgactc acgggatctc
     3181 cacgaggtag gagatcaggc gccggatccg gccgcccgcc atctcgaaga cgtcgcagaa
     3241 cctgagatca agcatggccc cggtccgccg ccgggtccgt accgagccct cggcgatgac
     3301 cacgtcgttc tcctcggtca ggcgggtgac gccgatctcg ggacgaccca cgaaggcctc
     3361 gttctcgatc tccttgtcga acgcagcttg tcctctcaag tgcaccgcgc ccggaatctc
     3421 ccactcgacg tcgtcggtga ggcagccgag gatcgccgcg tgatctcctc tccggaacgc
     3481 ttccatgtag cgctcgatcg tgcgcttgtt ttccgacccg gtcgactgga gcgcggtctg
     3541 ctgatggtga gcgagcttcc agcggtcgcc gcggcggacg tagacgctgc tggctcgggc
     3601 ggtgatgggg gcctgctggt gctcccaccg ggcggccaca cggtaggtga gcagcacggc
     3661 gtcgtccgag agcgggacgc tccgcgcctg ctggaaccgg acctcggccc agcgtcgccc
     3721 ctcggcgttc tcctgccgga tcgcctcgac cgcggcgtcc gtggtgatga cgtccgtctc
     3781 cggaaagatc agaatggcgt cgtgcagcag cgtatcgcga tagagcgagg cgtcgttggt
     3841 ccacagcttc cgctcgatgt cgagcagccg gtcgagcagc tccattccct ggctcctgct
     3901 ggcggtcatc gtgccgtgcg agggcaccgc gcaaacataa tcgtcggcgg tgccccgcag
     3961 ccatcggtgg cggcccggcc gcgaatcggc tcgtgctagt ccttgaggat gaaggtgacc
     4021 ttcatcagca cccggtattc cgtgatcttc cccttctcga tcacgacctg ttggctcttg
     4081 atccacgccc cggtgaggtt ccggagggtc ttgtcggctc gcgcgatgcc agcggtgatc
     4141 gcgtcttcga agctcttggt ggaagcggac tggatctcgg tgatctttgc gacggccatg
     4201 agagcgctcc aggccagagg gactggcggt gaagggatac gacggaggac ggagctcggc
     4261 tgctccgacg ctgcaccggc accagcgatg ttaaccgaac cgcgcgggcg ggcaaaggct
     4321 ggcgccaccc cgacccggag cgtcacccca aacgtgccgc tatacggagc agcaacagca
     4381 ccagcatcgt gacggccagg acgagggcga cggtggcaaa ggcgagaacg acccggatcc
     4441 gccggaggcc cgcctgctgc aaccggatgg attcctgctg gttctgcagg gcctcgccat
     4501 agcgctccgt gtgcagccgc tggagatcgc gaatctcttc cagcaatcgg atgatccggt
     4561 cgtccgtcat gtggtctcca cctcccgctt atgccggcgt ctcgccgagc ccgtccagca
     4621 ggcgctcgta atagatcaat gggtcgccct tgtagaccac ccggccacgc tcggtgaacc
     4681 ccccgcgggc atagaaccct cccgccccgg cttccgcgtc aaaggcatcg agacgcaggg
     4741 cgtccgcagg ccagtccacc gcaacgcggc acgcgtcctc gagggcccgg gttccgagcc
     4801 cccgcccttg atgggcgacc gacaccgcca ttccggtcag gtacagcggc cgcttcaccg
     4861 gcgtgaagta gctgacgtcg atggcccacg gcttcctggc cgccagccgc accacggtca
     4921 gaatgcgctt gccctccctc ccgacccgga cccgggcatg tcgtcgcgcg aacgccgcct
     4981 cccgctcggt caccagtgtg gaccagggac ctgccccgaa acgggccgtc agcgcgccgg
     5041 aggccgcgtt ctggagggcc gcgatcgccg ggacgtcgcc tggggtcgca tcgcgaaacc
     5101 gcaggatcat cgcgaaaccc gcgtcccgct gccgtcgtcg ggttcgacag gccgccaccc
     5161 gtgcggagga cgcatgtctc gacctgctcg atccaccgct tcactcgctc tcgccacggc
     5221 actcctcctg tccgcctgca gcggaacgcg gcgtgccggc ctcacggccg ccgactccac
     5281 ggcgctccgt gctctcgacc aggcctacgt cgaggcctgg ctggccgacg ataccgcggc
     5341 ggtgctggcg accctcgcgc cggacgcggt cctcatgccg cccggtgctc caccgctggc
     5401 gaccgccgac gcgattcagg cgttctggtg gccgcaggac gggtcgcgta cccggatcac
     5461 ccactacacc accaccatcg acgagatcgc cggtacgccg gacctggcct atatgcgagg
     5521 gacgggtcgc ctgacgttcg tctaccggaa ggacaccctt cgcctggagc agacgagccg
     5581 caacacgacc ttgacgctac tggcgcgagg tgccgacggc cgatggctga ttcaccggcg
     5641 catgtgggga ccggcggctc cttgaggcga agtcctcggg aatgaatctg acttttccga
     5701 ggcagccgtg gaaggccgtc accctcacgg ggagcgcaac ccaccgataa cttgaaggtc
     5761 cctctcagcg accggacgtg tccatgtcgt ggccccgccg tgcgatcgtg tccgccgttc
     5821 tcgccagcct cgcggccgcc tgcgcccgcc ccagccccaa cgagacgatc cgcctccgcc
//
LOCUS       DASUYN010000527         3363 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_828489, whole genome shotgun sequence.
ACCESSION   DASUYN010000527 DASUYN010000000
VERSION     DASUYN010000527.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3363)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3363)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3363
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_828489"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..549)
                     /locus_tag="VF061_10275"
     CDS             complement(<1..549)
                     /locus_tag="VF061_10275"
                     /inference="COORDINATES: protein motif:HMM:NF013237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX6669936.1"
                     /translation="MSPRRPGLSTLAIHGVPRRRPDWSPIAPSIVQSSTYTNPVGSHE
                     DVLYTRYGNTPTQVELARKYALLEGAEEAIFLASGMGATALAHLAVLRPGDHLVSSAW
                     IYGGTRRLFEEEMVRLGIDVTFVDPEQHRLWRRSVRKNTRAIFVETPTNPTMRVLDLA
                     PLAQVAREFGLALLVDATFASPI"
     gene            complement(546..1085)
                     /locus_tag="VF061_10280"
     CDS             complement(546..1085)
                     /locus_tag="VF061_10280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669937.1"
                     /translation="MIETIRIGHLLRETATSPYRHLVTRPTGAAVRDRIEAALSRSDC
                     RTALLDFSDIELLDFSCAEEIVAKLLLAQAAPQPRFVVLRGLRDDQHDAIEQVLTHHR
                     LAVAALVAGGEPVLLGSVSGDVRAAFTCVCRLGRACVADLARALDWPESRAGEALEIL
                     TLHRLVRPEGDLRYPLLVA"
     gene            complement(1082..1987)
                     /locus_tag="VF061_10285"
     CDS             complement(1082..1987)
                     /locus_tag="VF061_10285"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX6669938.1"
                     /translation="MTRVIEVPAHFDDRSFDQFAGDFGAWPPEEKLLLDARGAQWASP
                     YGLIGMLTAGQAVAEAGLERPLFTVPTSDEVKRYWARVGFFKHAAELFELHGRVPKAA
                     ATGPSDVLLDVTPVRAMEDVHQVVEKISDTASRILHGELGLERNATMRFSMALSESCQ
                     NIVEHAGTGGWVAVQVYTFRRRLGRRVAVIAVSDAGIGFRRSLESTHAKRFGERWGDG
                     AALEAALIQGVSRFRDPGRGQGLAGIKGFLDRWKGKISIRSGTARLSIVPTWDDDVPL
                     ADHLPFFPGAQVQITIPATQEAERR"
     gene            complement(1984..2952)
                     /locus_tag="VF061_10290"
     CDS             complement(1984..2952)
                     /locus_tag="VF061_10290"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HEX6669939.1"
                     /translation="MPRVGILGSLVWDQIYGRDPLAEPVEEWGGVAYALASLDASVAP
                     GWEIVPLIKVGQDLAAKARNFLGGLRHLTPGGRCVEVPAPNNRVVLHYYSTERRTERM
                     SGGVPGWTWSELGPMVRDLDALYLNFISGFELALGTAQALRQGFRGPIYVDLHSLLLG
                     MQHDGVRVPRALQDAASWMGCFDVIQLNEDEMRQLSPDPLSLAAEAIGAGTSLLIVTL
                     AAKGAAYVAAPGFDGWPGQGDGRTGGQAEGAAALRTALIPAPTVDALDPTGCGDVFGA
                     AAAARLFAGDSVETAIRHANAMAARNAAFRGAGGLSRHLRGELVLP"
     gene            complement(2945..>3363)
                     /locus_tag="VF061_10295"
     CDS             complement(2945..>3363)
                     /locus_tag="VF061_10295"
                     /inference="COORDINATES: protein motif:HMM:NF012692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HEX6669940.1"
                     /translation="GCLEAYASGPNIALRAIEAIEAGAETRLPGYVGGDIRQITAQTV
                     YEAAHDGDELALEVVNDTARFLAVGVANLLNVFNPEVVVVCGGVTLAGDHLFVPLRRE
                     VARRAFKPAVAACRIVPGELVGTAGVYGAAKTFLDA"
BASE COUNT          496 a         1215 c         1206 g          446 t
ORIGIN      
        1 gatggggctc gcgaacgtcg catccaccag cagcgcgagg ccgaactccc gcgccacctg
       61 cgcgagaggc gccaggtcca ggacccgcat cgtgggattg gtcggcgtct ccacgaagat
      121 ggctcgggtg ttcttgcgga ccgagcggcg ccagagccgg tgctgctccg gatccacgaa
      181 ggtgacgtcg atcccgagcc ggaccatctc ctcctcgaac aggcgccggg tgccgccgta
      241 gatccaggcg ctgctgacga ggtggtcccc ggggcggagc acggccaggt gcgcgagcgc
      301 ggtggcaccc atcccgctcg cgaggaagat ggcctcttcc gccccctcga gcagggcgta
      361 cttccgcgcc agctccacct gggtgggcgt attcccgtag cgggtgtaca gcacatcctc
      421 gtgggagccg accggattgg tgtaggtgct gctctggacg atcgaaggcg cgatgggcga
      481 ccagtccggg cggcggcgag gcacgccgtg gatcgccagg gtcgagaggc cggggcgccg
      541 tgggctcatg cgacgagcag ggggtaacgc agatcgcctt cgggacgaac cagtcgatgg
      601 agggtgagga tctcgagcgc ctcgccggcc cgcgactccg gccagtcgag cgcccgggcc
      661 aggtccgcca cgcaggctcg gcccagccgg cagacgcagg tgaaggcggc acgcacgtcg
      721 cccgagacgg agccgagcag cacgggctcg ccgccggcca ccagggcggc gaccgcgagc
      781 cggtggtggg tgagcacctg ctcgatcgcg tcatgctggt cgtcgcggag cccgcggagc
      841 accacgaacc gcggctgcgg ggcggcctgc gccagcagca gcttcgcgac gatctcctcg
      901 gcgcagctga agtcgagcag ctcgatgtcg gagaagtcca gcagggcggt acggcagtcg
      961 gagcgggaga gggcggcctc gatgcgatcg cgcaccgccg cgccggtggg ccgggtgacg
     1021 agatggcggt agggcgaggt ggccgtctcg cgcaacaggt gaccgatccg gatggtctcg
     1081 atcatctgcg ctccgcctcc tgggtcgcgg ggatggtgat ctgcacctgg gctccgggga
     1141 agaacggcag gtggtcggcc agcggcacgt cgtcgtccca cgtcggcacg atcgagaggc
     1201 gggcggttcc gctccgaatc gagatcttgc ccttccagcg gtccaggaag cccttgatgc
     1261 ccgcgagccc ttgcccgcgg ccggggtcgc gaaaccgact cacgccctgg atcagcgccg
     1321 cctccagcgc cgcgccgtca ccccaccgct cgccgaagcg cttggcgtgg gtgctctcca
     1381 gcgagcgccg gaagccgatg cccgcatcgc tcacggcgat cacggccacg cgccggccca
     1441 ggcgacgccg gaaggtatac acctgcaccg ccacccagcc gccggtgccc gcgtgctcca
     1501 caatattctg gcatgattcg gaaagcgcca tactgaagcg catggtcgcg ttgcgctcga
     1561 ggcccagctc gccgtggagg atgcgtgacg cggtgtcgct gatcttctcc acgacctggt
     1621 gcacgtcctc catcgcccgg acgggagtca cgtcgagcag cacgtcactg gggccggtcg
     1681 ccgccgcctt gggcacccgg ccgtggagct cgaacagctc cgcggcgtgc ttgaagaaac
     1741 ccaccctggc ccagtagcgc ttcacctcgt cgctggtggg caccgtgaag agcgggcgct
     1801 ccagccccgc ctcggcgacg gcctggcccg cggtcagcat cccgatgagc ccgtagggtg
     1861 aggcccactg cgcgccccgg gcgtccagca ggagcttctc ctccggcggc caggccccga
     1921 agtcgccggc gaactggtcg aagctccggt cgtcgaagtg cgcgggaacc tcgatcaccc
     1981 gggtcacggc agcaccagct ccccccgcag gtggcgcgag agtccgcccg ccccgcggaa
     2041 cgccgcgttc cgcgcggcca tggcgttggc atggcggatc gccgtctcca ccgagtcgcc
     2101 ggcgaagagc cgcgccgcgg cggccgcccc gaacacgtcg ccgcagccgg tcgggtcgag
     2161 ggcgtcgacg gtcggggcgg ggatgagcgc ggtgcggagc gcggcggccc cttccgcctg
     2221 tccgcccgtc cgcccgtccc cctgtcccgg ccatccgtcg aaccccggcg ccgccacgta
     2281 ggccgcgccc tttgccgcga gggtgacgat caggagcgag gtgcccgcgc cgatggcctc
     2341 cgccgcgagg ctcaaggggt cgggagagag ctggcgcatc tcgtcctcgt tgagctgaat
     2401 cacgtcgaag cagcccatcc agctggccgc gtcctggagc gcgcggggca cccggacacc
     2461 gtcgtgctgc atgcccagca gcaggctgtg gagatccacg tagatcggcc cgcgaaaccc
     2521 ctgccgcagc gcctgcgcgg tgcccagcgc gagctcgaag ccggagatga agttgagata
     2581 gagcgcgtcg agatcgcgca ccatcggccc cagctcgctc caggtccacc ccggcacgcc
     2641 gccggacatc cgctcggtgc gccgctcggt ggagtagtag tggaggacca cccggttgtt
     2701 gggcgcgggc acctcgacgc agcggccgcc cggggtgagg tgccggagcc cgccgaggaa
     2761 gttgcgcgcc ttcgccgcga ggtcctgccc gaccttgatc agcggcacga tctcccagcc
     2821 cggcgccacg ctggcgtcga ggctggcgag ggcataggcc acgccgcccc attcctccac
     2881 cggctccgcc agcgggtcgc gaccgtagat ctggtcccac accagggagc ccaggatgcc
     2941 gactctaggc atccaggaag gtcttggccg ccccgtacac ccccgcggtg cccaccagct
     3001 cgccgggcac gatgcgacag gcggcgaccg cgggcttgaa ggcgcgccgg gccacctcgc
     3061 gccgcagcgg cacgaagagg tggtccccgg cgagggtgac gccgccgcac accaccacga
     3121 cctcggggtt gaagacgttg agcaggttgg ccaccccgac ggcgaggaac cgggcggtgt
     3181 cgttcaccac ctccagcgcg agctcgtcgc cgtcgtgcgc cgcttcatag acggtctgag
     3241 ccgtgatctg ccggatgtcg ccgccgacgt agcccggcag cctggtctcg gcgcccgcct
     3301 cgatcgcctc gatcgcccga agggcgatgt tgggccccga ggcataggcc tccagacagc
     3361 cgt
//
LOCUS       DASUYN010000528         3353 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1934399, whole genome shotgun sequence.
ACCESSION   DASUYN010000528 DASUYN010000000
VERSION     DASUYN010000528.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3353)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3353)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3353
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1934399"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..184
                     /locus_tag="VF061_10300"
     CDS             <1..184
                     /locus_tag="VF061_10300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669941.1"
                     /translation="SPYVALLRGEEPYGYQELEDSLQVFARGFGTRAGPAGPGRPDSL
                     PAQQGPGAPRRRGLEP"
     gene            181..1059
                     /locus_tag="VF061_10305"
     CDS             181..1059
                     /locus_tag="VF061_10305"
                     /EC_number="1.3.1.14"
                     /inference="COORDINATES: protein motif:HMM:NF005574.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004152 - dihydroorotate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase"
                     /protein_id="HEX6669942.1"
                     /translation="MTAESRLSRTVFGRRFQNPILLASGTAGFGRELAGVTDLERLGG
                     VVTKAVSLEPRAGNRPPRVAEFRGGMLNSVGLANPGLAAVRERDLPWLAANLRRAQVL
                     VNVVGFTVEEYAAVVAGLDGAAGVAGFELNLSCPNTSAGGIEFGASEDCVRRIVTLCR
                     ARTRLPLVAKLSPVLPDIAGMALVARDAGADGVTVVNTLPGLLRDEVGMPRLGAGNGG
                     VSGPALLPVGVLAAARVVERTGGMPVIGCGGVRSAEDARQYLRVGAALVGIGTAGLAD
                     PRLPERIVRDLERADG"
     gene            1052..1744
                     /gene="pyrF"
                     /locus_tag="VF061_10310"
     CDS             1052..1744
                     /gene="pyrF"
                     /locus_tag="VF061_10310"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: protein motif:HMM:TIGR01740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004590 - orotidine-5'-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0044205 - 'de novo' UMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HEX6669943.1"
                     /translation="MAEVVLALDLPTAAEAMRLLERIPATPWVKVGSILMTRDGAPLV
                     RALVARGHRVFLDLKWHDIPNTVAGAVRAARELGVAMATVHTLGGRTMMEAATEAAGG
                     ALALVGVTVLTSHDEVSYGHALGREGVALDDEVARLADEAVSAGLSGVVCSPAEIEVV
                     RRVLPDGAAVVVPGIRSESDPVGDQVRVATAAAAAGAGATHLVVGRPILNAPDPAAAL
                     ARLATEADCVPS"
     gene            1729..2145
                     /locus_tag="VF061_10315"
     CDS             1729..2145
                     /locus_tag="VF061_10315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669944.1"
                     /translation="MRAFLIALVLLLAPWVAGAQQRHLTDAAESARRAWFEHDARGLV
                     ADAPRLLVQLPGADPSIALGPAQAAALLTDFMVQGLEVETLVRAAEEVEPGRGYVELQ
                     RRYRIAGTQDVRIQSLLLGYRLLRTGWRLVELRVVG"
     gene            2261..2377
                     /gene="rpmJ"
                     /locus_tag="VF061_10320"
     CDS             2261..2377
                     /gene="rpmJ"
                     /locus_tag="VF061_10320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020322760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HEX6669945.1"
                     /translation="MKVRSSVKPICEHCKVVKRAGVTRIICKRNPKHKQRQG"
     gene            2380..2760
                     /gene="rpsM"
                     /locus_tag="VF061_10325"
     CDS             2380..2760
                     /gene="rpsM"
                     /locus_tag="VF061_10325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HEX6669946.1"
                     /translation="MARIAGVDLPREKRVEIALTYIFGIGRPTSGRILGETGISPDTR
                     VRDLSDAEVARLRQMIERSVKVEGALRTEVAMNIKRLMDIGSYRGIRHRRGLPVRGQR
                     THTNARTKKGPRRAIAGKKKVTKK"
     gene            2760..3176
                     /gene="rpsK"
                     /locus_tag="VF061_10330"
     CDS             2760..3176
                     /gene="rpsK"
                     /locus_tag="VF061_10330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002633584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HEX6669947.1"
                     /translation="MTAPATPPAAPAKAPGAKRGKKVVESEGIAHISATFNNLLITIT
                     DMRGNALAWGSAGKAGFKGSKKSTPFAATVAAENCGREAMNLGLRRVHVRVQGPGSGR
                     ESAIQALASVGLRVVSIRDVTPIPHNGCRPPKKRRV"
BASE COUNT          457 a         1188 c         1225 g          483 t
ORIGIN      
        1 gagtccctac gtcgcgctgc tccgcggcga ggagccttac ggctaccagg agctggagga
       61 ctcgctccag gtcttcgccc gcggcttcgg cacgcgcgcc ggcccggccg gcccgggccg
      121 acccgactcg ctccccgcac agcagggccc gggcgcgccc cgccggcgcg ggctcgagcc
      181 gtgacggcgg agtcccgtct ctcccgaacc gtcttcggcc gccgcttcca gaatcccatc
      241 ctcctcgcct ccggcacggc cggcttcggc cgggaactgg ccggcgtcac cgatctcgag
      301 cggctcggcg gggtggtgac caaggcggtc tcactggagc cacgcgccgg gaaccggccg
      361 ccgcgggtgg cggagttccg cggcgggatg ctcaactcgg tggggctggc gaaccccggg
      421 ctggccgcgg tccgggagcg ggacctgccg tggctcgccg ccaacctgcg ccgggcgcag
      481 gtgctggtga acgtcgtcgg cttcacggtc gaggagtatg cggcggtcgt cgcgggactg
      541 gacggtgcgg cgggcgtggc cggcttcgag ctcaacctct cctgtcccaa cacctcggcc
      601 ggcggcatcg agttcggtgc gagcgaggac tgcgtccggc gcatcgtgac cctgtgccgc
      661 gcgcgaaccc ggctgcccct ggtcgccaag ctctcgccgg tgttgcccga tatcgcgggt
      721 atggcgctgg tcgcgaggga tgcgggggcg gacggggtca ccgtggtgaa caccctgccg
      781 ggcctgctgc gcgacgaggt gggtatgccg aggctcggtg ccgggaatgg cggggtgagc
      841 gggcccgcgc tgttgccggt gggggtactc gccgcggccc gggtggtgga gcgcaccggc
      901 ggcatgcccg tcatcggctg cggcggagtg cgctcggcgg aggacgcccg ccagtacctg
      961 agggtcggcg ccgctctggt cgggatcgga acggcggggc tggcggaccc tcggctcccg
     1021 gaacggatcg tgcgagacct ggagcgcgcc gatggctgag gtcgtgctcg cgctggacct
     1081 gcccacggcc gcggaggcga tgcggctgct ggagcgcatc cccgccacgc cgtgggtcaa
     1141 ggtagggtcc atcctgatga cgcgggacgg cgcgccgctc gtgcgcgcgc tggtggcgag
     1201 agggcaccgg gtatttctcg atctcaagtg gcacgacatc cccaacaccg tggccggcgc
     1261 ggtccgcgcc gctcgcgagc tcggagtcgc gatggccacg gtgcacaccc tgggcggccg
     1321 gacgatgatg gaggcggcga cggaggccgc gggcggagcg ctcgcgctgg tcggcgtcac
     1381 cgtgctgacc tcgcacgacg aggtctccta cggccacgcc ctcggccggg agggcgtggc
     1441 gctggatgac gaggtggccc ggctggcgga cgaggcggtg tctgccggtc tgagcggtgt
     1501 ggtctgttcg ccggcggaga tcgaggtcgt ccgccgggtc ctgccggatg gcgcggctgt
     1561 cgtggtgccg ggcatccgga gcgagtccga cccggtcggc gaccaggtgc gagtcgccac
     1621 ggccgcggcc gcggcgggtg ccggcgccac ccatctcgtc gtcggccgcc ccatcctcaa
     1681 tgcgccggat cccgccgcgg cactggcccg gttggcgacg gaggccgatt gcgtgccttc
     1741 ctgattgcgc tggtcctgct gctcgcgccc tgggtggccg gagcccagca gcgccacctg
     1801 accgacgccg ccgagagcgc ccggcgggcg tggttcgagc acgacgctcg cgggctggtg
     1861 gcggacgcgc cccgactgct ggtccagctt ccgggggcgg atccgtccat cgcgctcggg
     1921 ccggcgcagg ccgcggcgct gctcaccgac ttcatggtgc aggggctgga agtggagacg
     1981 ctggtccggg cggcggagga ggtggagccg gggcggggct acgtcgagct ccagcgccgc
     2041 taccggatcg ccgggacgca ggacgttcgg atccagagcc tgctcctggg ctatcgcctg
     2101 ctccggacgg gatggcggct ggtcgagctc agggtcgtgg ggtgagccct ccgcgccctt
     2161 catccgtgac tcctaacctc accagtcccc cacacttgca ccccctccgg accctgtcta
     2221 tattgccctg ctagccctta accggcccgg gagtctcagc gtgaaggttc gttccagcgt
     2281 caagccgatc tgcgagcact gcaaagtcgt caagcgtgca ggcgtcactc gcatcatctg
     2341 caagcgcaat cccaagcaca aacagcggca aggctgatca tggcacgcat cgcaggcgtg
     2401 gatctcccgc gcgagaagcg ggtcgagatc gcgctcacct acatcttcgg catcggccgg
     2461 cccaccagcg gccgcatcct cggtgagacc ggcatcagcc ccgacacccg ggtccgcgat
     2521 ctctcggacg ccgaggtcgc ccggctccgc cagatgatcg agcgctcggt caaggtggaa
     2581 ggcgccctcc gcaccgaagt cgccatgaac atcaagcggc tgatggacat cggcagctac
     2641 cggggcatcc gccaccggcg gggcctgccg gtccgcggcc agcgcaccca caccaacgcg
     2701 cgcaccaaga aggggccgcg tcgggccatc gccggcaaga agaaagtgac gaagaagtaa
     2761 tgaccgctcc tgctactcct ccggcggctc cggccaaggc gcccggcgcc aagcggggca
     2821 agaaggtcgt cgagtccgag ggcatcgccc acatctcggc gacgttcaac aacctgctca
     2881 tcacgatcac cgacatgcgg ggcaacgcgc tcgcgtgggg atcggcgggc aaggccgggt
     2941 tcaagggctc caagaagtcc actccgttcg ccgccaccgt cgccgccgag aactgcggcc
     3001 gcgaggcgat gaatctcggg ctccgccgcg tgcacgtgcg ggtgcagggc cccggcagcg
     3061 gccgcgagtc ggccatccag gcgctcgcgt cggtcggcct ccgcgtcgtc agcattcggg
     3121 acgtcacgcc gattccgcac aacggctgcc gcccgcccaa gaagcgccgg gtctagagaa
     3181 cccttgactg acggtaccat gaccattgat ctgaccgggt tggtgcgccc gcatctcgtc
     3241 gagatgacga agcgcgacga caaccccaac gccgccgagt tccgcctcca gccgctggag
     3301 cgtggcttcg gctacaccct cggtaattcg ctccgccggc tgctcctctc ctc
//
LOCUS       DASUYN010000529         2760 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_391621, whole genome shotgun sequence.
ACCESSION   DASUYN010000529 DASUYN010000000
VERSION     DASUYN010000529.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2760)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2760)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2760
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_391621"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            156..1136
                     /locus_tag="VF061_10335"
     CDS             156..1136
                     /locus_tag="VF061_10335"
                     /inference="COORDINATES: protein motif:HMM:NF019292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside recognition domain-containing
                     protein"
                     /protein_id="HEX6669948.1"
                     /translation="MLNYIWAGLIVSSLVFALGYDIRDLSADRYRNGKPLPVALAFPQ
                     GYDPGARRVPVEIRIDSAEYARFYGTAGGPTKRYEGYLLQSQEGTQLRFAKGAALAEP
                     LATVAKVSRSREEELQGTIAGPVAPDPASQTANAGVLFTPVRFVKLNAIASAALDFAK
                     TAAEISLGLIGVLALFLGLLKIAEDSGIVFALVKLVRPILRPLFPEIPPDHPALGMIA
                     LNLTATVFGLGNAATPFGIKAMEELQTLNRSEDTATNSMVMLLAINTASLQLVPPVLL
                     LALMGTQINTLIFPILTTTVLGLIVAIAAAKLLGRLPGYRASDPNRTPQA"
     gene            1144..1686
                     /locus_tag="VF061_10340"
     CDS             1144..1686
                     /locus_tag="VF061_10340"
                     /inference="COORDINATES: protein motif:HMM:NF019292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside recognition domain-containing
                     protein"
                     /protein_id="HEX6669949.1"
                     /translation="MDTVRDTISILSVFVLPIILVGFPLYGIIKRVPVYESFVEGARD
                     GFQVAVRIIPYLVAILFAIAMFRASGAMEALTGALDPVLGLIGFPAELLPMAIIRSLS
                     GSGSAALVVDMINQYGEDSIRVKMAAVRYGSSETTFYVIAVYFGAVGIRKTRHAVPAG
                     LLADAAAMIIAVWTVRLLFS"
     gene            1856..>2760
                     /locus_tag="VF061_10345"
     CDS             1856..>2760
                     /locus_tag="VF061_10345"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX6669950.1"
                     /translation="MAVVFLGRDLRHDRAVAIKVLHPELAAALGPERFLREIRLAGRL
                     DHPAILAVLDSGEFQGRVWYAMPFVDGGSLRQRLERDVQLGIGEAVRIALAVAGALEH
                     AHRQGIVHRDIKPENILLSGDRVLLADFGLAKLLDSADGARLTDTGLALGTPTYMSPE
                     QGAADPHLDARTDVYALGCVLYEMLAGQPPFTGATAQSILARHAVEPMPSLRTVRTTV
                     PPALESAIIKAAAKVPADRFATAGEFAKVLSGEAVTAETPARVPATGGSATRRSWLLA
                     AGVLLVAVGAAATGMARSRGRGPPVV"
BASE COUNT          376 a          982 c          952 g          450 t
ORIGIN      
        1 gaatgggtcc gctacgcacg cggtcgggca ctggtgacgg agatccactt cccggtcgcg
       61 ccgttgtgag gccgggctct cgccttgcga gagcctaccg tccggcccta ttcgttccct
      121 gcctcccatt ccctccacca caacctggcc ggaccatgct gaactacatc tgggcgggtc
      181 tgatcgtctc cagcctcgtc ttcgccctgg ggtacgacat ccgcgacctg agcgccgacc
      241 ggtaccggaa cgggaagccg ctccctgtgg cgctcgcgtt cccccagggc tacgaccccg
      301 gcgcgcgtcg ggtaccggtc gagatccgga tcgactcggc ggagtatgcg cgattctacg
      361 ggacggccgg cggcccgacg aagcggtacg agggctacct gctccagagt caggagggca
      421 cccagctccg gttcgcgaag ggcgccgcct tggccgagcc gctggcgacg gtcgccaagg
      481 tctcgcgctc gcgcgaggag gagctgcagg gcacgatcgc cggccccgtc gcgcccgatc
      541 cggcgtcgca gacggcgaac gccggcgtgc tgttcacccc ggtacgcttc gtcaagctga
      601 acgcgatcgc ctccgccgcc ctggacttcg ccaagaccgc ggcggagatc tccctcggtc
      661 tgatcggcgt gctcgcgctc ttcctcggcc tgctcaagat cgcggaggac tcggggatcg
      721 tgttcgccct ggtgaagctg gtccggccga tcctgcgccc gctcttcccc gagatccctc
      781 ccgatcaccc cgccctgggg atgatcgcgc tcaatctcac ggccacggtg ttcggcctgg
      841 ggaacgcggc gacgccgttc gggatcaagg ccatggaaga gctgcagacg ctcaaccgct
      901 cggaggacac cgcgaccaac tccatggtga tgctgctggc gatcaacacc gcgagcctcc
      961 agctggtccc gccggtcctc ctgctggcgc tcatggggac ccagatcaac acgctgatct
     1021 tcccgatcct gaccacgacc gtgctggggc tgatcgtcgc gatcgcggcc gcgaagctgc
     1081 tggggcggct gcccggctat cgcgcgtccg accccaaccg caccccgcag gcctgaggcc
     1141 gccatggaca cggtacgcga tacgatcagc atcctctccg tcttcgtcct gccgatcatc
     1201 ctggtgggct tcccgctcta cggcatcatc aagcgggtgc cggtgtacga gagcttcgtg
     1261 gagggcgccc gcgacggctt ccaggtggcg gtccgcatca tcccctacct ggtcgcgatt
     1321 ctcttcgcga tcgcgatgtt ccgcgccagc ggcgcgatgg aggcgctgac cggtgcgctc
     1381 gatccggtgc tgggcctgat cggctttccg gccgagctgc tgccgatggc catcatccgg
     1441 tcgctgtcgg gctccgggtc ggcggcgctg gtggtggaca tgatcaacca gtacggggag
     1501 gactccatcc gggtgaagat ggcggcggtg aggtacggct cgagcgaaac gacgttttac
     1561 gtcatcgcgg tgtacttcgg ggcggttgga atccgaaaga ctcggcacgc ggtgccggcg
     1621 gggctgctcg cggatgcggc cgccatgatc atcgcggtct ggacggtccg gctgctgttc
     1681 agttaagggt gtcttcatgg cggcgtgcac ccgccatggc gcccggccgt acccggcagc
     1741 acattccgta cactccggcc aggaaggtat acccctggag atcacaaccg cgcacccgct
     1801 cgcgggggcg ctgcgagagc ggtacacgct cgagcgcgag ctcgggcgcg ggggcatggc
     1861 cgtggtcttc ctcggccgcg acctgcggca cgaccgtgcg gtcgccatca aggtgctgca
     1921 tcccgagctg gccgcggcgc tcgggccgga gcgcttcctt cgggaaatcc gactcgccgg
     1981 acgactcgat caccccgcca tcctcgccgt gctcgactcg ggggagttcc agggacgagt
     2041 ctggtatgcc atgccgttcg tggacggggg atcgctgcgg cagcggctgg agcgggatgt
     2101 ccagctcggc atcggggagg ccgtgcggat cgcgctcgcg gtggcgggcg ctctggagca
     2161 cgcccaccgg cagggcatcg tccaccgcga catcaagccg gagaacattc tcctgagcgg
     2221 cgatcgggtg ctgctcgccg acttcggcct ggcgaagctg ctcgattccg ccgacggggc
     2281 ccggctcacc gacaccggcc tcgcgctcgg cacccctacc tacatgagtc cggagcaggg
     2341 cgcggcggac ccccacctcg acgcccgcac cgacgtctac gccctcggct gcgtgctcta
     2401 cgagatgctg gcgggccagc cgccgttcac cggtgccacc gcgcagtcca tcctcgcgcg
     2461 tcacgccgtg gagccgatgc cgtccttgcg gaccgtccgc acgacggtgc cgccggcgct
     2521 ggagtcggcc atcatcaagg cggccgccaa ggtgcccgcg gaccggttcg cgacggccgg
     2581 ggagttcgcc aaggtgctgt cgggagaggc ggtcaccgcg gagaccccgg ccagagtgcc
     2641 ggcgaccggc ggctcggcca cccgccgctc ctggctgctc gcggcgggtg tgctgctggt
     2701 tgccgtgggc gcggccgcga cgggtatggc ccgatctcgc gggcgcgggc cgcccgtcgt
//
LOCUS       DASUYN010000530         2747 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1712965, whole genome shotgun sequence.
ACCESSION   DASUYN010000530 DASUYN010000000
VERSION     DASUYN010000530.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2747)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2747)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2747
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1712965"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..282)
                     /locus_tag="VF061_10350"
     CDS             complement(<1..282)
                     /locus_tag="VF061_10350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669951.1"
                     /translation="MRLTLLESHRSLLQTTECTVVSLVAHAGVVVFALAATTGGRQLP
                     GDEREARVFFLLPPDRVDVRARQTDILQWGRPGGDLEDGQLRRATEGMQI"
     gene            complement(352..522)
                     /locus_tag="VF061_10355"
     CDS             complement(352..522)
                     /locus_tag="VF061_10355"
                     /inference="COORDINATES: protein motif:HMM:NF039824.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5670 family protein"
                     /protein_id="HEX6669952.1"
                     /translation="MRGLISLGILLVVLWAVAWLVFKTAGFLIHLLLIVGAIMLIVGL
                     VKRAGRAVSRDV"
     gene            complement(875..>2747)
                     /locus_tag="VF061_10360"
     CDS             complement(875..>2747)
                     /locus_tag="VF061_10360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669953.1"
                     /translation="ALAKEPTDRFATAGELSAALEGSATPQPLPAAARASRRRTAALL
                     GVGAVAATAFLFALGLQRHEAKANDAPRIAVLPFDNLGAAGDGYFADGITEEITSRLA
                     MIPTLGVISRTRAEQYRDTDKSIKEIGRELGVAYILEGSVRWEKSAEGSRVRVTPQLI
                     RVSDDRPLWAGRFDETLEEVFEVQSRIAEQVAAELDLALQQPEHEALAAKPTENLQAY
                     DFYLRGNDFLTKAGDPGAVHTAERMYVQAAELDPTFALAFARLARARIWQFHFSDRTA
                     DRLAAARAAVDSALALDPDLPEAHLALGQIHYWGELDYETALREFRLAHAGDPGNGDI
                     AWARGLVERRLGQWDQALASLRKAVELDPRSVVKHMDVFEVYLRQRQYGSAGQYVDRA
                     LALQPDAPIYIFKAMLVVTRDGDLEAATRVLEEGVRKAGLQNLAAWTAQYDLGAALWL
                     RLPDSAQQAIDGVTMAMVGADSAGYYLLKARMHRLRGNRPAGRAHFDSAAAVLEGRTA
                     SRPDDPALHAQLGFAYAGLGRRAEAIREGRQAVELRPIAKDTWLGVDMARSLAITYAT
                     LGEADSAVKQLRVLLEVPSWISVEGLRADPTWDPIRRDPAFRALLAEGRRVGGVALR"
BASE COUNT          409 a         1003 c          949 g          386 t
ORIGIN      
        1 gatctgcatc ccttcggtgg cgcgacgcag ctgtccgtcc tccaggtcgc cgccgggccg
       61 cccccactgg aggatatccg tctggcgcgc ccgcacgtcc acccggtcgg gcggcaggag
      121 gaagaagacc cgggcctccc gctcgtcgcc cggcagctgc cggccgccgg tggtggccgc
      181 gagcgcgaac accaccacgc cggcgtgcgc caccaggctg acgacggtgc actccgtcgt
      241 ctggaggagg ctgcgatggg attccagaag ggtgaggcgc atgcaggccg ccgggaaggc
      301 cggagtgacg atcgcgcgtt caccatatat gacgtacggc cctgttccgc gctacacgtc
      361 ccgggacacc gcacgcccgg cccgcttgac caggcccacg atcagcatga tcgccccgac
      421 gatgagcagg aggtggatga ggaagccggc ggtcttgaac accagccagg ccaccgccca
      481 cagcaccacc agcagtattc ccagcgagat cagtcccctc atcggcgccc ccaggtaaag
      541 tgtgaagcag gacccagcgt gatggttccc atcctagccc tggccgggag gccacccagt
      601 gacttgagtc acgaggcgtg gcctcggtag acaggaacct gccctggcac ggtaccgctc
      661 cgacgggaat gtggggcgga ggggaggagt cagcccgagg ccgaggtggg gagtcctctc
      721 ctaactcctt gactcatatg cacctccgct gctgcatggc ggcgccggat cgccccggca
      781 cgcggattgt ctatgaggag gccgagggga tgactgcgga tggtgaagga aaaggaaggc
      841 ggtgggcgca cctgggaacg ctgccctgcg aacctcagcg caaggcaaca ccgccgaccc
      901 ttctcccctc cgcgagcagg gcccggaacg cagggtcccg ccgaatcgga tcccaggtgg
      961 gatccgcccg aagcccctcc accgagatcc aggaaggcac ctcgagcagc acccgcagct
     1021 gcttgaccgc ggaatccgcc tcgccgagcg tcgcgtaggt gatcgcgaga ctccgggcca
     1081 tgtccacccc cagccaggtg tccttcgcga ttggccgcag ctccaccgct tgccgaccct
     1141 cgcggatggc ctccgcgcgt ctgccgagcc ccgcgtaggc gaagcccagc tgcgcgtgca
     1201 gcgcagggtc gtcgggccgt gacgcggtcc gcccctccag cacggcggcg gcggaatcga
     1261 agtgggctcg gccggccggc cggttgccgc gcagtcggtg catccgggcc ttgagcaggt
     1321 agtaccccgc cgagtcggca cccaccatcg ccatcgtgac gccgtcgatc gcctgctgcg
     1381 ccgagtcggg cagtcgcagc cagagggccg cgccgagatc gtactgtgcc gtccaggccg
     1441 cgaggttctg caggccggcc ttgcggaccc cctcttccag caccctggtg gcggcctcca
     1501 gatcgccgtc ccgggtcacc accagcatcg ccttgaagat gtagatcggc gcatcgggct
     1561 ggagcgcgag cgcgcggtcc acgtactgcc cggccgagcc gtactgccgc tgccgcaggt
     1621 agacctcgaa cacgtccatg tgcttcacca ccgaccgcgg gtcgagctcc accgccttcc
     1681 gcaggctcgc gagggcctgg tcccactgcc ccagcctgcg ctccaccagg ccgcgggccc
     1741 aggcgatgtc gccgttcccc ggatcgcccg cgtgcgccag ccggaactcc cgcagcgccg
     1801 tctcgtagtc cagctcgccc cagtagtgga tctgccccag cgccaggtgg gcctccggga
     1861 ggtccggatc cagcgccagc gccgagtcca ccgcggcccg ggccgccgcc agccggtccg
     1921 ccgtccggtc ggagaagtgg aactgccaga tgcgggcgcg ggccagccgg gcgaaggcca
     1981 gcgcgaacgt ggggtccaac tccgccgcct gcacgtacat ccgctcggcg gtgtggaccg
     2041 cccccggatc tccggccttg gtgaggaaat cgttgccccg gagatagaag tcgtacgcct
     2101 ggaggttctc cgtcggcttc gccgcgagcg cctcgtgctc gggctgctgc agcgcgaggt
     2161 ccagctcggc cgccacctgc tccgcgatgc gcgactggac ctcgaatacc tcctccagcg
     2221 tctcgtcgaa ccggccggcc cagagggggc gatcgtcgga gacccggatg agctggggcg
     2281 tcacccgcac ccggctcccc tcggccgact tctcccaccg cacactgccc tcgaggatgt
     2341 aggcgacccc cagctcgcgg ccgatctcct tgatcgactt gtcggtatcc cggtactgct
     2401 cggccctggt gcgcgagatg acgccgaggg tggggatcat ggcgaggcgg ctggtgatct
     2461 cctcggtgat gccgtcggcg aagtagccgt ctcccgcagc gccgaggttg tcgaacggga
     2521 gcaccgcgat cctgggggcg tcgttcgcct tcgcctcgtg gcgctggagg ccgagggcga
     2581 agaggaatgc cgtcgccgcg accgcgccca cgccgagcag cgcggcggtg cggcggcggg
     2641 aggcgcgggc ggccgcgggc agcggctgcg gcgtggcgga tccttccagg gcggcgctca
     2701 gctcccccgc ggtcgcgaag cgatcggtcg gctccttggc cagagcg
//
LOCUS       DASUYN010000531         9387 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1713692, whole genome shotgun sequence.
ACCESSION   DASUYN010000531 DASUYN010000000
VERSION     DASUYN010000531.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9387)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9387)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9387
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1713692"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..716
                     /locus_tag="VF061_10365"
     CDS             <1..716
                     /locus_tag="VF061_10365"
                     /inference="COORDINATES: protein motif:HMM:NF012686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669954.1"
                     /translation="LDLARPDEALPALVGALLPSGFRGLVVAGLLAALMSSLSGVFNS
                     CSTLITWDVYRKLRPEASERQLVWVGQIATGVLVVFGLLWIPLMELISGQLYQYLQSV
                     QAYIAPPVAAAFLLGILWRRANARGAMAALGLGFVLGMGRLVAELNKASLTGTLRTYA
                     DINFLHFAAMLFVICVAVLIVVSLTAPPPRPEQVEGITFGGVRESRTEEEARSRGLDL
                     ALSALLVLGVLATWLYFSE"
     gene            complement(745..1932)
                     /locus_tag="VF061_10370"
     CDS             complement(745..1932)
                     /locus_tag="VF061_10370"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX6669955.1"
                     /translation="MARHDYLIVGAGMTADAAARGIRQEDTKGTVAVVGAEPHAPYNR
                     PPLSKGLWKGDPVDAIWRNTAETGADVVPGRRIVSVDAAGRRATDDQGSVYEYGKLLL
                     ATGGRPRRFRDAPDDVIYYRTFDDFRRLRELADRGQRFLVVGGGFIGSEIAAALRMQG
                     CEVTLLLRGSGIGEGVYPAELSRWLVSYYRDKGVTVLPGVSVDRVEARSGKLHIPAAG
                     GDGLTADVVVAGLGIEPDVDLARQIGLEVTDGVVVDEYLRSSREDIYAAGDAANFHNP
                     ALDRRVRVEHEDNANTMGEIAGRNMAGARRRYDHLPFFYSDLFDLGYEAVGDVSSRHR
                     TVEDWKEKFREGVIYYLEGGRVRGVLLWNTWGQVDAARALIAEPGPFRPEQLVGRLPI
                     PEG"
     gene            2093..2491
                     /locus_tag="VF061_10375"
     CDS             2093..2491
                     /locus_tag="VF061_10375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4383 domain-containing protein"
                     /protein_id="HEX6669956.1"
                     /translation="MIRWVAAGFAVLFTLVVAMGYVPSFVTAVHGVDRILLDLFKISL
                     LDDVTHAGTAVAGVLAAAHSRRASLLFLTAFGFYYALDAAFYLTYGVLSGQAPMANLM
                     LNAPHIAIAGVMLGLVYWWVPREGAAAVAP"
     gene            2513..4990
                     /locus_tag="VF061_10380"
     CDS             2513..4990
                     /locus_tag="VF061_10380"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEX6669957.1"
                     /translation="MASLPVRVWRRLRPLRRALGALLLLTAAVSIWYFLRTPVLRPGR
                     PPVVNDVTGLNPVPLEGLIVPTTVEEVVEAVRTHDGPIAIGGGRYSMGGQTAAPGALQ
                     IDMRRFDRILALDTAARTITVQAGARWRRVQEAIDPLDLSVQIMQTYANFTVGGSVSV
                     NVHGRYVGQGPLVRSIRSLRVVLADGTLAEASRTENPELFAGVVGGYGGLGVITDVTL
                     DLVPNVRVQRRHEVMPIGEYARYFTDTVRYDSLAIFHNADIYPGDFTTVNAITYWRTD
                     QPVTVPERLVPADRSYRLNRFVLWALSELPGRHWLRRRVVDPVVLRGEPVSWRNREAS
                     YDVAELEPGSRAVETYVLQEYFVPVERFDDWIPRMRRVFRTHRVNVINVSIRHALPDS
                     VSLLAWAPTEVFAFVVYYKQETDVAARHKVRAWTRELVTHVLSLGGSYYLPYQPHATP
                     AQFAAAYPRSGEFFALKRRMDPGNKFRNALWNTYDPLVLAAEPAELTGALLARAELRP
                     GYRRPDSDTFLQHPEWYIVYSSEEYGRHLSGHPPSTFPYGASIGQYWRTYHEAWTATR
                     HTYPPNWAYHVMLWVIGTSYSVELALKGLYENTLGRLSEWTAGGEPAPEDRLAAEVAQ
                     DYGRFIHDRPWYEYRFLPRLLEVWTDPPLWSQHPVRSWERKGFLTLEYGVKAAYAGLI
                     GLATGAAYDPQPPRTELLLRRWTDSLAGTVPGLVVEEWLDSTAVLVSAGRFDPTRDLL
                     LGLARSGPADLRVDAIAGRPVTAFTGVAPRGWAPPGGRGRILHALPLPTDSSRVRLVF
                     ETRTRDLLPWLRELVRDTALTVDHVYD"
     gene            5044..7311
                     /locus_tag="VF061_10385"
     CDS             5044..7311
                     /locus_tag="VF061_10385"
                     /inference="COORDINATES: protein motif:HMM:NF025092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX6669958.1"
                     /translation="MAPGLLGALTVVLAQAGPPAVAGTIRDGESGAPLPGAVVTLTDA
                     DRTAVTDSEGRYRVSAVLPGPQHLAVKRIGYEPRTVHALVPGQDVLRLDLSLRPLPLR
                     LRPIVVHSGVPIRGLEGIEPSAPLDRSITAASLRNHPMLAEPDGFLALSGGDVWVAPE
                     APSGLHLRGGAADHTAYQLDGVPVFSPYHAAGTFSAWNPDALERVEVQSVSPTLVPAD
                     ALAGTVAGLTRAPGTQVRAYGTLSTSHARFTLHGPLGSSGAGFLLSYRTGFPGIIAPE
                     RDASYLRGHTGDLLAKVETPALQGRLRLILYNSGNRLDAAAAAETPGPARSPPRNAYE
                     WDGRSVGATWTRALGGGREVRIQAWNARGEAEAEWSGGSAGRRALEADREDQGVLATA
                     ERASQGRRTGLGVRVQRSRTAYRVAAAGGTGVGTSLDSRIPLASLFARHQESLPAGLT
                     VAAALTATAAAGDLHLAPRAELRMRAASILSFSGSYTRAHQFAQSLRNPESVSGGIFP
                     ADLFLGIGAPGVPVARSDRVALAADLRPLPGVRFGAQAYVAGFDGLVLVAPRTGEPFA
                     TDGFALGRGSSRGVSVELAVSGARYGISASYGLQRVRTTYGDSSYVPGHGTGHLVELG
                     MIVFPTPTASVRLGLTGARGRRGTGLLGAFEWESCNLLDQGCEFAGTPTHDSRHPGGT
                     PLPDYLRLDLGVRKHWHLELGGQDIELGLFGTVTNLFGHRNVLAIATDPATGERSAIE
                     MRPLAPLVVGLDWRF"
     gene            7412..7900
                     /locus_tag="VF061_10390"
     CDS             7412..7900
                     /locus_tag="VF061_10390"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX6669959.1"
                     /translation="MELFHQHFHHLVRYLDRLSGDPELASDLAQEAFVRLHRRGALPD
                     HPEAWLITVAMNLFRNARSTAARRRRLLTVARAEATLGDPVPGPVQALEAADERERVR
                     AAIDRLGERERQLLLLRAEGYGYRELAAALGLHEASVGTLLARAKRAFRAAYDGSPDA
                     PR"
     gene            7887..8618
                     /locus_tag="VF061_10395"
     CDS             7887..8618
                     /locus_tag="VF061_10395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HEX6669960.1"
                     /translation="MHLDDERIQRLLHGGLEPPAEREARRHLESCAGCRGLLEEARAE
                     EAWIFAVLGSVDHPPPAVDPGTLLARAERVWPRWFGRAAALLLGVGLAGVAYAAPGSP
                     LPALLNRLLGNTPDRREQSPGAQAAPATPAQAGIAVLPGDALVIQFASEGDAVATISL
                     TDDEEVVVRAVEGSASFTSAVDRLVIRSAGRARFEILIPRTAPSVDVLADTTPVFRKP
                     AGGPVSAVSPDALGRYTVPLQSPPP"
     gene            8693..>9387
                     /locus_tag="VF061_10400"
     CDS             8693..>9387
                     /locus_tag="VF061_10400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669961.1"
                     /translation="MSGAWRAAAILVLLAACGEDPTQPEYDPRLDPADFVPAVTNPYF
                     PLVPGTTFSYEGQTDEGVETVLVEVLEETRTILGITATVVRDRVFLDGDLIEDTFDWF
                     AQQNTGDVWYLGEDSKEIEDGEVVSTEGSWEAGVDGAKPGIIMWGDPAAHLNEEYRQE
                     FYPGVAEDVATVIGLDERVEVPQGTYTGCIRTEDRNPLESGSVEHKYYCAGVGLTLEG
                     PADGSERFELTEIT"
BASE COUNT         1258 a         3402 c         3283 g         1444 t
ORIGIN      
        1 ggctcgacct cgcccggccc gacgaggcgc tccccgcgct ggtcggggcg ttgctcccct
       61 cgggcttccg cgggctcgtg gtcgcgggac tgctggccgc actgatgagc tcgctctcgg
      121 gcgtgttcaa ctcctgctcc accctcatca cctgggacgt ctaccggaag ctccggcccg
      181 aggcctccga gcgacagctg gtctgggtgg gacagatcgc gaccggggtg ctggtggtct
      241 tcgggctgct gtggatcccg ctgatggagc tgatctcggg ccagctctat cagtatctcc
      301 agagcgtcca ggcctacatc gccccgccgg tggcggcggc gttcctgctc ggcatcctct
      361 ggcggcgggc caacgcccgc ggcgccatgg ccgcgctggg cctcgggttc gtgctgggca
      421 tgggacggct ggtcgcggag ctgaacaagg cgtcgctcac cggcacgctt cgcacgtacg
      481 cggacatcaa cttcctccac ttcgcggcca tgctgttcgt gatctgcgtg gccgtgctga
      541 tcgtcgtgag cctgaccgca ccgccgccgc ggccggagca ggtcgagggg atcaccttcg
      601 gcggtgtgcg ggagtcccgg acggaggagg aggcgcggag ccgcggcctg gacttggcgc
      661 tcagcgcgct gctggtgctc ggcgtgctgg cgacgtggct gtacttctcg gagtgagcag
      721 gtcgatcacc gccctcggca tcgatcagcc ctccgggatc gggagccggc ccaccagctg
      781 ctcgggacgg aacggcccgg gttcggcgat cagcgcccgg gcggcgtcca cctggcccca
      841 ggtgttccag agcaacaccc cccgcacccg tccgccctcc aggtaataga tcacgccctc
      901 gcggaatttc tccttccagt cctcgacggt ccggtgtcgg gagctgacgt cgccgacggc
      961 ctcgtacccc aggtcgaaca ggtcggaata gaagaacggg aggtggtcgt agcggcgccg
     1021 ggcccccgcc atgttccggc ccgcgatctc gcccatggtg ttggcgttgt cctcgtgctc
     1081 cacccggact cggcggtcga gcgcggggtt atggaagttg gcagcatcgc cggcggcgta
     1141 gatgtcttcc cggctgctgc gcaggtactc gtccaccacg acgccgtccg tcacctcgag
     1201 cccgatctgc cgggcgaggt ccacgtcggg ctcgataccg agcccggcga cgacaacgtc
     1261 cgccgtcagc ccgtcgccgc ctgccgcggg gatgtggagc tttccgctcc gcgcctcgac
     1321 ccggtccacg gatacgcccg gcagcaccgt gacgcccttg tcccggtagt agctcaccag
     1381 ccaccgcgac agctcggccg gatatacgcc ttctccgatc ccgcttcccc tcagcaggag
     1441 ggtgacctcg cagccctgca ttcggagcgc ggcggcgatc tcggagccga tgaagccgcc
     1501 gccgaccacc aggaaccgct gtccgcggtc ggcaagctcc cggagccggc ggaagtcgtc
     1561 gaacgtccgg taatagatga cgtcgtcggg ggcatcccgg aaccggcggg gcctgccgcc
     1621 ggtggcgagc agcagcttgc cgtactcgta gaccgacccc tgatcatcgg tcgcgcggcg
     1681 gcccgccgca tccacgctga cgatccgccg gccgggaacg acgtccgcgc cggtctccgc
     1741 ggtattgcgc cagatggcgt cgaccgggtc gcccttccag agccccttgc tcagcggcgg
     1801 ccggttgtag ggggcgtgcg gctccgcccc cacgaccgcg accgtgccct tcgtgtcctc
     1861 ctgccggatg ccgcgtgccg ccgcgtccgc ggtcatgccg gcgccgacga tcagatagtc
     1921 gtgacgggcc actcttcctc ccggaatcgg ctctccccca tggtaagcca atgggcgccg
     1981 cgtgggcaga cccggcgccg gcgccggcga tggacgagac tcgctcgggg agcgataatc
     2041 ctgtcgcggc gggatcgcgc cgcatcgcca cgacactcgt ccgggggccg acatgatccg
     2101 ctgggttgcg gccggtttcg ccgtgctgtt cacgctcgtg gtggccatgg ggtacgtccc
     2161 ctccttcgtg acggcggtgc acggcgtaga ccggatcctg ttggacctct tcaagatcag
     2221 cctgctggac gacgtcaccc acgcgggcac ggccgtcgcg ggggtgctcg ctgcggccca
     2281 ctcccggcgg gcctccctgc tctttctcac ggccttcggg ttctattacg cgctcgatgc
     2341 cgcgttctac ctgacctacg gggtattgag cggacaggcg cccatggcga acctgatgtt
     2401 gaacgccccc cacatcgcca tcgccggtgt gatgctcggg ctggtgtact ggtgggtgcc
     2461 ccgggagggt gccgccgcgg tcgcgccctg aagcgcctca taccgtccac ccatggcttc
     2521 tcttcccgtt cgagtctggc gccggctgcg gccgctgcgc cgcgccctcg gcgcgctgct
     2581 gctcctgacc gcagccgtct ccatctggta cttcctgcgc acgccggtgc tccggcccgg
     2641 ccggccgccg gtggtcaacg acgtcaccgg gctcaacccg gttccgctcg aggggctgat
     2701 cgtgccgacg acggtggagg aggtcgtcga ggcggtccgg acccacgacg ggcccatcgc
     2761 gatcggcggc ggccggtaca gcatgggcgg acagacggcc gctcccggcg cgctgcagat
     2821 cgacatgcgc cgcttcgacc gcatcctggc actggacacc gccgcccgga ccatcacggt
     2881 gcaggcaggc gcgcggtggc gacgggtcca ggaggcgatc gacccgctcg acctctccgt
     2941 ccagatcatg cagacctatg ccaacttcac ggtgggcggc tcggtctcgg tcaacgtcca
     3001 cggccgctac gtcggacagg ggccgctggt acggtccatc cggagtctgc gggtcgtgct
     3061 cgccgacggc accctcgcgg aggcgagccg caccgagaac ccggagctct tcgccggggt
     3121 ggtcggcggc tacggcgggc tcggggtgat caccgacgtc accctcgacc tggtgccgaa
     3181 cgtccgggtg cagcggcggc acgaggtgat gccgatcggg gagtatgccc gctacttcac
     3241 ggacacggtg cgctacgact cgctcgcgat cttccacaac gccgacatct accccggcga
     3301 cttcaccacc gtgaacgcga tcacgtactg gcggacggac cagcccgtca cggtgcccga
     3361 gcgcctggtc cccgcggacc gctcgtaccg gctcaaccgt ttcgtgctct gggcgctctc
     3421 ggagctgccc ggccgacact ggctgcggag gcgcgtggtg gatcccgtgg tgctgcgcgg
     3481 cgagccggtg agctggcgca accgggaggc gagctacgac gtggccgagc tggagccggg
     3541 ctccagggcc gtcgaaacct acgtgctgca ggagtatttc gtcccggtgg agcgcttcga
     3601 cgactggatc ccgaggatgc ggcgcgtctt ccgcacccat cgggtgaacg tgatcaacgt
     3661 gtccatccgc cacgcgctgc ccgattcggt ttccctgctc gcctgggccc ccaccgaggt
     3721 gttcgcgttc gtcgtctact acaagcagga aaccgacgtg gcggcacggc acaaggtccg
     3781 ggcctggacc cgggagctgg tgacgcacgt actgagcctg ggcggctcgt actatctgcc
     3841 ctatcagccg cacgcgaccc cggcccagtt cgccgcggcg tacccgcgct cgggcgagtt
     3901 cttcgccctc aagcgtcgga tggatcccgg gaacaagttc cggaatgcgc tgtggaacac
     3961 ctacgatccg ctggtgctgg cggcggagcc ggcggagctc accggcgccc tgctcgcgcg
     4021 agccgagctc cggccgggct atcgtcgtcc cgattcggac accttcctcc agcaccccga
     4081 gtggtacatc gtgtacagct cggaggagta cggccgccac ctctcgggcc atccgccctc
     4141 gacctttccc tacggcgcct ccatcggcca gtactggcgc acctaccacg aggcgtggac
     4201 cgccacccgc cacacctatc cgcccaattg ggcctaccac gtcatgctgt gggtgatcgg
     4261 caccagctat tcggtcgagc tggcgctgaa gggactctac gagaacacgc tcgggcggct
     4321 gtcggagtgg acggcgggag gcgagcccgc gccggaggac cgcctggccg ccgaggtggc
     4381 ccaggactac ggccggttca tccacgaccg tccctggtac gagtaccgct tcctgcctcg
     4441 gctcctggag gtgtggacgg atccgccgct gtggagccag catcccgtgc ggagctggga
     4501 gcggaagggg ttcctgacgc tggagtacgg cgtcaaggcc gcctatgccg gcctgatcgg
     4561 gctggcgacc ggcgcggcct atgaccccca gccgcccagg acggagctgc tcctgcggcg
     4621 gtggaccgac agtctggctg gcacggtccc ggggctggtc gtagaggagt ggctcgactc
     4681 gaccgccgtg ctggtcagcg cgggccggtt cgacccgacc cgcgacctgc tgctgggcct
     4741 ggcccgaagc gggccggcgg acctccgggt ggacgcgatc gcgggccggc cggtcaccgc
     4801 cttcaccggc gtcgcgcccc gaggctgggc gccgccaggc gggcgcggcc gcatcctgca
     4861 cgccctgccg ctccccacgg actcgagccg cgtccgcctg gtcttcgaga cccgcacccg
     4921 ggacctgctc ccctggctac gggagctggt ccgcgacacc gcgctcaccg tggatcacgt
     4981 gtacgactga accggaacct cccttgcgcc gggctgtccg gcccccaact tgggcggtgg
     5041 tgtatggcac ccgggctgct gggagcgctc accgtggtcc tcgctcaggc gggaccacct
     5101 gccgtcgcgg gcacgatccg ggacggggaa agcggtgcgc cgctgcccgg ggccgtcgtc
     5161 acgctcaccg atgcggatcg caccgccgtt acggacagtg agggtcgcta tcgggtgagc
     5221 gcggtgctgc cgggcccgca gcacctcgca gtcaagcgca tcggctacga gccgcgcacc
     5281 gtgcacgcgc tcgttcccgg ccaggacgtg ctgcggctcg acctctcgct gcggccgctc
     5341 ccgctccggc ttcgcccgat cgtcgttcac tccggcgtcc cgatccgtgg cctcgaagga
     5401 atcgagccct ccgctcccct cgatcgttcg atcacggccg cctccctgcg caaccacccg
     5461 atgctggcgg agcccgacgg ctttctcgcg ctgagcggcg gtgacgtgtg ggtcgcgccc
     5521 gaggcgccca gcggcctcca ccttcgaggc ggcgccgcgg accataccgc ctaccagctc
     5581 gacggtgtgc cggtcttcag cccctatcac gcagcgggaa cgttcagcgc ctggaatccc
     5641 gatgcgctgg agcgggtcga ggtgcagtcc gtatccccca ccctcgtccc ggccgacgcg
     5701 ctggccggca cggtggccgg actaacccgg gcgccgggga cccaggtgcg ggcgtacggc
     5761 accctgagca ccagccacgc acgattcacc ctgcacgggc cgctcggctc gtcgggcgcc
     5821 gggttcctgc tgagctaccg aaccggtttc cccggaatca tcgcgcccga gcgcgacgcc
     5881 tcctacctgc gcggtcatac gggcgacctg ctcgccaagg tggagacccc tgcgctccag
     5941 ggccgcctgc ggctcatcct gtacaacagc ggcaaccgcc tcgatgcggc ggccgcggcg
     6001 gagacgcccg gccccgcccg gagcccgccg cggaacgcct atgagtggga cggtcgctcg
     6061 gtgggcgcta cctggacccg cgcgctcggc ggtgggaggg aggtgcggat ccaggcctgg
     6121 aacgcgcggg gcgaggcgga agcggagtgg agcgggggct ccgcgggacg gcgcgcgctg
     6181 gaggccgatc gcgaagacca gggcgtcctc gccaccgccg agcgggcctc acaggggcgt
     6241 cgcaccggcc tcggcgtccg cgtgcagcgc agccgcacgg cctaccgggt cgcggccgcg
     6301 gggggtaccg gcgtcggcac atccctggat tcgcggattc cgctggcctc tctcttcgcc
     6361 cgccaccagg agtcactgcc cgccggcctg acggtggccg ccgcgctgac ggcgacggcg
     6421 gcggccggcg atctccatct ggcgccccgg gcggagctgc gcatgcgcgc ggcgtccatc
     6481 ctgtccttct ccggcagcta cacgcgagcc catcagttcg cgcagagcct tcgaaacccg
     6541 gaatcggtga gcggcgggat cttcccggcc gatctgttcc tcggcatcgg agcgccaggg
     6601 gtcccggtgg cgcgaagcga tcgggtcgcc ctggctgccg acctgcggcc cttgccgggc
     6661 gtccgattcg gagcccaggc ctacgtcgcc gggttcgatg gcctcgtgct ggtggccccc
     6721 cgcaccggtg agccgttcgc cacggacggc ttcgccctcg gacggggcag ctcgcgaggg
     6781 gtgtccgtgg agctcgccgt gagcggcgcc cgctacggaa tctcggcgag ctacggcctg
     6841 caacgggtcc ggacgacgta cggcgactcg agctacgtgc ccggccacgg caccggccac
     6901 ctcgtcgagc tggggatgat cgtcttcccc acccccacgg cctcggtgcg tctcggcctc
     6961 accggagcgc gcggccgtcg cggcacgggg ctgctcggag cgttcgagtg ggaatcgtgc
     7021 aacctcctcg accagggctg cgagttcgcg ggcacaccca cgcacgacag ccggcatccc
     7081 ggcggcacgc ccctgcccga ctacctccgc ctcgacctcg gcgtgcggaa gcactggcac
     7141 ctggagctcg gcggccagga tatcgagctg gggctgttcg gcaccgtgac caacctgttc
     7201 ggccaccgca atgtgctcgc catcgcgacc gatcccgcga ccggcgagcg gtcggccatc
     7261 gagatgcgtc cgctcgcccc gctggtggtc gggctggact ggcgcttctg atggacgcgt
     7321 cacaaaccct ccccttgccc ggctccttcc cgccgacagt gcggagcggg cgatctcgat
     7381 cctgaggcct cggtcattcc aggaccaggt cgtggagctg ttccatcagc acttccacca
     7441 cctggtccga tacctggatc gcctctccgg cgacccggag ctggcgtccg acctcgccca
     7501 ggaggccttc gtcaggctcc accggcgcgg cgcgctgccc gaccacccgg aggcgtggct
     7561 gatcacggtg gcgatgaacc tctttcggaa cgcgcgatcc accgccgccc gacggcgccg
     7621 gcttctgacg gtggcgaggg cggaggccac gctcggggac ccggtcccgg gtccggtgca
     7681 ggccctcgaa gcggcggacg agcgggagcg ggtccgggcg gcgatcgatc gcctgggcga
     7741 gcgagagcgg cagctgctcc tgctgcgcgc ggagggctac ggctaccgcg agctcgccgc
     7801 cgccctcggc ctgcacgagg cgagcgtcgg taccctgctc gcccgcgcca agcgagcatt
     7861 ccgcgccgcg tacgacggga gccccgatgc acctcgatga cgaacggatc cagcggctgc
     7921 ttcacggagg actggagccg ccggcggagc gggaagcgcg gcggcacctg gagagctgcg
     7981 ccggctgtcg cgggctcctc gaggaggcga gggcggagga agcctggatc ttcgccgtcc
     8041 tcggcagcgt ggatcatcca ccaccggccg tggatccggg cacgctgctg gctcgggcgg
     8101 agcgggtctg gccccgttgg ttcggccggg ccgcggcgct tctgctgggc gtcggcctgg
     8161 cgggagtcgc ctacgctgct cccggctctc cgctcccggc actcctgaac cgcctgctgg
     8221 gcaacacccc tgatcggcgg gagcaatcgc cgggagccca ggccgcgccc gcgacgccgg
     8281 cgcaggccgg catcgccgtc ctccccgggg acgcgctggt gatccagttc gcgtccgagg
     8341 gcgacgccgt ggcgacgatc tccctgaccg acgacgagga ggtcgtggtc cgcgcggtcg
     8401 aagggagcgc gagtttcacc tcggccgtgg accgcctggt cattcggagc gcgggccggg
     8461 cgcgattcga gatcctgatt ccgcgcacgg cgccgtcggt ggacgtcctg gccgacacga
     8521 ctccagtctt ccggaagcct gccggtggac cggtgagcgc cgtgtcaccc gacgcactgg
     8581 ggcgctacac cgttcccctc cagtcaccgc caccctagcg cgtcacatac caccgcgctg
     8641 ccctgttcct atgtcgggcg aacgtgtccg acatctcgaa cgtggaggcg gtatgagtgg
     8701 cgcatggcgg gcggccgcga ttctggtgct tctcgcggcc tgcggcgaag atcccaccca
     8761 gcccgagtac gatccccggc tcgacccggc ggacttcgtg cccgcggtga ccaacccgta
     8821 cttcccactg gtgccgggca ccaccttctc ctacgagggg cagaccgacg agggagtcga
     8881 gacggtgctg gtggaggtgc tggaggagac ccgaaccatc ctcggcatca cggcgaccgt
     8941 ggtccgcgat cgtgtcttcc tggacggcga cctgatcgag gacaccttcg actggttcgc
     9001 ccagcagaac accggggacg tctggtatct gggcgaggat tcaaaggaga tcgaggacgg
     9061 ggaggtcgtg agcaccgaag gctcatggga ggctggtgtg gacggcgcca agcccgggat
     9121 catcatgtgg ggcgaccccg ccgcgcatct gaacgaggag taccggcagg agttctatcc
     9181 gggtgtcgcc gaggacgtgg cgaccgtgat cggactggac gagagggtcg aggtgcccca
     9241 gggcacctat accggctgca tcaggacgga ggaccggaac ccgctggagt cgggctcggt
     9301 ggagcacaag tactactgcg cgggcgtcgg gctcacgctc gaagggccgg ccgacggcag
     9361 cgagcgcttc gagctcacgg agatcac
//
LOCUS       DASUYN010000532         4019 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1935695, whole genome shotgun sequence.
ACCESSION   DASUYN010000532 DASUYN010000000
VERSION     DASUYN010000532.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4019
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1935695"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..981)
                     /locus_tag="VF061_10405"
     CDS             complement(<1..981)
                     /locus_tag="VF061_10405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin carboxylase N-terminal domain-containing
                     protein"
                     /protein_id="HEX6669962.1"
                     /translation="MFKKVLIANRGEIALRVIRACRELGIQTVAVYSEADRESLHVRF
                     ADDDVCIGPPPSRQSYLRIPNIIAAAEITGADAIHPGYGFLAENAEFADTCRASNITF
                     IGPTGEQIRQMGDKATARRLAQEAGVPTVPGSPGTIEDPDEALAFAEQLGFPVIIKAT
                     AGGGGKGMRIAPDGEQFVQSFGLAQNEALAAFGEGSVYVEKYLEHPRHVEIQVIGDCF
                     GKVVHLGERDCSVQRRHQKLIEESPSPALTADLRDRMGRAAVALASNIGYMGAGTLEF
                     LLDTDGSFYFMEMNTRIQVEHPVTEMVTGIDLIKEQLRIAAGEPISFGQDD"
     gene            complement(1003..2184)
                     /locus_tag="VF061_10410"
     CDS             complement(1003..2184)
                     /locus_tag="VF061_10410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HEX6669963.1"
                     /translation="MAEPTAASSAPASTFNFKNTIAQMVQRNASDLLLKVGRPPTVRL
                     NGELHGLDMPPLKPEDLKALAEQVMTPRQVKEFAEKKEADFAIGVPGVGRFRTNIYQQ
                     RGTLAFAFRAIPYEVKTIRELYLPVVLEEIALKPRGLVLVTGITGSGKSTALAAMINH
                     VNQNRRVNVITIEDPIEFLHRDVMSNISQREVGSDTLSFGSALRHVLRQDPDVILIGE
                     IRDMETLDTALKAADTGHLVFSTLHTTDATQTLNRIISFYPPYQHQEIRMLLATALQA
                     VVSLRLVPRADGRGRVPAAEVLINTAAVADNMRDIEKALNIPDLIAEGTVSYGMQSFD
                     QSLMKWFKDGMVSYESALFYSSNPNEFALRVSGVDSASDRKFSEITGDTGVARSLDLT
                     P"
     gene            complement(2177..2704)
                     /gene="accB"
                     /locus_tag="VF061_10415"
     CDS             complement(2177..2704)
                     /gene="accB"
                     /locus_tag="VF061_10415"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HEX6669964.1"
                     /translation="MTPQEMKQLAELLQNVPGIRSIELKDVKGLAQLLRESPEIGSIE
                     IKGWFGTGVVITRTSVAPSYQHAMPLPSTATVAAPADAEPRETPRPAAAPALKEIKSP
                     MVGTYYKAPEPGADPYVKVGSRVTPGQTVCIIEAMKIMNEIEAEIAGVIREVSVEDAQ
                     PVEFGQVLFRVDPHG"
     gene            complement(2851..3939)
                     /locus_tag="VF061_10420"
     CDS             complement(2851..3939)
                     /locus_tag="VF061_10420"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro peptidase family protein"
                     /protein_id="HEX6669965.1"
                     /translation="MAGDRRGERQAALRAALTAEGLDALLVTHLPNIRYLTGFTGSAG
                     LLLVHADSTVLVTDFRYEVQAPAEAGAAARVEVDQASVWERLSRVLGGLPAAAIGIEA
                     HAVTVKDAERIGGLTRSRVVPTSELVERLRAVKSPEEVAAIRAAAELAQDALGEVLPG
                     IRVGQSERDIGAALEAALRRRGSEWHPFPTIVASGPRSALPHARTSARIVQRGEWLLL
                     DFGAQVDGYCADLTRTVVVGARADERQRAMYDLVRCAQGRAREHLRPGMTGREADALA
                     RDVIAGRGFGQAFGHSLGHGLGLEVHEAPRLAATSEGPVPPHAVVTVEPGVYFPGWGG
                     IRLEDDLYLGDDGPELLSDGRTELVELV"
BASE COUNT          576 a         1438 c         1374 g          631 t
ORIGIN      
        1 gtcgtcctgg ccgaacgaga tgggctcgcc cgcggcgatg cgcaactgct ctttgatgag
       61 gtcgatcccg gtcaccatct cggtgaccgg atgctcgacc tggatccggg tgttcatctc
      121 catgaagtag aagctgccgt cagtatcgag caggaactcc agggtgccgg cgcccatgta
      181 gccgatgttc gacgccagcg cgacggcggc gcggcccatc cggtcccgca ggtcggccgt
      241 cagcgcgggg ctggggctct cctcgatcag cttctggtgc cgccgctgca ccgagcagtc
      301 gcgctccccc aggtgcacca ccttgccgaa gcagtccccg atcacctgga tctccacgtg
      361 ccgggggtgc tccagatact tctccacgta caccgagccc tcgccgaagg cggcgagcgc
      421 ctcgttctgc gccagcccga aggactggac gaactgctcg ccgtcgggcg cgatccgcat
      481 gcccttcccg ccgccgcccg ccgtggcctt gatgatcacc ggaaagccga gctgctccgc
      541 gaaggccagc gcctcgtccg gatcctcgat ggtgcccggc gagccgggca cggtggggac
      601 gccggcctcc tgcgccagcc ggcgcgcggt ggccttgtcg cccatctggc ggatctgctc
      661 gccggtgggc ccgatgaagg tgatgttcga ggcccggcag gtgtcggcga actcggcgtt
      721 ctccgccagg aagccgtagc ccgggtggat cgcgtcggcg ccggtgatct cggcggccgc
      781 gatgatgttg gggatccgga ggtaggattg gcggctcggg ggcggcccga tgcagacgtc
      841 gtcgtccgcg aagcggacgt ggagcgactc ccggtccgcc tcgctgtaga cggccacggt
      901 ctggatgccc agctcgcggc aggcccggat cacccggagg gcgatctcgc cccggttggc
      961 gatcagcacc ttcttaaaca aggtggtcga ccttctcgag catcagggcg tcaggtcgag
     1021 cgaccgcgcg acccccgtgt ccccggtgat ctcggagaac ttccgatcgg acgccgagtc
     1081 cacccccgac acccggagcg cgaactcgtt cgggttggac gagtagaaca gggcgctctc
     1141 ataggagacc atgccgtcct tgaaccactt catcagcgac tggtcgaagg actgcatccc
     1201 gtaggagacg gtgccctcgg cgatgaggtc ggggatgttg agcgccttct cgatgtcccg
     1261 catgttgtcg gccacggccg ccgtattgat gaggacttcc gcggccggca cccggccccg
     1321 cccgtcggcc ctggggacca gccggagcga gaccaccgcc tggagcgcgg tggcgagcag
     1381 catccggatc tcctggtgct ggtacggggg atagaacgag atgatccggt tgagcgtctg
     1441 ggtggcgtcg gtggtgtgca gggtggagaa gaccaggtgc ccggtgtccg cggccttgag
     1501 cgccgtgtcg agcgtctcca tgtcgcggat ctcgccgatc aggatcacgt cggggtcctg
     1561 ccgcaggacg tgccgcagcg ccgacccgaa cgacagcgtg tcgctcccca cctcgcgctg
     1621 cgagatgttg gacatcacgt cgcgatggag gaactcgatc gggtcctcga tcgtgatcac
     1681 gttcacccgc cggttctggt tcacgtggtt gatcatcgcg gccagggcgg tggacttgcc
     1741 cgagccggtg atcccggtga ccagcaccag gccgcgcggc ttgagggcga tctcctccag
     1801 caccaccggc aggtacagct cgcggatggt cttcacctcg tacgggatcg cgcggaacgc
     1861 gaaggcgagg gtgccccgct gctggtagat gttggtgcgg aagcggccga caccgggcac
     1921 gccgatggcg aagtcggcct ccttcttctc ggcgaactcc ttcacctgcc gcggcgtcat
     1981 cacctgctcc gcgagcgcct tcaggtcctc gggcttgagc ggcggcatgt cgagtccgtg
     2041 gagctcgccg ttcagccgca ccgtcggggg ccggcccacc ttgagcagca ggtccgaggc
     2101 gttgcgctgc accatctggg cgatggtgtt cttgaagttg aatgtcgaag ccggagcgct
     2161 gctcgcggcg gtcggctcag ccatggggat ccacccggaa gaggacctgg ccgaactcga
     2221 ccggctgggc gtcctccacg ctgacctcgc ggatcacccc ggcgatctcg gcctcgatct
     2281 cgttcatgat cttcatcgct tcgatgatac agacggtctg cccgggggtg acgcggctgc
     2341 cgaccttgac gtagggatcc gcccccggct ccggcgcctt gtagtaggtg cccaccatcg
     2401 gcgacttgat ctccttgagc gctggcgcgg ccgccgggcg cggggtctcg cgcggctcgg
     2461 cgtcggccgg cgccgccacg gtcgccgtgg acggcagcgg catcgcgtgc tggtacgacg
     2521 gggcgacgga ggtacgggtg atcaccaccc cggtcccgaa ccagcccttg atctcgatcg
     2581 agccgatctc gggcgattcc cggagcagct gcgccagccc cttcacgtcc ttgagctcga
     2641 tcgagcggat accgggcacg ttctggagca gctcggcgag ctgcttcatt tcctgtggcg
     2701 tcatagcccc gttggcctcg cggcgccgcg tcgagcggtc cggatcacgt gagcctcctc
     2761 gagcggccgg cgtcattggc tccgtcgcgg cgccggcgtg tccggcacct gggatgatgg
     2821 gatagtgaga atcgaagaca tgagctcgga ctacaccagc tcgaccaact cggtgcgccc
     2881 gtcggagagc agctccggtc cgtcgtcgcc gaggtacagg tcgtcctcca gccggatacc
     2941 gccccacccc ggaaaataga cacccggctc gacggtgacc accgcgtggg gcgggaccgg
     3001 cccctccgag gtggccgcaa gccgcggcgc ctcgtggact tccaggccca gcccgtgccc
     3061 cagcgagtga ccgaacgcct ggccgaaccc ccggccggcg atgacgtcgc gcgcgagggc
     3121 gtcggcttcc cggccggtca taccgggccg caggtgctcc cgcgccctcc cctgggcgca
     3181 ccgcaccagg tcgtacatcg cccgctgacg ctcatccgcc cgggcgccca cgaccaccgt
     3241 gcgggtcagg tcggcgcagt agccatccac ctgcgccccg aaatcgagca gcagccactc
     3301 gccccgctgc acgatccgcg cgctggtgcg cgcgtgcggc agcgccgagc gggggccgct
     3361 ggccacgatg gtgggaaagg ggtgccactc gctcccgcgc cggcggagcg cggcctccag
     3421 cgccgccccg atatcccgct cgctctggcc cacgcgaatc ccgggaagca cctcccccag
     3481 cgcgtcttgc gccagctccg cggcggcccg gatggcggcg acctcttcgg gtgacttcac
     3541 cgcccggagc cgctccacca gctccgaggt cggaaccacc cggctccggg tgagcccgcc
     3601 gatgcgttcc gcgtccttca ccgtcaccgc gtgcgcctcg atgccgatcg cggccgccgg
     3661 cagaccgccg aggacccgcg acaggcgctc ccacacgctg gcctggtcca cctccaccct
     3721 cgccgccgcg ccggcttcgg cgggcgcctg gacctcgtag cggaaatcgg tcaccagcac
     3781 cgtgctgtcg gcgtgcacca gcagcagccc ggccgagccg gtgaagccgg tcaggtaacg
     3841 gatgttcggc agatgggtga cgagcaaggc gtcgagcccc tccgccgtga gcgccgcccg
     3901 cagtgccgcc tgccgctcgc cgcggcggtc acccgccacg gagacggctc accagcgcct
     3961 gcagcgcgag gagataactc tgaaccccga agccggtcac caggccgatc gccagatcg
//
LOCUS       DASUYN010000533         2764 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1935873, whole genome shotgun sequence.
ACCESSION   DASUYN010000533 DASUYN010000000
VERSION     DASUYN010000533.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2764)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2764)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2764
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1935873"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            205..771
                     /locus_tag="VF061_10425"
     CDS             205..771
                     /locus_tag="VF061_10425"
                     /inference="COORDINATES: protein motif:HMM:NF014845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="V4R domain-containing protein"
                     /protein_id="HEX6669966.1"
                     /translation="MTEHSHPHHSGLRLGRRVLHQLRSALERDTGLQASTYLQEAGFA
                     GGEELFAEFREWLLANRGVEDPSQLDAEFLSETLSAFFADQGWGRLEASRLGDAVLAL
                     DSAEWAESVEAGATEFPSCHLTCGMLADFFGRLSDGLVAVMEVECRSRGDGRCRFLAG
                     SPETLGTLYDRMAQGTGYAEALGLSSPT"
     gene            complement(755..1843)
                     /locus_tag="VF061_10430"
     CDS             complement(755..1843)
                     /locus_tag="VF061_10430"
                     /inference="COORDINATES: protein motif:HMM:NF024743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat-containing
                     protein"
                     /protein_id="HEX6669967.1"
                     /translation="MQALATLALALLVLTPSAAAAQQVERFTLDGDDISIYNLAGSLT
                     VEPGAGAVSVELVRGGADAARLRLERGELRGRETLRVVYPSQDVAYAGLETGSSTTLK
                     VREDGTFGDGDGDYRHDHDDDDSDRPRGRTVRITRDRGDLRAHADMKVRVPEGHTVAF
                     HLAVGRVAVTNVNGDILVDSHSAPVTASGSRGRLAVDVGSGHVRVSGAEGELSVDTGS
                     GPVEVTGFRGDELSVDTGSGQVSGSQLSARSMHVDTGSGDIELSAVTCPELMLETGSG
                     SISTDLRGPVRDLSLETGSGDISVRAPATLAGEVEIETASGEIETDFPIQVTRHARDH
                     MVGRIGDGVGRVAIETGSGNVRLLKSAN"
     gene            complement(1907..2410)
                     /locus_tag="VF061_10435"
     CDS             complement(1907..2410)
                     /locus_tag="VF061_10435"
                     /inference="COORDINATES: protein motif:HMM:NF012383.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase family protein"
                     /protein_id="HEX6669968.1"
                     /translation="MRRSQPPTSKGVLEVDWPFFGELCRALALRVAREYEPEIVLGIA
                     KAGVIPGVVVASILQTEFSSMAVTRQEAGAPPVLVSGPPPTIRGRRVLVVDETCDTGS
                     TMKLALNEVRALRPSEVRTAVSFKTGDYSPDFHAFETDSFIILPWDREIIQGGEIVMR
                     PDYAARL"
     gene            2574..>2764
                     /locus_tag="VF061_10440"
     CDS             2574..>2764
                     /locus_tag="VF061_10440"
                     /inference="COORDINATES: protein motif:HMM:NF024820.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX6669969.1"
                     /translation="MIGKESRETLQPQRLDYLNEGLALERQGDYEAALTSYRLAFRDN
                     PSDSRILLNMAIAFTQTGQP"
BASE COUNT          410 a          979 c          964 g          411 t
ORIGIN      
        1 gaggccgccg cgctcatcga gggggcgggc gggcgtgtgg cgggcagcgt gagccggaag
       61 acggatgcgg tggtggcggg cgaggaggcg gggagcaagc tggagaaggc gaaggagctg
      121 ggtgtcgagg tcatcgacga aggtgagctc ttgcgtcgcg tcggccgcgg gtcctaagat
      181 ccaccgtcct caacccaccc gcccatgacc gaacacagcc atccgcatca cagcggcctc
      241 aggctcggcc gccgcgtcct gcaccagctt cgctccgcgc tggagcgcga caccggcctg
      301 caggcctcca cctacctcca ggaagcgggc tttgcgggcg gggaggagct gttcgccgag
      361 ttccgggagt ggctgttggc caaccgcggc gtcgaggacc cgagccagct cgacgcggaa
      421 ttcctgagcg agaccctctc cgccttcttc gccgaccagg gctgggggcg gctggaggcg
      481 agtcgcctgg gcgacgcagt gctcgccctc gattccgccg agtgggccga atcggtggag
      541 gccggtgcga ccgagttccc ttcctgccac ctcacctgcg ggatgctcgc cgacttcttc
      601 ggccgcctct cggacggcct ggtggcggtg atggaggtcg agtgccgttc ccgcggggac
      661 ggacgctgcc gcttcctggc cggctcaccg gagaccctgg ggaccctgta tgaccggatg
      721 gcccagggca ccggttacgc cgaggcgctg ggactcagtt cgccgacttg agcaggcgca
      781 cgttcccgga gccggtctcg atcgccaccc tgccgacccc gtccccgatg cggcccacca
      841 tgtggtcgcg cgcgtggcgg gtgacctgaa tcggaaagtc ggtctcgatc tccccactcg
      901 ccgtctcgat ctccacctcg cccgcgaggg tcgcgggcgc ccgcaccgag atgtcgcccg
      961 agccggtctc cagcgacaga tcccgcaccg ggccgcgcag gtccgtggag atgctcccgc
     1021 tccccgtctc cagcatgagc tcggggcagg tcaccgcgct gagctcgatg tcccccgagc
     1081 cggtgtccac gtgcatggac cgcgcgctca gctggctgcc ggacacctga cccgagccgg
     1141 tgtcgaccga gagctcgtcg ccccggaaac cggtcacctc gaccggcccg gagccggtgt
     1201 ccacgctgag ctcgccttcg gcgccgctga cccggacgtg cccggacccc acatccacgg
     1261 cgagccgccc cctggagccg gaggccgtca ccggcgcgga gtggctgtcg accagaatgt
     1321 caccgttcac gttggtcacg gcgaccctcc cgaccgccag atggaaggcg accgtatgcc
     1381 cctcgggaac ccgcaccttc atgtcggcgt gggcgcgaag gtcgccgcga tcgcgcgtga
     1441 tccgcaccgt ccggccgcgg gggcggtcgg aatcgtcgtc gtcgtggtcg tgacggtagt
     1501 ccccatcgcc gtcgccgaac gtgccgtcct cccggacctt gagggtggtg gaggagccgg
     1561 tctccagtcc ggcgtaggcg acgtcctggg aggggtacac caccctcagc gtctcccgcc
     1621 cccgcagctc gccccgctcg agccggagcc gggcggcatc cgccccgccg cggaccagct
     1681 ccacggacac ggcgccggcg cccggctcga ccgtgaggga cccggccagg ttgtagatgg
     1741 agatgtcgtc gccatccagg gtgaaccgct cgacctgctg ggcggcagcg gcggaagggg
     1801 tgaggaccag gagcgccagc gccagtgtcg ccagagcctg catcggagtc tctccgggat
     1861 gaagaccctg cttagacggg ctcagcctcc ccagggttgc agccggtcag agccgagccg
     1921 cgtagtccgg gcgcatgacg atctcgccgc cctggatgat ctcgcggtcc cacggcagga
     1981 tgatgaagct gtccgtctcg aaggcgtgga agtcggggct gtagtcgccg gtcttgaacg
     2041 agaccgcggt gcgcacctcg gacgggcgca gggcccgcac ttcgttcagc gccagcttca
     2101 tggtgctgcc ggtgtcacag gtctcgtcca cgaccagcac ccgccggccc cggatggtgg
     2161 gtggcggacc agagaccagg accggcggcg ccccggcctc ctgtctggtc acggccatgg
     2221 agctgaactc ggtctgaagg atggaggcga ccaccacccc tggaatcacg cctgccttgg
     2281 cgatgccgag gacgatctcg ggctcgtact cccgcgcaac ccgcagcgcg agggcgcggc
     2341 acagctcgcc gaagaacggc cagtccacct cgaggacgcc cttcgacgtg ggcggttgac
     2401 tgcgacgcat gtgcggctcc gggttgggct tcctcaacct acgcccggag gttgagggcg
     2461 gcaacgcgcg ttgccagggc cgggggcgat cactagattc gcggtacgcc caacgcgttg
     2521 tccccgttcg actttgctcg gagaaccacc gtcccatgag tttctggaga cgcatgatag
     2581 gcaaggagtc ccgcgagacg ctgcaaccgc agcggctgga ctacctgaac gagggattgg
     2641 cgctggagcg tcagggcgac tacgaggccg cgctcacgtc ctatcggctg gcgttccggg
     2701 acaacccgag cgactcccgc atcctgctca acatggccat cgccttcacc cagaccggcc
     2761 agcc
//
LOCUS       DASUYN010000534         3714 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_393255, whole genome shotgun sequence.
ACCESSION   DASUYN010000534 DASUYN010000000
VERSION     DASUYN010000534.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3714)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3714)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3714
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_393255"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(289..750)
                     /locus_tag="VF061_10445"
     CDS             complement(289..750)
                     /locus_tag="VF061_10445"
                     /inference="COORDINATES: protein motif:HMM:TIGR00738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEX6669970.1"
                     /translation="MLSKKAKYAIKALLALAERDRDEPMRIADLAREEQIPPKFLELI
                     LLGLRNNGILQSRKGKGGGYLLARDPADIYLGQIVRMFDGPLAPVPCASQTAYVRCAD
                     CTNEAVCGVRLAMKEVRDATAKILDGTSIASLHRKVEAAQPAESPIPLVLP"
     gene            complement(766..1950)
                     /locus_tag="VF061_10450"
     CDS             complement(766..1950)
                     /locus_tag="VF061_10450"
                     /inference="COORDINATES: protein motif:HMM:NF013015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669971.1"
                     /translation="MPRTILFVDPPAFCTTVEALVAPALRTRPVAVAPPGAERAVVLA
                     LSTEARRAGITKGMVVRQALKHCPDLVIIPPNPRLYARASRALHEILRVYAPVIEPRG
                     YGHAFLDLTGTGRLFGPPVDAAMRVRREVHERLRFPLSVGVAANKLVSQAAVRADRWS
                     EDGDDEPLVVPFGVEAGFLAPKPLVVMPDLHPRVRGRLDDYQLDLIGEVAAIPERALC
                     AVFGTAGRTLRARALGIDPRPVLPPERRAELTASHILATDTNDLAVLHPLLRMLTERL
                     GRGLRRGNLVARRLRLEIGYADHTESVRAVPLPGSPLDTDLWTAARRAFELAHGKRIA
                     VRGVTVTMEKVEETSGQLELWGVSAGCHPQRALDRIRSRYGTRGVVRASQLAALTAAE
                     GH"
     gene            complement(2019..2645)
                     /locus_tag="VF061_10455"
     CDS             complement(2019..2645)
                     /locus_tag="VF061_10455"
                     /inference="COORDINATES: protein motif:HMM:NF018984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABATE domain-containing protein"
                     /protein_id="HEX6669972.1"
                     /translation="MTHAHAPESELLHVGGDPALDLVNTVDWTARGPENERLDSFEQL
                     LRWADGAGVLDQAALRRLRRLGADRPRAAAAALEDAVRAREVLHDLFGAIARGEAPGS
                     ALRRFNRLLGEATERLEILPSTGAGRGYEWHWRGAESDLRSVVWRVLWAAANLLRSDE
                     LASVRICDGDDCGWMYVDRSRNGLRRWCQMRTCGTREKTRRRRVSGPA"
     gene            2760..3080
                     /locus_tag="VF061_10460"
     CDS             2760..3080
                     /locus_tag="VF061_10460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669973.1"
                     /translation="MIARSWTGATRAEDADAYLDYLHATGFSEYRATPGNRGVLALRR
                     IAGDRAEFRLVTLWDSEEAIRRFAGDDIERAVFYPEDERYLIERGERVEHYEVVYQSE
                     EAVR"
     gene            3077..>3714
                     /locus_tag="VF061_10465"
     CDS             3077..>3714
                     /locus_tag="VF061_10465"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEX6669974.1"
                     /translation="MMVSTRARVVAAFATIYLMWGGTFLAIRYAVADVPPLMTMVLRC
                     AAGAALLFAWLAWRGTLERPSRAQWRTVVVAGALLFLGCHGLLAWAEQRVSSGEAALF
                     MTAIPLWLIALESLLDRRPPSGRVVLALGLGVSGVATLTWGDGWSGGLTDRAVLVVSA
                     LFWAVGTVIVRRGGTPLPAAQSTAMQLGAGALALLIASVAVGEPARWSPAELT"
BASE COUNT          528 a         1261 c         1387 g          538 t
ORIGIN      
        1 cgcggaggag cggggccggg agggggatcg ggtagtcgtg tatgtcgggg tcgacgtgcc
       61 ggtgtatggt catggcccta tataccctat ctgctagatc gagtaaatag gcatgacaca
      121 tgccaattgg gtgaggcaac gcacaattga gccgatatgg cgttggatgt tgcgacgcta
      181 caagggctta taaggtaggg ccgtcagcgg tcagggaccc ccagacggtg gcagactcgc
      241 ggaccagctg tggccgaatg ccacgccggg tgtggcgtcc gtgccagtct agggaaggac
      301 gagcgggatg ggggattcgg ccggctgagc cgcctccacc ttgcggtgga gcgaggcgat
      361 gctggtgccg tcgaggatct tcgcggtggc gtcgcggact tccttcatcg ccagccgcac
      421 gccgcagacc gcctcgttgg tgcaatcggc gcagcgcacg taggcggtct ggctggcaca
      481 ggggaccggg gccagggggc catcgaacat ccggacgatc tggccgaggt agatgtccgc
      541 cggatcgcgg gcgagcagat agccgcctcc cttgcccttc cggctctgga ggatgccgtt
      601 gttccggagc ccgaggagaa tgagctcgag gaacttgggc gggatctgct cctcgcgcgc
      661 gaggtcggcg atgcgcatgg gctcgtcgcg atcccgctcg gccagcgcga gcagcgcctt
      721 gatggcgtac ttggctttct tcgagagcat ggatgccgaa tatagtcagt ggccctcggc
      781 ggcggtgagc gcggcgagct ggctggcgcg gaccacgcct cgggtgccgt agcgggaacg
      841 aatacggtcg agggcgcgct gaggatgaca gccggcactc acgccccata gctccagctg
      901 cccgctcgtc tcctcgacct tctccatcgt caccgtcacc cctcgcaccg cgatccgctt
      961 gccgtgggcc agctcgaagg ctcggcgggc ggcggtccag agatcggtgt cgaggggtga
     1021 gccggggagg gggaccgcgc ggaccgactc ggtgtggtcg gcgtagccga tttccagccg
     1081 caggcggcgg gcgaccaggt taccgcggcg gaggccgcgg cccagtcgtt cggtgagcat
     1141 ccggagcagc ggatgcagca cggccaggtc gttggtgtcg gtggccagga tgtgcgacgc
     1201 cgtgagctcg gcccggcgct ccggcgggag caccgggcgg gggtcgatgc cgagggcgcg
     1261 cgcgcggagg gtgcggccgg cggtaccgaa gacggcgcag agcgcgcgct ccggaatcgc
     1321 cgccacctcg ccgatcagat cgagctgata atcgtccagc cgaccccgca cccgggggtg
     1381 caggtcgggc atgacgacca gcggcttggg cgcgaggaat cccgcctcga cgccgaaggg
     1441 cactaccagc ggttcgtcgt ctccgtcctc cgaccaccga tcggcccgca ccgccgcctg
     1501 gctcaccagc ttgttggccg cgacgccgac cgagagcggg aagcgaagcc gctcgtgcac
     1561 ctcgcgccgc acccgcatgg ccgcgtccac cggcgggccg aacagccgcc cggtgccggt
     1621 gagatcgagg aaggcgtgcc cgtagccgcg tggctcgatg acgggggcgt acacgcgaag
     1681 gatctcgtgc agcgcccgcg aggcgcgggc gtagagtcgg ggattgggcg ggatgatgac
     1741 caggtcgggg cagtgcttca gcgcctggcg caccaccatg cccttcgtga tccccgcgcg
     1801 ccttgcctcg gtggagagcg cgagcaccac cgcccgctcc gcacccggcg gcgccacggc
     1861 gacgggccgg gtacggagcg cgggagcgac cagggcctcg accgtggtgc agaaggcggg
     1921 gggatcgacg aagaggatgg tgcggggcac gaacctggag gcctcggctt cgggttttat
     1981 tcggttgccc cgaatatgcc tccgccccgg agggccggtc aagccggccc gctcacccgt
     2041 cgccgccggg tcttctcccg ggtcccgcag gtgcgcatct gacaccagcg gcggaggcca
     2101 ttccgactcc ggtccacgta catccagccg cagtcgtcgc cgtcgcagat ccgcacgctc
     2161 gccagctcgt ccgagcgcag cagattcgcc gccgcccaca gcacccgcca gaccaccgac
     2221 cggagatcgg attccgcccc acgccagtgc cattcgtagc cgcgccccgc gccggtggag
     2281 ggcaagatct cgagccgctc cgtcgcctcc cccaggagcc ggttgaaccg ccggagtgcg
     2341 gacccggggg cctcgccccg ggcgatcgcg ccgaagaggt cgtgcaggac ctcacgagcc
     2401 cggaccgcgt cctccagcgc ggccgcggcc gcccggggtc ggtcggcccc gagccggcgg
     2461 agccgccgaa gcgcggcctg atcgaggacc cccgcaccgt cggcccagcg gaggagctgc
     2521 tcgaagctgt cgagccgctc gttctcggga ccgcgcgcgg tccagtccac ggtgttgacc
     2581 aggtcgaggg cggggtcgcc gccgacgtgg aggagctcgc tctcgggggc atgggcgtgc
     2641 gtcatggggg aaagatagca ccagtattcg gcccttgaca ggtgcaagac cggaggagca
     2701 cattgcacca gtaacgagcc atatactggc gcagacggcc ggccacccca ggagggcaca
     2761 tgatcgcgcg cagctggacc ggagccaccc gggcggagga cgccgacgcc tacctggact
     2821 acctccacgc caccgggttc tcggaatacc gggccacgcc ggggaatcgg ggtgtgctcg
     2881 cgctccgccg gatcgcggga gaccgcgccg agttccgtct ggtcacgctc tgggactcgg
     2941 aggaggccat ccgccgcttc gccggcgacg acatcgagcg cgccgtcttc tacccggagg
     3001 acgagcgcta tctgatcgag cggggcgagc gggtggagca ctacgaggtg gtctaccagt
     3061 cggaggaggc ggtgcgatga tggtctccac gcgggcgcgg gtcgtcgccg ccttcgccac
     3121 catctacctg atgtggggcg gaaccttcct cgccatccgc tacgcggtgg ccgatgtgcc
     3181 gccgctcatg accatggtgc tccgctgcgc cgcgggcgcg gcgctcctct tcgcctggct
     3241 cgcctggcgg gggacgctgg agcgtccctc gagggcgcag tggcgcacgg tcgtcgtggc
     3301 cggggccttg ctgttcctcg ggtgccacgg gctcctcgcc tgggccgagc agcgggtgtc
     3361 gtccggcgag gcggcgctgt tcatgacggc gatcccgctc tggctcatcg cgctcgagtc
     3421 cctgctggat cgccggccac cgagcggccg ggtcgtgctc gccctggggc tcggcgtgag
     3481 cggagtggcg accctcacct ggggggacgg ctggtccggc gggctcaccg accgggccgt
     3541 gctcgtggtg agcgcgctct tctgggccgt gggcacggtg atcgtccggc gcggcggcac
     3601 gccgctgccc gcggcgcagt ccaccgccat gcagctcggc gccggcgctc tggccctcct
     3661 gatcgccagc gtagcggtgg gagaacccgc gcgctggagc ccggccgagc tcac
//
LOCUS       DASUYN010000535         2176 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_830299, whole genome shotgun sequence.
ACCESSION   DASUYN010000535 DASUYN010000000
VERSION     DASUYN010000535.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2176)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2176)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2176
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_830299"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..756
                     /locus_tag="VF061_10470"
     CDS             <1..756
                     /locus_tag="VF061_10470"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEX6669975.1"
                     /translation="EIAAARFLIGALVAVALASARGSSLAVTDRGGTWRRSIYGTLAA
                     LGSFYALSSPRVAVGDAATLGATAPIFVAALSGPLLAERVGRRLWIAVALAFAGIVLL
                     VRPSFTTAAPVAAVATAGAFFYALAMIWLRRIGPAESHEAVVLHFSLVALLTMLLLAL
                     PTWTWPDARGGLYLLGAGLGGGGAQLAMTRAYSLHRAAPVTALSTLGVVFTWLLALPL
                     FPERPSAGQLAGTLLVLLATVLIGAATARPRYL"
     gene            761..1408
                     /locus_tag="VF061_10475"
     CDS             761..1408
                     /locus_tag="VF061_10475"
                     /inference="COORDINATES: protein motif:HMM:NF012933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase"
                     /protein_id="HEX6669976.1"
                     /translation="MTARPLVTSGLAYDPVLACRHLAEADPTLGALIARVGPYLLRPQ
                     PTQSLFAAVARAIVYQQLSGSAAATILGRVKAIYAPKRFPTPRDILATPPERLRAAGL
                     STAKTAALRDLAQRSLDGTVPTMRRVRVLPDEEVVERLIQVRGVGRWTAEMLLMFRLG
                     RGDVLPVSDLGIRKGFALAFGSRRLPAAITIERRAERWRPYRSVACWYLWRALEQ"
     gene            1420..1881
                     /locus_tag="VF061_10480"
     CDS             1420..1881
                     /locus_tag="VF061_10480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669977.1"
                     /translation="MSETTQRIGGYEPSVRTVEMVCDRLAELGLAVGADTARSLVRDI
                     LAAEGPRIDARLRESLETALQTIKVAAQSAMGLLATTGGGDPKAKEPAAPEQLHVSRR
                     PPAPAPAQPAARKAAPPPPSAEPKRPSGPRRPRPDFEEDERRPVFRRPGRR"
     gene            1881..>2176
                     /locus_tag="VF061_10485"
     CDS             1881..>2176
                     /locus_tag="VF061_10485"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX6669978.1"
                     /translation="MLLHRVWDPKLAQASYLIGCTEAKEALVIDANRDVDQYLALAAT
                     LNLRIAHVTETHIHADFASGSRELAGRAKARLYLSDEGGDGWRYGFAASDGATLL"
BASE COUNT          249 a          849 c          768 g          310 t
ORIGIN      
        1 gagatcgcgg ccgcgcggtt cctgatcggc gcactggtcg ccgtcgcact ggcctcggcg
       61 cgcggtagct ccctcgcggt gaccgaccga gggggtacct ggcgccgcag catctacggc
      121 accctggccg cgctgggctc cttctacgcg ctttcgtccc ccagggtcgc ggtgggcgac
      181 gccgccaccc tgggcgccac cgccccgatc ttcgtggcgg ccctctccgg ccccctgctg
      241 gccgagcgcg tcggccgccg cctctggatc gccgtggccc tggccttcgc gggcatcgtg
      301 cttctggtgc gaccctcgtt caccaccgcc gccccggtcg cggcggtcgc cacggcgggc
      361 gccttcttct acgccctcgc catgatctgg ctccggcgga tcggtcccgc ggagagccac
      421 gaggcggtgg tgctgcactt ctccctcgtg gcgctgctca ccatgctgtt gctggcgctg
      481 ccgacctgga cctggcccga tgcccgcgga gggctctacc tgctcggcgc gggactcggc
      541 ggcggggggg cgcagctcgc catgacccgg gcgtactcgc tgcaccgcgc cgcgccggtg
      601 accgcgctca gcaccctcgg cgtggtattc acctggctgc tcgcgcttcc gctgtttccc
      661 gagcgcccct cggcggggca gctggcgggc accctcctgg tgctcctggc gaccgtgctg
      721 atcggcgcgg ccaccgcacg cccccgttat ctttgagccc atgaccgccc gaccgctcgt
      781 cacttcggga ctggcctatg atccggtcct ggcgtgccgg cacctcgcgg aagccgatcc
      841 cacgctcggc gcgctgatcg cgcgggtggg tccctacctg cttcgccccc agccgaccca
      901 gagcctcttc gccgccgtcg cccgcgccat cgtctatcag cagctctcgg gcagcgccgc
      961 ggccacgatt ctcgggcggg tgaaggcgat ctacgcgccg aagcgctttc ccaccccgcg
     1021 cgacatcctg gccaccccgc cggagcggct ccgcgccgcc ggactctcca ccgccaagac
     1081 cgcggcgctc cgggacctcg cccagcgaag cctggacggg accgtgccga cgatgcgacg
     1141 ggtgcgggtg ctgcccgacg aggaagtggt cgagcgcctg atccaggtcc gcggcgtggg
     1201 acgctggacg gcggagatgc tgctcatgtt ccggctcggc cgcggggacg tgctgccggt
     1261 cagcgacctc ggcatccgca aggggttcgc cctcgccttc ggcagccgcc gtctcccggc
     1321 ggcgatcacc atcgagcgcc gcgcggagcg ctggcgcccc taccgctcgg tcgcgtgctg
     1381 gtacctgtgg cgcgcgctcg agcagtgaag gaggcagcga tgagcgagac gacgcagcgg
     1441 atcggcggct acgagccgag cgtccgcacg gtggagatgg tgtgcgaccg gctggccgag
     1501 ctgggcctgg cggtcggcgc ggacacggcg cggtcgctgg tgcgcgacat actcgcggcc
     1561 gagggcccgc gcatcgacgc gcggctccgg gagtcgctcg agaccgccct gcagacgatc
     1621 aaggtcgcgg cccagtccgc gatgggcctc ctcgccacca ccggcggcgg cgatccgaag
     1681 gcgaaagagc cggcggcgcc cgagcagctc cacgtgtcgc gccgcccgcc cgcgccggcg
     1741 cccgcccagc cggcggcgcg caaggccgcg ccaccgccgc cctcggccga gcccaagcgt
     1801 ccgtcggggc cgcgcaggcc gcggccggac ttcgaggagg atgagcggcg tcccgtgttc
     1861 cggcggccgg ggcgtcgcta gtgctgctcc accgggtgtg ggaccccaag ctcgcgcagg
     1921 cgagctacct gatcgggtgt accgaggcga aggaggcgct ggtcatcgac gccaatcggg
     1981 acgtcgacca gtacctcgcc ctcgccgcca ccctcaacct tcgcatcgcc cacgtcaccg
     2041 agacccacat ccacgccgac ttcgcctccg ggagccgcga gctcgcgggc cgcgccaagg
     2101 cacggctcta tctctccgac gagggcgggg acgggtggcg ctacggcttc gccgcgtcgg
     2161 acggcgcgac gctgct
//
LOCUS       DASUYN010000536         2886 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1936583, whole genome shotgun sequence.
ACCESSION   DASUYN010000536 DASUYN010000000
VERSION     DASUYN010000536.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2886)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2886)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2886
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1936583"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..212
                     /locus_tag="VF061_10490"
     CDS             <1..212
                     /locus_tag="VF061_10490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX6669979.1"
                     /translation="MPELSGRELGTRLAVLRPELPVLYMSGYTGDDVIQRGLLEPGVP
                     FQQKPFTPEGLARKVREMLDRRART"
     gene            complement(209..454)
                     /locus_tag="VF061_10495"
     CDS             complement(209..454)
                     /locus_tag="VF061_10495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669980.1"
                     /translation="MPVQARLRSEHQRKYPELNASKWYEVAPIFPGVTQRMVNMAGER
                     LTRLSTPRGYVILRAEHLEFRPSRDEAAAEPDTEAIA"
     gene            647..1678
                     /locus_tag="VF061_10500"
     CDS             647..1678
                     /locus_tag="VF061_10500"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HEX6669981.1"
                     /translation="MPTSQYAQPVVAGSAKCLVVDDEPGVRGFLVRMLQAQGFQCHEA
                     ATGLEALRVLDQIGEPPLIVSDMRMPEMDGISLLEEVRVRYPDTSVIMLSGVSETNTA
                     VDCLHRGAADFLLKPISMGELQARVGRVLEKRALVLQNRYYHENLERQVREQALRIQE
                     LFLQGVQMLARALEAKDAYTSGHSIRVSQYAVATAQRMGFEGHSLDGIRLGGELHDIG
                     KIGTSESVLHKPTSLTAEEFTQITQHPLLGEKMLSPLAQESPDVLRIVRSHHERLDGR
                     GFPDGLRGEKIPIEARIVAVADAFDAMTTRRPYRESRPPEDALAELRRVAGSQLDPEA
                     VEAFVAAYD"
     gene            complement(1685..>2886)
                     /locus_tag="VF061_10505"
     CDS             complement(1685..>2886)
                     /locus_tag="VF061_10505"
                     /inference="COORDINATES: protein motif:HMM:NF024909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HEX6669982.1"
                     /translation="LALFLADAAAAPAARALEVQREAPVAFSVGRSFVVRYRWRHRLG
                     RRLVVQVKERLPDPLGGAITPLRRLELPPGLEVEERLELRPVRRGIGTGGTMDLRVLG
                     PLGLAWRQSRIEAPWTATVYPSLRGTSLRALPVQALRRREAGLRSVRYRGEGRLFEGL
                     REWVPGDDTRIIDWKATARRGKPIARQYEDERRQQVMLLVDAGRLLTAEVEGTPRLEA
                     VISAALHLAYAAVEHDDDVGLLVFADTIQRYVSPARGRRALRAVLEGLAAAEGRLVES
                     DYPAALRYLALHSRKRALTVLFTDVIDRTASEALVAQAATLRPRHLPLAVTLRDPAME
                     ALAAMRPANQSQAFQRAAAEELLGAREAALADMRSRGVMVLDVLPGAASTALVERYHL
                     LKRKGAL"
BASE COUNT          416 a         1069 c         1004 g          397 t
ORIGIN      
        1 tgatgccgga gctgagcggg cgcgagctgg gcacccgcct ggcggtgctg cggcccgagc
       61 tgcccgtgct ctacatgtca ggctacaccg gggacgacgt gatccagcgt gggctgctcg
      121 aacccggggt ccctttccag cagaagcctt tcacgccgga aggtctggcg cggaaggtcc
      181 gcgagatgct cgaccgacga gcccggacct aggcgatcgc ctcggtatcg ggctccgccg
      241 cggcctcgtc gcgtgatggc cggaactcga gatgctcggc gcgcaggatc acgtagccgc
      301 ggggggtgct cagccgggtc aaccgctccc cggccatgtt gaccatccgc tgggtgacgc
      361 cgggaaagat cggcgccacc tcgtaccact tggacgcgtt gagttcgggg tacttgcgct
      421 ggtgctcgga tcgcagacgc gcctgcacgg gcatcgtcgc tccttcgccg gcactgccgc
      481 cggccgacgg gttttaccgg tccgcgaggg tggagacaat ctaacgagcc gcccctcccc
      541 ggggcagcgg gccccccagt gctggacttt tcacccggga ttacttacag tgtaaccgat
      601 tggatgttcg tggcatccat cgcccacctc aagtacactg tgaaccatgc cgacctccca
      661 gtacgcgcag ccggtcgtgg ccggctccgc caagtgtctc gtcgtggacg acgagcccgg
      721 ggtacgcggg ttcctcgtcc gcatgctgca ggcgcagggc ttccagtgcc atgaggcggc
      781 caccggcctg gaggcgctcc gcgtcctcga tcagatcggc gagccgccgc tgatcgtctc
      841 cgacatgcgg atgccggaga tggacgggat cagcctgctc gaggaagtgc gggtccggta
      901 tcccgacacc tcggtcatca tgctgagcgg tgtgagcgag accaataccg cggtggactg
      961 cctccatcgc ggcgcggcgg acttcctgct caagccgatc tcgatgggcg agctgcaggc
     1021 ccgggtgggg cgcgtgctgg agaagcgcgc gctggtgctc cagaaccgct attaccacga
     1081 gaacctggag cggcaggtcc gggagcaggc cctccgcatc caggagctct tcctccaggg
     1141 cgtccagatg ctcgcccggg ccctcgaggc gaaggacgcc tacaccagcg gtcactccat
     1201 ccgggtcagc cagtatgccg tcgccaccgc gcagcgcatg ggcttcgagg gccactcgct
     1261 ggacggcatc cggctcgggg gtgagctgca cgacatcggg aagatcggca ccagcgagtc
     1321 ggtgctgcac aagccgacct cgctcaccgc cgaagagttc actcagatca cccagcaccc
     1381 gctgttgggc gagaagatgc tctccccgct cgcgcaggag tcgcccgacg tgctccgcat
     1441 cgtgcgctcg caccacgagc ggctcgacgg ccgcggattt ccggacgggc tgcgcggcga
     1501 gaagatcccg atcgaggccc gcatcgtcgc ggtggccgac gccttcgacg ccatgaccac
     1561 gcggcggccg taccgcgagt cgcggccgcc ggaggacgcg ctcgcggagc tgcgccgggt
     1621 cgccggctcg cagctcgatc ccgaggcggt ggaggcgttc gtcgccgcgt acgactgagc
     1681 cggctcacag cgcccccttc cgcttgagca ggtggtaccg ctccaccagc gccgtactcg
     1741 cggcgccggg cagcacgtcc agcaccatca ccccccgcga ccgcatgtcc gccagcgccg
     1801 cctcccgcgc gccgagcagc tcctcggcgg cggcgcgctg gaacgcctgc gactgattgg
     1861 cgggccgcat cgcggcgagc gcctccatcg cggggtcccg cagcgtcacc gccaacggta
     1921 gatgccgcgg ccgcagggtg gcggcctgcg ccaccagggc ttcgctcgcg gtccggtcga
     1981 tcacgtcggt gaagagcacc gtgagggcgc gctttcggct gtgcagcgcc aggtaccgga
     2041 gcgcggcggg ataatcggac tcgaccagcc ggccctccgc ggccgcgagg ccctcgagca
     2101 ccgcgcggag cgcgcggcgg ccccgcgccg gcgacacgta gcgctggatg gtgtcggcga
     2161 agaccaggag gccgacgtcg tcgtcgtgct ccaccgcggc gtacgccagg tgaagggcgg
     2221 ccgagatcac cgcctccagc cgcggcgtcc cctccacctc cgccgtgagc aggcggccgg
     2281 cgtccaccag caacatcacc tgctgccgcc gctcgtcctc gtactggcgg gcgatcggct
     2341 tgccccgccg cgccgtggcc ttccagtcga tgatcctggt gtcgtccccg ggcacccact
     2401 cgcgcaagcc ctcgaacagc cggccctcgc cgcggtaccg cacgctccgg agccccgcct
     2461 cccgccgccg cagggcctgc accgggagcg cgcgcagcga ggtgccgcgc aggctgggat
     2521 agaccgtcgc cgtccaaggc gcctcgatcc ggctctgccg ccaggcgagg ccgagcggac
     2581 cgagcacccg gagatccatg gtaccgccgg tcccgatacc gcggcgaacg ggccgcagct
     2641 ccagccgctc ctcgacctcg aggcccggcg gcagctccag gcggcgcagc ggggtgatcg
     2701 cgccccccag cgggtccggc aggcgttcct tgacctggac caccagccgg cggccgaggc
     2761 ggtgtcgcca gcggtaccgg accacgaagc tgcgtccgac ggagaaggcg accggcgcct
     2821 cgcgctgcac ctcgagcgcc cgcgcggcag gggccgccgc cgcgtccgcc aggaacaggg
     2881 ccagcc
//
LOCUS       DASUYN010000537         2804 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1936976, whole genome shotgun sequence.
ACCESSION   DASUYN010000537 DASUYN010000000
VERSION     DASUYN010000537.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2804)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2804)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2804
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1936976"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..419)
                     /locus_tag="VF061_10510"
     CDS             complement(<1..419)
                     /locus_tag="VF061_10510"
                     /inference="COORDINATES: protein motif:HMM:NF014724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HEX6669983.1"
                     /translation="MSRRRSLGPIVGMVLFLAAAVYTVALTAVLVASQHDQRRPVDAI
                     VVLGAAQYNGRPSPVLRARLDHALVLYREGYAPLIVVTGGVGRRDTISEATVGRRYLM
                     AREVPGDDVVAQPVGRSTRTSMTAVGDWLRQRDLRRVL"
     gene            complement(425..1810)
                     /locus_tag="VF061_10515"
     CDS             complement(425..1810)
                     /locus_tag="VF061_10515"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX6669984.1"
                     /translation="MIRLSFYGGAGQVTGSMHLLEAAGGRFLLDAGLFQGRRAEARER
                     NLQLPFDPRRLDGVVLSHAHIDHSGRLPLLVRNGFHGPIHATPATRDLCAVMLPDAAH
                     IQEKDFEFLQRRDKAGVQSEPLYSLADAVATQDLMVGVPYRRITHLRKHLALEFLDAG
                     HILGSATVDIRITEAGSHRLVFSGDIGRSGLPIIRDPDPPSGPVDTLIIEATYADRTH
                     ESVEDAERRLGEAVRRVAARGGKVLVPSFALGRTQELVYSLHQLWRAGKVPEIPIYVD
                     SPLAVDVTTVFRLHSDVFDHRERMVAAESRLFDFPLVRYVRTVDESKALDSSPGPMVI
                     VAASGMAESGRILHHLAHGIGDHRNLVLFVGFQAEHTLGRRIKEGANPIRVFGDELPV
                     RAEVESIDGYSAHADRKELLAWVRRLGGPIRRAFVVHGEPPALEAMAQALREAGVRDV
                     RVPRQGESFDL"
     gene            complement(1818..2462)
                     /gene="upp"
                     /locus_tag="VF061_10520"
     CDS             complement(1818..2462)
                     /gene="upp"
                     /locus_tag="VF061_10520"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004845 - uracil phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HEX6669985.1"
                     /translation="MPPASFPNLTVLTHPLIAHKLSILRDRDTSTRDFKQLVGEIATL
                     MAYEVTKDLPTEPVEIETPLERMTGQQVSGKKLTLVPILRAGLGMVEGIAQLIPSARV
                     GHIGLYRDHDTLKPVDYYFKIPASEVERDFFVLDPMLATGGSAVAAVSALREAGARRV
                     KFLCLVAAPEGVARMLEAHPDVPIFTAALDRQLNEHGYILPGLGDAGDRLFGTR"
     gene            2583..>2804
                     /locus_tag="VF061_10525"
     CDS             2583..>2804
                     /locus_tag="VF061_10525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669986.1"
                     /translation="MRSTHTVMRGVTILAWLTMVLLVTECHAQSATGPAQRSPQPKPI
                     KGVVTAEPVATGLEHPWALAFLPDGRILVT"
BASE COUNT          420 a          972 c         1025 g          387 t
ORIGIN      
        1 agcacccgcc ggaggtcccg ctgccgcagc cagtcgccta ccgcggtcat ggacgtgcgg
       61 gtggagcgcc cgaccggctg ggccaccacg tcgtccccgg ggacctcccg cgccatcagg
      121 tagcggcggc cgacggtcgc ctcgctgatg gtgtcccgcc ggccgacccc gccggtcacc
      181 acaatcagcg gtgcgtagcc ctcgcggtag agcaccagcg cgtggtccag ccgcgcccgc
      241 agcaccggcg aggggcgccc attgtactgg gccgcgccca gcacgacgat cgcatccacg
      301 ggccggcgct ggtcgtgctg gctggccacc aggaccgccg tgagcgcgac ggtgtagacg
      361 gccgccgcca ggaacagcac catgcccacg atggggccca gcgagcggcg gcgcgacacg
      421 ggggctacag gtcgaagctc tcgccctgtc ggggaacgcg cacgtcccgt acccccgcct
      481 ctcggagcgc ctgcgccatc gcctcgagcg cggggggctc gccgtgtacc acgaaggcgc
      541 ggcggatcgg gccgccgagg cgccgcaccc aggcgagcag ctccttccgg tccgcgtggg
      601 ccgagtagcc gtcgatgctc tctacctccg cccggaccgg gagctcgtcc ccgaagaccc
      661 ggatcggatt ggcgccctcc ttgatccgcc ggcccagggt gtgctcggcc tggaagccga
      721 cgaagagcac caggttgcgg tggtcgccga tgccgtgggc gaggtggtga aggatgcgcc
      781 ccgactcggc catccccgag gcggccacga tcaccatggg gccgggcgag gagtcgaggg
      841 ccttggactc gtccacggtg cggacgtagc gaaccagggg gaagtcgaac aggcggctct
      901 ccgccgccac catccgctcg cggtggtcga agacgtcgga gtgcaggcgg aacacggtgg
      961 tgacgtccac ggcgagcgga ctgtccacgt agatcgggat ctccgggacc ttcccggcgc
     1021 gccagagctg gtggaggctg tagaccagct cctgggtgcg gccgagggcg aacgacggca
     1081 ccagcacctt gccgccgcgc gccgccaccc gccgcaccgc ctcgcccagc cgccgctccg
     1141 cgtcctccac cgactcgtgg gtccggtcgg cgtaggtcgc ctcgatgatg agggtgtcca
     1201 ccggcccgct ggggggatcg gggtcccgga tgatggggag cccgctccgg ccgatgtcgc
     1261 cggagaacac caggcggtgg cttccggcct cggtgatccg gatatccacc gtggcggagc
     1321 cgaggatgtg ccccgcgtcg aggaactcga gcgcgagatg tttccggagg tgggtgatcc
     1381 tccggtacgg cacgccgacc atcaaatcct gggtggccac cgcgtcggcc agcgagtaga
     1441 ggggctcgct ctgcactccc gccttgtccc ggcgctggag gaactcgaaa tccttctcct
     1501 ggatgtgcgc cgcgtccggc agcatcaccg cacagaggtc gcgggtggcg ggggtggcgt
     1561 ggatcgggcc gtgaaagccg ttccgcacca gcagcggcag gcgcccggaa tgatcgatgt
     1621 gcgcgtggct caacaccacg ccgtcgagac ggcgggggtc gaacggcagc tgcaggttcc
     1681 gctcccgggc ctcggcccgc cggccctgga acagtccggc atcgagcagg aaccgcccgc
     1741 ccgccgcctc gagcaggtgc atggagccgg tgacctgacc ggcgccgccg tagaaggaga
     1801 gtcggatcac gcgcgcctca cctggtgccg aacaaccggt cgccggcgtc accgaggccg
     1861 gggaggatgt agccgtgctc gttgagctgc cggtcgagcg cggcggtgaa gatcgggacg
     1921 tcggggtggg cctcgagcat ccgggccacg ccctccgggg cggcgacgag gcagaggaac
     1981 ttgacgcgcc gcgccccggc ctcgcgcagg gcggagaccg cggccaccgc ggagccgccg
     2041 gtggcgagca tcgggtccag cacgaagaaa tcgcgctcca cttcggaggc ggggatcttg
     2101 aagtagtagt ccaccggctt gagggtatcg tggtcgcggt agagcccgat gtggccgacc
     2161 cgggcggacg ggatcagttg ggcgatcccc tccaccatgc cgagccccgc gcgcaggata
     2221 ggcaccaggg tgagcttctt gcccgagacc tgctggccgg tcatccgctc cagtggagtc
     2281 tcgatctcca ccggctcggt gggaaggtcc ttggtgacct cgtacgccat cagggtggcg
     2341 atctcaccga ccagctgctt gaagtcgcgg gtgctggtgt cccggtcccg gaggatcgag
     2401 agcttgtggg cgatgagcgg gtgggtaagg acggtcaggt tgggaaagga tgccgggggc
     2461 atgggtccaa tatgcgggag ggcatccctc cgcagtaggg gagcggcgcg ccccggcctt
     2521 gccttgcgtg cgaggagcgg tgacactcca cgctggaatt cgtccagcac aaggagccca
     2581 gcatgcgttc cacccataca gtcatgcgcg gcgtgaccat tctcgcgtgg ctcacgatgg
     2641 ttctgctcgt caccgagtgc cacgcgcaga gcgcgaccgg tcccgcccaa cgctccccgc
     2701 agccgaagcc gatcaagggc gtggtcaccg ccgagcccgt cgcgaccggc ctggagcacc
     2761 cctgggcgct ggccttcctc ccggacgggc gaatcctggt gacc
//
LOCUS       DASUYN010000538         2411 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1055223, whole genome shotgun sequence.
ACCESSION   DASUYN010000538 DASUYN010000000
VERSION     DASUYN010000538.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2411)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2411)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2411
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1055223"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..546
                     /locus_tag="VF061_10530"
     CDS             <1..546
                     /locus_tag="VF061_10530"
                     /inference="COORDINATES: protein motif:HMM:NF014389.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HEX6669987.1"
                     /translation="RTVVVVALAYASIVALTHWAVRQRKIGPFGAWPRLVRRVSDPVL
                     LPLERRVMRSGGSPQDAPLWLLGIVIVGGLVLLSLLHWVIGMGGTLAAVASSGPRGWV
                     RFLVSAAFSLVMACILIRVIASWLGISPYRSWMRPVVALTDWIVEPIRRLLPPMGMID
                     FSPMVAWLVLWVARGLVMGLL"
     gene            573..872
                     /locus_tag="VF061_10535"
     CDS             573..872
                     /locus_tag="VF061_10535"
                     /inference="COORDINATES: protein motif:HMM:NF014633.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF167 domain-containing protein"
                     /protein_id="HEX6669988.1"
                     /translation="MRLRVQPRASRTEVAGVLGDHLRVRLTAPPVDGAANEALVRFLA
                     ERLGVPRSAVRLVSGEAGRSKVVAVDGIGVSETRARLLPSLAGQSATPCRRRPFT"
     regulatory      893..963
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00521"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="SAM riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00521"
     gene            1000..>2411
                     /locus_tag="VF061_10540"
     CDS             1000..>2411
                     /locus_tag="VF061_10540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase family protein"
                     /protein_id="HEX6669989.1"
                     /translation="MPPTALAPATRTRAERLALLGPLLARRILVLDGAMGTMIQTYGL
                     GERDYRGERFADWPSDLRGHNDLLTLTQPGVIRAIHAAYLEAGADIIETNSFNSTSVS
                     LSDYGMEGMVYELNVAAARLAREAADQFEVREPDAARFVAGVLGPTNRTASISPAVND
                     PAARNVTFDELAATYQEAARGLVDGGADLLMIETIFDTLNAKAAIFAVESLFETLGFR
                     LPVMISGTITDASGRTLSGQVTEAFWNSVAHARPLSIGLNCALGAAALRPYVQELSRV
                     APVLVSTHPNAGLPNEFGGYDESPEYMAGVLREFAEHGLVNLVGGCCGTTPAHIEAIA
                     DAVRDLPPRRPAAPPPRCRLSGLEPLTIGPETLFVNVGERTNVTGSRKFARLVLGGDY
                     EAGLEIARQQVENGAQLIDVNMDEGMLDSEHAMTTFLKLLASEPAISRVPVVIDSSRW
                     SVLEAGLKCVQGKSVVNSISL"
BASE COUNT          320 a          878 c          832 g          381 t
ORIGIN      
        1 cgcaccgtcg tcgtcgtcgc actggcctac gcctcgatcg tggcgctcac ccattgggcg
       61 gtgcgtcagc ggaagatcgg cccgttcggc gcctggcccc gcctggtgcg ccgggtcagc
      121 gacccggtgc tcctgccgct cgagcgccgg gtgatgcgct ccggcgggag tccgcaggac
      181 gcgccgctct ggctcctcgg gatcgtcatc gtgggcgggc tggtactcct gagcctgctg
      241 cactgggtga tcggcatggg cggcaccctc gccgccgtgg cttcttcggg cccgcgcggc
      301 tgggtgcgtt tcctggtgag cgcggccttc agcctggtaa tggcgtgcat cctgatccgg
      361 gtgatcgcct cctggctcgg catctccccc tatcgctcct ggatgcggcc ggtcgtggcg
      421 ctcaccgact ggatcgtcga gccgatccgc cggctgctgc ccccgatggg gatgatcgac
      481 ttcagcccca tggtggcctg gctggtcctc tgggtcgcac ggggcctagt gatgggcctc
      541 ctctgatcga ggcgaccggc acgggcgtcc gcctgcgact gcgggtgcag ccgcgcgcgt
      601 cccgcaccga ggtggccggg gtgctcggcg atcacttgcg ggtccggctc acggccccgc
      661 cggtggacgg cgcggccaac gaggcgctgg tccggtttct cgccgagcgg ctgggggtgc
      721 cccggagcgc ggtgcggctg gtgagcgggg aggccggacg cagcaaggtg gtcgcggtgg
      781 acggaatcgg cgtgtccgag acccgagccc gcctgctgcc gtcgttggca ggccagtccg
      841 ccaccccttg ccgcaggcgg ccattcacct agctttaagg cggcagcacg acaatcgatt
      901 ccgtggcgat ttgcgctgat tgcggccacg ttaaacaagc agctaaaacg cataccctga
      961 ggcgttttgg ccccagggct ttttcgtatg gaggacctcg tgccccccac agcactcgcc
     1021 cccgccaccc gcacccgggc ggagcgcctc gcgctcctcg ggccgctcct ggcccgtcgc
     1081 atcctggtgc tcgacggcgc catgggcacc atgatccaga cctacggcct gggagagcgc
     1141 gactaccggg gcgagcgctt cgccgactgg cccagcgatc tgcgggggca caacgacctg
     1201 ctcaccctga cccagcccgg tgtgatccgc gccatccacg cggcctacct cgaggccggc
     1261 gccgatatca tcgagaccaa ctcgttcaac tccacctccg tctcgctcag cgactacggg
     1321 atggagggga tggtctacga gctcaacgtg gcggcggcgc ggctggcgcg cgaggcggcc
     1381 gaccagttcg aggtccggga gcccgacgcc gcgcgcttcg tggccggcgt cctgggcccc
     1441 accaaccgca cggcctcgat ctcccccgcg gtcaacgacc ccgccgcccg gaacgtgacg
     1501 ttcgacgagc tggcggccac ctaccaggaa gccgcccgcg gcctggtgga cggcggggcc
     1561 gatctgctga tgatcgagac catcttcgac acgctgaacg ccaaggcggc gatcttcgcg
     1621 gtcgagtcgc tgttcgagac cctgggcttc cggctcccgg tgatgatctc cggcaccatc
     1681 accgacgcgt cgggccggac cctttcgggc caggtcaccg aggcgttctg gaactcggta
     1741 gcccacgccc gcccgctcag catcgggctc aactgcgccc tcggcgccgc cgcgctccgg
     1801 ccctacgtgc aggagctgtc gcgggtggca ccggtgctgg tgagcaccca tcccaatgcc
     1861 gggctgccga acgagttcgg cggctacgac gagtcgccgg agtacatggc cggtgtgctg
     1921 cgcgagttcg ccgagcacgg cctggtgaac ctggtgggcg gctgctgcgg gacgacaccc
     1981 gcccacatcg aggccatcgc cgacgcggtg cgcgacctcc cgccccgccg tcccgccgcc
     2041 ccgccgcccc gctgccgcct gagcggcctc gagccgctca ccatcggccc cgagacgctc
     2101 ttcgtgaacg tgggcgagcg caccaacgtc accgggtcgc gcaagttcgc ccgcctggtc
     2161 ctcggcggcg actacgaggc cgggctcgag atcgcgcggc agcaggtgga gaacggcgcc
     2221 cagctgatcg acgtcaacat ggacgagggg atgctcgact ccgagcacgc catgacgacg
     2281 ttcctcaagc tgctcgcctc cgagccagcc atcagccggg tgccggtcgt gatcgactcg
     2341 tcccggtggt cggtcctcga agcgggactc aagtgcgtgc aggggaagag cgtggtcaac
     2401 tcgatcagcc t
//
LOCUS       DASUYN010000539         2196 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_171533, whole genome shotgun sequence.
ACCESSION   DASUYN010000539 DASUYN010000000
VERSION     DASUYN010000539.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2196)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2196)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2196
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_171533"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1271)
                     /locus_tag="VF061_10545"
     CDS             complement(<1..1271)
                     /locus_tag="VF061_10545"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HEX6669990.1"
                     /translation="MATSKRPASLLIRLDPRQHGGLQRQIYASVQRAILDGVVGPGTR
                     LPSSRALADDLGVSRTTTLLAVQQLQTEGYLTGRRGSGIFVADELPDDLLRRRTARPP
                     ARLRHPTLSRRGVVLVAAPQGARRLPGPPRAFRIGTPGVDLFPVALWWRLTSRRLRAI
                     TPTQLDYGEPAGLRALREAIAGHVQTARGTRFSADQVLIVAGAQQGLELISRVLLDPG
                     DRVWMEEPGYPGARTALLGAGARIVPVPVDAEGLAVETGARGAGDARLAYVTPSHQYP
                     LGVPMSLPRRLALLRWASRAGAWVIEDDYDSEFRYGARPVPCLHGLDVDGRVIYVGSF
                     SKTLFPALRLGFLVVPPDLQDGLQAARAAADQHPPVLDQAVLADFIVEGHFARHLRRM
                     RVAYRERLEALTAAVDRVCRGALRVRPVRTGL"
     gene            1391..2095
                     /locus_tag="VF061_10550"
     CDS             1391..2095
                     /locus_tag="VF061_10550"
                     /inference="COORDINATES: protein motif:HMM:NF019590.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NIPSNAP family protein"
                     /protein_id="HEX6669991.1"
                     /translation="MEDCCCPVVELRQYTLRPMTRETLIGVFDEHFVEGQERCGMRVI
                     GQFRDLDDPDRFVWLRGFADMEARTRALEAFYGGPVWKEHGPAANATMVDHTNVLLLK
                     PADATAGFAFDPRGRPAPGGPVIAGGVVIATIDHLNGPPSAEAVAVPGDAGEPTILAR
                     LVTERARNGFPRLPVREDANVLVTFLSHPTADAYRPSPIIPPRVHRRELLRLQPTPRS
                     LLRHPLPPRPSGEKAG"
BASE COUNT          311 a          828 c          792 g          265 t
ORIGIN      
        1 agacccgtgc ggacagggcg cacccgcagg gcgccgcggc acactcggtc caccgccgcc
       61 gtcagggcct ccaggcgctc gcggtaggcc acccgcatcc ggcgcagatg gcgcgcgaag
      121 tgtccctcca cgatgaagtc ggcgagcacc gcttggtcga gcaccggcgg gtgctgatca
      181 gcggcggcgc gggcggcctg gagcccgtcc tgcaggtccg ggggaacaac gaggaagccc
      241 agccggagcg ccgggaacag ggtcttgctg aagctgccga cgtagatcac gcggccgtcc
      301 acgtcgagcc cgtgcaggca cggcaccggg cgggcaccgt agcggaactc gctgtcgtag
      361 tcgtcctcga tcacccacgc gccggcgcgg ctcgcccacc ggagcagcgc cagccgccgc
      421 ggcaggctca tcggcacccc gagcggatac tggtgcgacg gcgtcacgta cgccagacgc
      481 gcgtcgcccg cgccacgggc ccccgtctcg accgccaggc cctcggcgtc caccggcacc
      541 gggacgatgc gcgcacccgc cccgagcagc gcggtgcgcg cccccgggta acccggctcc
      601 tccatccaga cgcgatcccc gggatcgagc agcacgcggc tgatcagctc gaggccttgc
      661 tgggcaccag ccacgatcag gacctggtcg gcgctgaagc gggtgccccg cgcggtctgc
      721 acgtggccag cgatcgcctc gcgcagggcg cgcagccccg ccggctcgcc gtagtcgagc
      781 tgggtcggcg tgatcgcgcg cagccgccgg ctcgtgagcc gccaccagag cgccaccggg
      841 aacagatcca cgccgggcgt cccgatgcgg aaagcgcgcg gcgggccggg gagacgccgg
      901 gcgccctggg gcgctgccac cagcacgacc ccgcgccgcg acagggtcgg gtgccggagg
      961 cgggcgggcg gccgcgccgt ccgccggcgc aggagatcgt cgggcagctc gtcggccacg
     1021 aagatgccgg agccccggcg gccggtgaga tacccctcgg tctggagctg ctgcacggcg
     1081 agcagcgtgg tggtccggga caccccgaga tcgtcggcga gggcgcggga ggagggcagg
     1141 cgcgtccccg gcccgacgac gccgtccagg atcgcccgct gaacgctcgc gtagatctgc
     1201 cgctgcagcc cgccgtgctg gcgtggatcg aggcggatca ggaggctggc cggccgcttc
     1261 gaggtggcca tacgtgtgtg cctcttcgtg gctctccgca tgataccagc cgggcagccc
     1321 ccgagtggcc ctatgccttc ccgcgaaagt ggctcttcac tcgcgccggg accaggtcga
     1381 cactgcggcc atggaagact gctgctgccc ggtcgtcgag ctccgccagt acacgttgcg
     1441 cccgatgacg cgcgagacgc tgatcggcgt gttcgacgag cacttcgtcg agggccagga
     1501 gcgctgcggc atgcgcgtca tcggacagtt ccgcgatctc gacgatccgg accgcttcgt
     1561 ctggctccgc ggcttcgcgg acatggaagc ccggacgcgg gcgctcgagg ccttctacgg
     1621 gggtccggtg tggaaggagc acggccccgc cgccaacgcc acgatggtgg accacaccaa
     1681 cgtgctcctg ctgaagccgg cggacgcgac ggccggcttc gctttcgatc cgcggggccg
     1741 gcccgcgcca ggaggcccgg tgatcgcggg cggcgtcgtg atcgcgacga tcgaccatct
     1801 gaacgggccg ccgtcggccg aggccgtcgc ggtacccggc gacgcgggcg agccgaccat
     1861 cctggcccgg ctcgtcacgg agcgggcgcg aaacgggttc ccccggctcc cggtccggga
     1921 ggacgcgaac gtcctcgtga cgttcctctc ccaccccacc gccgacgcgt accggccctc
     1981 gccgatcatc ccgccccgcg tccatcgccg cgagctcctg cgcctgcaac cgacaccccg
     2041 ctccttactc cgccacccac tcccccctcg cccctcgggg gagaaggccg ggtgaggggc
     2101 accgccatgc cggcgccgct atgggagatg aagccggggc tcccgttcac gccctggtgg
     2161 tgagcaggag gaagacatga accggacgcc cgaccg
//
LOCUS       DASUYN010000540         2391 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_613716, whole genome shotgun sequence.
ACCESSION   DASUYN010000540 DASUYN010000000
VERSION     DASUYN010000540.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2391)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2391)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2391
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_613716"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..928)
                     /locus_tag="VF061_10555"
     CDS             complement(<1..928)
                     /locus_tag="VF061_10555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669992.1"
                     /translation="MQIRREAARSSADLGGLLDGLARRAEPLLRGPVDPPDLKAQLTA
                     DGGICAADGSPLMFDPWSPHSHRCGSCGKAHTGSRHDRAWARWQHLWLAERAAELAAL
                     AAVGEREDAARAAAGLLAGYAARYHDLPNRDNVLGPGRLFFSTYLESIWITNYLGAAW
                     LLREAGRLDPSVEEGVNAVADEAANLIGEFDEGFSNRQTWHNAALAAIAVWFEDEELA
                     GRVVEGPTGILAHLVRGFGDDGMWYEGENYHLFALRGQLIAMGWVRQAGVDVLADRRL
                     AARLEGALRAPALTALPDFTFPARKDSRFGVSL"
     gene            complement(940..1932)
                     /locus_tag="VF061_10560"
     CDS             complement(940..1932)
                     /locus_tag="VF061_10560"
                     /inference="COORDINATES: protein motif:HMM:NF020133.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669993.1"
                     /translation="MTAFGAAAPVRLDLAGGWTDVPPYSAREGGVVVAAAVQLYAYAE
                     VRPRDRGYLLTSKDLDHAQEYDGLDALAGEGPLPLLRAGLRLFRAGPCALITRSDAPP
                     GSGLGSSGAIDVALVAALAAASGREPPTREIADLACRLEGQEAAIPGGRQDQFTAAFG
                     GFLRLGFRDPEAVVESIPLDPAFAAELERRMLLCYTGASRFSGDTIGRVMRAYERGEA
                     AIAGALDGLREAAVAMDDALRAGDFSRIGSLLSENWRLQQRLDAGMSTPAMRRLEAAM
                     QDAGCLGGKAAGSGAGGSMFFLGPDDPGPARDAAARLGMRLLPVRWASSGVRPC"
     gene            complement(1929..>2391)
                     /locus_tag="VF061_10565"
     CDS             complement(1929..>2391)
                     /locus_tag="VF061_10565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6669994.1"
                     /translation="PGYLPVPEPPASASPAVAGQAPRFELLTVGSGEAALEQMLQSRL
                     AAAGFDVVIRQLELSTFLARVYGPERDFDAAVLGISGDLGLGYLASLAETAGLPAPDD
                     PAAAQRFFADSVPVAFLYHAAGLQGANRRVQGVEMDLRGELPSVQQWWVAP"
BASE COUNT          356 a          923 c          831 g          281 t
ORIGIN      
        1 ccagggagac cccgaaccgc gagtccttgc gggcggggaa ggtgaagtcg ggaagagccg
       61 tgagcgccgg cgcgcggagc gccccctcca gcctcgccgc gagccgtcgg tccgccagca
      121 cgtccacgcc cgcctgacgg acccacccca tcgcgatcag ctgccccctc agcgcgaaca
      181 ggtggtagtt ctcgccctcg taccacatcc catcgtcccc gaagccgcgt accaggtggg
      241 cgaggatgcc cgtgggtccc tcgaccacgc gtcccgccag ctcctcgtcc tcgaaccaga
      301 cggcgatcgc tgccagcgcc gcgttgtgcc acgtctgccg gttggagaat ccctcgtcga
      361 actcgccgat gaggttcgcc gcctcgtcgg ccacggcatt caccccctcc tcgacggatg
      421 ggtcgagtct tccggcctcc cgcaggagcc acgcggcgcc gaggtagttc gtaatccaga
      481 tggactcgag ataggtggag aagaacaggc ggccggggcc gaggacgttg tcacggttgg
      541 ggaggtcgtg gtagcgcgcc gcgtagcccg cgagcagccc ggcggccgcg cgggcggcgt
      601 cttcgcgctc tcccaccgcc gcgagcgcgg ccagctccgc ggcacgctcc gccagccaga
      661 ggtgctgcca gcgggcccag gcccggtcgt ggcgcgagcc ggtgtgcgcc ttgccgcagg
      721 agccgcagcg atgggagtgc gggctccagg ggtcgaacat caggggcgac ccatccgcgg
      781 cgcagatccc gccgtccgcg gtgagctgcg ccttgagatc gggagggtcc accggccccc
      841 ggagcagcgg ctcggctcgc cgggcaagac cgtcgagcag tccgccgaga tcggcggacg
      901 accgcgccgc ctcacgccgg atctgcaact gatccgcgct caacacggcc gcaccccact
      961 gctcgcccag cgcaccggga ggaggcgcat gccgagccgc gccgccgcat cgcgcgcggg
     1021 cccgggatcg tccggtccga ggaagaacat ggacccgccc gcgcccgacc ccgcggcctt
     1081 gccgcccagg cagccggcgt cctgcatcgc ggcttccagc cgccgcatcg ccggcgtgga
     1141 catgccggcg tccagtcgct gctggaggcg ccagttctcg ctcaacagcg agccgatccg
     1201 gctgaagtcg ccggcgcgaa gcgcgtcgtc catcgccacg gccgcctcgc gaaggccatc
     1261 gagcgctccg gcgatggcgg cctcaccccg ttcgtaggcg cgcatcacgc ggccgatcgt
     1321 gtcgcccgag aaccgggagg ccccggtgta gcagagcagc atccgccgct ccagctcggc
     1381 cgcgaaggcc gggtccagcg gaatggattc caccacggcc tccgggtcgc gaaagccgag
     1441 tcggagaaat cctccgaagg ccgccgtgaa ctggtcctgc cggccgccgg ggatggccgc
     1501 ctcctggccc tccagccggc aggcgagatc ggcgatctcg cgcgtggggg gctcccgccc
     1561 cgacgccgcg gcgagggccg cgaccagcgc gacgtcgatc gcgcccgagc taccgagccc
     1621 actgccggga ggcgcgtccg accgggtgat gagggcgcag ggccccgcac gaaacagcct
     1681 cagcccggcg cgcagcagcg ggagcggccc ctcgcccgcg agcgcgtcga gcccgtcgta
     1741 ctcctgggcg tggtcgaggt ccttggacgt cagcagataa ccccggtctc gtggccgtac
     1801 ctcggcatag gcgtagagct gcaccgccgc cgccaccacc acacctccct cacgggccga
     1861 gtacggcggc acatcggtcc atccgccggc gagatcgagc cggaccggcg ccgccgcgcc
     1921 gaaggccgtc acggcgcgac ccaccactgt tgcacgctgg gaagctctcc ccgcagatcc
     1981 atctccaccc cttgcacccg ccggttggcc ccctggagac ccgccgcgtg gtagaggaac
     2041 gccaccggca ccgaatccgc gaagaagcgc tgcgccgccg ccggatcgtc cggggccggg
     2101 aggcccgcgg tctccgcgag tgacgcgaga tagcccagcc cgaggtcccc ggaaatcccg
     2161 aggacggcgg cgtcgaagtc ccgctcggga ccgtacaccc gggcgaggaa ggtcgacagc
     2221 tcgagctgcc ggatgaccac gtcgaacccc gcggccgcga gccgcgactg caacatttgc
     2281 tccagtgcgg cctccccgct ccccaccgtc agcagctcga atcgcggggc ctgccccgcg
     2341 accgcgggag acgcggaggc cgggggctcg ggcaccggaa gatatccggg c
//
LOCUS       DASUYN010000541         6740 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_613719, whole genome shotgun sequence.
ACCESSION   DASUYN010000541 DASUYN010000000
VERSION     DASUYN010000541.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6740
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_613719"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..476
                     /locus_tag="VF061_10570"
     CDS             <1..476
                     /locus_tag="VF061_10570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX6669995.1"
                     /translation="NDDELARIRNEEIGFVFQTFNLLPRATALHNVELPLVYAGMGSR
                     ERRALAADALDRVGLKDRMQHRPNELSGGQRQRVAIARALVNRPSILLADEPTGNLDS
                     ATSEEIMALFEGLHREGQTILVVTHEHDIATHTRRQVHLKDGRVERDFVTDGGAP"
     gene            473..1852
                     /locus_tag="VF061_10575"
     CDS             473..1852
                     /locus_tag="VF061_10575"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX6669996.1"
                     /translation="MIRRVVTALLVLLSACQEEEPPPVYQAIPVARRDIVVSAQASGT
                     IQPDTVVEVKSKASGEILELRVETGQLVKRGALMVRVDPRNPRNLLAQARADLDVAEA
                     RLANATSQKRRADELFKSQSITEQEHENALLDYANARAEVVRARVAVDDAQNQMDDTN
                     VLAPITGTIIEKLVERGQVISSPTRDVGGGTVLMKMADLGLVQVRTLVDETDIGKIQV
                     GQRATVTVDAYPNRPFEGTVLKIEPQAITEQNVTMFAVLVRIDNRAGLLRPGMNCEVE
                     IHVGQREDVLAVPNAALRTQRDVGSAAEVLGLSAEQVQQELASQAPSARTGGQAAMGG
                     SAAAGGTPADTQRAGQPGIRRRDPAPGARSRVADPSFGGRYVVFVQRPEGPKPVWIRT
                     GLTDLDYSEVVEGLEASDSVLILPSASLVQSQQESRERINRITGGGGLPGMQQQTAPQ
                     GGARPSGAR"
     gene            1856..3070
                     /locus_tag="VF061_10580"
     CDS             1856..3070
                     /locus_tag="VF061_10580"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX6669997.1"
                     /translation="MLLGETIAVAFQSIRANKLRAVLTMLGIIIGVGAVITMVALGSG
                     AQKAVEDRIAALGANVLTVFAGQGMRGGIRITDRTILSTDDYEALLRDASLLQAVVPE
                     MQQSLQVKYGNQNSNINIVGTTTNYVEVRNYTVPHGRMFTAGDDEARQRYAVLGAAVP
                     RMLGANPAAMINQTVQIRGINFEIIGILSEKGAAGGWSNPDEQILIPLQTAKYRVFGS
                     DRLRSMAVQVADGVPIEQGMVDLERVLRREHKIRPGQENDFTIRNQQDLLATQQQTTQ
                     VFTTLLASIAAVSLLVGGIGIMNIMLVSVTERTREIGVRKALGATRANIMLQFLVEAL
                     ALCLVGGALGVLLGVGAAVTLARVMQWNTLISPAAVTIAFGFSALVGLFFGIWPARRA
                     ARLDPIVALRYE"
     gene            3072..3761
                     /locus_tag="VF061_10585"
     CDS             3072..3761
                     /locus_tag="VF061_10585"
                     /inference="COORDINATES: protein motif:HMM:NF013460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HEX6669998.1"
                     /translation="MSDRPPVKRHHGIVRLTHWLSAILLIGLIASGLRIYAAFPHFGP
                     RGEPYPVPNPWAGESLPGWATLGGWLAGALNWHFALAWPFLITGLVYLGYLALSGEWR
                     SLLFRPRDVRPALDMQLYYLRLRREHPPQGKHNALQKAAYTGIVVLGAISVLSGFAIY
                     KPVQLWWLTALFGGFELARYWHFVAVWIFVGFTLLHVVLVLLADPASLRSMVTGWYRG
                     RFPSHDPARHE"
     gene            3739..4470
                     /locus_tag="VF061_10590"
     CDS             3739..4470
                     /locus_tag="VF061_10590"
                     /inference="COORDINATES: protein motif:HMM:NF012401.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEX6669999.1"
                     /translation="MTRRATSSRRDFLRLGLAAGPASLLAACGWDGGAFLEPKLRAFS
                     RVNDWVGEKIFLSRSRLAPEYPLTARTAERRFPAYSITWNQRRVYPAPPADWRLEVSG
                     LVRAPQRLTVEMLEGLPRVTYTVKHHCVEGWTAIGTWTGVPVSVIAELARPLPDARYL
                     RFDSFDSGYFNGWDLASAMHPQTILAYAFNDRPLTRERGAPVRLYSPIKLGYKMTKYV
                     TAMSFVRERHGGYWEDQGYPWLAGV"
     gene            4601..5668
                     /locus_tag="VF061_10595"
     CDS             4601..5668
                     /locus_tag="VF061_10595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670000.1"
                     /translation="MLAPVYSLWDGAAMLSLSRLEGFVLGLGLLFIAWRVAGAVSRRR
                     VTLRDELRALIGAVVLLALFVGGGLLSHRPMLRLEGQGPNLAAVDFHSHTSASHDVRG
                     TAMAGYDTEKNLEWHLRAGFDAVFVTDHNSTKGLVPVDVPVALCRGREVSAWRAHVVL
                     LGGDLDSVQGPYRRDWSGLLQLLADADTTYGSLSVASIPEYERHHWGRLDSLADAGLD
                     GFEIVNASPKANELSRARRDSVIDLARRSGKFVVGVSDHHGWGATSMVWSLVSVPGWQ
                     VEPDRLCRGVVDALQAGFPAVRVVERHRLRADAWWPMWLTPLGLLWETWRGMGWDMTV
                     AWLCWIWSLWVVARTRYLPSP"
     gene            5694..6689
                     /locus_tag="VF061_10600"
     CDS             5694..6689
                     /locus_tag="VF061_10600"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: protein motif:HMM:NF006829.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0033818 -
                     beta-ketoacyl-acyl-carrier-protein synthase III activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HEX6670001.1"
                     /translation="MPRTRFLGTGLAVPDRVVTNDELSQIMDTSDEWIRTRTGIQERR
                     YVREGETGVDLALAATRNALEMAGVAPASVDAIVYATSTPDHFAPGNGVFLQRALGVG
                     TIPAIDIRTQCSGFVYALSVADGWIRTGQYRRVLVVGAEVQSTGMLMTTEGRNVSVIF
                     ADGAGAVLLGPTDREDQGLLAFDLHSDGQYAEKLWVDSPGSMYHPRVSKEHIDAGRHL
                     LEMDGKEVFRHAVARMPESVRAVLTAIGRSPADLKLLLAHQANLRISEMMQRDLCLRD
                     DQVYNNIMWYGNTTAATIPIALDECVRAGRVQEGDLLALTAFGSGFLWGSAAVVW"
BASE COUNT          994 a         2348 c         2385 g         1013 t
ORIGIN      
        1 tgaacgacga cgagctggcg cgtattcgga acgaagaaat cgggttcgta ttccagacgt
       61 tcaacctgct gccgcgcgcc acggcgctgc acaacgtgga gctgccgctg gtctacgccg
      121 gcatgggctc gagggagcgc cgagcgctcg cggcggatgc gctggaccgg gtggggctca
      181 aggaccggat gcagcaccgc cccaacgagc tctcgggtgg ccagcgccag cgggtggcca
      241 tcgcccgggc gctggtgaac cggcccagta tcctgctggc ggacgagccc accgggaatc
      301 tcgacagcgc caccagcgag gagatcatgg ctctgttcga ggggctgcac cgcgagggac
      361 agacgatcct ggtggtcacc cacgagcacg acatcgccac gcacacccgc cggcaggtgc
      421 atctcaagga tggtcgggtg gagcgggact tcgtcaccga tgggggggcg ccgtgatccg
      481 gcgcgtggtc accgccctgc tggtgctcct gtccgcgtgc caggaggagg agccgccccc
      541 ggtctaccag gccatccccg tcgcccgccg cgacatcgtg gtctcggccc aggcgtcggg
      601 caccatccag cccgacaccg tggtcgaggt gaagtccaag gcctccggcg agatcctcga
      661 gctccgggtg gagaccggcc agctggtcaa gcggggcgcg ctcatggtgc gagtcgatcc
      721 tcgcaatccg cgcaacctgc tggcccaggc ccgggccgac ctggacgtgg cggaggcacg
      781 gctcgccaac gccacctccc agaagcgccg cgccgacgag ctgttcaagt cccagtccat
      841 caccgagcag gagcacgaga acgcactgct cgactacgcc aacgcccgcg ccgaggtggt
      901 ccgcgcgcgc gtggcggtgg acgacgcgca gaaccagatg gacgatacca acgtgctcgc
      961 gccgatcacc ggcaccatca tcgagaagct ggtggagcgg gggcaggtga tctcctcgcc
     1021 gacccgcgac gtcggcggcg gcaccgtgct gatgaagatg gccgacctgg ggctggtgca
     1081 ggtccgcacc ctggtggacg agaccgacat cgggaagatc caggtgggac agcgcgccac
     1141 ggtcacggtg gacgcctacc ccaaccggcc gttcgagggc accgtgctca agatcgagcc
     1201 ccaggcgatc accgagcaga acgtcaccat gttcgcggtg ctggtgcgga tcgacaaccg
     1261 ggcgggcctg ctgcgtcccg ggatgaactg cgaggtggag atccacgtcg gccagcggga
     1321 ggatgtgctc gcggtgccca acgcggcgct gcgcactcag cgggacgtcg gatcggcggc
     1381 cgaagtgctc gggctctccg ccgagcaggt gcagcaggag ctggcctcgc aggccccgtc
     1441 cgcccgcacc gggggtcagg ccgccatggg cggctcggca gccgccggcg gcacgccggc
     1501 cgacacccag cgtgccggcc agccgggcat ccgccgccgc gaccccgccc cgggcgcgcg
     1561 ctcccgggtg gccgacccct cgttcggggg ccgctacgtc gtcttcgtcc agcggcccga
     1621 ggggccgaag ccggtctgga tccgcaccgg cctcaccgac ctggactaca gcgaggtggt
     1681 cgagggcctc gaggccagcg actcggtcct catcctgccg agcgcgagcc tggtccagtc
     1741 gcagcaggag tcccgcgagc ggatcaaccg gatcaccggc ggcggcggcc tgccgggcat
     1801 gcagcagcag accgcgccgc agggcggggc gcgcccctcg ggagctcgct gacccatgct
     1861 gctgggtgag acgatcgcgg tcgcgttcca gtccatccgc gccaacaagc tccgggcggt
     1921 gctcaccatg ctcggcatca tcatcggcgt gggcgcggtg atcaccatgg tggcgctggg
     1981 cagcggggcg cagaaggcgg tggaagaccg catcgcggcg ctgggcgcca acgtcctgac
     2041 ggtgttcgcg ggccagggca tgcggggcgg catccgcatc accgaccgga ccattctgag
     2101 caccgacgat tacgaggcac tgctgcgcga cgcctcgctg ctccaggcgg tcgtgccgga
     2161 gatgcagcag tcgctccagg tgaagtacgg gaatcagaac agcaacatca acatcgtcgg
     2221 gacaaccacg aactacgtcg aggtgcggaa ctacaccgtc ccccatggcc gcatgttcac
     2281 cgcgggcgac gacgaggcgc gacagcgcta tgccgtgctc ggcgccgcgg tgccgcggat
     2341 gctgggcgcc aacccggccg cgatgatcaa tcagaccgtc cagatccggg gcatcaactt
     2401 cgagatcatc gggatcctga gcgagaaggg agccgcgggc ggctggagca acccggacga
     2461 gcagatcctg atcccgctcc agaccgccaa gtaccgggtg ttcggctccg accggctgcg
     2521 ctccatggcg gtgcaggtgg ccgacggcgt accgatcgag cagggcatgg tggatctcga
     2581 gcgggtgctg cggcgggagc acaagatccg accgggacag gaaaacgact tcaccatccg
     2641 caaccagcag gacctgctcg ccacccagca gcagaccacc caggtgttca ccaccctcct
     2701 cgccagcatc gcggcggtga gcctcctggt gggcggcatc ggcatcatga acatcatgct
     2761 ggtctcggtg accgagcgga cccgcgagat cggcgtccgg aaggcgctcg gcgccacccg
     2821 ggcgaacatc atgctccagt tcctggtcga ggccctcgcg ctctgtctcg tgggcggcgc
     2881 gctgggcgtc ctcctcggcg tcggcgccgc ggtcacgctg gcgcgcgtga tgcagtggaa
     2941 cacgctgatc tcgccggcgg cggtcaccat cgccttcggg ttcagcgcgc tggtgggcct
     3001 cttcttcggc atctggcccg cccgccgggc cgcgaggctg gaccccatcg tcgcgctgag
     3061 gtacgagtag gatgagcgac cggccgccgg tgaagcggca ccacgggatc gtgcgactga
     3121 cgcactggct cagcgcgatc ctcctcatcg gcctgatcgc gagcgggctc cggatctatg
     3181 cggcgttccc ccacttcggc ccccggggcg agccctaccc ggtgcccaac ccgtgggccg
     3241 gcgagagtct gcccggctgg gccacgctgg gcgggtggct cgcgggcgcg ctcaactggc
     3301 acttcgcgct ggcctggccc ttcctcatca ccgggctggt gtacctgggc tacctggcgc
     3361 tgagcggcga gtggcgctcg cttctcttcc ggccccgcga cgtccggccc gcgctggaca
     3421 tgcagctcta ttacctgcgg ctccggcggg agcacccgcc gcagggcaag cacaacgccc
     3481 tgcagaaggc ggcctatacc ggaatcgtcg ttctgggcgc aatttcggtg ttgagcgggt
     3541 tcgccatcta caagccggtc cagctctggt ggctcacggc gctgttcggc ggcttcgagc
     3601 tcgcccggta ttggcacttc gtggcggtgt ggatcttcgt cgggttcacc ctgctgcacg
     3661 tggtgctggt gctgctggcg gacccggcct cgcttcggtc catggtgacc ggctggtacc
     3721 gcgggaggtt ccccagtcat gacccggcgc gccacgagta gccgtcgcga cttcctccgg
     3781 ctcggccttg ccgccgggcc ggcatcgctg ctcgcggcct gcggatggga cggcggagcg
     3841 ttcctcgagc cgaagctgcg cgccttcagt cgggtcaacg attgggtcgg cgagaagatc
     3901 tttctgtccc gctcgcgcct cgcgccggag tatcccctga cggcgcgcac ggcggagcgt
     3961 cgctttcccg cttactcgat cacctggaac cagcggcggg tgtaccccgc gccgccggcg
     4021 gactggcggc tggaggtgag cgggctggtc cgcgcacccc agcggctcac cgtggagatg
     4081 ctggaagggt tgccgcgcgt gacctacacc gtgaagcatc actgcgtgga gggatggacg
     4141 gcgatcggca cctggaccgg tgtaccggtc tccgtgatcg ccgagctggc tcgcccgctt
     4201 ccggacgcgc ggtatcttcg cttcgactcg ttcgacagcg ggtacttcaa cggctgggac
     4261 ctcgccagcg cgatgcaccc gcagaccatc ctggcctatg ccttcaacga ccgtccgctc
     4321 acccgcgagc gcggcgcgcc ggtgcgactc tattccccga tcaagctcgg ctacaagatg
     4381 acgaagtacg tcaccgcgat gagcttcgtt cgagagcggc acggcgggta ctgggaggac
     4441 cagggctatc cctggctcgc cggggtctag cctccttccc ccgctcgggc tgacgctcgg
     4501 gctcctggcg gcgcggctcg ccggggcccc ggcgctctcc gacccccacc gccatcccca
     4561 cccgccaggg cttcacctca aggctccccc ctcctacgtc gtgctcgcgc cggtctacag
     4621 cctgtgggac ggcgcggcca tgctgagtct cagccggctc gagggcttcg ttctcggtct
     4681 cgggctgctc ttcatcgcct ggcgggtcgc cggggcggtc agccgccggc gggtgacgct
     4741 gcgcgacgag ctccgtgcac tcatcggggc ggtggtgctg ttggcgctgt tcgtgggcgg
     4801 ggggctcctc tcccaccggc cgatgctccg gctcgagggc cagggcccga acctggcggc
     4861 ggtggacttc cacagccaca ccagcgcctc gcacgacgtg cggggcaccg cgatggccgg
     4921 ctacgatacc gagaagaacc tggagtggca ccttcgcgcc ggattcgatg cggtcttcgt
     4981 gaccgatcac aacagcacca aggggctggt gccggtggac gtccccgtgg cgctctgccg
     5041 cggccgcgag gtgagtgcgt ggcgggccca cgtcgtcctc ctgggtgggg acctggactc
     5101 ggtccagggt ccctaccgcc gggactggtc gggactgctg cagctcctgg cggacgcgga
     5161 caccacgtat gggtcgctct cggtcgcctc catcccggag tacgagcgcc accactgggg
     5221 tcggctcgac tcgctggcgg acgcggggct cgacgggttc gagatcgtga atgcctcgcc
     5281 caaggccaac gagctgtccc gcgcgcgccg cgacagcgtg atcgacctcg cccggcgttc
     5341 cgggaagttc gtggtcggcg tgagcgacca ccacggctgg ggcgcgacca gcatggtgtg
     5401 gagcctggtg agcgtgcccg ggtggcaggt cgagcccgac cggctctgcc ggggggtggt
     5461 ggacgcgctc caggcgggct tcccagccgt gcgggtggtc gagcggcacc gcctccgcgc
     5521 cgatgcctgg tggccgatgt ggctcacccc actcggcctg ctgtgggaga cctggcgcgg
     5581 aatgggatgg gacatgaccg tggcgtggct gtgctggatc tggtcgctct gggtggtggc
     5641 acggacacgg tacctgccct caccctgaca ctgtcggcag gatacattgg ggcatgccgc
     5701 gcacccgctt cctcggcacc ggcctggccg tgcccgaccg cgtagtcacc aacgacgaac
     5761 tctcccagat catggacacc agcgacgagt ggatccggac ccgcacaggg atccaggagc
     5821 ggcgctacgt ccgcgagggg gagaccggcg tggacctggc cctcgccgcc acccggaacg
     5881 ccctggagat ggccggcgtg gcgcccgcct cggtggacgc catcgtctac gccacctcca
     5941 cccccgacca cttcgccccc ggaaacggtg tcttcctcca gcgggccctc ggcgtcggga
     6001 ccatcccggc gatcgacatc cgcacccagt gcagcgggtt cgtctacgcc ctgtcggtgg
     6061 ccgatgggtg gatccgcacc gggcagtatc gccgggtgct ggtggtgggc gcggaagtgc
     6121 agtccaccgg gatgctgatg acgacggagg ggcggaacgt ctcggtgatc ttcgccgacg
     6181 gcgcgggggc ggtgctcctg gggccgaccg accgcgagga ccagggcctg ctggccttcg
     6241 atctccattc cgacggccag tacgccgaaa agctctgggt ggacagcccg ggctccatgt
     6301 accacccgag ggtctcgaag gagcacatcg acgcggggcg acacctcctt gagatggacg
     6361 ggaaggaggt cttccgccac gcggtggcgc gcatgcccga gtccgtccgc gcggtcctga
     6421 ccgcgatcgg ccgcagcccg gccgacctca agctgctgct tgcccaccag gccaatctcc
     6481 ggatcagcga gatgatgcag cgcgacctct gcctccggga cgatcaggtc tacaacaaca
     6541 tcatgtggta cggcaacacg accgccgcca ccatccccat cgcgctggac gaatgcgtgc
     6601 gggcgggacg ggtgcaggag ggggacctgc tggcgctgac ggcgtttggc agcgggttcc
     6661 tgtgggggag cgcggcggtg gtgtggtaga gacctagtca ccctgaacga accgaggggg
     6721 ccatatcgag catggccccc
//
LOCUS       DASUYN010000542         2217 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1938206, whole genome shotgun sequence.
ACCESSION   DASUYN010000542 DASUYN010000000
VERSION     DASUYN010000542.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2217)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2217)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2217
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1938206"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1201)
                     /locus_tag="VF061_10605"
     CDS             complement(<1..1201)
                     /locus_tag="VF061_10605"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF021127.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0045227 - capsule polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HEX6670002.1"
                     /translation="MRLRVAPFIWLAALGACAKAPPPPPAPRPAPDSAPPPAPPAPPA
                     PLPSLEPPPPPRASVSLTFVGDINLGTLTLPEGVPPDEGRGLFEGARPALQADLVVGN
                     FEGVLADSGTTYKCGPEGRRVPEPDTVAAKPPPRRPTLPRRPEPPRLCYAFLTPTALA
                     PRLVEAGFTHLNLANNHANDFGADGRATTERLLDSLGVRTYGPLGSIAVDTVRRGDSL
                     TMVGLVGFATYPHSYDLLDIQRSAAVVDSVRDLVDLLVITFHGGAEGARALHVPEAAE
                     SLGREPRGDLRAWARAVIDAGADAVVGHGPHVPRGIEYYRGKPIAYSLGNFLTYRGFN
                     LAGPLGLTGVLRLEAAPDGRWARARFAPMAQLPGRGPAPDPTGAALELVRTLSREDFG
                     TAAARVGE"
     gene            complement(1198..>2217)
                     /gene="gltX"
                     /locus_tag="VF061_10610"
     CDS             complement(1198..>2217)
                     /gene="gltX"
                     /locus_tag="VF061_10610"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: protein motif:HMM:TIGR00464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009332 - glutamate-tRNA ligase complex
                     [Evidence IEA];
                     GO_function: GO:0004818 - glutamate-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HEX6670003.1"
                     /translation="EEATIRFFVPDDEIAWDDAVHGRISFQGRDVDDFVILRSDDSAI
                     YNMAVVSDDVAMAITHVIRGDDHISNTPKQIALYRALGHEIPVFAHVPMILGPDGKKL
                     SKRHGATAVGDYQDQGILAPAMRNFLALLGWSPGGDREILPEDEMIRLFTLEGIQKKA
                     AVFDATKLEWMNGQYLSALPADELLAPVRRRLDQLGVKDGGRDLRPLIDAVKARSRTI
                     LHVADQVVVRLDPSRSTLDEKGAALIRKMGPAFSANLRLAADALEPLRNGAWTADRLL
                     ACLKGVAETHGLKLGDAMQPIRVALTGSTVSEPVNELLEVVGPEQSLARIREVARTSG
                     GQPGA"
BASE COUNT          313 a          792 c          797 g          315 t
ORIGIN      
        1 cctccccgac ccgcgccgcc gccgtcccga agtcctcccg cgacagcgtt cgcaccagct
       61 ccagcgccgc acccgttgga tcgggtgcgg gaccccggcc gggcagctgc gccatcggcg
      121 cgaaccgcgc ccgggcccac ctgccgtcgg gcgccgcctc gagccgcagc acgccggtga
      181 gtcccagcgg tccggccagg ttgaacccgc gataggtcag aaagttgccc agcgaatagg
      241 cgatcggctt gccccggtag tactcgatcc ctcgcggcac gtggggtccg tggcccacca
      301 ctgcatccgc tcccgcgtcg atgaccgcac gagcccaggc gcgcaggtcg ccgcgcggct
      361 cacggccgag ggactcggcg gcctccggca cgtgcagcgc gcgggcaccc tcggcaccgc
      421 cgtgaaaggt gatcaccagc aggtccacca ggtcccgcac cgaatccacg acggccgcgc
      481 tgcgctgaat atccagcagg tcgtacgagt gcggataggt cgcgaagccg accaacccga
      541 ccatggtcag actgtcgccg cggcgcaccg tatccaccgc gatgctcccc agcggaccgt
      601 aggtgcggac gcccagagag tcgaggagcc gctcggtcgt ggcacgcccg tcggccccga
      661 aatcgttggc gtgattgttc gccaggttga ggtgggtgaa gcccgcctcc accaggcggg
      721 gcgccagcgc ggtgggcgtg aggaaggcgt agcagaggcg cggcggctcg gggcgtcgcg
      781 gtagcgtggg ccgtcgcggc ggcggcttcg ccgcgacggt gtccggctcc ggcacgcgcc
      841 ggccctcggg gccgcacttg taggtggtgc cgctgtcagc cagcacgccc tcgaagttgc
      901 cgaccacgag atcggcctgg agcgccgggc gggccccctc gaagaggccg cggccttcgt
      961 ccggcggtac cccctcgggc agggtcagcg tgcccagatt gatgtcgccg acgaacgtga
     1021 ggctgaccga cgcgcgcggc gggggcggcg gctccagcga gggcaggggg gcggggggcg
     1081 ccggcggagc cggaggtggc gcgctgtcgg gtgcaggccg tggagcaggg ggaggcggcg
     1141 gtgccttggc gcacgcgccc agcgccgcca gccaaatgaa aggagcgacg cgaagtctca
     1201 cgcgccgggc tggcctccgc tggtcctcgc cacctcgcgg atccgggcca gactctgctc
     1261 cggtcccacc acttccagca gctcgttcac cggctccgac acggtggagc cagtgagcgc
     1321 gacccggatc ggctgcatgg cgtcccccag cttgagcccg tgcgtctccg ccaccccctt
     1381 gagacaggcg agcagccggt ccgcagtcca ggcgccgttg cggagcggtt ccagcgcgtc
     1441 cgcggccagc cgcaggttgg cggaaaaggc cggccccatc ttccggatca gcgccgcccc
     1501 cttctcgtcg agtgtcgagc gggaggggtc cagtcggacc acgacctggt cggcgacgtg
     1561 gaggatggtc cgggagcgcg ccttcaccgc gtcgatcaag ggccgtaggt cgcgcccgcc
     1621 gtccttcacg ccgagctggt cgaggcgccg gcggaccggc gcgagcagct cgtccgccgg
     1681 cagcgcgctc aggtattggc cgttcatcca ttccagcttg gtggcgtcga agaccgccgc
     1741 cttcttctgg ataccctcca gcgtgaagag ccggatcatc tcgtcctccg gcaggatctc
     1801 ccggtcacca ccgggcgacc agccgagaag ggcgaggaag ttccgcatcg cgggagccag
     1861 gatgccctgg tcctggtagt cgcccaccgc cgtagccccg tgccgcttgg acagcttctt
     1921 cccgtcgggg ccgaggatca tggggacgtg ggcgaagacg gggatctcgt gtcccagcgc
     1981 gcggtacagg gcgatctgct tcggcgtgtt cgagatgtgg tcgtcgcccc ggatcacgtg
     2041 ggtgatcgcc atggccacgt cgtcgctcac caccgccatg ttgtagatgg cggagtcgtc
     2101 gctccggagg atcacgaagt catccacgtc gcgcccctgg aagctgatcc gcccgtgtac
     2161 cgcgtcgtcc caggcgattt cgtcgtcggg gacgaagaat cggatggtgg cctcctc
//
LOCUS       DASUYN010000543         2575 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1716723, whole genome shotgun sequence.
ACCESSION   DASUYN010000543 DASUYN010000000
VERSION     DASUYN010000543.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2575)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2575)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2575
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1716723"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..967
                     /gene="murF"
                     /locus_tag="VF061_10615"
     CDS             <1..967
                     /gene="murF"
                     /locus_tag="VF061_10615"
                     /EC_number="6.3.2.10"
                     /inference="COORDINATES: protein motif:HMM:NF019850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0047480 -
                     UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HEX6670004.1"
                     /translation="TYATRANLNNLVGVPLTILEAPSATEALVVEAGANLPGEIARYR
                     EIIRPDVVVITNAVAGHLEGFGSLDGVLEEKLSLTAGVELAVVGVDPPALAQGARRRA
                     RRVRTAALQDADLVPERVDLGPDARPILTLSGRTFTLAARGLHQADNAVRVWAVAEAL
                     GLDLDEVAGALGRFTLPGGRGELLQVGGLTILNDCYNANPQSFRAAIATARSLRQGRP
                     LVFVAGTMRELGQESGVLHERVAYELVDLGPDLLAAVGDFVTALQPYREQLGERLVTA
                     SDPPALAPLLSERLRGDEVVVLKASRGVALERILPALTARANSLG"
     gene            974..2101
                     /gene="mraY"
                     /locus_tag="VF061_10620"
     CDS             974..2101
                     /gene="mraY"
                     /locus_tag="VF061_10620"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008963 -
                     phospho-N-acetylmuramoyl-pentapeptide-transferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HEX6670005.1"
                     /translation="MFYHWLAPLGQTHIIFNLFNYISFRAAGATVTALLLAFLVGPPV
                     IRRLRARKVGQIIRAEGPASHQSKRGTPTMGGLIILLATIVPTLLWAPLTNRFVVVAM
                     LSILWMGCIGFLDDYLKIVQGKSRGLVAKWKLAGQVSFGALLGLFLAYNPVVPTETIP
                     ATATTLPFFKYLVVNFSPVLYVLFVTVVITGSSNAVNLTDGLDGLATGLAGISAAAFA
                     GFAYLFGRTDVTSYLNLFYLPGAGELAIFCAALMGATIGFLWFNAHPAQVFMGDTGSL
                     AIGGGLGTVAILLKAEFLLLLIGGVFAAEAISVLVQTGTYKWYKRTRGKEYADAHRVF
                     RMAPLHHHFEKLGWAETTVVTRFYILGLLCALVALSTLKVR"
     gene            2104..>2575
                     /locus_tag="VF061_10625"
     CDS             2104..>2575
                     /locus_tag="VF061_10625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670006.1"
                     /translation="MARVPLLEQWRASGREVAVVGLGKSGVAAALLLRDHGVPVYASD
                     IGTGPTFDAWATKLGQAGATVHIGGHDLDRIARAALTFTGLLSLDVPALLDATPLKHT
                     LEQLIPFEEIGRHVAEGRLIAAAVVATSALTGRSVVFHQGGTPEAVRDDKRGIDY"
BASE COUNT          353 a          907 c          899 g          416 t
ORIGIN      
        1 cacctacgcg acccgcgcca acctcaacaa cctcgtgggg gtcccgctca ccatcctcga
       61 ggccccgtcg gcgactgaag cgctggtcgt cgaggccgga gccaaccttc cgggagagat
      121 cgcgcgctat cgcgagatca tccggcccga tgtcgtggtc atcaccaacg ccgtagccgg
      181 gcacctggag gggttcggct cgctggacgg tgtgctggag gagaagctct cgctcacggc
      241 gggggtggag ctcgccgtgg tgggggtcga ccctccggcg ctggcgcagg gcgcgcggcg
      301 ccgcgcgcgc cgggtgcgca cggccgcgct ccaggacgcg gatctggtgc cggaacgggt
      361 tgacctggga cccgacgcgc gccccatcct gacgctgagc ggccgcacgt tcacgctcgc
      421 cgcccgcggg ctgcatcagg cggacaacgc cgtgcgggtc tgggcggtcg cggaggcgct
      481 gggcctcgac ctcgacgagg tcgcgggcgc gctcggccgg ttcacgcttc ccggcggccg
      541 cggcgagctg ctccaggtcg gcggcctcac gattctcaac gactgctaca acgccaaccc
      601 gcagtcgttc cgggccgcga tcgcgacggc caggagcctg cggcaggggc ggccgctggt
      661 gttcgtggca ggcaccatgc gcgagctggg gcaggaatcg ggggtgctgc acgagcgggt
      721 ggcgtacgag ctcgtggacc tcggccccga tctgctggcg gcggtaggcg acttcgtcac
      781 ggcgctccag ccctaccggg agcagctcgg tgagcggctg gtgacggcgt ccgatccgcc
      841 cgccctcgcc ccgctcctga gcgagcggct ccggggcgac gaggtggtgg tgctcaaggc
      901 atcccgcggg gtggcgctcg aacgtatact tccggcgctc accgctcgcg ccaattctct
      961 cggctgagga cggatgttct atcattggct cgcgccgctc ggccagacgc acatcatctt
     1021 caatctcttc aactacatca gcttcagggc ggcgggcgcg acggtgacgg cgctgctgct
     1081 cgcctttctg gtcggacccc cggtcatccg ccggttgcgg gcccggaagg tgggccagat
     1141 catccgggcc gaagggcccg ccagccatca gagcaagcgc ggaacgccca cgatgggcgg
     1201 tctcatcatc ctgctcgcca cgatcgtgcc cacgctgctc tgggccccgc tgaccaaccg
     1261 cttcgtcgtg gtcgccatgc tctccatcct ctggatgggc tgcatcggct ttctcgacga
     1321 ctacctgaag atcgtgcagg ggaaatcgcg cggcctggtg gccaagtgga agctggccgg
     1381 gcaggtgagc ttcggggccc tgctgggact gttcctggcc tacaatcccg tcgtgcccac
     1441 cgagaccatt ccggccacgg ccaccacgct gccgttcttc aagtatctgg tggtcaactt
     1501 ctcgcccgtg ctctacgtgc tcttcgtgac cgtggtgatc accgggagca gcaacgcggt
     1561 caacctgacc gacgggctcg acgggctcgc taccggcctc gccgggatct cggccgcggc
     1621 cttcgccgga ttcgcctacc tgttcggccg gaccgacgtg acgagctacc tcaacctctt
     1681 ctacctgccc ggggcagggg agctggcgat cttctgcgcc gcgctcatgg gtgcgacgat
     1741 cggcttcctc tggttcaacg cccacccggc acaggtgttc atgggcgaca ccgggagcct
     1801 cgccatcggt ggcgggctgg gcacggtggc gatcctgctc aaggccgagt tcctgctgct
     1861 cctgatcggc ggggtgttcg cggcggaggc aatctcggta ctggtccaga ccggcaccta
     1921 caagtggtac aagcgaaccc gagggaagga gtacgccgac gcccaccggg tgttcaggat
     1981 ggctccgctg caccaccact tcgagaagct gggctgggcc gagacgaccg tggtgacccg
     2041 gttctacatc ctgggactgc tctgcgccct ggtggcgctc tccaccctga aggtgcgctg
     2101 agcatggccc gggtccctct gctcgagcag tggcgcgcca gcgggcggga ggtggcggtc
     2161 gtcggcctgg ggaagagcgg tgtggcggcg gcactcctgc tccgcgatca cggcgtcccg
     2221 gtctatgcct ccgacatcgg gaccggcccc accttcgatg cctgggcgac caagctcggc
     2281 caggcgggcg cgacggtcca catcgggggc cacgatctcg accggatcgc ccgcgcggcg
     2341 ctgaccttca ccgggctgct gtcgctcgac gtcccggcgc tgctggacgc gacgccgctc
     2401 aagcacacgc tcgagcagct gatcccgttc gaggagatcg gccgccacgt ggccgagggc
     2461 cggctgatcg ccgccgccgt cgtcgccacg tccgcgctga ccgggcgcag cgtcgtcttc
     2521 caccagggcg gcacgcccga ggcggtccgc gacgacaagc gcggcatcga ctacg
//
LOCUS       DASUYN010000544         3590 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_833408, whole genome shotgun sequence.
ACCESSION   DASUYN010000544 DASUYN010000000
VERSION     DASUYN010000544.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3590)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3590)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3590
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_833408"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..303)
                     /locus_tag="VF061_10630"
     CDS             complement(<1..303)
                     /locus_tag="VF061_10630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670007.1"
                     /translation="MSATFPGRVPAAAVLAAVWLLAPTQGQAQGQRCVFQIDNVDRQG
                     AVVETRQGTNYFAGGNVRLSCRGTTISMESDSVAAYGGTIVQFIGRVKYRDSTLTMD"
     gene            complement(300..866)
                     /gene="lptC"
                     /locus_tag="VF061_10635"
     CDS             complement(300..866)
                     /gene="lptC"
                     /locus_tag="VF061_10635"
                     /inference="COORDINATES: protein motif:HMM:TIGR04409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HEX6670008.1"
                     /translation="MRTAARRPLSLLLLAATLAGCEESGARPTTTIQAPDSADQVLEG
                     FSHYVTNDGIRRSRVEADTAYFYEATQITNLVNVKATFYDLKGQESSTLTARTGVYRW
                     QDGSMEANGNVVVVSPDGRRLATERLRYDNASNQISTDRQFTFDRGEEHLEGNSFRSD
                     PDFRNVVTDRPRGVAGDGMLLPGQGGEQ"
     gene            complement(863..1825)
                     /locus_tag="VF061_10640"
     CDS             complement(863..1825)
                     /locus_tag="VF061_10640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HEX6670009.1"
                     /translation="MSDPRATVELGRRVLRLEGAAVTAVADRLDERFDRAVQLLADAG
                     GRVIVSGVGKSGLVARKLAATLTSTGTPASYLHPIDSLHGDLGIVGRSDVAVVLSKSG
                     DSQDLFGLVGSLQRLNVPIIAITGALDSPLARVATVVLDGSVAEEACPHDLAPTASTT
                     VALALGDALAVALLERKGFRPEDFATLHPGGALGRRLLLQVRDVMLAPGRILPPDATM
                     REAVVSLARDRGLALIGTGGRLSGVLTTGDLTRLAERDPDFLDRPVSQVMTRSPRTTA
                     PDDLAAAAVGTMERNGVIALPVISDGGTIEGVVHLHDLMRAGAV"
     gene            complement(1818..2375)
                     /locus_tag="VF061_10645"
     CDS             complement(1818..2375)
                     /locus_tag="VF061_10645"
                     /inference="COORDINATES: protein motif:HMM:TIGR01670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase family protein"
                     /protein_id="HEX6670010.1"
                     /translation="MEIDPARAARVRLLGLDVDGVLTDNGIWVGRVAGERVELKRFDI
                     QDGLGHRLLRTAGIPVLWLSGRRSEATTLRAEELQVDELLQVGGPEKLDALGQVLSRR
                     GLEWHEVAYVGDDLADLQVMRRVGLPIAVANAVPEIRAVALAVTRATGGYGAVREIVD
                     ALLRARGVWSDMLERYFTERTSRDV"
     gene            complement(2365..3138)
                     /gene="kdsA"
                     /locus_tag="VF061_10650"
     CDS             complement(2365..3138)
                     /gene="kdsA"
                     /locus_tag="VF061_10650"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008676 - 3-deoxy-8-phosphooctulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HEX6670011.1"
                     /translation="MIAGPCVVESGDVLPRVALVLARYAERRGVPVCFKASFDKANRS
                     RLAAPRGPGAEEGLRLLERVRTESGLPLLTDIHEAHQAAPTAEVVDALQIPAFLCRQT
                     DLLLAAGRTGRPVNVKKGQWMAAEGLTGSVEKVRSGGSRDVAVTERGTFFGYGDLVVD
                     MRNFARLRDATGAPVIFDATHSVQRPGQGAAGGSGGEREHIPALLAAAAGAGADGFFL
                     ETHPDPAGAPSDAATQWPLDRLPELLDRTLDLWTRVHGD"
     gene            complement(3168..>3590)
                     /locus_tag="VF061_10655"
     CDS             complement(3168..>3590)
                     /locus_tag="VF061_10655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683113.1"
                     /note="Members of this family of hydrolases with an active
                     site Cys residue belong to MEROPS family C26; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HEX6670012.1"
                     /translation="TPVIALMQSQREIADLGGTMRLGAYTARLRPASRAAQAYGTTEI
                     SERHRHRWEVNNAYRDVLAEYGLRLSGQSPDGGLVEVIELPDHAWYIGCQFHPELKSR
                     PTRPHPLFAGFIGAALRRRQGRGSGESPATRTMAEAAR"
BASE COUNT          480 a         1348 c         1257 g          505 t
ORIGIN      
        1 gtccatcgtg agcgtcgagt cgcggtactt cacccggccg atgaactgca cgatggtgcc
       61 gccgtaggcg gcaacgctgt cgctctccat cgagatcgtg gtgccccggc agctgagccg
      121 cacgttgccg ccggcgaagt agttcgtgcc ctgccgcgtc tccaccaccg cgccctggcg
      181 gtccacgttg tcgatctgga acacgcagcg ctggccctgg gcctggcctt gggtgggggc
      241 caggagccat acggccgcga gcaccgcggc agcggggacg cggccgggga aggtggcgct
      301 cattgctcgc ccccctgccc cggcaggagc atgccgtcgc cggcgacgcc ccgcggccgg
      361 tcggtcacca cgttccggaa atcgggatcg gagcggaagc tgttgccctc caggtgctcc
      421 tcgccgcggt cgaaggtgaa ctgccgatcg gtggagatct ggttgctggc gttgtcgtac
      481 cgcagtcgct ccgtggcgag ccgccgcccg tcgggtgaca cgaccaccac gttgccgttg
      541 gcctccatgg acccgtcctg ccagcgatac acgccggtcc tcgcggtcag cgtcgagctc
      601 tcctggccct tcaggtcgta gaacgtcgcc ttgacgttga ccaggttcgt gatctgggtg
      661 gcctcgtaga agtaggcggt gtccgcctcc accctgctgc gacggatgcc gtcgttcgtc
      721 acgtagtggg agaatccctc cagcacctgg tcggcgctgt ccggcgcctg aatggtagtg
      781 gtgggtcggg caccggactc ctcgcagccg gcgagggtcg ctgccagcag caggagagac
      841 agcggccgcc gtgccgccgt cctcacaccg cccccgcccg catcagatcg tgcaggtgga
      901 ccactccctc gatcgttccc ccgtccgaga tcaccggcag cgcgatgacg ccgttccgct
      961 ccatggtgcc gacggccgcc gccgcgaggt cgtccggcgc cgtggttctc gggctccgcg
     1021 tcatcacctg ggagacgggc cggtcgagga agtcgggatc ccgctcggcc aggcgcgtca
     1081 ggtcgccggt ggtgagcacc ccgctgagcc ggcccccggt gccgatcagg gccagacccc
     1141 ggtcgcgcgc gagactcacc accgcttccc gcatggtggc gtcgggcggc aggatccggc
     1201 cgggtgcgag catgacgtcg cgcacctgga gcagcaggcg gcgccccagc gcgccgcccg
     1261 ggtggagcgt cgcgaaatcc tcgggccgga atcccttgcg ttccaacagc gccaccgcca
     1321 gggcgtcccc cagcgcgagc gcgaccgtcg tgctcgcggt gggtgccaga tcgtggggac
     1381 aggcctcctc ggccaccgag ccgtcgagca cgaccgtcgc cacccgcgcc agcggcgagt
     1441 cgagcgcgcc ggtgatggcg atgatcggga cgttcagccg ctggagcgag cccaccagcc
     1501 cgaagagatc ctgggagtcc ccgctcttgc tgagcaccac ggcgacgtcg ctccgaccca
     1561 cgatgcccag gtccccgtgc agggaatcga tcgggtggag atagctcgcc ggcgtgcccg
     1621 tggacgtgag cgtcgccgcg agcttgcgcg cgacgaggcc ggacttgccc actccactga
     1681 cgatgacccg gcctccggcg tcggcgagaa gctggaccgc gcggtcgaac cgctcgtcga
     1741 ggcggtcggc caccgccgtc acggcggcgc cttccagccg gagcacgcgt cgcccgagct
     1801 cgaccgtcgc gcgcggatca gacatcccgg ctcgtccgct cggtgaaata gcgctccagc
     1861 atgtcgctcc agactccccg ggccctgagc aacgcgtcca cgatctcccg caccgcgccg
     1921 tacccgccgg tggcgcgggt gaccgcgagg gcgacggcgc ggatctcggg gaccgcgttg
     1981 gcgaccgcga tcggcagccc gacccgccgc atgacctgga gatcggcgag gtcgtcgccc
     2041 acgtaggcga cctcgtgcca ctccagcccg cggcgcgaga gcacctggcc gagggcgtcg
     2101 agcttctcgg ggccgcccac ctggagcagc tcgtccacct gcagctcctc ggcgcggagc
     2161 gtggtcgcct ccgaccgccg cccgctcagc cagaggaccg ggatcccggc cgtccgcagc
     2221 agccggtgcc ccagcccgtc ctggatgtcg aagcgcttca gctccacccg ctcgcccgcc
     2281 acccgtccga cccagatgcc gttgtcggtg agcacgccgt ccacgtcgag tccgagaagc
     2341 cggacccggg ccgcgcgcgc cgggtcaatc tccatggacg cgggtccaga gatcgagcgt
     2401 tcggtcgagc agctccggca gccggtcgag cggccattgg gtcgccgcgt cgctgggggc
     2461 cccggcgggg tccggatgcg tctcgaggaa gaacccgtcc gccccggccc cggccgccgc
     2521 ggccaggagc gccggaatgt gctcccgctc cccgccgctg ccgccggccg caccctgccc
     2581 cggccgctgc accgagtgcg tcgcgtcgaa gatgaccggc gcgccggtgg cgtcgcggag
     2641 ccgggcgaag ttccgcatgt ccaccaccag atcgccgtag ccgaagaacg tgccgcgctc
     2701 ggtgaccgcg acgtcccggc tcccgccgct ccgcaccttc tccaccgaac ccgtgaggcc
     2761 ctcggcagcc atccactgcc ccttcttcac gttcacgggg cggccggtgc gcccggcggc
     2821 gagcaggagg tcggtctgac ggcagaggaa ggccgggatc tggagcgcgt ccaccacttc
     2881 cgccgtcggc gccgcctggt gcgcctcgtg aatgtcggtg aggagcggca gtccgctctc
     2941 cgtgcgcacg cgttcgagca gccggagccc ttcctcggca cccggccctc gcggcgcggc
     3001 gagcctcgac cggttggcct tgtcgaagct ggccttgaag cagacgggca caccgcgccg
     3061 ctcggcgtag cgggccagca ccagcgccac gcggggcagc acgtcgccgg actcgacgac
     3121 gcacgggccc gcgatcacga acggcgttcg agcaaacgac cagccgctca acgcgcggct
     3181 tccgccatcg tcctggtggc cggagactcg ccgctgcccc gtccctgccg ccgcctgagc
     3241 gccgcgccga tgaagcccgc gaagagcggg tgggggcgcg tggggcggga tttcagctcc
     3301 gggtggaact ggcagccgat ataccaggcg tggtccggca gctcgatcac ctccaccagt
     3361 cctccgtcgg gcgactggcc cgagagccgc aacccgtatt ccgcgagcac gtcacggtag
     3421 gcgttgttca cctcccaccg gtgccggtgg cgctcgctga tctccgtggt gccgtaggcc
     3481 tgcgcggcgc gggaggccgg ccgcagcctc gcggtgtagg cgccgagccg catggtgccc
     3541 ccgaggtcgg cgatctcccg ctgcgactgc atgagcgcga tcacgggggt
//
LOCUS       DASUYN010000545         2576 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_833507, whole genome shotgun sequence.
ACCESSION   DASUYN010000545 DASUYN010000000
VERSION     DASUYN010000545.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2576)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2576)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2576
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_833507"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..351)
                     /locus_tag="VF061_10660"
     CDS             complement(<1..351)
                     /locus_tag="VF061_10660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670013.1"
                     /translation="MRPVRALALFAVALLLGGCVYYNGMYNTKRLASSARKAERDGRT
                     FEANTLWGQVITRAESLVARHPDSKYVDEALVLKGLALSRLRQCQAAVAPLGRVSLLP
                     QDAEVTEEASLALGR"
     gene            complement(348..1532)
                     /locus_tag="VF061_10665"
     CDS             complement(348..1532)
                     /locus_tag="VF061_10665"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: protein motif:HMM:NF013670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEX6670014.1"
                     /translation="MLAALALAAATAVAPGQITVAGARGVATIPVRADPTGAPVVSAP
                     QLAAALGAAVRVQDGWAEVVVARQPFRFLVGAPLFFFSSQVHTLANPVWQSRDTVYLP
                     FQFVAEIIPYYLGERYRYDARAARLEDIAARPSAARASAPAQRLPSGLRPGHVVTIDP
                     GHGGVDPGNPGTYFPRGVREKDVVLQIGLLLRDELQKRGVGVRMTRTTDTLIALGDRG
                     AVCTAACDLFVSLHVNSLARRRGYTEVRGFETFFLAEARTEDAARVARMENDAVRFET
                     GESEGPRAAGLDFILKDLQLNEHLRESARAAELVQKKLRTAHTGLDRGVKQAGFMVLT
                     TARRPAILVELGYSTNPQDGRLLTTRKSQREMAVAVADAVVEYLRDYERKVGGGDAGG
                     GR"
     gene            complement(1532..2032)
                     /gene="smpB"
                     /locus_tag="VF061_10670"
     CDS             complement(1532..2032)
                     /gene="smpB"
                     /locus_tag="VF061_10670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017978988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HEX6670015.1"
                     /translation="MSPDSSPQAERRKSVARNPKATHDYHILETWETGIVLTGTEVKS
                     LRNGKASIKEAYARIRNGEVFLEGMNITPYEQGNRYNHDPVRSRKLLLHRREIGKLIG
                     SVEQQGLTLVPLELYFKDGRAKVVLALGRGKKLHDKREALKRRVSEREAARDVSRGLS
                     RAARDS"
     gene            2127..2210
                     /locus_tag="VF061_10675"
     tRNA            2127..2210
                     /locus_tag="VF061_10675"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2161..2163,aa:Leu,seq:cag)
     gene            complement(2367..>2576)
                     /locus_tag="VF061_10680"
     CDS             complement(2367..>2576)
                     /locus_tag="VF061_10680"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEX6670016.1"
                     /translation="GARLIPLGQLPDRLGELDGHAEIVTYCHKGSRSMKALEILRGAG
                     FGKVRSLAGGVDAWASRIEPGMARY"
BASE COUNT          372 a          913 c          897 g          394 t
ORIGIN      
        1 gcggcccagc gccagcgagg cctcctccgt cacctccgcg tcctgcggca gcagggagac
       61 ccggcccagc ggggcgacgg cggcctggca ttgccggagc cgcgacagcg cgaggccctt
      121 cagcaccagc gcctcgtcca cgtacttgct gtcgggatgg cgggccacca gcgactcggc
      181 gcgggtgatc acctggcccc agagagtgtt ggcctcgaag gtgcgcccgt cgcgctccgc
      241 tttccgcgcc gagctggcga gccgcttggt gttgtacatc ccgttgtagt acacgcagcc
      301 gcccagcaga agggcgaccg cgaacagggc gagcgcacgc accggtctca ccgtccgcct
      361 ccggcgtcac ccccgccgac cttccgctca tagtcgcgca ggtactcgac gacggcgtcg
      421 gcgacggcga ccgccatctc ccgctggctc ttgcgagttg tcagcaggcg gccgtcctgc
      481 ggattggtgc tgtaccccag ctccaccaga atggccggcc ggcgcgcggt ggtgaggacc
      541 atgaaccccg cctgcttcac gccgcggtcc aatccggtat gggcggtccg gagcttcttc
      601 tgcaccagct cggcggcgcg ggcggactcg cggagatgct cgttcagttg gagatccttg
      661 aggatgaagt cgagaccggc ggccctcggc ccctcggact cgccggtctc gaatcgcacg
      721 gcgtcgttct ccatgcgggc cacccgcgcg gcgtcctccg tccgtgcctc ggccaggaag
      781 aaggtctcga agccccggac ctcggtgtag ccccgacggc gggcgagcga gttgacgtgg
      841 aggctcacga acaggtcgca ggcggcggtg cagaccgcgc cgcggtcgcc gagcgcgatc
      901 agcgtgtcgg tcgtgcgagt cattcgcact ccgacgccgc gcttctgcag ctcgtccctg
      961 agcagcagcc cgatctggag gaccacgtcc ttctcccgga cgccgcgggg aaagtacgtc
     1021 cccgggttgc cggggtccac gccgccgtgg ccgggatcga tggtcaccac gtggccgggc
     1081 cggagaccgc tgggcagacg ctgggccggt gcggaggccc gggccgccga cggccgcgcc
     1141 gcgatgtcct ccagccgggc cgcccgtgcg tcgtagcgat agcgctcgcc gagatagtag
     1201 ggaatgatct cggccacgaa ctggaaggga aggtagaccg tgtcccgcga ctgccagacg
     1261 ggattggcga gcgtgtgcac ctggctgctg aagaagaaga gcggggcgcc gaccaggaag
     1321 cgaaacggct gtcgggccac caccacctcg gcccagccgt cctgcacccg caccgcggcg
     1381 cccagcgcgg cggcgagctg gggcgccgag acgaccgggg caccggtggg gtccgcacgg
     1441 accggaatgg tggcgacgcc ccgcgcgccg gcgacggtga tctggcccgg tgcgaccgcc
     1501 gtcgccgccg ccagggcgag ggcggcgagc atcacgagtc cctcgccgcg cgggagagtc
     1561 cccgcgacac gtcccgggcc gcctcacgct cggacacccg ccgcttcagc gcctcccgct
     1621 tgtcatgcag cttcttcccc cgcccgaggg cgaggacgac cttggcccgc ccatccttga
     1681 agtagagctc cagcggcacc agggtgagcc cctgctgttc cacggacccg atcagcttcc
     1741 cgatctcgcg gcggtgcagg aggagcttcc ggctgcgcac cgggtcgtgg ttgtagcggt
     1801 tgccctgctc gtagggggtg atgttcatgc cctcgaggaa gacctcacca ttccggatcc
     1861 gggcgtaggc ctccttgatg gacgccttgc cgtttcgaag cgacttcacc tccgtcccgg
     1921 tcaggacgat cccggtttcc cacgtctcca ggatgtggta gtcgtgggtc gccttggggt
     1981 tcctggcgac cgacttacgg cgctcggcct ggggggagga atcggggctc acatggggat
     2041 cctaagcaaa ggataggcca ccacttcgga cgggtcaacg gcgcgggttg accgggttgc
     2101 gccgccgcac tagcttgcgc cacttcgccg aagtggtgga actggtagac gcgctgcgtt
     2161 cagggcgcag tgggcgcaag cccgtgcggg ttcgagtccc gccttcggca cgtggtatgg
     2221 gcggtaaggc ggtaaggcgt aggctgactc ccagaagaga cgaccctccg gtgtccaaga
     2281 gacatcggag ggtcgtctgt tttgcggaac aacctaccgc cgtaccgccc taccgcctta
     2341 ccgccttacc gccttaccgc cttacgctag tacctcgcca ttcccggctc gatccggctc
     2401 gcccaggcat ccacgccgcc cgccaggctc cgcaccttcc cgaagcccgc gccccgcagg
     2461 atctccagcg ccttcatcga gcgggagccc ttgtggcagt aggtcacgat ctcggcgtgg
     2521 ccgtcgagct cgccgagccg gtcggggagc tggccgaggg ggatgaggcg ggcgcc
//
LOCUS       DASUYN010000546         2967 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1057347, whole genome shotgun sequence.
ACCESSION   DASUYN010000546 DASUYN010000000
VERSION     DASUYN010000546.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2967)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2967)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2967
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1057347"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2380
                     /locus_tag="VF061_10685"
     CDS             <1..2380
                     /locus_tag="VF061_10685"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX6670017.1"
                     /translation="DRLRREKQLPVDEAVRIATEVASALDYAHRHGVVHRDIKPENIL
                     LHDGQALVADFGIALAASKASGARMTETGMSLGTPHYMSPEQAMGEREISARSDVYAL
                     GAMLYEMLTGDPPFTGSTAQAIVARVLTEAPRPIVPQRHTIPPYVEAAVLTALEKLPA
                     DRFATAAEFADALAGRNYVPTVPSPASPTARPVAVSARRRDPVTLALLGVAAIATAAA
                     LWGWLRPAPAPTVNRFSLFFPPDQALQPVTQSGNRVAISPDGKRLVYVGPAERGGRLW
                     LREHDQLGSTPIAGTEGAGTPFFSPDGRHVGFLVSGTNLKTVSLDGGPVLTLTDSANS
                     TGGAWGPDGYVYFEVDSGVARMKSSGGPPELIYNAIKRNEVGAEWPVLLPRASGIVFR
                     TRRANQAATDFQIVAMKLPAGEPKVLMRGVYARYSPTGHLLVATADGKLLAVPFDPDE
                     LEVTGSPIGLLEGIGVEGSGFSINLGLSDNGTLVYTTGGATGSRRPVWVNRDGVENPV
                     DPAWQPQGVISNFALSPDGKALAVDVVQNDINAVWVKQLPAGPYSRLTFGDSSNMRPT
                     WSADGRSIVYLAEVTNIGGTPRMRRADGTGNVQALLPPNSIWGQAIQTRDGRWLVLRT
                     SIFQPGRGNIYGVRMGDTTLAPLADGPAFEGKAAVSPDGRWLAYASEESGVFEVYVRP
                     FPDAGSARWQVSPAGGTDPVWSRNGRELFYISAANEMMSVEVAPGATFTITQPRRLFP
                     TGPYSAIPAVPSFDVHPDGTRFLMLRETTPTDRNELIVVQNWVEEMKGKTGR"
     gene            2599..2916
                     /locus_tag="VF061_10690"
     CDS             2599..2916
                     /locus_tag="VF061_10690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670018.1"
                     /translation="MYATIRRYTPKGTWDRKSRDELKGRIESGFLPMVQEIKGFHSYF
                     VVDVGEKEIVSIGIFENRTGAEESTRRAAEFVKQDPMSDRLGRPEIMEGDLLVSREAP
                     VTA"
BASE COUNT          457 a         1010 c         1074 g          426 t
ORIGIN      
        1 cgaccggctt cggcgggaga agcagctccc ggtggacgag gccgtccgca tcgcgaccga
       61 ggtcgcttcg gcgctcgact atgcgcaccg gcacggcgtg gtgcaccgcg acatcaagcc
      121 ggagaatatt ctgctgcacg acggccaggc cctggtggcc gacttcggca ttgcgctcgc
      181 ggcgagcaag gcgagcggcg cgcgcatgac cgagaccggc atgtcgctcg gcacgccgca
      241 ttacatgtcg ccggagcagg cgatgggcga gcgcgagatc agcgcccgct cggacgtgta
      301 cgccctgggc gcgatgctct acgagatgct gaccggcgac ccgcccttca ccggctcgac
      361 cgcacaggcg atcgtggccc gtgtgctcac cgaggcgccg cgcccgatcg tgccccagcg
      421 tcacaccatc ccgccgtacg tcgaggcggc cgtgctgact gcgctggaga agctgccggc
      481 cgaccgcttc gcgaccgcgg cggagttcgc ggatgcgctc gcggggcgga actacgtgcc
      541 gaccgtccct tcccccgcgt ctcccacggc gcgcccggtg gccgtgagcg cgaggcgccg
      601 cgatcccgtc accctcgcgc tcctcggcgt tgccgcaatc gcgaccgcgg ccgcgctctg
      661 gggctggctc cgcccggcgc ccgctcctac ggtcaaccgg ttcagcctct tcttcccgcc
      721 ggaccaggcg ctgcagccgg tgacgcagtc gggcaatcgg gtggcgatct cgccggacgg
      781 gaagcgcctg gtgtacgtgg ggccggcgga gcgcggcggg cggctctggc tccgggagca
      841 cgaccagctc ggctccacgc cgatcgcggg gaccgaaggt gccggcacgc cgttcttctc
      901 tcccgacggc cgccacgtcg gtttcctggt gagcggcacc aacctcaaga ccgtgtcgct
      961 ggatggcgga ccggtgctca ccctcaccga cagtgcgaac tcgaccggcg gcgcctgggg
     1021 accggacggg tacgtctact tcgaggtgga ctccggcgtg gcgcgcatga agtcgtccgg
     1081 cggccccccc gagctgatct acaacgcgat caagcggaac gaggtcggcg cggagtggcc
     1141 ggttctcctg ccgcgcgcct ccgggatcgt cttccgaacc cgccgcgcga accaggcggc
     1201 cacggacttc cagatcgtgg cgatgaagct ccccgccggc gagccgaagg tgctgatgcg
     1261 gggcgtctat gcccgctact cgcccacggg acacctcctg gtcgcgacgg cggacggcaa
     1321 gctcctggcc gtgccgttcg accccgacga gctggaagtg accggctcgc cgatagggct
     1381 gctcgagggg atcggagtcg aaggcagcgg gttttccatc aacctcggac tgtcggacaa
     1441 cggcacgctg gtgtacacca ccggcggcgc caccgggtcc cgccgcccgg tgtgggtgaa
     1501 ccgggacggg gtcgagaacc cggtggaccc cgcctggcag ccgcaggggg tgatctccaa
     1561 cttcgccctg tcgcccgatg gtaaggcgct ggcggtggat gtggtgcaga acgacatcaa
     1621 cgccgtctgg gtcaagcagc tgccggcggg cccctacagc cgcctgacgt tcggtgacag
     1681 cagcaacatg cgcccgacct ggtcggccga cggccgctcg atcgtctacc tggccgaggt
     1741 gaccaacatc ggcggcacac ccaggatgcg ccgcgcggac ggcaccggga acgtgcaggc
     1801 gctgctccct cccaactcga tctgggggca ggcgatccag acccgggacg ggcgctggct
     1861 ggtactgcgg acttcgatct tccagccggg caggggcaac atctacggcg tgcggatggg
     1921 agacacgacc ctcgccccgc tcgcggacgg ccccgcattc gaggggaagg cagcggtgtc
     1981 gcccgacggg cggtggctgg cctacgcgtc ggaggagtcg ggagtgttcg aggtctacgt
     2041 gcggcccttc cccgacgccg gctcggctcg gtggcaggtc tccccggcgg gcgggaccga
     2101 cccggtgtgg tcgcggaacg ggcgcgagct gttctacatc agcgcggcga acgagatgat
     2161 gagcgtagag gtggcgccgg gcgcgacgtt caccatcacc cagccgaggc ggctgttccc
     2221 gaccggaccg tacagcgcga tcccggcggt cccgtcgttc gacgtgcacc cggacggcac
     2281 ccgcttcctg atgcttcggg agacgacccc gacggaccgc aacgagctga tcgtggtgca
     2341 gaactgggtc gaggagatga agggcaagac cgggcgctga gccactctct tgacgggcag
     2401 tgttcgatct ccaatactag ggacctctca gatgctttga accccggcgc agtcccgtct
     2461 ggtcgcccag gcgccgggtg gagcgaatcg cgaaaccggc tgagcatgga cctgctccgc
     2521 cggttttccg cgtctatggc gtgcggcggc ggggcgatgg tccgcggggc ggcggacgcc
     2581 cacggaatgg agggaacgat gtacgcaacg atacggcggt ataccccgaa ggggacgtgg
     2641 gaccggaagt cccgggacga gctcaaggga cggatcgaga gcgggttcct cccgatggtc
     2701 caggagatca agggcttcca ttcgtacttc gtggtggatg tgggcgagaa ggagatcgtc
     2761 tcgatcggca tcttcgagaa ccggaccggt gccgaggagt ccacccggcg ggcggcggag
     2821 ttcgtgaagc aagacccgat gagcgaccgg ctcggccgcc cggagatcat ggagggcgac
     2881 ctgctggtgt cgcgggaggc gccagtcacg gcatgaccgc gctcgcagga ccgagcgcga
     2941 tgcaggaccc cagcgaaggg ctgtccc
//
LOCUS       DASUYN010000547         6931 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1499047, whole genome shotgun sequence.
ACCESSION   DASUYN010000547 DASUYN010000000
VERSION     DASUYN010000547.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6931)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6931)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6931
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1499047"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(7..1359)
                     /locus_tag="VF061_10695"
     CDS             complement(7..1359)
                     /locus_tag="VF061_10695"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: protein motif:HMM:NF006696.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HEX6670019.1"
                     /translation="MHPLTLRDAALFTDLYELTMAAAFHREGMRETATFSLFARRLPP
                     SRAFIVAAGLEDALEYARGLHFTPDAIDYLRSLGRFEPEFLAYLATLRFTGEIRAVPE
                     GTVMFPDEPLLEVTAPVIEAQLLESALLNACHLQSVLASKAARVVLAAHGVDLAEFGL
                     RRSHGTDAALKAARCAWLAGFGSTSNVLAGRTYGIPVSGTMAHSFVTAFGDELEAFRA
                     YARVFPDSAVLLIDSYDTIEGARKAVTVAHELAARGHPLRGVRLDSGDLLALSRAVRR
                     ILDEAGLPGVRIVVSGGLDEHDIEDLLAAGAPVDSFGVGTRLNVSADAPSLDLVYKLV
                     RYGDRDVLKLSEGKETWVGAKALYRTRGANGKIAGDVLALEDEVPPPGAGASLLQPVL
                     QDGEPLRSPPTLAEVRRHCAAQLAALPEGLRRLRDHAGYTVRASPGLEVRQERATSTF
                     "
     gene            complement(1404..2051)
                     /gene="pdxH"
                     /locus_tag="VF061_10700"
     CDS             complement(1404..2051)
                     /gene="pdxH"
                     /locus_tag="VF061_10700"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: protein motif:HMM:NF004231.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HEX6670020.1"
                     /translation="MTPPLSIADLRREYARARLDETDVSPDPFAEFARWFAEAQAAEA
                     AEANAMVLATASPDGRPSARMVLLKGFDERGFVFFTDYRSRKGEELEANPYAALAFHW
                     GELERQVRIEGTVTRTSPEESDLYYRTRPLGSRLGAWVSHQSRTIASREVLEAKLREV
                     EQRFDGRDLPLPPHWGGYRVRPECFEFWQGRESRLHDRIRYLREGEGWRIGRLSP"
     gene            2162..3067
                     /locus_tag="VF061_10705"
     CDS             2162..3067
                     /locus_tag="VF061_10705"
                     /inference="COORDINATES: protein motif:HMM:NF021982.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PHB depolymerase family esterase"
                     /protein_id="HEX6670021.1"
                     /translation="MPLCRALLVGALAVSASTPLPAQVRADEGRRSLEVAGVRRSYLL
                     YLPPSHQPGTPLPLLFVFHGGGGDAAGIAAHTGLTQAAGARGYAVVYPDGMRGYWNDG
                     RGARAGQDDVGFIRVLLDSLRAGLPADPRRIYATGISNGAGLAFRLACDLPGAFAAIA
                     PVAGALAAELEQRCGAAAPVSVVMYQGTADRLMPYDGGDLSSSRGSVLAATSTAALFA
                     RVNGCAGGPRVTAEPDTVRDGTRVLRSVYGGCRDGREVVLFTIEGGGHTWPGGPPVGR
                     SVGRVTRDLQANPTMLDFFDRHPAP"
     gene            3084..3863
                     /locus_tag="VF061_10710"
     CDS             3084..3863
                     /locus_tag="VF061_10710"
                     /inference="COORDINATES: protein motif:HMM:NF015000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HEX6670022.1"
                     /translation="MNPLLDPDARVVIAHRGASAEAPENTLPAFEAAVRHGADSIELD
                     VRLTADGAPVVIHDDILDRTTDRTGPVAALTLAELRAVDAGWSFTPDGGRTHPFRGGE
                     VRIPTLGEVLWAFPRLTVLVEIKEPAAQEAVRRVLLQEEAAERCAVASEYREALLAFD
                     QPPFARGASSPEISALYWAAMLRRPRPAAGYRLLSVPLRHRGVPVPTRGFIAAARASG
                     CPVHVWTVDSPDTARRLWRRGVSGIVTNVPGTMVEARRSLG"
     gene            complement(3860..4750)
                     /locus_tag="VF061_10715"
     CDS             complement(3860..4750)
                     /locus_tag="VF061_10715"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HEX6670023.1"
                     /translation="MAATAQVAPVTPIEKRGYAHPEMLVSTDWVAQHLKDPKVRLVES
                     NEDILLYDTGHIPGAVKVDWTSDLNDALTRDYIDRERLQKLLRSKGISDDTTIVFYGD
                     KNNWWATYALWVLQLFGLKNVKVMDGGRLRWVDEGRPLSTESPSYPAGNITVGERDDS
                     RIRAFRDEVLEHQKKRGQLVDVRSPEEYSGQKTHMPEYPQEGCLRGGHIPGAKSIPWA
                     KAVDPETHTFKSAEELRKLYQGDNGLKQDQETIAYCRIGERSSHTWFALTYLLGFDKV
                     RNYDGSWTEWGNAVRLPIER"
     gene            complement(5078..5710)
                     /locus_tag="VF061_10720"
     CDS             complement(5078..5710)
                     /locus_tag="VF061_10720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670024.1"
                     /translation="MDEEPAAPETPESLPTVRDALIGLAIGLGLLYLGTWFSSWWLRW
                     PTIGLGVLFVLVMPGYIIADSWQGLSGPAKRVASRVRGHVRTDPQLGTLFRNVEAGAW
                     EGAFASANGTIRLLIDGKDEPAPALVARAREVVAEFPALERRVDEYLARAAAEDAELA
                     PEIAALRISQLHFSWLERPDEVEIVFEIGPNEKYWTCTYAGGELKDLAFD"
     gene            complement(5760..6563)
                     /locus_tag="VF061_10725"
     CDS             complement(5760..6563)
                     /locus_tag="VF061_10725"
                     /inference="COORDINATES: protein motif:HMM:NF012760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016742 - hydroxymethyl-, formyl- and
                     related transferase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formyltransferase family protein"
                     /protein_id="HEX6670025.1"
                     /translation="MKPGGGLDVVLFTSNLMGIEVAAAVAALDEVRSLQVVTTSLPRP
                     GTVLARLRKTYRYFGPAGLVTSIRARLPRPLAAAPAPSLPDEIARRLPSATHLHYPDL
                     HAPECLERLRSLRPDLGIVFACYRLHRSLFALPRLGTLNLHLGKAPEFRGSSPGFYEL
                     LAGVPEIGVTVHRVDDGLDSGPILLQRTFPLEPAPPGDPIRYLGALQREVLIPAGAAL
                     MADAVRLEARGEAVELPQAPAGGRPRRRATWAQQRELRRVVAARRPSAD"
     gene            complement(6560..>6931)
                     /locus_tag="VF061_10730"
     CDS             complement(6560..>6931)
                     /locus_tag="VF061_10730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670026.1"
                     /translation="ARRQAMLPAYAASALALNLGLGTLALVAGAGLEGAAAAALAGYL
                     LFAAAMLRLNARLSGILQPDRLTVRALRPLVWCAAAVTVAGHVAAALGEHAAAIGIYL
                     LLVLPLLPRCRGEWRRLQGER"
BASE COUNT          969 a         2466 c         2485 g         1011 t
ORIGIN      
        1 cgtccgctag aaggtgctgg tagcgcgctc ctgcctcacc tcgagccccg ggctggcgcg
       61 cacggtgtac ccggcatgat cccgcaaccg gcgcagcccc tcgggcagcg ccgcgagctg
      121 tgccgcgcag tgccgacgca cctcggccag cgtcggaggt gaccgcagcg gctcaccgtc
      181 ttgcagcacc ggctggagca gcgacgcccc agcgccgggt ggcggcacct cgtcctccag
      241 tgccaggaca tcgccggcga tcttcccgtt cgcgcccctc gtgcggtaga gtgccttcgc
      301 ccccacccag gtctccttcc cctcgctcag cttgagcacg tcgcggtcgc cgtagcgcac
      361 gagcttgtag accagatcca gtgacggcgc gtcggcggag acgttcaggc gggtgccgac
      421 gccgaacgag tccacgggcg ccccggcggc gagcaggtcc tcgatgtcgt gctcgtccag
      481 tcccccgctg acgacgatgc gcacgccggg cagcccggcc tcgtccagga tccgtcgcac
      541 cgcccggctc agggccagga gatcgccgct gtcgagccgc actccgcgca gcgggtgccc
      601 gcgggcggcg agctcgtgcg cgaccgtgac cgctttccgc gcaccctcga tcgtgtcgta
      661 gctgtcgatc aggagcaccg ccgagtcggg aaagacgcgg gcgtaggcgc ggaaggcctc
      721 cagctcgtcg ccgaaggccg tgacgaacga gtgggccatc gtgcccgaga ccggaatgcc
      781 gtaggtgcgg ccggcgagga cgttgctggt ggagccgaac cccgccagcc aggcgcagcg
      841 ggccgccttg agcgcggcgt cggtcccgtg gctccgccgc aggccgaact ccgccaggtc
      901 caccccatgt gccgccagga cgacccgcgc ggccttgctg gcgagcacgc tctggagatg
      961 acaggcgttc agcagcgccg actcgagcag ctgggcctcg atcacgggcg ccgtcacctc
     1021 gagcagcggc tcgtcgggga acatgacggt gccttcgggc accgcgcgga tctccccggt
     1081 gaagcggagc gtggcgagat acgccaggaa ctcgggctcg aagcgcccca gcgacctgag
     1141 gtagtcgatg gcgtcgggcg tgaagtggag gccgcgggcg tactccagcg cgtcctccag
     1201 gccggccgcc acgatgaacg cgcgcgacgg cggcagccgc cgggcgaaga gactgaacgt
     1261 ggccgtttcg cgcatgccct cgcggtggaa ggcggcggcc atcgtgagct cgtagaggtc
     1321 ggtgaagagc gccgcgtcac gcagggtcag cgggtgcatg cccatctcgg ggtgtgcgcc
     1381 ggtatcgggt acggtggtag ccgtcagggc gacagccgcc cgatcctcca cccctctccc
     1441 tcccgcaggt accggatccg gtcgtgcagc cggctctccc ggccctgcca gaactcgaag
     1501 cactcgggac gcacccggta cccgccccag tgtggcggca ggggaaggtc ccggccgtcg
     1561 aagcgctgct cgacctcgcg cagcttggcc tcgagcacct cgcgtgaggc gatggtccgg
     1621 ctctggtggg agacccacgc gcccagccgg ctacccagcg gacgagtgcg atagtacagg
     1681 tccgactcct cgggcgaggt gcgcgtcacc gtcccctcga tcctgacctg gcgctccagc
     1741 tcaccccaat ggaacgccag ggccgcgtac gggttcgcct ccagctcctc gcctttccgg
     1801 ctgcgataat cggtgaagaa gacgaagccg cgctcgtcga atcccttgag caggaccatg
     1861 cgggcggagg gcctgccgtc gggagaggcc gtcgccaaga ccatggcgtt cgcttccgcg
     1921 gcctccgccg cctgcgcctc cgcgaaccag cgggcgaact cggcgaaggg atcggggctc
     1981 acgtccgtct cgtcgagccg ggcgcgagcg tattcccggc ggagatcggc gatggagagc
     2041 ggcggcgtca tccggagctc gaggtgggga tcggtcgtat gtatactcgc ggcggggaga
     2101 aaagtcgccc cggcggcggt tgtggcgtgc cggggagcgg gcttagagtc cggaaatgcc
     2161 gatgcccctg tgtcgagctc tcctcgtggg tgcccttgcg gtctccgcct ccacgccgct
     2221 tccggcgcag gtgcgggccg acgaggggag gcggtcgctc gaggtggccg gcgtcaggcg
     2281 ctcctatctg ctgtaccttc ccccctcaca tcagcccggc acgccgctgc cactgctctt
     2341 cgtgttccat ggcggcggcg gcgatgcggc gggcatcgcg gcccacaccg gcctcaccca
     2401 ggccgccggc gcgcgcgggt acgcggtggt ctatcccgac ggaatgcgcg gctactggaa
     2461 cgacggccgc ggagcgcgcg ccgggcagga cgatgtcggc ttcatccggg tcctcctcga
     2521 ctcgcttcgc gccgggctcc cggccgatcc acggcggatc tacgccaccg gtatctccaa
     2581 cggcgccggt ctagcgttcc gcctcgcgtg cgacctgccg ggagccttcg ccgcgatcgc
     2641 gccggtggcc ggcgcactgg cggccgagct ggagcagcgg tgcggcgccg ccgcaccggt
     2701 ctccgtcgtc atgtaccagg gcacggcgga tcgcctgatg ccgtacgacg gcggcgatct
     2761 cagctcgagc cggggttccg tgctcgcagc gacaagcacg gccgcgctgt tcgcccgggt
     2821 caacggctgc gccggcgggc cgagggtcac cgcggagccc gacaccgtca gggatgggac
     2881 tcgggtgctc cgctcggtct acggcgggtg ccgcgacggg cgggaggtcg tgctcttcac
     2941 gatcgagggc ggcgggcaca cctggcccgg cggtcctccc gtggggcggt ccgtgggacg
     3001 agtcacccgc gacctccagg cgaacccgac catgctcgac ttcttcgacc ggcatcccgc
     3061 cccttgagcc gggtgcccgc acggtgaatc cgcttctcga cccggacgcg cgggtggtca
     3121 tcgcccaccg gggcgcctcg gcggaggcgc cggagaacac cctgccggca ttcgaagccg
     3181 cggtccgcca cggcgcggac tcgatcgagc tcgacgtacg gctcaccgcc gacggcgcgc
     3241 cggtggtcat ccacgacgac atcctcgacc gcaccacgga ccggaccggg ccggtggccg
     3301 ccctcaccct cgccgagctg cgggcggtgg acgcggggtg gagcttcaca cccgacggcg
     3361 gccgcaccca tccgttccgc gggggggagg tgcggatccc cacgctgggc gaggtgctct
     3421 gggcctttcc gaggctgacg gtcctggtgg agatcaagga gccggcggcg caggaggcgg
     3481 tgcgccgggt gctgctgcag gaggaggcgg cggagcgctg cgcggtcgcg tcggagtatc
     3541 gggaggcgct gctggccttc gaccagccgc cgttcgcgcg cggcgcctcg agccccgaga
     3601 tctcggcgct ctattgggcg gcgatgctcc ggcggccccg gccggcggcc gggtaccgcc
     3661 tgctctcggt accgctccgg caccggggcg tcccggtgcc caccaggggc ttcatcgccg
     3721 ctgcgcgggc gagcggctgc ccggtgcatg tctggacggt ggactccccg gacaccgcgc
     3781 gccggctgtg gcgtcgcggt gtctcgggga tcgtcaccaa cgttccggga acgatggtgg
     3841 aggcgagacg gtccctgggc tagcgctcga tcggcagccg caccgcgttg ccccactcgg
     3901 tccaggagcc gtcgtagttc cggaccttgt cgaagccgag caggtaggtc agcgcgaacc
     3961 aggtgtggga cgagcgctca ccgatccggc agtacgcgat cgtctcctgg tcctgcttca
     4021 gcccgttgtc tccctggtac agcttccgca gctcctcggc cgacttgaag gtgtgggtct
     4081 cgggatccac cgccttggcc cacgggatgc tcttggcgcc cgggatgtgg ccgccgcgga
     4141 ggcagccctc ctgcgggtac tcgggcatgt gggtcttctg gccgctgtac tcctccgggc
     4201 tccggacgtc caccagctgg ccccgcttct tctggtgctc gagcacctcg tcgcggaagg
     4261 cgcgaatccg gctgtcgtcg cgctcgccca cggtgatgtt gcccgcggga tacgagggcg
     4321 actcggtcga cagcggccgg ccctcgtcca cccagcgcag ccggccgccg tccatcactt
     4381 tcacgttctt gaggccgaac agctggagca cccacagcgc gtaggtggcc caccagttgt
     4441 tcttgtcccc gtagaagacg atcgtggtat cgtcgctgat ccccttcgag cgcagcagct
     4501 tctgcagccg ctcgcggtcg atgtaatccc gggtgagcgc gtcgttgagg tcggaggtcc
     4561 agtcgacctt gaccgcgccg gggatgtgcc cggtgtcgta gagcaggatg tcctcgttcg
     4621 actcgaccag ccggaccttc gggtccttca ggtgctgcgc gacccagtcg gtcgaaacca
     4681 gcatttcggg atgggcgtac ccccgcttct cgatgggggt gactggtgcc acctgggcgg
     4741 ttgccgccat gtgtctgcct ccttgtcctg cgttcgatgg gtttcgagcc gtcgccaggc
     4801 ccgaaacgaa aaccggccgc gtcccgacgg ggggagcggc cggccgggac cagtttcccg
     4861 acgcctaggg cagcgaagct gcccgccggc cgcgatctcg gcgggcgcag caacagcgct
     4921 tcatgcggac ggactcgttc gcgacgaacg gcatcgggcg ctcggattgg ggtagtcgtc
     4981 taacttaggg ctggtttccg gagggtgtca acccgggttc gcctgccggt agtgtcccac
     5041 tcggggctgt gccatgcggc gacctggttt cgcccgatca gtcgaacgcc agatccttca
     5101 gctcgccgcc ggcgtacgtg caggtccagt acttttcgtt cggcccgatc tcgaacacga
     5161 tctcgacctc gtcgggtcgc tccagccagc tgaaatgcag ctgcgaaata cgcagcgcgg
     5221 cgatctccgg ggcgagctca gcgtcttcgg ccgcggcccg ggcgaggtac tcatcaactc
     5281 gacgctcgag tgccggaaac tccgcgacga cctcacgcgc gcgggcgacg agcgccggcg
     5341 caggctcgtc cttgccgtca atgaggagcc ggatggttcc gttcgctgat gcgaaggcac
     5401 cctcccacgc cccggcctcg acgttgcgga acagcgtccc gagctgcgga tccgttcgga
     5461 cgtggccgcg cacccggctc gccacccgct tcgccggacc cgatagcccc tgccagctgt
     5521 ccgcgatgat gtatccgggc atcacgagca cgaacagcac cccgaggccg atggtcggcc
     5581 agcgcagcca ccaggacgaa aaccaggtac ccagatagag cagtccgaga ccgatcgcaa
     5641 ggccgatcaa cgcgtcacga actgtgggaa ggctctccgg ggtctccgga gcggccggct
     5701 cttcgtccat tgtagtcacc agcgtccgcc cttcgtcgcg caagggtgcc ttcggtgcgt
     5761 cagtccgcgg agggacgccg cgcggcgacg acccgccgga gctcgcgctg ctgggcccag
     5821 gtggcccggc ggcgggggcg tccgccggcc ggcgcctgtg gcagctccac cgcctctccc
     5881 ctcgcctcca atctcaccgc gtccgccatc agcgcggcac cggcgggtat cagcacctcc
     5941 cgctggagcg ccccgaggta acggatcgga tcgccgggcg gagcgggttc gagcgggaag
     6001 gtgcgttgca gcaggatcgg gccgctgtcg agcccgtcgt ccacccggtg aaccgtcacc
     6061 ccgatctcgg gcacacccgc cagcagctcg tagaagccgg gggacgagcc gcgaaactcg
     6121 ggggccttgc ccaggtgcag gttgagcgtg ccgagccggg ggagggcgaa gagcgaccgg
     6181 tgcagccggt agcaggcgaa cacgatcccg agatccggcc gcagcgagcg gaggcgctcc
     6241 aggcactccg gcgcgtggag gtcgggataa tgaagatggg tcgccgaggg cagccgtcgg
     6301 gcgatctcgt cgggcagact cggggcgggg gccgcggcaa gcggacgcgg cagccgggcg
     6361 cggatggacg tcaccagccc ggcgggcccg aagtagcgat acgtcttgcg caggcgcgcc
     6421 aacaccgtcc ccggtcgcgg gagggatgtg gtgacgacct gcagcgagcg gacctcatcc
     6481 agtgcggcca cggcggcagc cacctcgatg cccatcagat tcgaggtgaa caggacgacg
     6541 tcgaggccgc ccccgggctt caccgctcgc cctgaagccg ccgccactcc ccccggcagc
     6601 gcggcagcag gggcaggacg aggaggagat agatgccgat ggcagccgcg tgctctccca
     6661 gcgccgcggc gacgtgcccg gcgacggtga ccgcggcggc gcaccagacc agtgggcgaa
     6721 gcgcccggac ggtgaggcgg tccggctgca ggatcccgct gagcctggca ttgagccgca
     6781 gcatcgccgc ggcgaacagc aggtatcccg cgagcgccgc cgcggccgcg ccctcgagtc
     6841 ccgcaccggc gaccagcgcg agtgtaccga gccccagatt gagcgcgagc gcgctcgcgg
     6901 cgtaggcggg cagcatcgcc tggcgccgcg c
//
LOCUS       DASUYN010000548         2052 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_173794, whole genome shotgun sequence.
ACCESSION   DASUYN010000548 DASUYN010000000
VERSION     DASUYN010000548.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2052)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2052)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2052
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_173794"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..338
                     /locus_tag="VF061_10735"
     CDS             <1..338
                     /locus_tag="VF061_10735"
                     /inference="COORDINATES: protein motif:HMM:NF017024.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate
                     reductase [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="dihydrodipicolinate reductase C-terminal
                     domain-containing protein"
                     /protein_id="HEX6670027.1"
                     /translation="AHFAGRPEFEAFILEEHHATKRDAPSGTAGVLRARARETDPARE
                     CAITSVRAGSIPGTHVLTFDGPHETISLSHVARSRKGFAAGALAAAEWLPGRSGVHDF
                     ETMLFGGSG"
     gene            335..1219
                     /gene="dapA"
                     /locus_tag="VF061_10740"
     CDS             335..1219
                     /gene="dapA"
                     /locus_tag="VF061_10740"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: protein motif:HMM:NF012904.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HEX6670028.1"
                     /translation="MTRLQGCGTALVTPFGERGEVDYPALRALVEWQIAEGIDFLVPC
                     GSTGEAQTLDDAERERVVTMVVETSAGRVPVMAGASSNDTRRAVAEARRMCRVGADYI
                     LTATPYYNKPGQGGLYRHFSAVADASPKPICLYNVPGRSAVNLQPAVTLQLADHPNVM
                     GIKEASGDLAQIMQILRGRPERFSVLSGDDWLTLGVVAAGGDGLISVASNEMPGPVRA
                     MVALLLSGDLERAREWHYRLLPLMEANFLESNPAPVKAALALAGRIRNELRLPLVPVT
                     EKTRSTLAAVLKDLGVEI"
     gene            1219..>2052
                     /locus_tag="VF061_10745"
     CDS             1219..>2052
                     /locus_tag="VF061_10745"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: protein motif:HMM:NF008808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HEX6670029.1"
                     /translation="MPADVASLRDELERFAEGVPAGQEAAALQAFRALKGELNAGRVR
                     AAQRAADGRWHANAWVKAGILLGFRLGQVGPAATGGPFPFFDKDTYPLRALGPQDGVR
                     LVPGGSAIRDGCYLGRGVVCMPPMYVNVGAYVDHGTMIDSHALVGSCAQIGRRVHLSA
                     AAQIGGVLEPAGALPVVIEDEVLVGGNCGVYEGTVVRARAVLAPGTILTAGTAVVDLV
                     HDRIYRREGDRPLEIPSGAVVVPGTRPVRSGPGRDAGISLYAPVIVKYRDEKTDTAVR
                     LE"
BASE COUNT          281 a          716 c          764 g          291 t
ORIGIN      
        1 cggcgcattt cgcggggcgg cccgagttcg aagcctttat actggaggag catcacgcca
       61 ccaagcgcga tgcgccgtcc ggcaccgcgg gggtgctccg ggccagggcc cgcgagaccg
      121 accccgcgcg cgagtgtgca atcacgtccg tgcgggccgg gtccataccc ggcacccatg
      181 tgctcacctt cgacggcccg cacgagacga tctcgctcag ccacgtggcc cggagccgga
      241 aaggattcgc ggccggcgcc ctggccgcgg cggagtggct gccgggacgc tccggcgtcc
      301 acgacttcga gacgatgctc tttggaggga gcggatgaca cgcctgcagg gctgcggcac
      361 ggcgctggtc accccgttcg gcgagcgcgg cgaggtggac tatcccgcac tccgtgcgct
      421 cgtggagtgg cagatcgccg aaggcatcga cttcctcgtc ccctgcggct cgaccggaga
      481 ggcgcagacc ctcgacgacg ccgagcgcga gcgggtcgtg acgatggtgg tcgagacctc
      541 ggccggccgg gtgccggtga tggcaggggc gagcagcaac gacacccgcc gcgccgtcgc
      601 cgaggctcgc cgaatgtgcc gcgtcggcgc cgactacatc ctcaccgcca ccccctacta
      661 caacaagccc ggccagggcg gactctaccg ccacttcagc gccgtcgccg acgcctcccc
      721 caagccgatc tgcctctaca acgtgcccgg ccggtccgcg gtgaaccttc agccggcggt
      781 gaccctccag ctcgccgatc accccaacgt gatgggcatc aaggaggcga gcggcgacct
      841 cgcgcagatc atgcagatcc tccggggccg gccggagcgc ttcagcgtgc tctccgggga
      901 cgactggctc acgctcggcg tcgtggccgc cggcggcgac ggcctgatct ccgtggcctc
      961 caacgagatg cccggtcccg tgcgcgcgat ggtcgccctg ctgctctcgg gcgacctgga
     1021 gcgggcgcgc gagtggcact accggctgct ccccctgatg gaggccaact tcctggagag
     1081 caacccggcg ccggtgaagg cggcgctcgc gctggccggc cggatcagga acgagctgcg
     1141 gctgccgctg gtcccggtca ccgagaagac ccgctcgacg ctcgcggccg tcctgaagga
     1201 cctgggcgtg gagatctgat gccggcggat gtggcatcgc tccgggatga gctcgagcgg
     1261 ttcgccgaag gcgtgcccgc cggccaggag gccgcggcgc tgcaggcgtt tcgcgccctc
     1321 aagggggagc tcaacgccgg gcgggtgcgc gcggcgcaac gcgcggcgga cggtcggtgg
     1381 cacgccaatg cctgggtgaa ggcgggcatc ctcctgggct tccggctggg ccaggtcggc
     1441 cccgcggcga cgggtggtcc gttccccttt ttcgacaagg atacgtaccc cctccgtgcc
     1501 ctgggccctc aggacggcgt gcggctggtg ccgggggggt cggcgatcag ggacggctgc
     1561 tatctcgggc gcggcgtcgt ctgcatgccc ccgatgtacg tgaacgtcgg tgcctacgtg
     1621 gaccacggga cgatgatcga cagccatgcc ctggtgggct cctgcgcgca gatcggcaga
     1681 cgggtgcacc tctccgccgc cgcgcagatc ggcggggtcc tggagccggc cggcgcgctg
     1741 ccggtcgtga tcgaggacga ggtgctggtg ggcgggaact gcggcgtgta cgagggcacg
     1801 gtcgtgcggg cgcgggcggt gctggcgccc gggacgatcc tcaccgctgg cacggcggtg
     1861 gtcgatctgg tgcacgaccg catctaccgg cgggagggcg accgtccgtt ggagattccc
     1921 tccggcgccg tcgtggtacc gggcacccgg ccggtgcgga gcgggccggg cagagacgcg
     1981 gggatctccc tctacgcgcc ggtcatcgtc aagtatcggg acgagaagac ggatacggcg
     2041 gttcgcctcg ag
//
LOCUS       DASUYN010000549         4154 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1057606, whole genome shotgun sequence.
ACCESSION   DASUYN010000549 DASUYN010000000
VERSION     DASUYN010000549.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4154)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4154)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4154
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1057606"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1169)
                     /locus_tag="VF061_10750"
     CDS             complement(<1..1169)
                     /locus_tag="VF061_10750"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEX6670030.1"
                     /translation="MTSLGFVLRMAAREVRASPRRLLLLTASVAVGVAALVAINSFTA
                     NLRDSVRRQAQALLGADLSLESRQPLPPSAERLIDTLVGRGAEEARVTNFSAMGYVPR
                     TEGTRLVQVAAIRGGYPFYGEIRTDPAPAWSALQSGRHAVVDPSLLTALQARVGDTLA
                     LGEARFVISGTVASAPGNVGLRAAFGPRVYIPARYLEDTRLLGFGARAEYEAYLRLPD
                     GIAAQAIAGERGPTLRAERVRVRTVEDDRERLNETLSRLTGYLGLVALIALLLGGIGV
                     ASAVVVFIRQRLDTIAVLRCLGATGARVLAVYGAEAAGMALAGSLLGAVAGVLFQQAL
                     PGLLADLLPVDVETSMSWSAIGLGVGMGLWVALVFALFPLLGVRRVPPLAALRRD"
     gene            complement(1166..1834)
                     /locus_tag="VF061_10755"
     CDS             complement(1166..1834)
                     /locus_tag="VF061_10755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX6670031.1"
                     /translation="MLRCTSLTKTYRSGGRDLTVLNDITFQVEPGGFAAIVGPSGSGK
                     TTLLGLLAGLDRPSGGTVHLDGQELGALDEDARARMRGEKIGFVFQSFQLIPTLTARE
                     NIQVPLELRGQEASGRATDLLERVGLGDRGHHYPAQLSGGEQQRVALARAFSTGPKVL
                     FADEPTGNLDARTGAGIIDLMVELNRDLGTTLVLVTHDLDLAARARRTIRLADGRIVA
                     DSAA"
     gene            1842..2519
                     /locus_tag="VF061_10760"
     CDS             1842..2519
                     /locus_tag="VF061_10760"
                     /inference="COORDINATES: protein motif:HMM:NF012863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylesterase"
                     /protein_id="HEX6670032.1"
                     /translation="MISRYGWGGALVALALAGCGSEDGTRASEQAPATPAVGERGRVV
                     FLGTSLTAGLGLDPEQAFPALIQRKIDSAGLPFEAVNAGVSGETSAGARRRMDWVLRQ
                     PVSVLVIETGANDGLRGLEVDSLRANIQAIIDDARRLSPPPAIILTGMRAPPNLGFGY
                     ARRFREVYGDLAEANDVPLVPFLLDGVAGVPSLNQSDMIHPTAQGQQRMAEAVWEVLE
                     PVLKRAA"
     gene            complement(2503..3726)
                     /locus_tag="VF061_10765"
     CDS             complement(2503..3726)
                     /locus_tag="VF061_10765"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEX6670033.1"
                     /translation="MKRPADPAELARWRADTPGCERLVHLNNAGAALQPAPVRAAVQR
                     HLELEHELGGYEASEARMDELRGAYDAVGALLGASGRNVAMQQNSTVAFTQAFAAFDL
                     RPGDLILTSRADYASNQIMYLALSRRWGVEIVRAPDAPEGGIDPQAVRELVGRRRPTL
                     LALSWIPTNSGLVQPAEAIGEICHEAGVPYIVDACQAVGQMPIDVGRLHCDYLAAATR
                     KFMRGPRGLGFLYVSDRVLEAGAYPITVDMHGADWTAAEDFVLKPDARRFEGWEISHA
                     LVLGAGAAAAYALEVGIEQARDRSWALAAYARERLADAHGVRVLDRGPRLCAIATAEL
                     GGRNAEEVKHALRTRGINTSSPLREDAVIDMDEKRAASALRISPHYYNTAGEIDTAVA
                     ALAEVLEAVEPTRRA"
     gene            complement(3723..>4154)
                     /locus_tag="VF061_10770"
     CDS             complement(3723..>4154)
                     /locus_tag="VF061_10770"
                     /inference="COORDINATES: protein motif:HMM:NF019349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FCD domain-containing protein"
                     /protein_id="HEX6670034.1"
                     /translation="RLSPMEPAELREVGSILAALEPLALDQSAEPSADQLVRLGEVVR
                     RLEQTRGDIAACVELDDQFHGVLLESCPNGRLLRLAETLRRTLRRYLHSYLQRGGRVS
                     LSTLQHTRIADALRKGDRAGACQLLERKWRRGMDEIEGALR"
BASE COUNT          580 a         1489 c         1520 g          565 t
ORIGIN      
        1 tagtcccgcc gcagggcggc gagcggcggt acccgccgga cgcccagcaa ggggaacagc
       61 gcgaacacca gggccaccca gagccccatg cccacaccca ggccgatcgc gctccacgac
      121 atcgaggtct cgacgtccac cggcagcagg tcggcgagga ggcccggcag tgcctgctgg
      181 aagaggacgc ccgccaccgc ccccaggagg ctcccggcga gcgccatccc ggcggcctcg
      241 gcgccgtaca ccgcgagcac ccgggccccg gtcgcgccga ggcagcgcag cacggcgatg
      301 gtgtccaggc gttgtcggat gaagaccacg accgcgctcg ccacgccgat tcctcccagc
      361 aggagcgcga tcagcgccac caggccgagg tagccggtga gccgcgagag cgtctcgttg
      421 agccgctcgc ggtcgtcctc caccgtgcgt acccgcaccc gctcggctcg gagcgtcggt
      481 ccccgctccc cggcgatcgc ctgggcggcg atgccgtcgg gcagccgcag gtacgcctcg
      541 tactccgccc gcgcgccgaa gccgagcagc cgggtgtctt ccaggtagcg cgccgggatg
      601 tagacccggg ggccgaaggc ggcgcggagc cccacgttgc ccggcgcgct ggccaccgtc
      661 ccgctgatga cgaagcgcgc ctcgcccagc gccagggtgt ctcccacccg ggcctggagc
      721 gcggtgagca gcgaagggtc caccaccgcg tgccggccgc tctgcagggc ggaccaggcc
      781 ggtgccggat cggtccggat ctcgccgtag aaggggtagc cgccccggat cgccgccacc
      841 tgcaccagcc gggtcccctc ggtgcggggg acgtagccca tggccgagaa gttggtgact
      901 cgcgcctcct cggcccctcg tcccaccagg gtgtcgatca ggcgctcggc gctcggggga
      961 agcggctgcc ggctttccag cgagaggtcg gcgccgagca gcgcctgggc ctgccggcga
     1021 accgagtccc gcaggttggc ggtgaaggag ttgatcgcca ccagcgcggc gacgccgacc
     1081 gcgacggagg cggtgagcag caggagccgg cggggggagg cgcgcacctc gcgcgccgcc
     1141 attcggagca cgaaaccgag ggaggtcacg cggcgctgtc ggccacgatc cggccgtcgg
     1201 cgagccggat ggttcggcgg gcgcgggcgg cgaggtcgag gtcgtgggtg acgaggacca
     1261 gggtggtgcc gaggtcccgg ttcagctcca ccatgagatc gatgatgccg gccccggtgc
     1321 gcgcatcgag attgcccgtg ggctcgtccg cgaacaggac cttggggccg gtgctgaacg
     1381 cccgtgccag cgcgacccgc tgctgttccc cgccggaaag ctgggccggg tagtggtggc
     1441 cccggtcgcc gaggcccacc cgctcgagga ggtcggtggc tcgcccggac gcctcctggc
     1501 cccgcagctc gagaggtacc tggatgttct ccctcgcggt gagcgtaggg atcagctgga
     1561 aggactggaa cacgaacccg atcttctccc cccgcatccg ggcccgggcg tcctcgtcca
     1621 gcgcgcccag ttcctgcccg tcgagatgga cggtaccgcc gctcggacga tccaggccgg
     1681 cgaggagccc cagcagcgtg gtcttcccgc taccagaggg gccgacgatg gccgcgaacc
     1741 cgcccggctc cacctggaac gtgatatcgt tcagcaccgt gaggtcacgg ccgccggagc
     1801 gataggtctt ggtcagcgaa gtgcatcgga gcatggtctg aatgatatcc aggtacggat
     1861 gggggggcgc gctggttgcg ctggcgctcg ccggctgcgg ttcggaggat gggacacggg
     1921 cgtccgagca ggcgcccgcc acgccggccg tgggcgagcg gggccgcgtg gtgttcctgg
     1981 gaaccagcct caccgccggg ctggggctgg acccggagca ggcgtttccc gccctgatcc
     2041 agcggaaaat cgactccgcg ggcctgccgt tcgaagccgt gaacgcgggg gtgagtgggg
     2101 aaacctccgc cggcgctcgg cggcggatgg actgggtgct gcggcagccg gtctcggtgc
     2161 tggtgatcga gaccggcgcg aacgacgggc tccgcggcct ggaggtggat tcgctgcgcg
     2221 ccaacatcca ggccatcatc gacgatgcac ggcggctttc cccacccccc gcgatcatcc
     2281 tgaccggcat gcgcgcgccg ccgaacctgg gattcggcta cgctcgccgc ttccgggagg
     2341 tctacggcga cctggccgag gcgaacgacg tgccgctggt gcctttcctc ttggatgggg
     2401 tggcgggagt cccctcgctc aaccaatccg acatgatcca ccccacggcc cagggacagc
     2461 agcggatggc ggaggccgtc tgggaggtgc tggagccggt cctcaagcgc gccgcgtagg
     2521 ctccaccgcc tccaacacct ccgccagcgc cgcgacggcg gtgtcgatct cgccggccgt
     2581 gttgtagtag tggggtgaga tccggagggc cgacgccgcc cgcttctcgt ccatgtcgat
     2641 gaccgcgtcc tcgcgcagcg gcgagctggt gttgatgccg cgggtccgca gcgcgtgctt
     2701 gacctcctcc gcattccgcc cgcccagttc ggccgtcgcg atcgcgcaga gccttggacc
     2761 tcggtcgagc acgcgcacgc cgtgcgcgtc cgccagccgc tcgcgggcat aggcggccag
     2821 cgcccagctt cggtccctcg cctgctcgat gccgacctcc agtgcatacg ctgccgccgc
     2881 ccccgcgccg agcaccagcg catgcgagat ctcccacccc tcgaaccgcc tcgcgtcggg
     2941 cttgagcacg aagtcctcgg ccgcggtcca gtcggctccg tgcatgtcca cggtgatggg
     3001 gtacgccccc gcctcgagca cccggtcgga cacgtagaga aaccccaggc cgcggggacc
     3061 ccgcatgaac ttccgggtcg cggcggcgag gtagtcgcag tgcaaccggc ccacgtcgat
     3121 cggcatctgt cccaccgcct ggcaggcgtc cacgatgtac ggcaccccgg cctcgtggca
     3181 gatctcgccg atggcttcgg cgggctgcac caggccggag ttggtgggga tccagctgag
     3241 ggcgaggagt gtcgggcgcc ggcgtcccac cagctccctg accgcctgcg ggtcgatccc
     3301 gccctcgggc gcatccggcg cgcgaacgat ctccacgccc cagcggcgcg agagcgcgag
     3361 gtacatgatc tgattggagg cgtagtccgc ccggctggtg aggatcagat cgccggggcg
     3421 gagatcgaag gccgcgaacg cctgggtaaa ggcgacggtc gagttctgct gcatcgccac
     3481 gttgcgaccg gaggctccga gcagggcgcc gacggcgtcg taggctcctc gcagctcgtc
     3541 cattctggct tcggaggcct cgtacccgcc gagctcgtgc tccagctcga ggtgacgctg
     3601 caccgccgca cgcacgggcg cgggctggag cgcggcgccc gcattgttga ggtggacgag
     3661 gcgctcacaa cccggcgtgt cggcgcgcca gcgggccagc tcggccggat ccgccggccg
     3721 cttcaccgca gagcgccctc gatctcgtcc atgccccggc gccacttccg ctcgagcagc
     3781 tggcaggcgc cggcgcggtc gcccttgcgg agcgcgtcgg cgattctggt gtgctgaagg
     3841 gtcgagagac tcacgcgccc gccgcgctgg aggtaggagt gaaggtagcg gcgcagggtg
     3901 cggcgcaggg tctcggccag ccggaggagg cggccgttgg ggcagctctc caggagcacg
     3961 ccgtggaact ggtcgtcgag ctccacgcag gcggcgatgt ctccccgggt ctgctccagc
     4021 cgccggacga cctcgccgag gcggacgagt tggtcggcgg acggctcggc ggactggtcg
     4081 agtgccaggg gctccagcgc cgccagaatg gagccgacct cgcggagctc cgcgggctcc
     4141 atcgggctca gccg
//
LOCUS       DASUYN010000550         2207 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1718170, whole genome shotgun sequence.
ACCESSION   DASUYN010000550 DASUYN010000000
VERSION     DASUYN010000550.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2207
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1718170"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2171)
                     /locus_tag="VF061_10775"
     CDS             complement(<1..2171)
                     /locus_tag="VF061_10775"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX6670035.1"
                     /translation="MVELPRGTVTFLFTDIEGSTRLWEQDRAAMAAAVERHLALLDAA
                     IAAHGGIHFKTVGDGVQAAFPTAPQAVAAALDGQRALRAEDWRGVGELRVRLALHAGE
                     AEPDARGDYLAAPLNRLARLLAVGHGGQILLTQAVQQLTRGALAPGTAVRDLGEHRLR
                     DLLEPELVYQLLHPDLPADFPPLRSLEARPHNLPLQPTPFLGREREVGEVVALLRRPE
                     VRLLTLTGPGGTGKTRLALQVAAELLDDFADGVYFVPLAPLTDAALVPSAIASALAMR
                     DEADRSLPDRLKEVLAGQELLLVLDNVEHLVEAAPLIAELLSAAPGLKVLATSRVPLR
                     LRAEREYPVPPLGLPRRQPLPTLEELSQSEAMRLFLERAQAVKPDFALDDENAPAVAA
                     ICWRLDGLPLAIELAAARVRLLPPQALLARLEQRLPLLTGGARDAPARHRTLRDTIAW
                     SYDLLDPDDQRLFRRLAVFVGGCTLEAADAVTTPDGQRDVFGGIERLCEHSLLRQAEA
                     QGSEPRFAMLETVREFGLEQLAASGEEDLTWERHADHFATLGDNIEREFFFRPVPFLA
                     VLEVETDNLRAALGWAERGGRVETGLRLGLAFGSLAVRRGMLAEGREWLRRLLALGGG
                     APPLQARALTALGWYALVQGDTEGAMEAGKRAAETAAGESWILANALNLLGSVELERG
                     PSEAARRYFEEALALVEHHEEAAVWAPSILNNLGLLASISG"
BASE COUNT          334 a          820 c          765 g          288 t
ORIGIN      
        1 tcgccgctga tcgaagccag caggcccagg ttgttgagga tcgagggagc ccagacggcg
       61 gcctcctcgt ggtgctccac caaggccagc gcctcctcga agtaccgccg ggcagcctcg
      121 gatggtcccc gttccaactc cacgctaccc agcagattga gtgcattcgc caggatccag
      181 gactcccccg ccgcggtttc agctgcccgc ttccccgcct ccatggcccc ctcggtgtct
      241 ccctggacca gggcatacca gccgagagcg gtgagcgctc gcgcttgcag tggaggtgcg
      301 ccaccaccga gtgctagcag ccgccgcagc cactcccgac cttcggccag cattccgcgc
      361 cgcacggcaa gcgagccgaa ggcaagcccc aagcgcagcc cggtttcgac cctcccaccc
      421 cgctccgccc atccgagcgc cgctcgcagg ttgtcggtct cgacctccag cacggcgagg
      481 aacggcaccg gccggaaaaa gaactcccgc tcgatgttgt cgccaagcgt cgcgaagtgg
      541 tcggcgtggc gttcccaggt caggtcctcc tccccactcg ccgccagctg ctccagcccg
      601 aactcgcgca ccgtctccag catcgcgaag cgcggctcac tcccctgggc ctctgcctgg
      661 cgcagcagac tgtgctcgca caaccgctct atgccgccaa agacatcacg ctggccatcc
      721 ggggtggtaa ccgcgtccgc cgcctccagg gtgcagcccc cgacgaagac ggccaggcgg
      781 cggaacagcc tctggtcgtc gggatcgagc agatcgtagc tccaggcgat cgtatcgcgg
      841 agcgtgcggt gccgggctgg agcatcgcgg gcaccaccgg tcagcagcgg caagcgctgc
      901 tctagccgcg ccagcagcgc ctgcggggga aggagccgca cccgggccgc cgccagctcg
      961 atggccagcg gcaacccgtc caggcgccag cagatcgcgg cgaccgccgg ggcattctcg
     1021 tcgtcgaggg cgaagtcggg tttgacggcc tgggcccgct cgaggaagag gcgcatcgcc
     1081 tcggactggg acagctcctc cagcgtcggc agcggctgcc gtcgcggcag tcccagcggc
     1141 gggaccgggt actcgcgctc cgcccgcagg cgcagcggca cgcggctggt tgcgaggact
     1201 ttcagcccgg gggcggcgct gaggagctcc gcgatcagcg gggccgcctc cacgaggtgc
     1261 tcgacattgt ccaggaccaa gagcagctcc tggccggcca gcacctcctt aaggcggtcg
     1321 gggagggagc ggtcggcctc gtcgcgcatc gccagggcac tggcgatggc cgacggcacg
     1381 agcgccgcat cggtgagggg cgccagcggg acgaagtaga ccccatcggc gaaatcatcg
     1441 agcagctcgg cggccacctg aagggcgagc cgggtcttgc ccgtgccccc gggaccggtc
     1501 agcgtcagca ggcggacctc cggccggcgc aggagggcga ccacctcccc cacctcccgc
     1561 tcccgcccca gaaacggggt cggctgcagc ggcaggttgt gcgggcgggc ctccagcgac
     1621 cggagcggcg ggaagtcggc gggcaggtca ggatgcagga gctgatagac gagctcgggt
     1681 tccagcagat cccgcagccg gtgctcgccc aggtcgcgca ccgcagtgcc cggcgccagc
     1741 gcgccgcgcg tcagctgctg caccgcctgg gtcagcagga tctgcccgcc atgcccgacg
     1801 gcaagcagcc gcgctagccg gttgaggggg gcggcaagat agtcgccgcg ggcgtcgggc
     1861 tcagcttctc cggcgtgcag cgccaggcgc acccggagct ccccgactcc acgccagtcc
     1921 tcggcacgca gggcgcgctg cccatccagc gcggcggcga cggcttgcgg cgcggtcggg
     1981 aaggcggcct gcacgccgtc gccgacggtc ttgaagtgga tccccccatg cgccgcgatg
     2041 gccgcatcga gcagcgcgag gtggcgctcg accgcggccg ccatcgccgc gcgatcctgc
     2101 tcccacagcc gggttgatcc ctcgatgtcc gtgaagagga aggtgacggt gccgcggggg
     2161 agttcgacca cgatgtccgc tccgtgcctc gctcacgggt gcttcac
//
LOCUS       DASUYN010000551         2002 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_834070, whole genome shotgun sequence.
ACCESSION   DASUYN010000551 DASUYN010000000
VERSION     DASUYN010000551.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2002
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_834070"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(26..373)
                     /locus_tag="VF061_10780"
     CDS             complement(26..373)
                     /locus_tag="VF061_10780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HEX6670036.1"
                     /translation="MADCLFCRVVAGEIPATIVKRSEHAVAFRDIDPRAPTHVLVIPT
                     RHLPAVRDAGGAEDDALLGRVLRFAAEVATELGLDGGGYRIVTNTGKDAGQSVDHLHF
                     HVLGGRKLTWPPG"
     gene            complement(366..1058)
                     /locus_tag="VF061_10785"
     CDS             complement(366..1058)
                     /locus_tag="VF061_10785"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmE family RNA methyltransferase"
                     /protein_id="HEX6670037.1"
                     /translation="MIRVLVGRDGTLLEGEAHHLQVRRAEPGETVELRDGQGLVGRGT
                     LGRAGRAWSVEVTETRRVAPPAPTTLVVGAGDRDRFAWVVEKATELGVTAVIPLECER
                     TAGVATRVRSQHLDRLRRQALEAVKQSGAAWAARVEEPVPLSVLLQPAAGEARWLADA
                     EGRPAPQVVEDRPLTVVIGPEGGLTGAEREGLMDAGYAAVRLAPHTLRFETAAIAAAA
                     AAAAGRLRGSDG"
     gene            complement(1055..1885)
                     /locus_tag="VF061_10790"
     CDS             complement(1055..1885)
                     /locus_tag="VF061_10790"
                     /inference="COORDINATES: protein motif:HMM:NF018076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HEX6670038.1"
                     /translation="MTWWAIDVRTTPEERDRLGAWLVAKTGQAVEERDDGTLVTFAPD
                     EAAADALIAQLAREAAAPAATSRRRIEPVDWSTRWRDGLGARRFGRLTVTPSWAPAPG
                     GAGPTVVLDPETAFGSGEHGSTRVALALLERVLRPGDLVLDLGSGSGILAIAAVKLGA
                     ARAIGVEHDAEAHPVAVRNVERNGVADAVELLEGDAGDLAPLLGPADLVLSNILRSVN
                     TALLPTIAAALRPGGIAICSGMEVAEAPLFIPPLEAAGFLVEEELTDTGWWGVAARRR
                     "
BASE COUNT          246 a          817 c          680 g          259 t
ORIGIN      
        1 cttaccgcct taccgcctta ccgcctcacc ccggcggcca cgtgagcttc cggcccccca
       61 gcacgtgaaa gtgcaggtgg tccacgctct ggccggcgtc cttgccggtg ttggtgacga
      121 tccggtagcc gcccccgtcc aggcccagct cggtcgccac ctcggccgcg aagcggagca
      181 cccggcccag cagggcgtcg tcctcggccc cgccggcgtc gcgaacggcg ggcaggtggc
      241 gggtgggaat caccaggacg tgggtcggcg cccggggatc gatgtcgcgg aacgccaccg
      301 cgtgctccga gcgcttcacg atcgtggccg ggatctcgcc cgccacgacg cggcagaaca
      361 gacagtcagc catcgctccc ccgtagtcgt ccggcggccg ccgccgccgc cgcggcgatc
      421 gccgcggtct cgaatcgcag cgtgtgcggg gccagccgga ccgccgcgta gcccgcgtcc
      481 atcagccctt cccgctcggc ccccgtgagc ccgccctccg gtccgatcac caccgtgagc
      541 gggcggtcct ccacgacctg cggcgccggc cggccttccg catcggccag ccagcgggcc
      601 tcgccggccg cgggctggag cagcacggac agcggcacgg gctcctccac ccgggccgcc
      661 caggcggcgc cgctctgctt caccgcctcc agcgcttgac gccgcaggcg gtcgagatgc
      721 tgcgatcgaa ccctcgtcgc cacgcccgcg gtccgctcgc actccagcgg gatcaccgcg
      781 gtgacgccca gctcggtcgc cttctccacc acccaggcga accggtcccg gtccccggcg
      841 cccacgacca gcgtcgtcgg agccggcggc gcgacccgcc gcgtctcggt cacctcgacg
      901 ctccacgccc tccccgccct gcccaacgtc ccgcgaccga ccagcccttg cccgtcccgc
      961 agctccaccg tctcacccgg ctccgcccgg cggacctgga ggtgatgggc ctcgccctcg
     1021 agcagagtgc cgtcgcgccc gaccaggacg cggatcatct ccgtcgggcg gcgacacccc
     1081 accacccggt gtccgtcagc tcctcctcca ccaggaaccc cgctgcctcc agcgggggaa
     1141 tgaagagcgg cgcctccgcc acctccatgc ccgagcagat ggcgatgcct ccgggccgca
     1201 gtgccgccgc gatcgtcggg agaagcgcgg tgttgacgct gcgcaggatg ttggagagga
     1261 ccagatccgc ggggcccagg agtggggcca ggtcgccggc gtcgccttcg agcagctcga
     1321 ccgcgtccgc caccccgttc cgctcgacgt ttctcacggc gacaggatgg gcctcggcgt
     1381 catgctccac cccgatggcg cgggcggcgc cgagcttcac ggcggcaatg gccaggatac
     1441 cgctgccgct cccgagatcg agcacgaggt cgcccgggcg gaggactcgc tccagcagcg
     1501 cgagcgcgac ccgggtggag ccgtgctcgc cgctgccgaa cgcggtctcg ggatcgagca
     1561 ccacggtggg tccggccccg cccggcgccg gcgcccacga cggcgtcacc gtgaggcggc
     1621 cgaagcgccg ggccccgagc ccatcgcgcc accgcgtgga ccagtccacc ggctcgatcc
     1681 gccggcggct ggtcgccgcc ggcgctgccg cctcgcgggc gagctgggcg atcagcgcgt
     1741 ccgcggcggc ttcgtccggc gcgaaggtca cgagggtgcc gtcgtcgcgc tcctccaccg
     1801 cctgcccggt cttcgccacc agccaggcgc ccagccggtc gcgctcctcc ggcgtggtgc
     1861 gcacgtcgat ggcccaccag gtcatgcgcc gagcgcttcc ttgagcttgg accagaatcc
     1921 gggtgagcgc ttggggggct cgccttcgag agtggccagc tgctggaaca gtcgctgctg
     1981 ctcgtcgctg agccgctcgg gc
//
LOCUS       DASUYN010000552         3061 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_174101, whole genome shotgun sequence.
ACCESSION   DASUYN010000552 DASUYN010000000
VERSION     DASUYN010000552.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3061
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174101"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1137
                     /locus_tag="VF061_10795"
     CDS             <1..1137
                     /locus_tag="VF061_10795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX6670039.1"
                     /translation="NALYDGAAALERRLQEVPGLTDVTSDLQIKNPQVQVAIDRDRAA
                     ALGIDVNQIESALYNAYGARQVSTIYTPNDQYWVVMELLPQYQRDLSAMSLLHVTGRE
                     GVSVPLGSLAKVTPGTGPLTVNHSGQLPSVTLSFNLEPGTSLGTAVERVEAAAREVLP
                     STISTSFAGTAQAFQEAQAGLFVLLLMAILVIYLVLGILYESFIHPLTILSGLPFAGF
                     GALLALAIFGLDLSIYAYVGIIMLVGIVKKNAIMMIDFAIEAERGHGKSAREAILEAA
                     SVRFRPIMMTTMAALMGTLPIALGHGAGAEARRPLGIAVVGGLVFSQIITLYITPVIY
                     TYFDALQERLGRRAARTRVTAPGEEPVPAPTPAGAGAVARVREV"
     gene            complement(1058..>3061)
                     /locus_tag="VF061_10800"
     CDS             complement(1058..>3061)
                     /locus_tag="VF061_10800"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEX6670040.1"
                     /translation="IEASRQPIGSSRPAFELAERDLTAEGTAWDSKTGTVFLSSLYKR
                     KIVAIARDGTPRDFIAPGRDGIGPVVGLEVDPSRRGLWAASMVLQEAGIPLADTSLVA
                     HGLLFHYDVDTGRLRRRYVLRPAAGRRHGFNDLTVLPNGDVYLTDSQSGGIYKAPAGG
                     GDLTEVLPPGTYLFPNGITRSDDGRRLFVAHGAGIDRIDLPDGRRTRLAPPDTLNLGG
                     IDGLAFYRGSLIAHQPGWFNRVVRLRLDGAQERVASWSILERHHPRFVQPTTGEVAGD
                     EYYYIANAQLRRFRDGRILPWDSLAPVLVLRTSLRDGPSQAGEAMREAIRSGAAPGAA
                     AAVAVGGRIAWAEAFGMADFARRKPASLETRFGIGSISKTLTLAAALALADAGSLDLD
                     APVERYLPDFPHAGQGVTVRRIGAHQSGIADAFASEHYWTTARFAPLDSAYRLIVAAP
                     MAFRPGSRSEYATGLFTIVGRVLERVGGQEYLDVMRRTVLGPAGMAATLPNDPRRPPP
                     ERTTFYVRAERGGFEPAPAFDPSHKLPGAGFLSTAEDLARFGSALLRPGLLSERGRRE
                     MFTPAPLADGTPTRYALGFQVLEEGGRRLLLQSGGGPGIASWLAVYPDDDVVIAVLSN
                     ATGAPLEETVRRVASGFLRPPAPAPPPPPRRASAQAPAPRPGP"
BASE COUNT          452 a         1107 c         1074 g          428 t
ORIGIN      
        1 aacgcgctct acgacggcgc cgccgccctg gaacgccggc tgcaggaagt tcccggactg
       61 accgacgtga ccagcgacct ccagatcaag aatccccaag tccaggttgc catagaccgc
      121 gaccgcgccg ccgcgcttgg catcgatgtg aaccagatcg aaagcgcgct ctacaacgca
      181 tacggcgccc gtcaggtcag taccatctac acccccaacg accagtactg ggtggtgatg
      241 gagctgctgc cgcagtacca gcgggacctg tcagccatga gcctgctcca cgtcaccggt
      301 cgcgagggcg tctcggtgcc cctcggcagc ctggcgaagg tcacccccgg caccgggccg
      361 ctgaccgtga accactccgg ccagctgccc tcggtcacgc tgtcgttcaa cctggagccc
      421 ggcacgtcgt tggggacggc ggtggagcgg gtggaggcgg cggcgcggga ggtcctgccc
      481 tccaccatca gcaccagctt tgcgggtacc gcccaggcct tccaggaggc ccaggccgga
      541 ctcttcgtgc tgctgctgat ggcgatcctg gtgatctacc tggtgctcgg catcctgtac
      601 gagagcttca tccacccgct cacgatcctc tcggggctcc cgttcgccgg gttcggcgcc
      661 ctgctggcgc tggcgatctt cggcctcgac ctcagcatct atgcctacgt cggcatcatc
      721 atgctggtcg gcatcgtgaa gaagaacgcg atcatgatga tcgatttcgc gatcgaggcc
      781 gagcggggcc acgggaagag cgcgagggag gcgatcctcg aggcggcgag cgtgcggttc
      841 cgtccgatca tgatgaccac catggcggcc ctcatgggca ccctgccgat cgcgctcgga
      901 cacggggccg gtgcggaggc ccgccgacct ctcggcatcg cggtcgtggg gggcctggtg
      961 ttctcccaga tcatcacgct gtacatcacc ccggtgatct acacctactt cgacgccctc
     1021 caggagcgac tcggccgccg ggcggcgcgg acgcgggtca cggccccggg cgaggagccg
     1081 gtgcctgcgc cgacgcccgc cggggcgggg gcggtggcgc gggtgcggga ggtctgagga
     1141 aacccgacgc cacccggcgc accgtctcct ccagcggcgc gccggtcgcg ttggacagca
     1201 ccgcgatcac cacatcgtcg tccgggtaga ccgcgagcca actcgcgatg cccggcccgc
     1261 cgcccgactg gagcagcagc cgccggccgc cctcctccag cacctggaag ccgagtgcgt
     1321 agcgggtcgg cgtcccatca gcgaggggtg ccggagtgaa catctcgcgc cgcccgcgct
     1381 ccgagagcag gccgggtcgg agcagcgccg acccgaaccg tgccaggtcc tcggcggtgg
     1441 acaggaaccc cgcccccggc agcttgtggc tcggatcgaa agccggcgcg ggctcgaacc
     1501 cgccccgctc ggccctgacg tagaacgtcg tgcgttcggg cggagggcgg cgcggatcgt
     1561 tcggcagcgt ggccgccatt ccggccggcc cgagcaccgt ccgccgcatc acgtccaggt
     1621 attcctggcc gcccacccgc tccagcaccc gccctacgat ggtgaacaga ccggtcgcat
     1681 actccgacct gctgcccggc cggaaggcca tgggcgccgc gacgatcagc cggtaggcgc
     1741 tgtccagcgg ggcgaagcgg gccgtggtcc agtagtgctc gctcgcgaag gcgtcggcga
     1801 tgccgctctg gtgggcgccg atgcggcgga cggtgacgcc ctgccccgcg tgggggaagt
     1861 cggggagata gcgctcgacc ggcgcgtcga ggtcgaggga cccggcgtcc gccagcgcga
     1921 gtgccgcggc gagcgtcagc gtcttggaga tgctcccgat cccgaagcgc gtctccaggc
     1981 tcgccggctt ccggcgcgcg aagtcggcca tgccgaacgc ttcggcccag gcgatccggc
     2041 cccccaccgc gaccgcggcg gcagcgccgg gcgcggctcc ggaccgtatc gcttcccgca
     2101 tcgcctcccc cgcctgcgag ggaccatcgc gcagactggt ccgcagcacc aggaccggcg
     2161 ccagcgaatc ccagggcagg atcctgccgt cgcggaagcg gcggagctgc gcgttggcga
     2221 tgtagtagta ctcgtccccc gcgacctcgc cggtcgtcgg ctgaacgaag cgcgggtgat
     2281 ggcgctcgag gatggaccac gacgcgaccc gctcctgcgc gccatccagc cggaggcgga
     2341 ccacccggtt gaaccagccc ggctggtgcg cgatcaggga gccccggtag aaggcgagtc
     2401 cgtcgatgcc gccgaggttg agcgtgtcgg gcggggccag ccgggtgcga cgaccgtcgg
     2461 gcaggtcgat ccggtcgata cccgccccgt gcgcgacgaa cagccgccga ccatcgtcgg
     2521 aacgggtgat gccgttgggg aacaagtagg tgccgggcgg gagcacctcc gtcagatccc
     2581 cgccgccggc gggagccttg tagatcccgc ccgactggct gtcggtgagg tacacgtcgc
     2641 cgttggggag gaccgtcagg tcgttgaagc cgtggcgccg gcccgccgcg ggccgcagca
     2701 cgtaccgacg gcgcagtcgg ccggtgtcca cgtcgtagtg gaagagcagc ccgtgcgcca
     2761 cgagcgaggt gtccgccagc gggattcccg cttcctgcag caccatgctc gccgcccaca
     2821 gcccccgcct cgacggatcc acctcgaggc cgaccaccgg accgatgccg tcccggcccg
     2881 gggcgatgaa atcgcgtggg gtaccgtccc gggcgatggc cacgatcttc cgcttgtaca
     2941 ggctgctgag gaacaccgtg ccggtcttgg aatcccacgc ggtcccctcg gcggtcaggt
     3001 cccgctcggc cagctcgaag gccggacggc tgctgccgat cggctgccgg gaggcctcga
     3061 t
//
LOCUS       DASUYN010000553         2670 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_174378, whole genome shotgun sequence.
ACCESSION   DASUYN010000553 DASUYN010000000
VERSION     DASUYN010000553.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2670
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174378"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(227..2323)
                     /locus_tag="VF061_10805"
     CDS             complement(227..2323)
                     /locus_tag="VF061_10805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670041.1"
                     /translation="MILGLTGVGLAGAAALGALLVRQADPRSLDANLIVIAPFDVFDP
                     ELGLWREGLGDILSRSLDAAGPLRTVSPTAALRRWEGRADRASAEALGRRTGAGLVVF
                     GTVVPKGRDSVTLRAGVLDAVSGSAQREVEVSGASARIGELADSLGIRILQALGLGRA
                     IGSVRHVSMGSRSLPALKAFLQGEQFYRRGLWDSALARYDQAIAADSTFALALSRMKW
                     ALYWHPPTVGAYQQADEYARRSTLYNHGLSPRESLLIVADSFSFAADAATDPRAYVGF
                     QFRRLGALEEAVRRYPGDPEAWYVLGENRMHAPFPLGTPPATTFETFSRSIALDSGFA
                     PAYEHMADLAIRLGRPELARQFAAAYLSLSPDAESALSTRLVLLALDPNQSGAVDTAR
                     LVDSAAVSDIWGAVFDNLGFFTDSAETQVRLLRTMGDSNRSAGTHADWVLDSLMWPQY
                     LAVALAYRGHLREAYQTNRRLLLDPAASKWSQAFDPFINLALLGAVPDSVAESVFAPA
                     LESTAPWGSGWTPRHLRGLPWWLARGDTASLTRFAARAAEETRRPNPPPVVLRARLLG
                     ATSTAYAALARGDSAGALEHLEAIPDTLCLVGLPSDCFHLNLTRARLLAARGDDRRAG
                     AVLERWRWATVPGPSPWFVLATLERGRVAERLGEREKAIESYRFVTEAWRRPDPELQP
                     YVSEAREALARLALRE"
BASE COUNT          432 a          900 c          961 g          377 t
ORIGIN      
        1 atcggtctcg tggcgctgca gtacttcgac gcgaaggcgc gggcggagga gcggtggctg
       61 gtggggcggt atccggaata tcagcggtac gcgcgacacg tgcggcggcg ggtgttgtag
      121 catgcgcgga cgacgggtcc aggactccgg agcaggtgct cgggagcctg tatccggtgc
      181 cactgtacat ccaatatcat aggcgagaag ccgccgctcc gggcgctcac tccctcaggg
      241 cgagcctcgc gagcgcctcg cgcgcttcgc tgacgtacgg ctgcagctcc ggatccggcc
      301 ggcgccatgc ctccgtcacg aagcggtagc tctcgatcgc cttctcccgc tcccccagcc
      361 gctcggccac gcgaccgcgc tccagggtcg ccagcacaaa ccacgggctg gggccgggga
      421 cggtggccca gcgccaccgc tccagcacgg caccggcccg gcggtcatca ccccgcgcgg
      481 cgaggagccg tgcgcgcgtg agattcaggt ggaagcaatc ggacggcaag cctaccaggc
      541 acagggtgtc gggtattgct tccaggtgct cgagtgcccc ggcggaatcg ccgcgggcga
      601 gggcggcata ggcggtggac gtggcgccga gcagccgggc ccgaaggacg accggtggag
      661 gattgggccg gcgggtctcc tctgcagccc gggcggcgaa ccgcgtgagc gacgcggtat
      721 cgccacgggc gagccaccag gggaggccgc gaaggtggcg cggggtccac ccagagcccc
      781 acggcgcggt cgactcgagc gcgggcgcga agacggactc ggccacggag tccgggaccg
      841 ccccaagcag ggccagattg atgaatgggt caaaggcttg gctccatttc gaagcggccg
      901 ggtcgagcag caggcggcgg ttggtctggt aggcctcgcg gaggtggccc cggtaggcga
      961 gtgcgacggc cagatactgg ggccacatca gcgaatcgag tacccagtcc gcgtgtgtgc
     1021 ccgcgctccg attggagtcg cccattgtgc ggagcagccg aacctgggtt tccgccgagt
     1081 cggtgaagaa gccgaggttg tcgaagacgg ccccccagat atcgctgacc gcggcgctgt
     1141 cgaccagccg ggccgtgtcc actgcgccgg actgattggg atccagcgcg aggaggacca
     1201 gccgagtgct caaggcactc tcggcgtcag gagacagact caggtaagcg gccgcgaatt
     1261 gcctggcgag ctcagggcgg cccagccgga tggccaggtc tgccatgtgc tcgtaggccg
     1321 gcgcgaatcc cgagtccagc gcgatcgacc ggctgaaggt ctcgaaggtc gtggcgggcg
     1381 gggtaccgag cggaaacggc gcgtgcatgc gattctcgcc cagtacgtac caggcctccg
     1441 ggtctccggg atagcggcgg acggcctcct cgagcgcgcc cagcctgcga aattggaagc
     1501 cgacgtaagc tctcgggtcg gtcgccgcgt cggcggcgaa ggaaaacgag tcggccacga
     1561 tcagcaggct ttcccgaggc gacaggccat ggttgtacag cgtcgagcgc ctggcgtatt
     1621 cgtcggcttg ctggtacgct cccaccgtag gcgggtgcca gtacaaagcc catttcatcc
     1681 ggctcagcgc gagggcgaag gtgctgtcgg cggcaatcgc ctggtcgtat cgagccaggg
     1741 cggagtccca taacccccgc cggtagaact gctcaccttg caggaaggcc ttcagcgccg
     1801 gcagcgatct cgaccccatg gatacgtgtc gcaccgaccc gatcgcccga cccagcccca
     1861 gggcctgaag gatccggatg cccagcgagt ccgccagctc gccgatcctc gcggacgcgc
     1921 ccgagacctc gacctcacgc tgggctgacc cactcacggc gtccaacacg ccggcgcgga
     1981 gtgtgaccga gtcccgcccc ttcgggacca cggtgccgaa cacaaccagc cccgcgccgg
     2041 tgcggcgacc gagagcctcg gcggaggctc ggtccgcgcg accctcccac cgccgcaggg
     2101 cggcggtggg agacacggtg cggagcggac cggcggcgtc gaggctgcgg gagaggatgt
     2161 cgcccagccc ctcgcgccac aggccgagct ccggatcgaa tacgtcgaac ggcgcgatca
     2221 ctatcaaatt cgcgtcgagg gatcgaggat cggcctgacg gactaggagc gctcccagtg
     2281 cggctgcgcc ggccagtccg actccggtga gtcccagaat cattaggcga cgctgcctac
     2341 gcttccggtc aacgctcggg gatgcggatg gcggctcgtc gagcggcggt gcgaggtcag
     2401 cggtcgaggc gaactgatcc gtggttaccc tagcaggtgc cgaagtgcct gcgtgcgggg
     2461 gccctccatt cgagcccgtg tccggtgacc aggcggctac cttgtgatcg tcaccgttcg
     2521 ccgggtcggt gcgcagccgg tcggccagtg caacgacgtc tgggtccggc cccgcctcga
     2581 actcctgctg cagcagcaac gcgtgcagtc gcgcctgctg gagcgctccc gcacggtcac
     2641 cggccccgtc cagcgctctc atcagccgca
//
LOCUS       DASUYN010000554         4084 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1718841, whole genome shotgun sequence.
ACCESSION   DASUYN010000554 DASUYN010000000
VERSION     DASUYN010000554.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4084)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4084)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4084
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1718841"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1126
                     /locus_tag="VF061_10810"
     CDS             <1..1126
                     /locus_tag="VF061_10810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670042.1"
                     /translation="ARPSAHYISAMPPARPLAAAVTLILLAACGDPTPPAPVVELRPG
                     PDTVSTGYAEILDGEWLGGDRWAVVAPLDVTVGIVDFARRAVAPLGGERTREIRNPSI
                     VFLTSDTLHVGDWGLRRVSLWTRDGKLVRAVPASDRLRGALPQARDDAGRWYAELRPT
                     AGRDGSGNRDSAAVVAASPGFEGLDTVGRLAPLDLAEVRGDAGRRFEPRALSGEDRWG
                     ALPDGSVWVARVFENRVDWRSPQGEWEEGDPLPDRVLEVTDYDRELFYRKFPPELRAT
                     AERLPFAAVKPPFEAGMTSPAGTVWLEKSRAPADSSRRYHEVDRDGRLKREIRVPGPG
                     RIVAIGAERVLVAERVTDGTRFIAFDLPPANPRSPSGDAP"
     gene            1123..2292
                     /locus_tag="VF061_10815"
     CDS             1123..2292
                     /locus_tag="VF061_10815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670043.1"
                     /translation="MKSYPWLCALALLGLAGCSSAGSAERSEDAGNAASGEAGLPDSA
                     GLALEAKLPASFGQLSNVIELERDRVAFADTRDKLFLAGTFASGELDTLGRRVEAIKP
                     DADPGEYKFPGWVARLGGDTVALVDFAALRTTLWNRKGEPLRVLALAPVAGTAPVLVY
                     DTIGHGYKIDYQTMLSTEPGMSRRADSVPVLRIALVGGKVDTVANLAAPQFGRAKFGE
                     QVQEAATVFAPNDFFGVLANGSAWVARGKENRVDWRSPEGRWSEGRSHEYQAQPVTQA
                     DRDRVLAQVRQQGKQYGMPQELAIDYPFAATKPPFDFALGRPNGEVWLQRPRGTETAR
                     VVYDVFDRQGAWRRQVTFPLGAALAGFGDSGAIYASLRNEDGTRSVGRYRLTGSP"
     gene            complement(2299..3024)
                     /locus_tag="VF061_10820"
     CDS             complement(2299..3024)
                     /locus_tag="VF061_10820"
                     /inference="COORDINATES: protein motif:HMM:NF017373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670044.1"
                     /translation="MNELYERLLIGAEQIGSVVPALVGAAVIMLTGYFLARQVQRWAD
                     ETLKKVDFNRMAAAGGLDEVVGRTGSRLDPVRALAKLIFWLVMLVVILLASTALGLES
                     INQMFGMMLAFIPTLIAAIVIIILGMIVGEFVRGLILASAGGVAGVPTVAKIAKGAVI
                     VIALFMALQQVGVAEEIVTAAFTLILGAVALAVGLAFGLGNRELAGEITRRWYEEGQR
                     RDRRRTDRQGPNTPPGGEPPILD"
     gene            complement(3021..>4084)
                     /locus_tag="VF061_10825"
     CDS             complement(3021..>4084)
                     /locus_tag="VF061_10825"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEX6670045.1"
                     /translation="IDRHPPPPMRALTLTGIGGLEHLAVREVPAPRLRGDDDVLVRVR
                     CAALNRLDLWMTGGLPGAEPVFPHIVGSDGAGEVDAVGPAASRWRPGDRVLINPGISC
                     GHCPSCEEGEESLCASFGILGEHLPGTAAELVVVPAANLGRVPDGMSWSEAAAFPLAT
                     LTAWRMLTGRARLQAGETVLIWGVGGGVGMAALQVAVLLGARAIVTSSSDAKLETAAR
                     LGAALGLNHRTADVVAEVRRETGGRGAHVVVDCVGEATWTGSQRGLRRGGRLVVCGAT
                     TGPSVTLDLRRLFWHQWSILGSTMGSRREFAEIVRLAHEGRLWPVVDSVLPLAEGARA
                     YARMQRGEQTGKLVIEVSP"
BASE COUNT          591 a         1497 c         1446 g          550 t
ORIGIN      
        1 ggcccgacca agtgcccatt acatttccgc catgccgccc gcccggcccc tggccgccgc
       61 cgtcaccctc atcctgctcg ccgcctgtgg agatccgacg cccccggctc ccgtcgtgga
      121 gctgaggccg ggccccgata ccgtctcgac cggctacgcc gagatcctgg acggcgagtg
      181 gctggggggc gaccgctggg cggtggtcgc gccgctggac gtcacggtcg gcatcgtgga
      241 cttcgcccgt cgcgccgtgg cgcccctggg cggggagcgc accagggaga tccgcaaccc
      301 ctccatcgtc ttcctcacct ccgacacgct gcacgtggga gactggggac ttcgccgggt
      361 gagcctctgg acgcgtgacg gcaagctggt gcgcgccgtt ccggcatcgg accgcctgcg
      421 gggcgcgctc ccgcaggcgc gggatgatgc cggccgctgg tacgccgagc tcaggcccac
      481 ggcgggacga gacggcagcg gcaaccggga ctccgcggcc gtggtggccg cgagtccggg
      541 attcgagggt ctcgacaccg tgggccggct ggcgccgctg gacctcgcgg aggtcagggg
      601 cgatgcgggc cgccggttcg agccgcgcgc gctgagcggg gaggatcgct ggggcgctct
      661 ccccgacggc tccgtctggg tggcgcgggt cttcgagaat cgggtggact ggcgctcgcc
      721 gcagggcgag tgggaggaag gcgacccgct gccggatcgg gtactcgagg tgaccgacta
      781 cgaccgggag ctgttctacc gcaagtttcc ccccgagctg cgggccacgg ccgagcggtt
      841 gcctttcgcg gcggtgaagc ccccgttcga ggccgggatg acctcgccgg ccgggacggt
      901 gtggctggag aagagtcgtg ccccggcgga ctcgtcacgc cgctatcatg aagtcgaccg
      961 cgacggccgc ctgaagcggg agattcgggt gccggggccc ggacgcatcg tcgccatcgg
     1021 cgccgagagg gtcctggtgg cggaacgggt gaccgacggc acccgcttca tcgcgttcga
     1081 ccttccgccc gcgaaccctc gctccccatc cggagacgct ccatgaagtc ctacccctgg
     1141 ctctgcgcgc tcgccctcct cggtctcgcc ggctgttcca gcgcggggag cgccgagcgg
     1201 tccgaggacg ccgggaatgc cgcctccggc gaggccggcc ttcccgacag cgccggtctc
     1261 gccctggagg ccaaactgcc cgccagcttc ggccagctca gcaacgtgat cgagctggag
     1321 cgcgaccggg tggcgttcgc cgacacgcgc gacaagctct tcctcgccgg aaccttcgcc
     1381 agcggcgagc tggacacgct cggacgccgg gtcgaggcga tcaagccgga tgccgacccg
     1441 ggcgagtaca agttcccggg ctgggtggcg cggctcgggg gtgacaccgt ggcactagtg
     1501 gacttcgccg cactgcgcac caccctctgg aaccgcaagg gggagccgct gcgggtactg
     1561 gctctcgcgc cggtggcggg cacggcaccg gtcctggtgt acgacaccat cgggcacggc
     1621 tacaagatcg actaccagac catgctgtcc accgagcccg ggatgtcgcg ccgggcggac
     1681 agcgtcccgg tgctccggat cgcgctcgtc ggcgggaagg tggacaccgt ggcgaacctc
     1741 gcggccccgc agttcggccg tgccaagttc ggggagcagg tgcaggaggc cgccacggtc
     1801 ttcgcgccca acgacttctt cggcgtgctg gcgaacggca gcgcctgggt ggcgcgaggg
     1861 aaggagaacc gggtggactg gcgctcgccc gagggccggt ggagcgaagg ccggagccat
     1921 gaataccagg cccagccggt gacccaggcc gaccgcgacc gggtgctggc ccaggtgcgg
     1981 cagcagggaa agcagtacgg catgccgcag gagctcgcga tcgattatcc cttcgcggcc
     2041 accaagcccc cgttcgactt cgcgctgggc cggcccaatg gtgaagtctg gctccagcga
     2101 ccgcgcggca ccgagaccgc tcgagtcgtg tacgacgtct tcgaccggca gggtgcctgg
     2161 cggcggcagg tcacctttcc gctgggcgcc gcgctggcgg gtttcgggga cagcggcgcg
     2221 atctacgcgt cgctccggaa cgaggacggg acccggtcgg tggggcgcta ccggctcacc
     2281 gggagtccct gagggtcctc aatccaggat cggcggctcg ccgcccgggg gcgtgttggg
     2341 cccctggcgg tccgtgcgcc gccggtcgcg gcgctgtccc tcctcgtacc accgccgggt
     2401 gatttccccc gcgagctccc ggtttcccaa gccgaacgcg agtccgaccg ccagcgcgac
     2461 agcgccgagg atgagcgtga acgcggcggt gacgatctcc tccgcgacgc cgacctgctg
     2521 cagcgccatg aacagggcga tgacgatgac cgcgcccttg gcgatcttcg ccacggtcgg
     2581 gacgcccgcc acgccgccag cggaagccag gatcagaccg cgcacgaatt cgcccacgat
     2641 catcccgagg atgatgatca cgatggcggc gatgagggtc ggaatgaagg cgagcatcat
     2701 cccgaacatc tgattgatgc tctccagccc cagcgccgtg ctcgcgagca ggatcaccac
     2761 cagcatcacc agccagaaga tcagcttggc gagcgcgcgc accggatcca gccgcgagcc
     2821 ggtgcgtccc accacctcgt ccaggccgcc ggccgccgcc atccggttga aatccacctt
     2881 cttgagcgtt tcgtccgccc accgctggac ctgccgggcc aggaagtagc cggtcagcat
     2941 gatcacggct gcgcccacca gcgcgggcac cacgctgccg atctgctcgg cgccgatcag
     3001 gagacgctca tagagttcgt tcacggcgac acctcgatca cgagttttcc ggtctgctcg
     3061 ccccgctgca tccgggcgta ggcccgggcg ccttccgcca gcgggagcac gctgtccacc
     3121 accggccaga ggcggccctc gtgggccagc cgcacgatct cggcgaactc acggcggctt
     3181 cccatcgtcg agcccaggat gctccactga tgccagaaca ggcggcggag atcgagcgtc
     3241 accgaagggc cggtcgtggc tccgcagacc accaggcggc cgccgcgacg aagcccgcgc
     3301 tgtgatcccg tccaggtagc ctcgcccacg caatccacga ccacgtgtgc accgcggccc
     3361 ccggtctccc gccggacctc cgccaccaca tccgcggttc gatgattcag gccgagggcg
     3421 gcgccgagcc gggccgcggt ctcgagcttg gcatcggagc tgctggtgac gatggcgcgc
     3481 gcgccgagga ggacggcgac ctggagtgcc gccatcccca cccccccgcc gacaccccag
     3541 atcaggaccg tctcgccggc ctggagcctg gcgcgtccgg tcagcatccg ccacgccgtg
     3601 agggtcgcca gcgggaacgc cgcggcctcc gaccaggaca tcccgtcggg cacccggccc
     3661 aggttcgcgg ccgggaccac caccagctcg gcggcggtgc ccggcaggtg ctcccccagg
     3721 atgccgaagg aggcgcagag cgattcctcg ccctcctcgc aggaggggca gtggccgcag
     3781 gagatgccgg ggttgatcag gacccggtcg cccgggcgcc agcggctcgc cgccggcccg
     3841 accgcgtcca cctcgcccgc gccatccgac ccgacgatgt gcgggaacac cggctcggcc
     3901 ccgggcaggc cgccggtcat ccagaggtcc agacggttga gcgcggcgca ccggacccgg
     3961 accagcacgt cgtcatcgcc ccggagcctc ggggccggca cctcccgcac cgccagatgc
     4021 tccagtccgc cgatcccggt gagcgtgagg gccctcatcg gcgggggcgg atggcgatcg
     4081 atct
//
LOCUS       DASUYN010000555         4178 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_616130, whole genome shotgun sequence.
ACCESSION   DASUYN010000555 DASUYN010000000
VERSION     DASUYN010000555.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4178)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4178)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4178
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_616130"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1003)
                     /gene="der"
                     /locus_tag="VF061_10830"
     CDS             complement(<1..1003)
                     /gene="der"
                     /locus_tag="VF061_10830"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HEX6670046.1"
                     /translation="MSRPTVAIVGRPNVGKSTLFNRILGGRRAIVSERPGTTRDRHFG
                     DAEWQGRRFWVVDTGGLVPESDDSMDRAIRQQVEFALAESDVVVFLVDGKEGVQPVDQ
                     AIAERLRRARRPVVLAVNKLDDLERSTAHLEFYELGVGEPVGVSAAVGKGSGDLLDAV
                     VGNLPPYDPAESEDTIHVAVVGRPNVGKSSLVNRLLGEERHVVAAEAGTTRDAIDSLL
                     RYNGKNLNFIDTAGLRRRAKVQDDLEFYSTLRTERAVERAEVCVLVVDATVGLHNQDL
                     RIATEAWERGCGLVVAVNKWDLVEEKDANTARRGQDELIAKAPFLRYVPFVYVSALTG
                     "
     gene            complement(1000..2277)
                     /locus_tag="VF061_10835"
     CDS             complement(1000..2277)
                     /locus_tag="VF061_10835"
                     /inference="COORDINATES: protein motif:HMM:NF016354.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF512 domain-containing protein"
                     /protein_id="HEX6670047.1"
                     /translation="MIRVTAVQPDSIAQELGLQVGSELVSVDGRELEDFLDWEFLTAE
                     ERFLLHVRQPDGEEIEFDIERPLNEPLGVSLEPPRIRRCANRCDFCFVDGLPDGLRDV
                     LYIRDDDYRLSFRYGNFATLTNLKPRDEERIVEYRLSPLYVSVHATDPSVRRFLLRNP
                     TAPAILPQLRRFAEHGIEFHTQIVMSPGVNDGAILRQTLEELYRFGSAILGCSVVPVG
                     LTEYSKHHLVREPTAEECRAAIALVEERSTIALAERGTHWAFGADELYLRAGVDLPPA
                     EIYDAFDQVEHGVGAVRWLQRRIDARGASISGWEGRRVGVVTGTAMGRLMPMVLEPLA
                     RATGARFDLLPLVNTLFGASVTTAGLLPGAAVQAALHERTDLDLVLLPGEAVNDDGLF
                     IDGMSADTLAATLPVEIRFSKDFADALELGVAA"
     gene            complement(2355..>4178)
                     /gene="ppk1"
                     /locus_tag="VF061_10840"
     CDS             complement(2355..>4178)
                     /gene="ppk1"
                     /locus_tag="VF061_10840"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR03705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009358 - polyphosphate kinase complex
                     [Evidence IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006799 - polyphosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HEX6670048.1"
                     /translation="GALKEEDDEESAARLEAIGIRVAALLARQHRVLEACLAQLDAAG
                     IRIRRWDGLTPTARALLQAQFQREIFPLVTPRAITVSPGFPVPVMPHLTPLIAVVLSD
                     GQTGPAHFAYLRLPDRIPRFLPVPDGNDLILLEDVVRANLNLVYPERRIEGAWLFRLT
                     RAAELDLSDEDAGNLLQAIEESVGRRAMNPIVRVEVERAMPQPLRERLLWELRFERGA
                     DAGSVRERDLVEIDGMLDLRALRELMGAPVPGGRYPPFEGHSPWPADRDIWSMLRERD
                     SLVYHPYERFADSTARFFSDAADDPAVVAIRLTLYRIGERSPIVDALTRALERKKEVA
                     IFVELKARFDETRNVGWVRRLEEAGATVVYGVVGLKNHAKVGLVLRREDDGLRHYVHI
                     GTGNYNAATAKAYTDLSLFSADPELGADLHDLFNMLTGSSRGPRGSFRRIAVAPEGLL
                     PWLLESIERERENAAAGRPARIRAKLNGIADTEVVQALYRASRAGVSIELVVRGICVL
                     RPGVPGHSERIRVVSRLGRFLEHARIYHFANGGEERYFIGSADWRLRNLRRRVEVVTP
                     VTDAAACATLDGILDRELTDPDAWVLHADGSYARAGDAGEA"
BASE COUNT          647 a         1519 c         1417 g          595 t
ORIGIN      
        1 gcccggtgag cgcggagacg tagacgaacg gcacgtagcg gaggaacggc gccttggcga
       61 tcagctcgtc ctggccccgg cgcgcggtgt tcgcgtcctt ctcctccacc aggtcccact
      121 tgttgaccgc cacgaccagc ccgcacccgc gctcccacgc ttccgtcgcg atccggaggt
      181 cctggttgtg gagcccgacc gtggcatcaa ccaccaggac gcacacctcg gcccgctcga
      241 cggcgcgctc ggtgcgcagg gtggaataga actctagatc atcctgaact ttagcccggc
      301 gacgtaaacc tgcggtatca atgaagttga ggttcttacc gttatagcgc aagagggagt
      361 cgatggcatc gcgggtggtg cccgcctcgg ccgccaccac gtgccgctcc tcgccgagca
      421 gccggttcac cagcgaggac ttgcccacat tgggccgccc gaccactgcg acgtggatcg
      481 tgtcttccga ctcggcgggg tcgtagggcg ggaggttccc caccaccgcg tcgagcaggt
      541 ccccactccc cttgccgacc gccgcgctca cgccgacggg ctcgccgacg cccagctcgt
      601 agaactcgag gtgcgcggtg ctccgctcca ggtcgtccag cttgttcacc gcgagcacca
      661 ccgggcggcg ggcgcggcgc agccgctcgg cgatcgcctg gtccaccggc tgcacgccct
      721 ccttgccatc caccaggaac accaccacgt cggattccgc cagcgcgaac tcgacctgct
      781 ggcggatggc gcggtccatg gagtcgtcgg attccggcac cagcccgccg gtgtccacga
      841 cccagaagcg ccggccctgc cactccgcgt cgccgaagtg ccggtcgcgc gtggtgccgg
      901 gacgctcgga cacgatggcg cggcgcccgc ccaggatgcg attgaacagg gtggactttc
      961 cgacgttggg ccggcccacg atcgccaccg tcggcctgct catgccgcca cacccagctc
     1021 gagtgcgtcg gcgaagtcct tggagaaccg gatctccacc ggcagcgtgg ccgcgagcgt
     1081 gtcggcgctc atcccatcga tgaagagccc gtcgtcgttg accgcctcgc ccggcagcag
     1141 cacgagatcg agatcggtgc gctcgtggag cgccgcctgc accgcggcgc ccggcaggag
     1201 gccagccgtg gtgaccgagg ccccgaagag cgtattcacc agcggcagca ggtcgaaccg
     1261 cgcgccggtg gcgcgggcca gcggctccag caccatcggc atgagacgcc ccatcgcggt
     1321 gccggtcacg acgccgacgc ggcgaccttc ccagccgctg atgctcgccc cgcgcgcgtc
     1381 gatgcggcgc tggagccacc gcaccgcgcc gacgccgtgc tccacctggt cgaaggcgtc
     1441 gtagatctcc gccggcggga gatccacccc ggcacgcaga tacagctcgt ccgcgccgaa
     1501 ggcccaatgg gttccccgct ccgccagggc gatcgtcgag cgctcctcga ccagcgcgat
     1561 cgcggcgcga cattcctccg cggtaggctc gcgcaccagg tggtgcttgc tgtactccgt
     1621 gaggccgacc ggcaccacgg agcagccgag gatggccgac ccgaagcggt acagctcctc
     1681 cagcgtctgc cgcaggatcg cgccgtcgtt cacccccggc gacatcacga tctgggtgtg
     1741 aaactcgatc ccgtgctcgg cgaatcggcg cagctgcgga aggatcgccg gcgccgtcgg
     1801 attgcgcagc aggaaccggc gcacggaggg atcggtggcg tggaccgaga cgtagagcgg
     1861 ggagaggcgg tactcgacga tccgctcctc gtcccgcggc ttcaggttgg tcagcgtggc
     1921 gaagttgccg tagcgaaagg agagccggta gtcgtcatcg cggatgtaga gcacgtcccg
     1981 caacccgtcc gggagtccgt ccacgaagca gaaatcgcag cggttggcgc accggcgaat
     2041 gcgggggggc tccagcgaca cgcccagcgg ctcgttcagc gggcgctcga tgtcaaactc
     2101 gatctcctcc ccgtcgggct ggcgcacatg gagaagaaag cgctcctcgg cggtgaggaa
     2161 ctcccagtcg aggaagtcct ccagctcccg gccgtccacc gagacgagct cgctgccgac
     2221 ctggagcccc aactcctggg cgatcgaatc cggctgcacc gcagtcaccc tgatcatggg
     2281 cggaaaagat cgcagggcgg gagcctaaat tcaagacttg cggccacttc actaccaacg
     2341 gcgaaagtag cttctcaagc ctccccggcg tcgccggccc gggcgtagct cccgtccgcg
     2401 tgcagcaccc atgcgtcggg atcggtgagc tcgcggtcga gaatcccgtc gagggtggcg
     2461 cacgccgcgg cgtcggtcac cggcgtcacc acctcgaccc gccggcggag gttgcgcagc
     2521 cgccaatcgg cggagccgat gaagtaccgc tcctcgccgc cgttggcgaa atggtagatg
     2581 cgcgcgtgct cgaggaatcg ccccaggcgg ctcaccaccc ggatccgctc ggagtggccg
     2641 ggcacgccgg ggcgcagcac acagatcccc cgcaccacca gctcgatgct cacgcccgcg
     2701 cgggacgcgc ggtagagtgc ctgcaccacc tcggtgtcgg cgatgccgtt gagcttggcc
     2761 ctgatccgtg ccggccgccc ggcggcggcg ttctcccgct cccgctcgat cgactccagc
     2821 agccagggga gcaggccctc cggcgccacg gcgatgcggc ggaaactgcc tcgcgggccg
     2881 cgactggagc cggtgagcat gttgaacagg tcgtgcaggt cggcgcccag ctcgggatcg
     2941 gcggaaaaga gcgagagatc ggtgtaggcc ttggccgtgg ccgcgttgta attgcccgtg
     3001 ccgatgtgga cgtagtgccg gagcccgtcg tcctcccgcc gcaggaccag gcccaccttc
     3061 gcgtggttct tgagacccac cacgccatac accacggtcg cgcccgcttc ctcgagccgg
     3121 cgcacccagc ccacgttccg ggtctcgtcg aatcgggcct tcagctccac gaagatggcc
     3181 acttccttct tccgctccag cgcgcgcgtc agcgcgtcca cgatcggcga gcgctcgccg
     3241 atccggtaca gggtgaggcg gatggcgacg accgccggat cgtccgccgc gtcggagaag
     3301 aagcgcgccg tgctgtcggc gaaccgctcg taggggtggt agaccagcga gtcgcgctcg
     3361 cgcagcatgg accagatgtc acggtccgcg ggccaggggc tgtggccttc gaacggcggg
     3421 tagcggccgc ccggcacggg cgcccccatc agctcccgca gcgcgcgcag gtccagcatg
     3481 ccgtcgatct cgaccaggtc gcgctcccgc accgagcccg cgtccgcgcc acgctcgaac
     3541 cgcagctccc agagaagccg ctcccggagc ggctgcggca tcgcccgctc cacctccacc
     3601 cgcacgatcg gattcatcgc gcgccggccc accgactcct cgatggcctg gagcaggttg
     3661 ccggcatcct cgtccgagag atccagctcg gccgcgcggg tcaggcggaa gagccaggcg
     3721 ccttcgatcc ggcgttcggg atagaccagg ttgaggttgg cgcggaccac gtcctccagc
     3781 aggatgaggt cgttgccgtc cggcaccggc aggaagcggg ggatccggtc cggcagccgg
     3841 aggtaggcga agtgcgcggg cccggtctga ccgtcactca gcacgaccgc gatgagcggg
     3901 gtcaggtgcg gcatgaccgg caccggaaac ccggggctca ccgtgatggc gcgcggggtc
     3961 accaggggga agatctcccg ctggaactgg gcctggagca gcgctctcgc cgtgggggtc
     4021 agcccgtccc accggcggat gcggatcccg gcggcgtcga gctgcgcgag acacgcttcc
     4081 aggacccggt gctgtcgcgc gagcagcgcc gcgacccgga tgccgatggc ctcgagtcgc
     4141 gccgcgctct cctcgtcgtc ctcctccttc agcgcgcc
//
LOCUS       DASUYN010000556         2083 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1500240, whole genome shotgun sequence.
ACCESSION   DASUYN010000556 DASUYN010000000
VERSION     DASUYN010000556.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2083)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2083)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2083
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1500240"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2083
                     /locus_tag="VF061_10845"
     CDS             <1..>2083
                     /locus_tag="VF061_10845"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX6670049.1"
                     /translation="DAVPAAQRRAVPARVWKAAVVGLVLIDLIALGALWWTRRHPRHR
                     LVQPELVAVFPFTVEGGPEVQYLGTGMVDLLTSNLEGAGETRAVDPQVLLDRMANGGT
                     APRTPAEAREAAAQFGAGRSVLGNVVESGGHLHVRAAVYGHGGGDRPLALAAVEGESS
                     ELFDLVDRLTTELLAKGQPDVRDRLARVAATTTTSLDALKRYLTGERELRGGRYVPAL
                     EAYRAAVELDPAFALAYYRLSIASEWAGRDSLARLAADSAAHFAGRLADHDRVLVEAL
                     AARRSGAWADAERLYRQVVDDHPDDVEALLQLGQLLFQTNPLRGRSAAESRPAFERVV
                     ALDPENGEALVHLARIASIEGKRQAMDTLMRRLTALGTATEVLETRAFRAFALGDREA
                     WKRVTRELMDNPPDVPAVTALQVATYLDDLDGAERFARHLTDARYSDDVRGMAHRLLA
                     RVAVARGRWTAARVQLDTAGRFDATAELELRSLLAVLPFLQVRRAELLDIRRRVAEWP
                     ARVEAPGEPSHSAGHTGLHPYVRLYRLGLLDARLGDTAGALALAASLERAGGSASGLK
                     AGALRTFAWSIRARVAGQAGRSAEALEHLERSSWGVVESIFEAEALDRYYRAELLFAL
                     GRHAEALDWYRTIAERATYELVYVAPARWRQGWLYQRTGEAARAADAYRTVARLWRDA
                     DPPLRDTAAEAS"
BASE COUNT          261 a          771 c          772 g          279 t
ORIGIN      
        1 aggacgcggt gcccgccgcc cagcgccgcg ccgtgccggc acgcgtgtgg aaggccgccg
       61 tggtcgggct cgtattgatc gacctcatcg ctctgggcgc gctctggtgg acgaggagac
      121 acccgcggca ccggctggtg cagcccgagc tggtggccgt cttcccgttc acggtcgagg
      181 gcggccccga ggtgcagtac ctgggcaccg gcatggtgga cctgctcacc agcaatctcg
      241 agggcgccgg agagacccgt gccgtggacc cgcaggtgct cctcgaccgc atggccaacg
      301 gtggcacagc gccgcggacg cccgcggagg ctcgcgaggc ggccgcccag ttcggcgccg
      361 gccgctccgt gctcggcaac gtggtggaga gcggcgggca cctccacgtg cgcgccgccg
      421 tctacggcca cgggggcggg gaccggccgc tggcgctcgc cgcggtcgaa ggcgagagct
      481 ccgagctgtt cgacctcgtg gaccggctga ccacggagct cctggcgaaa ggccaaccgg
      541 atgtccgcga ccggctcgcg cgggtcgccg ccaccactac gacctccctc gacgcgctga
      601 agcgctatct caccggcgag cgcgagctgc gggggggccg ctacgtcccc gccctcgagg
      661 cgtaccgtgc cgcggtcgag ctggaccccg ccttcgctct cgcctactac cggttgagca
      721 tcgcctccga gtgggcgggc cgggacagcc tcgcccggct cgccgccgac tcggccgcgc
      781 acttcgccgg ccgcctcgcc gatcatgacc gcgtgctggt cgaggcgctg gcggcccgtc
      841 gctcgggcgc gtgggccgac gccgagcgac tctaccggca ggtggtggac gaccatcccg
      901 acgacgtcga ggcgctcctg cagctgggcc agctcctctt ccaaaccaac ccgctgcggg
      961 gccgctcggc cgccgagtcg cgcccggcct tcgagcgagt cgtcgcgctg gaccccgaga
     1021 acggggaggc gctggtgcac ctggcgcgca tcgcatcgat cgagggcaaa cgccaggcga
     1081 tggataccct gatgcggcgg ctgacggctc tcgggacggc gaccgaagtc ctcgagaccc
     1141 gcgccttccg cgccttcgcg ctgggcgaca gggaggcctg gaagcgggtg acccgcgagc
     1201 tcatggacaa cccgcccgac gtgcccgccg tgaccgcgct ccaggtggcg acctatctgg
     1261 acgacctcga cggggccgag cgcttcgcca ggcacctcac cgacgcgcgg tattcggacg
     1321 acgtgcgggg catggcccac cggctgctgg cccgggtggc cgtggccaga gggcggtgga
     1381 ccgcggccag ggtccagctc gacacggcag gacggttcga tgccaccgcg gagctcgagc
     1441 tgcgctcgct gctcgcggtc ctgccgttcc tccaggtgcg gcgcgccgag ctgctcgaca
     1501 ttcgccggcg ggtggccgaa tggcccgccc gggtcgaagc cccgggcgag ccttcgcact
     1561 ccgccggcca caccggcctg cacccgtacg tgcgtctcta tcgcctggga ctgctggacg
     1621 cgaggctggg cgataccgcc ggcgcgctgg ccctcgccgc ctcactcgag cgggccggtg
     1681 gctcggcgag cggattgaaa gcgggcgccc tccgcacttt cgcgtggagc atccgggccc
     1741 gggtcgccgg gcaggccggc cgatccgccg aggcgctcga gcatctcgag cggtcgagct
     1801 ggggagtggt cgagtccatc ttcgaggccg aggcgctcga ccgctattac cgcgcggagc
     1861 tgctgttcgc gctcggtcgc cacgcggagg cgctcgactg gtaccggacc atcgccgagc
     1921 gggcgaccta tgagctggtg tacgtcgctc ccgcccgttg gcgccaggga tggctgtacc
     1981 agcggaccgg cgaggcggcg cgggcggccg acgcctaccg taccgtcgcc cggctgtggc
     2041 gcgacgcgga cccgccgctg cgcgatacag ctgcggaggc gtc
//
LOCUS       DASUYN010000557         7017 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_835305, whole genome shotgun sequence.
ACCESSION   DASUYN010000557 DASUYN010000000
VERSION     DASUYN010000557.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7017)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7017)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7017
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_835305"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..667)
                     /locus_tag="VF061_10850"
     CDS             complement(<1..667)
                     /locus_tag="VF061_10850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lyase family protein"
                     /protein_id="HEX6670050.1"
                     /translation="MTDTRTERDPLGEKAVPASALYGIQTLRAAENFPISGLRPLPAF
                     VDAVVWIKRSAALTHRETGRLEPRLADAIVRAADEVLTGQHRDQFIVDVYQAGAGTSH
                     NMNVNEVLANRANEILGSARGSYAPVHPNDHVNMAQSTNDVIPTAMRLATLATLPATL
                     LALEQLAHSLIAKGVAFDGIIKSGRTHLQDATPIRLGQEFAAYGHTVQRHREKLAQAA
                     DWLR"
     gene            745..1068
                     /locus_tag="VF061_10855"
     CDS             745..1068
                     /locus_tag="VF061_10855"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX6670051.1"
                     /translation="MSDYFRSVDRSAAFDQHKASKTDLWTGERLFVGLNCFEAGQTQK
                     VHAHAGADKFYYVCSGRARLTVGEETREVAAGEIVVAPAGVPHGVAEALERTVLLVGI
                     APPPR"
     gene            complement(1039..1905)
                     /locus_tag="VF061_10860"
     CDS             complement(1039..1905)
                     /locus_tag="VF061_10860"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase
                     domain-containing protein"
                     /protein_id="HEX6670052.1"
                     /translation="MSLLEATLLCIALVLIDLLVRAWRIQWIVQGLGHRIGFWDTFVL
                     NAYGDAACALTPLRLGGEPARLAGMLRSRVPATAAFVAISLEVLAAWPVILVAAGWLI
                     WRYAPAWWSTAGPQLATAAQGAWPWVLLVTLLSVAAWWYARRIASPAVRHVRRPVRRA
                     LVYWRRMPLWPLVASLPLTFLNLATRVAILPVLALTLPSPPEIGPLLVGSFGLLYSQL
                     VLPTPSGAGAVELGFLGGAAGDLGGRAGWLLLAWRFYTNGVGVVLGVGLAAHTYGWPA
                     LRRLARRWSDPD"
     gene            complement(2001..3143)
                     /locus_tag="VF061_10865"
     CDS             complement(2001..3143)
                     /locus_tag="VF061_10865"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX6670053.1"
                     /translation="MLDITEFFGDTTGGVRTYLLEKAKYVQRRPDLRQVLVVPGAADE
                     ILEASGVRCYRLHGPSIPTQKPYRFMLATRSTTRIVAHERPDLIEVGSAWCAPWLVHL
                     ATRGLRVPAVWFYHSNFPRIIAPRPHAAGWTRLTASALAWRYVRRLGGLVQATIAPTR
                     AVVRELESAGVANVVHVPLGVDLDRFNPGRRARAAETRRRFGLPDGPLALYVGRMAAE
                     KDIDILLEAWLEVERRTGARLVLVGSGPALRRLRRTRGGARAIWLPYQRDRDLLADLY
                     GAVNLYVAPGSAETFGLSAMEGLSSGLPVLSVDRGGVAEAVSLSGAGRLYTSGDRGHL
                     AECAVELLGRDLAPLGLVGRRYAEQHHGWDTVLDRLFQVYRVVLGG"
     gene            complement(3408..4052)
                     /locus_tag="VF061_10870"
     CDS             complement(3408..4052)
                     /locus_tag="VF061_10870"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX6670054.1"
                     /translation="MSVLDVVSLPNGQLSQNCYLVADRRTREAIIIDPGEEPAMFLAE
                     LDTRAWTLRAIWLTHAHVDHILGVGAVKRATGVPIHLHPRDRPIYDALPQFGAWLGRE
                     VEPPPPPDVDLAAGDRLRVGGLEFEVRFTPGHSPGSVSFVGQGRIFGGDVLFNGSVGR
                     TDLPGGDFETLMSSIHSQFLSLPDSTVVHSGHGPDTTIGIERLTNPFITGSVRA"
     gene            complement(4061..5143)
                     /locus_tag="VF061_10875"
     CDS             complement(4061..5143)
                     /locus_tag="VF061_10875"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX6670055.1"
                     /translation="MAENRKYDVVIIGAGPAGLAAALYAGRAMLRTVVLERGVPGGEL
                     LNTEYLDDVPGFPKVLGRDLAKKFYEHAQEFGAEFRLGTAVQQVKKRDGDGMFEVTTY
                     EDEVFEAPAVIVTAGGTPLKLGIPGELEYAGKGVSYCAVCDGAFFKEQHVVVVGGGDA
                     ACEEAEYLTRHASKVTLVHRRDTFRAAPIIQQRVLQNPKIEVVLNTVAEEVLGDPLTG
                     MTGLRVKDVLTGATRVIEASGLFVFIGFKPNTGVIANHYAHDAAGYVVTDLAMHSSIP
                     GLFVAGDMRAQLTRQVTTAQGDATTAAIAVYRYLTALRSGVEDPVRAVLGEIGVPRAR
                     APEGEAARGGAESYGQATDTPVLADR"
     gene            complement(5199..6011)
                     /locus_tag="VF061_10880"
     CDS             complement(5199..6011)
                     /locus_tag="VF061_10880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670056.1"
                     /translation="MADDSSARIELRDVAIVGGGCYGTFYAGQLIRAAERGKVRYRRL
                     LVVDRDPRCRFANEIGGAGDRELAVAEWGDFFDRWLDRPLGPPAGEGDAIVPSPLMPH
                     LMYEWLVRRARARWPGRSVEPRALTAPVGTPYDATGPDGTRYISFADWLCPTHCVEPA
                     TCPVIRAPRTWEMSDAMADLAARLNLTAPTAGPALFVCRHRVFGVGMFDAAAVLAGDR
                     LVAEAGSGPEEVDVLVGTVSACHGAVSLLHLGTAPASRPAAASSPQGAGRPG"
     gene            complement(5989..6720)
                     /locus_tag="VF061_10885"
     CDS             complement(5989..6720)
                     /locus_tag="VF061_10885"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX6670057.1"
                     /translation="MELRGRVALVTGAGRRLGRALAAGLAGRGMVLAIHHHSSSGGAE
                     ALREEVAAAGGRAECFAADLTDPRAARALPGQVVERFGRLDVLVNSAAVMQRLDFERT
                     TPEQYDAILDLNLRSVFFCTQGAAAALRAARGKVVNLADLAGLQPWPGFAAHSVSKAG
                     VVMLTKVLARSLAPEVTVNAIAPGAVLVPEEYDAEERARLARAAPLGRLGSPDDVVGA
                     LLYLLEAADFVTGEVLTVDGGRLLR"
     gene            complement(6720..>7017)
                     /locus_tag="VF061_10890"
     CDS             complement(6720..>7017)
                     /locus_tag="VF061_10890"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX6670058.1"
                     /translation="SIAYFEPQQPMAVYSAAKSAVAGFTRSLALELADRHIRVNAVAP
                     AAVRTSDNVAAMGAAAAYVELEDITDGVLHLASSESADVSGHILRIAPAASGGT"
BASE COUNT         1041 a         2527 c         2530 g          919 t
ORIGIN      
        1 cccggagcca gtccgccgcc tgcgccagct tctcccggtg gcgctgcacc gtgtggccat
       61 aggcggcgaa ctcctgcccc agccggatcg gcgtggcgtc ctggagatgc gtgcgcccgg
      121 acttgatgat gccgtcgaag gcgacaccct tggcaatcag cgagtgcgcc agctgctcca
      181 gtgcgagcag ggtcgcgggg agggtcgcca gggtggcgag ccgcatcgcg gtggggatca
      241 cgtcgttggt gctctgcgcc atgttgacgt ggtcgttggg atgcaccggc gcgtacgacc
      301 cacgcgccga acccaggatc tcgttggccc ggttggcgag cacctcattc acgttcatgt
      361 tgtggctggt gccggcgccg gcctggtaca cgtccacgat gaactggtcg cggtgctgac
      421 cggtgaggac ctcgtcggcg gcgcggacga tcgcatccgc caggcggggc tccagacggc
      481 cggtctcacg gtgggtcagc gccgcggagc gcttgatcca gacgaccgcg tccacgaagg
      541 ccggcagcgg ccgcagtccc gagatgggga agttttcggc tgcgcgcagc gtctggatgc
      601 cgtagagggc cgaggcgggc accgccttct cgcccagcgg gtcgcgctcc gtgcgggtgt
      661 cggtcatggg gcgtattcta gtccgggccc gccggatcgc cagtcgcggg cgtcgtcctt
      721 catcctcaac ctctttttcc cttcatgagc gactacttca ggagcgtgga ccgcagcgcc
      781 gccttcgatc agcacaaggc gagcaagacg gacctctgga ccggcgagcg gctgttcgtg
      841 ggcctcaact gcttcgaagc cggccagacc cagaaagtcc acgcccatgc cggggcggac
      901 aagttctact acgtctgctc gggacgggcg cggctgaccg tgggggagga gacgcgggag
      961 gtcgccgcgg gcgagatcgt ggtggcgccg gcgggggtcc ctcacggggt cgcggaggcg
     1021 ctggagcgca cggtgctcct agtcgggatc gctccaccgc cgcgctaggc ggcgcagggc
     1081 cggccacccg taggtgtgcg cggcgagccc gacgccgagc acgacgccga cgccattggt
     1141 gtagaatcgc caggcgagga ggagccaccc cgccctcccg ccgaggtctc ccgcggcccc
     1201 gcccaggaag cccagctcga ccgccccggc gcctgacggc gtgggcagga cgagctggct
     1261 gtagagcaag ccgaacgacc ccaccaggag cggcccgatc tccggcggcg acggcagggt
     1321 gagcgcgagc accgggagaa tggccacccg ggtcgccaga ttgaggaagg tgagggggag
     1381 gctcgcgacc agcggccaga gcggcattcg ccgccagtag accagcgccc gccggaccgg
     1441 gcgtcgcacg tggcgcaccg ccggcgacgc gatccgccgt gcataccacc acgcggcgac
     1501 actcagcagg gtcaccagca gcacccaggg ccaggctccc tgggccgcgg tcgccagctg
     1561 tggcccggcg gtgctccacc acgcaggcgc gtagcgccag atcagccacc ccgcggccac
     1621 gaggatcacc ggccaggcgg ccagcacttc gaggctgatg gcgacgaacg cggcggtggc
     1681 ggggactctg ctccggagca tccccgcgag ccgcgcgggc tcgccgccga ggcggagcgg
     1741 cgtcagcgcg caggcggcgt cgccgtaggc gttcagcacg aacgtgtccc agaaaccgat
     1801 ccgatgcccg agtccctgca cgatccactg gatccgccag gcgcgaacca ggagatcgat
     1861 cagaaccagc gcgatgcaga ggagggtagc ctcgaggagg gacatgggcc tgtcaccctg
     1921 agcggagcga aggggccagg agccggatca tgcccccctc gctgcgctcg gggtgacagt
     1981 ggtacctagc atccgccgca tcaccctccg agaacgaccc gatagacctg gaacagccgg
     2041 tccagcaccg tatcccagcc gtggtgctgc tcggcgtaac gccggcccac caacccgagc
     2101 ggggcaaggt cccggcccag cagctccacc gcgcactcgg ccaggtggcc gcggtcgccc
     2161 gaggtgtaca gccggccggc gcccgacaga ctcaccgcct cggccacccc gccccgatcc
     2221 accgagagca cggggagacc gctcgacagg ccctccatcg ccgagaggcc gaaggtctcc
     2281 gccgagccgg gagccacgta gaggttcacc gccccgtaaa ggtcggcgag gaggtcccgg
     2341 tcccgctggt agggcaacca gatggctcgg gcgccgcccc gggtgcggcg cagccgacgg
     2401 agtgcggggc ccgaaccgac cagcaccagg cgagcgccgg tgcgccgctc gacctcgagc
     2461 catgcctcca gcaggatgtc gatgtccttc tccgccgcca ttcggcccac gtagagcgcg
     2521 aggggaccgt ccgggagacc gaagcgacgc cgcgtctcgg cggcccgcgc ccgccgcccc
     2581 gggttgaagc ggtccaggtc cactcccagc gggacgtgga ccacgttcgc cacgccggcg
     2641 ctttccagct cccgcaccac cgcccgggtc ggggcgatgg tagcctgtac cagccccccc
     2701 agcctccgca catagcgcca agccagcgcg ctggccgtga gccgggtcca cccggcggca
     2761 tgcgggcggg gcgcgatgat gcggggaaag ttgctgtggt agaaccagac cgcgggcacc
     2821 cgcaggccgc gggtcgccag gtgcaccagc cacggggcgc accaggcact gccgacctcg
     2881 atgaggtcgg gccgctcgtg ggcgacgatc cgcgtcgtgg agcgggtggc cagcatgaag
     2941 cggtacggct tctgagtcgg gatcgagggt ccgtgcagcc ggtaacagcg gacgccgctc
     3001 gcctccagga tctcgtccgc cgctcccggg acgaccagca cctgccgcag gtcggggcgg
     3061 cgctgcacgt acttcgcctt ctccaggaga taggtccgca ccccgccggt cgtgtcgccg
     3121 aagaactcgg tgatgtcgag caccccgacg gacgcggtgg gtcgcaggcg cggcggcagg
     3181 tcgatccggg agatgtcgag cgggaccggc tcgacaccgg cgaccggctc gagatcgagg
     3241 attccggtcg ccgcgcgctc agtcagagca atctccgagc ggatagatgg tccggcagtt
     3301 gggacagggg ttcttgcagc cgaacgggcg ggaggccacc ctgcagccgc agcgctggca
     3361 ggacggtgcc ccgtcatccc gggtgcccgc gacggacggc acgtcggtca tgcccgcacg
     3421 cttcccgtga tgaacgggtt ggtcagccgc tcgatgccga tcgtggtgtc cgggccgtgg
     3481 ccgctgtgca cgaccgtgga atcgggcagc gagaggaact gcgagtggat cgaggacatc
     3541 agggtctcga agtcgcctcc cggcaggtcg gtccggccga ccgacccgtt gaagagcacg
     3601 tccccgccga agatcctccc ctgtccgacg aagctgacgc tgccggggga atggccgggg
     3661 gtgaaccgca cctcgaactc cagcccgccg acccggagcc ggtcgcccgc ggccaggtcc
     3721 acgtcgggcg gcggcggcgg ttccacctcg cggccgagcc aggcaccgaa ctggggcagg
     3781 gcatcgtaga tcgggcggtc gcgcggatgg aggtggatgg gcacgccggt ggcgcgcttc
     3841 accgccccca cgccgagtat gtgatccacg tgggcatgag tgagccagat ggcgcgcagg
     3901 gtccaggcgc gggtgtcgag ctcggccagg aacatggcgg gctcttcgcc cggatcgatg
     3961 atgatcgcct cccgggtgcg gcggtcggcg acgaggtagc agttctggga gagctgcccg
     4021 ttggggagcg agaccacgtc gagtacggac atcgctcccc tcagcggtcg gccagcaccg
     4081 gtgtgtcggt cgcctggccg tacgattcgg cgcccccgcg tgccgcctcg ccctcgggcg
     4141 cgcgggcccg cggcaccccg atctcgccca ggaccgcccg caccgggtcc tcgaccccgc
     4201 tccgcagggc cgtcaggtag cgatacacgg cgatggcggc ggtcgtggcg tcgccctggg
     4261 cggtggtcac ctgccgggtg agctgcgccc gcatgtcgcc ggccacgaag aggccgggga
     4321 tggaggagtg catcgccaga tcggtgacca cgtagcccgc ggcatcgtgc gcgtagtggt
     4381 tggcgatcac cccggtattg ggcttgaagc cgatgaagac gaagagcccg ctcgcctcga
     4441 tgacccgggt cgcgccggtc aggacgtcct tgacgcgcag cccggtcatg ccggtgagcg
     4501 ggtcgcccag tacctcttcg gcgaccgtgt tgaggacgac ctcgatcttg ggattctgca
     4561 gcacgcgctg ctggatgatc ggcgccgcgc ggaacgtgtc gcgccggtgg accagggtca
     4621 ccttcgacgc gtgccgggtg aggtactccg cctcctcgca cgcggcgtcg cccccgccga
     4681 cgaccacgac gtgctgctcc ttgaagaacg cgccgtcgca caccgcgcag taggacacgc
     4741 ccttcccggc gtactccagc tcgcccggga tacccagctt gagcggggtc ccgccggccg
     4801 tcacgatcac ggcaggggcc tcgaacacct cgtcctcata cgtggtgacc tcgaacatgc
     4861 cgtcgccgtc gcgcttcttc acctgctgca ccgccgtgcc cagcctgaac tcggcgccga
     4921 actcctgggc gtgctcgtag aacttcttcg ccaggtcccg gcccaggacc ttcgggaagc
     4981 cgggcacgtc gtccaggtat tcggtgttga gcagctcgcc tcctgggacc ccgcgctcca
     5041 ggaccacggt ccgcagcatg gcgcggccgg cgtacagcgc ggccgcgagc ccggctgggc
     5101 cggccccgat gatcaccacg tcgtacttcc tgttctcggc catcgcgctt ccccggttcg
     5161 gttgtccaaa tatagaacgc gcaagggttc ccggacgttc accccgggcg cccggcgccc
     5221 tggggtgagg acgcggcagc cgggcgggag gccggcgccg tccccaggtg cagcaggctg
     5281 acggccccgt gacaggccga taccgtgccc accaggacgt ccacctcctc cggccccgag
     5341 cccgcttcgg ccaccagccg atcccccgcc agcacggccg ccgcgtcgaa catccccacc
     5401 ccgaacaccc ggtggcggca cacgaacagg gccgggcccg ccgtcggggc cgtcaggttg
     5461 agcctggccg cgaggtcggc catcgcgtcg ctcatttccc aggtccgcgg cgcccggatc
     5521 acggggcagg tcgcgggctc gacgcaatgc gtcgggcaca gccagtcggc gaaggagatg
     5581 tagcgggtac cgtccgggcc ggtcgcgtcg tacggcgtgc caaccggggc ggtgagcgcg
     5641 cggggctcga cgctacggcc cggccatcgg gcccgcgcgc ggcggaccag ccactcgtac
     5701 atcaggtggg gcatgagggg cgagggcacg atcgcgtcgc cctcgccggc cggtgggccg
     5761 agtggacggt ccagccagcg gtcgaagaag tcgccccact cggcgaccgc gagctcgcgg
     5821 tcgcccgcgc cgccgatctc gttggcgaag cggcagcgtg gatcgcgatc caccaccagc
     5881 aggcggcggt aacgcacctt gccgcgctcc gcggcgcgga tcagctgtcc ggcgtagaac
     5941 gtgccgtagc agccgccgcc gacgatggcg acgtcgcgca gctcgatcct agcggaggag
     6001 tcgtccgcca tccacggtca gcacttcgcc ggtcacgaag tcggccgcct ccagcaggta
     6061 gagcagcgcg cccacgacgt cgtccggact gccgagccgc cccagcgggg ccgcccgggc
     6121 cagtcgcgcg cgctcctcgg catcgtactc ctccggcacc agcaccgcgc ccggcgcgat
     6181 cgcgttgacg gtgacctcgg gggcgagcga tcgggccagc accttcgtca acatcacgac
     6241 ccccgccttg ctcaccgaat gagcggcgaa tccgggccac ggctggagcc ccgccaggtc
     6301 ggccaggttc accaccttcc cgcgcgcggc gcggagggcg gcggcggcac cctgggtgca
     6361 gaagaagacg gagcggagat tgaggtcgag gatggcgtcg tactgctccg gcgtggtccg
     6421 ctcgaagtcc agccgctgca tgacggcggc cgaattcacc agcacgtcga gccggccgaa
     6481 cctctccacc acctggccgg gcagcgcgcg cgcggcccga gggtcggtga ggtcggcggc
     6541 gaagcattcg gcgcgtccgc cggcggcggc cacttcctcc cggagcgcct ccgcgccccc
     6601 ggaggatgag tggtggtgga tcgcgagcac catcccgcgc cccgcgagcc ccgccgccag
     6661 agcgcgcccg aggcggcggc cggccccggt gaccagcgcg accctgcccc gcagctccat
     6721 caggtcccgc cggaggcggc cggcgcgatg cgcaggatgt ggccgctgac gtcggccgac
     6781 tcggaactcg ccaggtgaag gaccccatcg gtgatgtcct ccagctcgac gtacgcggcg
     6841 gccgccccca tggcggcgac gttgtcgctg gtgcgcaccg ccgccggggc caccgcattc
     6901 acccggatgt gccggtcggc cagctcgagc gcgaggctgc gggtgaagcc cgcgaccgcg
     6961 gacttggcgg cgctgtacac cgccatcggc tgctggggct cgaagtaggc gatggag
//
LOCUS       DASUYN010000558        11776 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1059578, whole genome shotgun sequence.
ACCESSION   DASUYN010000558 DASUYN010000000
VERSION     DASUYN010000558.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 11776)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11776)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11776
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1059578"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1123)
                     /gene="dnaJ"
                     /locus_tag="VF061_10895"
     CDS             complement(<1..1123)
                     /gene="dnaJ"
                     /locus_tag="VF061_10895"
                     /EC_number="1.8.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF008035.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HEX6670059.1"
                     /translation="MTEFYQLLGLPRDCSEADIKKAYRKLAMEYHPDRNGSPDAEAKF
                     KEITEAYEVLRDPQKRAAYDRYGKAGVGSGQGGFGFHHVDLSEALNIFMRDFGGMGGF
                     ESIFGGGRRQDPRRGQDVRVTARLTLADIATGVKKSVKLKTLERCTVCAGSGAKPGTQ
                     PSRCTTCGGSGEVRRAARSMFGQFVSVSACPTCAGEGQVVLQPCEVCRGEGRVKGDRT
                     VTVEIPAGVSANNYLTLRGQGAAGPRNGPSGDLLVMLDVKNDDRFERHGDDLVHDLQV
                     SFSQAALGAQVTIPTVYGDEEIRIPPGTQPETVLRLKGRGLPVLGQSSKGDLLIRVRV
                     WTPERLSDEQERLFRQLAALEGEPPKRSPGFWSKLKEALG"
     gene            complement(1120..2157)
                     /gene="hrcA"
                     /locus_tag="VF061_10900"
     CDS             complement(1120..2157)
                     /gene="hrcA"
                     /locus_tag="VF061_10900"
                     /inference="COORDINATES: protein motif:HMM:TIGR00331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heat-inducible transcriptional repressor HrcA"
                     /protein_id="HEX6670060.1"
                     /translation="MPASDQLSERELRVLEAVVQTYIETAEPAGSQTIARRFGLGVSA
                     ATIRNTMSELEDKGFLFHPHTSAGRIPTDRAYRVYVNEIMRLAPPTDEARQTLRSELA
                     GSRNAVEEIVRRAAQVLGVLTQELGVAVSPALDELVLERLELVPVSTERLLLVFNLRS
                     GVLRSIFVEVPARVSTAAVQEVARILNERLAGLTLRQIRESIGERLRDAGHPAEEAEL
                     LNIFVAEREEIFDLSGETNSVVLGSAQMLAEQPEFASNARMRDLLRLTEGRDLLKQAL
                     AGRRRLGLSITIGNENPDTRLSEFTLVTSSYQAGELKGVIGVMGPTRMPYDKIIGLVE
                     HTSRMVEGLLE"
     gene            complement(2221..3321)
                     /gene="hemW"
                     /locus_tag="VF061_10905"
     CDS             complement(2221..3321)
                     /gene="hemW"
                     /locus_tag="VF061_10905"
                     /inference="COORDINATES: protein motif:HMM:TIGR00539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051989 - coproporphyrinogen dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HEX6670061.1"
                     /translation="MHLYLHVPFCARRCSYCDFAIAVRREVPTEAYVRAVLREWEGWQ
                     GHQSWSGSETVETVYFGGGTPSRLDPRGIAAILERIAADRQVSPEAEVTLEANPEDVT
                     PERAAAWAAAGVSRVSLGAQSFDAAVLTWMHRTHSAEQTEAAVEALRGSGIGELSLDL
                     IFGLPAALGRDWRADLERARALQPDHLSLYGLTVEDHTPLARWAARGEVVPVDEDRYA
                     AEFLEADATLTGAGFEHYEVSNYARPGRRARHNGAYWRRARFIGLGPSAHSGWDRYRQ
                     WNLREWSAWERAIAAGQSPVAGTECLDDEAVDLEEIYLGLRTREGVPAERLSPATAAA
                     WRSTGWAAASEGRIRLTPEGWLRLDALAAAAT"
     gene            complement(3363..4466)
                     /gene="dprA"
                     /locus_tag="VF061_10910"
     CDS             complement(3363..4466)
                     /gene="dprA"
                     /locus_tag="VF061_10910"
                     /inference="COORDINATES: protein motif:HMM:TIGR00732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009294 - DNA-mediated transformation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-processing protein DprA"
                     /protein_id="HEX6670062.1"
                     /translation="MDDQRAAYVALALTPGIGPSRLHAILEVCHTATGAFSAPFAFLR
                     TIPGMTAAAATAVATGSVEAGARAVERAERLGGRVLILEDPTYPALLRHIPEPAPVLF
                     ALGDLALMERPAVAIVGSRDHTPYGGEVARALGWGAASAGLAVVSGMARGLDAIAHDA
                     ALDAGGATIGVLGNGLGVIYPTANTRLYRRVAEHGLLLTEFPPGERPTAGSFPRRNRL
                     ISGLARVTVVVEAAEGSGALITAGTALEQGRDVMAVPGNITSPSSVGANRLIRDGAEP
                     LLSSDDLLDHYPEAIRPAEGFASRPATSQPLPEHLSADDRAVAELLGAEPTPLDALVN
                     RSGRSPQDVLAVLCTLEIAGVVEQQPGRRFRRL"
     gene            complement(4466..5494)
                     /gene="obgE"
                     /locus_tag="VF061_10915"
     CDS             complement(4466..5494)
                     /gene="obgE"
                     /locus_tag="VF061_10915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HEX6670063.1"
                     /translation="MFIDRAVVRVVAGTGGSGASSFARFKYKPKGGPDGGDGGHGGSI
                     HVRGDPNLATLLDYRYRNVWKAERGEHGKGKTQTGASSSDVYLPVPPGTVIRDADTGE
                     LLGEVLRAGDTIRVAKGGRGGRGNARFATPTHQAPREWEPGEEGEERSIELVLKLIAD
                     VGLVGEPNAGKSTLLSVISAARPKIADYPFTTLEPNLGVVGLSGHRSFVVADIPGIIE
                     GAHQGKGLGLRFLQHVERTRVLAYLVPLDSSDPQAAYARLRHEVRQYSDALAAKPHVV
                     LLTKRDLLPPEDAVPVLDAPEAAGILALSSAAGTGLEELKEYLWKFVETAKAEEAPVE
                     AWGEEGPE"
     gene            complement(5494..6135)
                     /locus_tag="VF061_10920"
     CDS             complement(5494..6135)
                     /locus_tag="VF061_10920"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEX6670064.1"
                     /translation="MAKQDNLDPQTRDLVRFAAAIAQGYEPELRDRVGPLRASQVPPA
                     WVEELLLQSVLMVGYPRALIAFAVWRKFSALAAPHADEGQDYGKVEEWTRRGEEVCAT
                     VYGENYSKLRDSVRLLHPAIDAWMITEGYGRTMGRSGLDLMRRELCTVAQTAVLEAPK
                     QLHSHLRGALNAGASFGQIDGVLSIVNPLLSFDQWKKIKELWRTVREGWSPGN"
     gene            6224..7738
                     /locus_tag="VF061_10925"
     CDS             6224..7738
                     /locus_tag="VF061_10925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670065.1"
                     /translation="MPRLRHAWLAAALLGALAPARGAAQSSPYIPLDDPRLPLLEHLI
                     ARGDVADPSPMVRPFRRADALRVLSGADTAGEAGAELVRRLREDLREPADSQRWLLAA
                     RAGAQAYTDIRRDLYHPVGPDGARPYADFTGEVSLGPFTMASRLAAEPRITDDPEWPG
                     RRDLDLAWRMPEAYLSAQFKYGSVFYGQLDRNWGPVGIEGIGLSAYGYAETELAFDIG
                     VDAVRLFASARTLEDARDGTGERIHRYFFAHRLGVRVTDRLRLGVWETTVLAGADREF
                     DGRYRNPLSLLLFTNQYGLGADGNVLFGLEGRYRIGKGTTLETQVGIDDLQYENPTGA
                     DRYPNRWAFTVAGFGPLGRRLSWRALYTQASSLAFRTLDPFENLTDGGVGLGRNFADM
                     DRVTLTVSVPVAARWLVTPELTLQRQGEGDITDPFPASPEEAGRLPHLFIGTVERTWR
                     AAVGVSGRQGPLDLQASAGLHRVVNAGHRAGDSDNRFVGRLQATLGLSRRGVIR"
     gene            7735..8766
                     /gene="rfaE1"
                     /locus_tag="VF061_10930"
     CDS             7735..8766
                     /gene="rfaE1"
                     /locus_tag="VF061_10930"
                     /inference="COORDINATES: protein motif:HMM:TIGR02198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose-7-phosphate
                     kinase"
                     /protein_id="HEX6670066.1"
                     /translation="MTHPPPLTRDRLLQLIERMKGSRVVVIGDIMIDRYLYGDTERLS
                     PEAPVPVVTVRERTAKLGGAANVAANVASMGATCLLVGTVGDDGDGATIRQELVVARL
                     DGRFVVTVAGRPTTSKTRIIARSQQIVRIDDEVDALLDGPDLERLVRTAGEALADADA
                     LLIEDYNKGTLAPGLIAEVMAVARRRGIPVVVDPKYRQFFAYAGATVFKPNRRELESA
                     LGAAVDLQNRNALPEVLARLKVDNLLVTLGADGMLLVTKDGGSLRIPSIAREVYDVSG
                     AGDTVTAWLGTALAAGASLAEAAQLANYAAGVEVSKPGVATVSPEEVLAVHEERFDQI
                     GRLRRGGVI"
     gene            complement(8763..9704)
                     /locus_tag="VF061_10935"
     CDS             complement(8763..9704)
                     /locus_tag="VF061_10935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670067.1"
                     /translation="MDFSPWLRARVRRGDVEAVGDYLWRIREANPGVGGSEEEFRQRF
                     QALAASLMEAPLDRHLLDGSEEGYLDLRVALILLAAHEGFSGFIMTGEAADFLAAAVS
                     PHAFTLTGADMLVEQRNEFVRKMASEMSYWSTWPPLVADALHPVVPPRDPELEAVLAR
                     LRPLPLGVRAHAGDVLRHLVADPTTPRTLASLSRYETRKRGLDVADSTRLIMDTGLVV
                     PATELKGWLAGWTRRDLLGFLAHCGVRPRNSWSKERLAEVAEAECAVALRQRMSESGV
                     VELSPGHVRGARLLREYLDGVKETWRVWLGFGTGVGA"
     gene            complement(10091..10618)
                     /locus_tag="VF061_10940"
     CDS             complement(10091..10618)
                     /locus_tag="VF061_10940"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX6670068.1"
                     /translation="MIWITRLPPREPVASADSSHDQRTALASPLPPPYVTVLVVDDER
                     ISRRVATRMLRELGLRVLEADGAEEALDVFRISQQPIDLVLLDVVMPETDGVELAEQI
                     LAHRPGQRIIFMSAYPAEVLAEHGLQDLEVLFLAKPYTLEELREKVRQAMERPPSPQQ
                     DPVWRARQESRQQEQ"
     gene            10667..11524
                     /locus_tag="VF061_10945"
     CDS             10667..11524
                     /locus_tag="VF061_10945"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEX6670069.1"
                     /translation="MSSLSRRRFVATSAMAAVAASIPFVRAEAEDDVRLTRLPVFVPN
                     LPDGLVGATIAQVTDLHLYGPEPHPAALGALAILERERPDLLVVTGDQWDHRSGAEGY
                     LAWLRARPRGLPAVAVIGNHEYATGRGSRADILRSVHRLHERGEAELLVNAATAIPVR
                     GSHLRVVGLDDLRHGEPRPEAAARAVDPAEPQLWLFHEPGQADRPGWPSTVAPFLMLA
                     GHTHGGQIRLPLVPAVTPSGSGNYLAGLYRTPRGPLYISRGVGTSGPRIRYRCPAEVA
                     LFQLHLGFS"
BASE COUNT         1649 a         4264 c         4169 g         1694 t
ORIGIN      
        1 cgccgagcgc ttccttgagc ttggaccaga atccgggcga gcgcttgggc ggctcaccct
       61 ccagggcggc gagctggcgg aagagccgct cctgttcgtc gctgagccgc tcgggggtcc
      121 agacccgcac ccggatgagg aggtcaccct tgctgctctg gccgagcacc gggaggccgc
      181 ggcccttgag ccggagtacg gtctcgggct gggtgccggg cgggatgcgg atctcttcgt
      241 cgccgtacac ggttgggatg gtgacctgcg cgccgagtgc cgcctgggag aaggagacct
      301 ggagatcgtg caccaggtcg tcgccgtgac gctcgaatcg gtcgtcgttc ttgacgtcga
      361 gcatcaccag gaggtcgccg gacgggccgt tgcgggggcc cgcggcgccc tggccccgca
      421 gggtcaggta gttgttggcc gacacgccgg ccgggatctc gaccgtgacg gtgcggtcgc
      481 ccttgacccg gccctcgccg cggcagacct cgcagggctg gagcaccacc tgaccctcgc
      541 cggcgcaggt ggggcaggcc gacaccgaca cgaactggcc gaacatgctg cgcgccgcgc
      601 ggcggacttc gccggagcct ccgcaggtgg tgcagcggct cggctgggtg ccgggcttgg
      661 ccccgctccc ggcgcagacg gtgcaccgct ccagcgtctt cagcttcacc gacttcttca
      721 ccccggtggc gatgtcggcc agggtgaggc gcgcggtgac gcgcacgtcc tgccctcgcc
      781 ggggatcctg tcgccgtccg ccgccgaaga tggactcgaa cccgcccatg ccgccgaagt
      841 cgcgcatgaa gatgttcagc gcctcggaca ggtccacgtg gtggaagccg aacccgccct
      901 ggccgctccc gaccccggcc ttgccatagc ggtcgtacgc cgcgcgcttc tggggatcgc
      961 ggagcacctc gtaggcctcc gtgatctcct tgaacttggc ctccgcatcg ggcgaaccgt
     1021 tgcggtccgg gtgatactcc atggccagct tccggtaggc cttcttgatg tcggcctcgg
     1081 agcagtcgcg gggcagtccc agcagttggt agaactcggt cactccagca atccttccac
     1141 catgcggctg gtgtgctcca ccagcccgat gatcttgtcg tacggcatcc gggtcgggcc
     1201 catcaccccg atgacgccct tgagctcgcc cgcctggtag gacgacgtga ccagcgtgaa
     1261 ctcgctgagc ctggtatcgg ggttctcgtt gccgatggtg atcgagagcc cgagccgccg
     1321 ccgtccggcc agcgcctgct tgaggagatc gcgcccttcg gtcagccgga gcagatcccg
     1381 catccgggca ttggaggcga actccggctg ctccgccagc atctgcgcgc tgccgagcac
     1441 gaccgagttg gtctcgccag agagatcgaa gatctcttcc cgctcggcca cgaagatgtt
     1501 gagcagctcc gcctcttccg ccgggtggcc cgcgtcgcgg agacgctcgc cgatggactc
     1561 gcggatctgc cgcagggtga gccccgcgag ccgctcgttg aggatccggg cgacctcctg
     1621 caccgcggcg gtcgagaccc tggcgggcac ctcgacgaag atgctccgca gcacgccgct
     1681 ccggagattg aagaccagca ggagccgctc ggtcgagacg gggaccagct ccagccgctc
     1741 cagcaccagc tcgtccagcg caggcgacac ggcgaccccc agctcctggg tcagcacccc
     1801 cagcacctgg gcggcccggc ggacgatctc ctcgaccgcg ttcctggagc cggccagctc
     1861 gctccggagc gtctgccgcg cctcgtcggt gggcggcgcg aggcgcatga tctcgttgac
     1921 gtagacccgg taggcccggt cggtcggaat ccggccggcg gaggtgtggg ggtggaacag
     1981 gaagcccttg tcctccagct cgctcatcgt gttgcggatg gtggccgcgg acacgccgag
     2041 accgaaccgc cgggcaatcg tctggctccc ggccggttcc gcggtctcga tgtaggtctg
     2101 aacgaccgcc tcgaggactc gaagctcccg ctcggacagc tggtctgacg ctggcatcac
     2161 ggggaattta gttgacttag accgggtcgc gtagactcgg gaagcggccc ggacccggcg
     2221 ctaggtcgcg gccgcggcga gggcgtcgag ccggagccag ccctccggcg tgagccggat
     2281 ccgcccttcg gaggcggcgg cccagcctgt ggagcgccag gcggccgcgg tggccgggga
     2341 aagacgctcc gcgggcacgc cctccctggt ccggaggccg aggtagatct cctccaggtc
     2401 gaccgcctcg tcgtctaggc actcggtccc ggcgaccggg ctctgaccgg ccgcgatcgc
     2461 tcgctcccaa gccgaccact cccgcaggtt ccactgccga taccgatccc acccgctgtg
     2521 agccgatggc ccgaggccga tgaaacgggc tcgccgccag tacgcgccgt tgtgccgcgc
     2581 gcgccggccc ggacgggcgt aattggagac ctcgtagtgc tcgaaccccg cgccggtcag
     2641 ggtggcgtcg gcctccagga actccgccgc gtagcggtcc tcgtccaccg ggaccacctc
     2701 gccccgcgcc gcccacctcg ccagcggagt gtggtcttcg acggtgagcc cgtacagcga
     2761 gaggtggtcg ggctgaagag cgcgggcccg ctcgagatcg gcgcgccaat cccggcccag
     2821 cgcggcaggc aggccgaaga tgaggtcgag cgacagctcg ccgatgccgg acccccgaag
     2881 agcctcgacc gccgcttcgg tctgctccgc cgagtgggtc cggtgcatcc aagtcagtac
     2941 cgcggcgtcg aaggactggg caccgaggga gacacggctc acgccggcgg cggcccaggc
     3001 ggccgctcgc tcgggtgtga cgtcttccgg gttcgcctcg agcgtcactt ccgcctcggg
     3061 cgacacctgc cggtccgccg cgatccgctc gaggatggcc gctatgccgc gaggatccag
     3121 ccgcgacggc gttcctccgc cgaagtacac cgtctccacc gtctccgagc cgctccagct
     3181 ctggtgcccc tgccacccct cccactcgcg caggaccgcg cgcacgtagg cctcggtcgg
     3241 cacctcgcgc cgcacggcga tggcgaaatc gcagtagctg cagcgccggg cgcagaacgg
     3301 gacgtggaga tagaggtgca cgaggctgaa tctatcctct gccccggccc tcgcggccgg
     3361 agtcagagac gccggaaccg ccgcccgggc tgctgctcga ccacaccggc gatctcgagg
     3421 gtacagagca cggccagcac atcctgcggg ctgcgccccg agcgattgac gagagcgtcg
     3481 agcggcgtcg gctccgcgcc gagcagctcg gccacggccc ggtcgtccgc cgacaggtgc
     3541 tcgggaagcg gctggctggt ggccggccgg gaggcgaatc cctccgccgg ccggatggct
     3601 tccgggtagt ggtccagcag atcgtccgac gagagcagcg gttcggcgcc gtcgcggatc
     3661 aggcggttgg cgccgaccga ggacgggctg gtgatgttgc cgggcacggc catgacgtcc
     3721 ctgccctgct ccagcgcggt gccggccgtg atgagggcgc ccgagccttc cgccgcctcc
     3781 accaccacgg tgacgcgggc gaggccgctg atgaggcggt tgcgccgggg aaagctgccg
     3841 gcggtgggcc gctcgccggg cggaaactcg gtgagcagga gcccgtgctc cgcgacccgc
     3901 cggtacagcc gggtgttggc ggttggatag atgacgccga ggccgttgcc gagcacgccg
     3961 atggtggccc cgccggcgtc gagcgccgca tcgtgagcga tcgcgtcgag cccccgcgcc
     4021 atgccgctca cgaccgccag ccccgccgag gcggcacccc agccgagcgc ccgcgccact
     4081 tcgccaccat acggcgtgtg gtcccggctg ccgacgatcg ccaccgccgg ccgctccatc
     4141 agcgcgagat cgccgagggc gaagagcacc ggcgcgggct cgggtatgtg gcgcaggagc
     4201 gccgggtagg tcgggtcctc gaggatcagg acccgcccgc cgagccgctc cgctcgctcc
     4261 acggcccgcg ccccggcttc gacgcttccc gtggcgacgg cggtggctgc ggcggccgtc
     4321 atccccggga tggtccgcaa gaatgcgaac ggcgccgaaa aggcgccggt tgcggtgtga
     4381 cagacctcga ggatcgcgtg gagccggctc gggccgatgc ccggggtgag cgccagcgcc
     4441 acgtaggcgg cgcgctggtc gtccactact cgggtccctc ctccccccat gcctccacgg
     4501 gcgcctcctc ggccttggcg gtctccacga acttccagag atactccttc agctcctcga
     4561 gtccggtacc cgccgcgctg gagagggcga gaattcccgc ggcctccggc gcgtccagca
     4621 ccggcaccgc gtcttccggc ggcaggagat cgcgcttggt cagcagcacc acatgcggct
     4681 tggcggcgag cgcgtcgctg tactggcgca cctcgtgccg cagccgcgcg tacgccgcct
     4741 gcggatcgga gctgtcgagc gggacgaggt aggccagcac gcgggtgcgc tccacgtgct
     4801 gcaggaagcg aagcccgagg cccttgccct ggtgcgcgcc ttcgatgatg ccggggatgt
     4861 cggcgacgac gaagctccgg tgccccgaca gaccgaccac gccgaggttg ggctccagcg
     4921 tggtgaaggg atagtcggcg atcttggggc gagcggcgga gatgacggag aggagggtgc
     4981 tcttgcccgc gttgggctca cccacgaggc cgacgtcagc gatcagcttg aggaccagct
     5041 cgatcgagcg ctcctcgccc tcttcgccgg gctcccactc ccgcggcgcc tggtgggtcg
     5101 gcgtggcgaa ccgcgcgttg ccccggccgc cgcggccgcc cttcgccacc cggatggtgt
     5161 cgcccgcccg gagcacttca cccagcagct ccccggtgtc ggcatcccgg atcacggtgc
     5221 cgggcgggac gggcaggtag acgtcggacg acgatgcccc ggtctgggtc ttgcccttgc
     5281 catgctcgcc ccgctccgcc ttccacacgt tgcggtatcg gtagtccagc agcgtggcga
     5341 ggttggggtc gccgcggacg tggatgctgc cgccgtgccc gccgtctccc ccgtccggcc
     5401 cgcccttcgg cttgtacttg aagcgggcga aggagctggc gccggatccc ccggtgccgg
     5461 ccaccacccg cacgaccgcc cgatcgatga acatcagttc cccggcgacc agccctcgcg
     5521 gacggtgcgc cacagctcct tgattttctt ccactggtcg aaggacagga gcgggttcac
     5581 gatcgagagc acgccgtcga tctggccgaa cgaggctccg gcgttcagcg caccgcggag
     5641 gtgcgagtgc agctgcttgg gcgcctccag cacggcggtc tgggcgacgg tgcagagctc
     5701 gcgccgcatc aggtcgagcc cggaacggcc catggtgcgg ccgtagccct cggtgatcat
     5761 ccaggcgtcg atggccgggt gcagcaggcg gacgctgtcg cgcagcttgg agtagttctc
     5821 gccatacacc gtggcgcaga cttcctcgcc ccgccgggtc cactcctcca ccttcccgta
     5881 gtcctgcccc tcgtcggcgt ggggtgccgc cagcgcgctg aacttgcgcc acacggcgaa
     5941 ggcgatgagc gcgcgcggat accccaccat cagcaccgac tggagcagca gctcctcgac
     6001 ccacgcgggc gggacctgcg aggcgcggag cggcccgacc cggtcgcgca gctcgggctc
     6061 gtagccctgc gcgatggccg cggcgaagcg gaccaggtcc cgtgtctggg gatccagatt
     6121 gtcttgtttc gccatgccga gctacctcca ttggtggtca caagataatt gccctggtcc
     6181 cgcctttgac tctcatgccg cgatcctgtt cctttccccg ccgatgcccc gcctccgtca
     6241 cgcctggctc gccgccgccc tcctcggtgc gctcgccccc gcgcgcggcg cggcccagtc
     6301 gtcgccctac atcccgctgg acgacccccg gctccccctg ctcgagcacc tcatcgcccg
     6361 cggcgacgtc gccgatccct cccccatggt gcgcccgttc cgccgggccg acgcgctccg
     6421 cgtgctgagc ggtgccgaca ccgccggcga ggcgggcgcg gagctggtcc ggcggctccg
     6481 ggaggacctc cgggagccgg ccgactccca gcgctggcta ctcgccgccc gcgccggcgc
     6541 ccaggcgtac accgacatcc gccgtgacct ctaccatccc gtcggtcccg acggcgcgcg
     6601 gccctacgcc gacttcaccg gcgaggtcag tctcggtccc ttcaccatgg ccagccgcct
     6661 ggctgccgag ccccggatca ccgacgatcc ggagtggccc ggccgccgcg acctcgacct
     6721 ggcgtggcgg atgcccgagg cgtacctcag cgcccagttc aagtacggca gcgtgttcta
     6781 cgggcagctg gaccggaact ggggcccggt gggcatcgag gggatcggcc tcagcgccta
     6841 cggctacgcc gagaccgagc tggcgttcga catcggcgtg gacgcggtgc ggctcttcgc
     6901 ctccgcgcgc acgctggagg acgcccgcga cggcacgggc gagcggattc accgctactt
     6961 cttcgcccac cggctcggcg tccgcgtcac cgaccgcctg cgcctggggg tgtgggagac
     7021 gacggtgctg gccggcgccg accgcgagtt cgacgggcgc taccgcaacc cgctgagcct
     7081 gctcctgttc accaaccagt acggcctcgg cgccgacggg aacgtgctgt tcgggctcga
     7141 ggggcggtac cgcatcggca aggggaccac gctcgagacc caggtgggca tcgacgacct
     7201 ccagtacgag aaccccaccg gcgccgaccg gtatcccaat cggtgggcgt tcaccgtggc
     7261 gggcttcggt cccctgggcc gacggctgag ctggcgggcg ctctacaccc aggcatccag
     7321 cctcgccttc cgcaccctgg atccgttcga gaacctgacc gacggcggcg tcggcctggg
     7381 ccgcaacttc gccgacatgg accgggtgac gctgacggtg agcgtcccgg tcgccgcccg
     7441 ctggctcgtc acccccgagc tgacgctgca gcggcagggc gagggcgaca tcaccgaccc
     7501 cttccccgcc tcgcccgagg aggccggccg gctgccgcac ctcttcatcg gcaccgtgga
     7561 gcgcacctgg cgcgcggcgg tcggggtgag cgggcgacag gggccgctcg acctccaggc
     7621 ctccgcggga ctgcaccggg tggtgaacgc cggccatcgg gccggtgaca gcgacaaccg
     7681 cttcgtgggc cggctccagg cgacgctggg gctgagccgc cggggagtga tccgatgacc
     7741 catccgccgc cgctgacccg cgaccggctg ctccagctca tcgagcggat gaagggcagc
     7801 cgcgtcgtcg tgatcggcga catcatgatc gatcgctacc tctacggcga taccgagcgg
     7861 ctctcccccg aggcccccgt gcccgtggtc accgtccgcg agcgcaccgc gaagctcggc
     7921 ggcgcggcca acgtggcggc caacgtggcc tcgatgggcg ccacctgcct gctggtgggc
     7981 acggtcggcg acgacgggga cggcgcgacg atccggcagg agctggtcgt ggcgcggctg
     8041 gacgggcggt tcgtggtgac ggtggcgggg cggcccacca cgtccaagac ccggatcatc
     8101 gcccgctcgc agcagatcgt ccggatcgac gacgaggtgg acgcgctgct cgacgggccc
     8161 gacctcgagc ggctggtccg gaccgccggt gaggcgctgg ccgacgccga cgcgctcctg
     8221 atcgaggact acaacaaggg caccctggca cccgggctca tcgccgaggt gatggcggtg
     8281 gcccggcggc ggggcatccc ggtggtggtg gatcccaagt accgccagtt cttcgcctac
     8341 gccggcgcca cggtgttcaa gcccaaccgc cgggagctgg agtccgcgct gggcgcagcc
     8401 gtggatctcc agaaccgcaa cgcgctgccc gaggtgctgg cgcgcttgaa ggtggacaac
     8461 ctgctggtga cgctgggcgc ggacgggatg ctgctggtga cgaaggacgg cggctcgctc
     8521 aggatcccca gcatcgcccg cgaggtctac gacgtgtcgg gcgcggggga cacggtgacg
     8581 gcgtggctgg gaacggcgct cgcggcgggc gcctcgctgg cggaggcggc gcaactcgcg
     8641 aactacgcgg cgggcgtgga agtgagcaag ccgggcgtgg cgaccgtgtc accggaggaa
     8701 gtgctggcgg tgcatgagga acggttcgat cagatcggga gactgcggcg cgggggcgtg
     8761 atctaggcgc cgaccccggt cccgaagccg agccacaccc gccaggtctc cttcacgccg
     8821 tcgaggtact cccgcagcag gcgggccccc ctgacgtgcc ccggactcaa ctccaccacc
     8881 cccgactcgc tcatccgctg gcgcagcgcc accgcgcact ccgcctccgc cacctcggcg
     8941 aggcgctcct tgctccagga gttccggggg cggacaccgc agtgggcgag gaaaccgagc
     9001 aggtcgcgcc gggtccagcc cgccagccat cccttcagct cggtggcggg aaccaccaga
     9061 ccggtatcca tgatgagccg cgtggagtcg gccacgtcga gcccccgctt gcgggtctcg
     9121 taccggctca ggctcgcgag ggtgcgaggg gtggtcggat cggcgaccag gtgccggagc
     9181 acgtcgcccg cgtgggcgcg cacgccgagc ggcagcgggc ggagccgcgc gaggacggcc
     9241 tcgagctccg ggtcgcgcgg cgggacgacg gggtgcagcg cgtccgcgac caggggaggc
     9301 caggtggacc agtagctcat ctcgctggcc atcttgcgga cgaactcgtt gcgctgctcc
     9361 accagcatat cggcgccggt gagggtgaag gcgtgggggc tgacggcggc ggcgaggaag
     9421 tcggccgctt cgcccgtcat gatgaaaccg gagaatcctt cgtgggccgc caggagaatg
     9481 agggcaacgc ggagatcgag gtagccctcc tcgctgccgt cgaggaggtg gcggtcgagc
     9541 ggcgcctcca tgagggacgc cgccagcgcc tggaagcgct ggcggaattc ctcctccgag
     9601 ccacccacgc ccggattcgc ctcgcggatg cgccagaggt agtcgccgac cgcctcgacg
     9661 tcgccgcggc gcacccgcgc ccgcagccag ggcgagaagt ccacacaggg gacgcagctc
     9721 gaggggttgt gtgcccgcga gagacaggga aagtccggat ggccgacccc gccggtgaag
     9781 ccggggagat cagcggagac tcgatcggcg agagtcacag ccgtcgagcc gaaatcgaga
     9841 gtcatcgtca cgagcgaccc aggtttcggt tcgaatcagg tcacgggctc cggtcgagcg
     9901 ggacgcgcca cgccgcgtcg ccctcgccgg ccccgggccg ggagatccag atatcttgac
     9961 cggccctgcc gatttggcaa gggtaagcca agcaccaatc tgtgcgggac gattcaaccg
    10021 gccggcaacc gcggccggtg tcctgacccg cctccacggg gccgagcggc ccggtctcgc
    10081 gtggaagcgg ttactgctcc tgctgccgcg actcctgtct cgcacgccag accgggtcct
    10141 gctggggcga gggcggacgc tccatcgcct ggcgtacctt ctcccgcagc tcttccagcg
    10201 tatagggctt cgcgaggaag agcacctcga ggtcctggag tccgtgctcg gccagcactt
    10261 cggccgggta ggcggacatg aagatgatcc gctggcctgg acggtgagcc aggatctgct
    10321 cggccagctc caccccgtcg gtctccggca tgaccacgtc gagcagcacc aggtcgatgg
    10381 gctgctgcga gatccggaag acgtccaggg cctcctccgc tccatccgcc tccagaaccc
    10441 tgaggccgag ctcgcgcagc atacgagtgg caacacgtct ggagatacgc tcgtcgtcca
    10501 ccacgaggac ggtgacatag gggggcggaa gggggctggc caatgcggtc ctttggtcgt
    10561 gagatgagtc cgccgaagct acaggctccc ggggcggaag gcgtgtgatc cagatcacat
    10621 ttccggaaac tcacattggc acgatcctcg ctgacgcccc cgcgccatgt cgagtctctc
    10681 ccgccgccgg ttcgtggcca ccagcgcgat ggctgcagtc gccgcctcca tccccttcgt
    10741 cagggcggag gcggaggatg acgtccgcct gacccgcctg ccggtgttcg tgccgaacct
    10801 gccggacggg ctggtgggag ccacgatcgc acaggtgacc gacctccacc tctacggccc
    10861 ggagccgcac cctgccgccc tcggcgcgct cgcgatcctg gagcgggagc gccccgacct
    10921 cctggtcgtg accggcgacc agtgggacca ccggagcggc gccgaggggt acctggcctg
    10981 gctccgggcc cgtccccggg gactgccggc ggtggcggtg atcggcaatc acgagtacgc
    11041 gacgggccgt gggagccgcg ccgacatcct gcgctcggtg caccggctcc acgagcgcgg
    11101 cgaggccgag ctgctggtga atgccgcgac cgcgatcccg gttcgagggt cgcacctgcg
    11161 ggtggtcggc ctggacgacc tgcgccatgg ggagccccgg cccgaagcgg ccgcccgggc
    11221 cgtggacccc gccgagcccc agctctggct cttccacgag ccggggcagg cggaccggcc
    11281 cgggtggccc tccaccgtcg cgccgttcct catgctggcg gggcacaccc acggcgggca
    11341 gatccggctc ccgctggtcc cggcggtcac cccgagcggc agtgggaact acctcgccgg
    11401 cctgtaccgc acgccgcggg ggccgctcta catctcgcgg ggcgtgggca ccagcgggcc
    11461 ccggatccgc taccgctgtc ctgcggaagt ggcgctcttc cagctccact tgggattctc
    11521 ttgatgggca ggtcgcatcc ttcgctcgac ctgctatccg gagtccgcca tgccccagga
    11581 agtgaagctc ctcgatcggc cgggggagga ccaattcgac atccctctcg tggtcggatg
    11641 gttggtggcc gcctgcacct gggtcgcgtc cgccggccgg agactcagta gggcgactcg
    11701 agtccggtca cgacccggta cgcatcccgc gcgatgagca gctcctcgtc ggtcggcacg
    11761 acccagagct cgaggc
//
LOCUS       DASUYN010000559         2139 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_176043, whole genome shotgun sequence.
ACCESSION   DASUYN010000559 DASUYN010000000
VERSION     DASUYN010000559.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2139)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2139)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2139
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_176043"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..723
                     /locus_tag="VF061_10950"
     CDS             <1..723
                     /locus_tag="VF061_10950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670070.1"
                     /translation="ITGAIVGRQPFGGWKASSVGPGAKAGGPGYVSQLVRWRQASLPA
                     AGVESLPGPVVALLERCLAELSDADARALVGASAASYAGAWREHFSREHDPMAIPGER
                     NTFRYRPCRRVIARGTTTAALGQVVLAACVVGTPLTVSLSPDAEPWPWLADCDGIELV
                     VEAEAGFVERLAHPGDAERVRVWAPISTAARAAANGTGLAVVDAAVLASGRLELRWYL
                     REQTVSRVLHRYGSLTESAATE"
     gene            747..1160
                     /locus_tag="VF061_10955"
     CDS             747..1160
                     /locus_tag="VF061_10955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670071.1"
                     /translation="MRDERLPTTTAEPGPSLVTWTHAIYALHAFSLLTGIIGAATVVG
                     AFLTGWPSLIAVILNYVKRSEARGTWLESHFRWQIRTFWFGLLWVALCLLFVVATLGI
                     GLLIAWLPLAVVGLWFIYRIVRGWLALIDRRPVYA"
     gene            1213..2061
                     /locus_tag="VF061_10960"
     CDS             1213..2061
                     /locus_tag="VF061_10960"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX6670072.1"
                     /translation="MSVRTRDGVLLAGVMAEPRRRRGPALVWVHGLGSAFASGQPLIR
                     ELSARLTAAGIGYLKLNTRGHDVVARAGRRLAGAAFERFGASVEDLRAAIMLARRAGY
                     RRVILAGHSTGANKVLHYAARVRDRRVGGVILLGPISDIAGETKRIGRRELRRRVATA
                     ERTARRDPDALVPRAFGFWSARRYISLYRPGEAEDVFPYDRPDARWTALRRVRLPLAV
                     FLGSRDEYLDRRPSEVVNAFERNATRARSFTGIVVPGADHGFAGHEATLARSIVRWVT
                     VVDRSR"
BASE COUNT          240 a          797 c          791 g          311 t
ORIGIN      
        1 atcaccgggg cgatcgtcgg ccgccagccc ttcggcggct ggaaggcctc gtcggtcggg
       61 cccggagcca aggcgggcgg ccccggctac gtctcccagc tcgtgcgctg gcgacaggcc
      121 tcgcttcccg ccgccggcgt cgagtcgctc ccggggccgg tggtcgccct gctcgagcgc
      181 tgcctggccg agctgtccga cgccgacgcg cgcgccctcg taggggcgag cgcggcgagc
      241 tacgcgggcg cctggcgaga gcacttcagc cgcgagcacg acccgatggc gatcccgggc
      301 gagcggaaca cgttccggta ccgcccctgc cgccgcgtga tcgcgcgggg cacgaccacc
      361 gccgcgctgg gccaggtcgt cctggcggcg tgcgtggtgg gcacgccgct caccgtgagc
      421 ctctcgccgg acgccgagcc ctggccgtgg ctggccgact gcgacgggat cgagctggtg
      481 gtggaggccg aggcgggatt cgtcgagcgc ctggcgcatc cgggcgacgc ggagcgcgtg
      541 agagtgtggg cgccgatctc gaccgcggcc cgcgccgccg ccaacggcac cggcctcgcc
      601 gtcgtcgacg cggccgtgct ggccagcgga cgcctggagc tgcggtggta cctgcgggag
      661 cagacggtct cccgggtcct gcaccgctac ggcagcctga cggagtctgc cgccaccgag
      721 tgagacgcct ggggcacaat atgaccatgc gtgacgagcg cctcccgacc acgaccgcgg
      781 agccgggccc gtcgctggtc acctggacgc acgccatcta tgcgctgcac gccttcagcc
      841 tgctcacggg gatcatcggc gccgccaccg tggtgggagc gttcctcacc ggctggccgt
      901 ccctcatcgc cgtgatcctg aactacgtca agcggagcga ggcgcggggg acgtggctgg
      961 agtcgcactt ccggtggcag atccgcacgt tctggttcgg cctgctgtgg gtggcgctct
     1021 gcctgctctt cgtggtggcc acgctcggca tcggcctgct catcgcctgg ctgcctctcg
     1081 ccgtcgtcgg gctgtggttc atctaccgca tcgtgcgcgg ctggctcgcg ctgatcgacc
     1141 ggcgcccggt gtacgcgtag ccgccggccc ggccaccgtc ccgcgatggg ctccggcgtt
     1201 ccggtctcgc tggtgagtgt ccgcacgcgt gacggagtgt tgctggcggg cgtgatggcc
     1261 gagccgaggc gccgccgggg gcccgcgctc gtctgggtgc acggcctggg gtccgcgttc
     1321 gcctccgggc aaccgctcat ccgcgagctg tcggcgcgcc tcaccgcggc ggggatcggt
     1381 tacctgaagc tcaacacccg ggggcacgac gtggtcgcgc gcgccggccg ccgactggcc
     1441 ggcgccgcgt tcgagcgctt cggcgccagc gtcgaggatc tccgggcggc gatcatgctg
     1501 gcccgccggg ccggctaccg ccgggtgatt ctcgccgggc actcgaccgg ggccaacaag
     1561 gtcctgcact acgcggcccg ggtccgcgac cggcgcgtcg gcggggtgat cctgctcggg
     1621 ccgatctcgg acatcgccgg cgaaacgaag cggatcggtc gccgcgagct ccgccgccgc
     1681 gtggccaccg ccgagcggac cgcccggcgc gacccggacg cgctggtccc gcgcgcgttc
     1741 ggtttctgga gcgcccgacg ctacatcagc ctgtaccggc cgggagaggc cgaggatgtg
     1801 tttccctacg accgccccga tgctcggtgg accgccctcc ggcgcgtgcg cctgcccctg
     1861 gcggtcttcc tcggcagccg cgacgagtat ctcgaccgcc ggccgtcgga ggtcgtgaac
     1921 gccttcgagc ggaacgcgac ccgggcgcgc tcgttcaccg gcatcgtcgt ccccggcgcc
     1981 gatcacggct tcgcgggcca cgaggcgacc ctggcccgct cgatcgttcg ctgggtgacg
     2041 gtagtggacc gctcgcgctg accgagccgg ataccatggc gcgcacaccc agcgcgtcgc
     2101 cacgcggccc gatcgtctca cgcgcggagt gcacgacgg
//
LOCUS       DASUYN010000560         2325 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_836703, whole genome shotgun sequence.
ACCESSION   DASUYN010000560 DASUYN010000000
VERSION     DASUYN010000560.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2325)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2325)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2325
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_836703"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..527
                     /locus_tag="VF061_10965"
     CDS             <1..527
                     /locus_tag="VF061_10965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670073.1"
                     /translation="ARGDTTGQWMLDYPFPYDSAPVGRAVRTLAGSLARAITAPTTET
                     FTAVARDREVLRRLLSADDDRYLEFQLWQEGVSRFVELAAAEAAAKAGKPAPAFRRLP
                     DYLPYAELAARLRRELERELAGINLAGERRVSFYPLGAGLALLLERTGPEWRRRYEAH
                     PFSLPVPARSRLSP"
     gene            complement(590..859)
                     /locus_tag="VF061_10970"
     CDS             complement(590..859)
                     /locus_tag="VF061_10970"
                     /inference="COORDINATES: protein motif:HMM:NF040444.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6496 domain-containing protein"
                     /protein_id="HEX6670074.1"
                     /translation="MAARKKSTSRKSSKRRYGKGASKSVESAMRRRKSGTLRRGKGGR
                     GGKVKSRKQAVAIGLSEARKKGAKVPAKKSGRRKSTRKKSSKRSS"
     gene            1152..1553
                     /locus_tag="VF061_10975"
     CDS             1152..1553
                     /locus_tag="VF061_10975"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX6670075.1"
                     /translation="MSGIREVFPYLIVHDAPAAIEFYRAVFGAEERLRIPDAGNGRVG
                     HAELTLGPAIIMLADEYPELGIRSPIAFGGTGLRMHLHVDDLDALAERAVQAGATMVS
                     EPRDYEHGERQCRIRDPFGHEWLLGQDISGK"
     gene            complement(1561..>2325)
                     /locus_tag="VF061_10980"
     CDS             complement(1561..>2325)
                     /locus_tag="VF061_10980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670076.1"
                     /translation="EIEAGTHPHNLVVAPDGMVWFTGNRNGRLVKLDPKTRKLTNYPM
                     PDPKVSDPHTMVLDQAGNAWFTAQQAGVVGRLDAKTGKIRLWEMGSGTRPYGIEVDAE
                     QRPWYVLFGTNVIGTIDPATLQERRYDLPEGARARRLTVMKDAVWYGDYARGYLGRLD
                     PKTSKVTEFVMPGARSSLPYAMAGDDQGRIWLAETGVQPNRLVGFDPAAGRFTQTVDT
                     EGGDEPNTIRHMVFHKPTREIWYGTDRNTVGRLPVP"
BASE COUNT          313 a          837 c          781 g          394 t
ORIGIN      
        1 tggcgcgggg cgataccacc ggccagtgga tgctggacta tcccttcccc tacgactcgg
       61 caccggtggg gcgggccgtg cggacactgg ccgggtcgct cgcgcgggcc attaccgctc
      121 caaccaccga gacgttcacc gccgtggcgc gagaccggga ggtgctccgc cgcctcctgt
      181 cggccgacga cgaccgctat ctcgagttcc agctctggca ggagggtgtg tcacgcttcg
      241 tggagctcgc cgcggccgaa gcggccgcga aggcagggaa accggccccc gcgttccggc
      301 ggctgccgga ctacctgcct tatgccgagc tggccgcccg cctgcgccgc gagctggagc
      361 gcgagctggc cgggatcaac ctggccgggg agcggcgcgt ctcgttctac ccgctcggcg
      421 ccggcctggc cttgctgctc gagcggaccg gccccgagtg gaggcggcgg tacgaggcgc
      481 atcccttctc gctgccggtg ccggcccgat cgcgcctgtc accctgaacg aagtgaaggg
      541 ggccataccg agcatggtcc ccttcgttac gctcagggtg acacgagaat cagctggagc
      601 gcttgctgct cttcttccgg gtgctcttcc gcctgccgct cttcttcgcg gggaccttgg
      661 cgcccttctt ccgcgcctcc gagagcccga tcgcgaccgc ctgcttgcgg ctcttcacct
      721 tgccgccgcg gccgcccttc ccgcggcgga gcgtcccgct cttgcgccgg cgcatcgcgc
      781 tctccacgct cttgctcgct cccttgccgt accgccgctt gctcgacttg cgtgaggtgc
      841 tcttcttcct ggccgccatg acgactcccg gttgggggac acgggggaat ctgagcggag
      901 ccggcctcac gatccagcgt ccaatctcga tgcgggcggc ggcgcgttga agctcaagca
      961 tccacccggc gcctggaggg cataccgacg gcggggtaac ttcgtctaca tggggatcac
     1021 ggcacgctac ttcgacgccg agtcggcctg agcgcgcagt tttttcccca gaccgccggc
     1081 ggcagcccga gtcatcttgg acccgagcac agccagcggg gcgaacggca tcggtcgagg
     1141 agcgagccgt catgtccgga atacgcgagg tctttcccta cctgatcgtg cacgacgcgc
     1201 ccgccgcgat cgagttctac cgcgccgtct tcggcgcgga ggaacggctg cggatacccg
     1261 atgccgggaa cggccgggtg ggccacgcgg agctgaccct gggcccggcc atcatcatgc
     1321 tcgccgacga gtaccccgag ctgggcatca ggagccccat cgcgttcggc ggcaccggtc
     1381 tgcggatgca cctgcacgtg gacgacctgg acgcgctggc cgagcgggcg gtgcaggcgg
     1441 gcgcgacgat ggtgagcgag ccccgggact acgagcatgg cgagcgccag tgtcgcatcc
     1501 gcgacccgtt cggacacgaa tggctcctgg ggcaggacat ctcggggaag tagtggccgc
     1561 tcacggcacc gggagccgcc ccacggtgtt gcggtcggtg ccgtaccaga tctcccgggt
     1621 cggcttgtgg aataccatgt ggcggatcgt gttgggctca tcaccgccct cggtgtccac
     1681 cgtctgggtg aacctgcccg cggccggatc gaagccgacc agccgattgg gctgaacccc
     1741 ggtctccgcc agccagatgc gcccctggtc gtcacccgcc atcgcgtacg gcagcgacga
     1801 cctggccccc ggcatcacga actcggtcac cttgctcgtc ttgggatcca gcctgccgag
     1861 ataaccgcgg gcgtagtcgc cgtaccagac cgcgtccttc atcaccgtga gccgtcgcgc
     1921 ccgcgccccc tcgggcaggt cgtagcggcg ctcctgcagg gtggcggggt cgatggtgcc
     1981 gatcacgttg gtcccgaaca gcacgtacca ggggcgctgc tcggcatcca cctcgatgcc
     2041 gtacggacgg gtgccgcttc ccatctccca cagacggatc ttcccggtct tcgcgtccaa
     2101 gcgtccgacc acgccggcct gctgcgccgt gaaccaggcg ttccccgcct ggtccagcac
     2161 catcgtgtgg ggatcgctca ccttcgggtc gggcatcgga tagttggtga gcttccgcgt
     2221 cttcgggtcc agcttcacca gccgcccgtt gcggttgccg gtgaaccaca ccatgccgtc
     2281 gggggccacg accaggttgt gcgggtgggt gcccgcctcg atctc
//
LOCUS       DASUYN010000561         2598 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_618350, whole genome shotgun sequence.
ACCESSION   DASUYN010000561 DASUYN010000000
VERSION     DASUYN010000561.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2598)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2598)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2598
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_618350"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(258..695)
                     /locus_tag="VF061_10985"
     CDS             complement(258..695)
                     /locus_tag="VF061_10985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HEX6670077.1"
                     /translation="MVRYAWPGWWLGLLVGIGSPAAAQANLPPPRVELKENYPNPFFP
                     ATTIPFTISSEVCTRGHQPVVSLKIYNVLVQMVAIPVLADGSAERLDSLRLRCGEYRA
                     HWDGRYLDGKGEATAGIYYYQLTVDGERYTRKMIAQARRTNQP"
     gene            complement(798..>2598)
                     /gene="selB"
                     /locus_tag="VF061_10990"
     CDS             complement(798..>2598)
                     /gene="selB"
                     /locus_tag="VF061_10990"
                     /inference="COORDINATES: protein motif:HMM:TIGR00475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0001514 - selenocysteine incorporation
                     [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="selenocysteine-specific translation elongation
                     factor"
                     /protein_id="HEX6670078.1"
                     /translation="EALTGRRMDRLAEERRRGITIDLNFAPLELGGGTVAGVVDVPGH
                     EDFVRTMVAGASGVDLALLVVAADEGIMPQTLEHLTVLEHLGVPRGIPVLTKIDLVDR
                     DWLDLVATELGERLARSRVAFDPPLPVSARTGEGIEDLRRLIASHAHGVAPRAPGDLF
                     RMPVDRSFSLAGIGTVVTGTAWSGRLRIGDEVAVLPPGTTARVRSIQAHGRAMERSEP
                     GRRTAVGLAGIAREDAARGTVLVAAGDGWAPATALDVELELESFSPRPLGPRARVRVL
                     HGTGETLARVLPRAAIAPGSRGLARLALERPIVARGRDRFVLRSYSPVETIGGGIILD
                     PLPPLRRARWPLDLQAEDPARRCSALVERRPAGVATRMLPVLLGVPPAEARAAATSAP
                     ELRRVGELWVTAASLDQAGTRCLELLRRHHRDKPLERGMPLETLRRSVRAPAPVVESV
                     LDELVRGGRMRRLEGWVALAGFTPRAAGGEGAVAEILTLLEEAGLTPPSIAELERRTG
                     RRDVEGILRLAAAAGKVEAVERDRYYARAVLDRFVAVLRDEGGGDVIVPSELRQRLGI
                     SRKYLIPLLEWADSRGVTEWEGDVRRVRSSRHA"
BASE COUNT          392 a          956 c          876 g          374 t
ORIGIN      
        1 tcaggctgct gcagcagtgc caggagcagg tgagcatcgt tcacgactgg gttgcccagg
       61 cgacgtgcct cagcgtcggc gtcgcggaac gcctcctgag ccttgattgt catccgatcc
      121 ggtcggatca ttgcaacctc atttctattc gggggttacg atcacactgc tcaggcatcg
      181 gcaagtgccg ttccccgaat aactgccgca atggcagtca ggctcggaaa acacataggg
      241 gcgaccagcc gtcgccccta tggttgattc gtgcgtcgtg cctgcgcgat catcttccgg
      301 gtataccgtt ccccgtcgac cgtgagctgg tagtagtaga tcccggccgt cgcctcgccc
      361 ttcccatcga gatacctgcc gtcccagtgg gcccggtact caccgcaccg gagtcgaagg
      421 ctgtcgagcc gctcggccga gccgtcggcc agcaccggga tggcgaccat ctggaccagc
      481 acgttgtaga tcttcaggct gaccaccggc tgatgacccc tggtacacac ttcactcgag
      541 atcgtgaagg ggatcgtcgt cgccgggaaa aagggattgg ggtagttctc cttcagctcg
      601 acccgtggag ggggaaggtt cgcctgtgcc gcagcgggag agccgatgcc caccagaagc
      661 ccgagccacc accccggcca cgcgtagcgg accatgggcg ctcctcttca tacttggtgt
      721 gaaacggtgg gcacctccga gatggcgtac ggagttgacg cagtcgctcg caagatggcg
      781 gagcgccggt ttgggtgtca agcgtggcgc gagctccgca cccgccggac atcgccttcc
      841 cactccgtaa ctccccgtga atcagcccat tcgagtagcg ggatcaagta ctttctgctg
      901 atgccgagcc gctggcggag ctcggagggt acgatcacat cgccgccacc ctcatcccga
      961 agcaccgcca cgaaccggtc gaggaccgcc ctggcgtagt aacggtcgcg ctccaccgcc
     1021 tcgaccttgc ccgccgcggc cgcgagccgc aggatgcctt ccacgtcgcg ccgtccggtg
     1081 cgccgctcca gctcggctat gctgggcggg gtgagcccgg cctcctccag gagcgtgaga
     1141 atctcggcga cggccccctc gccacccgct gcccgggggg tgaagccggc gagcgccacc
     1201 cacccctcca gccggcgcat ccgacccccg cggaccagct cgtccaggac ggactccacg
     1261 accggcgcgg gtgcccgcac cgatcggcgc agggtctcca ggggcatgcc ccgctccagc
     1321 ggcttgtccc ggtggtgccg gcgcagcagc tcgaggcacc gggtaccggc ctggtccagt
     1381 gacgccgcgg tgacccagag ctcaccgact cggcgaagct cgggggcgct cgtcgcggcc
     1441 gctctcgcct ctgcgggagg cactcccagc agcaccggga gcatcctcgt cgcgaccccg
     1501 gccggcctcc gctcgaccag ggccgaacac cgccgggccg gatcctccgc ctggaggtcc
     1561 aggggccatc gcgcccggcg gagcggtggc aggggatcga ggatgatccc gccgccgatc
     1621 gtctccaccg ggctgtagct ccgaagcacg aaccggtcac gaccacgggc gacgatcggg
     1681 cgctcgagcg ccaggcgggc gagcccgcgg ctgccgggcg cgatcgcggc cctcggcagc
     1741 acccgggcga gcgtttctcc cgtgccgtgc agcacgcgca cccgagcccg agggccgagc
     1801 ggacgggggc tgaaggattc cagctccagc tcgacatcga gggccgtggc gggagcccag
     1861 ccgtcgcccg ccgcgacgag cacggtgcca cgggccgcgt cttcccgcgc gatcccggcg
     1921 aggccgacgg cggtgcgccg ccccggctcg ctccgctcca tcgcccggcc gtgtgcctga
     1981 atcgaccgta cccgtgccgt cgtgcctggg ggcagcaccg cgacctcgtc tccgatccgg
     2041 agccgtcccg accatgcggt gccggtgacc acggtaccga tgccggcgag cgagaacgag
     2101 cggtccaccg gcatccggaa gaggtcgccg ggcgcgcggg gcgcgacgcc gtgggcgtgg
     2161 gacgcgatga gccgccggag gtcctcgatg ccctcgccgg tccgtgccga cacgggcagc
     2221 ggcgggtcga aggcgacgcg agagcgggcc agtcgctcgc ccagctcggt cgcgacgagg
     2281 tcgagccagt cccggtccac caggtcgatc ttggtcagca ccggaatccc acgcggcacg
     2341 ccgaggtgct cgagcacggt gaggtgctcc agcgtctgcg gcatgatgcc ctcgtcggcc
     2401 gccaccacga ggagcgccag atccacgccc gacgcgcccg ccaccatggt gcgcacgaag
     2461 tcctcgtgac ccggcacgtc cactacccct gccaccgtgc cgccaccgag ctccagcggg
     2521 gcgaagttga ggtcgatggt gatgccccgc cgccgctcct cggcgagacg gtccatcctc
     2581 cggcccgtca gggcttcc
//
LOCUS       DASUYN010000562         2543 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1502371, whole genome shotgun sequence.
ACCESSION   DASUYN010000562 DASUYN010000000
VERSION     DASUYN010000562.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2543)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2543)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2543
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1502371"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1401
                     /locus_tag="VF061_10995"
     CDS             <1..1401
                     /locus_tag="VF061_10995"
                     /inference="COORDINATES: protein motif:HMM:NF012562.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HEX6670079.1"
                     /translation="DSVMKLAYGRMLQDGLDGRHGLPRARLGELAEGFGSVHGEVRRR
                     RGAGEYGFYDLVDQGTTVRQITAFAEGVGQAYDHVLVLGIGGSALGTKALLNALRRPA
                     WNEWDDEGREFYPRVTVLENVDPTTVAAALARIDPRRVLVNVISKSGGTAETMAQYLV
                     VRAWLHSALGEAAARHLVFTTDPARGALRELAQRDGIATLDVPPAVGGRFSVLSPVGL
                     LPAALAGIDIAALLAGARRAVERADADDLLRNPAALYAALHWLADSELGARIHVLMPY
                     TDRLRELAEWFRQLWAESLGKRVDREGRIVHVGPTPLAAVGATDQHSQVQLFMEGPFD
                     KVITFIRLERFAEEVVIPGPDGTGGPDLPADLAYLPGHSLGELLNAEYEATAAALAEM
                     GRMSCTLRLPELTAESLGEVIMFFQLATGYAGVWYGIDPFDQPGVELGKRLTYAAMGR
                     PGYQSATRADPPPDEV"
     gene            1484..>2543
                     /locus_tag="VF061_11000"
     CDS             1484..>2543
                     /locus_tag="VF061_11000"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016832 - aldehyde-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HEX6670080.1"
                     /translation="MPDVTQQVIDLYGGAVVPAAKGVTVRDPAKLRSPATDQVVWQAV
                     FGKDDEREAARWLLWELGQATGARPASINGLYLARGRGEVGGFTVPAMNVRIMAYDTA
                     RAIFRTARSGKAGAIILEIARSEIAYTEQRPAEYVSVIIGAALREGFTLPLFIQGDHC
                     QVNHKKYQADPEGEVGEVKKLIAEEIGAGFYNVDVDTSTLVDLSHATLEEQQRANYER
                     AAEITAFIRSQEPEGVTVSVGAEIGEVGMKNSTVEELHAFMQGYNRSLAALGKLEGIS
                     KISVQTGTSHGGVVLPDGSIADVKLDLQALEALSRVAREEYGLAGAVQHGASTLPSNA
                     FGNFPRIETAEIHLATNFQ"
BASE COUNT          386 a          866 c          934 g          357 t
ORIGIN      
        1 gattccgtga tgaagctggc gtatggacgg atgctgcagg acggactgga cggccggcac
       61 gggctgcccc gtgcgcggct cggggagctc gccgagggct tcggctcggt gcatggcgag
      121 gtccgccggc ggcggggcgc gggggagtac ggcttctacg acctggtgga ccagggcacc
      181 accgtccggc agatcaccgc gttcgccgag ggcgtgggcc aggcctacga ccacgtgctg
      241 gtgctcggca tcggggggtc ggcgctgggg accaaggcgc tgctcaatgc cctccgccgg
      301 ccggcctgga acgagtggga cgacgagggc cgggagttct acccccgggt caccgtgctg
      361 gagaacgtgg acccgaccac ggtggcggcc gcgctggccc ggatcgaccc ccggcgggtg
      421 ctggtcaacg tgatcagcaa gtcggggggg accgcggaga ccatggccca gtacctggta
      481 gtgcgcgcct ggctgcactc cgccctcggg gaggcggccg cgcggcatct cgtcttcacc
      541 accgatccgg cccgaggcgc gctccgggag cttgcccagc gggacgggat cgcgaccctc
      601 gatgtgccgc cggccgtcgg cggccgcttc agcgtgctct cgccggtcgg cctcctgccc
      661 gccgcgctgg cgggcatcga catcgcggcc ctcctcgccg gcgctcggcg cgccgtcgag
      721 cgcgccgacg cggacgatct gctgcgcaat ccggccgcac tctacgccgc gctccactgg
      781 ttggccgaca gcgagctcgg cgcgcgcatt cacgtcctca tgccgtacac cgaccggctg
      841 cgcgagctcg ccgagtggtt ccggcagctg tgggccgaga gtctgggcaa gcgggtggat
      901 cgggagggac gcatcgtgca cgtcggcccc accccgctcg ccgcggtcgg ggctaccgac
      961 cagcacagtc aggtgcagct cttcatggag ggcccgttcg acaaggtgat caccttcatc
     1021 cggctggagc gcttcgcgga agaggtggtg ataccgggtc ccgatggcac cggtggcccc
     1081 gatctccccg ccgacctggc ctacctgccg gggcacagtc tgggcgagct gctcaacgcg
     1141 gagtacgagg cgaccgcggc ggccctcgcc gagatgggac ggatgagctg caccctgcgg
     1201 ctgccggagc tcacggcgga gtcgctgggc gaggtgatca tgttcttcca gctggccacg
     1261 gggtacgcgg gggtgtggta cggcatcgac ccgttcgatc agcccggggt ggagctcggc
     1321 aagcggttga cctacgcggc gatgggccgc ccgggctacc agtccgccac ccgcgccgac
     1381 cctccgcctg acgaggtgtg agccgtttga cggtccccag cgggcggcct agcttagggc
     1441 gggtgacagg acggagtgag ccgtcaacca aggaacgcac tgcatgcccg atgtgacgca
     1501 gcaggtgatc gatctctacg gtggcgcggt cgtgcccgcg gccaaagggg tgaccgtccg
     1561 ggacccggcc aagcttcgct cgcccgcgac cgaccaggtg gtgtggcagg cggtgttcgg
     1621 caaggacgac gagcgcgagg ccgcccgctg gctgctctgg gagctgggcc aggccaccgg
     1681 cgcccgtccc gcctccatca acgggctgta cctggcgcgc ggcaggggcg aggtgggcgg
     1741 cttcaccgtg cccgcgatga acgtgcgcat catggcgtac gataccgccc gcgccatctt
     1801 ccggaccgcc cggagcggaa aggccggagc catcatcctg gagatcgccc gctcggagat
     1861 cgcctacacc gagcagcggc ccgcggagta cgtctccgtg atcatcgggg ccgcgctcag
     1921 ggaaggcttc acgctaccgc tcttcatcca gggcgaccac tgccaggtga accacaagaa
     1981 gtaccaggcc gaccccgagg gggaagtggg cgaggtcaag aagctgatcg ccgaggagat
     2041 cggggcgggc ttctacaacg tggacgtgga cacctccacg ctggtggatc tgtcgcatgc
     2101 caccctggag gagcagcagc gcgcgaacta tgagcgggcc gcggagatca ccgccttcat
     2161 ccggtcccag gagccggagg gcgtgaccgt gtcggtcggc gccgagatcg gcgaggtcgg
     2221 tatgaagaac agcaccgtcg aggagctgca cgccttcatg cagggctaca accgcagcct
     2281 ggcggcgctg ggcaagctgg aggggatcag caagatctcg gttcagaccg gaacctccca
     2341 cggcggggtg gtgctgcccg acggatccat cgccgacgtg aagctcgatc tccaggcgct
     2401 cgaggcgctc agccgggtcg cgcgggagga gtacgggctg gccggcgcgg tgcagcacgg
     2461 cgccagcacg ctcccctcga acgccttcgg caacttcccc cggatcgaga ccgccgagat
     2521 ccacctcgcc accaacttcc aga
//
LOCUS       DASUYN010000563         2290 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1722069, whole genome shotgun sequence.
ACCESSION   DASUYN010000563 DASUYN010000000
VERSION     DASUYN010000563.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2290)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2290)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2290
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1722069"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..476
                     /locus_tag="VF061_11005"
     CDS             <1..476
                     /locus_tag="VF061_11005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX6670081.1"
                     /translation="VAENIRLGLAKRLRDEGEIRARIEESLAVVELVGVEDKYPAELS
                     GGMRKRVGIARAIALKPRYILYDEPTTGLDPVTSAVMDQLMIRTRDLGVTGLVVTHDM
                     RSAFSVGDRIAMLYEGAIRQVGTVAEIQATDDPVVRQFIEGRPGSPAPAPAWRYE"
     gene            473..1480
                     /locus_tag="VF061_11010"
     CDS             473..1480
                     /locus_tag="VF061_11010"
                     /inference="COORDINATES: protein motif:HMM:NF014523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HEX6670082.1"
                     /translation="MKRSNEFAVGLAVLAALALVIGGALWLSETDVNQKEATYTARFR
                     TVGGLGVGAPVTLRGVRVGRVQAIRLAPDEWVETELTIDRSVELPGKPAVISAPASLF
                     GEWGANIVSFEPLPTDPLVRSALQESDLAGGAAWPGATLPDIGQLTAQASRIAGDVGD
                     ITARIGQAFDSTALLHLQQSVKDLAEISRRMVRFADAQTTRIDRVSRNVATTSDAFAG
                     VARTFQMAVARLDTATADGQLEDILANGQASSADLRQAAADMRSVMSAARDNEASLVR
                     VMQQADSLMTRIQQGNGTLGLLATDSTLYREATATVVQFRELLTDIKAQPRKYLKISV
                     F"
     gene            1481..1957
                     /locus_tag="VF061_11015"
     CDS             1481..1957
                     /locus_tag="VF061_11015"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEX6670083.1"
                     /translation="MSKRKADLEVSAGGIVFRRPPDSGPRFLLIKDSYDNWGFPKGHL
                     ENGESPAEAALRETAEETGLDRLVLQGPIRVIDWHFRFRGRHIHKYCHFFLFESPEGE
                     PCPQLDEGITACQWRTLEEALDVLSYDNARGVLKRAGEMVRTLVAIGAGRPARRTD"
     gene            1961..>2290
                     /locus_tag="VF061_11020"
     CDS             1961..>2290
                     /locus_tag="VF061_11020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670084.1"
                     /translation="MAAIAALLESRTALAALRRTLPRGGPRLVTCRSAANLRRVLESR
                     LVDAVVLAPTPATLAELAELRARLPGIPVVAYAAFRPDDGELLLACRKHAVPVAVEGV
                     DDAVVGEM"
BASE COUNT          342 a          811 c          818 g          319 t
ORIGIN      
        1 cggtggccga gaacatccgg ctcggcctcg cgaagcggct gcgcgacgag ggcgagatcc
       61 gggcccggat cgaggagagc ctcgcggtcg tggagctggt cggcgtcgag gacaagtacc
      121 cggccgagct gagcggcggg atgcgcaagc gggtggggat cgcccgcgcg atcgccctca
      181 agccgcgcta cattctctat gacgagccca ccaccgggct cgaccccgtc acctcggccg
      241 tcatggacca gctcatgatc cgcacccgcg atctgggggt cacggggctg gtcgtcaccc
      301 acgacatgcg cagtgccttc agtgtcggcg accggatcgc catgctgtac gagggggcga
      361 tccgccaggt cggcaccgtc gccgagatcc aggcgaccga cgatcccgtg gtgcgccagt
      421 tcatcgaggg ccgtcccgga tcccccgctc cggcgccggc gtggaggtac gaatgaagcg
      481 aagcaacgaa ttcgccgtgg gcctcgcggt gctcgccgcc ctggcgctcg tgatcggcgg
      541 cgcgctctgg ttgagcgaga ccgacgtgaa ccagaaggaa gccacctata cggcgcgctt
      601 ccggacggtc ggcgggctcg gggtcggcgc gccggtgacg cttcggggcg tgcgcgtggg
      661 ccgggtgcag gccattcggc tcgccccgga cgagtgggtg gagaccgagc tcaccatcga
      721 ccgctcggtc gagctgcccg gcaagcccgc cgtgatctcc gcgcccgcca gcctcttcgg
      781 ggagtgggga gcgaacatcg tctccttcga gcccctcccc accgacccgc tggtgcggag
      841 cgcgctccag gaatccgacc tggccggggg ggccgcctgg cccggagcga cgctgcccga
      901 catcggccag ctcaccgccc aggccagccg catcgccggt gacgtcggcg acatcacggc
      961 ccggatcggc caggcgttcg acagcaccgc cctcctgcac ctccaacaga gcgtgaagga
     1021 cctcgccgag atctcccggc gcatggtgcg cttcgccgac gcccagacca cccggatcga
     1081 ccgcgtgagc cggaacgtgg cgaccacgtc ggacgccttc gccggcgtcg cccgcacctt
     1141 ccagatggcg gtggcccggc tcgacaccgc gactgcggac ggacagctcg aggacatcct
     1201 cgccaatggc caggcctcga gcgccgacct gcggcaggcc gcggccgaca tgcggtcggt
     1261 gatgtccgcg gcccgagata acgaggccag cctcgtccgg gtgatgcagc aggccgactc
     1321 gctcatgacc cggattcagc aggggaacgg cacactgggc ctcctggcga cggattccac
     1381 gctgtaccgg gaggccactg cgaccgtggt ccagttccgc gagctgctca ccgacatcaa
     1441 ggcgcagccc cgcaagtacc tcaagatctc ggtgttctag atgagcaagc ggaaggccga
     1501 cttggaggtg agcgcgggcg gcatcgtgtt ccgccggccc cccgactcgg ggccgcgctt
     1561 cctcctgatc aaggattcgt acgacaactg gggattcccc aaggggcacc tggagaacgg
     1621 cgagtccccc gccgaggcgg cgctccggga gacggcggag gagaccggac tcgaccgcct
     1681 ggtgctgcag ggcccgatcc gggtcatcga ctggcatttc cgctttcgcg ggcgccacat
     1741 ccacaagtac tgccacttct tcctgttcga gagcccggag ggcgagccct gcccccagtt
     1801 ggacgagggg atcacggcct gccaatggcg gacgctggag gaggcgctcg acgtgctgag
     1861 ctacgacaac gctcgcggcg tgctcaagcg cgccggggag atggtccgca ccctcgtggc
     1921 gatcggtgcg ggaaggccgg cgcggcggac ggactgagcc gtggcggcga tcgccgcact
     1981 cctggagagt cgtaccgcgc tggcggccct ccgtcgcacc ctcccgcgcg gcgggccccg
     2041 cctggtcacc tgccgcagcg ccgccaacct gcgaagggtc ctggagagcc ggctggtgga
     2101 cgcggtggtg ctggcgccga ctcccgcgac cctggccgag ctggccgagc tgcgggcccg
     2161 actgcccggc attccggtcg tcgcctatgc cgcgtttcgt cccgatgacg gcgagctgct
     2221 gctcgcctgc cgaaagcacg cggtgcccgt ggccgtcgag ggtgtggacg atgcggtggt
     2281 gggcgagatg
//
LOCUS       DASUYN010000564         4328 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_179527, whole genome shotgun sequence.
ACCESSION   DASUYN010000564 DASUYN010000000
VERSION     DASUYN010000564.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4328)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4328)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4328
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_179527"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..629
                     /locus_tag="VF061_11025"
     CDS             <1..629
                     /locus_tag="VF061_11025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670085.1"
                     /translation="VGAFFGWESVWPVLALGAFIGIVVYVAAALRRESPAAPAAAGEA
                     VAAVPPAPALRWGRLLTLIAGGLVLGALVGLAARLGVIGGVLRGIFHAVLGAGAAYYL
                     SFVLPKRVLQGPRAQVWGLLGAGAGIAIGSGDWRGLVAGIAIGTAAWWWAARHTVTAS
                     PESTEELSAHGYLPFGIGLSIAAILLGFTGGFERVREMFAEIAPGLGL"
     gene            626..1828
                     /locus_tag="VF061_11030"
     CDS             626..1828
                     /locus_tag="VF061_11030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670086.1"
                     /translation="MRAATAVLLTGALTLGACRGEARQTQARHEQDLARLVDSLRGPV
                     EQATGLRFTSPPRSAMRSRDQVRAYLIGKLDEELPPKRLHGLETTYRLFGLLPDTLQL
                     RPLLVDLYTEQVAGFYDPDSATLFGVEGADRTQLRLVLAHELIHALQGQHLPLDSILD
                     ARENNDRLSAAQAILEGQATLASLEVLAPGQDVAQNPQFWELYREQVRQQQSSMPVFR
                     RAPLVLRETLIFPYLQGAEFMHWWESQGRDSMPYGARMPVSTEQVLHPDRYGRGDAPV
                     PIAFPTEPGVVYEDVLGESEIRVILATLAGSDEVQTVVPIGWGGDRYRLYEPGDGPAL
                     IWYVVWDDTRSAERFLRSAAGLRRTARPGYRAALESLTVGGRPVTRYVLAPVAWDRWE
                     SLPEVTLP"
     gene            complement(1894..3468)
                     /locus_tag="VF061_11035"
     CDS             complement(1894..3468)
                     /locus_tag="VF061_11035"
                     /inference="COORDINATES: protein motif:HMM:NF016196.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF445 family protein"
                     /protein_id="HEX6670087.1"
                     /translation="MERDLVIQGLVTVAVGAVSGGITNAVAIWMLFHPYESRGLGPFR
                     IQGAIPKNKARLARSIGRTVGERLLTPQDLAERLSAPAVRAAFDQAVARFLDDLLERE
                     RGPFREQLSPELVGALDGAIAGLAPRAADRVAAFAGTPEFEGMVAGWVSRLAADIGDR
                     PISDALTGSRREALKGRIQVWVERLAEGDELERTLRSFVDRRLEALARDHQPLLDRLP
                     PGVVGALEHAITDYLPIALERLSAVLGDPEARGRVEAALRSAFDHSVRDLLLHERILA
                     RIMVTDRTIERLVDGFEAEGFDRFAESLTEPEMKAQVTRAVNDAVVNFLRLSPAERLR
                     RFTPERKQALADNLADWLVRVARDPATREAVARAVDRLLQAAEGRTWGDVLGVVPPDR
                     LARFAGEALAGDAGRRRVEESVAQVATALLARPIGRPSAWLGADTTGALREAISATAW
                     TWLQEQIPRAVEQIRVPEMVEQKVLGFSTQRMEEIVRTVTQRELDLIVRLGYLLGGLV
                     GVIAFLVNVLMRGMSP"
     gene            complement(3468..>4328)
                     /locus_tag="VF061_11040"
     CDS             complement(3468..>4328)
                     /locus_tag="VF061_11040"
                     /inference="COORDINATES: protein motif:HMM:NF016196.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF445 domain-containing protein"
                     /protein_id="HEX6670088.1"
                     /translation="LARHAASALRSATEVVKDDDVHALLERSVIEPLRQRSIAPVLAK
                     GLVLLTANDRHQQLLDRVINGLAGLIMENEGFIRARIHEESPWWVPGFVDERVHARVV
                     AGIQRTLLEVATEPSHPLRRQFDDLLTDWIVRLQESPEAIARADAVKQQLFDHPTSKR
                     LSASLWTEVKRALDHQAAPVSGEAPGAMERGLVALADGALEDPGLLAKLDGWIVEAVL
                     SVVEQHRHEVGGLIEHTVRSWDPGETSRRLELAVGRDLQFVRINGTLVGGLVGLILYT
                     VSRLAGYGSH"
BASE COUNT          572 a         1544 c         1594 g          618 t
ORIGIN      
        1 tggtcggcgc gttcttcggc tgggaatcgg tgtggccggt cctcgcgctc ggcgcgttca
       61 tcgggatcgt ggtctacgtg gcggcggcgt tgaggcggga atcccccgcg gcaccggccg
      121 cggcaggcga ggccgtcgcg gcggtgccgc cggctccggc gctccgatgg ggaaggctgt
      181 tgaccttgat cgcaggaggc ctggtgctgg gcgcgctcgt gggcctcgcg gcgcggctgg
      241 gggtgatcgg tggcgtgctg cgcggcatct ttcacgccgt gctcggcgcc ggtgcggcgt
      301 actacctctc gttcgtgctg ccgaagcgag tgctgcaagg gccgcgcgcg caggtgtggg
      361 gcctgctcgg cgccggggca gggatcgcga tcggcagcgg cgactggagg ggactcgtgg
      421 cgggcatcgc gatcgggacc gccgcgtggt ggtgggccgc gcggcacacg gtgacggcct
      481 caccggaaag caccgaggag ctcagcgcgc acggctatct cccgttcggc atcggcctca
      541 gcatcgcggc gatcctgctc ggcttcaccg gcgggttcga gcgggtgcgc gagatgttcg
      601 ccgagatcgc cccggggctg gggctgtgag agcggcgacc gccgtcctct tgaccggtgc
      661 gctgacactg ggcgcctgcc ggggcgaggc gcgtcagacg caggcgagac acgagcagga
      721 tctggcgcgg ctggtggaca gtctgcgggg gccggtcgag caggccaccg gtctgcggtt
      781 cacctcgccg ccgcgctccg cgatgcggag ccgggaccag gtgcgcgcct acctgatcgg
      841 caagctggac gaggagctgc cgccgaagcg gctgcacggg ctggaaacca cgtatcgcct
      901 cttcggcctg cttccggaca cgctgcagct ccggccgctg ctcgtcgacc tctataccga
      961 gcaggtggcc gggttctacg accccgactc cgccacgctg ttcggggtgg agggcgcgga
     1021 ccgcacccag ctccggctgg tgctggcgca cgagctcatc cacgcgcttc aggggcagca
     1081 tctcccgctc gactccattc tcgacgcccg cgagaacaac gaccgcctgt ccgccgcgca
     1141 ggcgatcctc gagggccagg ccaccctggc ctcgctggag gtgctcgcgc cgggccagga
     1201 cgtggcgcag aatccccagt tctgggagct gtaccgcgag caggtgcggc agcagcagtc
     1261 gtccatgccc gtctttcggc gcgcgccgct ggtgctgcgg gagacgctga tcttccccta
     1321 cctccagggc gccgagttca tgcactggtg ggagagccag gggcgggact cgatgccgta
     1381 cggcgcgcgg atgccggtct cgaccgagca ggtgctgcat cccgaccgct atggccgcgg
     1441 cgacgccccg gtcccgatcg ccttcccgac ggagccgggt gtggtatacg aggacgtgct
     1501 gggtgagagc gagatccggg tcatccttgc caccctggcg gggtccgacg aggtgcagac
     1561 ggtggtgccg atcggatggg gtggcgaccg ctaccggctc tacgagccgg gcgacggccc
     1621 ggcgctgatc tggtacgtgg tgtgggacga cacgcgctcg gccgagcggt ttcttcggag
     1681 cgcggcgggg ctgcggagga cggcacggcc cggctatcgg gcggcgctgg aatcactcac
     1741 cgtcggcggc cggcctgtga cgcgctacgt gctggcgccc gtggcgtggg accgctggga
     1801 gtcgctgccg gaggtcacac tgccgtagga gcgcgccttg tcaccctgag cgaagcgaag
     1861 ggggccatgc cggtattgcc cccttcacgt ggttcagggt gacatgcccc gcatcagcac
     1921 gttcaccagg aaggcgatca cccccaccag cccgcccagc aggtacccca gccgcacgat
     1981 caggtccagc tcccgctggg tcaccgttcg gacgatctct tccatccgct gggtcgagaa
     2041 gccgagcacc ttctgctcca ccatctcggg cacccggatc tgttctaccg cgcgggggat
     2101 ctgttcctgg agccaggtcc acgcggtggc cgagatcgct tcgcggagcg cgcccgtcgt
     2161 gtcggcgccg agccaggcgg acggacggcc gatcggcctg gcgaggagcg cggtggcgac
     2221 ctgggcgacg ctctcctcga cccggcgcct gcccgcgtcc cccgccagcg cctcgccggc
     2281 gaagcgggcc agccggtcgg gcgggaccac tcccaggacg tcgccccagg tgcgcccctc
     2341 ggccgcctgg agcagtcggt ccacggcccg ggcgacggcc tcgcgggtcg cggggtcccg
     2401 cgcgacccgc accagccaat ccgccaggtt gtcggccagg gcctgcttcc gctccggggt
     2461 gaagcggcgg agccgctccg cgggcgacag gcggaggaag ttcaccaccg cgtcgttcac
     2521 cgcgcgcgtc acctgggctt tcatctccgg ctcggtcagc gactccgcga accggtcgaa
     2581 gccctcggcc tcgaagccgt ccaccagccg ctcgatggtg cggtcggtca ccatgatccg
     2641 cgcgaggatc cgctcgtgca ggagcagatc gcggacggag tggtcgaacg ccgaccggag
     2701 cgcggcctcg accctgccgc gggcctccgg atcgccgagc acggcgctga gccgctcgag
     2761 cgcgatcggg agatagtcgg tgatggcgtg ctccagcgcg ccgaccacgc ccggcgggag
     2821 ccggtcgagc aggggctggt ggtcgcgcgc gagcgcctcc aggcggcgat ccacgaacga
     2881 ccgcagcgtg cgctccagct cgtcgccctc ggcgaggcgc tccacccaga cctggatcct
     2941 gcccttgagc gcctcgcgcc ggctgccggt gagggcatcg gagatcggcc ggtctccgat
     3001 gtcggccgcg aggcgcgaga cccagcccgc caccatcccc tcgaactccg gagtgcccgc
     3061 gaaggccgcc acccgatccg cggcgcgcgg cgcgagcccg gcgatcgcac cgtcgagcgc
     3121 gcccaccagc tcgggagaga gctgctcccg gaaggggccg cgctcgcgct cgagcaggtc
     3181 gtccaggaac cgggccaccg cctggtcgaa cgcggcgcgg accgccggcg cgctgagacg
     3241 ctcggccagg tcctgcgggg tcaggagccg ttcccccacg gtgcggccga tgctccgggc
     3301 gagccgggcc ttgttcttgg gaatggcgcc ctggatccgg aaggggccga gcccgcggga
     3361 ctcgtaggga tgaaacaaca tccagatggc gaccgcgttg gtgatgccgc cggagacggc
     3421 accgaccgcg accgtcacca gcccctggat caccaggtcg cgttccatca gtgcgagccg
     3481 tacccggcga gtcgggacac ggtgtacagg atgagcccga ccagtccgcc gaccagggtc
     3541 ccgttgatcc gcacgaactg gagatcgcgg ccgacggcga gctcgagccg gcgcgaggtc
     3601 tcgcccggat cccagctgcg cacggtgtgc tcgatgagcc cgcccacctc gtggcggtgc
     3661 tgctccacca cgctgagcac cgcctccacg atccagccgt ccagcttggc gaggagcccc
     3721 gggtcctcca gcgccccgtc ggcgagcgcg accagccccc gctccatcgc gccgggagcc
     3781 tccccgctca ccggcgccgc ctggtggtcg agcgcgcgct tgacctcggt ccagagcgag
     3841 gcgctcagac gcttgctggt ggggtgatcg aagagctgct gcttcaccgc gtcggcccgc
     3901 gcgatggcct cgggcgactc ctgcagccgc acgatccagt cggtgagcag gtcgtcgaac
     3961 tgccgccgca gcggatgcga gggctcggtg gcgacttcga gcagggtgcg ctggatcccg
     4021 gcgaccaccc gcgcgtggac ccgctcgtcc acgaagcccg gtacccacca cgggctctcc
     4081 tcgtggatcc gggcgcgaat gaagccctcg ttctccatga tgagcccggc gaggccgttg
     4141 atcacgcggt cgagcagctg ctggtgccgg tcgttcgcgg tgaggagcac gagccccttc
     4201 gccagcaccg gggcgatgga gcgctggcgg agcggctcga tcacgctccg ctcgaggagc
     4261 gcatggacgt cgtcgtcctt caccacctcc gtggcgctgc ggagtgccga cgccgcgtgc
     4321 cgggccag
//
LOCUS       DASUYN010000565         2740 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1723840, whole genome shotgun sequence.
ACCESSION   DASUYN010000565 DASUYN010000000
VERSION     DASUYN010000565.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2740
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1723840"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1008)
                     /locus_tag="VF061_11045"
     CDS             complement(<1..1008)
                     /locus_tag="VF061_11045"
                     /inference="COORDINATES: protein motif:HMM:NF012234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX6670089.1"
                     /translation="MADSIRDLFFGTPANELVEAIEPRRTFDDVVLPETTLRQLNHAL
                     ALVRKHDLIFRQWGLAERHSSGLGLAFHFAGPPGTGKTICAEALAYALDQHLLVVRYS
                     ELESRWVGQTAKHVASVFRAAEQQNAVLFFDEADAIAGRRFTSLSAAYEREANAVVNV
                     LLHEVENFDGVVIFATNLAANIDPAFERRIRTHIRFDMPNAEERERIWRVQLHARKTP
                     LADDVDFRELAERYPRSGGDIKNAVLKAAQIATTEPGPDTDKRIHQRHFVQGMEEVLA
                     AENVMSQSLFDVPGPVGQAAGVLEQLAEGQEQLRAELGLLAERLEQLEQAQARLQAGT
                     GT"
     gene            complement(1011..1364)
                     /locus_tag="VF061_11050"
     CDS             complement(1011..1364)
                     /locus_tag="VF061_11050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670090.1"
                     /translation="MTRSPSEDWLAAWDTEDNYWHENFSSRPYAIGADYYERFRPAYR
                     YGFESATHGLGRTWEDAEPDLAAGWDRYEQRGEASSVWEDIKDAVRDAWDRVAGPRDA
                     STTDRAADAQPRIRE"
     gene            complement(1472..1855)
                     /locus_tag="VF061_11055"
     CDS             complement(1472..1855)
                     /locus_tag="VF061_11055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670091.1"
                     /translation="MAKPDKNWLEWTVFAVGLVLVLATLGFLVRESLAGAGGPPDVVA
                     RLGAPRASAGGFMVPVEVANLGKGAAEDVQVTVILDLPAGDPEEAVLDIAFLPRDSRR
                     NGWVTFRSDPGKGSLRLGPIAFEIP"
     gene            complement(1848..>2740)
                     /locus_tag="VF061_11060"
     CDS             complement(1848..>2740)
                     /locus_tag="VF061_11060"
                     /inference="COORDINATES: protein motif:HMM:TIGR02587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TIGR02587 family membrane protein"
                     /protein_id="HEX6670092.1"
                     /translation="RSGHHRSVPTTRKATAGRTVGESFREYGRGVAGGLLFSLPLLYT
                     MEVWQAGFLMPPHRQLVYVLLALVLLLGYNRYAGLHPDTTWTEIAIDSIEEMGIGLLL
                     SAIVLVLIGRITLEQDAGEVIGRIVVEAVTVAIGVSVGTAQLGAEPGENRPGMQDDGE
                     GSPGGQLVLALCGAVLFAANIAPTEEIVLVGIELSGLQLAGLGLATMVLAALILFFSD
                     FRGARRWARAESRLAMIRGTVVTYAVGLVASAGILWLFGRFDGVGPGPIVGQTVALTA
                     ASTLGASAGRLLLQGGNGGG"
BASE COUNT          413 a         1015 c          918 g          394 t
ORIGIN      
        1 ggtccccgtc cccgcctgca atcgggcctg agcctgctcc aactgctcca gccgctccgc
       61 gagcagcccc agctcggccc gaagctgctc ctgaccctcc gccaactgct ccagcacgcc
      121 cgcggcctgc cccaccggtc ccggcacgtc gaacagcgac tgcgacatca cgttctccgc
      181 ggccagcacc tcctccatgc cctggacgaa gtgccgctgg tggatccgct tgtccgtgtc
      241 cggccccggc tcggtggtgg cgatctgggc ggccttgagg accgcgttct tgatgtcccc
      301 tccgctccgg ggatagcgct cggccagctc gcggaagtcc acgtcgtcgg ccagcggggt
      361 cttgcgggca tggagctgga cccgccagat ccgctcccgc tcctccgcgt tcggcatgtc
      421 gaaccggatg tgggtgcgga tccggcgctc gaacgccggg tcgatgttcg ccgcgaggtt
      481 ggtcgcgaag atcaccaccc cgtcgaagtt ctccacctcg tgcagcagca cgttcaccac
      541 cgcgttcgcc tcccgctcgt acgccgcgct cagcgaggtg aaccggcgcc ccgcgatggc
      601 gtccgcctcg tcgaagaaca gcaccgcgtt ctgctgctcc gcggcacgga agacgctggc
      661 cacgtgcttg gccgtctgcc ccacccagcg cgactccagc tccgagtagc gcaccaccag
      721 caggtgctgg tccagcgcgt aggccagcgc ctcggcgcag atcgtcttcc ccgtgccggg
      781 cggccccgcg aagtggaacg cgaggccgag cccgctggag tgccgctccg ccagccccca
      841 ctggcggaag atgagatcgt gcttccggac cagcgccagg gcgtggttga gctggcgcag
      901 cgtggtctcc ggcagcacca cgtcgtcgaa ggtccggcga ggctcgatcg cctcgaccag
      961 ctcgttggcg ggggtaccga agaagaggtc gcggatggag tcggccacgg ctactcgcgg
     1021 atcctgggct gcgcgtccgc cgcgcgatcg gtggtggaag cgtcgcgcgg accggcgacc
     1081 cggtcccagg cgtcccgcac ggcgtccttg atgtcctccc acacgctgga ggcctcgccg
     1141 cgctgctcgt agcggtccca gccggcggcc agatcgggct cggcgtcctc ccaggtgcgg
     1201 ccgaggccgt gggtggcgga ctcgaagccg tagcggtacg ccgggcggaa tcgctcgtag
     1261 tagtcggccc cgatggcgta ggggcggctg ctgaagttct cgtgccagta gttgtcttcg
     1321 gtatcccagg cagccagcca gtcctcggag ggagatctcg tcatggcgac gctcgtgtcg
     1381 aaagatgaag gagtgatgtc agggtcaccc tgaacactaa gcggagtcgt ccctgagccg
     1441 ggtgactggg atcacgcgag gggccctgcc gctagggtat ctcgaaggcg atcggcccca
     1501 ggcgcaggga tcccttcccc ggatcgctcc ggaacgtcac ccacccgttg cgccgggaat
     1561 cccgcggcag gaaggcgatg tcgagcacgg cctcctccgg gtcccctgcc ggcaggtcca
     1621 gaatgacggt cacctggacg tcctccgcgg cccccttccc caggttggcc acctccaccg
     1681 ggaccatgaa ccctccggca gaggctctcg gtgccccgag ccgcgcgacc acgtccggtg
     1741 gcccgccggc accggcaagc gactcccgga ccaggaaccc cagggtcgcg agcaccagca
     1801 ccagcccgac cgcgaagacg gtccattcca gccagttctt gtccggttta gccaccgcca
     1861 ttccctccct ggaggagcag gcgcccggcg gaggcgccca gggtagacgc cgcggtgagg
     1921 gccaccgtct gccccacgat cgggcccgga cccacgccgt cgaagcggcc gaacagccag
     1981 aggatcccgg ccgacgccac caggcccacg gcgtaggtga cgaccgtccc ccggatcatc
     2041 gccagcctgc tctcggcccg ggcccagcgc cgcgcgcccc ggaagtcgct gaagaagagg
     2101 atgagcgccg cgaggaccat ggtcgcgagt ccgagaccgg cgagctgaag cccggacagc
     2161 tcgatcccga ccagcacgat ctcctcggtc ggagcgatgt tggccgcgaa cagcacggcc
     2221 ccgcagagcg ccagcacgag ctggccgccc ggggagccct cgccgtcgtc ctgcattccc
     2281 ggccggttct cacccggctc ggcgccgagc tgcgcggtgc cgaccgagac gccgatggcg
     2341 acggtcaccg cctccaccac gatccgcccg atcacctcgc cggcgtcctg ctcgagtgtg
     2401 atgcggccga tcaggaccag gacgatcgcc gagagcagga gcccgatccc catctcctcg
     2461 atggagtcga tggcgatctc ggtccaggtg gtgtccgggt ggagcccggc gtaccggttg
     2521 taccccagca ggagcaccag cgccagcagc acgtacacca gctgccgatg gggcggcatc
     2581 aggaagccgg cctgccagac ttccatggta tacaggagcg gcagactgaa gagcagcccg
     2641 ccggctacgc cgcgcccgta ctcgcggaac gattcgccga cggtccgccc ggcggtggcc
     2701 ttccgggtcg ttggcacgct acgatgatgg ccggatcggg
//
LOCUS       DASUYN010000566         2416 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1945644, whole genome shotgun sequence.
ACCESSION   DASUYN010000566 DASUYN010000000
VERSION     DASUYN010000566.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2416)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2416)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2416
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1945644"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..208
                     /locus_tag="VF061_11065"
     CDS             <1..208
                     /locus_tag="VF061_11065"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEX6670093.1"
                     /translation="LIESNLVTPVIYGNRMRLNTVALFIGLVFWWYLWGVPGAILAVP
                     MMAAFKITCDHIESLAPIGEFLGK"
     gene            205..708
                     /locus_tag="VF061_11070"
     CDS             205..708
                     /locus_tag="VF061_11070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670094.1"
                     /translation="MTRGGTAKESAARRLTPEVCAAIDTLPLPVDWSRVRLYGSGCGR
                     GAGLLRGVVLRLSRGRAIALGNHVFVPARCEGDLATLAHEVTHCAQYQAWGPWRYYAR
                     GAVAQLRDLAYRVLGVGRSPYAYVPMPGRPFEAYGMEQQAQIVEDALRGSAAARAIIG
                     GETAPAT"
     gene            complement(677..1624)
                     /locus_tag="VF061_11075"
     CDS             complement(677..1624)
                     /locus_tag="VF061_11075"
                     /inference="COORDINATES: protein motif:HMM:NF023568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX6670095.1"
                     /translation="MSAALLALALIAVPDSGWVAGPDGVRLYYEKIGSGSPTIIVPGR
                     LFLSRELAPLGERHTVILYDMRNRGRSSRVEDGGLLTIQKDVEDLEAVRRHFRVDRFV
                     PVGYSYLGLMVVLYAMRHPDRVERLVQLGPVPRQFGTEYPASLAHRDSVPVVGPAIEA
                     RLDSLERSGWAREHPREYCEESRARAVRLVGDPAKAASLANPCDMPNEWPVNLQRHFE
                     HHFAAVQRLEVPKEAVARVTVPVLTIHGTWDRNAPYAAGREWALTLPNARLITVERAA
                     HQVVTDAPEAVLPAIVEFVGGGWPARAEKITSLERFPRR"
     gene            complement(1632..2042)
                     /locus_tag="VF061_11080"
     CDS             complement(1632..2042)
                     /locus_tag="VF061_11080"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX6670096.1"
                     /translation="MSAPPPSLHSVAIFVNDLARAVEFYRDTLRLPVTHEGSFGAELL
                     EGPPHIGVHPAVHADAKKLVGRHTGITLFVSDLLHYCGDLHARGVRFLTEPTQQPWGI
                     MAMIADPEGNILALWEDRTPEGAGEPVSQADGTS"
     gene            complement(2039..>2416)
                     /locus_tag="VF061_11085"
     CDS             complement(2039..>2416)
                     /locus_tag="VF061_11085"
                     /inference="COORDINATES: protein motif:HMM:NF024822.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4112 domain-containing protein"
                     /protein_id="HEX6670097.1"
                     /translation="IGWETIVGLVPGIGDLVGGGFSAWIILQAARIGAPPSLLARMGW
                     NLLVDVVVGAVPLLGDLFDAGFKANLRNLALLERHVQGPVASRRASRRFVAVLAVLLV
                     LLLLGAVALTVLLVQLLLSRPVL"
BASE COUNT          371 a          827 c          891 g          327 t
ORIGIN      
        1 cctcatcgag agcaacctcg tcaccccggt gatctacgga aaccggatgc gcctcaacac
       61 cgtcgccctc ttcatcggac tggtgttctg gtggtacctc tggggcgtgc ccggcgcgat
      121 cctcgcggtg ccgatgatgg cggcgttcaa gatcacgtgc gatcacatcg agtcgttggc
      181 gccgatcggg gagttcctgg ggaagtgaca cgcggcggga cggcgaagga gagcgcggcg
      241 cgcaggctga cgcccgaggt gtgcgcggcg atcgataccc tgcccctgcc ggtggactgg
      301 agccgggtcc ggctctacgg cagcgggtgc ggtcgggggg cgggactgct tcggggcgtg
      361 gtgctgcggc tcagccgcgg ccgggccatc gccctgggca atcacgtgtt cgtgccggcg
      421 cggtgcgagg gcgacctggc gaccctcgcc cacgaggtga cgcactgcgc gcagtaccag
      481 gcgtggggtc cctggcgcta ctacgcccgg ggagcggtgg cacagcttcg ggacctggcc
      541 taccgggtgc tcggcgtggg acgcagtccc tacgcctacg tcccgatgcc cgggcgcccc
      601 ttcgaggcct atgggatgga gcagcaggcg cagatcgtgg aggacgcgct gcgcgggagc
      661 gcggccgcgc gggcgatcat cggcggggaa accgctccag cgacgtgatc ttctccgccc
      721 gggcgggcca cccgccgccc acgaactcga cgatcgcggg gaggacggcc tcgggcgcgt
      781 cggtcacgac ctggtgcgcg gcgcgctcca cggtgatgag gcgcgcgttc ggcagggtca
      841 gcgcccactc ccggcccgcg gcgtagggcg cattgcggtc ccaagtgccg tggatggtga
      901 ggaccggcac ggtcacgcgt gccaccgcct ccttcggcac ctccagccgc tgcaccgccg
      961 cgaaatgatg ctcgaagtgg cgctggaggt tgaccggcca ctcgttgggc atgtcgcagg
     1021 ggttcgccag gctcgccgcc ttcgccggat cgccgaccag gcggaccgcc cgggctcgcg
     1081 actcctcgca gtactccctg gggtgctccc gcgcccatcc cgagcgttcc agcgagtcca
     1141 accgcgcctc gatcgccggg cccaccacgg ggacggagtc gcggtgggcc aggctcgccg
     1201 ggtattcggt gccgaactgg cgcggcaccg gcccgagctg caccagacgc tccacccggt
     1261 ccgggtggcg catggcgtag agcaccacca tgagcccgag gtaggaatag ccgaccggga
     1321 cgaagcggtc cacccgaaag tggcggcgca ccgcctccag atcctcgacg tccttctgga
     1381 tggtgagaag accgccgtcc tccacccgcg acgaccgtcc gcggttccgc atgtcgtaga
     1441 ggatgacggt gtggcgctcg cccaggggag cgagctcgcg ggacaggaag agccggcccg
     1501 gcacgatgat ggtcggagag ccgctgccga tcttctcgta gtagagccgg accccgtcgg
     1561 ggcccgcgac ccatcccgaa tcggggacgg cgatgagcgc cagcgccagg agcgccgcgc
     1621 tcatcgccgc ctcagctggt gccgtcggcc tgactgaccg gctcgccggc gccttccgga
     1681 gtccgatcct cccacagcgc gaggatgttg ccttcgggat cggcgatcat cgccatgatg
     1741 ccccagggct gctgcgtcgg ctcggtcagg aaccgcacgc cgcgggcatg gaggtcgcca
     1801 cagtagtgca gcaggtcgga gacgaagagc gtgatcccgg tgtggcggcc caccagcttc
     1861 ttggcgtcgg cgtggaccgc cggatgcacc ccgatgtggg ggggaccctc cagaagctcg
     1921 gcgccgaagg aaccctcgtg ggtcaccggg agccggaggg tgtcgcgata gaactcgacc
     1981 gcacgggcga ggtcgttcac gaagatggcg acgctgtgga gcgagggagg cggcgcgctc
     2041 ataggaccgg acggctgagg aggagctgca cgagcagcac ggtgagagcg accgcgccga
     2101 gaagcaggag caccagcagg acggcgagca ccgcgacgaa gcggcgactc gcgcggcgcg
     2161 aggccaccgg cccctgcacg tgccgttcca gcagggccag gttacgcagg ttggctttga
     2221 agcccgcgtc gaagaggtcg ccgagcagcg ggaccgcgcc gacgaccacg tcgaccagga
     2281 gattccagcc catccgcgcg agcagcgatg ggggtgcgcc gatcctggcg gcctgaagga
     2341 tgatccaggc ggagaagccg ccgcccacca ggtcgccgat tcccggcacc agtcccacga
     2401 tcgtctccca cccgat
//
LOCUS       DASUYN010000567         2248 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_621198, whole genome shotgun sequence.
ACCESSION   DASUYN010000567 DASUYN010000000
VERSION     DASUYN010000567.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2248)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2248)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2248
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_621198"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..500
                     /locus_tag="VF061_11090"
     CDS             <1..500
                     /locus_tag="VF061_11090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670098.1"
                     /translation="PERAPMVGVWSLSAAEGAGNTPRDVALRLFTNNGRLERAAEVSG
                     LDLRKVQSEVRSLPNENDASAPPIGVRRTIRLRKTLLTWEGRRVDDSTKSNGQITTVW
                     RADSKRRGPMTARLALTPEWTKGMAGSLRVEGEDDFAEAVKASPVRFVGPAIIGGGGE
                     LAFGR"
     gene            787..>2248
                     /locus_tag="VF061_11095"
     CDS             787..>2248
                     /locus_tag="VF061_11095"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEX6670099.1"
                     /translation="MPAEALREGGVLRGRRVLTLVAGLEGDAIWWLRGRIQAVGPAAR
                     IDRVAPRHLPRFDLPDALITPGFVDGHTHFAMWALGRRRVALTGARTRAEAVARVAAG
                     APSQGWVLGHGWDANDWTERPDRHALDRVHASPVYLDSVDVHAAWVNSAALAVARITT
                     ETPDPPGGRIVRDAAGEPTGVLLERAVELVARVAPRPSTEILDEALLEAQGEAHRLGI
                     TGIHDVEDESAWGAFRRLERTGDLRLRVLFHPPVASLPDLVRRGQRSGTGSRLLGMGG
                     VKLFLDGSLGSRTAWMLEPYEGSRDRGMPVAGERDAAEAVRLAASNGIAVTAHAIGDA
                     AVRRALDLMETLPRAAVPHRIEHFQCVHPADLERAARACIVASMQPAHLLTDIPLVER
                     HWGRRGGGAYAFRSLLRHGTALVFGSDVPVASLDPREGVFAAMERRAADGTPRDGWRA
                     EERLGFEDVVRGYTLEAARASGTQRRLGRLAPGMEAD"
BASE COUNT          309 a          775 c          826 g          338 t
ORIGIN      
        1 atccggagag ggcgccgatg gtcggggtct ggagcctctc ggccgccgaa ggggcgggga
       61 acaccccccg cgacgtggcc ctccgcctct tcaccaacaa cgggcgactg gagcgggcgg
      121 ccgaggtgag cgggctcgac ctgcggaagg tccagagtga ggttcggagc ctgcccaacg
      181 agaacgacgc ctccgccccg ccgatcgggg tacggcggac gatccggctg cggaagacat
      241 tgctcacctg ggaaggccgc cgggtggacg acagcacgaa gtccaatggc cagatcacca
      301 ccgtctggcg cgccgacagc aagcggcgcg gtccgatgac ggcgagactc gccctcacgc
      361 cggagtggac caagggcatg gccggttccc tccgggtcga aggcgaggac gacttcgccg
      421 aagcggtcaa ggcatccccg gtgcggttcg tcggaccggc cattatcggg ggtggcggcg
      481 aactcgcctt cggtcgttga ttcccgccgc agaggtcatg tcgaagatgt tcataatcac
      541 tgactctgaa taaatacagg cagggtggcg acactgtcgc cttgttcccg ggccaggttt
      601 tgtgggtgct gtaagccttt atcgtagttc gtattcgaat acctgatata atccgctttc
      661 tagagtcagc ggggtcgatt tgggggtcgg gagtgccctc cgcagatatt cacgtgagcg
      721 agttatcaac atgtggaaac cgcgccggat ggcgcctttg cctctgatcc cctcgcgttc
      781 ccggtgatgc cggccgaggc cctgcgcgag ggcggcgttc tccgcggccg ccgggtcctg
      841 accctggtgg ccggcctcga aggcgacgcg atctggtggc tgcggggccg gatccaggcc
      901 gtcggtcccg cggcccggat cgaccgcgtg gcgcctcgcc atctgccccg cttcgacctc
      961 cctgacgccc tgatcacgcc gggattcgtg gacggtcaca cccacttcgc catgtgggcg
     1021 ttgggccgcc ggcgcgtcgc gctgaccggt gcccgcaccc gcgcggaggc cgtggcccgg
     1081 gtcgcggccg gcgcgccctc ccagggatgg gtgctgggcc atggctggga tgccaacgac
     1141 tggaccgagc gccccgaccg ccacgcgctc gatcgggtcc acgcgagtcc ggtgtacctc
     1201 gactcggtcg atgtccatgc cgcgtgggtc aacagcgcgg ccctcgcggt ggccaggatt
     1261 acgaccgaga ccccggaccc ccctggtggc aggatcgtcc gcgatgccgc cggtgagccg
     1321 accggagtgc tgctggagcg cgcggtcgag ctggtagccc gggtggcacc ccgaccgtcc
     1381 accgagatcc tggacgaggc gttgttggaa gcccagggcg aagcccatcg cctggggatc
     1441 accggaatcc atgacgtcga ggacgagagc gcttggggtg cgttccggcg cctggagcgc
     1501 accggcgacc tgcggctgcg ggtgctcttc cacccgccgg tcgcctcgct gccggacctg
     1561 gtccggcgag gccagcggag cggcacgggc tcgcgcctcc tcggcatggg cggcgtgaag
     1621 ctctttctcg acggcagcct cggcagccgc acggcctgga tgctcgagcc ctacgagggg
     1681 agccgggacc ggggaatgcc ggtggcgggc gagcgcgatg ccgccgaggc ggtgcgcctg
     1741 gccgcctcga acggcatcgc ggtcaccgcc catgccatcg gcgacgcggc ggtgcgccgg
     1801 gcgctcgacc tgatggagac gctcccccgc gcggcggtgc cgcaccgcat cgagcacttt
     1861 cagtgcgttc accccgcgga cctcgagcgc gcggcgcggg catgcatcgt cgcctcgatg
     1921 cagccggcgc acctgctgac cgacatcccg ctggtggaac ggcactgggg gcgtcgcggt
     1981 gggggcgcct acgcgttccg ctcgctgctc cggcacggca ccgcgctcgt gttcggaagc
     2041 gacgtgccgg tggcctcgct ggatccccgg gagggcgtgt tcgccgccat ggagcgtcgc
     2101 gccgccgacg ggacgccgcg cgacggctgg cgcgccgagg agcggctcgg gttcgaggac
     2161 gtcgtccgcg gctacacgct ggaagctgcg cgcgcctccg gcacccagcg gcgcctcggc
     2221 cggctggccc cgggcatgga ggcggacc
//
LOCUS       DASUYN010000568         2007 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1063481, whole genome shotgun sequence.
ACCESSION   DASUYN010000568 DASUYN010000000
VERSION     DASUYN010000568.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2007
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1063481"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..779)
                     /locus_tag="VF061_11100"
     CDS             complement(<1..779)
                     /locus_tag="VF061_11100"
                     /inference="COORDINATES: protein motif:HMM:NF024771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide epimerase"
                     /protein_id="HEX6670100.1"
                     /translation="MSHQLRMEIEVLELRTRHPFIIARGGQSDYRTVWVRLRDPDGHE
                     GWGEAAPTRFYGETTESVLEALDTYGRLLPDDPFDLEETERRWEQLLRRNPAARAALS
                     SALHDLVGKRLGVPLYRLWGLDPAKAPRSTFTIGLDTPENMSAKVEEAAQYPILKIKL
                     GTERDVEILRTIRDATDREIRVDANCGWTLKQTVQMLPVLKEFGVTVLEQPLAPDQLD
                     GLAEIRRRAEIPIIADESCETAADIPPLVGKVDGINIKLAK"
     gene            complement(805..1701)
                     /locus_tag="VF061_11105"
     CDS             complement(805..1701)
                     /locus_tag="VF061_11105"
                     /inference="COORDINATES: protein motif:HMM:NF013046.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase"
                     /protein_id="HEX6670101.1"
                     /translation="MAVTIFTHPDCVRHDPGPDHPETPARLRALLERARQSPAVKVVD
                     APAATRGPLLAVHSEAYLRGLESMSGRGGGVLFLDTILNRASWSAALGAAGAVLAAVD
                     HALAGRGHAFAAVRPPGHHALASKGMGFCLVNNVVVAARHARATGRERILIVDWDVHH
                     GNGTQALMETDPTIRYVSLHQHPWYPGTGMADERGVGNVFNVPRGPNRPASLYVGDLW
                     AAVLAATEDWEPELVLVSAGFDAMAGDPLGGFTLEPEHYADLTLRLRERLPRAPVVGL
                     LEGGYIPSRLADGALAHVGALQ"
     gene            complement(1703..>2007)
                     /locus_tag="VF061_11110"
     CDS             complement(1703..>2007)
                     /locus_tag="VF061_11110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670102.1"
                     /translation="ASSTAPPDAVAAPDMPVSLLAFRSLTLLAAGFLAFDGAALAAIG
                     LWSGRTSLVIVGIVLFLSSGLLLLVWRQHLRRLDEIVAARRELRDEAEELRRLLKG"
BASE COUNT          302 a          711 c          710 g          284 t
ORIGIN      
        1 cacttggcga gcttgatgtt gatcccgtcc accttgccca ccagcggcgg aatgtccgcc
       61 gcggtctcgc agctctcgtc cgcgatgatg ggaatctccg ctcggcgacg gatctcggcg
      121 agaccgtcga gctggtccgg cgccagcggc tgctccagca ccgtgacccc gaactccttc
      181 agcaccggga gcatctgcac cgtctgcttc agggtccagc cgcagttggc gtccacccgg
      241 atctcccggt ctgtcgcgtc ccggatcgtc cggaggatct cgacgtcacg ctcggtgccc
      301 agcttgatct tgaggatggg atactgggcc gcctcctcca ccttcgcgct catattctcc
      361 ggggtgtcga gcccgatggt gaaggtggac cgcggggcct tcgccgggtc cagtccccag
      421 aggcggtaga gcggcacgcc cagccgcttg ccgaccagat cgtgcagcgc cgaggaaagc
      481 gccgcccgcg cggccgggtt ccggcggagg agctgctccc agcgccgctc ggtctcttcc
      541 aggtcgaacg ggtcgtcggg caggagccga ccgtaggtgt cgagcgcttc gaggaccgac
      601 tccgtggtct cgccgtagaa cctggtcggt gcggcctccc cccacccctc gtgaccatcg
      661 gggtcccgaa gccggaccca caccgtccgg tagtcgcttt ggccgccgcg ggcgatgatg
      721 aagggatgtc tggtccggag ctcgagcacc tcgatctcca tgcggagctg gtgactcacg
      781 gcgtcctcga cgggttgggg tcgctcattg cagggcgccc acgtgggcga gcgcaccgtc
      841 ggccagccgg gacgggatgt agccgccctc cagcaggccg acgacgggcg cgcgaggcag
      901 ccgctcgcgc agccggaggg tgaggtcggc gtagtgctct ggctctagag tgaagccgcc
      961 cagcgggtcg ccggccatgg catcgaatcc ggcggagacc agcaccagct cgggctccca
     1021 gtcctccgtc gctgccagga ccgcggccca gagatcgccc acgtagagcg acgcgggccg
     1081 gttcggcccc cggggaacgt tgaacacgtt gccgacgccg cgctcgtcgg ccataccggt
     1141 gccgggatac cacgggtgct ggtgaaggga gacgtaacgg atcgtcggat cggtctccat
     1201 cagcgcctgg gtgccgttcc cgtggtgcac gtcccagtcc acgatcagga tccgctcgcg
     1261 ccccgtcgcc cgggcatgcc ttgcggcaac gaccacgttg ttcaccaggc agaagcccat
     1321 ccccttcgag gccagcgcgt ggtgaccggg cggacgcacc gccgcgaagg cgtggccccg
     1381 ccctgcaagc gcatggtcca ccgccgcgag caccgcgccg gccgccccca gggccgccga
     1441 ccagctcgcg cggttgagga tggtgtcgag gaagagcacg ccgcccccgc gcccgctcat
     1501 ggactccagg ccgcgcaggt acgcctcgga atgcacggcg aggagcggcc cccgggtcgc
     1561 cgccggtgcg tctaccacct tcacggcggg cgattgcctc gcgcgctcca ggagcgcgcg
     1621 aagccgggcc ggagtctcgg gatggtcggg gccgggatcg tggcggacgc agtcgggatg
     1681 ggtgaagatc gtgacggcca tctcagccct tgaggagacg gcggagctcc tcggcctcgt
     1741 cccgcagctc gcgcctggcc gcgacgatct cgtccagccg ccgcaggtgc tgccgccaga
     1801 cgagcagcag gagaccggac gagaggaaga gcacgatgcc gacgatcacc agcgacgtcc
     1861 gtccggacca gaggccgatg gccgccagcg cggcgccgtc gaaggcgagg aagccagcgg
     1921 ccagcagcgt cagcgatcga aacgccagca aggagacggg catgtcgggt gcggctaccg
     1981 catcgggcgg cgccgtcgag gaagcac
//
LOCUS       DASUYN010000569         3160 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_180083, whole genome shotgun sequence.
ACCESSION   DASUYN010000569 DASUYN010000000
VERSION     DASUYN010000569.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3160)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3160)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3160
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_180083"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..281
                     /locus_tag="VF061_11115"
     CDS             <1..281
                     /locus_tag="VF061_11115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670103.1"
                     /translation="NFPGRAACGCPEEGTMAVCEVCGNDYHMAFQVVAAGHTHTFDSF
                     ECAIHKLAPICDHCGCKIIGHGIEANDTFYCCAHCARKAGVTAVADHA"
     gene            complement(256..1887)
                     /locus_tag="VF061_11120"
     CDS             complement(256..1887)
                     /locus_tag="VF061_11120"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016453714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
                     /protein_id="HEX6670104.1"
                     /translation="MRAFARLYTTLDETTATGEKVAALAEYFRSAPAPDAAWAVHFLI
                     GRRPKRLVSTPKLAAWAAEAAGIPPWLFEESHAAVGDLAETITLLLPDTGVSDDRRLT
                     YWVEERLLPLRGQDEAVQREEMLRAWRELDRRERFVWNKLITGAFRVGASSGLVERAL
                     SLASGVPEAAIAHRLTGGWEPTAEFFGRLCAEDVRDTDVSRPYPFYLAHPLEGQVQAL
                     GEPTQWLAEWKWDGIRSQLIRRAGRTFLWSRGDELLNGRFPEVEAPASLLPEGTVLDG
                     ELLPWRGDRPLPFAQLQRRIGRKAITRRILDEVPVALVAYDLLEQAGEDLRPLPLEER
                     RRRLAALLAATASGGRLVLSPALEAADWAELADARLRARELGAEGLMLKRRVSAYGVG
                     RRKGDWWKWKVEPYAVDAVLMYAQAGSGRRAGLFTDYTFGVWDGDRLVAFAKAYTGLT
                     DAEIRKVDGFIRRNTVEKHGPVRVVRPELVFELAFEGIQASPRHKSGVAVRFPRIVRW
                     RTDKRPADADTLATVRALLEPPLSPAALRRDPRRR"
     gene            complement(1884..2915)
                     /locus_tag="VF061_11125"
     CDS             complement(1884..2915)
                     /locus_tag="VF061_11125"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ligase-associated DNA damage response
                     exonuclease"
                     /protein_id="HEX6670105.1"
                     /translation="MTLLRLTERGLYCEAGDFHVDPWGAVDRAVVTHAHGDHVAWGCR
                     SYLTSAEGLGVLRSRLPPEAQVSGLAWGETATLRGARLSFHPAGHILGSAQIRLEHAG
                     EVWVVSGDYKTDPDPTTTAFEPVRCHTFVTESTFGLPIYRWPPQQDVLREINDWWRAN
                     QAAGKATLLYGYALGKAQRLIAGLDPAIGPIFTHGAVERMTAVYREAGVPLPPTRHAG
                     TADRATDWSRAIVVAPPSADGSVWTRRFGPQSTAFASGWMLVRGTRRRRSLDRGFPLS
                     DHVDWPALLAAIDATAAERVWVTHGFTGPVVRWLRERGLDAHAVHTRFEGEQDDDAAG
                     RDEAGGVSE"
     gene            complement(2935..>3160)
                     /locus_tag="VF061_11130"
     CDS             complement(2935..>3160)
                     /locus_tag="VF061_11130"
                     /inference="COORDINATES: protein motif:HMM:NF012309.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006801 - superoxide metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="superoxide dismutase family protein"
                     /protein_id="HEX6670106.1"
                     /translation="EGPHAGDLPNLVAEEDGSADTTVSMSANLLAEGPSSMLGAQQRS
                     FVIHADPDDEKTDPSGNSGARVVCGVIERG"
BASE COUNT          445 a         1177 c         1110 g          428 t
ORIGIN      
        1 taaacttccc cggacgggcg gcatgcggct gcccggagga gggcaccatg gcggtctgcg
       61 aagtctgcgg caacgactac cacatggcgt tccaggtggt cgccgcggga cacactcata
      121 ccttcgacag cttcgagtgc gcgattcaca agctggcgcc gatctgcgac cactgcggct
      181 gcaagatcat cgggcacggg atcgaggcga acgacacgtt ctactgctgc gcccactgtg
      241 cgcggaaggc aggggtcacc gccgtcgcgg atcacgcctg agggccgcag gcgacagggg
      301 cggctccagc agggcccgca ccgtcgccag tgtatcggca tccgcgggcc gcttgtccgt
      361 ccgccaccgg acgatccggg ggaagcgcac cgccacaccc gacttgtgcc tgggcgaggc
      421 ctggatcccc tcgaacgcca gctcgaacac cagctccggc cgcaccaccc gcacgggccc
      481 gtgcttctcc acggtgttcc ggcggatgaa cccgtccacc ttccggatct ccgcgtcggt
      541 gagccccgtg taggccttgg cgaaggccac cagccggtcg ccgtcccaga cgccgaaggt
      601 gtaatcggtg aagagtccgg cccgccgccc gctccctgcc tgggcgtaca tcagcaccgc
      661 gtccacggcg tacggctcca ccttccactt ccaccagtcg cccttgcggc gtccgacacc
      721 gtaggcgctg acccgccgct tgagcatcag cccctcggcg ccgagctccc gcgcgcgcag
      781 ccgggcatcg gccagctccg cccagtcggc ggcctccagc gccggcgaga gcaccagccg
      841 tcccccggag gcggtcgccg ccagaagcgc ggcgagccgg cgacgtcgtt cctcgagcgg
      901 gagcggtcgc agatcctcgc cggcctgttc cagcaggtcg taggcgacga gcgcgaccgg
      961 cacctcgtcc aggatcctcc gggtgatcgc ctttcggccg atgcgacgct ggagctgcgc
     1021 gaacgggagc ggccgatcgc cgcgccatgg cagcagctcg ccgtccagca cggtgccctc
     1081 gggcagcagc gaggcgggcg cctccacctc cgggaatctg ccgttcagga gctcgtcgcc
     1141 ccgggaccag aggaaggtcc gtccggcccg ccggatgagc tgtgaccgga tgccgtccca
     1201 tttccactcc gcgagccatt gcgtgggctc gcccagcgcc tgcacctgcc cttccaacgg
     1261 atgcgcgagg tagaacgggt agggccgact cacgtcggtg tcgcgcacgt cctcggcgca
     1321 gagccggccg aagaattccg ccgtcggctc ccacccgccg gtgaggcgat gggcgatcgc
     1381 ggcttccggc acaccgctcg cgagcgacag cgcccgctcg accaggccgg aggatgcccc
     1441 cacgcgaaag gccccggtga tcagcttgtt ccagacgaag cgctcgcgcc ggtccagctc
     1501 gcgccaggcg cggagcatct cctcgcgctg caccgcctcg tcctgccccc gcagcgggag
     1561 gagccgctcc tccacccagt aggtcaggcg gcgatcatcc gacacgccgg tgtcgggcag
     1621 gagcagcgtg atcgtctccg cgaggtcccc gacggccgcg tggctctcct cgaacagcca
     1681 gggcgggatc ccggccgctt ccgccgccca ggccgcgagc ttcggcgtgg ataccagccg
     1741 cttgggccgg cgcccgatca ggaagtgcac ggcccaggcg gcatccggcg cgggagcgct
     1801 gcggaagtac tccgccaggg cggccacctt ctcgccggtc gccgtcgtct cgtcgagggt
     1861 ggtgtagagc cgggcgaagg ctctcactcc gataccccgc cggcctcgtc ccgtcccgcg
     1921 gcgtcgtcgt cctgctcgcc ctcgaaccgg gtgtgcaccg cgtgcgcgtc gagtccgcgc
     1981 tcccggagcc atcgcaccac cggcccggtg aacccgtggg tcacccacac tcgctcggcg
     2041 gcggtcgcgt cgatggccgc gaggagggcg ggccagtcca catggtcgga gagggggaag
     2101 ccgcgatcca gggagcgacg ccggcgcgtg ccgcgcacca gcatccagcc ggaggcgaaa
     2161 gcggtggact ggggcccgaa gcgccgggtc cacaccgacc cgtccgccga cgggggcgcg
     2221 acgacgatcg cccgcgacca gtcggtggcc cggtccgccg tcccggcatg ccgggtgggc
     2281 ggcagcggga cgccggcctc gcggtagacc gccgtcatcc gctccaccgc gccgtgggtg
     2341 aagatcggcc cgatggccgg gtccagcccc gcgatgagcc gctgtgcctt gccgagggcg
     2401 tagccgtaca acagggtcgc cttgccggcc gcctgattgg cgcgccacca gtcgttgatc
     2461 tcgcggagaa cgtcctgctg cggcggccag cggtagatgg ggagaccgaa ggtggactcg
     2521 gtgacgaagg tgtggcagcg caccggctcg aatgccgtgg tggtgggatc gggatcggtc
     2581 ttgtagtccc ccgagaccac ccagacctcg ccggcatgct cgagccggat ctgggccgag
     2641 ccgaggatat gaccggccgg atgaaacgag aggcgcgcgc cccggagcgt cgcggtctcc
     2701 ccccaggcga ggccgctcac ctgcgcctcg ggcgggaggc ggcttcgcag cacgcccagc
     2761 ccttcagccg aggtgagata gctgcggcag ccccaggcga cgtgatcgcc gtgggcgtgg
     2821 gtgaccaccg cgcggtccac ggcgccccac gggtccacgt ggaagtcgcc cgcctcgcag
     2881 tagaggccgc gctccgtgag tcggaggagc gtcatccggc cccggccgcg cggctcagcc
     2941 gcgctcgatc accccgcaga ccactcgcgc gccggagttg ccgctggggt cggtcttctc
     3001 gtcgtcgggg tcggcgtgga tcacgaagga gcgctgctgg gcgccgagca tcgagctggg
     3061 gccttccgcc aggagattgg ccgacatgct cacggtcgtg tcggcgctcc cgtcctcctc
     3121 cgccactagg ttcggcaggt cgcccgcgtg cgggccctcg
//
LOCUS       DASUYN010000570         2234 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1724633, whole genome shotgun sequence.
ACCESSION   DASUYN010000570 DASUYN010000000
VERSION     DASUYN010000570.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2234)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2234)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2234
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1724633"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..317
                     /locus_tag="VF061_11135"
     CDS             <1..317
                     /locus_tag="VF061_11135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670107.1"
                     /translation="WMNVVRAMSSEGWGRIAYHTTIRGLLDTDRSVRGFMEGEEQALP
                     PFYQARIQRDLGELHRHLPDGAVMHDPNAYLKSVGQATITPIAGTRRPRAAAPADAPV
                     LN"
     gene            573..779
                     /locus_tag="VF061_11140"
     CDS             573..779
                     /locus_tag="VF061_11140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock domain-containing protein"
                     /protein_id="HEX6670108.1"
                     /translation="MRTNGTVKWFNDAKGFGFITPADGQKDCFVHHSAIQGQGFKSLS
                     EGDRVEFDIVQGQKGPAAENVVKL"
     gene            921..>2234
                     /locus_tag="VF061_11145"
     CDS             921..>2234
                     /locus_tag="VF061_11145"
                     /inference="COORDINATES: protein motif:HMM:NF018905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670109.1"
                     /translation="MCHSPLRAASLALSAALAVTLASCGGEPTRPDLDPASRTAAAAG
                     PPAAIQVNVQPPASALSATVTLSPLPAEAATGRWDAPVDWDIVPLHLSLLPTGKLLAW
                     GKFETGTSAMANPRLWDPSAGAPGAAISLPAPDMLFCSGHALMADGRLMVSGGHLADD
                     RGLRATNIFDPVTQTWTTGLPKMAQGRWYPTVTTLADGRIVTVAGRDSAANEVLVPEI
                     WEGGKWVRLPGASLRLPYYPFLFLAPNGKVFYAGDRVQGRWLDVDATTTKGRGRWTTA
                     ASLKHLWAFNRDYGSAVMYETGKVLVVGGGGDPTRSTPDPKSATPTATAETIDLNLTG
                     STWRNTDPMRFARRHLNATILPDGQVLVTGGTSAGGFNTLAGTVRAAEVWNPQTGRWT
                     QLAANAVDRVYHSVSLLLPDGTVLHGASGDALAPGGAPYPARRSHE"
BASE COUNT          328 a          802 c          793 g          311 t
ORIGIN      
        1 ggtggatgaa cgtggtgcgg gcgatgtcgt ccgaaggctg ggggcggatc gcgtaccaca
       61 ccaccatccg ggggctgctc gacaccgacc ggagcgtgcg cgggttcatg gagggggagg
      121 agcaggcgct gccgcccttc taccaggccc ggatccagcg ggacctgggc gagctgcacc
      181 gccacctgcc ggacggggcg gtcatgcacg acccgaacgc gtacctgaag agcgtggggc
      241 aggcgacgat caccccgatc gcgggcaccc gccgcccccg ggccgcggcg ccggccgacg
      301 cgcccgtgct caactgaccc cgtcttgccg cccggggtgc cgcgaggtac tttggtgccc
      361 tatccggggg cgctgagccc ccggactcaa cgtgatcagg cagggggccg gcgttgatgc
      421 cggccccttg ggcgtttgca ggggctgccg ttgtaggcgc acgccgcgcc gcggcagccg
      481 agccccgcgt gggggcggga gccacgccac ccgtagtcgg tcgtgcggca tgtcctcact
      541 ccgattacac cataggcaag gagcagggag atatgcgtac gaacgggacg gtcaagtggt
      601 tcaacgacgc gaagggcttc ggcttcatca cccccgcgga cggtcagaag gactgcttcg
      661 tccaccactc ggcaatccag gggcaggggt tcaagagtct gtcggaaggc gaccgggtgg
      721 agttcgacat cgtgcagggg cagaagggac cggcggcgga gaacgtcgtc aagctgtagg
      781 ctgcagcgag acgtcgtagc tggtcgggcc ggctcgtctt cggacgggcc ggcccattcc
      841 attcccggtc agtcctgcaa agcgcccgga atgccccgag cttggtagcg gtccagggat
      901 tctgccgcca gattgccctc atgtgccact cacccctccg tgccgcttcc ctcgccctct
      961 ccgccgctct cgcggtcacc ctcgcctcct gcggcgggga gcccacccgg cccgacctcg
     1021 acccggcatc acggaccgcg gccgccgcgg gtcccccggc ggccatccag gtgaacgtcc
     1081 agccgcccgc cagcgcgctc tcggccacgg tcacgctgag cccgctgccg gcggaggccg
     1141 ccactggccg gtgggacgcc ccggtggact gggacatcgt gcccctccat ctgagcctgc
     1201 tgccgaccgg taagctgctc gcgtggggga agttcgagac cggcacgtcg gcgatggcca
     1261 atccccggct gtgggacccc tccgccggcg cccccggcgc ggcgatctcg ctccccgccc
     1321 ccgacatgct gttctgctcc ggacacgcac tcatggccga cgggcggctg atggtgtccg
     1381 gcggccatct cgcggacgac cgcggtctcc gggcgaccaa catcttcgac ccggtcaccc
     1441 agacctggac gacggggctg ccgaagatgg cccagggccg ctggtacccg accgtcacga
     1501 ccctggccga cgggcggatc gtcacggtgg cgggccgcga ctcggcggcg aacgaggtcc
     1561 tggtgccgga gatctgggag ggcgggaagt gggtgcgcct cccgggcgcc agcctgcggc
     1621 tgccctacta ccccttcctc ttcctggcgc cgaacgggaa ggtgttctac gcgggcgacc
     1681 gggtgcaggg gcgctggctc gacgtggacg cgaccaccac caaggggcgc ggcaggtgga
     1741 ccacggccgc gtcgctcaaa cacctgtggg cattcaaccg cgactacggc tccgcggtga
     1801 tgtacgagac ggggaaggtc ctggtggtgg gcggtggcgg cgatcccacc cggagcaccc
     1861 ccgacccgaa gtccgccacg cccacggcga ctgccgagac gatcgacctc aacctcacgg
     1921 ggtcgacgtg gaggaatacc gatccaatgc gcttcgcccg ccggcacctc aacgcgacca
     1981 tcctgcccga cgggcaggtt ctggtcaccg gcggcaccag tgcgggaggc ttcaacaccc
     2041 tcgcgggcac ggtccgggcg gccgaagtat ggaatccgca gaccggccgc tggacccagc
     2101 tcgcggccaa cgccgtggac cgggtctatc actcggtctc gctgctcctg ccggacggta
     2161 ccgtgctcca cggcgcgagt ggcgacgctt tggcgccggg tggcgcgccc tatccggcgc
     2221 gaaggagcca cgag
//
LOCUS       DASUYN010000571         2538 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_621817, whole genome shotgun sequence.
ACCESSION   DASUYN010000571 DASUYN010000000
VERSION     DASUYN010000571.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2538)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2538)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2538
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_621817"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1015
                     /gene="coxB"
                     /locus_tag="VF061_11150"
     CDS             <1..1015
                     /gene="coxB"
                     /locus_tag="VF061_11150"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR02866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome c oxidase subunit II"
                     /protein_id="HEX6670110.1"
                     /translation="DDRAGPREVEHATPGRAAVIQFPGAHSAHAPAGPQALLLDRLGG
                     MMYVIAALAFVVVVVALLVAVFRPRREAAGVEAPGAERRMAMAVAIAAGGTVATLVAV
                     LFLSFGTGRQLAATPPSDALQVRVTGRQWWWEVEYRDSVPNRWATTANEIHVPVGRPV
                     VFELRGGDVIHSFWVPNLGVKRDMIPGQETSVWFRADSAGVYRGLCAEFCGYQHAQMA
                     FLVVAEPPEQFAAWLDRQRDTARTPADSQALRGQEVFLASSCVMCHAIGGTPAGSRVG
                     PNLTHVAGRRTLAAGTLPNTRGHLAGWIIDPQQIKPGARMPPSAIRPQDLQALLAYLE
                     TLR"
     gene            1012..>2538
                     /gene="ctaD"
                     /locus_tag="VF061_11155"
     CDS             1012..>2538
                     /gene="ctaD"
                     /locus_tag="VF061_11155"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR02891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit I"
                     /protein_id="HEX6670111.1"
                     /translation="MTAATVDRLDPVTLERERRELERAWSTRPGLRGWLTNTDHKSVG
                     KRYIVTAMVFFLLGGVEAALIRIQLARPEHGLIGPDAYNQIFSTHGTTMMFLFAVPIL
                     TATGLYLVPLMIGTRNVAFPRLNLYGYYVYLIGGGLLYAGLLLNVGPEAGWFSYVPLA
                     GPEFSPGKRSDIYAQTVTFTEISALITSVEIIVTVFKQRAPGMSLNRMPLFVWAQLVT
                     AFMIVFAMPWVATASMFLAMDRLIGTHLFNPAEGGDPLLWQHLFWFFGHPEVYIIFVP
                     ALGFVSSIVSTFARRPIFGYPVMVLSLVVTGFLGFGLWVHHMFATGIPQLSQSFFSAV
                     SMMIAVPTGVQIFCWIATLWAGRPRLRVPLLFVLGFVVVFIIGGFTGVMVASVPYDVQ
                     AHDSYFVVAHLHYVLLGGAVFPLFGAFYYWWPKVTGRMLDERLGRWHFWLFFAGVNLT
                     FFPMHQLGLDGMPRRVYTYLPETGWGPLNLVATIGALTIAVSVALFLVNLARSLRGGA
                     P"
BASE COUNT          335 a          891 c          853 g          459 t
ORIGIN      
        1 cgacgaccga gcaggccccc gtgaagtcga gcacgccacc ccaggccgag cagccgtgat
       61 ccagttcccc ggcgcacact ccgcccacgc tcctgcgggc cctcaggcgc tgctcctcga
      121 ccgcctgggc ggcatgatgt acgtgatcgc cgccctggcg ttcgtggtgg tggtcgtcgc
      181 cctgctggtt gccgtctttc gcccccgacg cgaggccgct ggggtggagg cccccggcgc
      241 cgagcggcgg atggcgatgg ccgtggcgat cgcggcgggc gggaccgtgg ccacgctggt
      301 ggcggtactg ttcctgagct tcggaaccgg ccgccagctc gccgcgacgc cgccgtcgga
      361 cgcgctccag gtccgggtaa ccggccggca gtggtggtgg gaggtggaat accgcgactc
      421 ggtgcccaac cgctgggcca cgacggcgaa cgagatccac gttccggtcg gacgtcccgt
      481 cgtcttcgag ctgcgcggcg gcgacgtgat ccacagcttc tgggtgccga acctgggcgt
      541 gaagcgcgac atgatcccgg gacaggaaac cagcgtctgg ttccgggccg actcggccgg
      601 cgtctatcgg ggcctgtgcg ccgaattctg tggataccag cacgcccaga tggcgttcct
      661 cgtcgtggcc gagccgccgg agcagttcgc ggcgtggctc gaccgccagc gtgacaccgc
      721 gcgcacgccg gccgactccc aggcattacg ggggcaggag gtgttcctcg cctccagctg
      781 cgtcatgtgc catgcgatcg gcggcacgcc ggcggggagc cgggtggggc cgaacctcac
      841 ccatgtggcc gggcgccgca ccctcgccgc cggtacgctg cccaacaccc gcggacacct
      901 cgccgggtgg atcatcgacc cccagcagat caagccgggc gcccgcatgc caccgagcgc
      961 gatccggccc caggatctcc aggcgctgct cgcgtacctc gagactctcc gatgacggcg
     1021 gccacggtgg accggctcga tccggtgacc ctggagcggg agcgacggga gctggagcgc
     1081 gcctggagca cccggcccgg gctccggggc tggctcacca ataccgatca caaatccgtg
     1141 gggaagcggt acatcgtcac cgcgatggtg ttcttcctgc tggggggtgt cgaagccgcg
     1201 ctgatccgga tccagctcgc ccgccccgag catggtctca tcggccctga cgcctacaac
     1261 cagatcttct ccacccacgg caccaccatg atgttcctgt tcgcggtgcc gatcctgacc
     1321 gcgaccgggc tgtatctcgt gcctctgatg atcgggaccc ggaacgtcgc gttcccccgg
     1381 ctcaacctgt acgggtacta cgtctacctg atcgggggcg ggctgctcta cgcgggactg
     1441 ctgctgaacg tgggccccga ggcgggctgg ttcagctacg tcccgctcgc cggtccggag
     1501 ttctctcccg gcaaacggag cgacatctac gcccagacgg tgaccttcac cgagatctcc
     1561 gcgctcatca cctcggtcga gatcatcgtc accgtgttca aacagcgcgc gcccgggatg
     1621 tcgctcaacc ggatgccgct tttcgtgtgg gcccagctgg tcacggcgtt catgatcgtg
     1681 ttcgccatgc cctgggtggc caccgcgagc atgtttctcg cgatggaccg gctcatcggc
     1741 acccatctct tcaacccggc ggagggcggc gacccgctgc tctggcagca cctgttctgg
     1801 ttcttcggcc acccggaggt ctacatcatc ttcgtgccgg ccctcggctt cgtgtccagc
     1861 atcgtctcca ccttcgcccg gcggccgatc ttcggctatc cggtgatggt gctctccctg
     1921 gtggtgaccg ggttcctcgg gttcggcctc tgggtgcacc acatgttcgc caccgggatt
     1981 ccgcaactca gccagagctt cttcagcgcg gtgagcatga tgatcgcggt cccgaccggg
     2041 gtgcagatat tctgctggat cgcgacgctc tgggccgggc gaccgcgcct gcgggtgccg
     2101 ctcctcttcg tgctgggctt cgtggtggtg ttcatcatcg gcgggttcac cggcgtgatg
     2161 gtggcgtcgg tgccgtacga cgtgcaggca cacgacagct acttcgttgt ggcgcacctc
     2221 cattacgtgc tgctcggggg ggcggtgttc ccgctgttcg gcgcattcta ctactggtgg
     2281 cccaaggtga ccgggcggat gctcgacgag cggctgggcc gctggcattt ctggctcttc
     2341 ttcgccgggg tgaacctgac gttcttcccg atgcaccagc tggggctgga cggcatgccg
     2401 cggcgggtct acacctacct gccggagacc ggctggggcc cgctcaatct cgtggccacc
     2461 atcggcgcgc tcacgatcgc ggtcagcgtg gcgctcttcc tggtcaatct ggcgcggagc
     2521 ctccgcggcg gtgcccct
//
LOCUS       DASUYN010000572         7288 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_621856, whole genome shotgun sequence.
ACCESSION   DASUYN010000572 DASUYN010000000
VERSION     DASUYN010000572.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7288)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7288)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7288
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_621856"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(273..1349)
                     /locus_tag="VF061_11160"
     CDS             complement(273..1349)
                     /locus_tag="VF061_11160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HEX6670112.1"
                     /translation="MRVRWAPVFALLAGLPLPLAAQLYVPNQDDATVSVVDPAGGRLL
                     RTVNLRRYGVGDNAKPHHVQVEPDGSAWYVTLIGAGKVLKLDRDDRVLGSVEMEVPGL
                     IALHPSKDLMFVARSMSAVNPPPRMAVIRRSDMALLDEVDLLFPRPHGIVVHPGGEVV
                     YVASLGTNQLAAIGIEGGEVRLTEVPGPPYGFVQAAVSPDGRLLAVTAELTDSLLVFD
                     LAVPTAPKLTRRVPMPDGPFEPAFSPDGRTIFVTALNADRVAAVDTRSWTVALLPEHP
                     GYGQPHGIALSSDGSRLFVGNRHQAGGVHDHAGGRPTAPGTVVAICLPTREVDTVVTV
                     GHYAAGLGLTPARVGSSAAARSCP"
     gene            complement(1346..3805)
                     /locus_tag="VF061_11165"
     CDS             complement(1346..3805)
                     /locus_tag="VF061_11165"
                     /inference="COORDINATES: protein motif:HMM:TIGR04312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="choice-of-anchor B family protein"
                     /protein_id="HEX6670113.1"
                     /translation="MRLPRVPLHFVSAAGVAALVAVVAVAGTASAQTFREDPPTSIGF
                     GGAALVVGDQVVIGRPGTLIGFPIPASHAGTVHVFRRSGDRWTETAALSAKDGSLGDG
                     FGTALAADGDLLVIGAPGAAGGGAVYVFQRGAGGGWTERARLAATGGADGDRLGASVA
                     LRGGVLLAGAPGREAERGTVLVFARGRGVTDWASRGAFQGGSTAEGDWFGAAVAFDGQ
                     RALVGAPGGWSLDSTRWRAGQAFLFRPGRDGAWTEEARLTPPAADSQASLGVAVLLDG
                     GEVLVGAPRADSMAGSVLRYRREGARWSSAGAIAPDSAIRPAAFGAALARDGSDLLIG
                     APSAHSSAGAVYVFRRGGEGWRQVQLLVTPPSGYSTRLGAAVAARSGVAVAGAPLADF
                     FEGTGLVYQREGSTGRWRQMAAVTDTVSSVLPAIAGGEVRCQGGRARAFDCRDADLVA
                     FLPKSAVGAKRGTLLNDIWGWIDSTTGREFAIVGRTDGTSFVEVTDPANPKYLGDLPL
                     HAGARPNIWRDMKVYKNHAFIVADGAGPHGMQIFDLTQLRNVTTPQTFQETAHYDQIA
                     SAHNIVINEATGFAYPVGNSMGGTTCGGALHMVDVREPAKPKFAGCFADPSLGMQRTG
                     YTHDAQCVVYHGPDTRYHGRELCFTSSEIALGIADVTDKATPRAVSTAAYPNVAYAHQ
                     GWLSDDHRYFFLDDEGDELAGTAPRTRTVVFDLTDLEDPVVAKEFYGNTAASDHNLYV
                     KGRYMYQSNYVAGLRVVDVSDPTNPVEVGHFDTVPVGENLPGFSGSWSNYPYFKSGVV
                     AATSMREGLFLIRYQPSAVVP"
     gene            3933..4406
                     /locus_tag="VF061_11170"
     CDS             3933..4406
                     /locus_tag="VF061_11170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670114.1"
                     /translation="MHRQTFLALALAAGLFAAPAAAQSGTPGAPPADTGRRMMKDPVT
                     RLLERREQLQLTDDQARRLEQIRTKYQQKHQGHMEQMRRDREARSAFRASMDSARAEV
                     AAVLTPAQQKQVEAMREEWRREWRAEHGGRHRHGGEHGRHHDDDDDDDDDDGKDG"
     gene            complement(4495..7104)
                     /locus_tag="VF061_11175"
     CDS             complement(4495..7104)
                     /locus_tag="VF061_11175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670115.1"
                     /translation="MVSFLKGRRRTDDGVVAVDSSGAHVTLALETLVARAEQALEQLR
                     ALTSVLERSEDINTLRERCEAVEQKVAEMEGTQARIAAAEAQVQRVAGAGAEIDQLHG
                     RLGEFGHKIDAALKLREQIEGFLSLEGPIGTVRTDAEGLRKQLDEMGEDVTRMRTQAD
                     DALRAHRHSTARLEHFNEEYQTVTGRLDEVGRRVQAVERALEPVGQAVSAVPDVQHRL
                     AVLKALADQVAQKSAALEQQREAVDRAATQISQLTRLDRELDAWLRRQEEQIRRFGAI
                     EAKIAEVQAVQGKVMSRSEELQQMATLTEEAQQAARQSLNDLREQMRKSSESFELENR
                     GLHAVSERVADLRNAVKECESRFAVLDAASQGTAAVTAQIRSAGEQAAELAAELGRLL
                     EEEQKISQLRQEVGRLDGVASEVAGRMQRIEELRPGIEAAVKDLGSLKGIREMMADGL
                     EQMRVAYEEMTRLRETHGEVETWLTNTDTWTKKVQGQVKELSGMEPAVERIRDDVEQV
                     KAAMSEIESRREALNDVQRRLGDLGAVSAELKERAEALRGRMEAAESRFGQLAKQAED
                     AQLVADTMAEVTSSVSDAEKRMSSVDESVRTLESRTGQLDELQDRIRLLGQELDQRQG
                     ALDKATEHLTRASALRQEAAETAQRLEEVSRTVTSTLANAEERSGALKKVTGDLESRA
                     SALKPIERQLSEFEDLLGRWESAQAEAAKGLEQTLARQGAVEALEAEVKNVFELAQRA
                     VDNVQVIGSSRREIDETRALLEDTQNRFQVNEQALRDFEARKRALDRAEQRLARAEAL
                     ALGIKTTVESLQAQKTVVDHAMDSAGALGLQMKQAEALIASLRRERSLAADLKAAVAA
                     LEDVEDEKDEQPE"
BASE COUNT         1025 a         2626 c         2568 g         1069 t
ORIGIN      
        1 gccgtcacgc tcgaacaggc cgacgctccc ggtcacctcc tggaggaaga ggtcgagatc
       61 gccgtcgccg tcggcatcca ccagctgcgg acggggggcg ttgaatccgc cgtggaaggg
      121 gatctcgagc gcgcggccgg atgggtccat cacgggaaag ggcgcgacga cctggcggaa
      181 ctgaaccgct cgctcgaccg gcgacggtgg cgctggggga gtccccccgc aggcggcagc
      241 ggcgaggagg agaagcgggc ccggccggag gctcagggac aggatctcgc tgccgcggat
      301 gagccgacgc gcgctggcgt cagcccgagc ccggccgcgt agtggcccac cgtgaccaca
      361 gtgtccacct cgcgggttgg caggcagatg gccaccacgg ttccgggtgc ggtcggccgg
      421 ccgccggcgt ggtcgtggac gccgcccgcc tggtgccggt ttcccacgaa cagccgggag
      481 ccgtcggagg agagggcgat cccgtgcggc tgcccatacc ccgggtgctc gggaagcagg
      541 gccacggtcc aggacctggt gtccaccgcc gcgacgcggt cggcgttgag ggcggtgacg
      601 aagatcgtgc ggccgtccgg actgaaggcc ggctcgaagg gtccgtcggg catcggcacg
      661 cgtcgggtga gcttcggggc cgtgggcacg gcgaggtcga acaccaggag cgagtccgtc
      721 agctccgcgg tgacggcgag cagccgtccg tcaggggaca ccgcggcctg cacgaatccg
      781 tacggaggcc ccgggacctc ggtcagccgg acctcgcctc cctcgatgcc gatcgccgcg
      841 agctggttgg tgcccaggct cgcgacgtac accacctcgc ccccggggtg gaccacgatg
      901 ccgtgcgggc gtggaaagag gaggtctacc tcgtcgagca gcgccatgtc cgaccgacgg
      961 atcacggcca tcctcggcgg cgggttgacc gcgctcatcg accgggcgac gaacatcaag
     1021 tccttcgagg ggtgcagggc gatcaggccc ggcacctcca tctcgacgct gccgagcacc
     1081 cggtcgtcgc ggtccagctt gaggaccttc cccgccccga tgagggtcac gtaccacgca
     1141 ctcccgtcgg gctccacctg gacgtggtgc ggcttggcgt tatcgcccac gccgtagcgc
     1201 cggagattca cggtccggag caggcggccg cccgcgggat cgaccacgga gacggtggcg
     1261 tcgtcctggt tgggcacgta gagctgcgcc gcgagcggaa gcggcaagcc cgcgagcagg
     1321 gcgaacaccg gcgcccaccg caccctcacg gcacgaccgc gctgggctgg tagcggatca
     1381 ggaagagccc ctcgcgcatg ctcgtcgccg ccaccacgcc gctcttgaag tagggatagt
     1441 tgctccagga gccggagaag ccggggaggt tctcgcccac cggtaccgtg tcgaagtgcc
     1501 ccacctccac cggattggtg gggtcgctca cgtccaccac ccggagaccg gccacgtagt
     1561 tcgactggta catgtagcga cccttgacgt acaggttgtg gtccgaggcg gcggtgttgc
     1621 cgtagaactc cttcgcgacc acgggatcct cgaggtcggt gagatcgaac accaccgtgc
     1681 gggtgcgagg cgcggttccc gccagctcgt ccccctcgtc gtccaggaag aagtaccggt
     1741 ggtcgtcgct cagccatccc tggtgcgcgt aggcgacgtt gggataggcg gcggtgctca
     1801 ccgccctggg ggtggccttg tcggtcacgt cggcgatgcc gagggcgatc tcggaggagg
     1861 tgaagcagag ctcgcgcccg tggtagcggg tgtcgggccc gtgatagacc acgcactggg
     1921 cgtcgtgggt gtagccggtc cgttgcatcc ccagcgacgg gtcggcgaag cagccggcga
     1981 acttcggctt cgccggctcg cggacgtcca ccatgtggag cgccccgccg caggtcgtgc
     2041 cccccatgct gttccccacc gggtaggcga agccggtggc ctcgttgatc acgatgttgt
     2101 gggcgctggc gatctggtcg tagtgggccg tctcctggaa cgtctgcggc gtggtgacgt
     2161 tgcgcagctg ggtcaggtcg aagatctgca taccatgcgg cccggcgcca tcggcgacga
     2221 tgaacgcgtg attcttgtag accttcatgt cgcgccagat gttgggccgg gcgccggcat
     2281 gcagcggcag atcgcccagg tacttcgggt tggccggatc ggtcacctcc acgaaggagg
     2341 tgccgtcggt gcggcccaca atggcgaact cccgcccggt ggtggaatcg atccagcccc
     2401 agatgtcgtt cagcagcgtg ccccgcttcg cgccgaccgc gctcttcggc aggaaggcca
     2461 cgaggtcggc gtcgcggcag tcgaaggccc gggcccggcc gccctggcat cgcacctcgc
     2521 ccccggcgat cgcgggaagg acgctggaaa cagtgtcggt caccgccgcc atctgacgcc
     2581 acctcccggt ggagccctcc cgctggtaga ccaggcccgt cccctcgaag aagtcggcga
     2641 gcggcgcccc agcgacggcc acgcccgagc gggccgcgac cgcggcaccc aggcgggtgg
     2701 agtagcccga tggcggcgtg accagcagct gcacctggcg ccatccctcc ccgccgcgac
     2761 ggaagacgta caccgctccg gcgctggagt gggcgctcgg cgcgccgatc agcaggtccg
     2821 atccgtcccg cgccagggcg gcgccgaagg ccgccggccg aatcgccgaa tcgggcgcaa
     2881 tggctccggc ggacgaccag cgcgcgccct cgcgccggta gcgcagcacc gagcccgcca
     2941 tggagtcggc acggggcgca cccaccagca cctcgccgcc gtcgaggagc acggcgacgc
     3001 cgagcgaggc ctggctgtcg gcggcgggcg gggtgagtcg tgcctcctcg gtccaggcgc
     3061 cgtcccgacc gggccggaag aggaatgcct ggcccgctcg ccagcgggtg gagtcgagcg
     3121 accacccgcc gggcgctcca accagcgcgc gctgcccgtc gaacgcgacc gcggccccga
     3181 accagtcgcc ctccgcggtg gacccgccct ggaacgcgcc ccgagatgcc caatcggtca
     3241 cccctctgcc ccgggcgaag accagcacgg ttccacgctc ggcctcgcgc cccggcgccc
     3301 cggcgagcag caccccgcca cgaagcgcga ccgaggcacc gagtcggtcg ccgtcggcac
     3361 cgcccgtggc cgcgagcctt gcgcgctcgg tccagccgcc tccggcgccc cgctggaaga
     3421 cgtagaccgc gccgccgccc gccgccccgg gcgcaccgat gacgagcaga tcgccgtcgg
     3481 cggcgagtgc ggtcccgaag ccatccccca ggctcccgtc cttcgcgctc agcgcggccg
     3541 tctcggtcca gcggtcgccg ctccggcgga agacgtggac tgtgccggca tggctcgcgg
     3601 gaatgggaaa gccgatgagg gtacccggcc ggccgatgac cacctggtcg cccaccacca
     3661 gcgccgcccc gccgaatccg atcgaagtcg gcgggtcctc acggaacgtc tgggcggagg
     3721 cggtcccggc gaccgccacg acggcgacga gggcggcgac gccggcggcg gacacgaagt
     3781 gaagcggaac gcgggggagg cgcatttgcg ggatatcccg ggttggggct ggggagagtc
     3841 tacacctgcc gttcgaactt gggaacataa ccggcttaac agccgaggcc cggaaccgtc
     3901 caccgggggt aaccccaacc cgaggtacga tgatgcaccg acagactttc ctcgccctcg
     3961 cgctggcggc cgggctcttc gcagctcctg ccgccgccca gtccggcacg ccgggcgcgc
     4021 ctcccgccga cacgggtcgt cgcatgatga aggatccggt gacccggctc ctggagcggc
     4081 gggagcagct ccagctgacc gacgaccagg cccgccggct ggagcagatc cggacgaagt
     4141 atcagcagaa gcaccagggc cacatggaac agatgcggcg tgaccgcgag gcgcgatcgg
     4201 ccttccgggc gagcatggac agcgcccgtg ccgaagtcgc ggcggtgttg acgccggcgc
     4261 aacagaagca ggtggaagcg atgcgggagg agtggaggcg ggagtggcgg gcggagcacg
     4321 ggggccgtca tcggcatggc ggggagcacg ggaggcacca tgacgacgat gatgacgatg
     4381 atgatgacga cgggaaggat gggtgaagga cgggtgtcac cctgagcaaa gcgaaggggg
     4441 ccatggtagc atggtcccct tcaccgcgtt cagggtgaca tccccctcga cacgctactc
     4501 gggctgctcg tccttctcgt cctccacatc ctcgagcgcg gcgacggccg ccttgaggtc
     4561 cgcggccagt gaccgctcgc ggcggagcga ggcgatcagc gcctcggcct gcttcatctg
     4621 tagcccgagc gcgcccgccg aatccatggc gtggtccacc accgtcttct gggcctggag
     4681 gctctcgacg gtggtcttga tgccgagggc cagcgcttcg gcccgggcca gccgctgctc
     4741 cgcccggtcg agcgcccgct tgcgggcctc gaagtcgcgc agcgcctgct cgttcacctg
     4801 gaaccggttc tgggtgtcct ccagcagggc ccgggtctcg tcgatctcgc gccgcgacga
     4861 tccgatgacc tggacgttgt ccaccgcccg ctgcgccagc tcgaatacgt tcttgacctc
     4921 ggcctcgagg gcctcgaccg cgccctggcg cgccagggtc tgctccagcc ccttggcagc
     4981 ctcggcctgg gccgactccc agcggccgag caggtcctcg aactcggaca gctgacgctc
     5041 gatcggcttg agcgccgagg cccggctctc gaggtcgccg gtcaccttct tcagcgcgcc
     5101 ggagcgctct tcggcgttcg cgagcgtcga ggtgacggtg cgggacactt cctccagccg
     5161 ctgcgcggtc tcggccgcct cctgccggag cgccgaggcg cgggtgaggt gctcggtcgc
     5221 cttgtccagc gcgccctgcc gctggtcgag ctcctggccg agcagccgga tccggtcctg
     5281 gagttcgtcg agctgcccgg tgcggctctc cagcgtccgg accgactcgt ctaccgagga
     5341 catgcgcttc tcggcgtcgg agaccgagct ggtgacttcg gccatggtgt cggcgacgag
     5401 ctgggcgtcc tccgcctgct tggcgagctg gccgaaccgc gactcggcag cctccatccg
     5461 accgcgcagc gcctcggcgc gctccttcag ctccgcgctc actgccccga ggtcgccgag
     5521 acgccgctgc acgtcgttca gcgcttcgcg tcgggattcg atctcgctca tcgcggcctt
     5581 gacctgctcc acgtcgtccc ggatccgctc gaccgccggc tccatcccgc tcagctcctt
     5641 cacctggccc tgcaccttct tggtccaggt gtcggtgttg gtgagccagg tctccacctc
     5701 gccgtgggtc tcgcgcagcc gggtcatctc ctcgtacgcg acccgcatct gctccagacc
     5761 gtccgccatc atctcccgga tgcccttgag cgagccgagg tccttgaccg cggcctcgat
     5821 gccggggcgc agctcctcga tccgctgcat ccggccggcc acctcggagg cgacgccgtc
     5881 gagccggccg acctcctgcc ggagctggga gatcttctgc tcctcctcca acagccggcc
     5941 cagctccgcg gccagctcgg ccgcctgctc gcccgcgctc cggatctgcg cggtgaccgc
     6001 cgcggtgccc tggctcgcgg cgtcgagcac cgcgaaccgg ctctcgcact ccttgaccgc
     6061 gttccggagg tcggccaccc gctcgctcac cgcgtgcagg ccccggttct ccagctcgaa
     6121 gctctcgctg ctcttccgca tctgctcccg gagatcgttg agcgactgcc gggcggcctg
     6181 ctgcgcctcc tcggtcaggg tcgccatctg ctgcagctcc tccgaccgcg acatcacctt
     6241 gccctgcacc gcctggacct cggcgatctt ggcctcgatc gcgccgaagc gacggatctg
     6301 ctcctcctgc cggcggagcc aggcatccag ctcccggtcg aggcgggtga gctggctgat
     6361 ctgggtcgcc gcgcggtcca ccgcctcacg ctgctgctcc agtgcggccg acttctgggc
     6421 cacctggtcg gcgagcgcct tgagcaccgc gagccggtgc tgcacgtcgg gcaccgcgga
     6481 gaccgcctgg cccacgggct cgagcgcacg ctccaccgcc tgcacccggc ggccgacctc
     6541 gtccagccgg ccggtgaccg tctggtactc ctcgttgaag tgctccagcc gcgccgtgct
     6601 gtgccggtgc gcgcgcagcg cgtcgtcggc ctgggtccgc atacgggtga cgtcctcgcc
     6661 catctcgtcg agctgcttgc ggagaccctc ggcgtcggtc cggacggtgc cgatggggcc
     6721 ctcgaggctg aggaagccct cgatctgctc gcggagcttg agggccgcgt cgatcttgtg
     6781 gccgaactca ccgaggcgcc cgtggagctg gtcgatctcg gctccggcac cggcgacccg
     6841 ctggacctgg gcttccgcgg ccgcgatgcg cgcctgggtg ccctccatct cggccacctt
     6901 ctgctcgacc gcctcgcacc gctcgcgaag ggtgttgatg tcctcggagc gctccagaac
     6961 cgacgtcaga gcacgcagct gctcgagcgc ctgctcggcg cgggcgacga gcgtttcgag
     7021 ggcgagggtg acgtgcgccc cgctggaatc gacggcgacc actccgtcgt ccgtgcggcg
     7081 gcggcctttg aggaaggaga ccatggcatt gctccgaggg cgaggcactt tggcgatgga
     7141 acgcgagaga gtgagggaac cgtgcagata tgtgcaacgg atatgcccgg agcagtgcga
     7201 ggttgtagga cctgatccac cgcctgaggt catggcacgc aacactttga cggtagagga
     7261 gatcgccgcg gccagccaaa cggggctc
//
LOCUS       DASUYN010000573         7774 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_403535, whole genome shotgun sequence.
ACCESSION   DASUYN010000573 DASUYN010000000
VERSION     DASUYN010000573.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7774)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7774)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7774
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_403535"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..643)
                     /gene="rplE"
                     /locus_tag="VF061_11180"
     CDS             complement(<1..643)
                     /gene="rplE"
                     /locus_tag="VF061_11180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003638072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HEX6670116.1"
                     /translation="MADDKAKAAKPAKGQPQGGQGKGGQGGGKRDKAAAGNLDHAPKA
                     REGAPRLQAHYEQTVRGRLAKEFGLANPNQVPRLEKIVLNVGMGDASKNPKQLESAVE
                     ELSAITGQKAVVTRAKKAIANFNLRAGMPVGAFVTLRGARMYEFLDRFITLAIPRIRD
                     FRGLPSRSFDGRGNYTFGIREQMIFPEIDYDKVEKIHGMDITIVTSTDRDDLAM"
     gene            complement(645..1025)
                     /gene="rplX"
                     /locus_tag="VF061_11185"
     CDS             complement(645..1025)
                     /gene="rplX"
                     /locus_tag="VF061_11185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HEX6670117.1"
                     /translation="MKPLVYKKAKRVRRKAPVRQRLHITKGDTVQVISGDDKGKQGKV
                     LEVFPKTGRIKIQGVNIVTRHLRASPTAEGGKVTREAPIHHSKAMLVDPSSGEPTRVR
                     RRVDADGTVERIAVKSDQPIPRSR"
     gene            complement(1027..1395)
                     /gene="rplN"
                     /locus_tag="VF061_11190"
     CDS             complement(1027..1395)
                     /gene="rplN"
                     /locus_tag="VF061_11190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002460061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HEX6670118.1"
                     /translation="MVQQESILRIADNSGARRALVIRVLGGSKRRYAGLGDTVVVAIK
                     DAIPTGQVKKGDVAKAVIVRTAKETRRKDGSYIRFDENAAVLINDAGEPRATRIFGPV
                     ARELREKRYMKIVSLAPEVL"
     gene            complement(1398..1676)
                     /gene="rpsQ"
                     /locus_tag="VF061_11195"
     CDS             complement(1398..1676)
                     /gene="rpsQ"
                     /locus_tag="VF061_11195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003022794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HEX6670119.1"
                     /translation="MADQAKVERTRRKLRTGTVTSDKMDKTVTVSLVRRYAHPVYGKQ
                     VTRTKKVKARNLEGDAAAKAGDVVRLMETRPLAKTVRWRVTDVVERAK"
     gene            complement(1669..1863)
                     /gene="rpmC"
                     /locus_tag="VF061_11200"
     CDS             complement(1669..1863)
                     /gene="rpmC"
                     /locus_tag="VF061_11200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HEX6670120.1"
                     /translation="MKPDEIREMSVEDLRAKIDELTRERFNLRFRSATESIENPMRFR
                     SLRRDIARMQTILREKEANG"
     gene            complement(1867..2280)
                     /gene="rplP"
                     /locus_tag="VF061_11205"
     CDS             complement(1867..2280)
                     /gene="rplP"
                     /locus_tag="VF061_11205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001829782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HEX6670121.1"
                     /translation="MLAPKRIKFRKTFKGRTKGIAARGNSVSFGEFGLMSLDPGWITN
                     RQIEASRVAMTREMKRGGKVWIRIFPDKPITKKPAETRMGKGKGNPEGWVAVVKPGRV
                     MFEIEGISEDLAKKALALAAAKLPVKTRFVKREES"
     gene            complement(2286..2945)
                     /gene="rpsC"
                     /locus_tag="VF061_11210"
     CDS             complement(2286..2945)
                     /gene="rpsC"
                     /locus_tag="VF061_11210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HEX6670122.1"
                     /translation="MGQKTHPIGLRLGIVRQPSSRWFATKDMPALLKEDELIRKYLKQ
                     RLGHAAIAQIDIERRPGKVTITVHTGRPGVVIGKRGAEVDKLRDELAQLTGKEAAINV
                     EEIKRPELSAQLVGDNIAHQLTQRISFRRAMKRAVQSAMRMGAQGIKVRAAGRLGGAE
                     IARTEGYHEGRVPLHTLRADIDYATSTAKTTYGTIGIKVWIFKGEVIEDVSGRTYSTG
                     A"
     gene            complement(2945..3301)
                     /gene="rplV"
                     /locus_tag="VF061_11215"
     CDS             complement(2945..3301)
                     /gene="rplV"
                     /locus_tag="VF061_11215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010896322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HEX6670123.1"
                     /translation="MSGHAIQRLVRQSPRKMRLVVDLIRGKDVNEAYAILKFNKKLAA
                     KQIAKTLKSAVANAEQKALKDNERFDPDALVVTKAIVNGGTPLKRFTAAAQGRASPIR
                     KRTSHVEIHVDTRESE"
     gene            complement(3304..3594)
                     /gene="rpsS"
                     /locus_tag="VF061_11220"
     CDS             complement(3304..3594)
                     /gene="rpsS"
                     /locus_tag="VF061_11220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009001861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HEX6670124.1"
                     /translation="MARSVKKGPFVQDALMLKVQILNSKNEKRVVKTWSRASTILPEF
                     VGHTFAVHNGNKFVPVYVTENMVGHKLGEFAPTRLFRGHSGKMVADKKAKPE"
     gene            complement(3598..4437)
                     /gene="rplB"
                     /locus_tag="VF061_11225"
     CDS             complement(3598..4437)
                     /gene="rplB"
                     /locus_tag="VF061_11225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HEX6670125.1"
                     /translation="MSIRQFRPMTAGTRFRSVSGFDEITRDTPEKSLLEPMKKSGGRN
                     NLGHLTSRHRGGGHKRQYRKIDFKRNKFGIPGRVAEIEYDPNRTARIALVVYADGEKR
                     YILHPKGVSQGDTVVSGPGSDARTGNALPLSEIPLGTNVHNIELKIGKGGQLCRTAGS
                     SAQVVAKEGEYVTLRLRSTEMRLVHGRCLATIGEVGNAEHELLSVGKAGKSRWLGKRP
                     KVRGVAMNPVDHPLGGGEGKSSGGRPPVSPWGKPEGRKTRHRKKASTKLIVRGRKRGK
                     ATR"
     gene            complement(4439..4726)
                     /gene="rplW"
                     /locus_tag="VF061_11230"
     CDS             complement(4439..4726)
                     /gene="rplW"
                     /locus_tag="VF061_11230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HEX6670126.1"
                     /translation="MPALHQIVVRPVVTEKSSAAYQTRREYAFEVHPEANKYQIRDAL
                     QKLFGVTVTDVRTMQMRRHAVTRGRTRGTTARWKKAIVTLKDGDSIAVFEG"
     gene            complement(4726..5622)
                     /gene="rplD"
                     /locus_tag="VF061_11235"
     CDS             complement(4726..5622)
                     /gene="rplD"
                     /locus_tag="VF061_11235"
                     /inference="COORDINATES: protein motif:HMM:TIGR03953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HEX6670127.1"
                     /translation="MIEAPHYTPAGAKRDAAFALPAEYYDGTVNEPVLHQAVKVFLNN
                     QRQGTAATKTRSFVSGGNQKPWKQKGTGRARQGSTRAPHWRGGGTVFGPHPRDYRTEI
                     PRKVKQLARKSALNARAREGALHVIERFAFRRPRTAQLAGLLDSLGLDGRKVLVLTAN
                     GDPNVYLSGRNLPAVEVMPYPQASAYDVLWAEAVVVEEGALTGVMPEPLPDEPEAEEA
                     EAPRKRARAARPTTAKPKPAPSRSEGAAKAAKGKKAAKKAARSERSATKAAKKPAKKS
                     ATKAAKKPAPKKKPAPKKKGKK"
     gene            complement(5615..6238)
                     /gene="rplC"
                     /locus_tag="VF061_11240"
     CDS             complement(5615..6238)
                     /gene="rplC"
                     /locus_tag="VF061_11240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014224895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HEX6670128.1"
                     /translation="MTSGLIGRKLGMTRVFSEDGTAVPVTVIEAGPCRVVQVREGGVQ
                     LGFGARRKQRATRAELGHAKKAGLDVAPQVLRVFAVNGDAPEPGAEVKVDIFAPGERV
                     KVTGTTKGRGFQGVVHRYGFGGGPATHGNTRHRKPGSISPGTDPSRVIKGKRMPGHMG
                     AARHTELGLTVVKVDAERNLLFVRGAIPGARNGIVTVAKQGGPSRHD"
     gene            complement(6241..6549)
                     /gene="rpsJ"
                     /locus_tag="VF061_11245"
     CDS             complement(6241..6549)
                     /gene="rpsJ"
                     /locus_tag="VF061_11245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HEX6670129.1"
                     /translation="MAQRIRIRLKAFDHVVLDQAAADIVRTAEKTGAQVSGPIPLPVK
                     TERWTVLRSPHIDKKSREQFELRTHKRLLDINDSRPQTMDALTKLDLPAGVDVEIKVE
                     "
     gene            complement(6562..7755)
                     /gene="tuf"
                     /locus_tag="VF061_11250"
     CDS             complement(6562..7755)
                     /gene="tuf"
                     /locus_tag="VF061_11250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001040566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HEX6670130.1"
                     /translation="MAKAKFERTKPHVNVGTIGHVDHGKTTLTAAITAIQAKKGMAQF
                     TAYDQIDKAPEERERGITIATAHVEYESDKRHYAHVDCPGHADYVKNMITGAAQMDGA
                     ILVVSAADGPMPQTREHILLAKQVNVPYIVVFMNKVDMVDDPELLELVELEVRELLSS
                     YDFPGDDTPIIKGSALKALESGDPNSEQGKVIQELLDALDSYIPQPKREIDKPFLMPV
                     EDVFSITGRGTVATGRIERGVVKVGEEVALVGFGASKKTVVTGVEMFRKLLDQGEAGD
                     NVGLLLRGIEKNEIERGMVLAKPGSITPHTHFEAEVYVLTKEEGGRHTPFFKGYRPQF
                     YFRTTDVTGSVELPAGVEMVMPGDNVQMTIELITPIAMDEGLRFAIREGGRTVGAGVV
                     TKILK"
BASE COUNT          907 a         2910 c         2447 g         1510 t
ORIGIN      
        1 ccatcgccag atcgtcgcgg tcggtggacg tcacgatggt gatgtccatc ccgtgaatct
       61 tctccacctt gtcgtagtcg atctcgggga agatcatctg ctcccggatc ccgaaggtgt
      121 agttcccccg cccgtcgaag ctccggctgg gcagcccgcg gaagtcgcgg atgcggggaa
      181 tcgccagggt gatgaaccgg tccaggaact cgtacatcct ggcgccgcgg agcgtcacga
      241 aggcacccac cggcatcccg gcccggaggt tgaagttcgc gatcgccttc ttggcccggg
      301 tgacgaccgc cttctgcccg gtgatggcgc tcagctcctc caccgccgac tcgagctgct
      361 tcgggttctt gctcgcgtcg cccatgccca cgttgagcac gatcttctcc agccgcggca
      421 cctggttcgg gttggcgagc ccgaactcct tggccagccg gccccgcacc gtctgctcgt
      481 agtgggcttg cagccggggc gccccctcgc gcgccttggg cgcgtggtcc aggttgccgg
      541 cggctgcctt gtcccgcttg ccgccgccct gaccgccctt gccctggccg ccctgcggct
      601 ggcccttggc gggcttggcc gccttcgcct tgtcgtccgc catcttaccg gctcctgggg
      661 atcggctggt ccgacttcac ggcgatccgc tcgacggtcc cgtcggcgtc cacccgccgg
      721 cgcacgcggg tcggctcgcc gctcgaggga tcgaccagca tcgccttcga gtgatgaatc
      781 ggcgcctccc gcgtcacctt gccgccttcg gcggtcgggc tggcgcgcag gtgcctcgtc
      841 acgatgttca cgccctggat cttgatccgg ccggtcttgg ggaagacctc gagcaccttg
      901 ccctgcttcc ccttgtcgtc gcccgagatc acctggacgg tgtcaccctt ggtgatgtgc
      961 agcctctgtc gcaccggcgc cttgcggcgc acgcgcttgg ccttcttgta caccagcggc
     1021 ttcatgctac agcacctccg gcgcgagcga cacgatcttc atgtagcgct tctcgcgcag
     1081 ctcgcgcgcg accgggccga agatgcgggt ggcccgcggc tctccggcgt cgttgatcag
     1141 gaccgccgcg ttctcgtcga accggatgta ggagccgtcc ttgcgccggg tctccttggc
     1201 cgtccggacg atgaccgcct tggccacgtc gcccttcttc acctgccccg tcgggatcgc
     1261 gtccttgatg gccacgacca cggtgtcgcc caggccggcg tagcggcgct tgctcccgcc
     1321 cagcacccgg atgaccagcg cgcgccgggc ccccgagttg tcggcgatcc ggagaatgga
     1381 ttcctgttgc accatggcta cttggccctc tcgaccacgt cggtgacccg ccagcggacc
     1441 gtcttggcga ggggccgggt ctccatcagc cggaccacgt cgcccgcctt ggcggccgcg
     1501 tccccctcga ggttccgggc cttcaccttc ttggtccggg tgacctgctt cccgtacacc
     1561 gggtgggcat agcgccgcac cagggacacc gtgaccgtct tgtccatctt gtcgctggtc
     1621 accgtcccgg tgcggagctt ccgccgggtg cgctcgacct tcgcctggtc agccattggc
     1681 ttctttctcc cgcaggatcg tctgcatccg cgcgatgtcg cgccggaggg accggaaacg
     1741 catcgggttc tcgatcgact cggtggccga gcggaagcgg aggttgaacc gctcccgggt
     1801 caactcgtcg atcttggccc tgaggtcctc gaccgacatc tccctgatct cgtctggctt
     1861 cacggctcag ctctcctcgc gcttcacgaa ccgggtcttc accggcagct tggccgccgc
     1921 gagggccagc gccttcttgg ccaggtcctc gctgatcccc tcgatctcga acatcacccg
     1981 tcccggcttc accaccgcca cccagccctc ggggttgccc ttccccttcc ccatccgggt
     2041 ctcggccggc ttcttggtga tcggcttgtc cggaaagatc cggatccaca ccttgccgcc
     2101 gcgcttcatc tcgcgggtca tggccacgcg cgaggcctcg atctgccggt tggtgatcca
     2161 gccgggatcc aggctcatca gcccgaactc gccgaaggag accgaattgc cccgggcggc
     2221 gatgcccttg gtccggccct tgaacgtctt cctgaacttg atccgcttcg gtgccagcat
     2281 cggactcagg cccccgtgct gtaggtgcgg ccggacacgt cctcgatcac ctcgcccttg
     2341 aagatccaca ccttgatgcc gatggtgccg taggtggtct tcgcggtgct ggtggcgtag
     2401 tcgatgtcgg cccgcagcgt gtgcagcggc acccggccct cgtggtaccc ctcggtgcgc
     2461 gcgatttcgg cgccgccgag gcggccggcc gcccggacct tgatgccctg ggcgcccatc
     2521 cgcatggcgc tctgcaccgc gcgcttcatc gcccggcgga aggagatccg ctgggtgagc
     2581 tggtgcgcga tgttgtcgcc cacgagctgg gccgagagct cgggccgctt gatctcctcg
     2641 acgttgatcg cggcttcctt cccggtgagc tgggccagct cgtcgcgcag cttgtccacc
     2701 tcggcgcccc gcttgccgat cacgaccccc ggccggccgg tgtgcaccgt gatggtgacc
     2761 ttccccggcc gccgctcgat gtcgatctgc gcgatggcgg cgtggcccag ccgctgcttg
     2821 aggtacttcc ggatcagctc gtcttccttc agcagcgccg gcatgtcctt ggtggcgaac
     2881 caccgggacg acggctgccg gacgatgccg agccggagcc cgatcgggtg cgttttctga
     2941 cccattactc gctctccctg gtgtccacgt ggatctccac gtggctggtg cgcttgcgga
     3001 tcgggctcgc gcggccctgg gccgccgcgg tgaaccgctt gagcggcgtc ccgccgttca
     3061 cgatggcctt ggtcacgacc agcgcgtcgg gatcgaaccg ctcgttgtcc ttcagcgcct
     3121 tctgctccgc gttggcgacc gccgacttga gcgttttggc aatctgcttg gcggcgagct
     3181 tcttgttgaa cttcaggatc gcgtaggcct cgttcacgtc cttgccgcga atgaggtcca
     3241 cgacgagccg catcttccgg ggcgactggc gcaccagccg ctgaatcgca tggccgctca
     3301 tggttactcc ggcttcgcct tcttgtcggc gaccatcttg ccgctgtggc cgcggaagag
     3361 ccgcgtgggc gcgaactcgc ccagcttgtg ccccaccatg ttctcggtca cgtacaccgg
     3421 gacgaacttg ttcccgttgt gcaccgcgaa ggtgtggccc acgaactcgg gcaggatcgt
     3481 gctcgcccgg ctccaggtct tcaccacccg cttctcgttc ttgctgttca ggatctgcac
     3541 cttgagcatc agtgcgtcct ggacgaacgg gcccttcttg acgcttctcg ccatgcctta
     3601 cctcgtcgcc tttccgcgct tgcgcccgcg gacgatcagc ttggtggacg ccttcttccg
     3661 atgacgggtc ttgcggccct cgggcttgcc ccagggggaa accggcggcc ggccgcccga
     3721 gctcttgccc tcgccgccgc ccagcgggtg gtccaccggg ttcatggcga cgccgcggac
     3781 cttgggccgc ttgcccagcc agcgcgactt gcccgccttg cccaccgaca gcagctcgtg
     3841 ctcggcgttg ccgacctccc cgatggtggc gaggcagcgg ccgtgcacca ggcgcatctc
     3901 ggtcgagcgg agccggaggg tgacgtactc gccctccttg gcgacgacct gcgcgctcga
     3961 gcccgcggtg cggcagagct ggccgccctt gccgatcttg agctcgatgt tgtggacgtt
     4021 ggtgcccagg gggatctcgc tcagcgggag cgcgttgccg gtccgggcgt cggagccggg
     4081 gccggagacg acggtgtcac cctggctcac ccccttgggg tgcaggatgt accgcttctc
     4141 gccgtcggcg tagacgacca gggcgatccg cgcggtgcgg ttgggatcgt actcgatctc
     4201 cgcgacccgg cccgggatcc cgaacttgtt ccgcttgaag tcgatcttcc ggtactggcg
     4261 cttgtgcccg ccgccccggt gccgcgacgt caggtggccg aggttgttcc ggccgcccga
     4321 cttcttcatc ggctcgagca gcgacttctc cggggtgtcc cgggtgatct cgtcgaaccc
     4381 ggacacgctg cggaagcggg tgccggccgt catcggccgg aattgtctga tgctcatctc
     4441 agccctcgaa cacggcgatc gagtcgccgt ccttgagcgt gacgatcgcc ttcttccacc
     4501 gcgccgtggt gccgcgggtg cgaccgcggg tgaccgcgtg gcgccgcatc tgcatggtgc
     4561 ggacgtcggt gacggtgacc ccgaacagct tctggagcgc gtcccggatc tggtacttgt
     4621 tggcctccgg gtgcacctcg aacgcgtatt cccgccgcgt ctggtaggcg gccgagctct
     4681 tctcggtcac caccggccgg acgacgatct ggtggagggc gggcatcact tctttccttt
     4741 cttcttcggc gccggcttct tcttcggcgc cggcttcttc gcggccttgg tggcgctctt
     4801 cttcgccggc ttcttggccg ccttggtggc cgaccgctcg ctgcgggcag ccttcttggc
     4861 ggccttcttt cccttggcgg ccttggcggc tccctcgctg cggctcgggg caggcttggg
     4921 cttggccgtg gtcggcctgg ccgcgcgggc ccgcttccgc ggcgcctcgg cctcctcggc
     4981 ctcgggctcg tcgggcagcg gctccggcat caccccggtg agcgcgccct cctccaccac
     5041 cacggcctcc gcccagagga catcgtaggc cgaggcctgc gggtagggca tcacctcgac
     5101 cgcgggaagg ttccgtccgc tcaggtacac gttcgggtcg ccgttggcgg tcaggaccag
     5161 caccttgcgc ccgtcgaggc cgaggctgtc cagcaggccg gcgagctgcg cggtccgggg
     5221 gcggcggaag gcgaaccgct cgatcacgtg gagcgcgccc tcacgggccc gggcgttgag
     5281 cgccgacttc cgcgccagct gcttcacctt gcgcgggatc tcggtgcggt agtcgcgcgg
     5341 gtgcggcccg aagaccgtgc cgccgccccg ccagtgcggc gcgcgggtgg agccctgccg
     5401 cgcccggccg gtgcccttct gcttccaggg cttctggttg ccgccggaga cgaagctccg
     5461 ggtcttggtg gccgcggtgc cctggcgctg gttgttcagg aacaccttga ccgcctggtg
     5521 cagcaccggc tcgttcaccg tgccgtcgta gtactcggcc ggcagcgcga acgcggcgtc
     5581 gcgcttcgcg ccggccgggg tgtagtgtgg cgcctcaatc atgacggctc ggtcctccct
     5641 gcttcgccac ggtgacgatc ccgttcctgg cgcccgggat ggcgccccgg acgaacagca
     5701 gattgcgctc ggcgtccacc ttcaccacgg tgagccccag ctcggtgtga cgcgcggcgc
     5761 ccatgtgccc cggcatccgc ttgcccttga tgacccgcga cgggtcggtg cccggactga
     5821 tcgagccggg cttccggtgc cgggtgttgc cgtgggtcgc ggggccgccg ccgaacccgt
     5881 agcggtgcac cacgccctgg aacccgcgcc ccttggtcgt gccggtgacc ttcacccgct
     5941 cgcccggcgc gaagatgtcc accttgacct cggcccccgg ctccggggca tcaccgttca
     6001 ccgcgaagac ccgcaggacc tgcggcgcca cgtcgagccc cgccttcttc gcgtggccca
     6061 gctccgcccg ggtggcccgc tgcttccgcc gcgcgccgaa gccgagctgc acgccgccct
     6121 cgcgcacctg caccacgcgg cagggacccg cctcgatgac ggtgaccggc accgcggtgc
     6181 cgtcctccga gaacacccgg gtcatcccga gcttgcgtcc gatcagtccg ctggtcatcg
     6241 ctattcgacc ttgatctcga cgtccacgcc cgccggcagg tcgagcttgg tcagcgcgtc
     6301 catggtctgg ggacgggagt cgttgatgtc gaggagccgc ttgtgggtgc gcagctcgaa
     6361 ctgctcacgg ctcttcttgt cgatgtgcgg gctccgcagc accgtccacc gctcggtctt
     6421 gaccggcagg gggatgggcc cggagacctg cgcgccggtc ttctcggccg tgcgcacgat
     6481 gtccgccgcg gcctggtcga ggacgacgtg gtcgaacgcc ttgaggcgga ttcggattct
     6541 ctgcgccatt gaaactcctc gttacttcag gatcttggtc accacgccgg cgcccaccgt
     6601 ccgcccgccc tcgcggatcg cgaagcgcag cccctcgtcc atcgcgatcg gcgtgatcag
     6661 ctcgatcgtc atctgcacgt tgtcccccgg catcaccatc tccacccccg ccggcagctc
     6721 cacgctcccc gtcacgtccg tcgtccggaa gtagaactgc ggccggtacc ccttgaagaa
     6781 cggcgtgtgc cgccccccct cttccttcgt cagcacgtac acctccgcct cgaagtgcgt
     6841 gtgcggcgtg atcgagcccg gcttcgccag caccatcccc cgctcgatct cgttcttctc
     6901 gatgccccgc agcagcagcc ccacgttgtc ccccgcctcc ccctggtcca gcagcttgcg
     6961 gaacatctcc acccccgtca ccaccgtctt cttgctcgcc ccgaacccca ccagcgccac
     7021 ctcctccccc accttcacca ccccccgctc gatccgcccc gtcgccaccg tcccccgccc
     7081 cgtgatcgag aacacgtcct ccaccggcat caggaacggc ttgtcgatct cccgcttcgg
     7141 ctgcgggatg tagctgtcca acgcgtccaa cagctcctgg atcaccttcc cctgctccga
     7201 attggggtcc ccgctctcca gcgccttcag cgccgagccc ttgatgatcg gcgtgtcgtc
     7261 ccccgggaag tcgtagctcg acagcagctc ccgcacctcc agctccacca gctccaggag
     7321 ctccgggtcg tccaccatgt ccaccttgtt catgaacacc acgatgtagg gcacgttcac
     7381 ctgcttcgcc agcagaatgt gctcccgcgt ctgcggcatc ggcccgtccg ccgcgctcac
     7441 caccaggatc gccccgtcca tctgcgccgc ccccgtgatc atgttcttca cgtagtcggc
     7501 gtgccccgga cagtccacgt gcgcgtagtg ccgcttgtcg ctctcgtact ccacgtgcgc
     7561 cgtcgcgatc gtgatccccc gctcccgctc ctccggcgcc ttgtcgatct ggtcgtaggc
     7621 cgtgaactgc gccatcccct tcttcgcctg gatcgccgtg atcgccgccg tcagcgtggt
     7681 cttcccgtgg tccacgtgcc cgatcgtccc cacgttcaca tgcggcttcg tccgctcgaa
     7741 tttggccttc gccatgtcgg tcttccggtg tccg
//
LOCUS       DASUYN010000574         5548 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_180604, whole genome shotgun sequence.
ACCESSION   DASUYN010000574 DASUYN010000000
VERSION     DASUYN010000574.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5548)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5548)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5548
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_180604"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..381
                     /locus_tag="VF061_11255"
     CDS             <1..381
                     /locus_tag="VF061_11255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670131.1"
                     /translation="ELLLVGGAVLVGVVGLVLGYRTTLARRIPTAREAPEDAGLARVL
                     NRKYYVDEIYDAAIVRPLVRLSRTVLWKGVDQGVIDGAAVNGTARVSRGLGWLGSRLQ
                     TGQVGVYVVLFLVGALWILRAVIR"
     gene            386..1948
                     /locus_tag="VF061_11260"
     CDS             386..1948
                     /locus_tag="VF061_11260"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HEX6670132.1"
                     /translation="MTEFLDSIGYGQWILHALVVLPLLGVVPVLLGPEASAKWTALLV
                     TTVEFVLSLGLWWALDPSRGTLQLVSNTPWIPNWGISYRVGIDGISLVMVLLTTLLLP
                     ISVLGSWRYITRQERGFYALMLTLLTGLVGVFIALDLFVFYVFFEVMLIPMYFIIGIW
                     GGANRLYAAIKFFIYTMAGSLLMLVAIVALVWRIRSVTGYMSFSYDILLQHAGAVGAL
                     APWLFAAFAIAFAIKVPIFPFHTWLPDAHVEAPTAGSVLLAAVMLKIGTYGFIRFAVP
                     FFPEVALSPTVSTIVVVLAVIGIIYGALVAMVQPDIKKLVAYSSVSHLGFVMLGIWGG
                     TLQSVQGSLMIMISHGFSTGALFLLIGMIYERRHTRLIADYGGIARVVPVFSLILTVV
                     ALSSIGLPGLNGFIGEFLVLLGSFGAFPVATVIATTGVIFAAAYLLWALQRMIFNRLD
                     QPENERLTDLDGRELALMAPLLIGIVWLGLYPAPVLHRMESATRRYVQLTQPARTADP
                     VAVQRATVKVAP"
     gene            1945..3447
                     /locus_tag="VF061_11265"
     CDS             1945..3447
                     /locus_tag="VF061_11265"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit N"
                     /protein_id="HEX6670133.1"
                     /translation="MTPIDLGSPLGVAVALLPEIILTGWALIVLLVVSWRHRTAQDSR
                     LAGWLSLAGLLVTGAALAALWVGKAVPEGLPQMVALDPYRYGASALAVLAAAGTVLLS
                     LGYLERERLLAPEYYPLVLLATAGMMFLAGAEDLIVLFLGLEIMSVAVYVLAGFNRAD
                     PFSSEAALKYFLIGAFASGFLLYGIALVYGVAGTTNLALIGAQLAGRPMPLMGALGLG
                     LLLIGMAFKISAVPFHMWAPDVYDGSPTPVTGFMATGVKAAAFAALVRLLMEAFPSAI
                     ALWQPVLAALAIASMVVGNLIALAQRSLKRMLAYSSIAHAGYMLVAAWTGTPEGAGAV
                     LFYLLAYGLTTLASFGFLTALGRGGERDITYDDLAGLAPSRPWIALGLSACMLSLLGF
                     PGTVGFMGKWYILTATVAEGQMILPVILVLTSVLSAGYYLPVIMAMYMRPAPAAERHA
                     GVGLSPTAAGVITVSVVAVILFGFWPNVLLDLATSSARTLTQTALPMAGR"
     gene            3474..4844
                     /locus_tag="VF061_11270"
     CDS             3474..4844
                     /locus_tag="VF061_11270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HEX6670134.1"
                     /translation="MNVPKTIFRQYDVRGLVDSQLTPDLARALGRAFASVAWERLGRA
                     PVLAVGRDNRPSGPALSQGVRLGIADAGGTAVDVGTLPTPALYFAVSALETDGGVQVT
                     GSHNPPEFNGFKMVLGDEAFHGDEILGLWEIIVAERWRSGKGGETTDNSVLRRYREGI
                     VARHKLARPVQVVADCGNGVGSVIAVSTLQALGAEVTPLFCDSDGSFPNHHPDPTVPE
                     NLKDLQEAVRRTGAELGIAFDGDADRIGAVDETGEIIWGDQLLVILGRDAVRRYGPGT
                     PVIFDVKCSEVLPTALRQAGAEPVMWKTGHSLIKAKMKELKAPLAGEMSGHMFFGGDY
                     LGFDDAIFAAARLLEIVSGRPFGLATHLADLPKTFTTPEIRVDAPEEEKFAIVERAAA
                     HFAARYPVNTIDGVRITFPQGWGLLRASNTQAILVLRFEATDPAALDAYRGEVAGWLA
                     GQGVRV"
     gene            4848..>5548
                     /locus_tag="VF061_11275"
     CDS             4848..>5548
                     /locus_tag="VF061_11275"
                     /inference="COORDINATES: protein motif:HMM:NF015644.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0182 family protein"
                     /protein_id="HEX6670135.1"
                     /translation="MNRRGRRLIAAIAGVVTVLFAGRWAAGLLTDRWWAAQISPAAVG
                     FVTDWHVLRLTLDLAGFLLAAAWFIGHLLVVYRAVGSVQVRRHVANLEFREALTPGIL
                     LAVAVGAGALLGLLVGTGGAERWQQVALAWQGVTYGMTDPLLNKDAGLYVAQLPVWRL
                     AHGFALLLVVLALGIVFALYALMGAVRWMEGRPAINDHARSHLGWLLTALALCLVWGY
                     VLEPYELVAGLGGPL"
BASE COUNT          679 a         1954 c         1931 g          984 t
ORIGIN      
        1 gagctcctcc tggtgggcgg cgcggtgctg gtcggcgtgg tcgggctggt cctgggctac
       61 cggacgacgc tggcgcgccg gattccaacg gcgcgggaag caccggagga cgccggcctg
      121 gcccgggtgc tgaaccgcaa gtactacgtc gacgagatct acgacgcggc gatcgtgcga
      181 ccgctcgtcc gcctctcccg caccgtgctc tggaagggcg tggaccaggg ggtcatcgac
      241 ggcgcggcgg tcaacggtac cgcgcgggtg tcgcgcggcc tcggctggct gggcagccgg
      301 ctgcagacgg gacaggtggg ggtgtacgtg gtgctcttcc tcgtcggcgc gttgtggatc
      361 ctgcgcgccg tgatccggtg acgcgatgac cgagttcctc gactcgatcg gctatgggca
      421 gtggatcctc cacgccctgg tcgtgctccc gctgctcggc gtcgtgccgg tcctgctggg
      481 accggaggcg tcggccaagt ggaccgccct cctcgtgacc accgtggagt tcgtactctc
      541 gctgggcctc tggtgggcgc tcgatccctc ccgggggacc ctgcagctgg tgtccaacac
      601 cccgtggatc cccaactggg gcatcagcta ccgggtcggc atcgacggga tctccctggt
      661 catggtgctg ctgacgaccc tgctgctccc gatcagcgtg ctggggagct ggcgctacat
      721 cacccggcag gagcgcggct tctacgcctt gatgctgacc ttgctgacgg gactggtcgg
      781 ggtgttcatc gcgctcgacc tgttcgtctt ctacgtcttc ttcgaggtca tgctcatccc
      841 gatgtacttc atcatcggga tctggggcgg ggccaatcgg ctgtacgcgg cgatcaagtt
      901 cttcatctac accatggccg gctcgctgct catgctggtg gcgatcgtgg ccctggtgtg
      961 gcggatccgg tcggtcacgg gctatatgtc gttctcgtac gacatcctgc tccagcatgc
     1021 cggagcggtc ggcgccctcg cgccctggct cttcgcggcg ttcgccatcg ccttcgccat
     1081 caaggtgccg atcttcccct tccacacctg gctgccggac gcgcacgtcg aggcgccgac
     1141 cgcgggcagc gtcctgctgg cggccgtgat gctcaagatc ggcacctacg gcttcatccg
     1201 attcgccgtg ccgttcttcc ccgaggtggc gctgagtccg accgtcagca ccatcgtcgt
     1261 ggtgctcgcg gtcatcggca tcatctacgg cgcgctggtg gccatggtgc agccggacat
     1321 caagaagctg gtggcctact cctcggtgag ccacctgggc ttcgtgatgc tgggaatctg
     1381 gggcggaacc ctgcagagcg tgcagggctc gctgatgatc atgatcagcc acggcttttc
     1441 caccggggcg ctgttcctcc tgatcggcat gatctacgag cgccggcaca cccggctcat
     1501 cgccgactac ggcggcatcg cccgcgtggt cccggtgttc agcctgatcc tcaccgtggt
     1561 ggcgctctcc tcgatcgggc tgcccggact gaacggattc atcggggagt tcctggtgct
     1621 gctcggcagc ttcggcgcct tccccgtggc cacggtcatc gccacgaccg gcgtgatctt
     1681 cgccgcggcc tacctcctct gggcgctgca gcggatgatc ttcaaccgac tggaccagcc
     1741 ggagaacgag cggctcaccg acctcgacgg ccgtgagctc gcgctgatgg cgccactctt
     1801 gatcggcatc gtgtggctgg gcctctaccc ggcgccggtg ctccaccgca tggagtcggc
     1861 cacgcgccgc tacgtgcagc tcacccagcc ggcccgcacg gcggacccgg tggcggtgca
     1921 gcgcgccacc gtgaaggtgg ccccatgacc ccgatcgacc tggggagccc gctcggcgtc
     1981 gcggtcgccc tgctgcccga gatcatcctc acgggctggg cgctgatcgt gctgctggtg
     2041 gtgagctggc ggcaccggac ggcacaggac agccggctgg ccggatggct ctccctcgcg
     2101 gggctcctgg tgacgggcgc cgcgctggcc gcgctgtggg tggggaaggc ggtgccggag
     2161 ggtctgcccc agatggtcgc gctcgacccc taccgctacg gcgcctccgc cctcgccgtg
     2221 ctcgcggccg cgggcaccgt gttgctctcg ctgggctacc tcgagcgcga gcggctcctc
     2281 gcgccggagt actatccgct ggtcctgctc gccaccgccg ggatgatgtt cctggccggc
     2341 gcggaggacc tgatcgtcct cttcctcggc ctcgagatca tgtcggtggc ggtgtacgtc
     2401 ctggcggggt tcaaccgcgc cgaccccttt tcctcggagg cggcgctcaa gtacttcctc
     2461 atcggtgcct tcgcctccgg gttcctgctc tacggcatcg cgctggtgta tggtgtggcg
     2521 gggacgacca acctcgccct gatcggggcg cagctcgccg gccggcccat gccgctgatg
     2581 ggcgcgctgg gcctcgggct gctgctcatc ggcatggcct tcaagatctc cgcggtgccc
     2641 tttcacatgt gggcgcccga cgtctacgac ggctctccga cgcccgtcac cggcttcatg
     2701 gcgaccgggg tgaaggccgc cgcgtttgcc gccctggtgc ggctcctgat ggaggccttc
     2761 ccatcggcga tcgcgctgtg gcagccggtg ctggccgcgc tggcgatcgc ctcgatggtg
     2821 gtcggcaatc tcatcgcgct ggcgcagcgg tcactcaagc gcatgctcgc ctacagctcg
     2881 atcgcccacg cgggctacat gctggtggcc gcctggaccg gcacgccgga aggggcgggc
     2941 gcggtgctgt tctacctgct cgcctatggg ctcaccaccc tcgcgagctt cggcttcctc
     3001 acggcgctgg gacggggcgg cgagcgggac atcacctacg acgacctcgc cggcctggcg
     3061 ccgagccggc cgtggatcgc gctcgggctc agcgcctgca tgctgtcgtt gctcggcttc
     3121 cccgggacgg tggggttcat gggcaagtgg tacatcctca cggccacggt ggccgagggg
     3181 cagatgatcc tgccggtcat cctggtgctc accagtgtcc tgtcggccgg ctactacctg
     3241 ccggtcatca tggccatgta catgcggccc gcgcccgcgg cggagcgcca cgccggcgtc
     3301 ggtctcagcc ccacggccgc gggggtcatc acggtctcgg tcgtggccgt gatcctcttc
     3361 ggtttctggc ccaacgtcct gctggacctg gccacctcga gcgcgcgcac gctgacccag
     3421 accgccctgc cgatggcggg ccggtgaccc ccacggcacc gggagaagct tcgatgaacg
     3481 ttcccaagac catctttcgc cagtacgacg tccgcgggct ggtggacagc cagctgacgc
     3541 cggacctcgc ccgggcgctg ggccgcgcct tcgcgtccgt ggcgtgggaa cgactcggcc
     3601 gggcgccggt gctcgccgtc ggtcgggaca accggccgtc ggggccggcg ctctcgcagg
     3661 gcgtgcggct cgggatcgcc gacgcgggcg gcaccgcagt ggatgtgggc accctgccca
     3721 ccccggcact gtacttcgcc gtctcggcgc tggagaccga cggcggcgtg caggtcacgg
     3781 gctcccacaa tccgcccgag ttcaacggct tcaagatggt tctcggggat gaggcgttcc
     3841 acggcgacga gatcctggga ctgtgggaga tcatcgtcgc cgagcgctgg cgcagcggca
     3901 agggcggcga gaccacggac aattcggtgc tccggcgcta ccgcgagggc atcgtcgccc
     3961 ggcacaagct ggcgcggccg gtgcaagtcg ttgccgactg cggcaacggg gtcggcagcg
     4021 tcatcgccgt gtccaccctc caggcgctcg gcgcggaagt gacgccgctc ttctgcgact
     4081 ccgacggcag ctttcccaat caccatcccg atccgacggt ccccgagaac ctgaaggacc
     4141 tccaggaagc ggtgcgccgc accggcgcgg agctgggcat cgcgttcgac ggggacgccg
     4201 accggatcgg tgcggtggac gagaccgggg agatcatctg gggcgaccag ctcctggtga
     4261 tcctgggccg ggacgcggtc cgccggtatg gccccgggac gcccgtcatc ttcgacgtga
     4321 agtgctccga ggtgctgccc accgcgctgc gccaggccgg ggcggagccg gtgatgtgga
     4381 agaccggcca ctcgctgatc aaggcgaaga tgaaggagct caaggcgccg ctggccggcg
     4441 agatgagcgg ccacatgttc ttcggcggcg actatctcgg cttcgacgac gcgatcttcg
     4501 ccgcggcccg cctgctcgag atcgtgagcg gcaggccgtt cgggctggcc acccacctcg
     4561 ccgacctgcc gaagacgttc accacgccgg agatccgggt ggacgcgccg gaggaggaga
     4621 agttcgccat cgtggaacgc gcggccgcgc acttcgccgc gcgctatccc gtgaacacga
     4681 tcgacggtgt ccgcatcacc ttcccccagg gctggggatt gctccgcgcc tcgaacaccc
     4741 aggccattct ggtgctccgc ttcgaggcca ccgacccggc cgcgctcgac gcctaccgcg
     4801 gcgaggtcgc cggctggctc gccgggcagg gcgtgcgcgt ctagcccgtg aaccgacgcg
     4861 gccgtcggct gatcgccgcg atcgccggcg tcgtcaccgt gctgttcgcg ggtcgctggg
     4921 cggcgggcct gttgaccgac cgttggtggg cggcccaaat ctcccccgcg gccgtcggct
     4981 tcgtcaccga ttggcacgtc ctccgactca cgctcgacct cgccggcttc ctcctcgcgg
     5041 ccgcctggtt catcggacac ctgctcgtgg tctaccgggc cgtgggctcg gtgcaggtcc
     5101 gccgtcacgt ggccaacctc gagtttcgcg aggcgctcac ccccgggatc cttctcgcgg
     5161 tggcggtggg ggccggggcg ctgctcggtc tgctggtggg caccggcggc gcggagcggt
     5221 ggcagcaggt cgccctcgcc tggcagggtg tcacgtacgg catgaccgat cccctgctca
     5281 acaaggacgc cggcctctac gtcgcccagc tgccggtctg gcggctggcg cacggctttg
     5341 ccctcctgct ggtggtgctc gccctcggga tcgtgttcgc gctctacgcg ctcatgggcg
     5401 cggtgcgctg gatggagggt cggcccgcga tcaacgatca cgcccgctcc catctcggct
     5461 ggctgttgac cgcgctcgcc ctctgcctgg tctggggata cgtcctcgag ccctacgagc
     5521 tggtggctgg cctcggcgga ccgctcga
//
LOCUS       DASUYN010000575         3287 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_840646, whole genome shotgun sequence.
ACCESSION   DASUYN010000575 DASUYN010000000
VERSION     DASUYN010000575.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3287)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3287)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3287
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_840646"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..252)
                     /locus_tag="VF061_11280"
     CDS             complement(<1..252)
                     /locus_tag="VF061_11280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670136.1"
                     /translation="MPASTLRAIAALTLAVVPAAAGQAPRTGASEGFVVCLGDDTLAV
                     ERYTRSATRLESEIVLRAPAARRVTYRAELDPVGDVTSME"
     gene            complement(332..766)
                     /gene="arfB"
                     /locus_tag="VF061_11285"
     CDS             complement(332..766)
                     /gene="arfB"
                     /locus_tag="VF061_11285"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: protein motif:HMM:NF006718.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003747 - translation release factor
                     activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alternative ribosome rescue aminoacyl-tRNA
                     hydrolase ArfB"
                     /protein_id="HEX6670137.1"
                     /translation="MPDGYLEITPALLLPLGELDVRATRSGGPGGQHVNTSSTRIEIW
                     WDVQSSPTLTDEQRARLLLGLASRLDGEGRLRVVASASRSQLRNREAATERLRELVAA
                     ALVVRKPRKRTKPGRAAKAARLEAKRRRSALKRERRRPRHDD"
     gene            823..1632
                     /gene="larE"
                     /locus_tag="VF061_11290"
     CDS             823..1632
                     /gene="larE"
                     /locus_tag="VF061_11290"
                     /inference="COORDINATES: protein motif:HMM:TIGR00268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent sacrificial sulfur transferase
                     LarE"
                     /protein_id="HEX6670138.1"
                     /translation="MTDLDRLRQHLQGLGKVLLGYSGGVDSALLAVVANQALGARRFL
                     AVIGRSPSYPEAQWRTAVELAGRFGVPLLELDTRELEDPRYLRNDTDRCYFCKAELWN
                     RLGSLARREGFDTVIDGTNADDLGEHRPGLRAGQEGGIRSPLAELGWTKDAVRAASRA
                     LGLPTWDAPAAPCLSSRVRYGLGITPRRLRQVEEGEAYLRAQGVAGDLRVRHHGSHAS
                     VEVAQAEMPMLRSRWEAVERFFAELGFERVELDPEGYRRGRLLGLAPHGVA"
     gene            1632..2186
                     /gene="thpR"
                     /locus_tag="VF061_11295"
     CDS             1632..2186
                     /gene="thpR"
                     /locus_tag="VF061_11295"
                     /inference="COORDINATES: protein motif:HMM:TIGR02258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008664 - 2'-5'-RNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 2',3'-cyclic phosphodiesterase"
                     /protein_id="HEX6670139.1"
                     /translation="MRLFAAVPITEPARGQIAQLLARLREPGWPLRLVHDQGLHLTMK
                     FFGEVPPGRLEVIEEAVRAAVPGTGALSLQLAGIGAFPSFQRPRIIWVGLDAPPALEL
                     LQDRLERRAEAIGFPLEGTPFRPHVTLARVREGHRLPAGALEGLEGQYESVSFLASEL
                     VLYESVLGRGGPRYEPKLTLELAS"
     gene            2186..2830
                     /locus_tag="VF061_11300"
     CDS             2186..2830
                     /locus_tag="VF061_11300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670140.1"
                     /translation="MGCLTAPFKLLGCLGLLIALGVAWIYRDRLESEARRVIERVQGV
                     VPSSEGRPGVTSLESAEAKVDSLNGWRADSVVLSASEFASLVGSGMDRQFRGQLDSLQ
                     VELLDGEIRVSARLRTAGLSPELMGPLAGALGPTEPVDASGPVRVTRPGAGEWRVRTF
                     RIADFPIPDEMVPRLVGQALGDPRRTAVPVRIPQGIRAIRVRPGSAILYGATRS"
     gene            2827..>3287
                     /locus_tag="VF061_11305"
     CDS             2827..>3287
                     /locus_tag="VF061_11305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX6670141.1"
                     /translation="MSHRVLIVDDEQGIRQALKQVLEYEDLEVRVAASGGEAISLYTE
                     FRPHLVFLDVKMAGLDGLETLTRLRGLDPGPQIVMISGHGTIATAVEATQRGAFDFLE
                     KPLDTDRLLLTVRNALAHAELVGENARLREAAGGRYQMVGDGPALRQVRELV"
BASE COUNT          416 a         1120 c         1229 g          522 t
ORIGIN      
        1 ctccatactc gtcacgtcgc ccaccggatc cagctccgca cgataggtca ctcgccgggc
       61 cgccggggca cgcagcacga tctcgctctc gagcctggtg gccgaccggg tgtagcgctc
      121 gacggcgaga gtgtcgtcgc ccagacagac gacgaagccc tcgctcgccc cggtgcgcgg
      181 ggcctgtcct gccgccgcgg gcacgacggc aagggtgaga gcggcgatgg cgcgcaaggt
      241 cgaggcgggc atgcgggccg ccggtggggg tgagcgtgga gtgtgggtcc gtcccctcta
      301 cggccgctgg accgagcggg tttcctgcgt ctcagtcgtc gtgtcggggc cgccgccgct
      361 cgcgtttcag agcggagcgc cgtcgcttgg cctccagccg cgccgccttc gcggcccgcc
      421 cgggcttggt gcgcttgcgc ggcttgcgta ctaccagggc ggcggcgacc agctcgcgca
      481 accgctcggt ggcggcctcc cggttccgga gctgactgcg cgacgccgag gcgaccaccc
      541 gcagccgacc ctcgccgtcg aggcggctcg ccaggcccag caacaggcgg gcgcgctgct
      601 cgtccgtcag cgtgggagac gattggacgt cccaccagat ctcgatccgg gtggacgagg
      661 tgttgacgtg ctggccgccg ggtccgcccg agcgggtggc gcgaacgtcc agctcgccga
      721 gcgggagcag cagcgcgggt gtgatctcga gatagccgtc gggcacgcag ggaagttagc
      781 gcttcttacg cccggtttct cactggttta cgtttctccc ccatgacgga cctcgatcgc
      841 ctgcggcagc acctgcaggg tctcggcaag gtgcttctgg ggtactcggg cggggtcgac
      901 tcggcgttgc tcgcggtcgt ggcgaaccag gccctgggtg cgagacggtt tctcgccgtc
      961 atcggccgca gtccttccta tcccgaggcc cagtggcgta ccgccgtgga gctggccgga
     1021 cgattcggcg tgccgctgct cgagctggac acccgggagc tcgaggatcc ccgctacctc
     1081 cgcaacgaca ccgaccgttg ctacttctgc aaggcggagc tgtggaaccg cctcgggtcg
     1141 ctggcccgcc gagagggatt cgacaccgtc atcgatggca ccaacgcgga cgatctgggc
     1201 gagcaccggc ccggtctgcg cgccgggcag gagggtggta tccgctcccc cctggccgag
     1261 ctcggttgga ccaaggacgc cgtgcgggcc gcgagccgag cgctgggcct cccgacctgg
     1321 gatgcgccgg cggcgccctg tctctcgagc cgggtgcgct acggcctcgg gatcaccccc
     1381 cgccgcctgc ggcaggtgga ggagggcgag gcgtatcttc gcgcccaggg cgtggcgggc
     1441 gatctccggg tccggcacca tggcagccac gcgagcgtgg aagtggcgca ggcggagatg
     1501 ccgatgctgc gctcgcggtg ggaggcggtg gaacggttct tcgcggaact cggtttcgag
     1561 cgggtagagc tggaccccga gggttaccgg cgcggccggc tcctcgggct ggcgccccat
     1621 ggcgtagcct gatgcggctg tttgcggcgg tcccgatcac cgagcccgcc cgggggcaga
     1681 tcgcacagct gctcgcccgc ctgcgggagc ccgggtggcc gctcaggctg gtacacgacc
     1741 agggtctgca tctcacgatg aagttcttcg gtgaagtgcc cccagggcgg ctcgaggtca
     1801 tcgaagaggc ggtccgcgcc gcggtccccg gcaccggtgc cctttccctg cagctggccg
     1861 gcatcggtgc gtttcccagc ttccagcgcc cgaggatcat ctgggtggga ctcgacgcgc
     1921 ctccggcgct cgagctcctc caggatcggc tggagcgtcg ggcggaggcg atcggctttc
     1981 ccctggaggg tactccgttc cggccccacg tcaccctggc acgggtgcgc gaggggcacc
     2041 ggcttccagc cggggcactc gagggcctgg agggtcagta cgagtcggtg agctttctgg
     2101 cctcggagct ggtgctctac gagagcgtgc tcggccgggg cgggccgcgc tacgagccga
     2161 agctcaccct ggagctcgcc tcgtgatggg ctgtctcacg gcgccgttca agctcctcgg
     2221 ctgcctcggc ctgctgatcg ccctcggtgt cgcctggatc tatcgcgacc ggctggagag
     2281 cgaggcgcgg cgggtgatcg agcgggttca aggtgtcgtt ccctcgagcg agggcaggcc
     2341 gggtgtgact tcgctcgaat cggcggaggc gaaggtggat tcgctcaacg gctggcgggc
     2401 ggactcggtg gtgctctcgg cctcggagtt cgcctcgctg gtggggagtg gaatggatcg
     2461 ccagttccgc ggccagctcg actcgctcca ggtcgagctg ctcgacggcg agatccgggt
     2521 cagcgcgcgg ctccgcaccg ccgggctctc gcccgagctg atgggaccgc tcgccggggc
     2581 gctgggcccc accgagccgg tggacgcgtc ggggcccgta cgggtgacgc gtcccggcgc
     2641 gggggagtgg cgggtgcgca ccttccgcat cgccgacttt cccatccccg atgagatggt
     2701 tccccgtctg gtgggccagg ccctgggcga tccccggcgt acggcggtgc cggtcaggat
     2761 accccagggc atccgcgcga tccgggtccg gcccggcagc gccatcctct acggagcgac
     2821 ccgctcatga gccatcgcgt gctcatcgtg gacgacgagc agggcatccg gcaggccctg
     2881 aagcaggtcc tggagtacga ggatctggag gtgcgggtgg ccgcctcggg cggggaggcc
     2941 atcagcctct acaccgagtt ccgtcctcac ctcgttttcc tcgacgtcaa gatggcgggg
     3001 ctcgatggac tggagacgct gacccggctg cgcggcctcg atcccgggcc tcagatcgtg
     3061 atgatctcgg ggcacgggac catcgccacc gcggtcgagg ccacccagcg cggcgccttc
     3121 gactttctgg agaagccgct cgacaccgac cggctgctgc tcacggtgcg gaacgcgctg
     3181 gcccacgcgg agctggtggg cgagaacgcc cgactgcggg aggctgcagg cggccgctat
     3241 cagatggtgg gggacggtcc ggcgctccgg caggtgcgcg agctggt
//
LOCUS       DASUYN010000576         2550 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1285059, whole genome shotgun sequence.
ACCESSION   DASUYN010000576 DASUYN010000000
VERSION     DASUYN010000576.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2550)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2550)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2550
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1285059"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..472)
                     /locus_tag="VF061_11310"
     CDS             complement(<1..472)
                     /locus_tag="VF061_11310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670142.1"
                     /translation="MIDLRTLGSVDLRTADGREAATVLRQPKRLALLAYLAADLPRRF
                     HRRDSLVALFWPDLDAGHARASLRRSLHFLRQGLGAEVLSSRGDEEVAVPEDALRCDA
                     AELERALAAGNPERALSLYRGPFLDGLHVDGASTQFQEWLDRQREGLRRAAAAAA"
     gene            546..1064
                     /locus_tag="VF061_11315"
     CDS             546..1064
                     /locus_tag="VF061_11315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670143.1"
                     /translation="MRHVALLVLCTNLAMAPALAQGPGERVRLVGLTFDHWRGASGPA
                     LLRPTLRLTTYSRGGPGAEFALVTFPDGISINPPGVVVGLQAGLAQPVHAGPVTFLLK
                     AGGAGIAVAGILPDSRLFRLFPGLQAGLGLLLPVDRKTTLRLDVTRHRYSDWRGGWSF
                     GLGFSGGLRRGR"
     gene            1144..>2550
                     /locus_tag="VF061_11320"
     CDS             1144..>2550
                     /locus_tag="VF061_11320"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HEX6670144.1"
                     /translation="MSFDAIVIGSGFGGAMAARQLVHAGWRVLMLERGGWVERGPQNW
                     AQENVGELTGHYCREASYRQLRGGRDLGAYFCVGGPSVFYGGVSLRFREQDFEVDREI
                     VGDSGARWPLRYADLEPYYATAERILGVSGTAGEDPTEPPRSEPYPFPAADLAPVSER
                     LDRAARSLGLRPFRLPLAINRVAVEGRGACEACGTCDGFACAVGAKNDLPTAVLGPLL
                     KQGLRLETDAVVTRLLTDGRRVTGVEVAGRESGERTVFRAREVVLAAGALATPHLLLA
                     SELPRLNPGGQVIGRYLQRHYNEILFGIFPTPPNPDGGFHKQLGIHDLYFGHPLVPAP
                     AGKLGGMQQLPTPPVGLVRAELPRLVGAMVAPWIKHLTGLLVMAEDQPVYENRVLLDE
                     SAADRYGIPRLLVSHRHTARDRAAGAVLAATAKRILRRAGALACYRHQVATFSHGVGT
                     VRMGSDRYTSALDADCRFR"
BASE COUNT          324 a          953 c          916 g          357 t
ORIGIN      
        1 ccgcggcggc ggccgccgcc cgccgcagac cctcacgctg ccggtccagc cattcctgga
       61 actgggtcga ggccccgtcg acgtggagcc catccaggaa cggcccgcgg tagagggaga
      121 gggcgcgctc cggattgccc gccgcgaggg cccgctccag ctccgccgcg tcgcagcgga
      181 gcgcatcctc cggcaccgcg acctcctcgt cgccccggga cgacaggact tccgcgccga
      241 ggccctggcg gaggaagtgg agggaccggc gcagcgaggc tcgggcgtgt cccgcgtcca
      301 ggtcgggcca gaagagcgcg accaggctgt cgcgccgatg gaagcgccgg ggcaggtcgg
      361 cggcgaggta ggcgaggagc gcgagccgct tgggctggcg cagcacggtg gcggcttcgc
      421 ggccgtccgc ggtgcggagg tccaccgagc cgagggtacg gaggtcgatc atcggaggtg
      481 aggaaaggta acgctcgggg gacggggcgt atccagcgtg gggaagccac agccgagagg
      541 cctccatgcg tcacgtcgcc ctgctggtcc tctgcaccaa tctcgcgatg gcgccggctc
      601 tggcgcaggg tccgggtgag cgggtccggc tggtcggtct caccttcgac cactggcgag
      661 gcgcctccgg ccccgctctc ctccgaccta ccctcaggct caccacctat tcccggggag
      721 ggccgggcgc cgagttcgcc ctggtaacct tccccgacgg catctccatc aaccccccgg
      781 gcgttgtcgt gggcctccag gccggtctgg cccaaccggt ccatgccgga ccagtcacgt
      841 ttctgctcaa ggccggcgga gccggcatcg cagtggccgg aatactcccc gacagccggc
      901 tcttccggct gttccccggc ctccaggccg gcctcggcct cctcttgccc gtggaccgca
      961 agactacgct gcggctcgat gtgacgaggc accggtacag cgactggaga gggggttgga
     1021 gcttcgggtt ggggttctcg ggcgggcttc gtcgcgggcg ctaggccccg ggctcggaga
     1081 ctgctccaaa ggccggtccc ctgctaagtt gcgggccgtg cggacctacc ctgagcccgg
     1141 ctcgtgagct tcgacgcgat cgtcatcggc agcggcttcg gcggcgccat ggccgcgcgc
     1201 cagctggtgc acgccgggtg gcgggtgctc atgctggagc gaggcggctg ggtggagcgg
     1261 gggccccaga actgggccca ggagaatgtc ggtgagctga ccgggcacta ctgccgggaa
     1321 gcctcctatc gccagctccg cggcggccgc gacctcggcg cctacttctg cgtcggaggg
     1381 ccgtcggtct tctacggcgg cgtctccctg cgcttccggg agcaggactt cgaggtggac
     1441 cgcgagatcg tgggcgactc gggggcccgc tggccgctcc gctacgccga cctcgagccc
     1501 tactacgcga cggccgagcg catcctcggc gtctccggca cggcgggcga ggacccgacc
     1561 gagcccccgc ggagcgagcc ctatcccttc ccggccgccg atctcgcccc ggtcagcgag
     1621 cgtctcgacc gcgcggcccg cagcctcggc ctgcgtccgt tccggcttcc gctcgccatc
     1681 aaccgggtgg ccgtcgaggg gcgcggcgcc tgcgaggcct gcggcacgtg cgacgggttc
     1741 gcctgtgccg tcggtgccaa gaacgacctc cccacggcgg tcctcggccc gctgctgaag
     1801 cagggactcc ggctggagac cgacgcggtc gtcacccgac tcctcaccga cggccgacgg
     1861 gtgaccggcg tcgaggtggc cggccgggag tcgggcgagc gcaccgtgtt ccgggcccgg
     1921 gaggtggtcc tggccgccgg ggcgctcgcc accccgcacc tcctgctcgc ctccgagctg
     1981 ccgcggctca atcccggcgg acaggtgatc ggccgctatc tccagcgcca ttacaacgag
     2041 atcctcttcg gcatcttccc cacgccgccc aatcccgacg gcggcttcca caaacagctc
     2101 ggcatccacg acctctattt cgggcacccg ctggtgccgg ccccggctgg aaagctcggc
     2161 gggatgcagc agctccccac gccgccggtc gggctggtcc gcgccgagct gccgcgcctg
     2221 gtcggcgcga tggtggcgcc gtggatcaag cacctcaccg ggctcctggt gatggcggag
     2281 gaccagccgg tgtacgagaa ccgcgtcctg ctcgacgagt ccgccgccga ccgctacggg
     2341 atcccgcgcc tcctcgtcag ccaccggcac accgcgcgcg accgcgccgc gggcgcggtg
     2401 ctggccgcca ccgcgaagcg catcctccgc cgcgcgggcg cgctcgcctg ctaccgccac
     2461 caggtggcga ccttcagcca cggcgtcggg acggtgcgca tgggcagcga tcggtacacg
     2521 agcgcgctcg acgccgactg ccgcttccgg
//
LOCUS       DASUYN010000577         3279 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1725221, whole genome shotgun sequence.
ACCESSION   DASUYN010000577 DASUYN010000000
VERSION     DASUYN010000577.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3279
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1725221"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            28..636
                     /locus_tag="VF061_11325"
     CDS             28..636
                     /locus_tag="VF061_11325"
                     /inference="COORDINATES: protein motif:HMM:NF012784.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S1 RNA-binding domain-containing protein"
                     /protein_id="HEX6670145.1"
                     /translation="MAGTERGITSIQMDIKIEGLDLRIMEQALEKARKGRLHILKEMG
                     KTLPGPRTDLSQYAPRIFTMQIKPDKIGDVIGPKGKTIRGIQDATGAKISIEDTGVVT
                     ISAVGGEAGEKARAMVAAITTEPEVGRTYEGPVKSTTAFGAFVEILPGVEGLLHISEL
                     QHGRTEKTEDVVKKGDIVQVKLLEVDDRGRMKLSRKALLPRE"
     gene            643..1911
                     /locus_tag="VF061_11330"
     CDS             643..1911
                     /locus_tag="VF061_11330"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HEX6670146.1"
                     /translation="METVQLDEGLRRTTAPNGLVVLTEELPGVRSAAVGIYVRTASAH
                     EPRNQLGISHLLEHMVFKGTERRTAQQLALELEIRGGGLDAFTGRDYTSYQAHVLDAD
                     LPLAIEILTDLVRRPLLRESDLEPERNVIHEEINGVADTPDDLVFELHAETLWPEHPY
                     GYSILGTRESLDALSAEDLKVLHRGGYYRGNCVIAAAGHVNHEQLLTVLEREGWFEGV
                     TREPPRGGVVPAPAVRGASRTEERDTAQTHIVFGTDTFPLRDPRRFPLAILTNVFGGG
                     MSSRLFQRVREELGLAYAVFAYKHFYQGSGQLGVYVGTQAATADRAVEAIRVEYGRLA
                     REGLGMAELANGKQQLKGQVMLSLESPAARMGRLAGFILHDDHYRPLDEMLTEIDAVT
                     SDQIVEVAREFFAPERQTVVRLGPDKNGKR"
     gene            2042..3154
                     /gene="ald"
                     /locus_tag="VF061_11335"
     CDS             2042..3154
                     /gene="ald"
                     /locus_tag="VF061_11335"
                     /EC_number="1.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000286 - alanine dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006522 - alanine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine dehydrogenase"
                     /protein_id="HEX6670147.1"
                     /translation="MKIGVPKEIKTNENRIALVPAGAEALVGAGHSVFVEQGAGAGSG
                     FSDDAYRSAGASILPTADEVWGQAEMIMKVKEPIAAEWPRMRRGQLVYTYFHFAAAED
                     LTRAVIDSGAVAIAYETVQLESGELPLLTPMSEVAGRMAVQEGAKYLEKVFGGSGILL
                     GGVPGVAPGEVVIIGGGVVGINAAKMAAGLGAHVTILDISLDRLRYLADVLPANVETV
                     YSNRHNILDAIRRADLVVGAVLLPGAKAPHLVKRADLKVMKPGSVIVDVAVDQGGCVE
                     TIKPTTHENPTYFVDGILHYAVANMPGGVPRTSTLALTNATLPYGLKLAKQGWRAACK
                     SDPALRLGLNVVEGKVVYPGVAEAFRLPLADVNSVV"
BASE COUNT          595 a         1037 c         1102 g          545 t
ORIGIN      
        1 gaccacctcg gcgacatgga cttcaaagtg gccggcaccg agcgtggcat cacctcgatc
       61 cagatggaca tcaagatcga ggggctcgac ctgaggatca tggagcaggc cctggagaag
      121 gcgcgcaagg gccggctgca catcctgaag gagatgggca agacgctgcc gggcccccgc
      181 accgatctgt cccagtacgc gcctcgcatc ttcacgatgc agatcaagcc ggacaagatc
      241 ggcgatgtga tcggtccgaa gggcaagacg atccgcggca ttcaggacgc caccggcgcc
      301 aagatcagca tcgaggacac cggagtcgtc accatctccg ccgttggcgg cgaggcgggt
      361 gagaaggcgc gagcgatggt ggcggccatc accaccgagc cggaagtcgg ccgcacgtac
      421 gaaggccccg tcaagagcac aacggctttc ggcgccttcg tcgagattct gcccggggtc
      481 gaggggctcc tccacatcag cgaactgcaa cacggccgca ccgagaagac ggaggatgtg
      541 gtcaagaagg gggacatagt ccaggtcaag ctgctcgagg tcgacgaccg cgggcgaatg
      601 aagctctccc ggaaggcgct gctgcccagg gaatagccct tcgtggaaac agtccagctc
      661 gacgaggggt tgcgcaggac cactgcaccg aacggcctgg tcgtcctcac tgaggagctg
      721 ccgggtgtcc gttcggcggc ggtgggcatc tacgtccgca ctgccagcgc gcacgagccg
      781 cgaaaccagc tggggatctc ccatctgctc gaacacatgg tgttcaaagg cacggagcgc
      841 cggacggcgc aacagctcgc cctcgagctg gagatccgcg gcggcggcct ggatgcattt
      901 actggccggg actacaccag ctaccaggcc cacgtgctcg atgccgacct gccgttggcc
      961 atcgaaatcc tcaccgacct cgtccgccgc ccactgcttc gcgagagcga tctcgagccg
     1021 gagcggaacg tcatccacga agagatcaac ggagtggccg atacgccgga cgacctcgtc
     1081 ttcgagcttc atgccgagac gctctggccg gagcacccgt acgggtattc catactcggt
     1141 acccgggaat cgctcgacgc gctttcggcc gaggacctga aggtcctgca tcggggcgga
     1201 tactatcgcg gcaactgtgt gattgccgcg gcggggcacg taaatcacga gcagcttctg
     1261 actgtgctcg aacgggaagg ctggttcgag ggcgttactc gcgaaccgcc tcgcggggga
     1321 gttgtccctg ctcccgcggt gcggggcgcc agccgcaccg aagaacgcga taccgcgcag
     1381 acccacatcg tgtttggcac tgacacattt ccgctgcgcg atccgcgccg ctttcccctc
     1441 gccatcctga caaacgtgtt cggcggcggc atgtccagcc ggctctttca gcgagtccgg
     1501 gaggagctcg gcctggccta cgcagtcttt gcctacaagc acttctacca gggctcgggg
     1561 caactcgggg tttatgtggg tacccaggct gccaccgccg accgagccgt ggaggccatt
     1621 cgcgtcgagt acggccgcct ggcccgcgag ggccttggca tggcggagct ggccaacggc
     1681 aagcaacagc tcaagggcca ggtcatgctc tcgctggaga gccccgcggc ccggatgggc
     1741 cggctggcgg gcttcatcct gcacgatgac cactaccggc cgctggacga gatgctgacc
     1801 gagatcgatg ccgttacgtc cgaccagatc gtggaggtgg cgcgcgagtt cttcgcgccc
     1861 gaacggcaga cggtggtacg tttggggccg gataaaaacg gtaagcggta aacggtgaac
     1921 ggggccttcc tggcgcaacc ggtactgctg accgtttctg attcacaggt tgtcctcacc
     1981 gcttccggtt cactcttcac ggttcaccgc ttttctgacc tcttacttcc gagaaagacc
     2041 aatgaagatc ggcgtcccga aggagatcaa gaccaacgag aaccggatcg cgctggtgcc
     2101 tgccggcgcc gaggcgctgg tgggagcggg acactcggtc ttcgtggaac agggcgcggg
     2161 cgccggcagc gggttttcgg acgacgccta ccggtcggcc ggcgcctcga ttctgccgac
     2221 tgccgatgaa gtgtggggcc aggccgagat gatcatgaag gtgaaagagc ccatcgccgc
     2281 cgaatggccc cgtatgcgcc gggggcagct cgtctacacc tacttccatt tcgccgccgc
     2341 cgaggatctg acccgggcgg tgatcgattc tggcgcggtg gcgattgcgt acgagaccgt
     2401 gcagctcgag agcggcgagt tgccgctact cacgccgatg tcggaggtgg ccggccggat
     2461 ggcggtgcag gagggggcca agtacctcga gaaggtgttc gggggcagcg gtatcctgct
     2521 cggaggggtg ccaggcgtcg cgccgggaga ggtcgtgatc atcggtggcg gggtagtggg
     2581 catcaacgcc gccaagatgg ccgctggtct gggtgcccat gtgaccatcc tggacatctc
     2641 gctggaccgg ctccgttatt tggccgatgt acttcccgcc aatgtggaga ccgtctactc
     2701 caaccgccac aacattctgg acgccatccg acgggccgat ctggtagtgg gggcggtgct
     2761 cctccccggg gctaaggccc cccacctggt caagcgggca gacctcaagg tcatgaagcc
     2821 ggggtcagtc atcgtcgatg tggcggtgga ccagggcggg tgcgtggaaa ccatcaaacc
     2881 gaccacgcat gagaatccca cgtacttcgt agacggcatt ctgcactacg ccgtggcaaa
     2941 tatgccgggc ggcgtccccc ggacgtctac ccttgccctg accaatgcta cgctgccata
     3001 cggacttaag ctcgccaagc agggttggcg tgcggcgtgc aagtccgatc cggcgttacg
     3061 gctcggcctg aatgtggtcg aggggaaggt ggtttacccg ggggtggccg aggcgttccg
     3121 gcttcccctc gccgacgtca acagcgttgt ctgagagggt cccggaggac gcggtcaggg
     3181 tcctgattgc gcgcctcccc cacgcggacg acctccccct gccgagcccg gccacagccg
     3241 ggtccgccgg gtacgatttg gccagcgcgg aagacggtg
//
LOCUS       DASUYN010000578         2017 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_622470, whole genome shotgun sequence.
ACCESSION   DASUYN010000578 DASUYN010000000
VERSION     DASUYN010000578.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2017)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2017)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2017
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_622470"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(108..869)
                     /gene="recO"
                     /locus_tag="VF061_11340"
     CDS             complement(108..869)
                     /gene="recO"
                     /locus_tag="VF061_11340"
                     /inference="COORDINATES: protein motif:HMM:TIGR00613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HEX6670148.1"
                     /translation="MPQIDSPAIVLSTLRYGETSKIVRLATREHGVQSAIAKGALRPR
                     SRFGAALQFLSEGQARLLVKEHRELHILASFDLLRLHAGLAADLERYATASTLAEVML
                     RFAPADPHAESYDLLREALGLLEIAPPPELEALGFRVLWQLVSALGFAPALEACVRDG
                     TPLPADGGLAFSTREGGALCPACAASHGATALPADARADLAALMDAGAVLPPLDRRHA
                     ESHRRLLARYIRYHLGEGADLPALEFWLRRPWMAA"
     gene            complement(892..>2017)
                     /locus_tag="VF061_11345"
     CDS             complement(892..>2017)
                     /locus_tag="VF061_11345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670149.1"
                     /translation="SPGPECPDVPTFPSSAIHHPEPMTRLAALAFATGILLGCADTNA
                     PPPDPVELLLVVNRQANSLTIVPVDQSEGPVSVDLGTPRGAPRSVAARERFAVVPLGD
                     VDAVAVVDLLSRSLVHRIPLPLGSGATGAIMVNDSIAYVGNPGRNSVSLVNVLSRRTA
                     EVLAGVYPQGFALARGRLFVLNGNLDATGEPVGASWITVINPGTNALAPGIDSIPLTG
                     PGNAAYATVGGDGLIYVVNRGGSMPAEGRLSVVDPLERREVASFAGLGLLPGELATDG
                     RSRVFVSSLAEGLLEFNTDSNAVIRGEGEGIPISTNAGVAVDSEGRVYAVEAGACAPG
                     QPGVAHVLDAELEEIRLIPLGRCAAGALVVRIGVEAGGGP"
BASE COUNT          300 a          727 c          730 g          260 t
ORIGIN      
        1 ggtaatgccc cgccggcgct cctcggcgag ccggtccatg gcgcggccgg tgagcgcctc
       61 caccagcgcc gacttgccgt ggtcgatgtg gccggccgtt ccgacgatca tgcggccatc
      121 cacggccgcc ggagccagaa ctccagcgcc ggcaggtcgg cgccctcgcc gagatggtag
      181 cggatgtagc gggcgagcag ccgccggtgg gattcggcgt gacggcggtc gagtggcggc
      241 agcacggcgc cggcatccat cagcgcggcg aggtcggccc gggcgtcggc gggcagcgcg
      301 gtggcgccat ggctggccgc gcatgcggga cagagcgcgc cgccctcgcg ggtgctgaac
      361 gcgaggccgc cgtccgccgg cagcggagtg ccgtctcgca cgcaggcttc cagcgcgggc
      421 gcgaagccga gggcgctcac cagctgccag aggacgcgga atcccagcgc ttcgagctcg
      481 ggaggcggcg cgatctcgag gagacccagc gcctcccgca gcagatcata gctctcggcg
      541 tggggatcgg cgggcgcgaa gcgcagcatc acctccgcga gggtcgaggc ggtggcgtat
      601 cgctcgagat cggcggcgag gccggcgtgg agccgcagca ggtcgaagct ggccaggatg
      661 tggagctcgc ggtgctcctt caccagcagg cgtgcctgcc cctcgctcag gaactggagc
      721 gccgccccga agcggctccg cggccgcaac gcgcccttgg cgatggcgct ctggaccccg
      781 tgctcccggg tggccagccg cacgatcttg gaggtctcgc cgtaccgcag tgtcgagagg
      841 acgatcgcgg gcgagtctat ttgtggcatg ccggaaagat acgggtcccg ctcaggggcc
      901 gccgcccgcc tccaccccga tccggaccac cagcgcgccg gcggcacagc ggcccagcgg
      961 gatgagccgg atctcctcca gctccgcatc gagcacatgc gcgacgccgg gctgacccgg
     1021 cgcgcaggcc ccggcctcga ccgcgtagac cctgccttcg ctgtccaccg cgacaccggc
     1081 gttggtggaa atgggaatgc cttctccctc cccccgaatc acggcgttgc tgtcggtgtt
     1141 gaactcgagc agcccttcgg ccagggagct cacgaagact cgcgagcggc cgtcggtggc
     1201 cagctcaccg ggcagcagtc ccaggccggc gaagctcgcg acctcccggc gctccagcgg
     1261 atccacgacc gagagccgcc cttccgcagg catcgagccg ccccgattga ccacgtagat
     1321 cagcccgtcg ccgcccaccg tggcgtaggc ggcattgccc ggcccggtga gcgggatcga
     1381 atcgatgccg ggggcgaggg cgttggtccc gggattgatg acggtgatcc agctcgcccc
     1441 caccggctcg cccgtcgcgt ccaggttgcc gttgagcacg aacagccggc cccgtgccag
     1501 agcgaacccc tgcgggtata cgccggccag tacctccgcc gtccggcgcg acagcacgtt
     1561 caccagcgag acgctgttcc gtcccggatt gccgacgtag gcgatggagt cgttcaccat
     1621 gatcgctccg gtcgcacccg accccagcgg cagcgggatc cgatgcacca gcgaccggct
     1681 cagcaggtcc acgacggcga ccgcgtccac atcgccaagc ggcaccacgg cgaagcgctc
     1741 ccgggctgcc accgaccgcg gggcgccccg cggggtgccc aggtcgaccg acaccggacc
     1801 ttccgactgg tccaccggca cgatcgtcag cgagttggcc tgccggttca ccaccaggag
     1861 aagctccacc ggatccggcg gcggcgcgtt ggtgtcggcg cagccgagca ggatcccggt
     1921 ggcgaatgcg agggcggcga gacgggtcat gggctccggg tggtggatcg cggatgaggg
     1981 aaaggtaggc acatcggggc attccggccc ggggcta
//
LOCUS       DASUYN010000579         4872 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1947093, whole genome shotgun sequence.
ACCESSION   DASUYN010000579 DASUYN010000000
VERSION     DASUYN010000579.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4872)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4872)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4872
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1947093"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..979
                     /locus_tag="VF061_11350"
     CDS             <1..979
                     /locus_tag="VF061_11350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017950433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HEX6670150.1"
                     /translation="NALPHLRHKVVTNNHDAASMLKWAVFEMNRRYELLQANGARNLA
                     DFNRKVEEGKQPLRHPARPKPTLVTISAEARDTPPEPPAEETYTDGILPMIVIVIDEL
                     ADLMMTVQAEVETPLAMLAQKARAIGIHLILATQRPSVNVITGLIKANFPSRIAFRVA
                     SKVDSRTILDQNGAEALLGNGDMLFLPPGKSEPMRLQGAYISTDDTEKVMDWYVARRE
                     ARRAALLTPATESDILEVMRAQESEGEGGPGDDEAGERDALFREAAEACIQNQGGSTS
                     LLQRRLRIGYGRAARIIDQLHYAGILGPPDGSKPREVLVGFDQLDEYCK"
     gene            1099..2565
                     /locus_tag="VF061_11355"
     CDS             1099..2565
                     /locus_tag="VF061_11355"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HEX6670151.1"
                     /translation="MTRLLALLVLLALVPPALAAQSDDASRLVAALLGDTPMISDLQT
                     LTDRIGGRPTGSAANQRAFDWALERFREAGVEARKEPFRMPGLWLERAARATIRGGGV
                     SFGARVAALPFSAATAAAGLTAPLVDAGRGTEADFAALGGRAKGAFVLIETEELLDLD
                     GLFREYVEAGHIERRAIAAGVAGLVYMSSRPGNTLARHNAALGWANRHPMMMMERDAA
                     ARALRLLRTGTSLTLSAVLDIRSGPAYTAHNVVGEIRGSTRPDEIVVIGAHLDSWDLG
                     TGALDNGANCAMVLDLARQIVRLGLKPARTIRFALWNGEEQNLNGSYGYTLSHAAELD
                     RHVMASSYDIGTGAITGYFTGGRADMVPVLERALAPVAALGPFTHVNVPIVGTDNYDF
                     MMQGVPNLVANQASANYGPNYHARSDEFGRADLRQLRLNAAIAAATTWGFATLDLSRP
                     RQTAAQVDSMVRNTDLPDQMKSFNVYDAWVAGKRGLRP"
     gene            complement(2655..4091)
                     /locus_tag="VF061_11360"
     CDS             complement(2655..4091)
                     /locus_tag="VF061_11360"
                     /inference="COORDINATES: protein motif:HMM:NF019850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase family protein"
                     /protein_id="HEX6670152.1"
                     /translation="MGGIAVDSRQVRPGDLFVAQRGERTDGSRFVPEARQRGAVAACS
                     SGPIPGLPTIVTADPRGAVSRLAETLYRHPAAQLRLVGITGTLGKTSTALLVQSALAA
                     SGVRVGVIGSLGVRHRGQVADTGMTTPDAPSIHRALRDMVDAGVTTAVLEVTSHGIAL
                     KRVAGLTFALGALTNLVPDEHLDFHGTTDHYLRTKARFFDMLQPGAPLVVNRDDAHVR
                     ELVAGAGLTRIRPIVTVSAEGDPEADVAVSGLRSDAAGSVFALEIRRPLPRPGGADLP
                     AGAVPLVLPVLGMHQVANAALAAVIALLAGGAPAGVTESVAELAPIRRRMEVVRQAAP
                     TILDDTVGNPRAMEAVFATIRAIPHAAVRIAFGIRGARGATINRRLASALARGVRAAA
                     RPVRLVVTASEEAAGPRDRVRDEEREAVLAVLRQEGVTFTYEPTLGAAVRHALEGAGE
                     GDLVLLLGAQGMDEAADLARAVVGTNST"
     gene            4291..4707
                     /locus_tag="VF061_11365"
     CDS             4291..4707
                     /locus_tag="VF061_11365"
                     /inference="COORDINATES: protein motif:HMM:NF014119.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HEX6670153.1"
                     /translation="MRSRRSFVPVSHWGDRRQRRGMAGERAAIAYLTACGWNVESHRF
                     RMGRHDLDLVARKGHLVAFVEVKTRRSNACGSALESVSALKRHILGKVALLWRLRHGR
                     TGDTYRFDLLAIRDMGGGRYEVEHVEDAWRLGWSPC"
BASE COUNT          735 a         1727 c         1740 g          670 t
ORIGIN      
        1 caacgcgctg ccccatctcc ggcacaaggt ggtgaccaac aaccacgacg cggcctccat
       61 gctcaagtgg gcggtgttcg agatgaaccg gcgctacgag ctgctccagg ccaacggggc
      121 ccgcaacctg gcggacttca accgcaaggt cgaggaaggc aagcagccgc tcaggcaccc
      181 ggctcgaccc aagccgacgc tggtcaccat cagcgcggag gcgcgggaca ccccgcccga
      241 gccgccggcg gaagagacct acaccgacgg catcctgccc atgatcgtca tcgtgatcga
      301 cgagctggcc gatctcatga tgacggtgca ggcggaggtg gagaccccgc tggcgatgct
      361 ggcccagaag gcccgcgcga tcggcatcca cctgatcctc gcgacccagc ggccgtcggt
      421 gaacgtcatc accggcctga tcaaggcgaa cttccccagc cggatcgcct tccgggtggc
      481 gtccaaggtg gacagccgga cgatcctgga ccagaacggc gccgaggcgc tgctcggcaa
      541 cggcgacatg ctgttcctgc cgccgggcaa gagcgagccg atgcggcttc agggcgccta
      601 catcagcacc gacgacaccg agaaggtgat ggactggtac gtggcccgcc gggaagcccg
      661 ccgcgccgcg ctgctgacgc cggccaccga gtccgacatc ctcgaggtga tgcgggccca
      721 ggagagcgag ggcgagggcg gaccgggcga cgacgaggcc ggggagcggg acgcgctgtt
      781 ccgggaggcg gcggaggcct gcatccagaa tcagggcggc tccacctcac tgctccagcg
      841 ccggctccgc atcggctacg gccgcgccgc gcggatcatc gaccaactgc actacgcggg
      901 catcctgggt ccgccggacg gaagcaagcc gcgggaggtg ctggtcgggt tcgaccagct
      961 ggacgagtac tgcaagtgac acgtgggtgg cgtggagatg ggcggggaat acgctgtcat
     1021 cctgagcgca gcgaaggagc cgatgtccgc atggtcccct tcgcttcgct cagggtgaca
     1081 acaaaccgga caacaaccat gacgcgtctc ctggcgctcc tcgtgctcct cgcgttggtt
     1141 ccgcccgccc ttgccgctca atccgacgac gcctcccgtc tggtcgccgc gctgctcggc
     1201 gacaccccga tgatcagcga tctccagacc ctcaccgacc gcatcggcgg ccgcccgacg
     1261 ggctccgccg ccaaccagcg cgcgttcgac tgggccttgg agcgcttccg ggaggcgggc
     1321 gtcgaagcgc ggaaggagcc gttccggatg cccgggctct ggctggagcg cgccgcacgg
     1381 gccacgatca gaggtggcgg ggtgagcttc ggggcgcggg tggccgcgct gccgttctcc
     1441 gccgccacgg ccgccgcggg gctcaccgct ccgctggtgg atgccggcag gggaacggag
     1501 gccgatttcg ccgccctcgg cggacgagcg aagggtgcct tcgtgctgat cgagaccgag
     1561 gagctgctcg atctcgacgg cctcttccgc gagtacgtcg aggccgggca catcgagcgg
     1621 cgcgccatcg ccgcgggcgt ggccgggctg gtctacatgt cctcgcgccc gggcaacacg
     1681 ctggcccgcc acaacgccgc gctcggctgg gccaaccggc atcccatgat gatgatggag
     1741 cgggacgcgg cggcgcgggc gctgcggctg ctccgcaccg gcacctcgct cacgctcagc
     1801 gcggtgctcg acatccggtc gggcccggcg tacacggccc acaacgtggt cggcgagatt
     1861 cgcggcagca cccggcccga cgagatcgtc gtgatcgggg cccacctcga ctcctgggac
     1921 cttggcaccg gcgcgctgga caatggcgcc aactgcgcga tggtgctcga tctcgcccgg
     1981 cagatcgtgc ggctggggct gaagccggcg cggaccatcc gcttcgcgct gtggaacggc
     2041 gaggagcaga acctcaacgg ctcctacggc tacaccctga gccacgcggc ggagctggac
     2101 cggcacgtga tggcctcatc ctacgacatc gggaccggcg ccatcacggg gtatttcacc
     2161 gggggccggg cggacatggt gcccgtgctg gagcgcgcgc tcgcgccggt ggcggcgctg
     2221 ggacccttca cccacgtcaa cgttcccatc gtgggcaccg acaactacga cttcatgatg
     2281 cagggcgtgc ccaacctggt ggccaaccag gcgtcggcga actacgggcc caactaccac
     2341 gcgcggtcgg acgagttcgg ccgggccgac ctccgccagc tccgcctgaa cgcggcgatc
     2401 gccgccgcga ccacctgggg cttcgccacg ctcgatctgt cgcggccacg gcagaccgcc
     2461 gctcaggtgg actcgatggt ccgcaacacc gatctgccgg atcagatgaa gagcttcaac
     2521 gtgtacgacg cgtgggtggc ggggaagcgg gggcttcggc cttaacgctc gcggacgggg
     2581 ttgtcttgcc gctgatgaac gcagaagacg catgttcccg ttcgctgcgc tcagggtgac
     2641 acaaaggcac acactcacgt tgagttggtg ccaaccaccg cccgcgccaa gtccgccgcc
     2701 tcatccattc cctgcgcccc cagcagcagc accaggtctc cctccccggc cccctccagc
     2761 gcgtgtcgca ccgcggcccc gagcgtgggc tcgtaggtga acgtcacccc ctcctgccgg
     2821 agcaccgcca gcaccgcttc gcgctcctcg tcccgcaccc ggtcccgcgg gccggccgcc
     2881 tcctcgctcg cggtgaccac cagccgcacc ggtcgggcgg ccgcccgcac gccgcgtgcg
     2941 agcgcggagg cgaggcgacg gttgatcgtc gccccgcgcg ccccgcgaat cccgaaggcg
     3001 atccggaccg cggcgtgggg gatggcccgt atcgtggcga acacggcctc catcgcccgg
     3061 gggttgccca ccgtgtcgtc gaggatggtg ggggcggcct ggcgtacgac ctccatgcgc
     3121 cggcggatcg gcgcgagctc cgctaccgac tcggtgacgc ccgccggcgc ccctcccgcc
     3181 agcagcgcga tcaccgccgc gagcgccgcg ttggccacct ggtgcatgcc gagcaccggg
     3241 aggaccagcg ggacggcgcc ggcgggcagg tcggcgccac cgggccgggg cagtgggcgg
     3301 cggatctcga gcgcgaacac cgaccccgcc gcgtcgctcc gcagcccgct caccgccaca
     3361 tcggcctcgg ggtctccctc ggcggagacc gtgacgatgg gccgtatccg ggtgagtccg
     3421 gccccggcca cgagctcgcg gacgtgggcg tcgtcccggt tcaccaccag cggcgcgccg
     3481 ggctggagca tgtcgaagaa gcgggccttg gtgcggaggt agtggtcggt ggtgccgtga
     3541 aagtcgaggt gctcgtccgg aaccaggttg gtgagcgcgc cgagcgcgaa ggtgagcccc
     3601 gcgacccgct tgagcgcgat cccgtgggag gtcacctcga gcaccgcggt cgtgacgccc
     3661 gcgtccacca tgtcgcgcag cgcccgatgg atcgaggggg cgtccggggt ggtcatcccg
     3721 gtatccgcca cctggccccg gtgccgcacg ccgagcgatc cgatcacgcc gacccgcact
     3781 ccgctggccg ccagggcgga ctgcaccagg agcgcggtcg aggtcttgcc caacgtgccg
     3841 gtgatgccga ccaggcggag ctgcgcggcg gggtggcggt agagcgtctc ggcgagacgc
     3901 gacaccgccc cccgcggatc ggcggtcacg atggtgggga gcccgggaat gggcccggag
     3961 gagcaggcgg ccacggcgcc gcgctgtcgg gcctcgggca cgaagcggga accgtcggtc
     4021 cgctcgccgc gctgagccac gaacaggtcg ccggggcgca cctgccgcga gtccacggcg
     4081 atgccgccca cctcgacgtc gctgccatgg agcggtaggc ccagcgcgtc ggccagctcg
     4141 gagagtcgga tcgccgtcct cgcggtcgga gtcggaggag tctagcgccc cccaacggtt
     4201 cgggcgagac cggcagctct ccggaaattt cgtccgctgt cgcgcggaat cggtgcgccg
     4261 cgctcgcccc tccggtccta tcctcggccc atgcgatccc gccgcagctt cgtgcccgtg
     4321 agccactggg gagatcggcg tcagcgccgc ggcatggccg gggagcgggc cgccatcgcc
     4381 tacctcaccg cctgcgggtg gaacgtggag tcccaccggt tccggatggg ccggcacgat
     4441 ctggatctgg tggcgcgcaa aggccacctg gtcgccttcg tggaggtgaa gacccgccgg
     4501 tcgaacgcct gcggctccgc cctcgaatcg gtgagcgcgc tcaagcgcca catcctgggc
     4561 aaggtcgccc tgctctggcg gctcaggcac ggccgaacgg gcgataccta ccggttcgac
     4621 cttctggcga tccgggacat gggtgggggg cgttacgagg tggagcacgt ggaggatgcg
     4681 tggcggctgg ggtggagccc gtgctgaggg ggacgggggg ggtgtcagcc tgagcgaagc
     4741 gaaggcgacg agacctggtt atgccgcctt cgctttgctc aggctgacaa tcccccgaat
     4801 cccgggtggc tggaaataag tcacataggt actattgctt cggaagatat tcggtattag
     4861 cttggcctga gt
//
LOCUS       DASUYN010000580         5313 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_841675, whole genome shotgun sequence.
ACCESSION   DASUYN010000580 DASUYN010000000
VERSION     DASUYN010000580.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5313)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5313)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5313
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_841675"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..516)
                     /gene="ilvN"
                     /locus_tag="VF061_11370"
     CDS             complement(<1..516)
                     /gene="ilvN"
                     /locus_tag="VF061_11370"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: protein motif:HMM:NF008864.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1990610 - acetolactate synthase regulator
                     activity [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HEX6670154.1"
                     /translation="MSVAQAVVVLLEDHLITLNRVVGLIRRRTFPVHSLSVGPTGTPG
                     VSRLTIMMQSDESAAERAVQHLQKIVGVHDAAVIPQSDAVVRELALVKLRPAPERYAE
                     LLDVVQLYRATLVDESLDGVVLELTGSEAFVLSCLRALERFAIVEVARSGAVAMESGT
                     AELPFGAQPQLE"
     gene            complement(513..2222)
                     /gene="ilvB"
                     /locus_tag="VF061_11375"
     CDS             complement(513..2222)
                     /gene="ilvB"
                     /locus_tag="VF061_11375"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005948 - acetolactate synthase complex
                     [Evidence IEA];
                     GO_function: GO:0003984 - acetolactate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009099 - valine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic-type acetolactate synthase large
                     subunit"
                     /protein_id="HEX6670155.1"
                     /translation="MSDALSGAQILCRTLMEEGVSLLFGYPGGAIMPFYHALPEYPSL
                     RHVLVRHEQAAAHAADGYARATGRPGVCVATSGPGATNLVTGLATAHMDSTPLVAITG
                     QVPRAMLGRDAFQETDIIGITQPITKHSVLVEDVEDLADAVREALAVATHGRPGPVLV
                     DIPKDVQQAKAGGRAVGRYGGSVGPSDPPTALPPYRLTDGLDHAVRLLAGAERPLIMA
                     GHGIILADAYEELRQLAQRTGIPVITTLLGISAFPESHPLHLGMPGMHGEVHVNRAIQ
                     QADLILGVGLRFDDRVTGNLAAFARDARVIHIDLDPSEIGKNVATEVALVGDAREILR
                     ELVAHVAPRDCEAWRAEIEGYRRERQESFRGDLSPAGILAAIDRSAGGRCTIVSDVGQ
                     HQMWVAKLFPYRRPNTHLTSGGLGTMGFAVPAAMGAALARPDEPVWAISGDGGFQMNM
                     QEIATMVQEGIPVKMAVFNNGYLGMVRQWQQFFHGRRYSATPIWSPDYVRLAEAYGIF
                     GRRVERGDQVDEAVREAIAQPGPALVEFLIEQEANVFPMIPPGGSLSEPIEGEPAPPL
                     VTA"
     gene            complement(2223..3779)
                     /locus_tag="VF061_11380"
     CDS             complement(2223..3779)
                     /locus_tag="VF061_11380"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: protein motif:HMM:NF002086.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003852 - 2-isopropylmalate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HEX6670156.1"
                     /translation="MGTTHVLIFDTTLRDGEQAPGNSLTPEEKIRLARQLDALGVDII
                     EAGFPAASEGDYRSVREIAAEVRRPVIAALARCTERDIDLAGEALGGAERPRIHVFIS
                     TSDLHMREKLRLSRDEVVGRARAAVRRARQFTDDVEFSAEDASRTDPDFLCRVVQAAI
                     EEGATTINLPDTVGYAMPAEYGAMFRDVLARVPGADRVTLSAHCHDDLGLAVANSLAA
                     IAAGARQVECTVNGIGERAGNAALEEIVIASQVRGAALQFHTGVEPREIYRTSQLLSY
                     LTGVFPQPNKAIVGRNAFAHEAGIHQHGMLQNGLTYEIIRPEMVGIPRSTLVLGKHSG
                     RHGLERRFRDLGYDLTEEQLNEVYREFIALADRKREILDEDLLALLHESFHDAPEEYQ
                     LTHLRVVCGSVSPTAEVRMTGAWAEERAARGTGDGPIAAAFTAISEITGRQLEVISLQ
                     LRSLTPGRDSVGQVFLQVKVDGKSLSGHGASTDIVEASARALVNALNKARHADRLESS
                     SLNSVYLWGV"
     gene            4318..>5313
                     /locus_tag="VF061_11385"
     CDS             4318..>5313
                     /locus_tag="VF061_11385"
                     /inference="COORDINATES: protein motif:HMM:NF012531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670157.1"
                     /translation="MAANGQRIHPAGSRRKSPDSHPHAAVPAAMALDPSRERDACGVG
                     FVAAASGVRSHEVVEMALEAVARVAHRGAASTDNSGDGAGLLTQIPARLFYRDAYRLG
                     LHLQPGLPFGVGAFFLPREPEALGAAVRMIEEVLAGDGIPFLGWRDVPVNPGALGPTA
                     LASCPVIRQVLVGRPALAADEEAWERALYLARREMERRAEARNLSGFYACSLSCRTVV
                     YKALLTGTQLSAFYTDFRYPEYESAIAVFHQRYSTNTLPSWPLAQPFRLLAHNGEINT
                     LWGNRNAMTMRQPMLASPVWGPKIARLRQVIWAEGSDSASLDNAMELLVRSGRDPV"
BASE COUNT          749 a         1880 c         1891 g          793 t
ORIGIN      
        1 ttccagttga ggttgggccc cgaagggcag ctcggccgta ccggactcca tggcgacggc
       61 gccgcttcgg gcgacttcga cgatcgcgaa ccgctcgagg gcccgcaggc aggagagcac
      121 gaaggcctcc gagccggtga gctcgagcac gaccccgtcg agggattcgt ccaccagggt
      181 ggcacggtag agctgcacca cgtcgagcag ctcggcgtac cgctccgggg cgggtcgaag
      241 cttgaccagc gccagctcgc gaaccaccgc gtcgctctgg gggatcacgg cggcgtcgtg
      301 cacgccgacg atcttctgga ggtgctgcac ggcccgctcg gccgcgctct cgtccgactg
      361 catcatgatg gtgagcctcg agacacccgg cgtgccggtc ggaccgaccg acaggctgtg
      421 cacggggaag gtccgccgcc ggatgagccc gacgacgcgg ttcagcgtga tcaggtgatc
      481 ctccaggagg accaccacgg cctgcgcgac actcatgcgg tgacgagcgg gggggcgggc
      541 tcgccctcga tcggctcgga gagcgagccc cccggcggga tcatcgggaa gacgttggcc
      601 tcctgctcga tcaggaactc gaccagcgcg ggaccgggct gggcgatcgc ctcccgcacc
      661 gcctcgtcca cctggtcccc gcgctccacc cgccggccga agatcccgta ggcctccgcc
      721 agcctgacgt agtccgggct ccagatcggg gtcgccgagt agcggcggcc gtggaagaac
      781 tgctgccact gccgcaccat ccccaggtag ccgttgttga acacggccat cttcaccggg
      841 atgccctcct gcaccatcgt ggcgatctcc tgcatgttca tctggaatcc gccgtcaccc
      901 gagatggccc acaccggctc gtccggccgc gccagcgcgg cgcccatcgc cgccggcacc
      961 gcaaaaccca tggtgccgag tccgcccgag gtgaggtggg tattgggccg ccggtacggg
     1021 aagagcttgg ccacccacat ctggtgctgg cccacgtcgg agacgatggt acagcgtccg
     1081 cccgccgacc ggtcgatcgc cgccaggatg ccggcgggcg aaaggtcacc gcggaagctc
     1141 tcctgccgct cccggcggta gccctcgatc tcggcgcgcc aggcctcgca gtcccgcggc
     1201 gcgacgtggg cgaccagctc ccgcaggatc tcgcgcgcgt cgcccaccag ggcgacctcg
     1261 gtagccacgt tcttcccgat ctccgaggga tccaggtcga tgtggatcac cctggcgtcg
     1321 cgggcgaagg cggcgaggtt gccggtgacc cggtcgtcga agcggagccc cacgccgagg
     1381 atcaggtcgg cctgctggat ggcgcggttc acgtgcacct cgccgtgcat ccccggcatg
     1441 ccgaggtgga gcgggtgcga ctcggggaac gcgctgatgc ccagcagggt ggtgatcacg
     1501 ggaatgccgg tgcgctgggc cagctgccgc agctcctcgt aggcgtccgc gaggatgatc
     1561 ccgtgccccg ccatgatcag cgggcgctcg gccccggcga gcaggcggac ggcgtggtcg
     1621 agaccgtcgg taaggcggta aggcggtagg gcggtcggag gatccgacgg tccgacgctg
     1681 ccgccgtacc gccctaccgc cctaccgcct gccttcgcct gctgcacgtc cttcgggatg
     1741 tccaccagca ccggaccggg acgcccgtgg gtcgccaccg ccagggcctc gcgcacggcg
     1801 tccgccaggt cctcgacgtc ctccaccaga accgaatgtt tggtgatcgg ctgggtgatc
     1861 ccgatgatgt ccgtctcctg gaacgcgtcg cggccgagca tggcgcgcgg cacctggccg
     1921 gtgatggcca cgagcggcgt gctgtccatg tgcgcggtgg cgaggccggt gacgaggttg
     1981 gtggcgcccg gcccggaggt cgccacacag acaccgggac ggccggtggc gcgggcgtag
     2041 ccgtcggccg cgtgggccgc cgcctgctcg tgccggacca gcacgtgccg caggctgggg
     2101 tactccggga gggcgtggta gaacggcatg atcgccccgc cgggataccc gaagagcagg
     2161 ctcacgccct cctccatcag cgtgcggcac agaatctggg cgccggacag ggcgtcagac
     2221 actcacaccc cccacaggta gacggagttg agcgaggagg actccagccg gtcggcatgg
     2281 cgcgccttgt tgagcgcgtt gaccagcgcc cgggcgctgg cctccacgat gtcggtggag
     2341 gcgccgtgcc cggagagcga cttgccgtcc accttcacct gcaggaacac ctggcccacg
     2401 ctgtcccggc ccggagtgag agagcggagc tggaggctga tcacctccaa ctggcggccg
     2461 gtgatctcgc tgatggcggt gaacgccgcc gcgatcgggc cgtccccggt gcctcgagcg
     2521 gcccgctctt ccgcccacgc accggtcatc cgcacctcgg cggtggggct cacgctgccg
     2581 cagacgacgc ggaggtgggt cagctgatac tcctcgggcg catcgtggaa gctctcgtgg
     2641 agcagggcga gcagatcctc gtccaggatc tcccgcttcc ggtcggcgag ggcgatgaac
     2701 tcgcggtaca cctcgttgag ctgctcctcg gtgaggtcgt agcccaggtc gcggaagcgg
     2761 cgctccaggc catgacggcc cgagtgcttg cccaggacca gcgtggagcg cggaatcccc
     2821 accatctcgg gccggatgat ctcgtaggtc agcccgttct gcagcatccc gtgctggtgg
     2881 atcccggcct cgtgggcgaa tgcgttgcgg cccacgatgg ccttgttggg ctgggggaag
     2941 acgccggtca ggtacgagag cagctggctg gtgcggtaga tctcccgcgg ctccacgccg
     3001 gtgtggaact ggagggccgc gccgcgcacc tgggaggcga tcacgatctc ctccagggcc
     3061 gcgttgccgg cccgctcgcc gatgccgttc accgtgcact ccacctgccg cgcgccggcg
     3121 gcgatcgcgg ccagcgagtt ggcgacggcc agacccaggt cgtcgtggca gtgggcgctg
     3181 agggtgaccc gatccgcgcc ggggacccgg gcgagcacgt cgcggaacat cgcgccgtac
     3241 tccgccggca tggcgtaccc gacggtatcg gggaggttga tcgtggtggc gccttcctcg
     3301 attgccgcct gcaccacgcg gcagaggaag tcgggatcgg tccggctcgc gtcctcggcg
     3361 gagaactcca cgtcgtcggt gaactgccgc gcgcggcgga ccgcggcgcg ggcccgcccc
     3421 accacctcgt cccggctcag ccggagcttc tcccgcatgt ggaggtcgga ggtggagatg
     3481 aacacgtgga ttcggggccg ctccgcgccc cccagcgcct cgccggccag gtcgatgtcg
     3541 cgctcggtgc accgggccag ggcggcgatg acgggccgcc ggacttcggc cgcgatctcc
     3601 cgcacgctgc ggtagtcccc ttccgacgcg gccgggaacc cggcctcgat gatgtccacg
     3661 ccgagcgcgt cgagctgccg ggcgagtcgg atcttctcct cgggggtcag gctgttgccg
     3721 ggggcctgct cgccgtcacg gagcgtggtg tcgaagatga ggacgtgggt ggtgcccatg
     3781 ggcgcgcttt cggttccggg aatgggtgga cgaaaaagcg ccgcggacct ttcgggtccg
     3841 cggcgccggt gcattcgatt cgagtctgct acgctgtcac gctgctcgta tcggcacgcc
     3901 gcgaacccct ggctcaccaa gaaggctggt aagcaggagg ccaaggagga cgacgacgag
     3961 cgacaggtgg agcgacatga tccgggtcag gttgccttcg atacgggtgg gctgccggac
     4021 agggagccgg tcttcgacag cgttcgtgag gttaccgtgc gggcgggcgc gctgtcaagg
     4081 ggccggccca gactcccgcc ctggttgacg aatacgccgt cgtgcataat aatacgttca
     4141 tgaagcgcac cgccctgctt ccggtcattc tccttaatac cgtccgctcc acgggagcga
     4201 ccgggtagca acgcgcgcac gcgattgttc ccggcccgtt cccaggtgga gcgggctttt
     4261 tctttgcccc gcaaccggcc tctccggccg atggggcgcc aaccagcagg aggcaccatg
     4321 gccgccaatg ggcagcggat ccacccggcc ggttcccgca ggaagtcccc cgactcccat
     4381 ccgcacgccg ccgtgccggc ggcgatggcc ctcgacccct cgcgcgagcg cgacgcctgc
     4441 ggcgtggggt tcgtcgccgc cgcgtccggc gtgcggtcgc acgaggtggt ggagatggcg
     4501 ctcgaggcgg tcgcgcgcgt ggcgcaccgg ggtgcggctt cgaccgacaa ctcgggcgac
     4561 ggcgccggcc tgctgaccca gatccccgcg cgcctcttct accgcgacgc ctaccggctg
     4621 ggactgcacc tccagcccgg cctgcccttc ggcgtgggcg ccttcttcct cccccgcgag
     4681 cccgaggcgc tcggcgccgc ggtgcggatg atcgaggagg tgctcgcggg cgacggcatc
     4741 cccttcctcg gctggcgcga cgtgccggtg aaccccggcg cgctggggcc gaccgcgctg
     4801 gcatcctgtc cggtgatccg gcaggtgctg gtgggccgcc ccgccctcgc ggccgatgag
     4861 gaggcgtggg agcgcgcgct gtacctggcg cgccgggaga tggagcgacg agcggaggcg
     4921 cggaacctgt ccgggttcta cgcctgctcc ctgtcctgcc gcaccgtcgt ctacaaggcc
     4981 ctcctcaccg gcacccagct ctccgctttc tacaccgact tccgctaccc ggagtacgag
     5041 agcgcgatcg ccgtctttca ccagcgctac tcgaccaata ccctgcccag ctggccgctg
     5101 gcgcagccct tccggctgct ggcgcacaac ggcgagatca acaccctgtg gggcaaccgg
     5161 aacgccatga ccatgcgcca gccgatgctc gccagcccgg tctggggccc caagatcgcg
     5221 cggctgcgcc aggtcatctg ggcggaggga agcgactcgg cgagcctgga caacgcgatg
     5281 gagctcctgg tccgctcggg ccgcgacccg gtc
//
LOCUS       DASUYN010000581         5258 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_623557, whole genome shotgun sequence.
ACCESSION   DASUYN010000581 DASUYN010000000
VERSION     DASUYN010000581.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5258)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5258)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5258
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_623557"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            119..2056
                     /locus_tag="VF061_11390"
     CDS             119..2056
                     /locus_tag="VF061_11390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="Plug domain-containing protein"
                     /protein_id="HEX6670158.1"
                     /translation="MIAAALLALPPSVAAQTPTRAPDLPPAGQVITGETLRRAGATRL
                     SDILAIAHRWDVTTVDGFTWSASALGGAPFLPARWTVMVDGRRMDEDLFGVGNLDRLG
                     VSLDQVARVELIEVPRLVAGGLTTDGLIHIRTTEPSGGATGRGSFVTGSEIGDPGPFA
                     FTPQATPNVDRMGHHASAEMGYGGADWFASAAVGWGRMVPTDPAIVERYIAALGSVPR
                     MRSTAPALKVGGRFGGGRHEAVLRHSHLEGALGVSPFGTEIAADQRFTLIGLAGDMAL
                     QGGRRLQYDVSHARNRARRPDARPGPALDWRMATTEARAEITRRDATLHLAGLRLRRR
                     SARAPNGLDDPTVALATAYFELRPGHGAGAVTASGAITVGEGEVGMAALLTRRVPVAR
                     GSALEAALSWERASGGDDNTIWAWAERGYGLLEESGVSFDVLGTRGTPERIGADIGLT
                     SDLGRSLSLSARAFLRRLRGLSLEQRELHFVVPTSSFDGPTAIVHGAGGEHAGAGVEL
                     AGRPTRGVEVRASYWVRGAVGGDTVYRNAWAAVPHHGARGTMEYVPVPGLELWLSGAY
                     RGPTRHRELTAVERESAGRYRERLDGAFTVDIALQKHLWNGRLRAHVGIRNLLGADLR
                     YHPTGATFGPTAIVHLGATLP"
     gene            complement(2073..2750)
                     /locus_tag="VF061_11395"
     CDS             complement(2073..2750)
                     /locus_tag="VF061_11395"
                     /inference="COORDINATES: protein motif:HMM:NF039641.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6064 family protein"
                     /protein_id="HEX6670159.1"
                     /translation="MQEWWTYSLSDFLLFSPRTYYRLIERHNLAVWPGQILTLGLGVT
                     MAALLRRPTPRRSRAALALLALLWVWVGWAFVARRYAAINWAATYAAWLFGLQAALLG
                     WLGAAGGRMRFGWKGDAAGLTGGALFAGSLALYPLLAPAVGRGWTQAEIFGIAPDPTV
                     LGTLGLLLNVEGSPRSRWALLAAPAAWCLLSGATLLAMGSPEAWILLAATLLVLALSL
                     APDRPAA"
     gene            complement(2750..3688)
                     /locus_tag="VF061_11400"
     CDS             complement(2750..3688)
                     /locus_tag="VF061_11400"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX6670160.1"
                     /translation="MSAGRPDRRAVVRTLAAGAAAALLRPYDVLARLPGAAVPLARAI
                     PSTGEKLPVVGLGTWITFNVGDDPVLRDEAAAVMKAFFGAGGRVIDSSPMYGSSQGVV
                     GYGLTKLGRTADVFSADKVWIGSGEAGPGQIEESRSLWGVPRFDLLQIHNLLGWEEHL
                     PRLLERKAAGRVRYVGITTSEGRRHREIERIMATRPIDFVQVTYNVLDRDVERTILPL
                     ARERGIAVLVNRPFRQGSLTREVERHPLPSFAREVGAATWAQLLLKFILSHPAVTCAI
                     PATTRPDHAAENVAAATGDLPDEAMRKRIVDHVERL"
     gene            complement(3685..4869)
                     /locus_tag="VF061_11405"
     CDS             complement(3685..4869)
                     /locus_tag="VF061_11405"
                     /inference="COORDINATES: protein motif:HMM:NF019640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX6670161.1"
                     /translation="MTGRQDREELLDRARGLGPLVRAHAEQAEQRRRLAPEVIAGLRE
                     TGLFRLLLPTSLGGLELDPATCALIVEEIAGFDSAAGWALQAGNEGAWWAARLPTEGA
                     EEIYRDNPSAVMAAAFHPPQQAVETAEGYRITGRAPLASNIHDADWLFLTALVMDGDH
                     PRIVSGAPIVLGLMLRSAEVKVVDTWYALGMRGSDSNDVVIEDVLVPRARTFPLTPDF
                     EPGAHHRGPLYRMPGVAAGSFLIAPVSLAVARAGITELKALAQKKTALGFSRPLRERN
                     GVQASVARADAMLRSARLFFYDTLVAGYARAVRGERFTLEQKADQLLASVHAATTAAK
                     VTDLMHRLAGTTGIYTRSPLERHFRDAQTLRHHGFLSENRFEAVGQVYLGVNPEFPMV
                     AL"
     gene            complement(4883..>5258)
                     /locus_tag="VF061_11410"
     CDS             complement(4883..>5258)
                     /locus_tag="VF061_11410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670162.1"
                     /translation="ESAVALASRRFVDLVETVREELPRATLILTTVYDPTDGTGRLPG
                     LESYGRLPLEQLERFNDTVRKTSGSLPRTLLADVHGHFLGHGVKAPEPERWYWSRNLI
                     EPNARGASEIRRVWWEMLGRVA"
BASE COUNT          751 a         1861 c         1928 g          718 t
ORIGIN      
        1 gggaggcagc ggtgagctat cagtcggtct tcacccaccg tcgtatggag caggtcttcc
       61 tcgccgccgg tatcggccgg cggttcgcca cccccgcatg gctccgcgac ttcctcgatt
      121 gatcgctgcc gcgctgctcg cgctgccgcc gtcggtggca gctcagacgc cgacgcgcgc
      181 gcccgacctc ccgcccgcgg gccaggtcat cacgggagag acgctccgcc gcgcgggcgc
      241 cactcggctc tcggacattc tcgcgatcgc gcaccggtgg gacgtgacga cggtggacgg
      301 gttcacctgg agcgcgtccg ccctcggtgg cgccccgttc ctgccggccc ggtggacggt
      361 catggtggac ggacggcgca tggatgagga tctcttcggc gtgggcaacc tcgaccgcct
      421 cggcgtgtcg ctggaccagg ttgctcgggt ggagctgatc gaggtgccgc ggttggtggc
      481 cggcggcctc acgaccgacg ggctcattca catcaggacc acggagccgt ccggcggcgc
      541 caccggcagg ggctcgttcg tcaccggcag cgagatcggg gacccggggc ccttcgcctt
      601 cacccctcag gccacgccga acgtggatcg catggggcac cacgcatcgg ccgaaatggg
      661 atacggcggc gcggactggt tcgcgagtgc ggcggtcggg tgggggagaa tggtgcccac
      721 cgaccccgcg atcgtggagc ggtacatcgc ggcgctgggc tccgtgcccc gaatgcgctc
      781 gaccgcgccg gcgctcaagg tgggagggcg gttcggcggc ggccggcacg aggccgtgct
      841 ccgccactcc cacttggagg gggcgctcgg agtgagcccg ttcggcaccg agatcgccgc
      901 cgaccagcgg ttcaccctca tcggcctcgc gggcgacatg gcgctgcagg gggggcgacg
      961 cctgcaatac gacgtgagcc acgctcggaa tcgagcgcgc cggcccgacg cgcggcccgg
     1021 cccggctctc gattggcgta tggccaccac cgaggcgcga gccgagatca cgcgacggga
     1081 cgcgacgctc cacttggccg gcctgcggct ccgccgccgg tcggcccgcg cgcccaatgg
     1141 cctggacgac ccgacggtcg ccctggccac ggcgtacttc gagctgcggc ccgggcacgg
     1201 cgccggtgcc gtgacggcca gcggcgcgat caccgtgggc gaaggcgagg tggggatggc
     1261 agcgctgctc acgcgacggg tgcccgtggc tcgggggagc gcgctggagg cggcgctgag
     1321 ctgggagcgc gcctccgggg gcgacgacaa cacgatctgg gcgtgggccg agcgcggcta
     1381 cgggctcctc gaagagagcg gcgtcagctt cgacgtcctg ggcaccaggg ggacgcccga
     1441 gcgcatcggc gccgacatcg gcttgacctc ggatctcggg cgaagcctct ccctctccgc
     1501 gcgggccttc ctccggagat tgcgcgggct ctcgctcgag cagcgcgagc tgcatttcgt
     1561 ggtcccgacg tcctcgttcg acgggccgac ggcgatcgtc cacggcgccg gtggtgagca
     1621 cgcgggggcg ggcgtcgagc tggcgggtcg cccgacccgg ggcgtcgagg tgcgagcctc
     1681 ctactgggtc cggggtgccg tcggtggcga caccgtgtat cggaatgcct gggccgccgt
     1741 cccgcaccat ggtgcccgcg ggacgatgga gtacgtcccg gttcccgggc tcgagctctg
     1801 gctgagcggt gcgtaccggg gtccgacgcg tcaccgcgag ctcacggcgg tcgagcgcga
     1861 gtcggccggg cgctaccggg agcggctgga cggcgccttc acggtggaca tcgccctgca
     1921 gaagcacctg tggaacggcc ggctccgcgc gcacgtcggc attcgcaacc tgctcggcgc
     1981 cgatctacgc taccacccga cgggcgcgac gttcggcccc accgcgatcg tgcatctggg
     2041 agcgacgctt ccctgagcgg ttggacggcg gttcaagcgg ctggtcggtc tggagccagc
     2101 gaaagggcga gcacgaggag ggtagcggcc agcaggatcc acgcctcggg cgagcccatg
     2161 gcgagcaggg tcgcgccgct caggaggcac caggcggcgg gagccgccag cagcgcccat
     2221 cgcgagcggg gcgacccctc gacgttcagc aggagcccca gcgtcccgag taccgtggga
     2281 tcgggggcga tcccgaagat ctcggcctgc gtccagccgc gcccgaccgc gggcgcgagc
     2341 aggggataga gcgcgagcga tccggcgaac agcgcgcccc cggtcagacc cgccgcatca
     2401 cctttccagc cgaaccgcat cctgccgccg gccgccccga gccagccgag cagcgcggcc
     2461 tgcagcccga agagccaggc agcgtaggtg gcggcccagt tgatcgccgc ataccgccgc
     2521 gcgacgaagg cccaccccac ccagacccag agcagtgcca gcagggccag agcggcgcgg
     2581 ctccgccggg gcgttggccg gcggaggagc gccgccatgg tgacaccgag cccgagcgtg
     2641 aggatctgcc cgggccacac ggcgagattg tgacgctcga tcaaccggta gtaggtgcga
     2701 ggcgaaaaca gcaggaaatc ggagagggag taagtccacc actcctgcat cagagccgct
     2761 cgacgtggtc cacgatccgc ttccgcatcg cctcgtcggg cagatcgcct gtggcggcgg
     2821 cgacgttctc cgccgcgtgg tccggcctgg tggtggccgg gatggcgcag gtcacagccg
     2881 ggtgggagag gatgaacttc agcaggagct gcgcccaggt ggcggcgccg acctcgcggg
     2941 cgaaggatgg caggggatgc cgctcgacct cgcgggtcag cgagccttgc cggaagggac
     3001 gattgaccag caccgcgatc ccccgctccc gggccagcgg gaggatggtg cgctccacat
     3061 cgcggtccag cacgttgtag gtcacctgga cgaagtcgat cggccgggtg gccatgattc
     3121 gctcgatctc gcggtggcgc cgcccctcgg aggtggtgat gccgacgtag cgcacccggc
     3181 cggcggcctt ccgctcgagc agtcgcggca ggtgctcctc ccacccgagc aggttgtgga
     3241 tctgcagtag atcgaaccgc ggcacgcccc agagggaccg ggactcctcg atctggcccg
     3301 gtcccgcctc gcccgatccg atccagacct tgtcggccga aaagacgtcg gcggtccggc
     3361 cgagcttcgt cagcccgtac ccgactaccc cctgggagct gccgtacatg ggcgaggaat
     3421 cgatcacccg gccaccggcg ccgaagaagg ccttcatcac ggcggccgct tcgtcgcgca
     3481 gcaccgggtc gtcacccacg ttgaaggtga tccaggtgcc gagccccacc acgggaagct
     3541 tctcgccggt cgaggggatg gcgcgggcga ggggcacggc cgcacccggg aggcgagcga
     3601 gcacatcgta cggccggagc agcgcggcgg ccgcgccggc ggcgagcgtg cggaccaccg
     3661 cacggcggtc gggccggccg gcgctcaaag cgccaccatc gggaactcgg gattcacgcc
     3721 aagatatacc tggcccacgg cctcgaaccg attctccgag agaaatccgt gatggcgcag
     3781 ggtctgcgcg tcgcggaagt gacgctcgag ggggctgcgg gtgtagatgc cggtggtccc
     3841 tgccagacgg tgcatcaggt cggtgacctt cgcggcggtc gtggcggcgt ggacgctggc
     3901 gagcagctgg tcggccttct gctccagggt gaaccgctcg ccccgcaccg cgcgcgcata
     3961 gcccgccacg agcgtgtcgt agaagaagag tcgggcggag cggagcatcg catccgcgcg
     4021 ggcgacgctc gcctgcactc cgttgcgctc gcggagcggc cggctgaacc ccagcgcggt
     4081 cttcttctgc gccagcgcct tcagctcggt gatgcccgcg cgggccaccg cgagcgacac
     4141 cggcgcgatg agaaagctcc ccgcggccac accgggcatc cggtagagcg gcccgcgatg
     4201 gtgcgcgccg ggctcgaaat cgggcgtgag cgggaacgtg cgggcgcgcg gcaccagcac
     4261 gtcctcgatg acgacgtcgt tgctgtcgct gccgcgcatg ccgagcgcgt accaggtgtc
     4321 cacgactttc acttccgcgc tccggagcat cagcccgagc acgatcggcg cgccgctcac
     4381 gatcctcgga tggtcgccgt ccatcaccag cgcggtgagg aagagccagt cggcgtcgtg
     4441 gatgttgctc gcaagcggcg cgcggccggt gatccggtag ccctccgccg tctccaccgc
     4501 ctgctgcggt ggatggaagg cggcggccat cacggcgctg gggttgtcgc ggtagatctc
     4561 ctcggcgcct tccgtgggaa ggcgcgccgc ccaccacgca ccctcgtttc cggcctggag
     4621 cgcccagccg gccgcgctgt cgaacccggc gatctcctcg acgatcagcg cgcaggtggc
     4681 cgggtccagc tccaggcccc cgagcgatgt cgggagcagc agacggaaga gcccggtctc
     4741 ccgcaggccg gcgatgactt cgggcgcgag acgccgccgc tgctcggcct gctccgcatg
     4801 cgcgcgcacc agcggaccga ggccgcgggc ccggtcgaga agctcctcgc gatcttgccg
     4861 acctgtcatg ggatcctccc tgtcaggcga cccgccccag catctcccac cagactcgac
     4921 ggatctcgct cgcgccgcgc gcgttgggct cgatcaggtt cctgctccag taccagcgct
     4981 ccggctcggg ggccttcaca ccatgtccga ggaagtgccc gtgtacatcg gcgagcagcg
     5041 tccgcggcag ggagccgctg gtcttccgga ccgtgtcgtt gaagcgctcg agctgctcca
     5101 gcggcaggcg tccgtagctc tccagccccg gcaggcgccc ggtgccgtcc gtaggatcgt
     5161 agacggtcgt caggatcagg gttgcacggg gcagctcttc gcgtacggtc tcgaccaggt
     5221 ccacgaaccg gcgcgaagcc agcgcgaccg cgctctcc
//
LOCUS       DASUYN010000582         2713 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1066202, whole genome shotgun sequence.
ACCESSION   DASUYN010000582 DASUYN010000000
VERSION     DASUYN010000582.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2713)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2713)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2713
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1066202"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1055
                     /gene="cax"
                     /locus_tag="VF061_11415"
     CDS             <1..1055
                     /gene="cax"
                     /locus_tag="VF061_11415"
                     /inference="COORDINATES: protein motif:HMM:TIGR00378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015368 - calcium:monoatomic cation
                     antiporter activity [Evidence IEA];
                     GO_process: GO:0006816 - calcium ion transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="calcium/proton exchanger"
                     /protein_id="HEX6670163.1"
                     /translation="TPRWRLLLLAAVPVSLLLGYVLHAPAVWVFLTACLGVLPLAGFM
                     GDATEHLAHRTGPTVGGLLNATFGNAAELIIALMALRAGLVDLVKASITGSILGNLLL
                     IMGLAIIAGGLNRSELRFNRTSAGMSAGMLALSVVALGFPALYHAVHPEAAARATELY
                     MSEAVAVILILTYGGSLLFTLRTHRTLFGGEAHPLDGPVWSARKALLVLAGATVGVAV
                     ESELLVHAATEATETLGLSPFFLGLIVIPIIGNAAEHAAAVVLSRKGQIDLGLQIALG
                     SSTQIALLVAPVLVFAGVLLGQDMNLVFTPFEVLALGMATGVTAIITLDGESHWFEGV
                     QLLAVYLMVAVGAFFL"
     gene            1116..2099
                     /locus_tag="VF061_11420"
     CDS             1116..2099
                     /locus_tag="VF061_11420"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HEX6670164.1"
                     /translation="MRTRPTILFYSPDGCPVPALVRQWAAANAFPLLVFSRADEVEAI
                     VLRGHPCMLFVDGNGARNEGVGLVRRLKSDAFTAIVPVTALAGDHHPEQVQAWFAAGA
                     DEVISSLFSPAEQRSRLDAMLVRTERDVSVHPSTRLPGTTEIEREIRRRLESDQEFAV
                     CYADLDHFKEFNDRYSYYDGDRVIYLLSRILHDVVKGLLGARGFVGHIGGDDFIFIVP
                     ATEIGPVCTEVLDVFDTLIPLQYNEQDRRAGYFFGKDRRGQLHRVPLMTLSIGIVTNR
                     HRKFAHPAQVSELATEMKSYAKTLPGSVFVVDRRQGSDGEDRQGAVARELP"
BASE COUNT          347 a         1008 c          919 g          439 t
ORIGIN      
        1 gcacgccgcg ctggcgcctc ctgctcctcg cggccgtccc cgtcagtctc ctcctcggct
       61 acgtgctgca cgccccggcc gtctgggtct tcctcacggc gtgcctcggg gtgctcccgc
      121 tggcggggtt catgggcgac gccaccgagc acctggccca ccgcaccggt ccgacggtcg
      181 gcggcctgct gaacgccacc ttcggcaacg ccgcggagct catcatcgcg ctgatggcgc
      241 tccgcgcggg actggtggac ctggtgaagg cctccatcac cggcagcatc ctcggcaacc
      301 tgctcctcat catggggctc gccatcatcg ccggcgggct caatcgctcg gagctgcggt
      361 tcaaccgcac cagcgcgggg atgagtgccg gcatgctggc gctctcggtc gtggcgctgg
      421 gcttcccggc gctctaccac gcggtacatc ccgaggccgc ggcccgtgcc accgagctgt
      481 acatgtccga ggccgtggcc gtgatcctga ttctcaccta cggcggctcg ctgctgttca
      541 ccttgcgcac ccatcgtacg ctcttcggcg gtgaggcgca cccgctcgac gggccggtct
      601 ggagcgcgcg caaggcgctg ctggtgctgg cgggagccac ggtgggcgtg gcggtcgagt
      661 ccgagctgct ggtgcacgcc gcgaccgaag ccaccgagac gctgggcctc tcgcccttct
      721 tcctcggcct gatcgtcatc cccatcatcg gcaacgcggc cgagcacgcg gcggcggtcg
      781 tgctctcccg caagggacag atcgacctgg gactccagat cgccctgggc tcgagcaccc
      841 agatcgccct cctggtggcc ccggtcctgg tcttcgcggg ggtgctgctg ggccaggaca
      901 tgaacctggt gttcaccccg ttcgaggtgc tggcgctcgg gatggcgacg ggggtgaccg
      961 cgatcatcac gctggacgga gaatcccact ggttcgaggg ggtgcagctg ttggcggtct
     1021 acctgatggt cgccgtgggt gcgttcttcc tctgattgac ttgtgggagc ctgagcccta
     1081 agttagctag ttgtaacttc ttacgagagg ccagggtgcg gactcgcccg acgattctct
     1141 tctactcgcc ggacggctgc ccggtgccgg ctctggtccg ccagtgggcc gcggccaacg
     1201 cgtttccgct gctggtcttc agccgcgccg acgaagtgga agcgatcgtg ctccggggcc
     1261 acccctgcat gctcttcgtg gatggcaacg gggcccgcaa tgagggcgtc gggctggtcc
     1321 gccggctcaa gagcgacgcc ttcaccgcca tcgtccccgt caccgccctg gccggggatc
     1381 atcatccgga acaggtgcag gcttggttcg ccgctggcgc cgacgaggtg atcagcagcc
     1441 tcttctctcc cgcggagcag cgctcccggc tcgacgcgat gctggtgcgc accgagcggg
     1501 acgtctccgt gcatccctcc acccggctgc cgggcaccac cgagatcgag cgagagatcc
     1561 gccgccggct cgagtcggat caggagttcg cggtctgcta tgcggacctc gatcacttca
     1621 aggaattcaa cgaccgctac agctactacg acggtgatcg cgtcatctac ctgctctccc
     1681 ggattctgca cgacgtggtg aaggggctgc tgggcgcccg cggcttcgtg ggccacatcg
     1741 gcggcgacga cttcatcttc atcgtgcccg ccaccgagat cggtccggtg tgcaccgagg
     1801 tactcgacgt gttcgacacc ctgatcccgc tgcagtacaa cgagcaggac cggcgggcgg
     1861 gatacttctt cggcaaggat cggcgcgggc agctgcaccg ggtcccgctg atgacgctct
     1921 cgatcggtat cgtcaccaac cggcaccgca agtttgcgca tccggcccag gtgagcgagc
     1981 ttgccaccga gatgaagagc tacgccaaga cgctgccggg gtcggtgttc gtcgtggatc
     2041 gccgccaggg ctccgacggc gaggatcgcc agggagcggt ggcccgagaa ctgccgtgag
     2101 gacgagccca tgaacgtcac ctgtcccaat tgcgcgaccc tgtatcgtgt ggatccggcc
     2161 aaggtgcccg aagccggcgt gcgcgcccgc tgcgcggtgt gcagcgccgt gttcccggta
     2221 agccgggagc agcagcgagg ggccgggacc ccggtggaag cgacggtgtc ggccgccgcc
     2281 ggcgctccgg cgcgccatgc cgacacgtcg gcgcaagtga cgggggccgc gccgtccccg
     2341 ccgccggtcg caccgtccgc ggcatcgcca cccccgccgg ccccgccgtc aatgcggccg
     2401 gcggcggccg ctccggcgcc gtccgcctct ccgcctggcg cccaaccccg gccgctcgcg
     2461 cccccggcga ccaggccggt cgcacctccg ccgaccgggg cacccggcgg gttctcgtcc
     2521 cgacccgcgg ctccgccggc ggcccagcgg ccggtggctt ccccggcacc cgcggctccg
     2581 ccggcgggtg ctccgtcggc gcccgccccg gccccggtgg ccaggcccgg acctgccgcc
     2641 gccgggcccg gcagtcgacc cgccaacccg ttcctctccc aggacccctc ggccaaggcc
     2701 cggcggctcg ccc
//
LOCUS       DASUYN010000583         2907 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1066644, whole genome shotgun sequence.
ACCESSION   DASUYN010000583 DASUYN010000000
VERSION     DASUYN010000583.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2907)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2907)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2907
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1066644"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1502
                     /locus_tag="VF061_11425"
     CDS             <1..1502
                     /locus_tag="VF061_11425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670165.1"
                     /translation="GREIHFYEGYWAPLTEGEVTLRDVSRFLLRAGINGIVNSSTSFS
                     RWIFGRWQAYDIPVRTWAYLVVALATIASLAVMNGVVLLVSAARAPLGSTPPDWLSDA
                     LFCDLTTTLNVFLVTATVWLLMLAGSRLTRRGGLRPLGALFRPLSVLTFATTLLAAVL
                     AGLALPLLILSHVQHGGSWASGQPRWSSWLGAERAAAFDELCTAIFLAIPIVVLAYAL
                     ASWAWKFLRAAGSQILTRRPGQQPFLTLIVLGALVAGTALIGLEVLLLWPGTGSENHW
                     PLRLLVTWAVVLLLSEVVRRFLVQYLGDVVVYVESHTVDRFADLRARIRDCVSERARA
                     VYGAEGADAYERVLVVGHSLGSVVSYDMLNQLLCEDAIDRQAGRPTRDVARRTPLFLT
                     FGSPLDKTTFVFAIQHRRTSQAREALVASAQPMLQGYEWRPQRWVNIYSPWDLISGSL
                     EYFDLPGSSDPRRVTNLRDGEATTLLMSHVEYWETGLLPQVLSEALTAA"
     gene            1606..2436
                     /locus_tag="VF061_11430"
     CDS             1606..2436
                     /locus_tag="VF061_11430"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX6670166.1"
                     /translation="MAVLQQRQPPVSDGLNERVRATWTAGDFGRIAVSYERGAAEFVE
                     RLGLRSGERVLDVACGTGNLSLPAARAGASVTGIDIAPDLVAQLAARAAGEGLVLDAR
                     EGDAEALPFGDASFETTISMFGAMFAAHPQAAADEILRVTRPGGRIALASWTPASFIG
                     GMLKLTVAYVPPPAGMPSVLLWGDPDTVRERLGAGVTELRFARRPMPFAFPFGPRDTV
                     ALFRTWYGPTVRAFAALDEEKRERLFGELVQHWTDHNTAGPDATRVESEFLEVTAIRV
                     "
     gene            complement(2470..>2907)
                     /locus_tag="VF061_11435"
     CDS             complement(2470..>2907)
                     /locus_tag="VF061_11435"
                     /inference="COORDINATES: protein motif:HMM:NF014731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KUP/HAK/KT family potassium transporter"
                     /protein_id="HEX6670167.1"
                     /translation="VYAVADPSTVPQALLHNLKHNQVLHERVVLLAVETEEVPHVDPD
                     ERVSLEHLGQGFHRVIMRFGFMEEPDVPAGLGALRPHGLEFKPLETTYFLSRETLLRA
                     RASRMAAWRRNLFAVMARNARTASSFFQLPPNRVVELGAQIEL"
BASE COUNT          366 a         1035 c         1044 g          462 t
ORIGIN      
        1 acggccggga gattcacttc tacgaggggt actgggcgcc gctcaccgaa ggtgaagtca
       61 ccctgcggga cgtctcgcgc ttcctgctgc gggcggggat caacgggatc gtgaacagca
      121 gcaccagctt ctcgcgctgg atcttcggtc gctggcaggc ctacgacatc ccggtccgaa
      181 cctgggccta cctcgtcgtg gcgctcgcga ccatcgcctc gctggcggtg atgaacgggg
      241 tcgtcctcct ggtgagcgcg gcccgcgctc ccctggggag cacgccgccg gactggctca
      301 gcgacgcgct gttctgcgat ctcaccacga cgctcaacgt cttcctcgtc accgccacgg
      361 tgtggctgct gatgctggcc gggtcgcggc tcacccgccg gggcgggctg cggccgctcg
      421 gagcactgtt ccgtccgctg agcgtgctca ccttcgcgac caccctcctg gcggccgtgc
      481 tcgccgggct ggcgctcccg ctgctgatcc tctcccacgt gcagcacggc ggctcctggg
      541 cctccggcca gccccgctgg agcagctggc tcggggcgga gcgggcggcc gccttcgacg
      601 agctctgtac cgccatcttc ctggcgattc cgatcgtcgt gctggcgtac gcgctggcct
      661 cctgggcctg gaagttcctc cgcgcggcgg gctcccagat cctgacccgc cggcccgggc
      721 agcagccgtt cctgacgctg atcgtgctgg gcgcgctggt ggcgggcacg gcgctcatcg
      781 ggctcgaggt gctgctgctc tggccgggca ccgggagcga gaaccattgg ccgttgcgcc
      841 tgctggtgac ctgggccgtc gtgctgctcc tgagcgaggt ggtgcggcgg ttcctggtgc
      901 agtacctcgg cgacgtggtg gtctacgtgg agtcccacac cgtggaccgg ttcgccgatc
      961 tgcgggcccg gatccgcgac tgcgtctccg agcgcgcgcg cgcggtctac ggcgcggagg
     1021 gcgccgacgc ctacgagcgg gtgctggtcg tcggccactc gctcggctcg gtggtgagct
     1081 acgacatgct gaaccagctc ctctgcgagg acgcgatcga ccggcaggcg gggcggccca
     1141 cgcgcgacgt cgcccgccgc acgcccctgt tcctcacctt cgggtcgccg ctggacaaga
     1201 ccaccttcgt gttcgccatc cagcaccgcc ggacgtcgca ggcgcgggaa gcgctggtcg
     1261 cctcggcgca gccgatgctt cagggctacg agtggcggcc ccagcgctgg gtcaacatct
     1321 actcgccgtg ggacctcatc agcgggtcgc tggagtactt cgatctgccc ggatcgtcgg
     1381 acccgcggcg ggtgaccaac ctgcgcgacg gggaggcgac cacgctgctc atgtcgcacg
     1441 tggaatactg ggagaccggg ctgctgcccc aggtgttgtc ggaggccctg acggccgcct
     1501 gaccgggtgt ccggtcctgg cggctcccgg cgcaacaggg gtacgggccg gtggattccg
     1561 tccgccggcc gcccatcagg cgtacccaac gggagatcac cgaccatggc agtccttcag
     1621 cagcggcagc ccccggtttc ggacgggttg aacgagcgcg tgcgcgccac ctggacggcc
     1681 ggcgatttcg ggcggatcgc ggtcagctac gagcgcgggg cggcggagtt cgtggagcgc
     1741 ctcggcctca ggtcgggcga gcgagtgctc gacgtggcct gcggtaccgg caacctcagc
     1801 cttcccgcgg ccagggccgg cgccagcgtg acgggcatcg atatcgcgcc ggacctggtc
     1861 gcgcagctgg ccgcccgcgc ggccggggag gggctggtgc tcgacgcgcg cgaaggcgac
     1921 gccgaggcgc tccccttcgg ggacgccagc ttcgagacca ccatctccat gttcggcgcg
     1981 atgttcgccg cccaccccca ggcggccgcg gacgagatcc tgcgggtgac ccgccctggc
     2041 gggcgcatcg ccctcgcgag ctggaccccc gcgagcttca tcggagggat gctgaagctg
     2101 accgtcgcct acgtgccgcc gccggcgggg atgccctcgg tcctgctgtg gggcgacccg
     2161 gacaccgtcc gcgagcggct cggcgccggc gtcaccgagc tgcgcttcgc gcggcgcccg
     2221 atgccgttcg cgttcccctt cggcccccgg gacacggtgg cgctcttccg aacctggtac
     2281 ggcccgacgg tgcgcgcgtt cgccgccctg gacgaggaga agcgcgagcg gctgttcggt
     2341 gagctggtgc agcactggac cgaccacaac accgcgggtc cggacgccac ccgcgtcgag
     2401 tcggagtttc tcgaggtcac ggcgattcgc gtctgagcga tgtccggccc ggtcgccatg
     2461 accgggccat cagagctcga tctgggcccc gagctcgacg acgcgattgg gtggtagctg
     2521 gaaaaaggag ctcgcggtcc gcgcgttgcg cgccatgacc gcgaagaggt tgcggcgcca
     2581 ggccgccatc cgcgaggctc gggcccgcag cagtgtctcc cggctcagga aataggtggt
     2641 ctcgagcggc ttgaactcca ggccgtgggg acgcagcgcg ccgaggccgg ccggtacgtc
     2701 cggctcttcc atgaagccga atcgcatgat cacccgatgg aacccctggc cgaggtgctc
     2761 cagggagacg cgctcgtcgg gatccacgtg ggggacctcc tccgtttcca ccgccagcag
     2821 taccacccgc tcgtgcagca cctggttgtg cttcaggttg tgcagcagcg cctgcggcac
     2881 ggtgctcggg tcggccaccg cgtagac
//
LOCUS       DASUYN010000584         9030 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_183311, whole genome shotgun sequence.
ACCESSION   DASUYN010000584 DASUYN010000000
VERSION     DASUYN010000584.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9030
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183311"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..791
                     /locus_tag="VF061_11440"
     CDS             <1..791
                     /locus_tag="VF061_11440"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX6670168.1"
                     /translation="HVFHPGTANEVRALESVDLELARGSFTAVLGTNGSGKSTLLGAI
                     AGSLGRIGGKVFLEGREVTGWPEHRRAGLIGRVFQNPFTGTASELSVAENLALAGRRG
                     GPRWLRPALGAERRRAIREQVARLGMGLEHRLDTPIGLLSGGQRQALTVLMATVRRPS
                     LLLLDEHTAALDPRSAEQVIGLTRDVVRSEGLTTLMVTHSMAQAVRLGDRVLVMHQGR
                     LAYDLVEVRREHLAESDLLQLFDQLRWADRLDESAAEMLRRSYV"
     gene            794..1648
                     /locus_tag="VF061_11445"
     CDS             794..1648
                     /locus_tag="VF061_11445"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX6670169.1"
                     /translation="MSEERVVGGDARAVLAEALGDRYALERELGQGGMATVYLARDLA
                     RSERVAIKVMDPHLADALDRKRFRREMGLAAALTHPLIVPLYDSGSAGALLYYIMPYV
                     EGETLYQRLQRERRLPLDAALRVTRDVAAALGYAHGRGVLHRDVKPENVLLAGGHAMI
                     ADFGLARAIGAADYTKLTETGVVVGTLYYMSPEQLKEEPDLDQRSDVYSVGCILYEML
                     SGGPPHTGRSLTEVAGRILRGSAPSIRDLRPEVPPGVDAAIRRALEKAPAERFASMEE
                     FAAALPSP"
     gene            complement(1770..4580)
                     /locus_tag="VF061_11450"
     CDS             complement(1770..4580)
                     /locus_tag="VF061_11450"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003994 - aconitate hydratase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase"
                     /protein_id="HEX6670170.1"
                     /translation="MPADTINPFGSRATLKLGDDSATVYRLPELARQGVAELDRLPFS
                     IRILLENVLRHAGRGVVTEDHVRQLGGWHRDGAPRTEIPFMPARVVLQDFTGVPCVVD
                     LAAMRDAMARMEGDPDKINPVVPCDLVIDHSVQVDHYGSENAFRLNVQLEMERNVERY
                     QLLKFAQRAFHNFRVVPPGTGIVHQVNLEYLAPVVQLREQFGEPTAYPDTLVGTDSHT
                     TMINGLGVMGWGVGGIEAEAVMLGQPYFMLIPEVVGMKLTGALPVGTTATDLVLTATQ
                     MLRKKGVVDKFVEFYGPGLSSLGLADRATIGNMAPEYGATMGFFPVDAETLRYLGRTG
                     RSRAVVERVERYCKEQGLFRTDTTPDPVFSITLDLDLSTIVPSLAGPKRPQDRVPLTD
                     LKRNFVVNLPGLMSPTVPAARKELAEAAYSRWVGEGGANVTIGDHGAEFEEALDPDAP
                     PVVTGVLEGNDISLHDGAVVIAAITSCTNTSNPSVMIGAGLLAKKAVERGLETQPWVK
                     SSLAPGSRVVTDYLEGSGLLPYLDRLRFNVVGYGCTTCIGNSGPLPEVIAGLIDEHSL
                     VTAAVLSGNRNFEARVHPQVRANYLASPMLVVAFALAGRVDVDLTREPLGVSRDGTPV
                     FLRDIWPSAEEIQATMAASLKPELFERRYASVFEGDETWRGLKVPDGSRYAWDAGSTY
                     VQEPPFFVDLPPAPPPLRDIAGARALAVLGDSVTTDHISPAGSIPKNGPAARYLREHG
                     VEQVDWNTFGSRRGNHEVMMRGTFGNVRISNALVPGKEGNWTLHFPSGEVVSIYDAAM
                     RYQAEGTPLVILTGKEYGTGSSRDWAAKGPSLLGVRAVIAESYERIHRSNLVGMGVLP
                     LAYEPGANRQSLGLTGRETFSISGIASGLAPGGRVTVTARDDAGKETVFPAVVRLNSA
                     VELDYYRHGGILQRVLRQFMDR"
     gene            4656..4994
                     /locus_tag="VF061_11455"
     CDS             4656..4994
                     /locus_tag="VF061_11455"
                     /inference="COORDINATES: protein motif:HMM:NF017922.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF971 domain-containing protein"
                     /protein_id="HEX6670171.1"
                     /translation="MSLPIPHAINRRDDGLLIEWDETGHEALYPARALRLACPCAACV
                     DEMSGRPLLDPAGVPQDVRPLSLALVGAYGLRVQWSDGHGTGIYTFQRLLASCPCDAC
                     RAASGGRPLP"
     gene            5077..5604
                     /locus_tag="VF061_11460"
     CDS             5077..5604
                     /locus_tag="VF061_11460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670172.1"
                     /translation="MSAREHSVVREGTVTGLLGAVIVAAWYFVFDMAQGRPFRTPNVL
                     GKLFFRGDLQPGAREIVPEIVAGFTLLHLLMFALVGMGLTLLIHLATRNLGLRMGVWI
                     GLVVAFCFFAGLTYMAHTATDERVPLWSVVGGTLTSVVAMAWYLVRRHPGIRSEAQLG
                     DEVRSPPHPPGSPRA"
     gene            5678..6184
                     /locus_tag="VF061_11465"
     CDS             5678..6184
                     /locus_tag="VF061_11465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670173.1"
                     /translation="MAERSHSIPVEGTDVGVIGGLAVALWFLVLDTIAGRPLLTPSLL
                     GQVVLMGDPTPDSGSVIFGAILLYTAFHFIVFALLGMGLVAVVHWGTENSVVRYALLP
                     IFLAFEVIFYGLLEVLSERTGELFPFWAVVSANTLAAVSMGLYLWIRHPAFRRSIQDT
                     PLGAAPLH"
     gene            6257..8980
                     /locus_tag="VF061_11470"
     CDS             6257..8980
                     /locus_tag="VF061_11470"
                     /EC_number="3.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019213 - deacetylase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PIG-L family deacetylase"
                     /protein_id="HEX6670174.1"
                     /translation="MRLALTRILASFIALLPLLTGSLPAQLEPPGTGGVVALDQELRM
                     LGHYRRVLMIGAHPDDEDTELLTVLVRGMGAEAAYLSLTRGEGGQNLIGPELGEALGL
                     IRTEELLAARRLDGARQYFTRAYDFGYSKSLDETWEHWPRDTVLKDVVRIVRRFRPQI
                     IVSIFSGTAKDGHGQHQAAGWAAQEAFAAAGDTTRFPELAREEGLRPWLPLKLYRATW
                     YDTTATTLTLDGGVLDRAVGKSYHQIAMASRSLHRSQDMGRLQEIGPSLVRLALLEDR
                     TAEGSAGLFDGIDTSLAAMPWRDAPGTDGPAARRRFAARADSARIALGTGAFDRVITL
                     LDRGKRDLSPQSNDSRAQMLFSTPEQGDQRRHTERALAVAAGLVADALAHDDRVIGGQ
                     PDSVDLLVWNAGHDSMTVTGGLVPSAEWNVQADSNGEISLAPGEVHRSVALLAPDTGA
                     VATTPYFLRRPRQGAIYDWAGAAASDLGEPFGGSSPAARFGRLGPGGETSREVSYRLN
                     DQGLGEVRRPVIVVPRVDVKLDPSTYVWSLLTPSTHRFTVTLTHGAPDTTTGTVGLEV
                     PEGWPAVRPQAFRLTGEDEREAFTFDVRTPRGMERGSATIRAVARDSGGREYSGGVVT
                     VTYPHIRSRSYLVPATSEVRLAPVALPTLARVGYVRGASDVVPEALQQAGLPVTLLDA
                     GALERADLTLYPVIVIGPRAYETDSALVENNARLLSYVRGGGVLIVQYQQHRFFTGGF
                     APLPMTVGGPPLPTAGDTLHASAGTDGDPATDSTATDSSATDSSATDSTARPLSHDRV
                     VDETAPVTILESDHPVLRRPNRISERDWEGWIQERGLYFARTWDPAYQPILETHDEGE
                     AELRGGLLIAPVGRGTYVYTGLSFFRQLPAGVPGALRLFVNLLALGRPPTR"
BASE COUNT         1253 a         3222 c         3186 g         1369 t
ORIGIN      
        1 cccacgtgtt tcatcccggc acggcgaacg aagtgcgggc gctcgagtcg gtggatctgg
       61 agctggcgcg gggcagcttc accgcggtgc tgggcaccaa cggatcgggg aagtcgacgc
      121 tgctcggcgc cattgccgga agtctgggcc gcatcggcgg gaaggtgttc ctggaaggcc
      181 gcgaggtcac cggctggccg gagcaccgcc gcgccgggct gatcgggcgg gtgttccaga
      241 atccgttcac cgggacggcc tccgagttga gcgtcgccga aaacctggcg ctcgccggac
      301 ggcgcggtgg cccgcggtgg cttcgtccgg cgctgggcgc cgagcgccgc cgggcgatcc
      361 gcgaacaggt cgcccgcctg gggatgggtc tcgagcaccg tctcgacacc ccgatcggcc
      421 tgctgtcggg cggccagcgc caggcgctca ccgtgctcat ggccacggtg cgccggccca
      481 gtctcctgct gctggacgag cacaccgccg cgctggatcc ccgcagcgcc gagcaggtca
      541 tcggcctgac ccgcgacgtc gtccggagcg agggactcac cacgctgatg gtcacccatt
      601 cgatggcgca ggcggtgcgg ctcggcgacc gggtgctggt catgcatcag ggccggctgg
      661 cctacgacct ggtcgaggtt cgacgggagc atctggccga gagcgacctg ctgcagctct
      721 tcgatcagct caggtgggcc gaccggctgg atgagtccgc cgccgagatg ctccgccggt
      781 cgtacgtgta gccgtgtcgg aagagagggt ggtgggcggc gacgcgcgcg cggtcctggc
      841 cgaagctctc ggcgaccgat atgcgctgga gcgggagctg ggccagggcg gcatggcgac
      901 cgtttacctc gcgcgcgacc tcgcccgctc ggagcgggtg gccatcaagg tcatggatcc
      961 gcacctggcc gatgccctcg accgcaagcg gtttcgccgc gagatgggtc tcgccgcggc
     1021 gctgacccat cctctcatcg ttccgctcta cgactcgggc agcgcgggcg cgctcctgta
     1081 ttacatcatg ccgtacgtcg agggtgagac gttgtaccag cggctccagc gggagcggcg
     1141 tctccccctg gatgccgcgc tccgggtgac ccgcgacgtc gccgccgccc tgggctacgc
     1201 gcacggacga ggcgtgttgc accgcgacgt gaagcccgag aacgtcctcc tcgcgggcgg
     1261 tcacgcgatg atcgcggact tcgggctggc ccgcgcgatc ggcgcggccg actacaccaa
     1321 gctcacggag acgggcgtgg tggtcggaac cctgtattac atgagcccgg agcagctcaa
     1381 ggaggagccc gacctcgacc agcggtcgga cgtctacagc gtgggatgca tcctgtacga
     1441 gatgctctcg ggtggtccgc cgcacaccgg ccggtcgctc accgaggtcg cgggccggat
     1501 cctgcgtggc tcggcgccct caatccgcga cttgcggccg gaggtcccgc ccggcgtcga
     1561 tgcggcgatc cggcgggcgc tcgagaaggc gcctgccgag cggttcgcga gcatggagga
     1621 gttcgcggcc gcgctgccgt ccccctaggt cgccgagaac cgcatccgct ccagcagcct
     1681 cccaaagtct cgccgctccc gcagcgcatc acccgggatc gagatcgatg cgaagcgcga
     1741 ccggcaggtc cgccaggggc gcctccgcgc tagcgatcca tgaactggcg cagcacgcgc
     1801 tgcaggatgc cgccgtgccg gtagtagtcc agctccacgg ccgagttgag acgcacgacc
     1861 gccggaaaga cggtctcctt gccggcgtcg tcacgggccg tgacggtgac ccgaccgccg
     1921 ggcgcgaggc cggacgcgat gcccgagatc gagaacgtct cccgccccgt gagccccagc
     1981 gactggcggt tggcgcccgg ctcgtaggcc aatggcagca cgcccatgcc caccagattg
     2041 ctccggtgga tgcgctcgta gctctcggcg atgaccgccc ggacccccag cagggatggc
     2101 cccttcgcgg cccagtcgcg gctcgagccg gtgccgtact ccttgccggt gaggatgacc
     2161 agcggggtgc cttccgcctg gtaccgcatc gcggcatcgt agatcgacac cacctccccg
     2221 ctggggaagt gaagggtcca gttgccctcc ttccccggca ccagcgcgtt gctgatccgc
     2281 acgttgccga aggtcccccg catcatcact tcgtggttcc cccggcggga gccgaaggtg
     2341 ttccagtcca cctgctccac gccgtgctcg cgcaggtacc gcgcggcggg tccgttcttg
     2401 gggatggacc ccgcgggcga gatgtggtcg gtcgtcaccg agtcgcccag gacggcgagc
     2461 gcgcgggcgc ccgcgatgtc gcgcagcggc ggcggcgccg gcggcaggtc gacgaagaag
     2521 ggcggctcct ggacgtaggt ggaccccgca tcccaggcgt agcggctccc gtcgggcacc
     2581 ttcaggcccc tccaggtctc gtcgccctcg aacaccgagg cgtagcgccg ctcgaagagc
     2641 tccggcttga gggaggcggc catggtggcc tggatctcct cggccgaggg ccagatgtcg
     2701 cggaggaaga ccggcgtgcc gtcgcggctc accccgagcg gctcgcgggt gaggtcgacg
     2761 tccacccggc cggcgagcgc gaaggcgacc accagcatcg gcgaggccag gtagttcgcg
     2821 cggacctgcg ggtggacccg ggcctcgaag ttccggttgc cgctcaggac ggcggcggtg
     2881 accagcgagt gctcgtcgat cagtccggcg atcacctcgg gcagcggccc gctgttgccg
     2941 atgcaggtgg tgcagccgta ccccacgaca ttgaaccgca gccggtcgag atacggcagc
     3001 agcccggagc cctcgaggta gtcggtcacc acccgcgagc cgggcgcgag gctgctcttg
     3061 acccagggct gggtctccag gccgcgctcc accgccttct tcgccagcag cccagcgccg
     3121 atcatgaccg acgggttcga cgtgttggtg cagctggtga tcgcggcgat gaccacggcg
     3181 ccgtcgtgga gcgagatgtc gttcccctcc agcaccccgg tcacgacggg aggcgcgtcg
     3241 gggtcgagtg cctcctcgaa ttcggccccg tggtcgccga tggtgacgtt ggccccgccc
     3301 tcgccgaccc agcgcgagta cgcggcctcc gccagctcct tccgggcggc cggcaccgtc
     3361 gggctcatga ggccaggcag gttcacgacg aagttgcgct tgaggtccgt gagcggaacc
     3421 cgatcctggg gccgcttggg gccggcgagg ctgggcacga tcgtggagag gtccaggtcc
     3481 agcgtgatgc tgaacaccgg atcgggggtg gtgtcggtgc ggaagagccc ctgctccttg
     3541 cagtagcgct ccacccgttc gaccacggcg cggctgcgtc cggtccgccc caggtagcgc
     3601 agcgtctccg cgtccaccgg gaagaagccc atcgtggcgc catactccgg ggccatgttg
     3661 ccgatcgtcg cccggtccgc caaccccagg ctcgagaggc ccggtccgta gaactccacg
     3721 aacttgtcca ccacgccctt cttgcggagc atctgggtcg cggtgagcac gaggtcggtg
     3781 gcggtggtgc cgaccggaag ggcgccggtg agcttcatcc cgaccacctc gggaatcagc
     3841 atgaagtagg gctggcccag catcaccgcc tcggcctcga tcccgccaac gccccagccc
     3901 atcacgccca gcccgttgat catcgtggtg tgggagtcgg tcccgacgag ggtgtcgggg
     3961 taggcggtcg gctcgccgaa ctgctcccgg agctgcacca ctggcgccag gtactccagg
     4021 ttcacctggt gcacgatgcc ggtgcccggc ggcacgaccc ggaagttgtg gaaggcgcgc
     4081 tgggcgaact tgagcagctg gtagcgctcg acgttccgct ccatctcgag ctgcacgttc
     4141 agccggaagg cgttctccga cccgtaatgg tccacctgca ccgagtggtc gatgaccaga
     4201 tcgcagggca ccaccgggtt gatcttgtcg gggtcgccct ccatccgtgc catcgcatcg
     4261 cgcatcgccg cgaggtccac cacgcagggc acgccggtga agtcctggag gaccacccgc
     4321 gcgggcatga acgggatctc ggtgcgcgga gcaccgtcac ggtgccagcc gccgagctgc
     4381 cgcacgtggt cttcggtgac gacgccgcgc ccggcgtggc gaagcacgtt ctcgagcagg
     4441 atccgaatgg agaaggggag gcggtcgagc tccgccacgc cctggcgggc gagctcgggg
     4501 agtcggtaga cggtggcgct gtcgtccccc agcttcaggg tcgcgcggga gccgaacgga
     4561 ttgatcgtgt cagcgggcat cgggggtccg gatcgggttg tctggtggca atatagtgcg
     4621 agtgggtccg ccggtccgcc attatcctcc actccatgtc cctccccatc ccccacgcca
     4681 tcaaccgccg ggacgacggc ctcctgatcg agtgggacga gaccgggcac gaggccctct
     4741 accccgcccg cgccctccgc ctggcctgtc cctgcgccgc ctgcgtggac gagatgagcg
     4801 gccggccgct gctcgatcct gccggggtac cccaggacgt ccgtcccctc tcgctcgcgc
     4861 tggtcggcgc gtatggactc cgggtgcagt ggagcgacgg acacggcacc ggcatctaca
     4921 cgttccagcg gctgctggcc tcatgtccct gcgacgcctg ccgcgcggca agcgggggcc
     4981 gtcccctccc gtgacgccgg acacatcccc tctcccgggc cgatcctaag ctgagcagcc
     5041 ggttacaatc ggcgttcacc ctcacccgga gctggcatga gcgcgcggga acactcggtg
     5101 gtacgcgaag gcaccgtcac cgggctcctg ggcgcggtga tcgtcgcggc gtggtatttc
     5161 gtcttcgaca tggcgcaggg ccgcccgttc cgcacgccga acgtgttggg caaactgttc
     5221 tttcgcggcg acctccagcc gggcgcccgg gagatcgtcc cggagatcgt ggcgggcttt
     5281 accctccttc acctgctgat gttcgccctg gtgggaatgg gcctgaccct gttgatccac
     5341 ctggcgaccc ggaacctggg gctccgcatg ggggtgtgga tcgggctcgt ggtcgctttc
     5401 tgcttcttcg ccggactgac ctacatggcg cacaccgcca ccgacgagcg ggtgccgctc
     5461 tggtcggtgg tcgggggaac cctgacctcc gtcgtcgcca tggcctggta tctggtgcgc
     5521 cgccatcccg ggatccgatc cgaggcgcaa ctgggcgacg aggtgcgctc gccgccgcac
     5581 ccccccggca gtccgcgggc ctgagctgaa aaccgacttg cgcttccgcg atatccgccc
     5641 cactgtggag tggtaggccc tggcgcagga ggctcgcatg gctgaacgtt cccactcgat
     5701 ccctgtcgaa ggcaccgacg tcggcgtgat cggcggtctc gccgtcgcgc tctggttcct
     5761 cgtgctcgac accatcgccg gccggccgct gctcacgccc agcctgctgg gccaggtggt
     5821 gctcatgggc gacccgacgc ccgacagcgg ctcggtcatc ttcggcgcca tcctgctcta
     5881 caccgccttc cacttcatcg tgttcgccct cctgggcatg gggctggtcg cggtggtgca
     5941 ctggggcacc gagaactcgg tggtccgcta cgcgctgctg cccatctttc tggccttcga
     6001 ggtgatcttc tacgggctcc tcgaggtgtt gtcggagcgc acgggggaac tgttcccctt
     6061 ctgggccgtg gtctcggcca acacgctggc cgccgtcagc atgggcctgt atctctggat
     6121 ccggcacccc gccttccggc ggtccattca ggacaccccc ctgggagccg cgccgctgca
     6181 ctgacgtcgg cttagaatcc cgccccggga ccgtgtagct ttccggcact cacacccaca
     6241 cggctccggg gactctttgc gcctcgcact cacccgcatt ctcgcttcct tcatcgcgct
     6301 gctcccgctc ctgacgggct cgctgcctgc ccagctggag ccgcccggca ccggcggggt
     6361 cgtggccctg gaccaggagc tccggatgct ggggcactat cgccgggtgc tgatgatcgg
     6421 cgcccatccc gatgacgagg acaccgagct cctgacggtg ctggtgcgcg gcatgggagc
     6481 ggaggccgcc tacctgtcgc tcacccgggg cgaaggaggc cagaacctca tcggaccgga
     6541 gttgggggaa gccctcggcc tgattcgcac cgaggagctg ctcgccgccc gccgcctcga
     6601 cggtgcccgg cagtacttca ccagggccta cgacttcggc tactccaaat cgctcgacga
     6661 gacctgggag cactggcccc gggacaccgt cctcaaggac gtcgtgcgga tcgtgcggcg
     6721 gttccgaccc cagatcatcg tctcgatctt cagcggcacg gcgaaggacg gccatggcca
     6781 gcaccaggcg gcggggtggg ccgcgcagga ggcgttcgcc gcggccggcg acacgacgcg
     6841 cttcccggag ctcgcccgtg aggaagggct ccggccgtgg ctcccgctca agctctaccg
     6901 cgccacctgg tacgacacga cggcgacgac gctcaccctg gacgggggcg tgctcgaccg
     6961 ggcggtgggg aagtcctacc atcagatcgc gatggcgagc cggagcctgc atcggtcgca
     7021 ggacatggga cggctccagg agatcggtcc ctcgctggtg cgcctggccc tgctggagga
     7081 ccgcaccgcc gaagggagcg ccggcctgtt cgacgggatc gacacctcgc tcgccgcgat
     7141 gccgtggcgg gatgcgcccg gcaccgacgg cccggcggcc cggcggcggt tcgccgcccg
     7201 ggcggacagc gcccgcatcg cgctcgggac cggcgccttc gaccgggtga tcacgctgct
     7261 ggaccggggc aagcgcgatc tctcgccgca gtcgaacgac agccgcgcgc agatgctgtt
     7321 ctcgaccccg gagcagggcg accagcggcg ccacaccgag cgcgcactcg ccgtggcggc
     7381 gggactggtg gccgacgccc tcgcgcacga cgaccgggtg atcggaggcc aacccgacag
     7441 cgtcgacctc ctggtgtgga acgccggaca cgactcgatg acggtgaccg gcggcctggt
     7501 gccgtccgcg gagtggaacg tccaggccga ctccaacggg gagatctcgc tcgccccggg
     7561 cgaggtgcac cgctccgtcg ccctgctggc cccggatacc ggcgcggtgg cgacgacgcc
     7621 ctacttcctg cgccggccgc ggcagggcgc catctacgac tgggccggcg cggcggcgag
     7681 cgacctgggc gagccgttcg gcggctcctc gccggcagcg cgcttcgggc ggctgggccc
     7741 gggcggtgag acctcgcgcg aagtcagcta tcggctgaac gatcaggggc tgggggaagt
     7801 ccggcgcccc gtgatcgtcg tccccagggt ggacgtgaag ctcgatccct cgacctacgt
     7861 ctggtcgctg ctcacgccga gcacccaccg gttcaccgtg accctgaccc acggcgcgcc
     7921 cgacacgacc accggcacgg taggcctcga ggtgcccgag ggatggccgg cggtgcggcc
     7981 ccaggcgttc cggctcacgg gcgaggacga gcgggaggcc tttaccttcg acgtgcgcac
     8041 cccgcgaggg atggagcggg ggagcgcgac gatccgggcg gtcgcgaggg attcgggcgg
     8101 ccgggagtac agcggaggcg tcgtcaccgt gacgtacccg cacatccgct cccggtcgta
     8161 cctggtgccg gccacctcgg aggtgcgact cgcgccggtg gccctcccga cgctcgcccg
     8221 ggtcggctac gtgcggggag catcggacgt ggtaccggag gcgctgcagc aggccgggct
     8281 gccggtgacg ctgctcgacg ccggggcgct ggagcgcgcc gacctcaccc tctaccccgt
     8341 catcgtcatc ggaccccggg cctatgagac cgactcggcg ctggtggaga acaacgcccg
     8401 gctgctgtcg tacgtgcgcg gcggcggggt gctgatcgtg cagtaccagc agcatcggtt
     8461 cttcaccggc ggcttcgctc cgctgccgat gacggtgggg gggccgccgc tccccaccgc
     8521 gggcgacacg ctccacgcga gcgcgggcac cgacggcgac cccgcgacgg actcgaccgc
     8581 gacggactcg agcgcgacgg actcgagcgc gacggactcg accgctcgcc ccctgagcca
     8641 cgaccgggtg gtggacgaga ccgccccggt cacgattctc gagtccgacc acccggtgct
     8701 caggcggccc aaccggatct cggagcgcga ctgggagggc tggatccagg agcgcggact
     8761 ctacttcgcg cgtacctggg acccggcgta ccagccgatc ctggagaccc acgacgaggg
     8821 cgaggcggag ctgcggggcg gactcctcat cgcgccggtg gggcggggca cctacgtcta
     8881 caccggcctg tccttcttcc ggcagctccc ggccggcgtg cccggcgcgt tgcggctgtt
     8941 cgtgaatctc ctggccctgg gacggccccc gacccgctga ccggaggatg caccacgacg
     9001 acatgagcgc acactcgctt cgtgccctcc
//
LOCUS       DASUYN010000585         2102 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1728140, whole genome shotgun sequence.
ACCESSION   DASUYN010000585 DASUYN010000000
VERSION     DASUYN010000585.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2102)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2102)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2102
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1728140"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1461
                     /gene="hutH"
                     /locus_tag="VF061_11475"
     CDS             <1..1461
                     /gene="hutH"
                     /locus_tag="VF061_11475"
                     /EC_number="4.3.1.3"
                     /inference="COORDINATES: protein motif:HMM:NF006871.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004397 - histidine ammonia-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006548 - histidine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine ammonia-lyase"
                     /protein_id="HEX6670175.1"
                     /translation="RQPAVAARLNPSARGALVASRRLVEQAIASGQTIYGINTGFGKL
                     ANVRIAPDRLDALQVNLIRSHAAGVGPPLPPGVVRAVMLLRANVLLRPTSGVRPELVE
                     ALLAMLNAGIIPAVPEQGSVGASGDLAPLSHIALALMGEGEVLGDGGPEPAASALARA
                     GLRPFRLAPKEGLAFINGTQAQTALLALLVHAAEVLWRTAVGAAAMSLEALRGTPAPL
                     DPRIHEARPHRGQLETAALMRELLADSEIRESHRENDPRVQDAYSLRCAPQVLGAVAD
                     AIRFARETVTVELNASTDNPLVFPDGDVISGGNFHGQPVAQALDFLATALTTLQAIAE
                     RRVERLVNPDLSQGLPAFLTADPGLSSGFMMVQISAASLVAESRTLAMPASIGSIPTD
                     ANQEDFVPMGMAAAWKAQRILANAQRVVGAELLCAAQGLEFLRPLRPGRGVERLHRRL
                     RELTPPVRPLEADRPPAPDLERLALAIAVGDLDPGN"
     gene            1560..>2102
                     /locus_tag="VF061_11480"
     CDS             1560..>2102
                     /locus_tag="VF061_11480"
                     /inference="COORDINATES: protein motif:HMM:NF024579.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670176.1"
                     /translation="MNLEKLKDTARKFEQKEDWRRAIEVYLKAIQQIESGQETSPDLS
                     LYNRVGDLYLKTNDTAAAVRSYERAVDLYADQGFFNNAIALCGKILRVNPGRTQTYLK
                     LAQLHARKNVVIEAKRNLIEFLERMNALGQLDQAFTSVKEFADQFSGSQEIRLMLVEL
                     LRATSREDEAREQLEKLAGEI"
BASE COUNT          309 a          765 c          732 g          296 t
ORIGIN      
        1 cgccagccgg cggtggcggc ccggctcaat ccctcggctc ggggggcgct ggtcgcgagc
       61 cgccggctgg tggagcaggc gatcgcgtcg gggcagacga tctacggcat caacaccggc
      121 ttcggcaagc tcgccaacgt ccgcatcgcg cccgaccgcc tcgacgcgct ccaggtcaac
      181 ctgatccgca gccatgccgc cggcgtgggc ccgccgctgc cgccgggcgt ggttcgcgcc
      241 gtgatgctgc tccgggccaa cgtgctcctg cggcccacca gcggcgtgcg ccccgagctg
      301 gtggaggcgt tgctggcgat gctgaacgcc gggatcattc cggccgtccc ggagcagggc
      361 agcgtcggcg cgagcggcga cctcgcgccg ctgagccaca tcgcgctcgc gctcatgggc
      421 gagggcgagg tgctcggtga cggcggtccg gagccggcgg cgtcggccct cgcgcgggcc
      481 ggcctccgtc ccttccgcct cgcaccgaag gaggggctcg ccttcatcaa cggcacccag
      541 gcccagacgg cgctgctggc cctgctggtg cacgccgccg aagtgctgtg gcggacggcg
      601 gtgggcgcgg cggcgatgag cctggaggcg ctgcggggga cgcccgcgcc gctcgacccg
      661 aggatccacg aggcgcggcc gcatcgggga cagctcgaaa cggcggcgct catgcgcgag
      721 ctgctggccg acagcgagat ccgggaatcc caccgggaga acgatccccg ggtccaggat
      781 gcctactccc tccgctgcgc cccgcaggtg ctgggggcgg tggccgacgc gatccgcttc
      841 gcccgggaga cggtgacggt ggagttgaac gcctcgaccg acaatccgct ggtcttcccc
      901 gacggcgacg tcatctccgg cgggaacttt cacggccagc cggtggcgca ggcgctcgac
      961 tttctcgcga ccgcgctcac cacgctccag gcgatcgccg agcggcgcgt ggaacggctg
     1021 gtgaaccccg atctgtcgca gggacttccc gcctttctca ccgcggatcc ggggctcagc
     1081 tccgggttca tgatggtgca gatctccgcc gcctcgctgg tcgccgagtc gcgcaccctg
     1141 gccatgccgg ccagcatcgg gtccattccc acggacgcca accaggagga cttcgtgccg
     1201 atgggcatgg cggcggcctg gaaggcgcag cggatcctgg ccaacgccca gcgggtggtg
     1261 ggggccgagc tcctgtgcgc ggcccagggg ctcgagttcc ttcggcccct cagaccgggg
     1321 cggggcgtcg agaggctcca ccgccggctg cgggagctca ccccgccggt ccggcccctg
     1381 gaggccgacc gtcctccggc gcccgacctg gagcggctgg cgctggcgat cgccgtcggg
     1441 gatctcgatc ccgggaactg acccgccccg gcgattcttg ccccgctcgc accagtcccg
     1501 gtatctttcg accgccaaac cccttatgct ctgagtcccc ccttcgccgc ccgagtcgca
     1561 tgaacctcga aaagctcaag gacacggcgc gcaaattcga gcagaaggag gactggcgga
     1621 gggccatcga ggtctacctc aaggccatcc agcagatcga gtcgggccag gagacctcgc
     1681 ccgatctctc cctctacaac cgcgtcggcg acctctacct caagaccaac gacacggcgg
     1741 cggcggtccg ctcctacgag cgggcggtgg atctctacgc cgaccagggc ttcttcaaca
     1801 acgccatcgc gctgtgcggc aagatcctgc gggtgaatcc cggccgcacc cagacgtacc
     1861 tcaagctggc ccagctgcac gcgcgcaaga acgtcgtcat cgaagccaag cggaacctga
     1921 tcgagttcct ggagcggatg aacgccctgg gccagctgga ccaggccttc acctcggtga
     1981 aggagttcgc cgaccagttc tccggcagcc aggagatccg gctgatgctg gtcgagctgc
     2041 tgcgcgccac ctcccgcgag gatgaggccc gggagcagct ggaaaagctc gcgggggaga
     2101 tc
//
LOCUS       DASUYN010000586         3087 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_626128, whole genome shotgun sequence.
ACCESSION   DASUYN010000586 DASUYN010000000
VERSION     DASUYN010000586.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3087
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_626128"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..332)
                     /locus_tag="VF061_11485"
     CDS             complement(<1..332)
                     /locus_tag="VF061_11485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670177.1"
                     /translation="MQSPPATWLDHLADEADAAFLYRELVHAEPDPARAELYRKLAEV
                     EDRHVAMWRELLAQEGHLLPVPGPSRGARFRAWLARRVGASVLLPMLLAEEGREVKGY
                     LQLHDATP"
     gene            435..971
                     /locus_tag="VF061_11490"
     CDS             435..971
                     /locus_tag="VF061_11490"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX6670178.1"
                     /translation="MESCLLADADSVVARARQGDETALEALYRAFEVPVYNLARRICR
                     TTEDAEDVLQETFFEVCRSIRSYREEGSLWGWIRTIAASKALMRLRRNKYRDADELHE
                     EVIGRRKDDTHLRMDLEAALERLPEVSRAVVWLHDVEGYTHDEIAGMMGKTPSFSKSQ
                     LARAHARLRRWLGEEVIA"
     gene            968..1570
                     /locus_tag="VF061_11495"
     CDS             968..1570
                     /locus_tag="VF061_11495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670179.1"
                     /translation="MSHLSIETLVALRDAGTEPGEAAAREHLDVCPACRAELERLHQR
                     VARLKALPPLRPARERWPAVVGRVRAERRQRQVRTGGLAGLAAAASVALALGVSSLRP
                     VEARLDPAEIQQAMVRSQALESALDRIDPESRVLDGRTAGITQQLEDRIARLDRELEM
                     AELMEQQARDAELLRLWRERVGLLDALVDVHVTRASNVGL"
     gene            1587..2465
                     /locus_tag="VF061_11500"
     CDS             1587..2465
                     /locus_tag="VF061_11500"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HEX6670180.1"
                     /translation="MRQQAILGAVLALGGLGAPVPAASAQEPEVVHLERAPDRLMRIM
                     LDRRARLGIKVNLRPRETDSIGAFVDAVTPGGPADEAGIRSGDIITRLDGKSVLSGGA
                     AEGGDRQRQSLPGLRLIELAARLEPGDTVPVEYRRGKERRTASVVTADEPDLVTRDGD
                     RFSFSFRGPDPVAGRRVIPSPELMRRLEVDGPHWQFFSGSPLGRLELAPLNPDLGRYF
                     GTVEGVLVISVPDDSTLGLKGGDVVLRVDGREPSSPSHLLRILRSYEAGETFKLDIMR
                     DRKKEAVTARIGERDS"
     gene            2547..2816
                     /locus_tag="VF061_11505"
     CDS             2547..2816
                     /locus_tag="VF061_11505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HEX6670181.1"
                     /translation="MGILWTLIIGLVVGAIAKLLMPGKDPGGFFITMLIGVAGALLAG
                     FLGRALGWYANPGEGPGIIASIIGAMLLLLIYRMFVGRRGRTTVP"
BASE COUNT          435 a         1051 c         1132 g          469 t
ORIGIN      
        1 tcgggtgtgg cgtcgtgaag ctggaggtag cctttcacct cccggccttc ctcggccagg
       61 agcatgggga gaaggaccga cgcgcccacc cggcgggcca gccaggcgcg gaatctggcc
      121 ccccggctcg ggcccgggac cggcaggagg tgcccctcct gcgccagcag ctcccgccac
      181 atcgccacgt ggcgatcctc gacctccgcc agcttgcggt acagctcggc gcgggcgggg
      241 tccggctcgg cgtgcaccag ctcccggtag aggaacgcgg cgtcggcctc gtcggccagg
      301 tggtcgagcc aggtggcggg cggtgactgc atgtcgggga aggtagcctg ggtgacaggg
      361 ggccgccgtc ccctggcctg caacgatctc cagtccccac gcatctttag gcaaccatgt
      421 cccggaccct ttccatggaa tcctgtctcc ttgccgacgc tgactccgta gtcgcccggg
      481 cgcggcaggg agacgagacg gccctcgagg ccctctatcg ggccttcgag gtccccgtct
      541 acaacctcgc ccgccggatc tgccgcacca ccgaggacgc ggaagacgtg ctccaggaga
      601 cctttttcga ggtctgccgg agcatccgga gctaccggga ggaggggagc ctctggggct
      661 ggatccgcac catcgcggcg agcaaggcgc tcatgcggct tcgccggaac aagtaccgcg
      721 acgccgacga gctgcacgag gaggtcatcg ggcggaggaa ggacgacact cacctccgca
      781 tggacctcga ggccgcgctg gaacgcctgc ccgaggtctc gcgcgccgtg gtctggctcc
      841 acgacgtcga gggctacacc cacgacgaga tcgcggggat gatggggaag acgccgagct
      901 tttcgaagtc gcagctcgcc cgggcacacg cgcgactgcg gcgctggctc ggcgaggagg
      961 tgatcgcatg agccacctgt cgatcgagac ccttgtcgcc ctgagagatg caggcaccga
     1021 gccgggcgaa gccgcggcgc gggagcacct ggacgtctgc ccggcctgcc gggcggagct
     1081 cgagcggctg caccagcggg tggcacggct caaggcgctc cccccgctcc ggcccgcccg
     1141 ggagcgctgg ccggccgtcg tgggccgggt tcgggccgag cggcgacagc ggcaggtccg
     1201 gaccggcggt ctcgccgggc tcgcggccgc ggcctcggtg gcgctggcgc tgggggtgag
     1261 cagcctccgg ccggtggagg cccggctgga cccggcggag atacagcagg ccatggtgcg
     1321 ctcccaggcg ctggagtcgg cgctggatcg gatcgacccg gagagccggg tgctggacgg
     1381 ccgcaccgcc ggcatcaccc agcagctgga agaccggatc gcccggctgg accgggagct
     1441 ggagatggcc gagctgatgg agcagcaggc gcgggacgcc gagctcctcc ggctctggcg
     1501 cgagcgggtc gggctgctcg atgccttggt ggacgtgcac gtgacccgcg ccagcaacgt
     1561 ggggctctag ccccggaggt ggtcccatga gacagcaagc gatcctcggc gcggtcctcg
     1621 ccttgggcgg tctgggtgcc ccggtcccgg ccgcgtcggc ccaggagccc gaggtggtcc
     1681 acctcgagcg cgcccccgat cggctgatgc ggatcatgct ggaccgccgc gcccggctcg
     1741 gcatcaaggt gaacctccgt cccagggaaa ccgactcgat cggcgccttc gtggatgcgg
     1801 tgacgcccgg tggccccgcc gacgaggccg gcatccgatc cggggacatc atcacccggt
     1861 tggacgggaa gtcggtcctc tcgggcgggg ccgcggaggg gggtgaccgg cagcggcagt
     1921 cgctcccggg acttcggctc atcgagctgg ctgcccggct ggagcccggt gacacggtgc
     1981 cggtggagta ccgccggggg aaggagcggc gtaccgcctc ggtcgtgacc gcggatgagc
     2041 cggacctggt cacccgcgac ggcgatcgct tcagcttcag cttccgtggc cccgaccccg
     2101 tcgcgggccg gcgggtgatc ccgtcccccg agctcatgcg gcggctggag gtggacgggc
     2161 cgcactggca gttcttcagc ggctcacccc tgggccggct cgagctggca ccgctcaacc
     2221 ccgatctggg ccgctacttc ggtaccgtcg aaggggtcct ggtgatcagc gttcccgacg
     2281 attccaccct ggggctcaag ggcggggacg tggtgctccg ggtggacggc cgggagccct
     2341 ccagcccctc gcacctgctc cggatcttgc ggagttacga agcgggcgaa accttcaagc
     2401 tggacatcat gcgggatcgg aagaaggagg cggtgacggc ccggatcggc gagcgcgact
     2461 cctgatcctc ccgacctcct gtgcgcccgc tcacagatgt ccgatgcgga cctctggtat
     2521 atcttcggcc caccttggag ggaactatgg gaatcctgtg gaccttgatc atcgggttgg
     2581 tcgtaggggc gatcgccaag ctgttgatgc cgggtaagga cccgggcggg ttcttcatca
     2641 ccatgctgat cggtgtggcg ggcgcactgc tggccgggtt tctcggccgg gcccttggct
     2701 ggtatgccaa tcccggcgag ggtcctggga tcatcgcctc gatcatcggc gcgatgctcc
     2761 tgctgttgat ttaccggatg ttcgtggggc ggaggggcag gacgacggtt ccgtagccgg
     2821 gtacggttcg agatctcgat ccgagggtgc ggctgtcacc ctgagcgtag cgaagggggc
     2881 catgtgcgag atggccccct tcgctgcgtt cagggtgaca gcgtttctca caccgcgagc
     2941 ctgctcctgg cctccctccc tgggtgcacc cgagccgcca ggtcggcgaa catcggcagg
     3001 tccaggctct gggccccgtc actcatcgcg ctcccgggat cgggatgtac ctccaccagc
     3061 agcccgcagg cgcccgccgc cagcgag
//
LOCUS       DASUYN010000587         2502 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_407802, whole genome shotgun sequence.
ACCESSION   DASUYN010000587 DASUYN010000000
VERSION     DASUYN010000587.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2502
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_407802"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..452
                     /locus_tag="VF061_11510"
     CDS             <1..452
                     /locus_tag="VF061_11510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670182.1"
                     /translation="EWKTMERRYLAQLDTLRNEMGLVGADLSDTTVAAAERQKVAGLK
                     MEQYFDDLIAGKATLRPLPSALATLLRERLPHRVEQAGVTRAVEIAKEQKAKADSAEG
                     GGGPVRRAPGGPPIPGPGGAPQVPGQGGAAPQPQGGTSPAPDPARPQ"
     gene            485..1894
                     /locus_tag="VF061_11515"
     CDS             485..1894
                     /locus_tag="VF061_11515"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF024545.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEX6670183.1"
                     /translation="MRVQMRVNRWAAGLASLLLWVGGPAGRAAAQDTTSATAPADTVV
                     AAPPSRAVVPPDSVVVVDRVLAVVGNRPVLASQVDEELFSRQAQGVELPDDPKQLDAL
                     RREVVSSIVDEELLVQQAIRDTSIQVTDQEIADGVEQQIRKVRENFTSEVDYKNELKK
                     AGFQTPEEYRRWLTDQQRRAALQNRLIDGLKGAGQLKSVSPTEQEMRQYFEAQKGNLG
                     SRPATISFRQIVITPKASAAARSRTRAQADSIVLELRQGADFATAARRFSQDPGSRDQ
                     GGSLNWFRRGVMVPEFERVAFALKPGVVSDPVESPFGFHIIQVERTQPAEVQARHILL
                     IPELDSAHVDSARALAGRLHQLVARGASFDSLQRIHHDPAGGEREAENVPADKLPETY
                     AGAVANADSGAVVPVFTIKGPGDSDQYVVLQVTNRRQQGDIRFEDVKDRIRQQLGQEL
                     AIRRYIDQLRKSTYVELRI"
     gene            1891..>2502
                     /locus_tag="VF061_11520"
     CDS             1891..>2502
                     /locus_tag="VF061_11520"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: protein motif:HMM:NF016084.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HEX6670184.1"
                     /translation="MSAGWAERRGGGAAGSLPRVAITLGDPRGIGPEIAARALASSLG
                     AEVTLVGAEDQIAGVPAERRVPVGVWGQGTGELPEDRPRAIRAGRLTGHAVETAVRLA
                     LAGEVDAIVTAPAQKHALHLAGFPYPGHTEWLAHLAGDVDVAMMLAAAELRVVLVTTH
                     VPFRDVPALLTQDRVIRTGRITERALRDWWGLERPRLVLCALNP"
BASE COUNT          371 a          847 c          957 g          327 t
ORIGIN      
        1 tggagtggaa gacgatggag cgccgctacc tcgcgcagct ggacacgctc cgtaacgaga
       61 tgggtctggt cggggccgac ctgagcgaca ccaccgtggc cgccgcggag cggcagaagg
      121 ttgcgggcct caagatggag cagtacttcg acgacctgat cgcggggaag gcgacgctgc
      181 ggccgctccc ctccgcactg gcgaccttgc tgcgggagcg gctcccgcac cgggtggagc
      241 aggcgggcgt gacccgcgcg gtggagatcg cgaaggagca gaaggccaag gccgattcgg
      301 cggagggcgg cggcggtccc gtgcgtcgcg cgcccggcgg gcccccgatc ccgggcccgg
      361 gcggggcgcc gcaggtgccg ggtcagggtg gtgcggcgcc ccagccgcag ggcggcacgt
      421 ccccggcccc ggacccggcc cggccacagt agccgcgacc gccagaactg cggagggtgc
      481 agcgatgagg gtgcagatgc gggtgaaccg atgggcggcc gggctggcga gcctcctgct
      541 gtgggtcggg ggcccggccg ggagggccgc ggcccaggac accacctccg cgacggcccc
      601 cgcggatacc gtcgtcgctg cgccgccctc gcgcgcggtg gtgccgccgg attcggtggt
      661 ggtcgtggat cgggtgctcg ccgtggtggg caaccgcccg gtgctggcct cccaggtaga
      721 cgaggagttg ttcagccgtc aggcccaggg cgtggagttg cccgatgatc ccaagcagct
      781 cgacgcgctc cgccgggagg tggtgtcgtc catcgtggac gaggagctcc tggtgcagca
      841 ggcgatccgc gacaccagca tccaggtcac cgaccaggag atcgccgacg gcgtcgagca
      901 gcagatccgg aaggtgcgcg agaacttcac ttccgaagtg gactacaaga acgagctcaa
      961 gaaggccggc ttccagacgc cggaggagta ccggcgctgg ctcaccgacc agcagcggcg
     1021 cgcggcgctc cagaaccggc tgatcgacgg gctcaagggc gcgggccagc tcaagtcggt
     1081 gtcaccgacc gagcaggaga tgcgccagta cttcgaggcc cagaagggca acctcggcag
     1141 ccgtccggcg acgatctcct tccggcagat cgtgatcacg ccgaaggcga gcgcggcggc
     1201 caggtccagg accagggcgc aggccgactc gatcgtgctg gagctgcggc agggcgcgga
     1261 tttcgcgacc gcggcgcgcc ggttctccca ggatcccggg tcacgcgacc agggcggatc
     1321 gctgaactgg ttccgccggg gcgtgatggt gcccgagttc gagcgggtgg cattcgcgct
     1381 caagccgggt gtggtgtccg atccggtcga atcccccttc ggcttccaca tcatccaggt
     1441 ggagcggacc cagccggccg aggtgcaggc ccgccacatc ctgctcattc ccgagctcga
     1501 ttccgcccac gtggacagcg cgcgcgcgct cgcaggccgg ctccatcaac tggtcgcgcg
     1561 aggcgcgtcg ttcgattcgc tccagcggat ccatcacgac ccggccggcg gcgagcgtga
     1621 ggcggagaac gtcccggcgg acaagctgcc cgagacctac gccggtgccg tggcgaacgc
     1681 cgactcgggc gcggtcgtgc cggtgttcac catcaagggc cccggcgaca gcgaccagta
     1741 cgtcgtgctc caggtgacca accgccgcca gcagggcgac atcaggttcg aggacgtgaa
     1801 ggaccggatc cgccagcagc tcggccagga gctcgccatt cgccgctaca tcgatcagct
     1861 gcggaaatcc acgtacgtgg agctccggat ttgagcgcgg ggtgggcgga acggcggggc
     1921 ggcggggcag cggggtcgct gccccgcgtc gctatcaccc tgggcgatcc gcgggggatc
     1981 gggcccgaga tcgccgcccg cgcgctggcg tcgtcgctcg gcgccgaggt gacgctggtc
     2041 ggcgcggaag accagatcgc cggggtgccg gccgaacgac gcgtaccggt cggcgtatgg
     2101 gggcagggca ctggcgagct gccggaggat cggccgcgcg cgatcagagc ggggcggctc
     2161 acgggtcacg cggtggagac cgccgtgcgg ttggcgctgg cgggggaggt ggacgcgatc
     2221 gtcaccgcgc ctgcccagaa gcacgccctg cacctggccg ggtttcccta ccccgggcac
     2281 accgagtggc tcgcccatct cgccggtgac gtggacgtgg cgatgatgct ggcggcggcg
     2341 gagctgcgcg tggtcctggt cacgacccat gtgccctttc gcgacgtccc cgcgctcctc
     2401 acccaggacc gggtgatccg gaccggacgc atcaccgagc gggcgctgcg cgactggtgg
     2461 ggtctcgagc ggccacggct ggtgctgtgc gccctcaacc cg
//
LOCUS       DASUYN010000588         2807 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_184918, whole genome shotgun sequence.
ACCESSION   DASUYN010000588 DASUYN010000000
VERSION     DASUYN010000588.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2807)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2807)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2807
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_184918"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..894
                     /locus_tag="VF061_11525"
     CDS             <1..894
                     /locus_tag="VF061_11525"
                     /inference="COORDINATES: protein motif:HMM:NF037084.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670185.1"
                     /translation="EAGGARSTKSRGDLDIGVSVLPKLPRDAGDRNRTSPFAFTGNKF
                     EFRAVGSSASIAWPNTVLNTIVAESLDYMATELEKAVGARSNAAKLQSAVMAVLKKVI
                     KQHKRVFFDGDNYSEEWHAEAERRGLPNLRDSVEAFRVLKARKNVDLFRKYGVLSKAE
                     YDSRVHIAIEKYVKQLAIEAETMVSMARGQILPAALEHQRRMAEAVASTKAAGFQPGE
                     TATALREFIQLVDQFRERTAEVERLAAHQEGDSARHAEQISKQLKPAMQRLREAGDAI
                     ESQVAADVWPLPTYRNLLFLK"
     gene            complement(1009..1467)
                     /locus_tag="VF061_11530"
     CDS             complement(1009..1467)
                     /locus_tag="VF061_11530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670186.1"
                     /translation="MQSPLVVCALREQLLRVLDWYQHQRPAYGWGAVIHRRNERGRLR
                     FGAITPGGESLLLTEPLARELGSLPCWLDGAVRVRLECRRLTEPQAWMDALVRSNRPR
                     LVEALAVYFDPDTTPEETVAFQAMAGVLTPTRCPSELFVLTRARPEGWPM"
     gene            1669..>2807
                     /locus_tag="VF061_11535"
     CDS             1669..>2807
                     /locus_tag="VF061_11535"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX6670187.1"
                     /translation="MPDPATAGSHVFYRKLTRRYPRIVRGEGCYLHDDAGRRYLDACG
                     GAFTVNVGHGVPEIAAAIGEQARTLGYVNGTAFTHGPVEELAAELARLSPGDLELVYP
                     LGSGSEAVEAALKLARQYWVEIGRSDKDTVIALAPSYHGNTLLALSASARPHYSALFG
                     EWLVEMVRAPASYPYRCECRGTPPYCPACSGDAIEQAIVRTGPDRVAAIIAEPVGGSS
                     TGASVPQPGYWPRVRQICDRYGVLLIADEVLTGAGRTGTWSALEPYGVVPDIMTLGKG
                     IAGGYVPLSAVVTSRRIREPLAGGSGALAHAQTFSHHPVLCAAGVATLRYLRERRLVE
                     RCAEMGRVLHRRLAGLRDLPLLGDVRGRGLLAGLEFVADPVTREPL"
BASE COUNT          439 a          960 c         1005 g          403 t
ORIGIN      
        1 gaagccggcg gggcgcgatc gaccaagtca cgcggcgatc tcgatatcgg cgtgtcggtg
       61 ttacccaagc tgccgcgtga tgccggcgac cgcaatcgca cttcgccgtt cgcattcacc
      121 ggcaacaagt tcgagttccg cgcggtcggc tccagcgcca gcatcgcctg gcccaacacg
      181 gtgctcaaca ccatcgtcgc ggagtcgctc gactacatgg ccaccgagct ggagaaggcg
      241 gtgggcgcgc ggtccaacgc ggccaagctc cagtccgcgg tgatggccgt gctgaagaag
      301 gtgatcaagc agcacaagcg ggtcttcttc gacggcgaca actactcgga ggagtggcac
      361 gccgaggcgg agcgccgggg cctgcccaac ctgcgagact cggtggaggc cttccgcgtg
      421 ctcaaggccc ggaagaacgt ggacctgttc cggaagtacg gggtgctgag caaggcggaa
      481 tacgactcgc gggtccacat cgcgatcgag aagtacgtca agcagctggc gatcgaggcg
      541 gagaccatgg tctcgatggc ccgcgggcag atcctcccgg ccgcgctcga gcaccagcgt
      601 cggatggccg aagccgtggc gtccaccaag gcggccggat tccagccggg cgagaccgcc
      661 accgcccttc gggaattcat ccagctggtg gaccagttcc gcgagcgcac ggccgaggtg
      721 gagcgactcg ccgcccacca ggagggcgac tccgcccggc acgccgagca gatcagcaag
      781 cagctcaagc cggcgatgca gcggctgcgg gaggccgggg acgcgatcga gagccaggtg
      841 gccgccgatg tgtggccgct gccgacctat cggaacctgt tgttcctgaa gtgacatcga
      901 gtgttgtcat cctgagcaca gcgaaggggg ccatatcgag catggccccc ttcacttcgt
      961 tcagggtgac agaacatccg cgtcctgcag gttgcggtac cctcaccctt acatgggcca
     1021 gccctccggc cgcgcccgcg tcaggacgaa cagctccgac ggacagcggg tcggcgtcaa
     1081 tacgcctgcc atggcctgga atgccacggt ctcctcgggt gtggtgtcgg gatcgaagta
     1141 gacggccagg gcttccacca ggcgggggcg gttgctgcgg accagggcgt ccatccacgc
     1201 ctgcggctcg gtgagccggc ggcactcgag gcgcacccgg accgcgccgt ccagccagca
     1261 gggaagggag ccgagctcgc gcgccagcgg ctccgtcagc agaaggctct cgccccccgg
     1321 ggtaatggcc ccgaaccgca atctgccacg ctcgttccgg cggtggatca ccgcacccca
     1381 gccataggcc ggccgctggt gctggtacca gtccagtacg cgcaagagct gttctcgcaa
     1441 ggcgcagacg accagtggtg attgcatggt gtaccgccgt caggggttcc cgttctcacc
     1501 tgtaggggca gggtcgcgat gtcagataag caggatacgg gccaagcgtt cgggccactc
     1561 cggcgcggga tcgaccggag cgaccctggc gccgcacctc cgatccgggc acattccgcg
     1621 ctcggaggca cgagggccct ccgctccccc aggcaggccg ccaagcagat gccagatccc
     1681 gccaccgccg gctcgcacgt cttctaccgg aagctgacgc gacggtaccc gaggatcgtg
     1741 cgcggggaag gctgctacct ccacgacgac gccggccgcc gatacctcga cgcgtgcggc
     1801 ggcgcgttca cagtcaacgt cgggcacggc gtcccggaga tcgcggcggc catcggggag
     1861 caggcccgca cgctggggta cgtgaacggc accgccttca cccacgggcc ggtcgaggag
     1921 ctcgccgccg agctcgcgcg actgtcgccg ggagacctgg agctggtgta ccccctgggc
     1981 agcggctccg aggcggtgga agcggcgctc aagctggcgc ggcagtactg ggtcgagatc
     2041 gggcggagcg acaaggacac ggtcatcgca ctggcgccgt cctaccacgg gaacaccctg
     2101 ctcgccctgt ccgcctccgc ccggccgcac tacagcgcgc tgttcgggga gtggctggtg
     2161 gagatggtgc gggccccggc gtcctatccc tatcgctgcg agtgccgggg cactccgccc
     2221 tactgtcccg cctgcagcgg cgatgccatc gagcaggcca tcgtccgcac cgggccggac
     2281 agggtcgccg cgatcatcgc ggagccggtc ggcggctcgt ccacgggcgc ctcggtgccc
     2341 cagccgggct actggccccg ggtgcggcag atctgtgacc ggtacggcgt gctgctcatc
     2401 gcggacgaag tgctcaccgg cgccgggcgt accggcacct ggtcggcgct ggagccgtat
     2461 ggcgtggtgc ccgacatcat gacgctgggg aaggggatcg cgggcggcta cgtgccgctc
     2521 tcggcggtgg tcaccagccg ccggatccgg gagccgctgg cgggcgggtc gggtgccctc
     2581 gcccatgcgc agacgttctc tcaccatccc gtgctctgcg ccgcgggcgt ggccacgctg
     2641 cgctacctgc gggaacgccg tctggtcgag cgctgtgcgg agatgggtcg agtgctgcac
     2701 cggcgcctgg cggggttgcg tgacctcccg ctgctgggag acgtgcgggg acggggactg
     2761 ctcgccgggc tggagttcgt ggcggacccc gtgacgcggg agccgct
//
LOCUS       DASUYN010000589         3885 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_185488, whole genome shotgun sequence.
ACCESSION   DASUYN010000589 DASUYN010000000
VERSION     DASUYN010000589.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3885)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3885)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3885
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185488"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..340
                     /locus_tag="VF061_11540"
     CDS             <1..340
                     /locus_tag="VF061_11540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670188.1"
                     /translation="ALTGWILIAAARTVLGFGAVLGARAGRVGDVSPATAREWRQYAT
                     DVERGTRTPSAATTRLLTETAIAQNAHASTAVDLLLFLGVGVALLGVILVADLIRFRG
                     RHTGAGSAAG"
     gene            340..864
                     /locus_tag="VF061_11545"
     CDS             340..864
                     /locus_tag="VF061_11545"
                     /inference="COORDINATES: protein motif:HMM:NF016246.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 domain-containing protein"
                     /protein_id="HEX6670189.1"
                     /translation="MPRRADVATVGYQGATISTLLQALHGAGVELLVDVRAVASSRRP
                     GFAKSALAANLRGAGIDYLHLRDLGTPAPGRAAARAGRHGEMRRIYLAHLDTPAAREG
                     LTALADIVRSGSRVCLLCFEAEAAHCHRSLVADALSDLVPIRVTHLAPAAPDPHPSRR
                     ESRGGRPMSPDLRP"
     gene            861..1244
                     /locus_tag="VF061_11550"
     CDS             861..1244
                     /locus_tag="VF061_11550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670190.1"
                     /translation="MSDDRLERWTYLSTGLPIGLALGAAIWILSASVTGRQEPWDASG
                     ISYPTALMLAGLVGGFLVPAHWLEVAVGVYAGQALVLLGRVMSDPGNGGLWPLGLVVL
                     AVYSLVALAGALAGSALRRLANRRG"
     gene            1297..1812
                     /gene="mug"
                     /locus_tag="VF061_11555"
     CDS             1297..1812
                     /gene="mug"
                     /locus_tag="VF061_11555"
                     /EC_number="3.2.2.28"
                     /inference="COORDINATES: protein motif:HMM:NF007570.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000700 - mismatch base pair DNA
                     N-glycosylase activity [Evidence IEA];
                     GO_process: GO:0006285 - base-excision repair, AP site
                     formation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="G/U mismatch-specific DNA glycosylase"
                     /protein_id="HEX6670191.1"
                     /translation="MPDLVAPGLRVLFCGINPGLYSGATGHHFARPGNRFWPALHAAG
                     FSDRLLAAWEEHRLLRRGYGITNLVARATAGADELTADELAAGRRRLERLVRRHAPRW
                     VAVLGLGAYRVAFGRPLAVVGGQPVTLAGARLRVLPNPSGLNAHYQLPDLVREFAALR
                     AAVRRSATRDG"
     gene            1860..2447
                     /locus_tag="VF061_11560"
     CDS             1860..2447
                     /locus_tag="VF061_11560"
                     /inference="COORDINATES: protein motif:HMM:NF009205.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease proteolytic subunit"
                     /protein_id="HEX6670192.1"
                     /translation="MLRQHEPESPPTAVADPIGERLLRARTIIISGEITQKLASSVSG
                     QLLALAAESEADITIFINSQGGHVEAGDTIHDLVRFIRPRVRMIGTGWVASAGALIFV
                     AAPREQRFCLPNTRFLLHQPAGGAGGTASDIDIEAKEILRMRDRLNRIFARETGQPLE
                     RIEEDTHRNFWLGAEAALRYGLVGRIIERATDLES"
     gene            2456..3196
                     /locus_tag="VF061_11565"
     CDS             2456..3196
                     /locus_tag="VF061_11565"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: protein motif:HMM:NF016107.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HEX6670193.1"
                     /translation="MGMREEFEAAGNWLFRRRGYLPLLLFPLLLLAASGDTAQAGGSG
                     LGAVWEGFCVAVALGGLALRIATVGFVPKDTSQRNTGRPQAETLNTTGLYSVVRHPLY
                     VGNYLMWLGVALFTRAWWAPVIVSLVFWLYYERIMFAEEEFLRRRFGADYTGWAGTTP
                     AFLPRPRLWRPPAARFCLLTVLRREHSGLLALIASLTALKVVSEHAATGRLGLDPVWG
                     TALATTLALCAAVRTLKHRTRLLHVEGR"
     gene            3205..3678
                     /locus_tag="VF061_11570"
     CDS             3205..3678
                     /locus_tag="VF061_11570"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX6670194.1"
                     /translation="MAIASFRPAAESDVDLLLQLMAALYQEDGSTPLRREAAMTAIRR
                     LLATPELGLVRVIERGGEPAGYLVLTWGYSLEFHGRDAFIDELYVAPAHRGLGIGGEA
                     VAWAEAACREHGAAAVHLEVELENERAHALYRRSGFAERGLRLMTKRVGAAPERR"
BASE COUNT          464 a         1430 c         1370 g          621 t
ORIGIN      
        1 ggcgctgacc ggctggattc tgatcgcggc cgcgcggacc gtcctcggtt ttggcgccgt
       61 gctgggcgct cgggccggac gggtggggga cgtctctccc gcgaccgcgc gggagtggcg
      121 gcagtatgcc accgacgtgg agcgcggcac ccgcacccct tcggcagcga ctactcgact
      181 gctgaccgag acggcgatcg cccagaacgc tcacgccagc accgccgtgg acctgctgct
      241 cttcctcggg gtcggcgtgg cgctcctggg cgtgatcctc gtcgctgatc tgatccggtt
      301 ccgcggcagg cacaccgggg ccggctcggc cgccggctga tgccgcggcg ggccgacgtg
      361 gcgacggtcg gctaccaggg cgccacgata tctaccctcc tccaggctct ccacggcgcc
      421 ggcgtcgagc tgctggtgga cgtgcgggcc gtcgcgagtt cccgccgtcc cggcttcgcc
      481 aagtccgcgc tcgccgccaa cctccggggc gcgggtatcg actacctgca cctgcgcgac
      541 ctggggacgc ccgcgcccgg ccgggcggcg gcgcgtgcgg gccggcacgg cgagatgcgg
      601 cggatctacc tggcccacct ggacactccg gcggcccggg agggcctcac ggccctggcc
      661 gacatcgtcc gttcgggctc tcgcgtgtgc ctcctctgct tcgaggcgga ggccgcccac
      721 tgtcaccgct ccctcgtggc cgacgcactc tccgatctcg tccccatccg cgtcacccac
      781 cttgctccgg cggccccgga tcctcatcct tcgcgccgag agtctcgcgg aggacgaccg
      841 atgtccccgg acctgcgacc gtgagcgacg atcggctgga gcgctggacc tatctgtcca
      901 ccggtcttcc gatcgggctc gcgcttggcg ccgcgatctg gatcctgtcc gcctccgtca
      961 ccgggcggca ggagccgtgg gacgcctccg gtatctccta cccgaccgcg ctcatgctgg
     1021 cggggctggt gggaggcttc ctggtcccgg cgcactggct cgaggtcgcc gtcggggtct
     1081 acgccggtca ggcgctggtc ctgctcggcc gggtgatgag cgatcccggc aacggcgggc
     1141 tctggcccct cggcctcgtc gtcctggcgg tctattcgtt ggtggccctc gccggcgccc
     1201 tcgccggctc ggccctgcgc cgactcgcca atcgccgggg ctgatcctcc ggcccggccg
     1261 acccgggccg acctcctcgc cgccgccggc cgcacggtgc ccgacctggt cgcgccgggc
     1321 ctccgggtgc tcttctgcgg gatcaatccg ggactgtact ccggcgccac gggccatcac
     1381 ttcgcgcggc cggggaatcg cttctggccc gcgctccatg ccgccggctt cagcgaccgg
     1441 ctgctcgccg cctgggaaga gcatcggctg ctccggcgcg ggtatggcat caccaacctg
     1501 gtggcgcggg cgaccgcggg cgccgacgag ctcaccgccg acgagctggc ggcgggccgg
     1561 cgccggctcg agcgcctggt tcggcgccac gccccgcggt gggtcgccgt gctcggtctg
     1621 ggcgcgtacc gcgtcgcatt cggtcgcccc ctcgccgtgg tgggtgggca gccggtgacg
     1681 ctggccggtg ccaggctcag ggtgctgccg aacccgagcg gcctcaacgc ccactaccag
     1741 ctaccggacc tggtccgcga gttcgccgcg ctccgtgccg ctgtccgccg tagcgctacg
     1801 cgggatgggt gagcggcgtt agagttcagg cgaaccgaca acctgtggag accggatcca
     1861 tgctccgcca gcacgaaccc gagagcccgc ccactgcggt cgccgacccg atcggcgagc
     1921 gcctgctgcg ggcccgcacg atcatcatca gcggcgagat cacccagaag ctcgcgtcca
     1981 gcgtctccgg ccagctgctg gcgctcgcgg ccgaatccga ggccgacatc acgatcttca
     2041 tcaactcgca gggcgggcac gtggaggccg gcgacaccat ccacgacctg gtccgcttca
     2101 tccggccgcg ggtgcgcatg atcggcaccg gctgggtggc cagcgccggc gcgctgatct
     2161 tcgtggccgc ccctcgggag cagcggttct gcctcccgaa cacccgcttc ctcctgcatc
     2221 agcccgccgg cggcgcgggc ggcaccgcca gcgacatcga catcgaggcg aaggagatcc
     2281 tgcggatgcg ggaccggctc aaccggatct tcgcccggga aacgggccag ccgctggagc
     2341 ggatcgagga agacacccac cgcaacttct ggctgggcgc cgaggccgcg ctccgctacg
     2401 ggttggtcgg aaggatcatc gagcgggcga ccgacctcga gagctagggt ccggcatggg
     2461 catgcgtgag gagttcgagg ccgccggcaa ctggctcttc cgccgccggg ggtacctgcc
     2521 gctcctgctt ttccccctgc tcctcctcgc ggcgtccggc gacaccgccc aggcgggcgg
     2581 ctcggggctc ggcgccgtgt gggagggttt ctgcgtcgcc gtcgcgctgg gggggctcgc
     2641 cctccggatc gcgaccgtcg ggttcgtgcc gaaggacacg tcccagcgga acaccggccg
     2701 gccgcaggcc gagacgctca acaccaccgg tctgtactcc gtcgtccgcc atcccctcta
     2761 tgtcggcaac tacctcatgt ggctgggtgt ggcgctcttc acccgggcgt ggtgggcgcc
     2821 cgtcatcgtc agcctcgtgt tctggctgta ctacgagcgc atcatgttcg cggaggagga
     2881 gttcctgcgg cgccggttcg gcgcggacta caccgggtgg gccgggacga cgccggcctt
     2941 cctgccccgg ccgcggctct ggcggcctcc ggccgcccgc ttctgcctgc tgacggtcct
     3001 ccggcgcgag cattcgggcc tgctcgcgct gatcgcctcg ctcaccgcgc tgaaggtggt
     3061 gagcgagcac gccgccaccg gccgactggg cctcgacccg gtctggggca cggcgctggc
     3121 gacgaccctg gccctctgcg cggctgtccg caccctgaag caccgtacca ggctcctgca
     3181 cgtggaaggc cgctgagcgg agcgatggcc atcgcgtcgt tccggcccgc ggccgagtcg
     3241 gacgtggacc ttctgctcca gctcatggcc gcgctctacc aagaggatgg ctcgacaccg
     3301 ctgcggcgcg aagccgcgat gaccgcgatc cggcggctgc tggcgacgcc ggagctgggg
     3361 ttggtccgcg tgatcgagcg gggcggggag ccggccgggt atctggtgct cacctggggc
     3421 tacagtctcg agttccacgg tcgcgacgcg ttcatcgatg agttgtatgt cgccccggcg
     3481 caccgcgggc tcgggatcgg cggggaggcg gtggcgtggg cagaggccgc ctgccgcgag
     3541 cacggcgcgg cggcggtgca tctcgaggtc gagctcgaga acgagcgggc ccacgcgctc
     3601 tatcgccgga gcggtttcgc cgagcggggg ctccggctca tgacgaagcg ggtgggcgcc
     3661 gcgccggagc ggcggtgagc gggagcaatg tcgttttcac gtctctcatt cataagccgt
     3721 tttaaaaccg agagttgaag tctttcacct aatgtattct ctgaggttcg ttcttacgtc
     3781 acacgtcccc gcaacacggc gccctcgcgc gggtgcgccc gacctgctag ccttcgactt
     3841 cctccagccg gacccgtggt gttgaaccga tacgatgatc cctcg
//
LOCUS       DASUYN010000590         2014 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_408568, whole genome shotgun sequence.
ACCESSION   DASUYN010000590 DASUYN010000000
VERSION     DASUYN010000590.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2014
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_408568"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..493
                     /locus_tag="VF061_11575"
     CDS             <1..493
                     /locus_tag="VF061_11575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670195.1"
                     /translation="ERMLAGYDAVALDRVVRRVATDSAGVPLLATELLHAVALGLDLG
                     TISGAWPEPLRTLDQSLPGDLPDAVMAAIRIAFRRLSPAAQQVLIAAAVLGDLTTPVL
                     LERALAMEPGEITRALDELEWQRWLLAEPRGYSFVARIVRQVVDRDMVTPGQRRRIVE
                     SAR"
     gene            complement(510..>2014)
                     /locus_tag="VF061_11580"
     CDS             complement(510..>2014)
                     /locus_tag="VF061_11580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670196.1"
                     /translation="NGSSPFFSPDGKRIGFIKEGTVVRIASLAGAPTVTLTDKANTTS
                     GDWGDDGYIYFEVDSGVARMRATGGEIEPVYTIEPDKKEIATEWVHVLPGATGVLFRL
                     RHVGQGPGDFEIMASPLPRGEARSLVRGVYARYSPTGHVLVVTVDGKLIAIPFDPGKL
                     ELTGAPIALLEGVGVRNGGFNIDLTLAGNGTLAYTTGGTLGSRRAVWVSREGGVSPVD
                     PGWDPQGVIEAASLSPDGKAVAVGLSREGRRDIWVKQLPEGPFSRITFGDTSSVRPAW
                     SADGREVLYVSDRSGSGVGPTYAHRADGTGVGRLLFASSALDIGQVVASRDGRWLVFR
                     TVPVGPGSTDIMGLQPGDTTLVPLVATPAAELYPALSPDGRWLAYSSNESGAPEIYVR
                     PFPETATAKWQVSTAGGREPAWASTGRELLYLNGRGEMVSAEIPPGTTFSVGKQRTLF
                     PASDFARPGPVPSFSLSPDDKRLLMVREGEATQQSELIVAENWLEGLRGK"
BASE COUNT          272 a          729 c          731 g          282 t
ORIGIN      
        1 cgagcggatg ctggccggct acgacgcggt ggcgctcgac cgggtggtgc gccgggtggc
       61 caccgactcc gccggcgtcc cgctcctcgc gaccgagctg ctccacgcgg tggcgctcgg
      121 cctggacctc ggcaccatct ccggggcgtg gcccgagccg ctccgcaccc tcgaccagag
      181 cctccccggc gacctgcccg acgcggtgat ggccgccatc cgcatcgcgt tccggcggct
      241 gagcccggcg gcgcagcagg tgctcatcgc ggcggcggtg ctgggcgatc tgacgacgcc
      301 ggtgctgctc gagcgcgcgc tcgcgatgga gccgggggag atcacccggg cgctcgacga
      361 actggagtgg cagcggtggc tgctggcgga gccgcgaggc tattcgttcg tcgcgcggat
      421 cgtgcggcag gtggtggacc gggacatggt gacgccgggg cagcggcggc ggatcgtgga
      481 gtcggcacgg tagcgccgct cctgtcaact cacttcccgc gcagcccctc cagccagttc
      541 tccgccacga tcagctcgct ctgctgggtc gcctcccctt cccgcaccat cagaagccgc
      601 ttgtcgtcgg ggctcagcga gaaggacggc accggccccg ggcgggcgaa gtccgaggct
      661 gggaagagcg tccgctgctt ccccaccgag aaggtggtgc ccggcgggat ctcggccgac
      721 accatctcgc ccctgccatt gaggtagagg agctcccggc cggtgctcgc ccacgccggc
      781 tctctgccgc ccgccgtgga gacctgccac ttggccgtcg cggtctcggg aaacggccgg
      841 acgtagatct cgggcgcccc ggactcgttg gaggagtagg ccagccagcg gccgtccggc
      901 gacagcgcgg ggtagagctc cgcagccggc gtggcgacca gtgggacgag ggtggtgtct
      961 ccgggctgga gccccatgat gtcggtgctc cccggcccga cgggcacggt ccggaagacg
     1021 agccaccggc cgtcgcgcga ggctacgacc tggccgatat ccagcgcgga cgaagcgaac
     1081 agcagccggc caaccccggt gccgtcggcc cggtgggcgt aggtcggccc cacgccggag
     1141 ccggagcggt cgctgacgta caggacctcg cggccgtcgg ccgaccaggc gggacgcaca
     1201 ctcgacgtgt ccccgaaggt gatccgcgag aagggtccct ccgggagctg cttgacccag
     1261 atgtcgcgcc ggccctctcg cgacagtccc acggccaccg ccttcccgtc gggagacagg
     1321 ctggccgctt cgatgacacc ctgcgggtcc caccccgggt ccaccgggct caccccaccc
     1381 tcgcggctga cccagacggc gcgccgggag ccgagcgtcc cccccgtggt atacgcgagg
     1441 gtgccgttgc cggcgagcgt caggtcgatg ttgaagccgc cgttccggac gccgactccc
     1501 tcgagcaggg cgatcggcgc gccggtgagc tccagcttcc cggggtcgaa ggggatggcg
     1561 atcagcttgc cgtccacggt gacgaccagg acatgtccgg tgggggagta ccgggcgtag
     1621 accccccgga ccagcgagcg ggcctccccg cgcggcaggg gcgaggccat gatctcgaag
     1681 tcgcccggac cctggccgac atgacgcagg cggaagagga ccccggtggc gccggggagc
     1741 acgtggaccc actcggtcgc gatctccttc ttgtccggct cgatggtgta caccggctcg
     1801 atctccccgc cggtggcccg cattcgggcg acgcccgagt ccacttcgaa gtagatgtac
     1861 ccgtcgtcgc cccagtcgcc ggacgtggtg ttggccttgt cggtcagcgt cacggtcggg
     1921 gcccccgcga gggacgcgat ccgcacgacc gtcccctcct tgatgaagcc gatccgcttg
     1981 ccgtccgggg agaagaacgg gctggatccg ttct
//
LOCUS       DASUYN010000591         2181 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1069192, whole genome shotgun sequence.
ACCESSION   DASUYN010000591 DASUYN010000000
VERSION     DASUYN010000591.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2181
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1069192"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1926)
                     /locus_tag="VF061_11585"
     CDS             complement(<1..1926)
                     /locus_tag="VF061_11585"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX6670197.1"
                     /translation="MTPSSPESREERYRAFIEQTSEGVWRCELREPIDVRLPVEEQID
                     RIYAHAFLAECNDAMARMYGLDSADQIVGAAIAELLPREDPANLEYLRAFVRSGYRLT
                     DAESHEVGRDGGTYYFLNNLVGIVRDGLLIRAWGSQRDITGRKEIESALRASEERYRA
                     LVTASTSLVWIADAAGRFAARQASWEDYTGQPWTEHRDLGWIEALHPDDRESVRRTWQ
                     RRLQTARQLQEDHVRLWSVEKNAYRHVVIRAVPVLESAGAIREWIGTVSDVEEHWLAE
                     ERLRRAERMETVGRLAGGIAHEANNQMSVILGSAEFVLRHRDLPDVVREDVEHIHRAA
                     ERTAGITRQLLAFSRRQVLQPQVIDLNALVQSAEPILRRTLGERSRLLLQPGSGLGRV
                     KADPGQLEQVLLNLMLNARDAMPQGGAVTIETANVALTPEHAAQKGVATIVPGPHVLL
                     AVGDSGVGMDQQTASRAFEPFFTTKPTGEGTGLGLATVYGIVKQSGGYIWLYSEPGQG
                     TTFRIYLPMVGGSPAGRPRRDSAPVALEGETVLLVEDEPNVRTVLGRVLREQGYTVVE
                     APQGRAALELAASPGSRIDLVVADIVMPELGGRELAEKMGELRPGVPILFISGYTGHD
                     VVERGLIERDWPFLAKPV"
BASE COUNT          294 a          778 c          758 g          351 t
ORIGIN      
        1 gaccggcttg gccaggaagg gccagtcccg ctcgatcagg ccgcgctcca cgacgtcgtg
       61 gccggtgtag cctgagatga agaggatcgg cacgccgggg cggagctcgc ccattttctc
      121 cgccagctcg cggccgccga gctccggcat cacgatgtcg gcgacgacga gatcgatgcg
      181 actcccgggt gaggccgcga gctccagggc ggctcggccc tgcggcgcct ccaccacggt
      241 gtagccctgc tcccggagta cccggcccag caccgtgcgg acgttcggct cgtcctccac
      301 cagcagcacc gtctcgcctt cgagcgcgac cggcgcggag tcgcgcctcg ggcgccccgc
      361 agggcttccc cccaccatcg gcaggtagat cctgaacgtg gtaccctggc ccggctcgct
      421 gtagagccag atgtaccccc cgctctgttt cacgatgccg tagacggtcg ccagccccag
      481 gcccgtgccc tcgccggtgg gcttggtggt gaagaacggc tcgaaggcgc ggctcgcggt
      541 ctgctggtcc atcccgacgc cgctgtcgcc gacggcgagc agcacgtgcg ggccggggac
      601 gatggtcgcg acgcccttct gggcggcgtg ctcgggggtg agcgcgacgt tggcggtctc
      661 gatcgtgacg gcaccgccct ggggcatcgc gtcgcgcgcg ttgagcatca ggttcagcag
      721 cacctgctcc agctgcccgg gatccgcctt gacgcggccg agcccggagc ccggctgcag
      781 cagcagccgc gagcgctccc ccagggtgcg ccgcaggatc ggctcggcgc tctgtaccag
      841 ggcgttgaga tcgatcacct ggggctggag cacctgccgc cggctgaagg cgaggagctg
      901 ccgggtgatg ccggcggtcc gctcggctgc cctgtggatg tgctccacgt cctcccgcac
      961 cacgtccggg aggtcgcggt gccggaggac gaattccgcc gagccgagga tcacggacat
     1021 ctggttgttg gcctcgtgcg cgatgccgcc cgccagacga ccgaccgtct ccatccgctc
     1081 cgcccggcgg agccgctcct ccgccaacca gtgctcttcc acgtcggaaa cggtgccgat
     1141 ccactcccga atggcgccgg cgctctcgag cacgggcacg gcacggatca ccacgtggcg
     1201 atacgcgttc ttctctaccg accagagccg gacgtgatcc tcctggagct gtcgcgccgt
     1261 ctgcagccgg cgctgccagg tccgccgcac cgactcgcgg tcgtccgggt ggagcgcttc
     1321 gatccagccg aggtcgcggt gctcggtcca gggctggccg gtgtagtcct cccacgaggc
     1381 ctgccgcgcg gcgaaccggc cggccgcatc ggcgatccag accagggagg tgctggccgt
     1441 gaccagcgcg cggtagcgct cctcgctggc gcgcagcgcc gactcgatct ccttgcgccc
     1501 ggtgatgtcc cgctgcgagc cccaggcgcg gatcaggagc ccgtcgcgga cgatgcccac
     1561 cagattgttg aggaagtagt aggtcccacc atcacgcccg acctcgtgcg attccgcgtc
     1621 ggtcagacgg tacccgctgc ggacgaaggc gcggaggtac tccaggttgg ccggatcctc
     1681 gcggggcagg agctcggcga tggccgcgcc gacgatctgg tcggcgctgt ccaggccgta
     1741 catccgcgcc atcgcgtcgt tgcattcggc gaggaaggca tgggcgtaga tccggtcgat
     1801 ctgctcttcc accggcagcc gcacgtcgat cggctcgcgc agctcgcagc gccacacgcc
     1861 ctcggaggtc tgttcgatga aagcccggta gcgttcctcg cgcgattcgg gcgatgacgg
     1921 ggtcaatggc gggaggtcgg gagggggccg tccctggcgg ggttgtgatg gttcggcatg
     1981 ttcgctgaag ttactcggcg cctgtggacc ggtccagcac gtgcgttgac cttgccgccc
     2041 cgtgctcggg agccacatcg gagaactctt gcgcggagag ctgctggcga atccgcccga
     2101 gcagccatag cgcttcgttc cctctcggtt tccaacgccc cggctactca tgcccgccat
     2161 agctcgcgtc agtcggcgtg t
//
LOCUS       DASUYN010000592         3311 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_845904, whole genome shotgun sequence.
ACCESSION   DASUYN010000592 DASUYN010000000
VERSION     DASUYN010000592.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3311
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_845904"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..398
                     /locus_tag="VF061_11590"
     CDS             <1..398
                     /locus_tag="VF061_11590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670198.1"
                     /translation="GQRLQEVRGFGRAWLGGTVHQPTSERDWMRGDTVVARFAARDSA
                     GAQRAVLSRIQARKGAQSYHLEPNERAPARPSINYARGDVITVTMKDGSAAGSGVERV
                     DIRGQVDGIQLEADAPAAPADSVAAEERR"
     gene            395..1558
                     /gene="lptB"
                     /locus_tag="VF061_11595"
     CDS             395..1558
                     /gene="lptB"
                     /locus_tag="VF061_11595"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR04406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HEX6670199.1"
                     /translation="MSAPEWIAPLGDRDPSVPIALAAITRAAGAADTVDFGDLVMSYR
                     EAHIACHRPLNGPAQVEITGDEVRDHLTRSVLPRLATEGWILDSPEGTWSPVHPRVPW
                     WGQTPEARQNVYDALLDAARRAAQRAKPVTPKAASASVLEGMDLLKSYKGRRVVDQVT
                     VRVQQGEIVGLLGPNGAGKTTTFYLITGLIRPDDGRVLLDGLDLTRAPMYRRARAGIG
                     YLAQEPSIFRKMTVEENILAILETRDLSRTERQKRLDRMLDELSIKHLRRSKAYSLSG
                     GERRRLEITRALVSEPKFMLLDEPFAGVDPIAVHDIQTIVAGLRHRGIGVLITDHNVE
                     QTLDIVDRAYIMFEGKVQASGSVRDLVYDDRVAQLYLGPTLTARLRARLEAVA"
     gene            1555..3123
                     /gene="rpoN"
                     /locus_tag="VF061_11600"
     CDS             1555..3123
                     /gene="rpoN"
                     /locus_tag="VF061_11600"
                     /inference="COORDINATES: protein motif:HMM:TIGR02395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HEX6670200.1"
                     /translation="MKTGLSQHTSLRQELRVNPRLYQAMDMLYMPMMDLQQHLKQELL
                     SNPFLELLEPEEETPEQKDSEQEKEQKEKEEEMDWEEILLNGFEVGGTREQFEQLEYT
                     EPVTVETKDLIDHLREQLQMLTLTPRQLLLAEEFLGNINEEGYLAASPEEIRHSVNQL
                     VATHVKGESDEEAADDPAPAAPRADVAPVPSADPPEPSASGEAPAPPAEDLPSPPYYS
                     LAEIEEMVGIIQKLDPPGIGARDLRECLLIQLREARDTESLTYRLVDEAFPDLIAHRW
                     NDLAKRFGVEPAAVQTAADGLARLDPKPGLKYSDQSDGYIIPDLIVEKIGTRYQVFLN
                     DTGMPRLRLSRSYQEIARDKKKMTPENREFIASKMNSANWMIQAIEQRRQTMLKVMNF
                     IVDRQRDFFEKGIEYLKPLTLREVAEVINMHESTVSRVTNEKYVQTPRGVLPLKFFFS
                     SALATASGEEASARSIRAKLQKMVAEEDSAKPLTDQQIVHLFQEQGIQIARRTVAKYR
                     DQLGILPARMRKRV"
     gene            3120..>3311
                     /locus_tag="VF061_11605"
     CDS             3120..>3311
                     /locus_tag="VF061_11605"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX6670201.1"
                     /translation="MTLPSEALDVSVLVPAKDEAPNLPEFVRLCAEALGPAGFSYEVV
                     IVNDGSRDDSARVLRELERQ"
BASE COUNT          583 a         1132 c         1138 g          458 t
ORIGIN      
        1 cgggccagcg gctccaggag gtgcgcgggt tcggccgggc ctggctcggc ggcaccgtcc
       61 accagccgac cagcgagcgg gactggatgc ggggcgatac ggtcgtcgcc cgcttcgcgg
      121 cgcgcgattc cgccggagcc cagcgcgccg tgctgagccg gatccaggcc cgcaaaggcg
      181 cccagtccta tcacctcgag cccaacgagc gggcgcccgc gcggccctcg atcaattacg
      241 cccgaggcga cgtcatcacc gtcaccatga aggacggctc ggcagccggc tccggggtcg
      301 agcgggtgga cattcgtggc caggtggacg gcatccagct ggaagcggac gctcctgccg
      361 cgcccgccga ttccgtcgcc gcggaggagc ggcgatgagc gcgccggagt ggatcgcgcc
      421 cctcggcgat cgcgacccgt ccgtgccgat cgccctggcg gcgatcaccc gcgccgcagg
      481 ggccgcggac acggtggact tcggcgacct ggtcatgagc taccgggagg cgcacatcgc
      541 ctgccaccgg ccgctcaacg gcccggcgca ggtcgagatc accggcgacg aggttcgcga
      601 tcacctgacc cgctcggtcc tgccccggct cgccaccgag ggctggattc tggactcgcc
      661 cgagggcacc tggagcccgg tgcacccgcg ggtgccctgg tggggtcaga cgccggaggc
      721 tcggcagaac gtgtacgacg ctctgctcga cgccgcccgc cgagccgccc agcgggccaa
      781 gccggtcacg cccaaggccg cctcggcgag cgtcctggag gggatggacc tgctcaagag
      841 ctacaaggga cggcgagtgg tggaccaggt gaccgtgcgg gtccagcagg gcgagatcgt
      901 ggggctgctg ggtcccaacg gcgcgggaaa gacgacgacc ttctacctta ttacggggtt
      961 gatccgtccg gacgacggcc gggtcctgct cgacgggctc gacctgaccc gggcgccgat
     1021 gtatcgccgg gcccgggccg ggatcgggta cctggcgcag gagccctcga tcttccgtaa
     1081 aatgacggtg gaggaaaata ttcttgcgat cctggagacc cgggacctga gccggaccga
     1141 gcggcagaag cggctggacc ggatgctgga cgagctctcc atcaagcatc tccggcgcag
     1201 caaggcatac tcattgagcg ggggagagcg gcggcggctg gagatcaccc gcgccctggt
     1261 cagcgagccg aagttcatgc tgctggacga accgttcgcc ggcgtggacc cgatcgcggt
     1321 gcacgacatc cagaccatcg tcgccggcct ccgccatcgg ggaatcggcg tcctcatcac
     1381 cgaccataac gtcgagcaga cgctcgacat cgtcgatcgg gcctacatca tgttcgaagg
     1441 caaagtgcag gcatcgggca gcgtgcggga cctggtctac gacgaccggg tggctcagct
     1501 ctatctgggt cccaccctga cggcgcgcct gcgcgcccgg ctggaggcgg tcgcatgaag
     1561 accggcctct cccagcacac cagccttcgc caggagcttc gggtcaaccc gcggctctac
     1621 caggcgatgg acatgctgta catgccgatg atggacctcc agcagcacct caagcaggag
     1681 ctgctctcca accccttcct cgagctgctg gagccggagg aggagacgcc ggagcagaag
     1741 gactcggagc aggagaagga gcagaaggag aaggaagagg agatggactg ggaggagatc
     1801 ctcctcaacg ggttcgaggt cggcggcacc cgggaacagt tcgagcagct ggagtacacc
     1861 gagccggtca cggtcgagac caaggatttg atcgatcacc ttcgcgagca gctccagatg
     1921 ctcacgctga cgccgcgcca gctcctcctg gcggaggagt tcctcggcaa catcaacgag
     1981 gaggggtacc tcgcggcctc gccggaggag atccggcatt cggtgaacca gctggtggcc
     2041 acgcacgtga agggcgagtc cgacgaggag gcggcggatg accccgcgcc ggcggcgccg
     2101 agggccgacg tcgctccggt cccctcggcc gacccgccgg agccgtccgc gtcgggtgag
     2161 gccccggcac cgccggccga ggacctcccg tcgccgccgt actattcgct cgccgagatc
     2221 gaggaaatgg tcggcatcat ccagaagctg gatccgccgg gcatcggcgc ccgcgacctg
     2281 cgcgagtgcc tcctgattca gctccgggag gccagggaca ccgagtcgct cacctaccgc
     2341 ctggtggacg aggcgttccc ggacctgatc gcccaccgct ggaacgacct cgccaagcgg
     2401 ttcggcgtgg agccggcggc ggtccagacc gcggccgacg gcctcgcgcg gctggacccg
     2461 aagcccggcc tcaagtactc cgaccagagc gacggctaca tcattcccga cctcatcgtc
     2521 gagaagatcg gcacccgcta ccaggtcttc ctcaacgaca ccggcatgcc ccggctccga
     2581 ctgagccgct cctatcagga gatcgcgcgc gacaagaaga agatgacccc ggagaaccgg
     2641 gagttcatcg cctcgaagat gaacagcgcg aactggatga tccaggcgat cgagcagcgg
     2701 cggcagacga tgctcaaggt gatgaacttc atcgtggacc ggcagcgtga cttcttcgag
     2761 aagggcatcg agtacctcaa gccgctcacc ctgcgcgagg tcgccgaggt catcaacatg
     2821 cacgagtcca cggtgagccg ggtgaccaac gagaagtacg tgcagacgcc ccgtggcgtg
     2881 ttgccgctca agttcttctt ctccagcgcc ctcgccaccg cctccggcga ggaggccagc
     2941 gcgcggtcca tccgggccaa gctccagaag atggtggccg aggaggacag cgcgaagccg
     3001 ctcaccgatc agcagatcgt tcacctcttc caggagcagg gcattcagat cgcccgccgc
     3061 accgtggcca agtaccggga tcagctcggg atcctgccgg cgcgcatgcg gaagcgcgta
     3121 tgacccttcc ttccgaggcg ctggatgtca gcgtcctcgt gccggccaag gacgaggccc
     3181 ccaacctccc cgagttcgtc cggctctgcg ccgaggccct cgggcccgcc gggttctcct
     3241 atgaggtagt gatcgtgaac gacggctccc gcgacgacag cgcgcgggtg ctgcgggagc
     3301 tggagcggca g
//
LOCUS       DASUYN010000593         2891 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_627397, whole genome shotgun sequence.
ACCESSION   DASUYN010000593 DASUYN010000000
VERSION     DASUYN010000593.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2891)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2891)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2891
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_627397"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..427
                     /locus_tag="VF061_11610"
     CDS             <1..427
                     /locus_tag="VF061_11610"
                     /inference="COORDINATES: protein motif:HMM:NF024245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HEX6670202.1"
                     /translation="HRLYQADHLVRGYGFGVDEVVFEPTGNLPLAVDPKTAWAIAHPE
                     RFPVEIRTAALEELLRVPGIGPTSARRIVAERPAASFRSLADLRKLGVITNRAAGFIT
                     LGGRRVQTSRWTQQLGFWGPEEQVGMPHLVYQVSPGTFR"
     gene            complement(420..1949)
                     /locus_tag="VF061_11615"
     CDS             complement(420..1949)
                     /locus_tag="VF061_11615"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX6670203.1"
                     /translation="MADDLLELFFRTTEDYAVIVLDPNAMVRRWNPGAERIFGWASDE
                     VVGTDGHRIFVAADRRAGVPEMELRTAAQSGRAEDERWHLRKDGSRFWASGLLVALPE
                     DGEVRGYIKVVRDFTDRRRLDEAAREAQKLESIGVLAGGIAHDFNNILTAIIGNLSLA
                     RTALANSSVQELDGLLAEAERAGRRAEDLVKQLLDYVGKGRREVRPVDIARVVTDAVS
                     IVRASVSPRIRIALDAPTSVWIRADAGQVQQLILNLVLNAAEAIGDGTGRIEIRLRAR
                     EILEAELRGRYLGFPLPPRRYAEIFVRDDGQGMDERTLRQIFDPFFTTRFLGRGLGLA
                     VALGVVRAHGGGIAVESAPGGGSAFTVVLPAEQDLEGPKTVSEAVTDAARGEGLVLVV
                     DDEPGIRSLVHRALENLGYTVLLAEHGGQALELVDRSPDPISLVLLDLAMPVMDGPET
                     AAELQQRLPDLPIIVMSGLADQEALRGLERVRIAGFVPKPFAPEQLAQAVALARRPKA
                     T"
     gene            2089..>2891
                     /locus_tag="VF061_11620"
     CDS             2089..>2891
                     /locus_tag="VF061_11620"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEX6670204.1"
                     /translation="MTTATHTNEPVGAAEWAREGNGSRSSDGERLAKALGLFSVGLGL
                     TQVLAPHGMARAIGIDDDDDNRKTMRALGLRELATGVGLLTQRRPTTFAWGRVTGDAM
                     DLALLGRAFASGRNDNRRLAAATAAVAGVMVLDIIAGQRLARQEEGVGIEARPRERGV
                     RVLKAITINRTPEEVYGFWRDLENLPRFMVHLESVRELDQRLSYWKMRAPFGTTVEWT
                     AEIVEDRPNELISWRSVEDSQVPNSGIVRFTPAPGDRGTEVQLEVRYDPP"
BASE COUNT          457 a         1024 c          995 g          415 t
ORIGIN      
        1 gcaccgcctc taccaggccg atcacctggt tcgtggctac ggcttcggtg tggacgaggt
       61 cgtcttcgag cccacgggca acctgccgct ggcggtggat ccgaagaccg cctgggccat
      121 cgcccacccc gagcggttcc cggtcgagat ccgcaccgcc gccctggagg agctgctccg
      181 ggtgccggga atcggcccca catcggctcg gcggatcgtg gcggagcgcc cggccgcgag
      241 cttccgctcc ctggccgacc ttcggaagct cggtgtgatc accaaccggg cggcgggatt
      301 catcacgctg ggagggcggc gggtccagac ctcgcgctgg acccagcagc tgggcttctg
      361 ggggcccgag gagcaggtgg ggatgcccca cctggtgtat caggtgagtc cgggcacgtt
      421 caggtagcct tgggccggcg ggcgagcgcc accgcctggg ccagctgctc cggagcgaag
      481 ggcttgggga cgaacccggc gatgcggacc cgctccagac cccgcagggc ctcctggtcg
      541 gccaggccgc tcatcacgat gatcggcagg tcggggaggc gctgctggag ctcggctgcg
      601 gtctccgggc cgtccatcac cggcatcgcg agatccagca gcaccagcga aatcggatcg
      661 ggagaacgat ccaccagctc gagcgcctgt ccgccgtgct cggccagaag gaccgtgtag
      721 cccaggttct ccagggcccg gtgcaccaga ctcctgatcc ccggctcgtc atccaccacc
      781 agcaccagac cttcgccgcg agcggcgtcc gtcaccgcct ccgacacggt cttcggcccc
      841 tcgagatcct gctccgccgg aaggaccacg gtaaatgcgg atcccccgcc gggcgcgctt
      901 tccacggcga tgccgccgcc atgggcccgg acgacaccca gcgccaccgc caagcccagc
      961 ccccgcccga gaaacctggt ggtgaagaaa gggtcgaaga tctgtcggag cgtgcgctcg
     1021 tccatgccct ggccgtcgtc gcgtacgaag atctccgcat accgccgcgg cgggaggggg
     1081 aatcccaggt accggccacg cagctcggcc tcgaggatct cccttgcccg cagccggatc
     1141 tcgatccgac ccgtcccgtc gccgatggcc tcggcggcgt tgagcacgag gttcaggatc
     1201 agctgctgga cctggcccgc atcggcgcgg atccagaccg atgtcggcgc gtcgagcgcg
     1261 atccggatcc tgggcgatac cgacgcccgc acgatactga cggcgtcggt gacgaccctg
     1321 gcgatatcga cgggacgcac ctcccgccgc cccttcccca cgtagtcgag cagctgcttc
     1381 accaggtcct ccgcgcgccg gcccgcgcgc tccgcttccg cgagcaggcc gtccagctcc
     1441 tggacgctcg agttggccag ggcggttcgc gccagggaga gattcccgat gatggcggtc
     1501 aatatgttgt tgaagtcgtg ggcgatcccc cccgccagca cgccgatgct ctcgagcttc
     1561 tgcgcttcgc gtgccgcttc gtcgagccgc cgccggtcgg tgaaatcccg aaccaccttg
     1621 atgtagccgc gcacctcgcc gtcctccggc agtgcgacca ggagacccga agcccagaag
     1681 cgggagccgt ccttgcgcag atgccagcgc tcgtcctcgg cgcgaccgct ctgcgccgcc
     1741 gtccggagct ccatctcggg cacgccggct cgccggtcgg cggccacgaa gatccggtgc
     1801 ccgtcggtgc cgacgacctc gtcggatgcc cacccgaaga tgcgctccgc gccggggttc
     1861 cagcgccgta ccatcgcatt ggggtcgagc acgatgacgg cgtaatcctc ggtggtgcga
     1921 aaaaacagct ccaacaggtc atcggccatg gcgcgttcga taacccgggg aagccctgag
     1981 cgatatgtca ggggtccagc atagccggtg accgtgctca cagaccgggg gcgtacgcga
     2041 gagctaatca aggcccgagt cggcatacgc tccaggaaag aggaaacaat gaccacagcg
     2101 acacatacca acgagcccgt cggcgcggcg gagtgggcgc gcgagggcaa cgggagccgg
     2161 tcaagtgacg gggagcggct ggccaaggcc cttggcctct tcagcgtcgg cctgggattg
     2221 acccaggtcc tcgcgcccca tgggatggcc cgcgcgatcg ggatcgacga cgacgacgac
     2281 aatcggaaga cgatgcgggc cctcggcctc cgcgagctcg cgaccggagt ggggctgctc
     2341 acccagcggc gccccacgac cttcgcgtgg ggccgggtga ccggcgatgc gatggacctg
     2401 gccctcctgg gccgcgcctt cgcttccgga cggaacgaca accgccgcct ggccgccgcg
     2461 acagcggccg tcgcgggggt gatggtgctg gacatcatcg cgggccagcg gctggcccgg
     2521 caggaagagg gggtggggat cgaggcgcgg ccgcgcgagc gtggcgtccg ggtactgaag
     2581 gcgatcacca tcaaccgtac gcccgaggag gtctacggct tctggcgcga cctggagaac
     2641 ctcccccgct tcatggtgca cctggagtcg gtgcgggagc tggaccagcg gctgtcctac
     2701 tggaagatgc gggcgccgtt cgggaccacc gtggaatgga cggccgagat cgtcgaggac
     2761 cggcccaacg agctgatctc ctggcgctcc gtcgaagact cccaggtgcc gaactcgggc
     2821 atcgtgcgct tcacaccggc gccgggcgat cgcgggaccg aggtgcagct cgaggttcgc
     2881 tacgatcccc c
//
LOCUS       DASUYN010000594         2428 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1069474, whole genome shotgun sequence.
ACCESSION   DASUYN010000594 DASUYN010000000
VERSION     DASUYN010000594.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2428)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2428)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2428
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1069474"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1585)
                     /locus_tag="VF061_11625"
     CDS             complement(<1..1585)
                     /locus_tag="VF061_11625"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEX6670205.1"
                     /translation="MAHRIDTSAASPAGATPPETVASWLRRLPLVAGGGATLLGLAAV
                     ESYVFGAGPPSSPTMYLPQTVPLAAVMFVLTGGSLLSHQAGLPRHQKATAGAVIVLAS
                     LVLLEYVIWWDIGFDTLLFPDDVLRVASAFPGRPSPLTAACFLLLGLTLVMAVNGRHQ
                     QYRTAHVAALMAAGGLPLIAVVGHVVGVEELYTFAPGVGLSLAAALLLLLLTAGIVAA
                     THRSALFELVAGRDPGTILLRRLLPLAVMIPLLFAAGSLLALRLGFYQKHVVLALFIG
                     VFVGLSLLAAFRFAGVVRRADAERRAAQWAEAERELGERLLQTEQAAGAAMRESVRQT
                     RELLDILNHAPVLARGLDGRIQFWSAGAHRLYGWEEREAIGADARALLHTELPVPEEE
                     AATALLERGEWHAELSRRSRSGARVQVASHWFLHRDADGSAGAVIEVDNDVTELKHAE
                     EALRQGEARYRALVAAAAQIVWTASADGRRPIDTSQWEAFTGQTGSEATWGGWFEAIH
                     PDDREEALRAWSAAVAGRRP"
     gene            complement(1681..2289)
                     /locus_tag="VF061_11630"
     CDS             complement(1681..2289)
                     /locus_tag="VF061_11630"
                     /inference="COORDINATES: protein motif:HMM:NF025774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MEDS domain-containing protein"
                     /protein_id="HEX6670206.1"
                     /translation="MTSWAELLTGAGPGEHVVQLYGEDDQLLARNASRYLAEGLRRGD
                     GLVVIATPEHIRAIARHLVEEDAASALAAASNGRLRYLEAEHTLADLLVAGRPDETRF
                     RTVIGGAIAGVRARSATGAARAFGEMVGLLWNQERYEDAERLERLWNAVLAEYGCSLF
                     CAYRIDLFEPGGDAAELHSIIGSHHRILAGTGTLLSSGRPRA"
BASE COUNT          368 a          902 c          855 g          303 t
ORIGIN      
        1 gcggccggcg ccccgccacc gccgcactcc aggcgcggag cgcctcctca cggtcgtcgg
       61 ggtggatggc ctcgaaccag ccgccccatg tcgcctcgga ccccgtttga ccggtgaatg
      121 cctcccactg gctggtgtcg atcgggcggc ggccgtccgc cgaggccgtc cacacgatct
      181 gggcggcggc cgcgaccaga gcccggtacc gcgcttctcc ctgccgcagc gcctcctcgg
      241 cgtgcttcag ctcggtgacg tcgttgtcca cctcgatcac cgcgcccgcg ctgccgtccg
      301 catcgcggtg caggaaccag tggctcgcca cctgcacccg ggcaccgctg cgggagcggc
      361 gggagagctc ggcgtgccat tcaccccgct cgagcagggc ggtcgccgcc tcttcctcgg
      421 ggaccggcaa ctcggtgtgc agcagcgcgc gggcgtcggc cccgatcgcc tcgcgctcct
      481 cccacccgta gaggcggtgg gccccggcgc tccagaactg gatccggccg tcgagacccc
      541 tcgcgaggac cggcgcgtgg ttcaggatgt cgagcagctc ccgggtctgc cgcacgctct
      601 cgcgcatcgc cgcgcccgcc gcctgttcgg tctggagcag ccgctcaccc agctcccgct
      661 ccgcctcggc ccactgcgcc gcccgccgct cggcgtcggc gcggcgcacc acgccggcga
      721 agcggaacgc cgccagcagc gagagcccga cgaacacgcc gatgaacagc gccagcacca
      781 cgtgcttctg atagaagccg agtcgcagtg cgaggagact gccggccgcg aagagcagcg
      841 ggatcatcac ggccaggggc agcagccggc gcagcaggat cgtgcccgga tcccggccgg
      901 cgaccagctc gaacagcgcg gaccggtggg tggccgccac gatgccggcc gtgagcaaca
      961 ggagcaggag agccgccgcg agcgagaggc ccacacccgg cgcaaaggtg tagagctctt
     1021 ccacccccac cacgtggccg accaccgcga tcagcggaag cccgcccgcg gccatgagcg
     1081 cggccacgtg ggccgtccgg tactgctggt ggcggccgtt cacggccatc accagagtca
     1141 gaccgaggag caggaagcag gcggccgtca gcggcgacgg ccgcccgggg aaggccgagg
     1201 cgacccgcag gacgtcgtcg ggaaacagca gggtgtcgaa gccgatgtcc caccagatga
     1261 cgtactcgag gaggaccagc gaggccagca cgatcacggc gccggccgtg gccttctggt
     1321 ggcgggggag cccggcctgg tgggagagca gactcccgcc ggtgagaacg aacatgacgg
     1381 cggcgagcgg aaccgtctgc gggaggtaca tcgtcggcga gctgggagga ccagcgccga
     1441 atacatagga ttcgacggcg gccaagccga gcagcgtcgc cccgccgccg gcgacgagcg
     1501 ggaggcggcg cagccacgac gcgaccgtct cgggcggagt ggctcccgcc ggggacgccg
     1561 cggatgtgtc gatccggtgg gccatgcccg ctcgagctga ggccgatacg ccagggggtc
     1621 gtgaaaactt acacgggacg ccccccccgc gtcacgcgct cactgtcgct cagtcgggtc
     1681 tcaggcgcgc gggcggccgc tggaaaggag ggtgccggtg ccggcgagga tccggtggtg
     1741 ggagccgatg atcgagtgca gctccgccgc gtcgccaccc ggctcgaaga ggtcgatgcg
     1801 gtaggcgcag aacaggctgc acccgtactc ggccaggacc gcgttccaga gccgctcgag
     1861 gcgctcggcg tcctcgtacc gctcctggtt ccagaggagg cccaccatct cgccgaaggc
     1921 gcgcgcggcc cccgtcgcgg agcgcgcccg gacccccgcg atcgcgccgc cgatcacggt
     1981 ccggaaccgg gtctcgtccg gccggccggc cacgagcagg tccgccagag tatgttccgc
     2041 ctccaggtag cggagccgcc cgttgctcgc cgccgccagc gccgaggccg cgtcctcctc
     2101 tactagatgc cgtgcaatgg cgcggatatg ttcgggagtg gcgatcacga ccagtccgtc
     2161 accgcgacgg agtccctccg cgaggtagcg gctggcgttt cttgccagca gttgatcgtc
     2221 ctcgccgtag agttgaacca cgtgctctcc cggcccggcg cccgtcagga gctccgccca
     2281 cgatgtcatc cgccatcctc cagaagccgg ccctcgttcg aaacgcgcta cctaaatggg
     2341 gccggtgacc ggagttggcg gtgagcggag tcacccgggc cgccgcgacc ccacctcgac
     2401 cctcacgccg gacgtcatcc cattgatc
//
LOCUS       DASUYN010000595         2070 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1512330, whole genome shotgun sequence.
ACCESSION   DASUYN010000595 DASUYN010000000
VERSION     DASUYN010000595.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2070
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1512330"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1128
                     /locus_tag="VF061_11635"
     CDS             <1..1128
                     /locus_tag="VF061_11635"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX6670207.1"
                     /translation="VPDSVARYELGVMVANGVTATRFMIGTPEHFTLRRQVEAGRIVG
                     PQLWLASPQFTGKEDVNSRVVTTPEDARTAVKEMADLGYDFIKLTLFITPPVYDAIVD
                     EARRQNIRVVGHVDPQIGVARALKAGQQIEHLDNYLESVLADSAPMKASVSDRGLFNP
                     EYWESLDWIDDAKVDSIAGATARAGIFTCPTLVVFKTAFALGQTEAEVRARPDWGIMP
                     PEMRRLYLGAREKYWARAASEPRRMRYVQVRDRLVKAIADSGGKIMAGSDTPEWFFGY
                     GWTIHREMESLVAAGLTPHQALAAATRNPAEFLRASKEWGTIEKGKRADLVLVAGNPL
                     EDIRNTARIEGVSVGGRWLDNAERERMIGEAVKRLGGDEVS"
     gene            complement(1137..>2070)
                     /locus_tag="VF061_11640"
     CDS             complement(1137..>2070)
                     /locus_tag="VF061_11640"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX6670208.1"
                     /translation="PLEFAPGETWRYSNTGYALLGFLVRRATGRFYGDLLRERIFEPL
                     GMGSARVISEHDIVPNRAAGYELVEGRIRNQQWVSPTINTTADGSLYLSVGDLARWAI
                     ALNQRRLPDSTALALSWTPVRLQHGGTYPYGFGWSLDQQRGQPRIGHTGAWQGFKTSI
                     QRYPESGLTVIALANLDAALPAPVSFAVAGILEPALLPPHLMPATRAGPPQPIRALLA
                     AVAGDSAGARLTPGLRRFIPASMREEWRQGLSEVRRWESVGCDEVSARRLERLGGRVA
                     RVCYARALGDRFRRLVSVAYTADWVATDLDSYSY"
BASE COUNT          324 a          696 c          773 g          277 t
ORIGIN      
        1 gtgccggact cggtggcgag gtacgagctg ggggtgatgg tggcgaacgg cgtgaccgcc
       61 acccgcttca tgatcggcac gccggagcac ttcaccctcc ggcgccaggt cgaggccggc
      121 cgcatcgtgg gcccgcagct ctggctcgcg agcccgcagt tcaccgggaa ggaggacgtg
      181 aacagccggg tggtgacgac gccggaggac gcgcggacgg cggtgaagga gatggcggat
      241 ctcggctacg acttcatcaa gctcacgctg ttcatcaccc cgccggtcta cgacgcgatc
      301 gtggacgagg ccaggcgcca gaacatccgc gtggtgggcc acgtggatcc ccagatcggc
      361 gtcgcccggg ctttgaaggc gggccagcag atcgagcacc tggacaacta cctcgagtcg
      421 gtgctcgcgg actccgcgcc gatgaaggcc tcggtctccg atcgcgggct gttcaacccc
      481 gagtactggg agagcctcga ctggatcgac gacgccaagg tggacagcat cgccggcgcg
      541 accgcccgag ccggcatctt cacctgcccc acgctggtcg tcttcaagac ggcgttcgcc
      601 ctggggcaaa cggaggcgga ggttcgcgcc cggccggact ggggcatcat gccgcccgag
      661 atgcgccggc tgtacctggg tgcgcgggag aagtactggg cccgggccgc gagcgagccg
      721 aggcggatgc gctacgtgca ggtgcgcgac cggctggtga aggcgatcgc ggactccggc
      781 gggaagatca tggcgggctc cgatacgccg gagtggttct tcggctacgg ctggacgatc
      841 caccgggaga tggagagcct ggtcgcggcc ggcctcaccc cgcaccaggc gctcgcggcg
      901 gcgacgcgca atccggcgga gttcctccgg gcgtcgaagg agtgggggac catcgagaag
      961 ggcaagcggg ccgacctggt gctcgtggcc ggcaatccgc tggaggacat ccggaatacc
     1021 gcgcggatcg aaggggtgtc ggtcggcggc cgatggctcg acaacgcgga acgggagcgg
     1081 atgatcggtg aggccgtgaa gcggctgggc ggggacgaag tgtcgtgacg gattgatcaa
     1141 tacgagtagg agtccaggtc cgtcgcgacc cagtcggcgg tgtacgcgac cgagaccaga
     1201 cgccggaacc ggtcgcccag ggcgcgcgcg tagcacaccc gggcgacccg cccacccagg
     1261 cgctcgagcc gccgtgcact cacctcgtcg cagccgacgc tctcccagcg gcggacctcg
     1321 ctgagcccct ggcgccactc ctccctcatg ctcgccggga tgaacctgcg gagtcccggc
     1381 gtgagccggg ccccggcgct gtccccggcc accgcggcga gcagcgcccg gatcggctgc
     1441 gggggaccgg cacgggtcgc cggcatcagg tgcggcggca ggagcgccgg ctccaggatc
     1501 cccgcgacgg cgaaggagac cggcgcgggc agcgccgcgt ccaggttcgc cagcgcgatc
     1561 acggtgagtc cggactcggg gtagcgctgg atgctggtct tgaagccctg ccaggcaccg
     1621 gtgtgcccga tgcgcggctg tccgcgctgc tgatcgagcg accacccgaa cccataggga
     1681 taggtccccc cgtgctggag ccggaccggc gtccagctca gcgcgagcgc cgtgctgtcc
     1741 ggcaggcggc gctggttgag cgcgatcgcc cagcgggcaa ggtcgccgac ggagaggtag
     1801 agggatccgt ccgcggtggt gttgatcgtg ggtgagaccc actgctggtt ccggatccgg
     1861 ccctccacca gctcgtagcc cgccgcccgg ttggggacga tgtcgtgctc cgagatgacc
     1921 cgcgcgctcc ccatgcccag cggctcgaag atccgctccc gcagcaggtc tccgtagaaa
     1981 cgcccggtcg cgcggcggac gaggaagccg agcagcgcat agccggtgtt gctgtagcgc
     2041 caggtctccc ccggcgcaaa ctccagcggc
//
LOCUS       DASUYN010000596         7805 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_628811, whole genome shotgun sequence.
ACCESSION   DASUYN010000596 DASUYN010000000
VERSION     DASUYN010000596.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7805)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7805)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7805
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_628811"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..332)
                     /locus_tag="VF061_11645"
     CDS             complement(<1..332)
                     /locus_tag="VF061_11645"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX6670209.1"
                     /translation="MPPLAGRVALVAGATRGAGRGIAIELGAAGATVYCTGRTTRSHR
                     SEYDRPETIEETAEAVTAAGGHGIPVQVDHLDPEQVRSLVARIDAGHGRLDVLVNDIW
                     GGELLIQW"
     gene            complement(379..1326)
                     /locus_tag="VF061_11650"
     CDS             complement(379..1326)
                     /locus_tag="VF061_11650"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase family protein"
                     /protein_id="HEX6670210.1"
                     /translation="MDILQAIGNTSLVRLRKVVPPGCADLFLKLEWENPTGSVKDRMA
                     KAVITRAEADGRLRPGDTVIEYTGGSTGASLALVGAARGYRIRVITSDAFSREKLDQM
                     AAYGAELTLLPSEGGRTTRKLILEMIEAARALSREPRTYWTDQLNNHDSVAGYHPLGD
                     EIWSQTWGRVDAFVHCVGTAATVRGVATVLRRHRPEIEIVAVEPAESPVLSGGEPGPH
                     KIEGVGIGYIPPLWDPSLVSSIVPIPTEEAKAMARRLAREEGVFAGTSAGANVLAALQ
                     VGRRLGPGATVVTLAADSGLKYLGTDVYRRNPQRPPQAE"
     gene            complement(1480..2598)
                     /locus_tag="VF061_11655"
     CDS             complement(1480..2598)
                     /locus_tag="VF061_11655"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EthD family reductase"
                     /protein_id="HEX6670211.1"
                     /translation="MVKLVYCIRRKPGLTQAEFFRHWAEVHAPIGVRIPGLRKLVHSY
                     AVTIAADSRPADFDGMAELWFDDVPALLEARRSPEWAASTADEANFVDLSHTAYFVSE
                     ERQMPKEVPLYDAHYGHLTADPQVAVRRRTYDEDLGQASWLTAAEATAFFGLLGLGPG
                     RTALELACGSGGVTCRMALETGATCVGVDLNSHGIEAARARAAEQGLSSSVSFERTDA
                     SRRLPFPDQSFDAVFCNDSINHFPGRLEVLRDWHRVLRPGGRVLFTDPIVVTGQLTNE
                     EIQARSSIGFFLYTPVGGNERLLAQSGFDVREVRDVTEAVASVSARWRAAREELRPAL
                     VALEGEESFAGVQRFLAVVHTLSSERRLSRFMYLAERA"
     gene            2705..3520
                     /locus_tag="VF061_11660"
     CDS             2705..3520
                     /locus_tag="VF061_11660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670212.1"
                     /translation="MTPIKVGPWRLPLAALLFLPPACSPATSAEPEAGHSVLFVGNSL
                     TYTNDLPAMVEQLAEAAGDSIRVGMAAGPNMAVIDHTIGATEAIAQIRQGDWSFVVLQ
                     QGPTPAGICRDTLIIAAMRLAPRIRDAGGRPVLFWPWTRQAFPQTLEAAGESATAAAR
                     AVGGMVAPVGTAWREALDADRDLPLYGSDGYHPAPAGTLLAALTLYDRLFGRDVRSIA
                     ALDLAAIAGVPIGPGRLEAMAAAAHAASAELAPDPRVPAPPDTTRVSSTGGPC"
     gene            complement(3517..4068)
                     /locus_tag="VF061_11665"
     CDS             complement(3517..4068)
                     /locus_tag="VF061_11665"
                     /inference="COORDINATES: protein motif:HMM:NF001095.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaiI/YqxD family protein"
                     /protein_id="HEX6670213.1"
                     /translation="MGDRAPRPAGRRGRERRLQPYRQGSGVELKIWIDADAAPRDVKE
                     LVFRAARRLTLETVLVANQRLQPPAGNPLVRAVRVDGGADVADRYIADHATPGDLVIT
                     QDVPLAALLVPRRIAVLDPRGEEHTMETIGERLSVRDFMEQARIAGVVTGGPSPYDAR
                     AKQAFAAALDRTLTRLRRSTPPS"
     gene            complement(3981..4724)
                     /locus_tag="VF061_11670"
     CDS             complement(3981..4724)
                     /locus_tag="VF061_11670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670214.1"
                     /translation="MTRAAGRVDVYLEVGGKRVFACAVHWPGWCRSGADEATALQALL
                     DCGPAYAAVVRPARLGFAAPSRLEQLRVVERLAGNATTDFGVPGAIPSADRERAGAGD
                     GARLEKLLRAGWRALDAARKRAAGKPLRKGPRGGGRDLDAIVRHVAEAERGYLSALGW
                     KTAPPGKSADPVGDIRNAVIEGLRASLGGEIPETGPRGGKRWPAPYFARRLAWHAIAH
                     AWEIERRALPGGAAVSAVSSRTDKGVGSN"
     gene            complement(4746..5126)
                     /locus_tag="VF061_11675"
     CDS             complement(4746..5126)
                     /locus_tag="VF061_11675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670215.1"
                     /translation="MTQGEFVEMLDDLAGAWARRDYTAAAGWFTADVRYADPLRYAFT
                     SRAALLAFFEADDGYPQRTVWHTRLFDEVHQRGVAEYTYDGTRRYHGVALIRLAGDRV
                     SHWREYQHVDSRTWEDFSAGTAGL"
     gene            complement(5155..5718)
                     /locus_tag="VF061_11680"
     CDS             complement(5155..5718)
                     /locus_tag="VF061_11680"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX6670216.1"
                     /translation="MTAGVSADRTLVLRDGRTVRIRRTEPDEAAAVLAYLCRVGGETV
                     NLTFGAEGPGIGVEEEREYLTRVAASDNALAIVAVLGGEIVGALTFDGGRRPRMRHVG
                     EFGISVLQAYTGQGIGKALMEYMIRWAETGGVVRKINLKVRVDNTAAIRLYEQMGWVP
                     EGRTTRDTLIDGEFNDCLMMGRDVDPA"
     gene            complement(5715..6086)
                     /locus_tag="VF061_11685"
     CDS             complement(5715..6086)
                     /locus_tag="VF061_11685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HEX6670217.1"
                     /translation="MPPTPLARLRKVCLALPEAHEVEAWGEPTFRVRNKLFAMYAASN
                     NHHGGGRPAVWCKAAPGNQALMVRAEPDRFFVPPYVGPSGWVGVWLDRRPDWSEVREL
                     MRDSYRLVAPKKLAAQLEDRG"
     gene            complement(6114..6575)
                     /locus_tag="VF061_11690"
     CDS             complement(6114..6575)
                     /locus_tag="VF061_11690"
                     /inference="COORDINATES: protein motif:HMM:NF021495.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2214 family protein"
                     /protein_id="HEX6670218.1"
                     /translation="MLVRWLFAWLHLLGLGIGLGAVWARARALRGPLDTAGLRRVFYA
                     DGWWGVAAAIWIGTGLVRVIGGLEKGMDYYLQNHVFWGKMTLLLAILVLEIPPMLTFI
                     RWRVQVARGESPDTAVAGRYARISYLQAALVLLMVLAASAMARGVGALPAE"
     gene            6675..6878
                     /locus_tag="VF061_11695"
     CDS             6675..6878
                     /locus_tag="VF061_11695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670219.1"
                     /translation="MKRNPMALAVTLALMLACGERTSERDAGTARAGVEDTTAAPSTD
                     LGVPSRDTAADTGSATDTGGRPR"
     gene            complement(6892..>7805)
                     /locus_tag="VF061_11700"
     CDS             complement(6892..>7805)
                     /locus_tag="VF061_11700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670220.1"
                     /translation="RAAAPDSVIEPWDWYHLAGRPARTLGARVTRERITALNAAIYRA
                     VGADVGALNVRYDLEPREGKTPVAFCTFGARPRQVGGRWTPGEPSVFATYRTGGLDNL
                     TELLHETGHAIHIAAIRTRPAFADWPDSDPFTEAVADFVALDVAEPEWQQRWLGDSVP
                     LRDGLRSRYGSIVLDVAWSLFELRMLREPSADPNQVWTRLTSEYLRIRPHPELSWWAM
                     RGQLVDSPGYMMNYAVGAILIAALRARAVELEGSWMLGDPGWYEWISSALFRFGLERP
                     TREVIEEFLGGPVTPAALLEDMGRMQP"
BASE COUNT         1129 a         2872 c         2706 g         1098 t
ORIGIN      
        1 ttccactgga tcagcagctc ccctccccag atatcgttga ccagcacatc cagccgccca
       61 tgaccggcgt cgatccgggc caccagcgag cggacctgct ccggatccag atgatccacc
      121 tgaaccggga tgccgtggcc ccccgcggcg gtcaccgcct ccgccgtctc ctcgatggtc
      181 tcggggcggt cgtactcgga gcggtggctg cgggtggtgc ggccggtgca gtacaccgtc
      241 gccccggcgg cgcccagctc gatggcgatg ccgcggccgg cgccccgggt ggctccggcg
      301 accagcgcga cgcgtccggc gagtgggggc atggttctca ctggctcaag cgtgaggtga
      361 aagctcgcgc acgccgcctc actcggcctg gggaggacgc tgcgggttcc ggcggtacac
      421 gtcggtgccg aggtacttga gcccggaatc ggccgccagg gtgacgaccg tggcgccggg
      481 gccgagccgc cgccccacct ggagggcggc cagcacgttg gcgccggccg aggtgccggc
      541 aaagacgccc tcctcccgtg cgaggcgccg ggccatcgcc ttggcctcct cggtcgggat
      601 cggcacgatg ctgctcacca gcgacgggtc ccagagcggc ggaatgtagc cgatcccgac
      661 cccctcgatc ttgtgtggcc cgggctcccc accggacagc accggcgatt ccgccggctc
      721 cacggcgacg atctcgatct ccgggcggtg tctcctcagc acggtggcga ccccgcgcac
      781 cgtggccgcc gttcccacgc agtggacgaa cgcgtccacc cgtccccagg tctggctcca
      841 gatctcgtcg cccaggggat ggtaaccggc gacgctgtcg tgattgttga gctgatccgt
      901 ccagtaggtg cgcggttccc ggctcagcgc gcgggcggcc tcgatcatct ccagaatcag
      961 cttcctggtg gtgcgtccgc cctcgctcgg cagcagcgtg agctccgcgc cgtaggccgc
     1021 catctggtcc agcttctcgc ggctgaacgc gtcggaagtg atgacccgga tccggtaccc
     1081 cctggcggcg cctaccaggg ccagggatgc gccggtgctg ccgccggtgt actcgatcac
     1141 ggtgtcgccg ggccggagcc ggccgtcggc ctccgcgcgc gtgatgacgg ccttcgccat
     1201 cctgtccttg acgctgccgg tggggttctc ccactcgagc ttgaggaaga ggtcggcgca
     1261 gcccggcggc acgaccttcc gcagccggac gagtgaggtg ttaccgatcg cctggaggat
     1321 gtccataggg cagaagtagg gggaccgccg tcagcggagt ggggcgcgca gccggccgac
     1381 agcatgatcg tcgtccaggc gagcgcgctc gcccggacca cactgagcag catgagggag
     1441 tataccctga agttgcagac ggcaggccgc gccgtgaagt caagcgcgct cggcgaggta
     1501 catgaagcgc gacaggcgcc gctcgctgga gagcgtgtga actacggcca ggaagcgctg
     1561 gacgccggcg aaggactcct caccctcgag cgccacgagc gccgggcgca gctcctcgcg
     1621 ggcggcgcgc cagcgcgccg acaccgacgc gacggcctcc gttacgtctc gtacctcgcg
     1681 cacgtcgaag ccgctctggg ccaggagccg ctcgttgccg ccgaccgggg tatagaggaa
     1741 aaagccgatc gagctgcggg cctgaatctc ctcgttcgtg agctgaccgg tgaccacgat
     1801 ggggtccgtg aagagcacgc ggccgccggg ccgaagcacg cgatgccagt cgcgcaggac
     1861 ctcgaggcgg cccggaaagt gattgatcga gtcgttgcag aagacggcgt cgaacgactg
     1921 gtcggggaag ggaagacgcc gcgaggcgtc cgtcctctcg aaggagacgc tggaggagag
     1981 cccctgctcc gccgccctgg cgcgcgccgc ctcgattccg tgggaattga gatccacgcc
     2041 gacgcaggtc gcgccggtct ccagcgccat gcggcaggtc acgccgcccg agccgcaggc
     2101 cagctcgagc gcggtccgcc ccgggcccag accgagcagg ccgaagaacg ccgtcgcctc
     2161 ggcggcggtg agccagctgg cctggccgag atcctcgtcg taggtccgcc gccgcaccgc
     2221 cacctgggga tcggccgtca ggtgaccgta gtgcgcgtca tacaacggca cttccttcgg
     2281 catctgccgc tcctcgctga cgaaataggc ggtatgggag aggtccacga agttggcctc
     2341 gtcggccgtg gacgccgccc attccggcga ccgtcgggcc tcgagcaggg ccgggacgtc
     2401 gtcgaaccag agctcggcca tgccgtcgaa gtcggcgggt cggctgtccg ccgcgattgt
     2461 taccgcgtag ctgtggacca gcttgcggag gccggggatc cgcacgccga tcggcgcgtg
     2521 gacctcggcc cagtggcgga agaactcggc ctgggtcagc ccgggcttcc gacggataca
     2581 gtacacgagc ttcaccatgg tgcgcctccg gacagctgat ccgtcaccct tcgcgtcgct
     2641 gggtcatccc ggaaacgagc cttccgccgc aggctcctgc agttctccag aatgaagggt
     2701 atccgtgacg ccgatcaagg tcgggccctg gcggctcccg ctcgccgccc tcctgttcct
     2761 cccgccggcc tgctcgcccg ccacctcggc ggagccggag gccggtcact cggtgctctt
     2821 cgtggggaac agcctgacgt acaccaacga tctccccgcc atggtggagc agctggcgga
     2881 ggcggcgggc gattccattc gcgtcgggat ggccgcgggc ccgaacatgg cggtcatcga
     2941 ccacaccatc ggggcgacgg aagcgatcgc gcagatccgg cagggtgact ggtcgttcgt
     3001 cgtcctgcag cagggaccca cgcccgcggg catctgtcgg gacacgctga tcatcgccgc
     3061 catgcgtctg gcgccgagga tccgcgacgc cggcggccgg ccggtgctgt tctggccgtg
     3121 gacccgacaa gccttcccgc agacgctgga agccgccggc gaatcggcga cggcggcggc
     3181 gcgggcggtc ggcggcatgg tggcgccggt gggcacggct tggagggagg cgctcgacgc
     3241 ggaccgcgac ctcccgctct acggctccga cggctaccac ccggcgccgg cgggtaccct
     3301 gctcgcggcg ctgaccctgt atgaccgtct gttcggccgg gatgtccgga gcatcgcggc
     3361 cttggacctc gcggccatcg ccggggtgcc gatcggccca ggccggctcg aggccatggc
     3421 agccgcggcg cacgcggcca gcgccgagct ggcccctgac cccagggtgc cggcgccgcc
     3481 ggataccacc agggtgtcct caaccggcgg gccgtgctag ctcggcggcg tcgagcggcg
     3541 cagccgggtc agtgtgcggt cgagggccgc cgcgaaggcc tgtttcgccc gggcatcgta
     3601 gggtgagggc ccgccggtca cgactcccgc gatgcgcgcc tgctccatga agtcccgcac
     3661 cgagagccgc tcgccgatgg tctccatcgt gtgctcctcc ccccggggat cgagcacggc
     3721 gatccgccgg ggcacgagca acgcggcgag cgggacgtcc tgggtgatga cgaggtcgcc
     3781 gggagtcgcg tgatcggcga tgtaccgatc ggcgacatcg gctccgccgt ccacccggac
     3841 cgcacgcacc agcgggttgc ccgccggcgg ctgcaggcgc tggttcgcga ccagcacggt
     3901 ctccagcgtc agccgcctcg cggcgcggaa gaccagctcc ttgacgtccc tgggcgccgc
     3961 atcggcgtcg atccagatct tcagttcgac cccactccct tgtcggtacg gctggagacg
     4021 gcgctcacgg ccgcgccgcc cggcagggcg cggcgctcga tctcccacgc gtgggctatg
     4081 gcgtgccagg cgagccgacg cgcgaagtaa ggggcgggcc accgcttccc cccgcgggga
     4141 ccggtttccg gtatttctcc accgagggac gcccgcaagc cctcgatgac cgcattccgg
     4201 atgtcgccca cgggatccgc gctcttgcct ggcggagcgg tcttccaccc cagtgccgac
     4261 aggtatccgc gctcggcctc cgcgacatgc ctgacgatcg cgtcgaggtc gcggccgccc
     4321 ccgcgagggc ccttgcggag cggtttcccg gcggcccgct tccgcgcggc gtcgagcgcc
     4381 cgccaccccg cccgcagcag cttctcgagc cgcgcgccgt cgccggcgcc ggcccgctcg
     4441 cggtcggccg aggggatcgc gccgggcacg ccgaagtccg tggtcgcgtt gcccgccagg
     4501 cgctcgacca cgcgaagctg ctcgagccgc gacggggcgg cgaagccgag ccgggccggg
     4561 cggaccaccg cagcataagc gggaccgcag tccagcagag cctggagtgc cgtggcctca
     4621 tccgctccgc tccgacacca gccgggccag tgcacggcac acgcgaagac gcgcttcccg
     4681 ccgacttcga ggtagacgtc gactcgtccg gccgcacggg tcatgcgacg cttccatcca
     4741 tgccgctaca gcccggccgt gccggcgctg aaatcctccc acgtccggga atcgacgtgt
     4801 tgatactccc gccaatggga cacccggtca cccgccaggc gaatcagggc cacgccgtgg
     4861 tagcgcctgg tgccgtcgta ggtgtattcg gccacgccgc gctggtgcac ctcgtcgaag
     4921 agacgggtgt gccacaccgt tcgctgggga tagccgtcgt ccgcttcgaa gaaggccagc
     4981 agcgccgctc gactcgtgaa ggcataccgc agggggtcgg cgtaccgcac gtccgccgtg
     5041 aaccacccgg ccgcggcggt gtaatcccgt cgcgcccagg cgccggcgag gtcatcgagc
     5101 atctcgacga actccccctg cgtcataggc ctccctcgta tcagcgcctc acggtcaggc
     5161 cggatctacg tcgcgtccca tcatcagaca atcgttgaac tctccgtcga tgagcgtgtc
     5221 ccgcgtggtc cgaccctcgg gcacccagcc catctgctcg tagagcctga tcgccgccgt
     5281 gttgtccacc cgcaccttca ggttgatctt ccgcaccacc ccgcccgtct cggcccaccg
     5341 gatcatgtac tccatcaggg ccttgccgat cccctggccg gtgtacgcct ggagcacgct
     5401 gatcccgaac tcgccgacgt gccgcatccg ggggcggcgg ccaccgtcga aggtcagcgc
     5461 cccgacgatc tcgccgccca ggaccgcgac gatcgcgagg gcgttgtccg aggccgccac
     5521 ccgcgtcagg tactcgcgct cctcctcgac gccgatcccg ggtccctcgg cgccgaaggt
     5581 gagattcacc gtctcgccgc cgacccggca caggtaggcg agcacggccg cggcctcgtc
     5641 gggctccgtc cggcggatcc gcacggtccg tccgtcgcgc agcaccagcg tccggtcggc
     5701 gctcacgccc gcggtcaccc gcggtcctcg agctgggccg ccagtttctt cggggccacc
     5761 agccggtacg agtcccgcat cagttccctt acctccgacc aatccggcct ccgatcgagc
     5821 cacacgccca cccagccgct cgggcccacg tacggcggca cgaagaagcg atccggctcc
     5881 gcgcgcacca tcagcgcctg gttgcccggc gccgccttgc accagacagc gggacgcccg
     5941 ccgccatggt gattgttgga cgccgcgtac atggcgaaca gcttgttgcg caccctgaac
     6001 gtgggctcgc cccaggcctc gacctcgtgg gcttccggaa gggcgaggca gaccttgcgc
     6061 agtctggcga ggggcgtcgg cggcatggga cgaggatgct cgagcgcttc agctcactcc
     6121 gcgggcaacg cgccgacgcc gcgcgccatg gccgacgccg ccagcaccat cagcagcacc
     6181 agcgccgcct gcaggtagct gatgcgggcg tagcgtccgg cgaccgcggt gtcgggcgac
     6241 tctccccggg ccacctgcac ccgccagcgg atgaacgtca gcatgggagg tatctccagc
     6301 accaggatcg cgagcaggag ggtcatcttg ccccagaaca cgtggttctg gagatagtag
     6361 tccatcccct tctccaggcc gccgatcacg cgcaccagcc cggtgccgat ccagatcgcg
     6421 gcggcgacgc cccaccatcc gtcggcgtag aagacgcggc gcagccccgc cgtgtcgagc
     6481 ggtccgcgga gcgcgcgcgc ccgggcccat accgcgccca gtccgatgcc caggcccagg
     6541 aggtgcagcc atgcgaagag ccaccgaacc agcacgttgc ctcccgggtg actcgggtca
     6601 cgccctctcg aggccacccg gcctacgttg cccaggtggc ctcgggaggg acctacaacg
     6661 gtgaggtact atacatgaaa cggaacccga tggcgctggc cgtcacgctg gccctgatgc
     6721 tcgcgtgtgg agagcgcacg agcgagcggg acgccggcac ggcgcgcgcc ggcgtcgaag
     6781 acaccactgc ggctccgtcc accgatctgg gggtcccctc gagagacacc gcggccgaca
     6841 cgggcagcgc taccgacacc ggcggccgcc cgcggtgagg ccgggggttc ctcagggctg
     6901 catcctcccc atgtcttcca gcagtgcggc gggtgtgacc ggcccgccga ggaactcctc
     6961 gatcacctcg cgggtgggtc gctcgagacc gaagcggaag agcgcgctcg agatccactc
     7021 gtaccacccg gggtcgccca gcatccagga gccctccagc tcgaccgccc gggcgcgcag
     7081 cgccgcgatg aggatcgcgc ccaccgcgta gttcatcatg tagcccggcg agtccaccag
     7141 ctgcccccgc atcgcccacc aggagagctc ggggtggggc cggatgcgga ggtactccga
     7201 cgtgagccgg gtccagacct ggttgggatc ggccgaaggc tcgcgcagca tccggagctc
     7261 gaagagcgac caggcgacgt cgagcacgat gctgccgtag cgggagcgca gcccgtcgcg
     7321 gagggggacc gagtcgccca gccagcgctg ctgccattcc ggctccgcca cgtcgagtgc
     7381 gacgaaatcc gccacggcct cggtgaacgg gtcgctgtcg ggccagtcgg cgaacgcggg
     7441 acgggtccgg atcgccgcga tgtggatcgc gtggccggtc tcgtgcagca gctcggtgag
     7501 gttgtcgagg ccgccggtgc ggtaggtggc gaagaccgac ggctcgcccg gtgtccagcg
     7561 cccgcccacc tgccgcggcc gcgcgccgaa ggtacagaag gcgaccggtg tcttgccctc
     7621 gcgcggctcc agatcgtagc gcacgttgag cgcgcccacg tccgccccca ccgcgcggta
     7681 gatggccgcg ttgagcgcgg tgatccgctc gcgggtgacc cgcgcaccga gcgtccgggc
     7741 cgggcgcccg gcgagatggt accagtccca gggctcgatc accgagtcgg gcgccgccgc
     7801 gcgcc
//
LOCUS       DASUYN010000597         2020 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_628910, whole genome shotgun sequence.
ACCESSION   DASUYN010000597 DASUYN010000000
VERSION     DASUYN010000597.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2020
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_628910"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(242..1666)
                     /locus_tag="VF061_11705"
     CDS             complement(242..1666)
                     /locus_tag="VF061_11705"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX6670221.1"
                     /translation="MAHLSELTATEATRRIRAGRVTPTALLDACVARIDACDPEIRAW
                     VHLDREEAFRAAQEREREVGLGRSAGALHGIPVALKDIIDVSGLPTTAGAGPFAHRTP
                     STDATVVARLRAQGAVVLGKVTTTAFAYLDPIPTRNPWNLAHTPGGSSSGPAAAVAAR
                     MVPLALGTQTVGSVLRPAAYCGVVGFKPSYGRISTAGVVPLAWSLDHLGIFSRSVEDA
                     ALALEVMAGADAADPRSSAAPVDAYLAGLMNPPAPRLGFLRPLLERTSPDMAAHLESA
                     VQTFQAHGAQIVDVTLPPSFGHDVGARSTNAAPQAAMPRDAHAPAFSGIHDVGRTVLE
                     AEAAAAHHALFAAHADAYPPKIRQALERGREIPAMAFLLAQEARHRFRAEATAIAVRF
                     DALLTPTVGAPAPKGLESTGDPYFCAPWSSAGMPAMALPSGLAGDGLPLSVQLVGAPF
                     AEARLLAAAAWCERVLGFDRQPAI"
BASE COUNT          330 a          679 c          710 g          301 t
ORIGIN      
        1 ccgttcggcc gttcggttcg acactgctcc gcgcttggcg gcgcgaacat ctcgggcggg
       61 tcgtgctatg aaacgagcct cccaaaacac cctccagttg aagtttcctc cgccggtggt
      121 gcctcgccga ggcacgagca aggtatgggc accggagagg acatcgaggg cccatcgatt
      181 cgcgcgggaa cgcgttcatt ccgctctgcc aacgtccgag gcatcggcga cttctgggcg
      241 ctcagatcgc gggctggcgg tcgaagccga gaacccgctc gcaccacgcc gcggccgcca
      301 ggagccgggc ctcagcaaac ggcgcaccca cgagctggac cgagagcgga aggccgtcgc
      361 cggccagacc gctgggcagg gccatggcgg gcatgccggc cgaactccac ggtgcgcaaa
      421 agtacggatc gccggtggac tccaatccct tgggcgctgg cgcaccgacc gtcggcgtga
      481 gcagcgcgtc gaagcgcacg gcgattgccg tggcctccgc gcggaagcgg tgtcgggcct
      541 cctgggccag caagaacgcc atggccggaa tctcccgccc cctctccagg gcctggcgaa
      601 tcttcggtgg gtaggcatcc gcatgggcgg cgaacagcgc gtggtgcgcg gcggcggcct
      661 cggcctccag cacggtgcgc ccaacgtcat gaattcccga gaaggccggc gcgtgtgcgt
      721 cccggggcat tgccgcttgc ggggcggcat tcgtcgagcg tgctccgacg tcatggccga
      781 acgagggcgg cagggtgaca tccacgatct gggccccgtg tgcctggaac gtctgcaccg
      841 ccgactcgag gtgcgcggcc atgtccgggg aggtgcgctc caagagcgga cgcaggaagc
      901 cgaggcgagg ggcgggcgga ttcatgagac ccgccaagta ggcgtcaacg ggcgccgcgc
      961 tcgaacgcgg atcggcggca tcggcaccgg ccatcacttc gagcgcgagc gcggcatcct
     1021 ccacgctgcg actgaagatg ccgagatggt cgaggctcca ggccagtggc accacaccag
     1081 ccgtgctgat gcggccgtag ctcggcttga acccgaccac gccgcagtag gcggccgggc
     1141 gcaacactga gccgaccgtc tgcgtgccca gagccagcgg caccatgcgc gcggcgacgg
     1201 cggcggctgg accactcgag gagccacccg gcgtgtgagc gaggttccag gggttgcggg
     1261 tcgggatggg atcaaggtag gcgaacgcgg tggtggtcac cttgcccagg accaccgcac
     1321 cctgcgctcg caagcgggcg accacggttg catcagtcga cggcgtccgg tgcgcaaacg
     1381 gtccggcgcc ggcggtggta ggtagtcccg agacgtcaat gatgtccttc agggcgacgg
     1441 gaatcccgtg tagggcaccg gcactccgtc caagaccgac ctcccgctcg cgttcctgcg
     1501 cggcgcggaa cgcctcctcg cggtccaggt ggacccaggc tcgaatctcg gggtcgcagg
     1561 cgtcaatgcg agccacgcag gcgtccagca atgccgttgg cgtcactcgg ccggcgcgga
     1621 tccgccgggt cgcctcggtg gcggtcaact cggacaagtg ggccatgacg cgctcctctg
     1681 tcctaggcag ccaaggtccc gcgccagggg atggctgctg gaccccgtcg atcctacgct
     1741 cgattggcgt gatgtcaacc acgcgagctc aggtgtgatg tctgaggaat tgggagcatg
     1801 agcatggtga tgcggaggtg atagcggtgc tcgtcccttc tcaccgttca catccgcgcg
     1861 cgaggatacc gtaacagtgg cgttgttcat ggtgtcctcg ccaagcaggt ctcaccccca
     1921 cccccgcccc tcgcacgcgt gaggctcaga ggtcaaagcc ctgagggcga ggtgatggtc
     1981 gcggtatccc ctccctatct cctccatgac cccagcggat
//
LOCUS       DASUYN010000598         4122 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_187697, whole genome shotgun sequence.
ACCESSION   DASUYN010000598 DASUYN010000000
VERSION     DASUYN010000598.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4122)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4122)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4122
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187697"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..418
                     /locus_tag="VF061_11710"
     CDS             <1..418
                     /locus_tag="VF061_11710"
                     /inference="COORDINATES: protein motif:HMM:NF013781.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HEX6670222.1"
                     /translation="EGLFAEIEAQGGVVPAIEHGWFQRQIARSSMRFQSDVEQERKTV
                     VGVNRFVEEAEPPFEILKVGDEAERTQRARLARLRERRDAALVTERLGALRRAAADDR
                     NIIPAMLDCARAYCTLYEIRHVLEEIYGNYREPVFF"
     gene            387..1583
                     /locus_tag="VF061_11715"
     CDS             387..1583
                     /locus_tag="VF061_11715"
                     /inference="COORDINATES: protein motif:HMM:NF037429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670223.1"
                     /translation="MATIASRFSSDRARGDGATERARLQRLAAVDAGRHRVVTCYQKL
                     EPRDRSRGKYLIKLKNRVREVVQALPRLGLDRNAQEEVTHDLDRIQTHLRSPGNLPPT
                     QGVALFACEPIGLFEAVPLPFVYRSRLAVDTAPLVRELASVEDEFGRILTVVLDRTAA
                     RFFEVTAYQAVELPGLRSDSTRGKRFHSDNDGSSGWGEHTYNNRIRTEKQRHYEAIAR
                     ELFAIDRRRPVHGIVLGGTGSDALAVEPFLHNYLVERVIGTAKINPKEATPARVHEAT
                     LAVREAWERDAERNLVREVQEALGSGWSVNGMTPTLRALSRGQVRALLVHADAGEPGF
                     RCSESGRLALSERDCRGEGDPIPVLDVVDDAIEDALRQGVDVNVVYEPEARNAIEGLA
                     GLLRFR"
     gene            1610..2302
                     /locus_tag="VF061_11720"
     CDS             1610..2302
                     /locus_tag="VF061_11720"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HEX6670224.1"
                     /translation="MKAVLFDAGNTLIYLDHERMATEVGAALGLPISAAALDASVGAA
                     TRAVEGAAGVALGRSDRDRARVYLEALFTGAGVPSARMDEVARTLQRLHQDWHLWCRT
                     LPGTTEALDRLRRAGLRLGVVSNSDGRVEEALAAAGIRDRFDVVLDSALVGVEKPDPA
                     IFRAALAALGVGPEQALYVGDLYDVDVVGARAAGMEAMLLVPDAAAAGPDCRRIESLV
                     ALADDLLNGGRS"
     gene            2305..2733
                     /locus_tag="VF061_11725"
     CDS             2305..2733
                     /locus_tag="VF061_11725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin B12-binding domain-containing protein"
                     /protein_id="HEX6670225.1"
                     /translation="MPATQPSLPRPIRVLVAKPGLDGHDRGAKVVAAALRDAGMEVVY
                     TGLHQTPEMIATAAVQEDVDVVGLSILSGAHMTLFPRVRRLLDEAGRPDVLVTGGGII
                     PADDMAALQQQGIGRLFGPGTPTADLVEYIGAWAAEHLES"
     gene            2743..>4122
                     /locus_tag="VF061_11730"
     CDS             2743..>4122
                     /locus_tag="VF061_11730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HEX6670226.1"
                     /translation="MSASAPSKQSRLRQLSEEYRRLAARLREGGGAERVARMHQQGKL
                     APRERVEGLLDRGAPWLELGLLVAHDQYDGQAPGAGVVTGVGVIEGREAVVVANDATV
                     KAGSWWPETIRKILRAQEVAMRQRIPIVYLVDSAGVNLPYQGGVFPGQYGAARIFYYN
                     SIMRRYLHVPQISAVMGSCVAGGAYLPALSDVIFMVEGTSFMGLGGPNLVKGATGQSI
                     DAESLGGARTHTELSAVAHYRAADDRACLERIREYLGRLPRVEGVSHRVVPERPPARP
                     VTDLYDILPHDHRLSYDMRHVLACLLDGGTLDEFQPEVAKEMICGHAHIGGRPAAVIA
                     NQRGVIKGQPGERPRFGGILYTGSAEKVAYFIETASRERLPLLFVQDVSGFMVGPEAE
                     QSGIIRAGAHFVEAMATAVVPKLVLTVNHASGAGYYAMAGQGFDPDFILSWPTGRMGV
                     MEGESAVMAV"
BASE COUNT          577 a         1419 c         1553 g          573 t
ORIGIN      
        1 cgagggactc ttcgccgaga tcgaggcgca ggggggtgtg gtgcccgcga tcgagcacgg
       61 ctggttccag cgccagatcg cacgctcctc gatgcggttc cagagcgacg tggagcagga
      121 gcgcaagacc gtggtcggcg tgaaccgctt cgtggaggag gcggagccgc cattcgagat
      181 cctgaaggtg ggcgacgagg cggagcggac ccagcgcgcg cgactggcgc ggctccggga
      241 gcgccgtgac gccgcgctgg tcaccgagcg gctgggggcg ctgcggcgcg ccgcggccga
      301 cgatcgcaac atcatcccgg cgatgctgga ctgtgcccgt gcttactgca cgctgtacga
      361 gatccggcac gtcctggagg agatctatgg caactatcgc gagccggttt tcttctgacc
      421 gggcgcgggg cgacggcgcc accgagcggg cgcggctgca gcgactcgcc gcggtggacg
      481 cgggccgaca ccgggtggtc acctgctatc agaagctgga gccccgggac cggagccgcg
      541 gcaagtatct gatcaagctg aagaaccggg tcagggaagt ggtgcaggcc ctgccgcgcc
      601 tgggtctcga ccggaacgcg caggaggagg tgacccacga cctggaccgg atccagaccc
      661 atctccggag cccgggcaac ctcccgccca cccagggcgt cgccctcttc gcctgcgagc
      721 cgatcgggct gttcgaggcg gtgccgctgc ccttcgtcta ccgctcgcgc ctcgcggtgg
      781 acaccgcgcc gctggtccgg gagctggcct cggtggagga cgagttcggg cggatcctca
      841 cggtcgtgct cgaccgcacc gccgcgcggt tcttcgaggt caccgcctac caggcggtgg
      901 agctgccggg cctccgctcc gacagtaccc ggggcaagcg ctttcacagc gacaacgacg
      961 gctcgtccgg ctggggcgag cacacctaca acaaccggat ccgcaccgag aagcagcggc
     1021 attacgaggc catcgcccgc gagctgttcg cgatcgaccg acggcgtccg gtacacggca
     1081 tcgtcctggg cggaaccggc agcgacgcgc tcgccgtgga gccgttcctg cacaactacc
     1141 tggtcgagcg ggtcatcggc accgcgaaga tcaatcccaa ggaggccacg ccggcccggg
     1201 tgcacgaggc gaccctcgcg gtgcgcgagg cctgggagcg cgacgccgag cggaacctcg
     1261 tgcgcgaggt gcaggaggcg ctgggcagcg gctggtcggt gaacgggatg acgcccaccc
     1321 tgcgggccct gtcgcgaggg caggtgcgcg cgctgctggt gcacgcggac gcgggcgagc
     1381 ccgggttccg ctgctccgag agcggacggc tcgctctctc cgagcgcgac tgccgcgggg
     1441 agggcgaccc gatcccggtg ctggacgtgg tggacgatgc catcgaggac gcgctccgcc
     1501 agggcgtcga cgtcaacgtg gtgtacgagc ccgaggcgcg taacgcgatc gaggggctcg
     1561 ccggcctgct gcgcttccgc tgagcgctcc cttccgtacg ccggcgtcgc tgaaggcggt
     1621 cctcttcgac gccggcaaca cgctcatcta cctcgatcac gagcggatgg cgaccgaggt
     1681 cggcgcggcg ctcggcctgc cgatcagcgc cgccgccctc gacgcctcgg tcggggccgc
     1741 gacccgggcg gtcgaaggcg ccgccggtgt cgccctgggg cggagcgacc gcgatcgcgc
     1801 ccgggtctac ctggaggccc tcttcaccgg ggccggggtg ccgtccgcac ggatggatga
     1861 agtcgcccgg accctgcaac gccttcacca ggattggcac ctctggtgcc gcaccctgcc
     1921 cggcacgacg gaggcgctgg atcgcctccg tcgcgccggg ctccggctgg gcgtggtgtc
     1981 gaacagcgac ggccgggtgg aggaggcgct cgccgccgcc gggatccggg accgtttcga
     2041 cgtggtgctc gattccgcgc tggtgggtgt ggagaagccg gatcccgcta tcttccgtgc
     2101 cgcgctggcc gctctcgggg tcggcccgga gcaggcactc tacgtgggcg atctgtacga
     2161 cgtggacgtg gtcggcgcgc gggcggccgg gatggaggcg atgctgctcg tgcccgacgc
     2221 cgccgcggcc ggacccgact gccggcggat cgagtccctg gtggcgctgg ccgacgacct
     2281 gctgaacgga ggacgctcct gacgatgccc gccacccagc cgtcgcttcc caggcccatc
     2341 cgcgtgctgg tcgcgaagcc cggtctcgac gggcacgacc gcggggccaa ggtcgtggcc
     2401 gccgccctcc gcgacgcggg catggaggtg gtctacaccg ggctgcacca gacgccggag
     2461 atgatcgcga ccgcggcggt ccaggaggat gtggacgtgg tcggcctctc catcctctcg
     2521 ggcgcgcaca tgacgctctt tccccgggtg cgccggctgc tcgacgaggc gggccggccc
     2581 gacgtcctgg tcaccggagg cggcatcatc ccggccgacg acatggccgc gctccagcag
     2641 caggggatcg gccggctgtt cgggccgggg acacccaccg ccgacctggt cgagtacatc
     2701 ggggcgtggg cggccgagca cctcgagtcc tgaggccatc gcatgtccgc gtcagccccg
     2761 tcgaagcaga gccggctccg ccagctgagc gaggagtacc gccgccttgc ggcacggctc
     2821 cgcgagggcg gtggcgcgga gcgggtcgcc cggatgcacc agcagggcaa gctggcgccg
     2881 cgggagcggg tggagggcct gctcgatcgt ggtgcgccgt ggctggagct cgggctgctc
     2941 gtcgcccacg accagtacga cggccaggca cccggggccg gcgtcgtcac cggcgtgggc
     3001 gtgatcgagg gccgggaggc ggtggtggtg gcgaacgacg ccaccgtgaa ggccggctcg
     3061 tggtggcccg agacgatccg caagatcctg cgcgcgcagg aagtggccat gcgccagcgc
     3121 atcccgatcg tctacctggt ggacagcgcc ggcgtgaatc ttccctacca gggcggggtc
     3181 tttcccggcc agtacggcgc ggcccggatc ttctactaca actcgatcat gcggcggtat
     3241 ctccacgtgc cgcagatcag cgcggtcatg ggaagctgcg tggcgggcgg cgcgtacctg
     3301 ccggcgctgt ccgacgtgat cttcatggtc gagggcacca gcttcatggg actcggcggg
     3361 ccgaacctgg tgaagggcgc caccgggcag tccatcgacg cggaatcgct gggcggcgcg
     3421 cgcacccaca ccgagctgag cgcggtcgcc cattaccggg cggcggacga ccgggcgtgc
     3481 ctcgaacgga tccgcgagta cctcggccgg ctgccgcggg tggagggcgt gagccaccgc
     3541 gtcgtccccg agcggccgcc ggcgcgcccc gtcaccgatc tctacgacat cctcccgcac
     3601 gatcaccgcc tctcctacga catgcgccac gtgctcgcct gtctcctcga cggcggcacc
     3661 ctggacgagt tccagcccga ggtggcgaag gagatgatct gcggccacgc ccacatcggc
     3721 gggcggccgg cggcggtcat cgccaaccag cggggggtga tcaaggggca gccgggcgag
     3781 cggccgcgct tcggcggcat cctctacacc ggcagcgcgg agaaggtggc ctacttcatc
     3841 gagaccgcga gccgggagcg gctgccgctc ctgttcgtgc aggacgtgag cggattcatg
     3901 gtggggccgg aggcggagca gtcgggcatc atccgggccg gggcccactt cgtcgaggcg
     3961 atggcgaccg cggtggtgcc gaagctggtg ttgacggtca accacgcctc cggcgcgggc
     4021 tactacgcca tggcggggca ggggttcgat cccgatttca tcctctcctg gccgacgggc
     4081 cgcatggggg tgatggaagg cgagtccgcg gtgatggcgg tg
//
LOCUS       DASUYN010000599         2168 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1071568, whole genome shotgun sequence.
ACCESSION   DASUYN010000599 DASUYN010000000
VERSION     DASUYN010000599.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2168)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2168)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2168
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1071568"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..216)
                     /locus_tag="VF061_11735"
     CDS             complement(<1..216)
                     /locus_tag="VF061_11735"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthetase"
                     /protein_id="HEX6670227.1"
                     /translation="MFDGRTTCLVVVGAQWGDEGKGKLVDVLAERADLVVRYQGGANA
                     GHTVVIGDTQFVLRQIPSGILHAGVVCV"
     gene            complement(298..1371)
                     /locus_tag="VF061_11740"
     CDS             complement(298..1371)
                     /locus_tag="VF061_11740"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HEX6670228.1"
                     /translation="MTPLHETARRLLAQHREAGTAEAEAARAIVTDHLTRLGYRVSRQ
                     HFRFHPSALLGLPILGAGVGAAALMALPLLVLPGVAGWGALAVWSLILGSSACLAGGV
                     AAGWLTLGEAREDANLVAVRGEAAPRRWIVAHLDTKAQAQSMAGRLVAVWVLLAALAC
                     GAGLAVARLLAPVPLWAAGIGAALAVLAGALAGRGRLRGTSRGARDNGSGVVAALAFA
                     EDSADEETGVLITGAEEFGLVGARMFARIQGSLAGVAVINLDTIDGVGPLFVVRHDAA
                     AIAAAGSVAARLESLSLPVRSRRLPLGILVDSLPLARAGAAAVTIGRLTWSTLRVIHT
                     PADVPETLSLEVAERVGRALAAN"
     gene            complement(1383..>2168)
                     /locus_tag="VF061_11745"
     CDS             complement(1383..>2168)
                     /locus_tag="VF061_11745"
                     /inference="COORDINATES: protein motif:HMM:NF012652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HEX6670229.1"
                     /translation="FTVPTIESLRLPEVVQQISESDRGLLLVTGVSGSGKSSTVAAMV
                     HHVNRTQHKHVVTIENPIEFLHRDLSCSITQREVGVDTESIVVGLRAALRQDPDVVVL
                     GEMADAETIDTAIKAAETGHLVIATMPTADVVATIERVIAALPAEEREVGRMRFAEAL
                     RAIVSQQLLPEKSQKARVPAVEVMVMTPAIRDLIRDAGRTADVLKLMADGRKELGSQT
                     YREHLQELVEAGLISPDTAKAAHALTKPATPSGRRGAKQAAAG"
BASE COUNT          314 a          813 c          754 g          287 t
ORIGIN      
        1 cacgcagacg actccggcgt ggagaatacc ggaggggatc tgtcggagga cgaattgggt
       61 gtcgccgatg acgacggtgt gcccggcatt ggcgccgccc tggtagcgca ccaccaggtc
      121 ggcccgctcg gcgagcacgt ccaccagctt gcccttgccc tcgtcgcccc actgggcccc
      181 gacgactacc agacaggtcg tcctgccgtc gaacatgtgc cccccacagg ccaacgaaaa
      241 gagcccctcg cggggccctg aatcctcggg caaacgtatg cgcgcccgcg cgaaaggtca
      301 attcgccgcg agcgcgcgtc ccacccgctc ggcgacctcg agcgagagcg tctccggcac
      361 gtcggccggc gtgtggatca cccgcagcgt gctccaggtg agccgtccga tcgtgaccgc
      421 ggcggcaccg gcacgggcca ggggaaggct gtccaccagg atgcccagcg ggagccggcg
      481 gctccgaacg gggagcgaca gggactcgag cctggccgcc acgctcccgg cggcggcgat
      541 ggcggcggcg tcgtggcgga ccacgaacag cgggcccacc ccgtcgatgg tgtcgagatt
      601 gatcaccgcc acgccggcca ggctcccctg gatccgggcg aacatcctgg cccccaccag
      661 tccgaattcc tccgcgcccg tgatcagcac gccggtttcc tcatccgccg agtcttcggc
      721 gaaggcgagc gcggctacga cgccgctgcc gttgtcccgg gcaccccggg acgtgccccg
      781 gagccgccca cggccggcga gcgccccggc gagcaccgcg agcgccgcgc cgattccggc
      841 cgcccagagc ggcaccggcg ccaggaggcg cgcgaccgcg agtccggcac cgcacgccag
      901 cgcagccagc agcacccaca ccgcgaccag ccgcccggcc atggactggg cctgcgcctt
      961 ggtgtcgagg tgcgccacga tccagcgccg cggcgccgcc tccccccgta ccgcgacgag
     1021 attggcgtcc tcccgggcct cgcccagagt gagccacccg gccgccacgc cgcccgcgag
     1081 gcaggcgctg gacccgagga tgagactcca gaccgcgagc gcaccccacc ccgcgacgcc
     1141 cggcagcacc agcagcggca gcgccatgag cgcggccgcg cccaccccgg cccccaggat
     1201 cgggagcccg agcaatgcgg aaggatggaa tcggaagtgt tgtcgggaga cgcggtagcc
     1261 caggcgggtg agatggtcgg tgacgatggc ccgcgccgcc tcggcctcgg cggtgcccgc
     1321 ctcccggtgt tgggccagga gccgccgggc ggtctcgtga agcggggtca ccgcacgctg
     1381 ggtcagcccg cggcagcctg cttggcgcct cgcctgcccg agggtgtggc gggcttggtg
     1441 agcgcgtgag ccgccttggc cgtgtcgggc gagatgaggc cggcctccac cagctcctgc
     1501 aggtgctccc ggtaggtctg gctgcccagc tccttccggc cgtcagccat cagcttcagg
     1561 acgtcggcgg tccgccccgc gtcgcggatg agatcgcgga tagcgggcgt catcaccatc
     1621 acctcgaccg ccggtacccg ggccttctgg ctcttctccg ggagcagctg ctgggagacg
     1681 atcgccctga gcgcctcggc gaagcgcatc cggccgactt cccgctcctc ggccggcagg
     1741 gcggcgatca cccgctcgat ggtcgcgacc acgtcggccg taggcatggt cgcgatcacg
     1801 aggtgccccg tttcggcggc cttgatcgcc gtgtcgatcg tctccgcatc cgccatctca
     1861 ccgaggacca ccacatcggg atcctgccgc agcgcggcgc ggaggccgac cacgatgctc
     1921 tcggtgtcca ctcccacctc acgctgggtg atggagcagc tcaggtcgcg gtggagaaac
     1981 tcgatcgggt tctcgatggt gaccacgtgc ttgtgctggg tgcggttcac gtggtggacc
     2041 atggcggcca cggtggagct cttcccgctg ccgctcacgc cggtgaccag cagcaggccg
     2101 cggtcggact cggaaatctg ctggaccacc tccggcagcc ggagggattc gatggtcggc
     2161 accgtgaa
//
LOCUS       DASUYN010000600         3666 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1513679, whole genome shotgun sequence.
ACCESSION   DASUYN010000600 DASUYN010000000
VERSION     DASUYN010000600.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3666)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3666)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3666
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1513679"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            258..1481
                     /locus_tag="VF061_11750"
     CDS             258..1481
                     /locus_tag="VF061_11750"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEX6670230.1"
                     /translation="MPLRLGQMYRAVEAANPRIAAAGALARAADARIAPARRPPDPQL
                     QFALMNRSLPGFGLADPLGMNQVQLMQMVPFPGKLRMAGQVASARAEAERVRALDVSW
                     DARARAAMAFYELYQIDHSLQVAEGTVRILQDLAVTAGTMYGVGEARQPDVLRAQVEI
                     ARMSEDIIRMRTERVSAGARLNALLLLDPSAPVGSPVQPAFPDTLPPLDSLIAEAERN
                     RPMVQAGEAEVRAAEAGIRLARREIWPDLQVGVQYGQRPMDGGTDRMVSLMLGVNLPI
                     FAGSRQLAMRREALAMRQMAEADLAAMQADTRGRVAELYAAAERARRLGELYQGTILP
                     QTQTTVSAALASYRVGGVDFMTLLDNQMTVNRYRQDLYALHAQRGQALAELEMLLSRP
                     LFNPDDTVLASGGRQ"
     gene            1478..2791
                     /locus_tag="VF061_11755"
     CDS             1478..2791
                     /locus_tag="VF061_11755"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX6670231.1"
                     /translation="MKTSSTVPTQETEAQPFGPLVPLGRRRLRLAVLALALGAAGGVA
                     FWATRASVPADEAAGHAHGAAPGGSEAMPVTLAPRDQGRIGVTFAPVVRAPLGLSVRT
                     VAQVSYDETRVKTVAPLIEGWVDQLFVNFTGQAVRTGEPLFTIYSPMVVTAQQELLLA
                     RRLVGDLSGGTPEARQSARDLLESSRRRLQYWGVPQEEIERVEETGEVRRTVTLRSPY
                     GGVVVDKPVLAGQRIMPGDVAYKIADLSRVWVEGEVFERDLPAVRIGLRVTAEFAALP
                     GIVREGRLTYVYPTVNPETRTARIRVTLANPGSVLKPGMYATIRFSAPTDSVYSVPRS
                     AVLATGERDFVFVRARDGRFVPTLVTLGAATDDRVEILRGLSVGDTVVASGTFLVDAE
                     SNLGSLMGGMGNMPGMDVTAPAGSAATPGAQGGDAGPHTVHPAEE"
     gene            2796..>3666
                     /locus_tag="VF061_11760"
     CDS             2796..>3666
                     /locus_tag="VF061_11760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX6670232.1"
                     /translation="MLNRLIAWSVNNRLLIWFLTAAVVALGILAVRQMPLEALPDLSD
                     VQVIVQADYSEQAPRIVEDQVTYPIAAEMLKVPGARTVRGYSFFGVSFVYVIFEDGTD
                     LYWARSRVLEYLSGIKGRLPPAVTPSLGPDATGLGWVYQYALEDTTGRRSLAELRSLQ
                     DWYLRYALTAVPGVSEVASLGGFEKQYQVDVDPAKLQGYGISITQVMSAIQNANADVG
                     AMVMELSEREYMVRGLGYLKSVSDIENVVVGATAAGTPIRVAELGRVGVGPAVRRGVA
                     DLDGRGDAVGGIVI"
BASE COUNT          558 a         1182 c         1324 g          602 t
ORIGIN      
        1 cggccgtccg ctaccctcct caacgcctct taatgtccgg ttcatcacgg cttgccctcc
       61 tcacggctag cctccttacg tgccgacctg cagggggcgg tgtcggcagg agccaaaggt
      121 gtggagagct catgaagcag gatcgccatc cgcgggggcg gattcggatc cccgtcctca
      181 gggttgccgg ctggatcggg ttgctcttgg tcgggggagg cagtggactc cgtgcccagg
      241 caccggtcac ggggacagtg cccctccgcc tcggtcagat gtaccgggcg gtcgaagcag
      301 caaaccctcg catcgccgcg gccggcgcac tagcacgggc ggcagacgcc cggatcgcgc
      361 cggcgcggcg tccgcccgat ccccagctcc agttcgccct catgaaccgg agcctgccgg
      421 gtttcgggct ggccgatccg ctgggaatga accaggtgca actgatgcaa atggtcccgt
      481 tccccggcaa gctccgcatg gcggggcagg tggcctccgc ccgggcggaa gctgagcggg
      541 tccgggcatt ggacgtgtcc tgggacgcgc gggcccgggc ggccatggcg ttctacgagc
      601 tttaccagat agaccactcg ctgcaggtgg ccgaaggaac tgtcaggatc ctgcaggatc
      661 tcgccgtgac ggcgggtacg atgtacggcg tcggtgaggc ccggcagccg gacgtgctcc
      721 gcgcgcaagt ggagatcgcc cggatgtcgg aagacatcat tcgcatgcga accgagcgcg
      781 tctcggcggg ggcgagactg aatgcgctgc tgctcctcga tccgtccgcc ccggtcggtt
      841 caccggtcca accagcattc ccggacaccc tgccgccgct cgacagcctc atcgccgaag
      901 cggagcgcaa ccggccgatg gtccaggcgg gcgaggcgga ggtgcgggcc gcggaggccg
      961 ggatacggct ggcgaggcgc gagatctggc ccgatctcca ggtgggcgtc cagtacgggc
     1021 agcggccgat ggatggcggg accgaccgca tggtcagcct catgctggga gtgaacctcc
     1081 cgatcttcgc cgggagccgc cagctcgcca tgcgacggga agccttggcg atgcggcaga
     1141 tggccgaggc ggatctcgcc gcgatgcagg ccgacacccg tggtcgggtg gcggagctct
     1201 atgccgcggc ggagcgcgcc cgccggctgg gagagctgta tcaggggacc atcttgcccc
     1261 agacgcagac cacggtctcg gccgccctcg cgtcctatcg cgtcgggggg gtggatttca
     1321 tgacgttgct cgacaaccag atgacggtga accgctaccg ccaggaccta tatgcgctcc
     1381 acgcgcagcg gggccaggcc ctggccgagt tggagatgct gctcagccgc cctctgttca
     1441 accctgatga cacggtgctc gcgtccggag gacgccagtg aagacctcat caacggtgcc
     1501 cacccaggag acggaggctc agcctttcgg ccctctcgta ccgctggggc ggcggcggct
     1561 tcgactggcc gtgctggccc tcgccctggg agctgccggg ggagttgcct tctgggcgac
     1621 ccgggcgtcg gtgccggcgg acgaggcggc ggggcacgca cacggcgccg cacccggcgg
     1681 cagcgaggca atgcccgtga cgctcgcccc acgcgaccag gggcggatcg gcgtcacctt
     1741 cgcccctgtc gtacgggcac cactcggcct atcggtacgc accgtggcgc aggtgagcta
     1801 tgacgagacc cgggtcaaga ccgtcgctcc gctgattgag gggtgggtag accagctctt
     1861 cgtgaacttc accggtcaag cggtgcgaac cggggagccg ctcttcacca tctactctcc
     1921 catggtggtt acggcgcagc aggagcttct gcttgcccgg cggctggtgg gcgacttgtc
     1981 cggcggcacg cccgaggcga gacagagcgc acgcgatctg ctggaatcgt cgcggcgccg
     2041 gctccagtac tggggggtgc cgcaggagga gatcgaacgg gtggaggaga cgggtgaagt
     2101 acgtcggacg gtgacgctcc ggtcccccta cggcggggta gtggtggaca agccggtcct
     2161 cgcaggacag cggatcatgc cgggggacgt ggcctacaag atcgccgacc tgagccgagt
     2221 ctgggtcgaa ggcgaggtgt ttgagcggga ccttcccgcg gtgcggatcg gcctgcgggt
     2281 caccgccgag ttcgcggccc ttcccgggat cgttcgtgag ggccgactga cgtatgtcta
     2341 tcccactgtg aatcccgaga cccgcaccgc acggattcga gtgacgctgg cgaatcccgg
     2401 ctcagtgctc aagccgggca tgtacgccac catccgcttc tctgcgccca ccgatagcgt
     2461 gtacagtgtg ccccgctccg ctgtgctcgc taccggggag cgggacttcg tcttcgtccg
     2521 ggcccgcgac ggccggttcg tgccgacgct cgtcaccctc ggcgccgcta ccgacgaccg
     2581 cgttgagatc ctgaggggct tgagtgtggg agatacggtg gtggcgtcag gcacctttct
     2641 cgtggatgcc gagtccaatc tgggctctct catgggtggc atgggcaaca tgcccggtat
     2701 ggacgtaacc gcgcctgccg gcagtgcggc cacgcctgga gcccagggcg gcgatgcagg
     2761 tccccacacg gttcatcccg cggaggagta ggaccgtgct caatcgtctc atcgcgtggt
     2821 ccgtcaacaa ccggttgctg atctggttcc tcacggcggc ggtggtcgcg ctgggcatcc
     2881 tcgccgtgcg ccagatgccg ttggaggcgc tgccggacct gagtgatgtg caggtgatcg
     2941 ttcaggccga ttacagcgaa caggcgccgc ggatcgtgga ggaccaggtc acctatccca
     3001 tcgccgccga gatgctgaag gtgccggggg ctcggacggt gaggggctac tcattcttcg
     3061 gggtgtcgtt cgtgtatgtc atcttcgaag acggaaccga cctctactgg gcgcgcagcc
     3121 gggtgctgga atacctgagc ggcatcaagg gcaggctccc cccggcagtg acgccctcgc
     3181 tcgggcccga tgccacgggg ctcggatggg tgtaccagta cgccctcgag gacactaccg
     3241 gacggcggtc gctggccgag ctccggagtc tgcaggactg gtatctccgc tatgcgctga
     3301 cggcggttcc cggcgtctcc gaggtggcgt ctctcggggg gttcgagaag cagtaccagg
     3361 tggacgtcga tcccgccaag ctccagggct acggcatttc catcacccag gtgatgagcg
     3421 cgatccagaa cgccaatgcc gacgtgggcg ccatggtcat ggagctctcc gagcgggagt
     3481 acatggtgcg ggggctcggc tacctcaaat cggtgtccga catcgaaaac gtggtcgtcg
     3541 gggccacggc ggcgggcacc ccgatccggg tggccgagct gggacgggta ggcgtggggc
     3601 cggctgtgcg gcgcggggtg gccgacctgg atgggcgggg cgacgcggtg ggaggcatcg
     3661 tgatca
//
LOCUS       DASUYN010000601         4287 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_848351, whole genome shotgun sequence.
ACCESSION   DASUYN010000601 DASUYN010000000
VERSION     DASUYN010000601.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4287)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4287)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4287
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_848351"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..706
                     /locus_tag="VF061_11765"
     CDS             <1..706
                     /locus_tag="VF061_11765"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX6670233.1"
                     /translation="VPVPLGDRFAFDVARIVETARRERARVIVVNSPNNPTGSALPDG
                     AVEHILAETGALVVCDEAYQDFGGPTAIPLLRRSARVVVLRTFSKAMGMAGLRFGLAL
                     AHPEVARELAKGKLPYNVNLVTLAAADVALDHAEALAARTRAIAETRDRFLPRLAAVA
                     GIEVFPTAANFVLIRCRARPAGEVFRRLHEEHGILVRDVSGAAELAECLRISIGTEED
                     MEAVLAALRTILEEGR"
     gene            703..1296
                     /gene="hisB"
                     /locus_tag="VF061_11770"
     CDS             703..1296
                     /gene="hisB"
                     /locus_tag="VF061_11770"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: protein motif:HMM:NF002111.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004424 - imidazoleglycerol-phosphate
                     dehydratase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase HisB"
                     /protein_id="HEX6670234.1"
                     /translation="MSARVGEIRRTTKETDLYVRVALDGRGEAQVKTGIGFFDHMLEA
                     LARHGLLDLTVEAQGDLHVDGHHTVEDTGIALGAAIERALGDRAGIRRYGDALVPLDD
                     ALVRAVVDVSGRPYIHYDIEIPKWQMLGDYDVFLTPEFFRAVVLNAGLTAHLDLVRGE
                     NPHHIVEAAFKAFARALDAATSLDPRVAGVPSTKGAL"
     gene            1293..1913
                     /gene="hisH"
                     /locus_tag="VF061_11775"
     CDS             1293..1913
                     /gene="hisH"
                     /locus_tag="VF061_11775"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: protein motif:HMM:TIGR01855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HEX6670235.1"
                     /translation="MIAVVDYGVNNLRSVVRAFEAGGYQATLTSDPDQVRTADRVLVP
                     GVGNFGQGTRNLAATGLGEAVREVAGAGRPVMGICLGLQLLFAASEEAPEARGIGLLP
                     GRVQRFATSLHVPHVGWARVDLTEAGRAHPVLGPLFGGEPMFFYHVHSYHPTDLPADS
                     VLGTGEYGTPFPTLVGRGPVIGAQFHPEKSQRGGIELLSAFARWTP"
     gene            1910..2377
                     /locus_tag="VF061_11780"
     CDS             1910..2377
                     /locus_tag="VF061_11780"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEX6670236.1"
                     /translation="MTSVRVSLVDVYVLRRAEDGLRCLVLRRGAGGRCPGSWETVHGH
                     IEEGERPSEAAIRELEEETGLAPQRLYNLSRVETFYQHRKDEVALVPVFVAFVAPETP
                     VRLGPEHDAHDWLPPAAAGTRFAWPRERRALEDAVQLLGAGDGGAVEDVLRVC"
     gene            2371..3123
                     /gene="hisF"
                     /locus_tag="VF061_11785"
     CDS             2371..3123
                     /gene="hisF"
                     /locus_tag="VF061_11785"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: protein motif:HMM:NF013168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HEX6670237.1"
                     /translation="MLARRIIPCLDVAAGRVVKGVHFESLRDAGDPVEQAARYDAEGA
                     DELVFLDISASPDERRTTLEMVARVADSIFIPFTVGGGIRSVADAGAALRAGADKVSV
                     NTAAVRDPGLVSRLADSFGSQCIVAAVDARRVKGRFTVMVNGGREETPLEAVSWMREL
                     ETLGAGEILLTSMDRDGTGAGYDLELLRAAAGSVGIPVIASGGAGNLAHLAEALEAGA
                     HGVLAATIFHFRGSSLPEARAFLRERGYPVRP"
     gene            3120..>4287
                     /locus_tag="VF061_11790"
     CDS             3120..>4287
                     /locus_tag="VF061_11790"
                     /inference="COORDINATES: protein motif:HMM:NF016906.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NosD domain-containing protein"
                     /protein_id="HEX6670238.1"
                     /translation="MTLILSTLLLTLVAADLAAEAAAPCLRPSRAGTQVQGEVRICPG
                     RYRIADPSERGVIVAASSGTRIDLTGVVLESGDSVPARFTGIGVASKDVDAVSILGGT
                     IRGYRIGLRLEGGHRHRVSGTDVSGSRAAALRSTATRPDTGDRLDPFRLAALTDAGAG
                     LVLVRTAGASITGVAANAAQHGIGLIDARGSYLADNQVTGNSGWGISLWGSSRNVVIR
                     NRLQYTARCAPPTVDCHASAILLREGSDSNTIADNDLTASSTGLRILGQPPLTRPSIG
                     NLIFRNDASGSGVGFAAGHSWNLTLLENRSDSAAFGFRLDHLNGSVVRGNTVIGSRIA
                     AIALEHGSDNAIEANVLLGGRVGLMVTAPAKGGGPSRGHRIDDNVVGGVEQGILL"
BASE COUNT          557 a         1497 c         1621 g          612 t
ORIGIN      
        1 cgtccccgtg ccgctgggcg atcgcttcgc cttcgacgtg gcccgcatcg tggagaccgc
       61 gcgtcgcgag cgggcccgcg tgatcgtggt gaactcgccc aacaacccga ccggctccgc
      121 gctgcccgac ggcgcggtcg agcacattct ggccgagacc ggggcgctgg tcgtctgcga
      181 cgaagcctac caggacttcg gtgggccgac cgccatcccg ctgctgcggc ggagcgcccg
      241 ggtggtggtg ttgcgcacgt tctccaaggc gatggggatg gcggggctgc gcttcgggct
      301 ggcgctggcg catcccgagg tggcgcgtga gctggccaag gggaagctgc cctacaacgt
      361 gaacctggtg accctcgcgg ccgcggacgt ggcgctggat catgccgagg cgctcgccgc
      421 gcggacgcgg gcgatcgccg agacccggga ccggttcctc ccgcggctcg cggcggtcgc
      481 ggggatcgag gtctttccga cggcggccaa cttcgtgctg atccgctgcc gcgcgcgccc
      541 ggcgggcgag gtgttccgcc ggctgcacga ggagcacggc atcctggtca gggacgtctc
      601 cggtgccgcc gagctggccg agtgcctgcg gatctcgatc ggcaccgagg aggacatgga
      661 ggcggtgctc gcggcgctgc ggacgattct cgaggagggc cgatgagcgc gagagtgggg
      721 gagatccgcc gcaccacgaa ggagaccgat ctctacgtcc gggtcgccct cgacggccgg
      781 ggtgaggcgc aggtcaagac cggcattggc ttcttcgacc acatgctcga ggcgctcgcg
      841 cgccacgggc tgctcgacct cacggtggag gcgcagggcg acctgcacgt ggacggccac
      901 cacaccgtcg aggataccgg catcgccctg ggggcggcga tcgagcgcgc cctgggggac
      961 cgcgccggga tccgacgcta cggcgacgcc ctggtgccgc tggacgacgc cctggtgcgc
     1021 gcggtggtgg acgtctcggg ccggccgtac atccattacg acatcgagat tcccaagtgg
     1081 cagatgctgg gggactatga cgtctttctc acccccgagt tcttccgcgc ggtggtgctg
     1141 aacgcggggc tcacggcgca cctcgacctg gtgcggggag agaacccgca ccacatcgtg
     1201 gaggcggcgt tcaaggcctt cgcccgggcg ctcgatgccg ccacctccct cgatccgcgg
     1261 gtggccgggg tgccgtccac caagggtgcc ctgtgatcgc ggtggtggac tacggcgtca
     1321 ataacctgcg gagcgtggtg cgcgcgttcg aggccggggg ttaccaggcc acactcacca
     1381 gcgacccgga ccaggtgcgc accgccgacc gggttctggt gcccggcgtg gggaacttcg
     1441 gccagggcac ccggaacctc gccgccaccg gcctgggcga ggccgtgcgt gaggtggcgg
     1501 gcgccggccg cccggtgatg gggatctgcc tcgggctgca gctgctgttc gcggccagcg
     1561 aggaggctcc cgaggcccgg gggatcgggc tcctgccggg ccgggtgcag cgcttcgcca
     1621 cctccctcca cgtgccgcac gtgggatggg cgcgggtgga cctcaccgag gctgggcggg
     1681 cccacccggt gctggggccg ctcttcgggg gagagccgat gttcttctat cacgtccaca
     1741 gctaccaccc gaccgacctg ccggccgact cggtgctcgg caccggcgag tacggcaccc
     1801 cgttcccgac cctggtgggg cgggggccgg tgatcggggc gcagttccac ccggagaaat
     1861 cgcagcgcgg cggcatcgag ctgctgagcg cgttcgcccg ctggacccca tgacctcggt
     1921 gcgcgtgtcg ctggtggacg tctacgtgct gcggcgcgcc gaggacgggc ttcgctgcct
     1981 ggtgctccgc cgtggggccg ggggccgctg ccccgggtcc tgggagaccg tgcacggaca
     2041 tatcgaggag ggtgagcgac cgtcggaggc cgcgatccgg gagctggagg aggagaccgg
     2101 gctggcgccc cagcggctct acaacctgag ccgggtggag accttctacc agcaccggaa
     2161 ggacgaggtg gcgctggtcc cggtcttcgt cgccttcgtg gccccggaga caccggtgag
     2221 gctggggccg gagcacgacg cgcacgactg gctgccgccg gccgcggcgg gcacccggtt
     2281 cgcctggccg cgcgagcggc gggcgctgga ggatgccgtg cagctgctgg gcgcgggtga
     2341 cggcggcgcc gtcgaggacg tactgcgggt atgctagcgc ggcggatcat cccctgcctc
     2401 gacgtcgcgg ccggccgggt ggtgaagggt gtccacttcg agtccctgcg cgatgccggc
     2461 gacccggtgg agcaggcggc ccgctacgac gcggagggcg cggacgagct ggtgttcctc
     2521 gacatctccg ccagcccgga cgagcgccgc acgacactgg agatggtcgc ccgggtcgcc
     2581 gattccatct tcatcccgtt taccgtgggc ggcggcatcc gctcggtcgc cgacgccggc
     2641 gccgcgttgc gggccggggc ggacaaggtc tccgtgaaca ccgccgcggt gcgggatccg
     2701 gggctcgtct cgcggctcgc cgacagcttc ggcagccagt gcatcgtcgc cgcggtggac
     2761 gccaggcggg tcaaaggccg gttcaccgtc atggtgaacg gcggccgcga ggaaacgccc
     2821 ctggaagcgg tctcgtggat gcgggagctg gagacgcttg gcgcggggga gatcctgctc
     2881 acctccatgg accgcgacgg caccggcgcc ggctacgatc tcgagctgct gcgggccgcc
     2941 gccgggtcgg tcggcatccc ggtcatcgcc tccggcggtg ccggcaacct cgcccacctg
     3001 gccgaggccc tggaggccgg ggctcacggc gtgctggcgg cgaccatctt ccacttccgc
     3061 ggctcctcgc tgcccgaggc gcgcgcgttt ctccgcgagc ggggttaccc cgtccggcca
     3121 tgacgctcat tctctcaacc ctccttctca cgctggtggc cgccgacctc gcggccgagg
     3181 cggccgcccc ctgcctccgg ccatcccggg cgggcaccca ggtgcagggc gaggtgcgga
     3241 tctgtcccgg gcggtaccgg atcgcggacc cctccgagcg gggcgtcatc gtcgccgcgt
     3301 cctcgggcac ccgcatcgat ctcaccgggg tcgtgctgga gagcggggac tcggtgccgg
     3361 cgcggttcac cggcatcggg gtcgccagca aggacgtgga cgcggtgtcc atcctgggcg
     3421 ggaccattcg cggctatcgg atcgggctgc ggctggaagg cggccaccgg catcgggtga
     3481 gcggcaccga tgtgtcgggg agccgagccg cggccctccg ctccaccgcg acgcgcccgg
     3541 acacgggcga ccgcctcgat ccgttccgcc tggccgccct caccgacgcg ggcgcgggcc
     3601 tggtcctggt gcgcaccgcg ggcgcgagca tcaccggagt cgccgcgaat gccgcgcagc
     3661 acgggatcgg cctcatcgac gcgcggggaa gctatctcgc ggacaaccag gtgaccggca
     3721 actcgggctg gggcatcagt ctctggggct cgtcacgcaa cgtcgtgata cgcaaccggc
     3781 tgcagtacac ggcgcggtgc gcgccaccca cggtggactg ccatgcgtcc gcgatcctgc
     3841 tccgcgaggg gagcgactcc aacaccatcg cggataacga cctcaccgcc tcgagcacgg
     3901 ggctccgcat cctcggccag ccgccgctga cgcgtccctc catcggcaac ctgatctttc
     3961 ggaacgacgc ttcgggaagc ggggtgggtt tcgccgccgg ccacagctgg aacctcaccc
     4021 tgctggagaa ccggagcgac agcgccgcct tcggcttccg gctggaccac ctgaacggca
     4081 gcgtggtccg ggggaacacg gtgatcggct cccggatcgc cgcgatcgcg ctggagcacg
     4141 gcagcgacaa cgccatcgag gccaacgtgc tgctcggcgg ccgggtgggg ctcatggtga
     4201 ccgctccggc gaagggcggt ggccccagcc gcgggcaccg catcgacgac aacgtggtgg
     4261 gtggggtgga gcaggggatc ctgctgc
//
LOCUS       DASUYN010000602         3374 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_411606, whole genome shotgun sequence.
ACCESSION   DASUYN010000602 DASUYN010000000
VERSION     DASUYN010000602.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3374)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3374)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3374
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_411606"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            124..870
                     /locus_tag="VF061_11795"
     CDS             124..870
                     /locus_tag="VF061_11795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670239.1"
                     /translation="MRRFLPAAALALLLPASAMAQTPRLIVELEGGPVWQSYNDVEVP
                     NDGTATRFALDELAGTGPWPAGRLYLTWNLSERHGLRALVAPFSLTETGTPAEPIGFA
                     GADYAAGEPVEATYTFNSYRLTYRYRALGGDRSTAWIGLTAKIRDATIALEQGPTSSR
                     KDDVGFVPLLHLAGDWYFAPDWRLRLDADGLAGGPGRAIDAALKLGYDLDRNWTVSAG
                     YRTLEGGADVDEVYTFAWLHYLVGSVSYRW"
     gene            1090..1650
                     /locus_tag="VF061_11800"
     CDS             1090..1650
                     /locus_tag="VF061_11800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670240.1"
                     /translation="MRDRDGFVHRKGSPRFPFRSDPLPRPWEPVRRYHKTEARLLAAM
                     LACRDRLLAWYPRVLVPALDPEVRTPVAALLLVWEWWDYASGPCPRCGGPAVATCFGG
                     VMSIGSVSGCCAICRGVVTREGRGMPWVKHYCDRATEGTPYRIPFRQFPGGWGLGGEP
                     RDLVAVLRELGAAGVPDPHARAFRRR"
     gene            1890..3275
                     /locus_tag="VF061_11805"
     CDS             1890..3275
                     /locus_tag="VF061_11805"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEX6670241.1"
                     /translation="MGTQQMSLAAAVRSTFRGTLIAPGDPTYDEARRVWNGTVDRHPA
                     LIARCRDAEDVVRVVELARENGLPVAVRGGGHNVAGDAVCDGGLVVDLSAMRSITVDP
                     QRRLVRAEGGALWGELDRATQGHGLATTGGIVSTTGVAGLTLGGGIGWLARSYGLACD
                     NLVSVNLVTADGRQRTVSAEENPDLFWAVRGCGGNFGVATSLDFRLHTVGPVLGGLLV
                     HPFAAARDLLRLYRDVVEGAPPELAIYAVLTTSPAGDPAGVIAACYNGSPGAGELALR
                     RLRTYGGPLADGIETTSYTAVQTMLDAFYPRGLLNYWKSSFLTELPDAAIDSLLRCTE
                     QRPTPMCHLAIEQLGGAIRGMGPDETAFAHRDMPYCFLCLGVCTDPAEYDACVRWVRS
                     TWEAMQPYAAGVYVNYLGTVADEGSERVHAAYAHGHYERLAALKAQYDPGNMFRVNQN
                     IEPAAATTPSP"
BASE COUNT          451 a         1212 c         1213 g          498 t
ORIGIN      
        1 tcatcgagct cgccggaaca tgtggttttg accttcggtt atcactccat tataccggac
       61 ccatgtggca ctgaggggcc cgccacggag gctacggcgt cataaggggt gtatgatcgt
      121 gggatgagac gctttctccc agccgctgcc ctcgccctgc tcctccccgc ctcggccatg
      181 gcccagaccc cccgcctcat tgtcgagctc gagggcgggc cggtctggca gagctacaac
      241 gacgtcgagg tccccaacga cggcaccgcc acgcgcttcg cgctcgacga gctggccggc
      301 accggcccct ggcccgccgg ccggctctat ctcacgtgga acctcagcga gcggcatggg
      361 ctccgtgcgc tggtcgcgcc gttctcgctc accgagaccg gcaccccggc ggagccgatc
      421 gggttcgccg gcgccgacta cgcggcgggc gagccggtcg aggccaccta caccttcaac
      481 tcgtaccgcc tcacctatcg ctaccgcgcg ctcggcggcg accgctcgac cgcgtggatc
      541 ggccttaccg ccaagatccg cgacgcgacc atcgcgctgg agcagggacc gacctcgagc
      601 cgcaaggacg acgtcggctt cgtcccgctg ctgcacctgg ccggagactg gtacttcgcc
      661 cccgattggc gcctccggct cgacgccgac ggcctcgccg gcggccccgg ccgcgccatc
      721 gacgccgccc tgaagctcgg ctacgacctc gaccggaact ggaccgtctc ggcgggctac
      781 cgcacgctgg aggggggagc ggacgtggac gaggtgtaca cgttcgcgtg gctgcactac
      841 ctggtggggt cggtgtcgta ccggtggtag ggcggtcctc actggcccgg tgcgccggcc
      901 gcatgcgcgc ggctgtcaga tgccccggct atgtttccgg tgcaccccgg ccgcctccgt
      961 ctcggcggcc gggcatggag agtgacggcg agagccccgg ctcgatgacc cgtccgccaa
     1021 ccgtagccct gcctccgccc ggaggcgcac ggtggcccag ccggccggct ccccctgggc
     1081 gccggaccca tgcgcgatcg agacgggttc gtccatcgaa agggctcgcc caggtttccc
     1141 ttccgctccg atcccctgcc ccgcccgtgg gagccggtcc gtcggtacca caagaccgaa
     1201 gctcgcctgc tggccgcgat gctcgcctgc cgcgatcgcc tgctcgcgtg gtatccccgg
     1261 gtcctggtgc ccgcgctcga ccccgaggtc cgcacgccgg tggcggcgct cctgctggtc
     1321 tgggagtggt gggactacgc ctcgggcccc tgcccgcgct gcggcgggcc cgcggtggcg
     1381 acctgcttcg gcggcgtgat gagcatcggg tcggtgagcg ggtgctgcgc catctgccgc
     1441 ggcgtggtga cccgtgaggg ccggggcatg ccgtgggtca agcattactg cgatcgggcc
     1501 accgaaggca cgccgtatcg catcccgttc cggcagtttc ccggcggatg ggggctcggg
     1561 ggcgagccgc gggacctcgt cgcggtgctg cgcgagttgg gggcggcggg cgtgccggat
     1621 ccccatgccc gggccttccg ccgtcgctag gacgggcggc gtcgacttcc caaggatcag
     1681 atcaactgtc ggacccatgc tcgaatcggc gaagaagctg tcgatctggt cgaggcgccg
     1741 gaaggcagga cggcgccgag ggatgaccaa tcttgccggg ccgatggccg ccctgcaccg
     1801 ctgagacggc gtcgtcccgc acggcccatg gcgcggcgcc gtcccgcgca ctaccgtagc
     1861 ggcacagcgc ctgagccagg aggtgatcca tgggcacgca gcagatgtcg ctcgcggcgg
     1921 cggtgcgctc gacctttcgc gggacgctga tcgcacccgg cgatcccacg tacgacgagg
     1981 cgcgccgggt gtggaacgga acggtggacc ggcaccccgc cctgatcgcg cgatgcaggg
     2041 acgcggagga cgtggtccgg gtcgtggagc tcgcgcgcga gaatgggctc ccggtcgcgg
     2101 tccgaggcgg ggggcacaat gtggccggcg atgccgtgtg cgacggcggg ctggtggtgg
     2161 acctgtcggc aatgcggtcg atcacggtgg atccccagcg ccgcctggtg cgcgccgagg
     2221 gcggggcgct ctggggggag ctggaccggg cgacgcaggg gcacgggctc gccacgaccg
     2281 gcggcatcgt ctccacgacc ggggtggccg gcctgacgct cggtggcggg atcgggtggc
     2341 tggcccggag ctatggactc gcctgtgaca acctcgtctc cgtcaacctc gtcaccgccg
     2401 acggccggca gcgcacggtg agcgccgagg agaacccgga cctcttctgg gccgtccggg
     2461 gctgcggcgg caacttcggc gtcgcgacct cgctcgactt ccggctccac accgtcggcc
     2521 ccgtgctcgg cggcctgctg gtgcatccgt tcgcggccgc gcgggacctg cttcggctct
     2581 accgcgacgt ggtcgagggc gcaccgccgg agctcgcgat ctacgcggtg ctcacgacct
     2641 cccccgcggg cgacccggcc ggggtgatcg ccgcgtgcta caacggctcc cccggcgccg
     2701 gcgagctcgc gctgcgccgc ctgcggacgt acggcggacc gctggcggac gggatcgaga
     2761 cgacgtccta caccgccgtg cagaccatgc tggacgcctt ctatccccgc gggctgctca
     2821 actattggaa gtcgagcttc ctcaccgagc tgccggacgc agcgatcgac agcctcctcc
     2881 gctgcaccga gcaacgcccc acgccgatgt gtcacctggc gatcgagcag ctcggcggcg
     2941 cgatccgcgg gatggggccg gacgagacgg ccttcgcgca ccgcgatatg ccgtactgct
     3001 tcctctgcct gggggtgtgc accgatccgg cggagtacga cgcctgcgtc cgctgggtgc
     3061 gcagcacctg ggaggcgatg cagccgtacg cggccggggt ctacgtcaac tacctgggca
     3121 ccgtggcgga tgaggggagc gagcgggtcc acgcggcgta tgcgcacggt cactacgagc
     3181 ggctggcggc gctcaaggcg cagtacgacc cggggaacat gttccgggtg aaccagaaca
     3241 tcgagccggc ggccgcgacc acaccgtcac cctgaacgaa gcaggagggc catgccgaca
     3301 tggtcccttc gctgcgccca gggtgacaat gggcgtaact agccggcgac tccgatctgg
     3361 cgcagcatgg tcgc
//
LOCUS       DASUYN010000603         2404 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1955481, whole genome shotgun sequence.
ACCESSION   DASUYN010000603 DASUYN010000000
VERSION     DASUYN010000603.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2404)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2404)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2404
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1955481"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(20..796)
                     /locus_tag="VF061_11810"
     CDS             complement(20..796)
                     /locus_tag="VF061_11810"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX6670242.1"
                     /translation="MRLTFLGTGTSFGVPQIGCDCPVCRSTDPRDKRTRSGAVVQEAG
                     ATILIDTPPELRLQLIAGGISSIDAVAYTHQHADHINGIDDLRMFSVRRRRPLPVYGP
                     AETLDRLRRSFDYIFDESALPYEGTSKPTLEIHEVEPGRPVRMAGVEALPLAFQHGHL
                     RVFGYRFGKLAYLTDVKAIPDAERRRLQGLEVLVVNALWWRPHPTHLSIAEAVEAAQA
                     LGARRTYLTHLTHETGHAELSAQLPEGVKPAYDGLTVEIP"
     gene            complement(801..2261)
                     /gene="pyk"
                     /locus_tag="VF061_11815"
     CDS             complement(801..2261)
                     /gene="pyk"
                     /locus_tag="VF061_11815"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HEX6670243.1"
                     /translation="MPDSVRRTKIVATLGPAWSEPAQMTALLDAGVNVVRINASHATP
                     EIRAGWIAELQTIMAGRAESAALLVDLQGPRIRVGTLEVPMRLEPGQRVVFAPESEAR
                     PGEIPTTYEALAADVHVGARILLDDGLLSVEVTGVRDSRVEAVVHYGGELKSHKGMNL
                     PGLEVSAPALTEKDREDVAQAAALGVDYIALSFVRRPEDMEGLRALVPRTTKLIAKIE
                     KDTALRNLCGILDASDAIMVARGDLGVELPFEEVPLMQKQIIREASLHGKPVITATQM
                     LESMINAPRPTRAEASDVANAILDGTDAVMLSAETAVGRYPLEAVRAMDRIAREMELQ
                     RPGRGVTIDAALGRRANEGVNLPNHRAGQSGPVRTEDAIAVAVCAAAEMLSAPVILCF
                     TSSGFTARKVATCRPSVPVFACTPEPETFRQLSLVWGVTSALIDHSTDYDAMLSVARR
                     RILERGLARPGERLVVTAGVPFDMPGTTNLLKIEAV"
BASE COUNT          338 a          855 c          848 g          363 t
ORIGIN      
        1 cgtccatacg ccagcttcat cacggaatct ccacggtgag cccgtcgtat gcgggcttca
       61 cgccctcggg cagctgcgcc gagagctcgg catgcccggt ctcgtgcgtg aggtgagtca
      121 gatacgtgcg tcgcgctccc agcgcctgtg ccgcctcgac cgcctcggcg atgctgagat
      181 gggtgggatg gggccgccac cagagggcgt tgacgaccag cacctccaat ccctggagcc
      241 ggcgccgctc ggcgtcggga atggccttca cgtcggtcag gtacgccagc ttgccgaagc
      301 ggtacccgaa cactcgcagg tggccgtgct ggaacgcgag cggcaaggcc tccacccccg
      361 ccatgcgcac ggggcggccc ggctccacct cgtgaatctc cagcgtcggc ttggaggtgc
      421 cctcgtaggg aagggccgac tcgtcgaaga tgtagtcgaa ggaacgccgg agccggtcga
      481 gggtctcagc ggggccgtac accggcagcg gccggcgccg gcggaccgag aacatccgca
      541 ggtcgtcgat cccgttgatg tgatcggcgt gctggtgggt gtaggcgacc gcgtcgatgc
      601 tggagatccc gcccgcgatg agctgcagtc gcagctcggg tggcgtgtcg atgaggatgg
      661 tggcgccggc ctcctgcacc acggccccgc tccgggtccg cttgtccctc gggtctgtcg
      721 agcggcacac cgggcagtcg cacccgatct ggggcacgcc gaacgacgtg cccgtcccca
      781 ggaaggtgag ccgcatcgtc ctaaactgct tcgatcttca ggaggttggt agtgcccggc
      841 atgtcgaagg gaacgcccgc ggtgaccacc agccgctcgc ccggccgcgc gaggccccgc
      901 tcgaggatcc ggcggcgggc gacggagagc atggcgtcgt aatcggtgga gtggtcgatc
      961 agggccgacg tcacgcccca gaccagggaa agctggcgga aggtctcggg ctccggcgtg
     1021 caggcgaaga ccgggaccga cgggcggcag gtcgccacct tccgggcggt gaacccgctg
     1081 ctggtgaagc agaggatcac cggcgcgctc agcatctccg ccgcggcgca gacggcgacc
     1141 gcgatcgcat cctcggtccg gaccggaccg ctctgccccg cgcggtggtt gggcaggttc
     1201 accccttcgt tcgcccgccg accgagcgcg gcgtcgatgg tgaccccgcg tccgggacgc
     1261 tgcagctcca tttcccgggc gatgcgatcc atggcgcgca ccgcctcgag gggatagcgc
     1321 ccgacggcgg tctcggccga cagcatgacc gcgtcggtcc cgtccaggat cgcgttggcc
     1381 acgtcggagg cctcggcgcg ggtcggccgc ggggcgttga tcatcgactc cagcatctgg
     1441 gtggcggtga tcaccggctt gccgtggagg ctcgcctccc ggatgatctg cttctgcatc
     1501 aggggcactt cctcgaacgg cagctccacg ccgaggtcgc cgcgggcgac catgatggcg
     1561 tccgaggcat cgaggatgcc gcagaggttc cgcagcgcgg tgtccttctc gatcttggcg
     1621 atcagcttgg tggtgcgggg caccagcgcg cgcagccctt ccatgtcctc gggccgtcgc
     1681 acgaacgaga gcgcgatgta gtccaccccc agagcggccg cctgcgccac gtcctcccgg
     1741 tccttctcgg tgagcgcggg cgcgctgact tccagcccgg ggagattcat ccccttgtgc
     1801 gacttgagct cgccgccgta gtgcacgacc gcctcgaccc gcgagtcgcg cacgccggtg
     1861 acctccaccg acagcagccc gtcgtcgagc aggatccgcg cgcccacatg gacgtccgcg
     1921 gccagcgcct cgtaggtggt ggggatctcc cccggccgcg cctcgctctc gggggcgaag
     1981 accacccgct gcccgggctc gagccgcatc ggcacctcca gcgtgcccac gcggatgcgc
     2041 ggtccctgca ggtccaccag gagcgcggcg gactcggcgc ggccggccat gatcgtctgg
     2101 agctcggcga tccaaccggc ccggatctcg ggcgtggcgt gcgatgcgtt gatgcggacg
     2161 acgttgacgc cggcatcgag gagggcggtc atctgcgcgg gctcggacca cgcgggtccc
     2221 agcgtggcga cgatcttggt gcgtcgtacg gagtcgggca tcccgggatt ctaacgtcgc
     2281 cccgtcagcg gtgcatcacg acctctcccc ccacgatcgt gagaaccgcc cgcccggcgc
     2341 ggaaggcctc ccctgcgccg cgctcgaccg ccgcatccac gtcccaggcg accaggtccg
     2401 cctc
//
LOCUS       DASUYN010000604         5262 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1733832, whole genome shotgun sequence.
ACCESSION   DASUYN010000604 DASUYN010000000
VERSION     DASUYN010000604.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5262)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5262)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5262
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1733832"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1616)
                     /locus_tag="VF061_11820"
     CDS             complement(<1..1616)
                     /locus_tag="VF061_11820"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX6670244.1"
                     /translation="MTAQGPDLHAALAGRYRLERELGRGGMATVYLAQDLQHDRRVAL
                     KVLRLEMAAGLGSDRFLREIRIAAQLTHPHILPLHDSGEAEGRLYYTMPFVDGESLRQ
                     RLQRERQLPLEDALAIAREVAEALDYAHRRGIVHRDIKPENILLEDGHAVVADFGLAR
                     ALDEAGAERLTGSGLTLGTPDYMSPEQAAGDRALDGRTDIYSLGCVLYEMLSGEPPFA
                     GASVQAKLARRLTDPVPSLGPLREVPLLVDRAVGRALARVPADRFPTAGGLARALRAE
                     APSADTLPSLPPVGRRRRLVGALLAAFTLAAGTYLLRDGQGGTSGPAGERVTRLAILP
                     FDNLGSPDDAYIAEGLAEELEAHLAGAPALHLVAPQASRQDRRDTSSLRELAHELAVP
                     YVVRGTVRWGSATGDADRVRISPRLIRVEDGATLWSSEYDRRRADVFAVQREIAAQVA
                     GALGHRLPAANRPAPTADLRAYEHYLQGRSYLNRGRRAADLQAAVRMFERAVELDPGF
                     AAAYASLGFAHVVQYWFHIDRSDARLARARA"
     gene            complement(1811..4903)
                     /locus_tag="VF061_11825"
     CDS             complement(1811..4903)
                     /locus_tag="VF061_11825"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX6670245.1"
                     /translation="MKSFTDIFIRHPVLAAVVNLVIVLVGWRALTGLPVQQYPQIESS
                     SVIISTVYYGASAETVRGFLTTPIERAVSAIGGVDYVESTSRAGVSTVTVRLKLNHNS
                     TQALAEVTARLQQVRSELPAEAEPPVIEVQRADRPYATFYLSFTSPERTVPQITDWLS
                     RTIQPQLATIPGVQRVTNSEGGQPIAMRIWIDPDKLAALNLAPGDVQAALQRNNYLAA
                     VGQTKGDQVQVNLLANTDLRSVEEFSNLIVADREGAIVRLSDVARVELGAEEATLVAK
                     YNDQEGVYLGVWPLVGANEIEVQKRLVAEMDRLRPTLPRDIEMRLVWDGTRFMRDAIQ
                     EISKTLGETMLIVGFAVFLFMGSLRTALVPLVAMPVSLIGAAIVMYAFGFSLNLLTIL
                     AIVLSVGLVVDDAIVVVENIERHVREGKSRRQAALIGARELVGPVIAMTITLAAVYTP
                     IGFQGGLTGSLFLEFAITLAAAVVVSGIVAVTLSPAMSMKFVHPHGEEGRLTRLVNRG
                     FDWIRDQYARLLDGALQIRWTIVVAALLIMAAAWPLYMFSRRELAPVEDQTHISLFLD
                     APPDASLAATNRASLEVVKAIRSFPETEFTWSLTANWGGFGGLVAKDWRERERSTEQM
                     YGEVFGKVSQIPGLRVFPRLDPPLPTPGQYDVELVLQSDLPPEQMLETVGQVVGAGWA
                     SGKFLYVDTDLKIDLPEARVVIDREQVADLGLDLASVGQELGTLLGGGYVNRFNYFDR
                     SYKVIPQIGEKDRATVAPLLDLKIKTPTGELVPVSTFTRIESSTAPRTLNRFQQRNAV
                     RVFGGVQPGVTKEEGLRVLEQAAAAAGGTGIVLDYAGESRQIRHEGGALVVTLGFAVI
                     LIYLVLAAQFRSFRDPLIVLLGSVPLAISGALVFSFLDLTTINIYSQVGLITLVGLIA
                     KNGILIVQFANTLQEQGVEKMAALREASLTRLRPVLMTSAATVFGHFPLVLVTGPGSE
                     ARNSIGTVLVTGMVVGTIFTRFVVPVFYSLIAAQHKPVVMTGEYPVQTPHLEAAAVAH
                     "
     gene            complement(4908..>5262)
                     /locus_tag="VF061_11830"
     CDS             complement(4908..>5262)
                     /locus_tag="VF061_11830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670246.1"
                     /translation="APGASVRVLVPVGALDTVVSVPVSALRKGPQGDHVFAIEPDSAG
                     KLRAHLRTVRSGPVLGEDVLIYDGIRAGEQVATSGSFKLREAVLVAIADPAAQADSGQ
                     QADTSRQAAGAEGAE"
BASE COUNT          810 a         1838 c         1864 g          750 t
ORIGIN      
        1 gccctggcgc gggccagccg ggcgtcgctc cggtcgatgt gaaaccagta ctggacgacg
       61 tgcgcgaacc cgagggaggc gtaggcggcg gcgaatcccg ggtcgagttc gacggcccgc
      121 tcgaacatgc gtacggctgc ctgaagatcg gccgcgcgcc gcccgcgatt gaggtagctc
      181 cgcccctgga ggtagtgctc gtaggcccgg agatcggcgg tcggggccgg acgattcgca
      241 gcggggagcc ggtgccccag cgccccggcg acctgggccg cgatctcgcg ctgcacggcg
      301 aagacgtccg cccgccggcg gtcgtactcc gaggaccaga gggtggcccc gtcttcgacc
      361 ctgatgaggc ggggactgat ccggactcga tccgcgtcac ccgttgcact tccccagcgc
      421 acggtcccgc gcaccacgta tgggactgcc agctcgtggg ccagctcccg gagcgacgac
      481 gtatcgcgcc ggtcctgccg tgacgcttgg ggcgccacca ggtggagcgc gggtgcgccg
      541 gccaggtgag cctcgagctc ctccgccagc ccttcggcga tgtaggcgtc gtccggagag
      601 cccaggttgt cgaaggggag gattgccagc cgggtgaccc gctcgcccgc gggaccgctg
      661 gtgcctcctt gtccgtcacg gagcaggtag gtgccggccg ccagcgtaaa ggccgcgagg
      721 agcgctccca ccaaacggcg ccgccggccc accggcggga gggacggcag cgtgtcagcc
      781 gaaggtgctt cggcacggag cgcccgggcg agacctccgg ccgtggggaa ccggtcggcg
      841 ggcacccggg cgagcgcgcg gcccacggcg cgatcgacca acagcggcac ctcgcgcaag
      901 gggcccaggg atgggaccgg atcggtgaga cgccgggcca gctttgcctg gacgctcgcg
      961 ccggcgaagg gcggctcgcc ggacagcatc tcatagagga cgcagccgag cgagtagatg
     1021 tcggtgcggc cgtcgagcgc ccggtcgccg gccgcctgct cggggctcat gtagtccggc
     1081 gtgcccagcg tcaggccgga cccggtcagc cgctccgctc cagcctcgtc gagggcccgc
     1141 gcgagcccga agtcggccac cacggcgtgg ccgtcctcga ggaggatgtt ctccggcttg
     1201 atgtcccggt ggacgatgcc gcgccggtga gcgtagtcca gcgcttcggc cacttcgcgg
     1261 gcgatcgcga gggcgtcctc cagcggcagc tggcgctcgc gctgcaggcg ctggcgcagg
     1321 gactccccgt ccacgaaagg catggtgtaa tagagcctcc cctcggcctc gccggagtcg
     1381 tggagcggga gaatgtgggg atgggtgagc tgagcggcga tgcggatctc gcggaggaac
     1441 cggtcggagc cgagccccgc ggccatctcc aagcgcagca ccttgagggc cacgcggcga
     1501 tcgtgctgga ggtcctgcgc caggtatacg gtcgccatgc cgccccggcc gagctcacgc
     1561 tcgagccgat agcgcccggc gagagcggca tgaaggtcgg gcccctgagc tgtcacgagg
     1621 tattccggcg ggttggtctg cttacaggct acagcgtagg ccgcctggag gccagaccac
     1681 cacccccgtg aacgctccgg tgaggtggat tacaaagccg cagaggccgc ggaggacacc
     1741 gtgtcctccg cgtcctctgc ggctctctgg ttacggctgc gagctcgcga tgtcgacgag
     1801 agccacagcc ctagtgcgcc accgccgccg cctccagatg cggcgtctgc accggatact
     1861 ccccggtcat caccaccggc ttgtgctgcg cggcgatgag ggagtaaaag accggcacca
     1921 cgaaccgggt gaagatggtg ccgacgacca tgccggtgac cagcacggtg ccgatgctgt
     1981 tgcgcgcctc ggagcccggg ccggtgacga gcaccagcgg gaagtgaccg aacaccgtgg
     2041 ccgcggaggt catcagtacc gggcgaagtc gggtgagtga ggcctcccgc agcgccgcca
     2101 tcttctccac gccctgctcc tgcagcgtgt tggcgaactg cacgatcagg atgccgttct
     2161 tcgcgatcag acccaccagc gtgatcagac cgacctgcga atagatgttg atcgtcgtca
     2221 ggtcgaggaa gctgaagacc agggcgccgg agatcgccag cggcaccgag cccagcagca
     2281 cgatcaacgg atcgcggaag ctgcggaact gcgccgccag caccaggtag atcaggatca
     2341 ccgcgaagcc gagcgtgacg accagcgccc cgccctcgtg ccggatctgg cgcgactcgc
     2401 ccgcatagtc gagcacgatg ccggtcccgc ccgccgcggc cgcggcctgc tccagcaccc
     2461 gcagtccctc ttccttggtg accccgggct gcacgccgcc gaacacccgc accgcgttcc
     2521 gctgctggaa ccggttgagc gtccgcggcg cggtactgga ctcgatccgg gtgaaggtgg
     2581 agaccggcac cagctccccg gtcggcgtct tgatcttgag gtcgagcagc ggcgccaccg
     2641 tcgcccggtc cttctcgccg atctgcggga tgaccttgta gctccggtcg aagtagttga
     2701 accggttcac gtacccgccg cccagcaggg tgcccagctc ctggcccacg ctggcgaggt
     2761 cgaggccgag gtcggccacc tgctcgcgat cgatcaccac ccgggcctcg gggaggtcga
     2821 tcttgaggtc ggtgtccacg tagaggaact tcccgctggc ccaaccggcg ccgaccacct
     2881 ggccgacggt ctccaacatc tgctccggcg ggaggtcgct ctggagcacc agctcgacgt
     2941 cgtactgccc cggcgtgggg agcggcgggt cgagccgggg gaacacccgg agcccgggga
     3001 tctgggagac cttgccgaag acctccccgt acatctgctc ggtcgagcgc tcccgctcgc
     3061 gccagtcctt cgccaccagg ccgccgaagc cgccccagtt ggcggtgagc gaccaggtga
     3121 actcggtctc ggggaaggac cggatcgcct tcaccacttc cagcgaggcg cgattggtgg
     3181 ccgccagcga cgcgtcaggg ggcgcgtcaa ggaagaggct gatgtgggtc tggtcctcca
     3241 ccggcgcgag ctcgcgccgg ctgaacatgt agagcggcca ggccgccgcc atgatgagca
     3301 gcgccgcgac tacgatcgtc cagcggatct gcagcgcgcc gtcgagcagc ctggcgtact
     3361 ggtcccggat ccagtcgaag ccgcggttca ccagccgggt gagccggcct tcctcgccgt
     3421 gggggtgcac gaacttcatg ctcatcgcgg gcgagagcgt caccgcgacg atgccggaca
     3481 ccaccaccgc ggccgcgagg gtgatggcga actccaggaa gagcgagccg gtgaggccgc
     3541 cctggaagcc gatcggggta tacaccgcgg cgagggtgat ggtcatcgcg atgacggggc
     3601 ccaccagctc gcgggcgccg ataagcgccg cctgccgccg cgatttgccc tcgcggacgt
     3661 ggcgctcgat gttctccacc accacgatgg cgtcgtccac caccagaccg accgacagca
     3721 cgatcgcgag aatcgtgagc aggttgaggc tgaagccgaa cgcgtacatc acgatggcgg
     3781 cgccgatcag cgacaccggc atggccacca gcggtaccag ggcggtgcgg agcgacccca
     3841 tgaagaggaa gacggcgaag cccacgatca gcatggtctc gcccagggtc ttggagatct
     3901 cctggatcgc gtcgcgcatg aaccgggtgc cgtcccacac cagccgcatc tcgatgtccc
     3961 gggggagcgt gggccgcagg cggtccatct ccgcgaccag ccgcttctgg acctcgatct
     4021 cgttggcccc gaccagcggc cacaccccga gatagacgcc ctcctggtcg ttgtacttgg
     4081 cgaccagggt cgcctcctcg gcgcccagct ccacccgggc cacgtcgctc agccgcacga
     4141 tggcgccctc gcgatcggcc acgatcaggt tggagaactc ctccaccgag cggaggtcgg
     4201 tgttggccag caggttgacc tgcacctggt cgcccttggt ctggcccacg gccgcgaggt
     4261 agttgttgcg ctgcagcgcg gcctgcacgt cgccgggggc caggttgagc gcggccagct
     4321 tgtccgggtc gatccagatc cgcatcgcga tcggctggcc gccctcgctg ttggtcaccc
     4381 gctgcacgcc gggaatggtg gcgagctggg gctggatcgt gcgcgagagc cagtcggtga
     4441 tctggggaac ggtccgctcc ggcgacgtga agctcaggta gaacgtcgcg tacggccggt
     4501 ccgcccgctg cacctcgatc accggcggct ccgcctcggc gggcagctcg gagcgcacct
     4561 gctggagccg cgcggtgacc tccgccagcg cctgggtgct gttgtggttc agcttcagcc
     4621 gcacggtgac ggtgctgacg ccggctcggc tggtggactc gacgtagtcc accccgccga
     4681 tggcggagac cgcccgctcg atcggcgtgg tcaggaagcc gcgcacggtc tcggcgctgg
     4741 cgccgtagta gacggtgctg atgatgaccg acgagctctc gatctgcgga tattgctgca
     4801 ccggcagacc cgtcagcgcc cgccagccca ccaggacgat gacgaggttg accaccgccg
     4861 ccaggacggg gtgccggatg aagatgtcgg tgaacgactt catgggatca ctccgctcct
     4921 tccgcaccgg cggcctgccg gctggtgtcc gcctgctggc ccgagtccgc ctgggcggcc
     4981 gggtcggcga tcgcgaccag caccgcctca cgcagcttga acgagcccga ggtggcgacc
     5041 tgctcgccgg cccggatccc atcgtagatc aggacgtcct cacccagcac cggtccgctc
     5101 cggacggtgc gcaggtgcgc gcgcagcttg ccggccgagt cgggctcgat cgcgaagacg
     5161 tgatcgccct gggggccctt gcggagcgcg ctcaccggaa cgctgacgac ggtatccagg
     5221 gcgccgacgg ggaccagcac ccgcaccgag gccccggggg cc
//
LOCUS       DASUYN010000605         5338 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1515031, whole genome shotgun sequence.
ACCESSION   DASUYN010000605 DASUYN010000000
VERSION     DASUYN010000605.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5338)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5338)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5338
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1515031"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(110..733)
                     /locus_tag="VF061_11835"
     CDS             complement(110..733)
                     /locus_tag="VF061_11835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX6670247.1"
                     /translation="MTPLRPSKIIGIGRNYVAHAKELGNPMPAVPIIFFKPPTSLIGD
                     GDTIRLPSVSRRVEFEAEIGVVIGSRAKDLSPAEAVRAIAGYTCVNDVTCRDLQKEDG
                     QWGRAKGFDTFCPVGPRVAQGLDWRDLEIIGRVNGEERQRARATDMHFPIPDLVSFLS
                     GVMTLEPGDLIATGTPAGTGPLGDGDRVEVEIPGVGVLTNPVKGDHR"
     gene            complement(730..3231)
                     /locus_tag="VF061_11840"
     CDS             complement(730..3231)
                     /locus_tag="VF061_11840"
                     /inference="COORDINATES: protein motif:HMM:NF024703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helicase C-terminal domain-containing protein"
                     /protein_id="HEX6670248.1"
                     /translation="MSERIAPGVRAYLAGEIAAAGGREVSFAAEVDRDGVVTAARVVA
                     RGTVDMVLALPGMACRGEMMLHNHPGGHLSPSQADLSVAARLHDGGIGFGIIDNGVTE
                     LYVVVEVPRVREVSRIDPFDVIDTLGERGPIAAHLGQYEDRRSQRDMAAYIADGYNDG
                     GIQLMEAGTGVGKSFAYLVPALAWARANQERTIVSTNTINLQEQLVGKDLPLLREALG
                     AGDYVPSFALLKGWRNYLCLLRLNQAVGSQRTLLEQDKVDELIGLAEWASHTGDGTLS
                     DLPVTPSPEVWDEVSAEADLCPRLKCPHFDRCFLFRARRRAAEADVVVVNHHLLAADL
                     SVRRASDNWEDAAVLPPYKRLVLDEAHHLEEVAASHLGVQVTSRSVRRLLSRFERNNR
                     GLAPTLMHELAGRSDPPSRESLEILRERLFPALGDARRASDAMFQRLSERLAAAPAGQ
                     LRLGDDFAVDPIWDEGLAFDLDASLTAFRALREAVEMIADRLAQADDTERRGRALNEL
                     GGALRRLDATSDGLNRTLRPAPGGPPTVRWMERSARGQSVQLSAVPLDLAPLLRELLF
                     DRLDTVVLTSATLAASGDFEFLESRLGLGGEGSPVTERQIFASPFDYPSQCLFGVPTD
                     LPEPREDEVGHGAAVVQIVCDLAFASDGGMFVLFTSHASLRRAAAELRMALGTRWPLL
                     VQGEGPRDVLLRRFREAENAILLGTDSFWEGVDVPGRALRALVINKLPFKVPTEPLTA
                     ARLERLAEEGQDGFVHYLLPHAALKLKQGFGRLIRSRKDLGVVVLLDSRAVTKRYGPM
                     LLGGLPRAERVVGTWTQVRTKCEDFFARHGIGAIV"
     gene            complement(3228..4520)
                     /locus_tag="VF061_11845"
     CDS             complement(3228..4520)
                     /locus_tag="VF061_11845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670249.1"
                     /translation="MRRREFVRRGVAGLAALGPGIPRLPAVGRAAPWLLVPMDDGQSD
                     HLKAYGLAFRLLERGGRAEWFLNYRGGAFLLPADGATSRDAALAGITTESLDDGRLVE
                     IRGEIGGGNMDAVPLEKAPKVAVYAPPNAAPWDDAVTMALNYAGIRFEKIWDPEVVAQ
                     GLRSYDWLHLHHEDFTGQYSKFFLNYAGAPWLVEMVEQNRSMARRLGFPSVPAEKKAV
                     AVAIAQYVERGGFLFAMCTATETLDLALAADGVDIAAAYADGSPMDPGATPAMRWERA
                     LAFQEARLELSPTMPVYSDIDGHQVNSPDRRQPLGSFTLFNFSAKIDPVATMLVQNHR
                     QVIPDFYGLTTSFTRRRIKPGVTVLAEESGAPWVKYIHGERGQGTWTFLGGHDPEDPQ
                     HQIGDAPTDLSLHPHSPGYRLILNNVLFPAAKKKELKT"
     gene            complement(4517..>5338)
                     /locus_tag="VF061_11850"
     CDS             complement(4517..>5338)
                     /locus_tag="VF061_11850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670250.1"
                     /translation="YAAAGDREAARRMLTGLADDRAAPGGVASGAAGALVTVLIGEGK
                     LEEASRRLAEQRPQMSGEEHAELIRSLVAAYIRGGRLDRAEATLGPDSTIEGFALAGR
                     IRLYHGDLKGAVEAFKHAGPYAGTRADATHRTMLLALLQPIETDSLPGLGAALLSLER
                     QDTVRAVTELERVAGDLPNAKGGAEIRLLAGRLSQARGDAELAERLYRAAASKEAPAT
                     APAAELALAEYLLESGRRDEAVAQLEHLILTYPASALVPQARRALDQARGAVPRT"
BASE COUNT          743 a         1964 c         1848 g          783 t
ORIGIN      
        1 gcgcccaggt cgatcacgtc cacccccgac tccaggagcc ggcgcttgat gctggggatc
       61 tcggcgaggg gatagcccgg cagcgacttg acgcgggcac tgatctcgat catcggtggt
      121 cgcccttcac tgggttggtg agcacgccga cgccggggat ctccacctcg acccggtcgc
      181 cgtcgccgag cggaccggtc cccgccggcg tgcccgtggc gatcaggtct ccgggctcca
      241 gcgtcatgac tccgctcagg aacgacacca gatcgggaat cggaaagtgc atgtctgtgg
      301 cgcgggcgcg ctgccgctcc tcgccgttca cccggccgat gatctcgagg tcgcgccagt
      361 ccagcccctg agccacccgg ggacccacgg ggcagaaggt gtcgaagccc tttgccctgc
      421 cccattgccc gtcctccttc tggaggtcgc ggcaggtgac gtcgttgacg caggtgtagc
      481 cggcgatggc ccggaccgcc tcggccgggc tcagatcctt ggcccgcgag ccgatcacca
      541 ccccgatctc ggcctcgaac tccactctcc gggagacgct cggcaaccgg atcgtgtcac
      601 cgtcgccgat cagggaggtg ggcggcttga agaagatgat cggcaccgcc ggcatcgggt
      661 tccccagctc cttcgcatgg gcgacgtagt tccggccgat accgatgatc ttcgaggggc
      721 gcagcggggt catacgatgg ctccgattcc atgcctcgcg aagaagtcct cgcacttggt
      781 ccgaacctgg gtccaggtgc ccaccacccg ctcggcacgc ggcagtccgc ccaggagcat
      841 cgggccgtac cgcttggtca ctgccctgct gtccagcaac accacgaccc cgaggtcctt
      901 ccggctgcgg atcaggcggc cgaacccctg cttgagcttg agcgcggcgt gggggagcag
      961 gtagtggacg aatccgtcct gtccctcctc ggcgagccgc tccagccggg ccgcggtgag
     1021 cggctcggtg ggaaccttga aaggtagctt gttgatcacc agggcgcgga gcgcgcgccc
     1081 gggcacgtcc acgccttccc agaacgagtc ggttccgagc agaatcgcat tctccgcctc
     1141 ccggaatcgc cggagcagca cgtcacgggg accctccccc tggaccagca gcggccagcg
     1201 ggtgcccagc gccattctga gctccgccgc cgcccgccgc agggaggcgt ggctggtgaa
     1261 gagcacgaac atgccgccgt ccgaggcgaa cgccaggtcg cagacgatct gcaccaccgc
     1321 cgcgccgtgc cccacctcgt cctcccgggg ctcgggcagg tcggtgggaa ccccgaacag
     1381 gcactgcgag ggatagtcga acggggaggc gaagatctgc cgctcggtca ccggcgagcc
     1441 ctcgccgccg aggccgaggc ggctctccag gaactcgaag tcgccgctcg cggccagggt
     1501 ggcgctggtg agcaccaccg tgtcgagccg gtcgaagagc agctcccgca ggagcggggc
     1561 gaggtccaga ggcaccgcgg agagctgcac gctctgccct cgcgcgctgc gctccatcca
     1621 gcgcaccgtg ggcggccctc ccggcgccgg cctgagcgtg cggttgagac catcggaagt
     1681 cgcgtccagc cgccgcagcg ccccacccag ctcgttgagc gcccggcccc gccgctcggt
     1741 gtcgtcggcc tgggccagcc ggtccgcgat catctccacg gcctcgcgca gcgcgcggaa
     1801 cgcggtgagc gatgcgtcga gatcgaaggc gagtccctcg tcccagatcg ggtcgacggc
     1861 gaagtcgtcg cccaggcgca gctgtcccgc gggcgccgcc gccagccgct cggagagccg
     1921 ctggaacatc gcgtcgctcg cccgccgggc gtcgcccagc gcggggaaga gccgctcccg
     1981 caggatctcc aggctctcgc ggctcggtgg atcgctcctg ccggccagct cgtgcatcaa
     2041 cgtcggcgca aggccgcggt tgttgcgctc gaaccgcgac agcagccggc gcaccgaccg
     2101 gctggtcacc tgcacgccga ggtggctcgc cgcgacctcc tcgagatggt gcgcctcgtc
     2161 gagaacgagt cgcttgtacg gtggcaggac cgcggcgtcc tcccagttgt ccgaggcccg
     2221 gcgcaccgag aggtccgccg ccagcaggtg atggttcacc actacgacgt cggcctccgc
     2281 cgcccggcgg cgggcccgga acaggaagca gcggtcgaag tgggggcact tgagccgggg
     2341 acagaggtcc gcctccgcgc tcacctcgtc ccagacctcc ggtgacggcg tgaccggcag
     2401 gtcgctcagc gtgccgtcac cggtgtggct cgcccactcc gccaggccga tcagctcgtc
     2461 caccttgtcc tgctccagca gggtacgctg ggagccgacc gcctggttga ggcgaagcag
     2521 gcagagatag ttccgccatc ccttgagcag ggcgaagctc ggcacatagt cgccggcccc
     2581 cagcgcctcc cgcaggagcg gcaggtcctt gcccaccagc tgctcctgga gattgatcgt
     2641 gttggtgctg acgatcgtgc gctcctggtt ggcccgcgcc caggcgaggg ccggcaccag
     2701 gtaggcgaac gacttcccga ccccggtccc cgcctccatg agctggatcc cgccgtcgtt
     2761 gtagccgtcg gcgatgtagg ccgccatgtc ccgctggctt cggcggtcct cgtactggcc
     2821 gaggtgcgcc gcgatcgggc cgcgctcgcc cagcgtgtcg atgacgtcga acgggtcgat
     2881 ccggctgacc tcgcgcaccc gcggcacctc gaccaccacg tacagctcgg tcacgccgtt
     2941 gtcgatgatg ccgaagccga tgccgccgtc gtggagccgc gcggcgacgc tcaggtccgc
     3001 ctgcgacggg gagagatggc cgcccgggtg gttgtgcagc atcatctccc cccggcacgc
     3061 catgccgggc agcgcgagca ccatgtccac cgtgccccgg gccaccaccc gcgccgcggt
     3121 caccacgccg tcccgatcga cttcggccgc gaaggacacc tcccgtcctc ccgcggcggc
     3181 gatctcgccg gcgagatagg cccggacccc cggggcgatg cgctcgctca agtcttgagc
     3241 tctttcttct tcgcggccgg gaagaggacg ttgttgagga tgaggcggta ccccggcgag
     3301 tgcgggtgca gcgagaggtc ggtgggtgca tccccgatct gatgctgcgg atcctcgggg
     3361 tcgtggccgc cgaggaaggt ccaggtgccc tggccccgct caccgtggat gtacttcacc
     3421 cagggcgcgc cggactcctc cgccagcacc gtgacaccgg gcttgatccg ccggcgcgtg
     3481 aagctggtgg tgaggccgta gaagtcgggg atgacctggc ggtggttctg gaccagcatc
     3541 gtcgccaccg gatcgatctt cgcgctgaag ttgaagaggg tgaacgatcc cagcggctgg
     3601 cgccggtcgg gggagttgac ctggtgcccg tcgatgtcgg agtagaccgg catggtcggg
     3661 ctcaactcca gtcgggcttc ctggaacgcc agcgcccgct cccaccgcat tgccggcgtc
     3721 gcccccgggt ccatcgggga cccgtcggcg taggcggccg cgatgtccac cccgtccgcc
     3781 gcgagcgcga ggtcgagcgt ctcggtcgcc gtgcacatcg cgaacaggaa tcccccgcgc
     3841 tcgacgtact gtgcgatggc cacggccacc gccttcttct ccgcgggaac cgaggggaac
     3901 cccagccgcc tggccatgga gcggttctgc tccaccatct ccaccagcca cggcgcgccg
     3961 gcgtagttga ggaagaactt cgagtactgc ccggtgaagt cctcgtggtg caggtgcagc
     4021 cagtcgtagc tccgcagtcc ctgcgccacg acctcggggt cccagatctt ttcgaaccgg
     4081 atgccggcgt agttgagcgc catggtcacg gcgtcgtccc acggcgcggc gttgggcggc
     4141 gcgtacacgg ccaccttggg cgccttctcc agcggcaccg catccatgtt ccccccgccg
     4201 atctcacccc ggatctccac cagccggcca tcgtccaacg actcggtggt gatgccggcg
     4261 agggccgcgt cccggctcgt ggccccatcg gccgggagca ggaacgcgcc gccacgatag
     4321 ttgaggaacc attccgcccg tccgccgcgc tccagcagcc gaaaggcgag gccgtaggcc
     4381 ttgaggtggt ccgactgccc gtcgtccatc ggcaccagca gccatggggc ggcccgcccg
     4441 acggcgggca gtcgggggat gccggggccg agggcggcga gtccggcgac gccgcgacgg
     4501 acgaactccc gccgcctcac gtgcggggga cggcgccgcg cgcctggtcc agggcccgcc
     4561 tggcctgggg caccagcgcg ctcgcggggt aggtgaggat gagatgctcg agctgggcca
     4621 cggcttcgtc gcgtcggccc gactcgagca gatactcggc gagcgcaagt tccgccgccg
     4681 gcgcggtggc aggcgcctcc ttcgaggccg cggcgcggta gagccgctcg gcgagctcgg
     4741 cgtcgccccg cgcttgggag agtcgccccg caaggagccg gatttcggcg ccgcccttcg
     4801 cgttcgggag atcgcccgcg acgcgctcga gctcggtcac ggctcgcacc gtgtcctgcc
     4861 gctccaggct gagcagcgcc gcgcccaggc ccgggagcga gtccgtctcg atcggctgaa
     4921 gcagggcgag cagcatcgtg cgatgggtgg cgtcggcccg ggtgccggcg tagggcccgg
     4981 cgtgcttgaa cgcttcgacg gcgcccttga gatcaccgtg atacagccgg atccgcccgg
     5041 cgagggcgaa cccttcgatc gtgctgtccg gccccagcgt cgcttcggcc cggtcgagcc
     5101 ggccgccgcg gatgtaggcg gccaccagag accggatcag ctccgcgtgc tcctcgccgc
     5161 tcatctgcgg ccgctgctcc gccagccggc ggctcgcctc ctccagcttc ccctccccga
     5221 tcagcaccgt caccagcgcg ccggccgcgc ccgaggccac cccgcccggt gcggcgcgat
     5281 cgtcggcgag ccccgtcagc atccggcgtg cggcctcgcg atcgcccgcc gcggcgta
//
LOCUS       DASUYN010000606         2587 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_189907, whole genome shotgun sequence.
ACCESSION   DASUYN010000606 DASUYN010000000
VERSION     DASUYN010000606.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2587
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_189907"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(157..1032)
                     /locus_tag="VF061_11855"
     CDS             complement(157..1032)
                     /locus_tag="VF061_11855"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX6670251.1"
                     /translation="MSMRYGISIPNFGDWADPRTMAGLARDAEAAGWDGFFLWDHIRF
                     TAAPVPVQDPWILLSAIAAQTERLILGPMVTPLPRRHPWVVARQAVSLDHLSNGRVLL
                     GVGIGEPVDLEYAAFGEDPDRKVRAEKLDEALAIIAGLWSGEEFSFSGTHYHLEPMRF
                     APLTVQQPRIPIIVAGYWPNPGPIRRAARWDGMYPLSAEPHDEDWPETFAALVPELRE
                     RHAVHAVDGMPFEILDGGETPGPYDPAVAERNGATWWIESLNPWRYGWDESERWPEIG
                     PVRDRIRSGPPRAGA"
     gene            complement(1224..2045)
                     /locus_tag="VF061_11860"
     CDS             complement(1224..2045)
                     /locus_tag="VF061_11860"
                     /inference="COORDINATES: protein motif:HMM:NF012381.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670252.1"
                     /translation="MRTDAAVSPSLASALETLRERGLGLRRGSEPEPMPERARPSVPT
                     GHPALDAALAGGRGGTGGWPRGALALLDAPAGRGASTLALGSLAAAQAAGGLTAWLDL
                     DGTLDPAVAARLGVSLDWLLVAHPRDPAEAVELAAWLGRSGLIDALVLDLGERMATAD
                     RRALDRLGALLARSGSTSVLVLAPGSREVAGAVAGVRVALHRTAWLAIGRDLVGQRVH
                     AVVERHRWALSGGSAELDLWFGEGRRIDPLVPALAEPRAWAQPLEARPALRVVSA"
     gene            2121..2196
                     /locus_tag="VF061_11865"
     tRNA            2121..2196
                     /locus_tag="VF061_11865"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2154..2156,aa:Ala,seq:cgc)
     gene            2321..>2587
                     /locus_tag="VF061_11870"
     CDS             2321..>2587
                     /locus_tag="VF061_11870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670253.1"
                     /translation="MPRSVLTLIGLLLLALVVTACGDTPPPSASPGDESPAAEESVAA
                     ESPAEESAEPTEAPPAGESRLATVQERGELICGVNGSLPGFSFLD"
BASE COUNT          370 a          962 c          928 g          327 t
ORIGIN      
        1 tcggcccgag gccggtcacg tcgacgagcg ccacgcccgc gtcgaccgcc tccacccgtg
       61 gggagaggtc gtcgagcgcg tcgagcatgc gctcgaaggg cgcgacgtcc gcctccggcg
      121 cgcgcagcgc gggccagacg agggccagga gccgggtcat gcgcccgcgc gcggcggtcc
      181 ggagcgaatg cggtcgcgga ccgggccgat ctccggccag cgctcgctct cgtcccagcc
      241 gtagcgccag gggttgaggc tctcgatcca ccacgtcgcg ccgttccgtt cggccacggc
      301 ggggtcgtac gggccgggcg tctccccgcc gtcgaggatc tcgaacggca taccgtccac
      361 cgcatgcacc gcatgccgct cgcgcagctc gggcacgagc gcggcgaacg tttccggcca
      421 gtcctcgtcg tgcggctcag cggagagcgg gtacatcccg tcccagcgcg ccgcgcggcg
      481 gatgggtccg gggttgggcc agtagccggc cacgatgatc gggatccgtg gctgctggac
      541 cgttagcggc gcgaagcgca tcggctccag gtggtagtgg gtgccgctga agctgaactc
      601 ctcgccgctc cacaggccgg cgatgatggc gagcgcctcg tccagcttct cggcgcgcac
      661 ctttcgatcg gggtcctcac cgaaggcggc gtactcgagg tcgaccggct ccccgatccc
      721 gactccgagc aggacccgcc cgttcgagag gtggtcgagc gagacggcct ggcgcgccac
      781 gacccacggg tgccggcgcg ggagtggcgt gaccatcggc cccaggatga gccgctcggt
      841 ctgcgcggcg atggcggaga gcaggatcca gggatcctgc accggcacgg gcgcggcggt
      901 gaagcggatg tggtcccaca ggaagaaacc gtcccagccc gccgcctccg cgtcacgggc
      961 cagccccgcc atggttcggg gatcggccca gtcgccgaag ttcgggatgc tgatgccgta
     1021 tctcatggac atcgttcctc ctcgtggacc gatatttcgg cgcagaagtg gccggagcgt
     1081 ctggcccggc tcggttggac cgatatttcg gtgcgggctc cgcacgaagt gcgccgtgtg
     1141 gcgcggccca cgccagaacc gggccgattc ggcgtcaccg cgcacgagct gatgaccagg
     1201 ccacgttgga ccgatgtaac gcatcaggcg ctcaccacgc gaagggcggg gcgggcctcg
     1261 agcggctgcg cccacgctcg cggctcggcg agcgccggaa ccagcgggtc gatgcggcgg
     1321 ccctcgccga accacaggtc cagctccgcg gagcccccgc tgagcgccca gcgatggcgc
     1381 tcgacgacgg catgcacccg ctggccgacg aggtcacgcc cgatcgccag ccaggcggtc
     1441 cgatgcagcg ccacccgtac cccggccacg gcccccgcca cctcgcgact gcccggcgcc
     1501 aggacgagca ccgaggtgct ccccgagcgc gccagcagcg cacccaatcg atccagcgcg
     1561 cgacggtccg cggtcgccat ccgctccccg aggtcgagca cgagggcgtc gatcagcccg
     1621 gagcgcccga gccaggctgc cagctcgacc gcctcggcgg gatcgcgcgg atgggcgacc
     1681 aggagccagt cgaggctcac tcccaggcgc gcggcgacgg ccgggtccag ggtgccgtcg
     1741 agatcgagcc aggccgtcag gccacccgcc gcctgggccg ctgccagcga gccgagcgcc
     1801 agcgtggacg cgccacgtcc cgccggggcg tccaggagcg ccagggcgcc gcgcggccag
     1861 ccaccggtgc ctccccgccc accggccagc gcggcgtcga gcgccgggtg gccggtcggg
     1921 accgatgggc gcgcccgctc cggcatcggc tccggctcgc tcccgcgacg caggccgagg
     1981 ccgcgttcgc ggagcgtctc cagggcgctg gccagggagg gcgagacggc ggcatcggtc
     2041 ctcatcggac catgcatgat agaacagatg ttctagttcg ggaagccccg aagccggctg
     2101 gtatactcgc cgacggccgt ggggatgtag ctcagctggg agagcaccgc gttcgcatcg
     2161 cgggggtcag gggttcgagt cccctcatct ccaccaccca ctcacctctc gggtcccgcg
     2221 cgcggctcga ccccgacctg ttgcgtccag cacgtacgat gatgcggcgg cccgctgggc
     2281 ccgcgcccat tgcaccggat gaacgaggga gataccatcc atgccccgat ccgtattgac
     2341 cctgatcgga ctcctcctgc tggccctggt cgtgaccgcc tgcggcgaca cgccgccacc
     2401 gtcggccagc ccaggtgacg agagccccgc cgccgaagag agcgtggccg ccgagagccc
     2461 ggccgaggag agcgccgagc ccactgaggc accgccggcc ggcgagtcgc gcctcgccac
     2521 ggtccaggag cgaggtgagt tgatctgcgg cgtcaacggc agcctgcccg gtttcagctt
     2581 cctcgac
//
LOCUS       DASUYN010000607         5219 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1515367, whole genome shotgun sequence.
ACCESSION   DASUYN010000607 DASUYN010000000
VERSION     DASUYN010000607.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5219)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5219)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5219
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1515367"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..456)
                     /locus_tag="VF061_11875"
     CDS             complement(<1..456)
                     /locus_tag="VF061_11875"
                     /inference="COORDINATES: protein motif:HMM:NF019931.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="QueG-associated DUF1730 domain-containing
                     protein"
                     /protein_id="HEX6670254.1"
                     /translation="MSLAAAVKRRADELGFVACGITDPSPVEDGGRLDGWLAGGYAGV
                     MRYLHRQARKRKDPRLILPEARSVVVVLDNYYDGEATPGPPPRVARYARGADYHRVTR
                     ERMEPLAELLRSHGARVAHTFADSGPVPERALALRAGLGWIGKNTMLIRP"
     gene            complement(453..1769)
                     /locus_tag="VF061_11880"
     CDS             complement(453..1769)
                     /locus_tag="VF061_11880"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX6670255.1"
                     /translation="MSDTRTPHVVILGGGFGGLYAAKGLADAHVRMTVVDRRNHHLFQ
                     PMLYQVATAALNPSDIASPIRSVLRKQKNTEVLLAEATEVEVEHRRVRFSDGGCLAYD
                     YLIVATGAHHSYFGHEEWEPLAPGLKSLEDALEIRRRVLLAFELAEREPDTVKRHAYL
                     TFVIVGGGPTGVETAGAVAEVRRYALRRDFRHIDPGEATVMLLEGGPRLLPSYPPELS
                     EKAKLDLRRLGVEVRTETMVTDIQPGWVRAAGWTIPTRTVIWAAGNTASGLLKSLDAP
                     LDRVGRAIVEPDCTIPNHPEVFVLGDAAAFEHQEGGPLPGICPVAIQMGQYTARTIIG
                     DLAGRPRRAFRYWDKGQLAVVGRGRAVADIWRLHFSGFLAWLTWIFVHIFFLIGFRNR
                     VLVLIQWAWSYFTYGVGARIITEEVRLPPVRPTADCPPEEVAVSSR"
     gene            complement(1766..2026)
                     /locus_tag="VF061_11885"
     CDS             complement(1766..2026)
                     /locus_tag="VF061_11885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670256.1"
                     /translation="MQTAWAPLVIRLAARAVFRPRLAADLVRTAWAFRRRGWYRQPPF
                     LPLPDPTYLRWRMYTAYAEEHAVPPAEDVVRFARWRRETMGL"
     gene            2119..2874
                     /locus_tag="VF061_11890"
     CDS             2119..2874
                     /locus_tag="VF061_11890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HEX6670257.1"
                     /translation="MTDSPYRHLDDKKLPTEDEQLLESPPPQTAAQLFLKSDSWRVLR
                     IMGEFVWGFDNLADVSDGVTIFGSARTQPDDPHYQGAVETARLLARAGIPVITGGGPG
                     IMEAANRGASEGGGLSIGCNIELPFEQGSNAYLTRSLNFKFFFVRKTMFVKYATAFIV
                     FPGGFGTLDELFEALTLIQTGKVKHFPIILFGREYWSGLTDWLAHTVAAERKINPSDL
                     HLFTVTDDPAEAAAIVIEARAEKPTEPVARVIG"
     gene            2879..4054
                     /gene="speY"
                     /locus_tag="VF061_11895"
     CDS             2879..4054
                     /gene="speY"
                     /locus_tag="VF061_11895"
                     /EC_number="2.5.1.46"
                     /inference="COORDINATES: protein motif:HMM:NF001980.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyhypusine synthase"
                     /protein_id="HEX6670258.1"
                     /translation="MTRPSAPYLRGQRIDPRAITGNESVAELVENAFLAYNAGRLREG
                     CQLFTQRMLEPDVTVGLTLTGAMTPAGLGMSCLIPLMEAGFVDWVISTGANLYHDAHF
                     ALGLAMHRGTPTADDVELRDKGVVRIYDVFFDYNVLLSTDQFVREVSARPEFQRPMSS
                     AEYHYLLGGYVREREQALGLSRRSVLAAAHELEVPLYTSSPGDSSIGMNVAEQALAGS
                     KLRFDVSADVNETAAIVLEAKRTGGRSGVLIVGGGSPKNFMLQTEPQIQEVLGIDERG
                     HDYFLQMTDARPDTGGLSGATPAEAVSWGKIDPDQLPGTVVVYGDNSIALPVLTAYAK
                     ARHADRPLKRLFGRRQAMMDRLLQEYRAALEFRDRRAEESLAHMQPGAGGAETAARR"
     gene            4051..>5219
                     /locus_tag="VF061_11900"
     CDS             4051..>5219
                     /locus_tag="VF061_11900"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX6670259.1"
                     /translation="MTREYRWYALGLLAVINLLNYIDRNVIYALFEPIKRDLSLSDTQ
                     LGWLGSAYILVFSIAALPFGVVSDLRSRRAVIAWGVTVWSAFTFLSGLVRSYWQLFTC
                     RAAVGVGEAAYGPAASSLVADFFPGPSRAMAMGILASGVSLGGVAGLLLGGHLEETYG
                     WRVAFMTVGVPGFICALLVARLVDPTRPPAKLTIRSFLRDFHIGATAVLRQLGPVIAS
                     VAIGAVLAYQLDRHYGADSRVDVAAFSAIVGLGLAINILWWVKRTPADPEEEIPFAAG
                     ISGAFADILRAGKTVLHTPTLVYVFLAGAMISFGTNGIVGWGPTFVARELELTPAEGA
                     ALLGKWGLVAGVSGTLFGGFLADGLRRRVETGRVLTIGLGLLLGGPLTVWLLTIR"
BASE COUNT          761 a         1851 c         1819 g          788 t
ORIGIN      
        1 cggccggatg agcatggtgt tcttcccgat ccagccgagg ccggcgcgca gcgccagggc
       61 gcgttcgggc accgggccgg aatcggcgaa ggtgtgcgcg acgcgggcgc catggcttcg
      121 caggagctcg gccagtggct ccatccgctc gcgcgtaact ctatggtagt cagcacctct
      181 ggcgtagcgc gcgacccggg gtggagggcc gggagtagcc tccccgtcat agtagttgtc
      241 cagcacaact actactgacc tggcctcggg aaggatgaga cgagggtcct ttcgtttgcg
      301 ggcctgacgg tggagatacc gcatcacccc ggcgtacccg ccggccagcc acccgtccag
      361 tcggcccccg tcctccaccg ggctcgggtc ggtgatgccg caggcgacga agccgagctc
      421 gtccgcccgt cgcttgaccg ctgccgccag gctcatcggg aggagacggc gacctcttcc
      481 ggcgggcagt ccgccgtggg gcggaccggg ggcagacgca cctcttcggt gatgatccgg
      541 gcgccgacgc cgtaggtgaa gtacgaccag gcccactgga tcagcaccag cacccggttg
      601 cggaagccga tcaggaagaa gatgtgaacg aagatccagg tcagccaggc gaggaacccg
      661 ctgaagtgca gccgccagat gtccgccacc gctcgcccgc gccccaccac ggcgagctgg
      721 cccttgtccc agtagcggaa tgcgcggcgc ggccgacccg cgaggtcgcc gatgatggtg
      781 cgcgcggtgt actgccccat ctggattgcg accgggcaga tgccgggcag cggcccgccc
      841 tcctgatgct cgaacgcggc cgcgtcgccc aggacgaaca cctcgggatg gttcggaatc
      901 gtgcagtcgg gctcgacgat cgccctgccc acccggtcga gcggggcgtc gagcgacttg
      961 aggagcccgc tggccgtatt gccggcggcc cagatcaccg tccgggtggg gatggtccag
     1021 cccgccgcgc gcacccagcc cggctggatg tcggtcacca tcgtctccgt ccgaacctcc
     1081 accccgaggc ggcggaggtc gagcttcgcc ttctcgctca gctccggcgg gtaggagggc
     1141 agcagccgcg gccctccctc gagcagcatg accgtggctt cgccggggtc gatgtgccgg
     1201 aagtcccgcc ggagcgcgta gcgccggacc tcggcgacgg cgcccgcggt ctccaccccg
     1261 gtcggcccgc cgcccacgat gacgaaggtg agataggcgt ggcgcttgac cgtgtccggc
     1321 tcccgctccg ccagctcgaa cgcgagcagc acgcggcgcc gaatctccag ggcgtcctcc
     1381 aggctcttga gcccgggggc gagcggctcc cactcctcgt gcccgaagta ggagtggtgc
     1441 gcgccggtgg cgacgatcag atagtcgtag gcgaggcagc cgccgtcgct gaaccgcacc
     1501 cgccggtgct ccacctccac ctccgtcgcc tccgccagga gcacctcggt gttcttctgc
     1561 ttccgcagga cggaccggat cggcgaggcg atgtcgctgg ggttgagcgc ggcggtcgcc
     1621 acctggtaga gcatcggctg gaagagatga tggttgcggc ggtccaccac cgtcatccgg
     1681 acatgcgcgt cggccagccc cttggcggcg taaagtccgc cgaagccgcc accgaggatc
     1741 accacgtggg gtgtgcgggt gtcgctcaca ggcccatcgt ctcccttctc caccgggcga
     1801 accggaccac gtcctcggcc ggcggcacgg cgtgctcttc ggcataagcg gtatacatcc
     1861 gccagcggag ataggtcggg tcggggaggg gcaggaatgg cggctgccgg taccatcccc
     1921 ggcggcggaa ggcccaggcg gtgcgcacca ggtccgccgc cagccggggc cggaacacgg
     1981 cccgggcggc gagccggatc acgagcgggg cccaggcggt ctgcatgaga gaagtatatt
     2041 ctcccccatg tccctcgtca cagcgcccgc acggcgccgc gccgcgcgtc ccccgcaccg
     2101 cattcgagcg tcccagccgt gaccgacagc ccctatcgcc acctcgacga caagaagctg
     2161 cccacggaag acgagcagct gctcgagagc ccaccgcccc agacggcggc gcagctcttc
     2221 ctgaaatcgg attcctggcg cgtgctccgg atcatgggcg agttcgtctg ggggttcgac
     2281 aacctcgccg acgtgagcga cggggtcacc atcttcggct cggcccgcac ccagccggac
     2341 gatccgcact accagggggc ggtggagacg gcccggctcc tggcacgcgc cgggatcccg
     2401 gtcatcaccg gcggcggtcc gggcatcatg gaagccgcca accgcggcgc ctcggagggt
     2461 ggcgggctgt ccatcggctg caacatcgag ctcccgttcg agcagggctc gaatgcctac
     2521 ctcacccgca gcctcaactt caagttcttc ttcgtccgga agacgatgtt cgtgaagtac
     2581 gccacggcgt tcatcgtctt ccccggcggc ttcggaaccc tggacgagct gttcgaggcc
     2641 ctgaccctga tccagaccgg caaggtcaag cacttcccca tcatcctctt cggccgggag
     2701 tactggtcgg ggctcaccga ctggctggcc cacaccgtcg ccgccgagcg gaagatcaat
     2761 ccctccgacc tccacctctt caccgtgacg gacgatccgg cggaggcggc cgccatcgtg
     2821 atcgaggctc gcgccgagaa gccgaccgag cccgtcgccc gcgtgatagg atgagcgcat
     2881 gacccgtcct tcggcaccct acctgcgcgg ccagcggatc gacccgcgcg cgatcaccgg
     2941 caacgagtcc gtcgccgagc tggtggagaa cgcctttctc gcgtacaacg ccggccggct
     3001 gcgggagggc tgccagctct tcacccagcg aatgctcgag cccgacgtca cggtgggtct
     3061 caccctgacg ggcgcgatga cccccgccgg actggggatg agctgcctca tcccgctgat
     3121 ggaggcgggg ttcgtggact gggtcatctc taccggcgcc aacctgtacc acgacgccca
     3181 cttcgcgctc ggcctcgcga tgcaccgcgg gaccccgacc gccgacgacg tggagctccg
     3241 ggacaagggg gtggtgcgga tctacgacgt cttcttcgac tacaacgtcc tgctctccac
     3301 cgaccagttc gtccgggagg tctccgcccg gcccgagttc cagcggccga tgagcagcgc
     3361 ggagtaccac tacctcctcg gcgggtacgt gcgggagcgg gagcaggcgc tgggcctgag
     3421 ccggcggtcc gtgctggcgg cggctcacga gctggaggtg ccgctctata ccagctcgcc
     3481 gggcgacagc tcgatcggga tgaacgtggc ggagcaggcg ctggccggga gcaagctccg
     3541 gttcgacgtg agcgcggacg tgaacgagac cgcggccatc gtgctggagg ccaagcgcac
     3601 cggcggcagg agcggggttc tcatcgtcgg cggcggcagc cccaagaact tcatgctcca
     3661 gaccgagccc cagatccagg aggtgctcgg catcgacgag cggggccacg actacttcct
     3721 ccagatgacc gacgcccggc ccgacaccgg aggcctctcg ggggcgacgc ccgcggaggc
     3781 ggtgagctgg ggcaagatcg atcccgacca gctgccgggg accgtcgtgg tctacggcga
     3841 caactccatc gccctccccg tgctcacggc gtatgcgaag gcgcgccatg ccgaccgtcc
     3901 gctcaagcgg ctcttcggcc gccgccaggc gatgatggac cggctgctcc aggaataccg
     3961 ggccgcgctc gagttccgcg accggcgggc ggaggagtcg ctcgcgcaca tgcagccggg
     4021 ggccggcgga gcggagacgg cggcgcggcg gtgacgcggg agtaccgctg gtatgccctc
     4081 gggctcctgg ccgtcatcaa tctgctcaac tacatcgacc ggaacgtcat ctacgcgctg
     4141 ttcgagccga tcaagcgcga cctgtcgctg agcgacaccc agctcggctg gctcggctcg
     4201 gcgtacattc tggtcttctc gatcgcggca ctcccgttcg gggtggtgag cgacctgcgg
     4261 tcccggcgag cggtcatcgc ctggggcgtg acggtgtgga gcgccttcac cttcctcagc
     4321 ggcctggtgc ggagctactg gcagctcttc acctgccgag ccgcggtcgg cgtgggcgag
     4381 gcggcctacg gtccggcggc ctcgtcgctg gtggcggact tctttcccgg gccgagccgg
     4441 gcgatggcga tggggatcct ggcctccggc gtctctctcg gcggcgtggc cggtctcctc
     4501 ctcggcgggc acctcgagga gacctacggc tggcgcgtcg ccttcatgac cgtcggggtg
     4561 cctggattca tctgcgccct cctcgtcgcg cggctggtgg atcccacccg gccgcccgcg
     4621 aagctgacga tccgctcctt cctgcgggac ttccacatcg gcgccacggc cgtgctgcgg
     4681 caactcgggc cggtgatcgc gagcgtcgcc atcggcgcgg tcctggccta ccagctcgac
     4741 cggcactacg gcgccgactc cagggtggac gtggccgcgt tcagcgccat cgtggggctc
     4801 ggcctcgcga tcaacatcct gtggtgggtc aagcggaccc ccgcggaccc ggaggaggag
     4861 atcccgttcg ccgcggggat cagcggcgcc ttcgccgaca tcctgcgggc ggggaagacg
     4921 gtgctgcaca cgcccaccct ggtgtacgtc tttctcgccg gcgccatgat ctcgttcggc
     4981 accaacggca tcgtgggctg gggcccgacc ttcgtggccc gggagctgga gctgaccccg
     5041 gccgaagggg cggcgctgct ggggaagtgg ggcctggtcg cgggagtttc ggggacgctc
     5101 ttcggaggat tcctggccga cgggctccgt cggcgggtgg agaccggccg cgtcctcacc
     5161 atcggcctcg ggctcctgct cggcggaccg ctgacggtct ggttgctgac catccgcga
//
LOCUS       DASUYN010000608         4840 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_631798, whole genome shotgun sequence.
ACCESSION   DASUYN010000608 DASUYN010000000
VERSION     DASUYN010000608.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4840)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4840)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4840
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_631798"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(98..1021)
                     /gene="fabD"
                     /locus_tag="VF061_11905"
     CDS             complement(98..1021)
                     /gene="fabD"
                     /locus_tag="VF061_11905"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: protein motif:HMM:TIGR00128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004314 - [acyl-carrier-protein]
                     S-malonyltransferase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HEX6670260.1"
                     /translation="MTVVMCPGQGAQRVGMGKDLAERYPVARDTFGAIDETLGVPLSR
                     LMWDGPEDELTLTHNAQPAILAHTTAVLAVLGERLGLMAAGAGHSLGEYSAHVAARTL
                     TAADAARLVRRRGELMLEAGRARPGAMAAVLGLDTSAVEAACNAASVDGGVAVAANLN
                     APDQTVISGDPSAVAAAGEGCRARGAKRVLPLKVSGAFHSPLMAPAVDGLREALSTVD
                     FADPAFPIIANASGSPVRTGVDAKRLLADQLTAPVRWVDCMRTAASLAPEATFVEVGP
                     GNVLAGLLKRIVPGARTVTLGTADDVEKFLA"
     gene            complement(1018..2010)
                     /locus_tag="VF061_11910"
     CDS             complement(1018..2010)
                     /locus_tag="VF061_11910"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0033818 -
                     beta-ketoacyl-acyl-carrier-protein synthase III activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HEX6670261.1"
                     /translation="MRPRPFAEVASVGTAVPARVLTNHDLTRMLDTSDEWIVERTGIR
                     ERRIAGPEQTVAMLSREASEIALQRAGVTAEELDAIVLATASPDRLLPSTACDLQALL
                     GATNAAAFDVSAACPGYLFALTVAEGLIASGQSRTALIVGAEKLSTITDFTDRSTAIL
                     FGDGAGASVVRTSTAPGRGILSTFLKSDGRLAPLLYRPGGGAADPISEKVVCERSHYM
                     KMAGREVFKAAVRAMAEACDEALTRAGITAEQVDLLIPHQANLRIIDATAKHAGIPMS
                     KVMVNLDRYGNTSSASIPLALDQAVAEGRVGPGSLILLVAFGAGFTWGSAVVRW"
     gene            complement(2007..3020)
                     /gene="plsX"
                     /locus_tag="VF061_11915"
     CDS             complement(2007..3020)
                     /gene="plsX"
                     /locus_tag="VF061_11915"
                     /EC_number="2.3.1.274"
                     /inference="COORDINATES: protein motif:HMM:TIGR00182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043811 - phosphate:acyl-[acyl carrier
                     protein] acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HEX6670262.1"
                     /translation="MIRVALDAMGGDSAPRHEIAGVVQALADLPAGFLIQLVGRASAI
                     EAELARHPGVDRSRLELREAADVIGMSEKPLQAIRKKPKSSMVVGLALQRDGLSDAFI
                     SAGNTGAMLAGSTMLFGLHDGVERATVATLFPTGSDPVLVLDGGANLDCSPRELLGFA
                     YLGTVYMRDLMGRPNPVVGLLNVGEEEEKGTKIVREAHQLLKRAPRLNYAGNIEGRDI
                     LPGPQQRIPVDVVVCDGFVGNIVLKFYESSARVFVGLLKARIPDAFDRPEMADLNRIL
                     DYSTYGGAPLLGIRGVSIVCHGASSPNAIKNAIRVAIQAASAGLSQHIGAEFALRQTA
                     APA"
     gene            complement(3023..3205)
                     /gene="rpmF"
                     /locus_tag="VF061_11920"
     CDS             complement(3023..3205)
                     /gene="rpmF"
                     /locus_tag="VF061_11920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HEX6670263.1"
                     /translation="MAVPKRRTSKMKKRLRRGHHSGAGMRTQACPRCSSPKLPHRVCD
                     SCGYYGGKKRVEVEDA"
     gene            complement(3213..3689)
                     /locus_tag="VF061_11925"
     CDS             complement(3213..3689)
                     /locus_tag="VF061_11925"
                     /inference="COORDINATES: protein motif:HMM:NF014657.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceD family protein"
                     /protein_id="HEX6670264.1"
                     /translation="MLRVDIRDLQRGPVRTQGELSPDDPTFEGLGLDLVGPVVVHGQL
                     QATGEGEYLWRGDLHGVVRGECRRCLTEVLDDVDVAVDAAVFSSDPEAVDDPDFYPLP
                     QRAGAVDVGAVVREELALAAQAHLLLCREDCAGLCPRCGTDLNAGPCACRIPAEPA"
     gene            complement(3746..4180)
                     /gene="ndk"
                     /locus_tag="VF061_11930"
     CDS             complement(3746..4180)
                     /gene="ndk"
                     /locus_tag="VF061_11930"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004550 - nucleoside diphosphate kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HEX6670265.1"
                     /translation="MASPTLTLGIVKPDGVAGGKTGKIIAHLEAAGFVLRASRLVRLT
                     DSQAGAFYEVHRGRPFYDELVRFMTSGPCLPMALEREDAVAHLRTVIGATDPAEAAAG
                     TVRKLYAESKGRNAIHASDSQDNALREVGFFFSEGELAGLWR"
     gene            complement(4228..>4840)
                     /locus_tag="VF061_11935"
     CDS             complement(4228..>4840)
                     /locus_tag="VF061_11935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HEX6670266.1"
                     /translation="CITEGIPVLHMSRTMPFVRSRGVRLIGPNCPGLITPGTRSKVGI
                     IPGNICSPGRVGLVSRSGTLTYEVVNHLTRNGIGQSTCVGIGGDPIIGTNFIDCLAAF
                     EADPETEAIVMIGEIGGTDEQNAAAFVKERVTKPVVGFIAGQTAPKGRRMGHAGAIIS
                     ASSGTAEEKLAAFEEAGIAIMRRPVDVVALLQNRGSKASKREK"
BASE COUNT          703 a         1702 c         1717 g          718 t
ORIGIN      
        1 gcgggtgctc ccggtgacga acgccgtctg gccgccgaga tcgatggtca tcggcgcccg
       61 catcctgggg ggatgtcatg gtgacgcgcg ctctcgctca tgcgaggaac ttctccacgt
      121 cgtccgcggt tcccagcgtc accgtccggg cacccggcac gatgcgcttc agcagcccgg
      181 ccagcacgtt gcccgggccg acttcgacga acgtcgcctc cggcgccagg gacgccgcgg
      241 tgcgcatgca gtccacccac cgcaccggcg ccgtcagctg atccgccagc aggcgcttcg
      301 cgtccacgcc ggtgcgcacc gggcttccac tggcgttggc gatgatcggg aaggccggat
      361 cggcgaagtc caccgtgctc agcgcttccc gcagtccgtc caccgccggc gccatcagcg
      421 gcgagtggaa tgcgccgctc accttcagcg ggagcacccg cttggcgccg cgggccctgc
      481 agccctcccc cgccgccgcc acggccgacg gatcgccgga gatcaccgtc tggtcgggcg
      541 cgttgaggtt ggccgcgacc gcgacaccgc cgtccaccga cgccgcgttg caggcggcct
      601 ccaccgccga cgtgtcgagc ccgagcaccg ccgccatggc gcccgggcgc gcccgacccg
      661 cctccaacat cagctcgccg cgccgccgga cgagtcgagc cgcgtcggcc gcggtgaggg
      721 ttcgcgccgc cacatgggcg ctgtattcgc ccaggctgtg gccggcgccg gcggccatca
      781 agccgagccg ctcgcccagg acggcgagca cggccgtggt gtgggcgagg atcgcgggct
      841 gggcgttgtg ggtgagcgtc aactcgtcct cggggccatc ccacatgagg cgggagagcg
      901 gcacgccgag ggtttcgtcg atggcgccga aggtgtcgcg ggcgacagga tagcgctcgg
      961 cgaggtcctt gcccattccg acgcgctgcg cgccctggcc ggggcacatc accaccgtca
     1021 ccaccggacg acggcgctcc cccacgtgaa cccggcgccg aacgcgacca gcaggatcag
     1081 tgagcccggg cccacccgcc cctcggccac ggcctgatcg agggccagcg ggatggaggc
     1141 ggacgaggtg ttgccgtacc ggtccagatt caccatcacc ttggacatcg ggatccccgc
     1201 gtgcttggcc gtggcgtcga tgatgcgcag gttggcctga tgcgggatga gcaggtccac
     1261 ctgctcggcg gtgatgccgg cgcgcgtgag ggcctcgtcg caggcctcgg ccatcgcccg
     1321 gacggctgcc ttgaacacct cgcggccggc catcttcatg tagtgcgacc gctcgcagac
     1381 caccttctcg ctgatgggat cggccgcgcc gccaccgggg cggtagagca gcggcgcgag
     1441 tcggccgtcg gacttgagga aggtggacag gatgccgcgg cccggcgcgg tggaggtgcg
     1501 caccaccgac gcgccggccc catcgccgaa gagaatcgcg gtggaccggt cggtgaagtc
     1561 ggtgatcgtg gagagcttct ccgccccgac gatgagggcc gtccggctct ggcccgacgc
     1621 gatcagcccc tcggccaccg tgagcgcgaa gaggtaaccc gggcaagccg cggagacgtc
     1681 gaaggccgcc gcgttggtgg cgcccagcag cgcctggagg tcgcaggcgg tggaaggcag
     1741 caatcggtcc ggactcgcgg tggcgagcac gatggcatcc agctcttccg cggtgacgcc
     1801 ggcgcgctgg agcgcgatct cgctggcctc gcggctgagc atggcgacgg tctgctccgg
     1861 gcccgcgatc cgccgctcgc ggatgccggt gcgctcgacg atccattcgt cggaggtgtc
     1921 gagcatccgg gtgaggtcgt ggttggtgag gacgcgggcc gggaccgccg tgcccacgct
     1981 ggcgacctcg gcgaagggac ggggtctcat gccggtgccg ccgtctgtcg cagggcgaac
     2041 tccgcgccga tgtgctggct caggccggcg ctggcggcct gaatggcgac gcggatcgcg
     2101 ttcttgatgg cattggggct cgaggcgccg tggcagacga tggaaacgcc cctgatcccg
     2161 aggagcggcg ccccgccgta ggtcgagtag tcgaggatgc ggttgagatc ggccatctcg
     2221 ggccggtcga acgcgtccgg gatcctggcc ttgaggaggc cgacgaacac ccgggcggag
     2281 gattcgtaga acttgagcac gatgttgccg acgaacccgt cgcacaccac gacgtccacc
     2341 gggattcgct gctgcgggcc gggcaggatg tcgcggccct cgatgttgcc ggcgtagttg
     2401 aggcgggggg cccgcttcag cagctggtgc gcctcgcgca cgatcttggt gcccttctcc
     2461 tcttcctccc ccacgttgag cagccccacc acggggttcg gccggcccat gaggtcgcgc
     2521 atgtagacgg tgcccaggta ggcgaagccg agcagctcgc ggggcgagca atcgaggttc
     2581 gcgccgccgt cgagcaccag cacgggatcg gagccggtgg gaaagagcgt ggccacggtg
     2641 gcgcgctcca cgccgtcgtg caggccgaac agcatggtgg agccggccag catggcgccg
     2701 gtattgccgg cggagatgaa ggcgtcggac aagccgtcgc gctggagcgc gaggccaacc
     2761 accatgctgg acttgggttt cttgcggatg gcctggagcg gcttctcgct catcccgatc
     2821 acgtcggccg cctcgcgaag ctccagccgg cttcggtcca cgccgggatg cctcgccagc
     2881 tccgcctcga tggcgctcgc acggccgacc agctggatca ggaacccggc gggcaggtcc
     2941 gcgagggcct ggacgacccc ggcgatctca tggcgcggag cgctgtctcc ccccatcgcg
     3001 tccagggcga cgcgaatcac gctcaggcgt cctcgacctc gacccgcttc ttgccgccgt
     3061 agtagccgca ggagtcgcag actcgatgcg gcagcttggg agagctgcag cgcggacagg
     3121 cctgcgtgcg catgccggcg ccggaatggt gcccccgccg cagtcgcttc ttcatcttcg
     3181 aggtccggcg cttcggtacg gccatgatgt cctcaagcag gttcggcggg aatgcgacag
     3241 gcgcacggcc ccgcgttcag gtcggtccca cagcgggggc agaggccggc gcagtcttcc
     3301 cggcagagca gcaggtgggc ctgcgcggcg agggccagct cctcccgcac caccgccccc
     3361 acatccacgg ccccggcccg ctggggtagc ggatagaagt cggggtcgtc caccgcctct
     3421 gggtcggagc tgaagaccgc ggcgtccacc gccacgtcca cgtcgtcgag cacctcggtg
     3481 agacagcggc gacattcgcc ccgcacaacg ccgtgcaggt cgccccgcca gagatactcc
     3541 ccttcacccg tggcctgaag ctggccatgc accacgaccg gtcccaccag atcgagcccc
     3601 agaccttcga aggtcggatc gtcgggcgac agctcgccct gggtccgaac ggggccccgc
     3661 tggaggtccc ggatatccac gcgcagcata gcccgttaac ttagctggga caatcacttg
     3721 aggcaagtcc gggggctcgg aaacgctagc gccagaggcc cgccagctcc ccctcactga
     3781 agaagaagcc gacctcgcgg agggcgttgt cctggctgtc ggaggcgtgg atcgcgttgc
     3841 ggcccttcga ctcggcatag agcttccgga cggtgccggc cgcggcttcg gcgggatcgg
     3901 tcgcgccgat gacggtgcgc aggtgcgcga ccgcgtcctc ccgctccagg gccatgggga
     3961 ggcagggccc gctggtcatg aaccggacca gctcgtcgta gaaggggcgg ccgcggtgca
     4021 cctcgtagaa cgcgccggcc tgactgtcgg tgagccgcac cagccgtgag gcgcgaagca
     4081 cgaagccggc cgcctcgagg tgggcgatga tcttcccggt cttgccgccg gcgacgccgt
     4141 cgggcttgac gatgccgagc gtgagcgtgg gtgatgccaa gccatgcctc caggtcttga
     4201 actgcgtgaa gggtcaagcg tgaccgttca cttttcacgc ttgctggcct ttgagcctcg
     4261 attctgaagc agggccacca catccaccgg tcgccgcatg atcgcgatgc ccgcctcctc
     4321 gaacgccgcg agcttctcct ccgcggtgcc cgagctggcg gagatgatgg cgccggcgtg
     4381 acccatgcgc cggcccttcg gcgccgtctg gccggcgatg aaccccacca ccggcttggt
     4441 cacgcgctcc ttgacgaagg ccgccgcgtt ctgctcatcg gtgcccccga tctcgccgat
     4501 catcacgatc gcctcggtct cgggatcggc ctcgaacgcc gcgaggcagt cgatgaagtt
     4561 ggtgccgatg atcggatcgc cgccgatgcc gacgcaggtg ctctggccga tcccgttccg
     4621 ggtgaggtgg ttcaccacct cgtaggtgag ggtgccgctg cgcgagacca gccccacccg
     4681 acccggactg cagatattgc ccgggatgat gcccaccttg ctgcgggtgc ccggcgtgat
     4741 cagcccggga cagttcggcc cgatgaggcg gacgccgcgg ctccgcacga acggcatggt
     4801 gcgactcatg tgcaggacgg ggatcccctc cgtgatgcac
//
LOCUS       DASUYN010000609         3913 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1516096, whole genome shotgun sequence.
ACCESSION   DASUYN010000609 DASUYN010000000
VERSION     DASUYN010000609.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3913)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3913)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3913
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1516096"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..996)
                     /gene="thrC"
                     /locus_tag="VF061_11940"
     CDS             complement(<1..996)
                     /gene="thrC"
                     /locus_tag="VF061_11940"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HEX6670267.1"
                     /translation="MTTALIAERETSLTELSLRPLPQACRLCGVPHPAAPAAICEECL
                     GPLEPVYDPDRPLPDAATIASRSPSLWRYREWLPFEGEPLLSLDSGFTPLVEAPELAR
                     RLGVARLWIKNDSVCHPTLSFKDRVVASAINAARAFGLETVGCASTGNLANAVAAQAA
                     RAGLAAWIFIPDDLELAKVVGTAVYNPRLVRIRGTYDDVNRLCTQAADRFGWGLVNIN
                     LRGYYGEGSKTVAFEICEQLGWRAPTAVVAPMAGGSLLTKMGKGFTEFAKAGLVAGPA
                     PRLYGAQADGCAPIVRLVESGREHVEPVVPRTIARSIAIGNPADGRFAAQAIRGSG"
     regulatory      complement(1067..1140)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00521"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="SAM riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00521"
     gene            complement(1195..2922)
                     /locus_tag="VF061_11945"
     CDS             complement(1195..2922)
                     /locus_tag="VF061_11945"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEX6670268.1"
                     /translation="MSFAHPWLLPVGFVALAALAWLVLRSERARRAALAAFGDPEVLR
                     RGSSLASPRTIARAWSLRLAALALGVVALARPQLGERESELVRTGRDVLLLLDLSRSM
                     GVTDASSGGLSQGGTRLEAAKDVAWRVVSAHPEDRVGLMVFGGSAFLQMPFTSDRASL
                     RLFLDAASLDDLGDPATDVSAALLAAVSAFEHEGEEEGRRAVLVVTDGESGEGNLEAA
                     VEALREAELPVFAVGVGTLRGGPVPADSAEAPEPYHRDHLGRVVVSRLEEGDLRTAAA
                     ATGGAYARWDRPEELEAMVAGLGPVRPRAIAARRTNESADRYQWPLALSLGLLLWAEV
                     LGMASLSFRAQRRILSTGIGMTVLLPLSSCSPAHRGERLYHQARYPEAYDVFRRGLER
                     DSSARLAFDAGAALYRLERYDEAVAAFRQAARTPALRQQSLYNLGNALVRAAEEQPGE
                     PAPLLDAVAAYEEALRLAPADAESRWNLEVALRRLGDDRTSGGSSGRGRNADYGRGDN
                     NVPGYEGNPDAAVGAMAGGGYGSAEGESAEELTADEARRLLEAVERQQLTAHEGRRSS
                     RGPTGERDW"
     gene            complement(2930..>3913)
                     /locus_tag="VF061_11950"
     CDS             complement(2930..>3913)
                     /locus_tag="VF061_11950"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEX6670269.1"
                     /translation="ADAWLLLLLAVPAALALRLILRRQEPPQERIAFPALGFLASEGT
                     PPRVRWRLLPDGLRVTALALLVLALARPQVPHDVREVKSEARNLMLALDISSSMKATD
                     FKPGNRLEVARRVLGDFARRREDDLLGLVIFAGRSFLQAPLTPDTELLGEMLKRVEIG
                     QLPDGTGIGTALALCLSQLKDLPSRASAIVLITDGANNTGSPGPFVAAEAARAIGIRI
                     HTIGVSAPDTTGFDDGFIWRQGRTPDRLTSSDERVLRRIAERSGGEYFRATDPEALER
                     VMEKLDPLERQEVTINQTRDYRELFPWLLAPALLLLAAAFALRSGRLRTLP"
BASE COUNT          569 a         1427 c         1415 g          502 t
ORIGIN      
        1 gccgctgccg cggatcgcct gcgccgcgaa gcggccgtcg gccggattgc cgatggcgat
       61 ggagcgcgcg atggtgcgag gaacgaccgg ttcgacgtgc tcccggcccg actccaccag
      121 ccgcacgatg ggggcgcagc cgtcggcctg cgcgccgtac agcctcggcg ccggcccggc
      181 caccaggccc gccttcgcga actcggtgaa gcccttgccc atcttggtca gcaacgagcc
      241 gccagccatc ggggcgacca ccgccgtggg cgcccgccag ccgagctgct cgcagatctc
      301 gaaggcgacg gtcttggatc cttcgccgta gtagccccgg aggttgatgt tgaccagccc
      361 ccagccgaag cggtccgcgg cctgggtgca gagccggttc acgtcgtcgt aggtgccgcg
      421 gatccggacc agccgcgggt tgtacaccgc ggtgcccacc accttggcga gctcgaggtc
      481 gtcggggatg aagatccagg cggcgaggcc ggcgcgcgcg gcctgggcgg cgacggcgtt
      541 ggcgaggttg ccggtggagg cgcagcccac cgtctccagc ccgaaggcgc gcgccgcatt
      601 gatcgccgac gcgacgacgc gatccttgaa cgagagggtg ggatggcaga cgctgtcgtt
      661 cttgatccag agccgcgcga caccgagccg gcgggcgagc tcgggcgcct cgaccagcgg
      721 ggtgaagccg ctgtccagcg agaggagggg ctcgccctcg aaggggagcc actcgcgata
      781 gcgccagagc gacggggagc gggaggcgat ggtagccgcg tccggcagcg gacgatcggg
      841 atcgtacacc ggctccagcg ggcccagaca ctcctcgcag atcgcggccg gggcggcggg
      901 gtgtgggacc ccgcagagcc gacacgcctg cggcagcggt cgcagcgaca gctcggtcag
      961 ggaggtctcg cgttcggcga tcagggcggt cgtcatcaca ttcctccgcc tcactgcccc
     1021 gatcgccggc accggctgca acgaaaaagc gcccggtgcc aaaaagcacg cgggacgcga
     1081 ggctttttag catttgttta acgtggctgc aatacgccgc aaatgaccac gagcttcggt
     1141 tgtctccgct acgttacgcc attgccgacc cgggcgcaag agggacggca gggatcacca
     1201 atccctttcc cccgtcggtc cccggctgct ccgccgcccc tcgtgcgcgg tgagctgctg
     1261 ccgctccacc gcctccagca gccggcgcgc ttcgtccgcg gtcagctcct ccgccgattc
     1321 gccttccgcc gacccgtagc caccgcccgc catggcccct accgcggcgt cgggatttcc
     1381 ctcatagccc ggcacgttgt tgtcgccccg gccatagtcc gcgttgcggc cgcggccgga
     1441 ggagccaccg ctggtgcggt cgtcgcccag ccgccggagc gcgacttcga ggttccaccg
     1501 ggattcggca tccgccggcg ccagccggag cgcctcctcg taggccgcca ccgcatcgag
     1561 caggggcgcg ggctcccccg gctgctcctc ggcggcgcgg acgagggcat tgccaagatt
     1621 gtagaggctc tgctgccgca gcgccggcgt ccgcgccgcc tggcggaacg ccgccaccgc
     1681 ctcgtcgtag cgttccagcc ggtagagcgc ggcgccggcg tcgaacgcca gccgggcgct
     1741 gctgtcccgc tcgaggccgc ggcgaaagac gtcgtaggcc tccgggtacc tggcctggtg
     1801 atagagccgc tcgccgcggt gggcggggga gcaggaggag aggggaagga ggaccgtcat
     1861 cccgatgccg gtcgagagga tccttcgctg cgcccggaat gacaggctgg ccattccgag
     1921 cacctcggcc cagaggagca ggcccagcga cagggcgagc ggccactgat accgatccgc
     1981 cgactcgttc gtcctcctcg ccgcgatcgc ccgcggccgc accgggccca accccgccac
     2041 catcgcttcc agctcctccg gccggtccca gcgcgcgtat gccccgccgg tcgcggcggc
     2101 ggcggtgcgg aggtcgccct cctccagccg cgacaccacc acccgcccga gatggtctcg
     2161 atggtacggc tccggcgcct ccgcgctgtc ggccggcact ggcccacccc ggagggtgcc
     2221 gacgccgacg gcgaacacgg gaagctccgc ctcccgcagc gcctccaccg ccgcctccag
     2281 gttgccttcg ccgctctcgc cgtcggtgac gacgagaacc gcgcgccggc cctcctcctc
     2341 cccctcgtgc tcgaaggcgc tcacggccgc caggagcgcg gcggagacgt cggtcgccgg
     2401 atcgccgaga tcgtccaggc tcgcggcgtc gaggaagagc cgcagcgagg cgcgatccga
     2461 agtgaagggc atctgcagga acgcgctgcc accgaagacc atcagcccca cgcggtcctc
     2521 ggggtgagcg gagaccaccc gccaggccac gtctttcgcg gcctcgagtc gggttccccc
     2581 ctgggagagg cctccgctcg aggcatcggt gacgcccatc gagcgggaga gatcgagcag
     2641 caggagcacg tcgcggccgg tgcgtaccag ctcgctctcc cgctcgccca gctggggacg
     2701 ggccagcgcc acgaccccca gcgcgagggc ggcgagccgg agcgaccatg ccctggcgat
     2761 ggtacgcggg ctcgcgagcg aggagcctcg gcgcagcacc tcggggtcgc cgaaggcggc
     2821 cagtgcggca cggcgcgcac gctccgagcg aagcacgagc caggccagcg ccgccagggc
     2881 gacgaagccc accggaagga gccagggatg ggcgaagctc atcgcgcggt cagggcaagg
     2941 tcctcagccg cccgctgcgg agcgcgaagg cggcggcgag gagcaggagc gcgggcgcga
     3001 gcagccaggg gaagagctcg cggtagtcgc gcgtctgatt gatggtgact tcctgccgct
     3061 ccagcgggtc gagcttctcc atgacgcgct cgagcgcctc gggatcggtg gcacggaagt
     3121 attcgccccc gcttcgctcc gcgatccgcc gcagcacccg ctcgtccgag ctcgtgagcc
     3181 ggtccggcgt gcgcccctgc cgccagatga acccgtcgtc gaagccggtc gtgtcgggcg
     3241 cgctcacgcc gatggtgtgg atccggatgc cgatcgcgcg ggccgcctcc gccgccacga
     3301 acgggcccgg agagccggtg ttgttggcgc cgtccgtgat cagcacgatc gcgctggccc
     3361 ggctggggag gtccttgagc tggctgagac agagcgccag cgccgtgccg atgccggtgc
     3421 cgtccgggag ctgcccgatc tcgacccgtt tcagcatctc gccgagcagc tcggtgtcgg
     3481 gcgtgagcgg cgcctgaagg aaggagcggc cggcgaagat cacgaggccg agcaggtcat
     3541 cctcgcgccg gcgggcgaag tctcccagga cccggcgagc gacttccagc cggttccccg
     3601 gcttgaagtc ggtcgccttc atgctgctgg agatgtccag cgccagcatc aggttccggg
     3661 cctcgctctt cacctcgcgc acgtcgtgcg ggacctgcgg ccgcgccagc gcgaggacca
     3721 gaagcgcgag ggccgtgacg cggagcccat cgggcaggag ccgccagcgg acgcggggcg
     3781 gcgtcccctc ggaggcgaga aagccaagcg ccgggaaggc gatccgctcc tgcggcggct
     3841 cctgccggcg aaggatcagc cggagcgcca gcgccgccgg gaccgcgagg aggaggagga
     3901 gccaggcgtc agc
//
LOCUS       DASUYN010000610         2020 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1295769, whole genome shotgun sequence.
ACCESSION   DASUYN010000610 DASUYN010000000
VERSION     DASUYN010000610.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2020
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1295769"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            342..707
                     /locus_tag="VF061_11955"
     CDS             342..707
                     /locus_tag="VF061_11955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670270.1"
                     /translation="MAKKPTKGKSSGDEGPTAGGAEELPERWSAQRKMELVLRLLRGE
                     PLDGVSRESQVPAHELESWKRVFLEAGARGLKIRSDPEERELTMARAKVGELTMRLEL
                     AEYLIEKRGFADEWKRSRR"
     gene            704..1588
                     /locus_tag="VF061_11960"
     CDS             704..1588
                     /locus_tag="VF061_11960"
                     /inference="COORDINATES: protein motif:HMM:NF033516.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HEX6670271.1"
                     /translation="MRGQGSPSTARRYPLTVVCQVFRVPRSSVYSAQAPMPAGPPGKR
                     GPKTRWSDTEIVAGIRAILAASPFHGEGYRKIRARLAHRGLAVSGKRVLRLMRQHSLL
                     APRRLGPPNGDPAHAGRIITDRPDVMWGTDATRFYTEQEGWCWFFGAIDHGIDELLGW
                     HVAKLGDRWAALEPIRQGVRHAFGAFRKDVARGLAVRCDWGPQYIADAWIQEVKWLGI
                     TISPSYVGEPECNGVIERFMRTLKEQCLYLHRFQTLEEARGVIAEFIDRYNHEWLIER
                     LGHRTPAQARAQGWRAAA"
BASE COUNT          334 a          658 c          720 g          308 t
ORIGIN      
        1 cacgcatagg gcgccataca tttccctcgg tgcctccacc gcggtcttcg gtgcactcgg
       61 gattctggcg gtgctgcagt ttgtcgcgcg ccggcagcgc ccaacagcgg gacgtcgcgc
      121 ctgggtcgtc atcgccgcca ccctggcgct catcgggacc cttgggaccg gcccgcagtc
      181 tgacatactc gcccatctct tcggcctgct ggtcggcgcc gccctcggaa tcggcccagc
      241 acttgcgctg cgccggccac tcagcagact tatatcggac ccgatttcct tggacaccgt
      301 cctgactaat ggtgggatgg ggatgaacca aggaggtggg gatggccaag aagccaacga
      361 agggcaagag cagtggggat gagggtccga cggcgggtgg cgcggaggag ctgccggagc
      421 ggtggagcgc ccagcggaag atggagttgg tcctgcgcct gctccgaggc gagccgctgg
      481 acggcgtgtc ccgcgagagc caagtgcccg cgcatgagct ggagagctgg aagcgcgtgt
      541 ttctcgaggc cggcgcccgc gggctcaaga tccggagcga ccccgaggag cgcgagctca
      601 ccatggcgcg cgccaaggtc ggcgagttga ccatgcggct ggagctcgcc gagtacctca
      661 tcgaaaaaag gggcttcgcg gacgagtgga agaggtccag gcggtgagag gccagggcag
      721 cccgagcacg gcgcggcggt atccgctgac cgtggtctgt caggtgttcc gcgttccgcg
      781 ctcgagcgtg tactcggccc aggcgccgat gccggcgggg ccgcccggga agcgagggcc
      841 gaagacccgg tggagcgaca ccgaaatcgt ggcgggaatc cgggcgatcc tcgccgcgag
      901 ccccttccac ggggagggct accggaagat ccgcgcccgc ctcgcccatc ggggactcgc
      961 ggtcagtggc aagcgagtcc tgcggctcat gcgccagcac agcctcctgg cgccgcggcg
     1021 gctcggccct ccgaacggcg accccgccca cgctgggcgg atcatcaccg atcggccgga
     1081 cgtgatgtgg ggcaccgacg ccacgcgctt ctacaccgag caggagggct ggtgctggtt
     1141 cttcggggcc atcgaccacg ggatcgatga gctcctgggc tggcacgtgg ccaagctggg
     1201 cgatcgctgg gcagcgctgg agccgattcg ccaaggtgtc cgccacgcgt tcggggcctt
     1261 ccggaaggac gtcgcccgcg ggctcgcggt ccggtgtgac tggggcccgc agtacatcgc
     1321 agacgcatgg atccaggaag tgaagtggct ggggatcacg atctcaccct cgtatgtggg
     1381 cgagcccgag tgcaacggcg tcatcgagcg cttcatgcgg acgctgaagg agcagtgcct
     1441 ctacctccac cgcttccaga cgctggagga ggcgcggggc gtgatcgccg agttcatcga
     1501 tcgctacaac cacgagtggc tgatcgagcg tctcgggcat cgaacgccgg cgcaggcccg
     1561 ggcgcagggc tggagggccg ccgcatgagt cggccgacca gactggccag gcgatcgagg
     1621 gccgcagagg ctccaggatc gattctgagg agggggccgc tatctcggta ttcccgaaac
     1681 ggggtggcct tcacggctca cgagtgtcca aggaaccggg tgcggtacac tgccgcgcaa
     1741 cggcgatgcc gctcgcatcc agtggttcga agcgccgcgc tgcttcgcct ttcacttcgc
     1801 caacgcctac gacgacggtg atctcaccat catcgacctg ccgaagcatc cgcggatgtt
     1861 tctcacggat cagaacggcc ccaacgaggg tgcacccatc ctggtgcgat ggacgctcca
     1921 tcgcccgtcc gggcgattga ccgaaaccgt cctggacgac cgcggcaacg agttcccgcg
     1981 gatcgatggg cgtcgcggtg ggcaagccta tcgctacgtc
//
LOCUS       DASUYN010000611         4389 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_414816, whole genome shotgun sequence.
ACCESSION   DASUYN010000611 DASUYN010000000
VERSION     DASUYN010000611.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4389)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4389)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4389
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_414816"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..651)
                     /locus_tag="VF061_11965"
     CDS             complement(<1..651)
                     /locus_tag="VF061_11965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670272.1"
                     /translation="MRQHTTALVSLVAGTVLFATACSDTTPPTSPSDQPTDQAGFDAL
                     QQADDPGALVRDVPGFGGFFFDAEGVPTVYLQDVTTRAAAERALGPWLGVRGLRAAAL
                     RVRRADFAWASLERWQGQASAGALAMPGAVWVDADEVRNRVTIGVERGASTAQVRSAV
                     ARLGVPDAAVVVQEVEPVRLAVTLRQRVRPVVGGLQINFPGFLCTLGFNAMRSGQRS"
     gene            836..2605
                     /locus_tag="VF061_11970"
     CDS             836..2605
                     /locus_tag="VF061_11970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670273.1"
                     /translation="MTRSPARSAARLLPLGLMLACEGEPTTPSALGVGPEVVAPVTDN
                     RLATLRVSPDSQMVFAGDVFRVVALPRNRAGELLERSITWTVGNTKVIRILGTTEADM
                     PFRALKAGRTSARASTDGKTRTSIVVVRGVSGAKVVVTPSEVTIESGGSAGFSAQGLT
                     ALDEPAGVNVTWTTDAGSISADGVLAATAPPGSYRVIATSLFGAADTAAVTIAGGEPP
                     MIERVSLVPAVAASRPGEVTRFQATVWNTAGAQVAEPVAYAATCGSVTATGAFTAPGG
                     GGTCLLTASAGDKADTTEVLLLRNTLEQGIPFGSYNMWPTPTRTQSSGVAAFTGSHDY
                     VPPGEMVAHLDAARVRGMSIVLAMTGGSHDRYKTDGVFDQGKWEAAMDGYDTPAIRDA
                     IAAAVADGTVIGNSVMDEPQQSGTTSKDWGPPGTMTKSRVDQLCGYVKAIFPTLPVGV
                     GHDHNAFEPSNTYAVCEFLMPQYAARKGSVTVWRDGALAMAQRDGLAIVFSMNLLNGG
                     VQDKTGAWDCPGTGGLGDRSPNCRMTAAQVRDFGLALGTAGCAMLTWKYDSEFVARPD
                     NQEAFSTIAVALAALPRPRCAVR"
     gene            complement(2690..>4389)
                     /locus_tag="VF061_11975"
     CDS             complement(2690..>4389)
                     /locus_tag="VF061_11975"
                     /inference="COORDINATES: protein motif:HMM:NF026092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycogen debranching N-terminal
                     domain-containing protein"
                     /protein_id="HEX6670274.1"
                     /translation="GQYFAPGVEDDCLTFAYRGRDGRVLRSVVRFRDPPPPGGLTEHA
                     ARWELRLQPEQRVELEWEVRTQEGERRVVALRGLEDARAQLDGVYQDWQQQGSRWTTD
                     AGDLDHLLRRATDDLRALQVEMDGGPVISAGIPWYSTVFGRDAIITSLQALPLNPELA
                     RRTLRYLASRQGEREDGYTEEQPGRILHELRRGEMARTGEIPHVPYYGSVDATPLWLI
                     LLHETWRWTGDAELSRQLLPNAERALAWIDRYGDLDGDGFVEYARTSEKGLVNQGWKD
                     SGDGVPFPDGRLPEPPIALVEVQGYVYDAKLRMAEMYQYLGHAERGDTLRREAAEMRR
                     RIRDAFWLEELGTFALALDREKRPLPTATTNAGHLLWSRVPAPEEARRLAERFLEPDF
                     FSGWGIRTLSAAHPVFNPMSYHNGSIWPHDNAIVVLGMALQGHARSALPVVRAIYEAA
                     IHTEFQRLPELYCGMARGRGHRPVAYPVSCSPQAWASGSLFMLLQAMLGIYAEAPAQV
                     LHVRDPVLPDFLNELTVTGLPIGGTRVSLQFRRHGSRTLANLLSLEGDRLQVRIELS"
BASE COUNT          636 a         1594 c         1562 g          597 t
ORIGIN      
        1 cgagcgctgg ccgctccgca tcgcgttgaa tccgagggtg cagagaaaac ccgggaagtt
       61 gatctgcagg ccgcccacca cgggtcgtac gcgctggcgc agcgtcacgg ccagtcttac
      121 cggctccact tcctgcacca cgaccgccgc atccgggacg ccgagacggg ccacggcgga
      181 ccgcacctgc gccgtggacg ctccgcgctc caccccgatc gtcacccggt ttctcacctc
      241 gtccgcatcc acccagaccg cacctggcat cgccagggcc ccagcgcttg cctggccctg
      301 ccagcgctcc agcgaagccc aggcgaaatc ggcccggcgc acgcgcagcg cggccgcccg
      361 caagccgcgc acgccgagcc acgggccgag cgcccgctcg gcggcggcgc gcgtggtcac
      421 gtcctggagg tagaccgtcg ggacgccttc ggcatcgaag aagaagccgc cgaagccggg
      481 gacgtcgcgg acgagcgccc cgggatcatc ggcctgctgc agggcatcga atcccgcctg
      541 gtcggtgggc tgatcggatg gagaggtggg cggcgtggtg tcggagcagg cggtggcgaa
      601 gagaaccgtt ccggcgacca ggctcacgag agcggtcgtg tgctggcgca tggggttgcc
      661 tcgaagggtg ggatgcccgg tgttgcgggg ccggggggcc gcgcctgcaa tgtcgccagg
      721 gggaacgggc cggcgccagg gtgagcgcgc ccgactggtc gtcgtctctt ccctccgccg
      781 gagccggacc gcatcttatc ccgatccgac actctttccc ctcgccagat cccacatgac
      841 acggtcgcct gcgcggtccg ctgcccgcct gctgcccctg ggcctgatgc tcgcctgcga
      901 gggcgagccg acgacaccgt ccgcgctcgg cgtcggaccg gaggtcgtcg ccccggtaac
      961 cgacaaccgg ctggccacgc tgagagtgag ccccgattcc cagatggtgt tcgccggaga
     1021 cgtcttccgg gtcgtggcat tgccgaggaa ccgggcgggc gagctgctgg agcgcagcat
     1081 cacctggacc gtcggcaaca ccaaggtgat ccggatcctg ggcacgaccg aggcggacat
     1141 gccgttccgc gcgctcaagg ccggccggac cagcgcgagg gcctccaccg acggcaagac
     1201 gcggacctcc atcgtcgtgg tccgcggggt gtccggcgcg aaggtcgtgg tgacgccgtc
     1261 cgaggtcacc atcgagagcg ggggcagcgc cgggttcagc gcgcagggcc tgaccgcact
     1321 cgacgagccg gcgggcgtca acgtcacctg gaccacggac gcgggcagca tctcggcgga
     1381 cggcgtcctc gccgccacgg cgccgccggg gtcctaccgg gtgatcgcca cctctctctt
     1441 cggcgcggcc gacaccgccg cggtcaccat cgccggcggc gagccgccga tgatcgagcg
     1501 cgtgagcctg gtccccgcgg tcgccgccag ccggcccggc gaagtcaccc ggttccaggc
     1561 caccgtgtgg aacacggcgg gcgcgcaggt ggcggagccg gtcgcctacg cagcgacctg
     1621 cggcagcgtc accgcgaccg gtgccttcac cgcgccgggc ggtggcggca cctgtctcct
     1681 cacggccagc gcgggcgaca aggcggacac caccgaggta ctgctgctcc ggaacacgct
     1741 ggagcagggc attcccttcg gcagctacaa catgtggccc acgccgacga ggacgcagtc
     1801 gtccggcgtc gcggccttca ccggcagcca cgactacgtt ccgccgggcg agatggtcgc
     1861 ccacctggac gcggcccggg tgcggggcat gagcatcgtg ctcgcgatga ccggcgggtc
     1921 ccacgaccgc tacaagacgg acggcgtgtt cgaccaggga aagtgggagg cggcgatgga
     1981 cggatacgac acgccggcga tccgggacgc gatcgccgcg gccgtggccg acggcaccgt
     2041 catcgggaac tcggtcatgg acgaaccgca gcagtcgggc accacctcca aggactgggg
     2101 gccgccgggc acgatgacga agagccgggt ggaccagttg tgcggctacg tgaaggccat
     2161 cttcccgacg ctgccggtgg gcgtggggca cgaccacaac gccttcgagc cgtcgaacac
     2221 ctacgccgtg tgcgagttcc tcatgccgca gtacgccgcc cgcaagggct cggtcaccgt
     2281 gtggcgcgac ggcgcgctcg ccatggcgca gcgggacggg ctcgcgatcg tgttcagcat
     2341 gaacctcctg aacggcggag tgcaggacaa gaccggcgcc tgggactgcc ccggcaccgg
     2401 cgggctgggc gaccggtcgc ccaactgccg gatgaccgcg gcccaggtgc gcgacttcgg
     2461 actcgcgctc ggcaccgccg gctgcgccat gctgacctgg aaatacgaca gcgagttcgt
     2521 ggccagaccg gacaaccagg aggcgttctc gaccatcgcg gtggccctcg cggcgcttcc
     2581 ccggccccgg tgcgcggtac gatgagtcgg cgcctgcgcg cgcccgcctc gccgctccgc
     2641 ttcctctgcg accctatcgg cgggcaaggg cttccggtgg ctgagcggct cagctcagct
     2701 cgatccgcac ctggaggcgg tcgccctcga ggctgagcag gttcgccagc gttcggctcc
     2761 cgtgccggcg gaactggagc gacacgcggg tgccgccgat cggcagcccc gtcacggtga
     2821 gctcgttcag aaagtcgggc aggaccgggt cgcggacgtg gagtacctgg gccggagcct
     2881 cggcgtagat ccccagcatc gcctgcagca gcatgaagag cgagcccgag gcccacgcct
     2941 ggggcgagca gctcaccggg taggccaccg gccggtgacc tctgcctctc gccatcccgc
     3001 agtacagctc cggcagccgc tggaactcgg tgtgaatcgc cgcctcgtag atcgcccgca
     3061 ccacggggag ggcgctccgg gcgtgaccct gcagcgccat gccgagcacg acgatggcgt
     3121 tgtcgtgggg ccagatggac ccgttgtgat agctcatggg gttgaagacc gggtgcgcgg
     3181 cgctcagcgt ccggatgccc cagccggaga agaagtccgg ctccaggaag cgctccgcca
     3241 ggcgacgcgc ctcctccggt gccggcaccc ggctccagag caggtggccg gcgttggtgg
     3301 tcgccgtcgg caacggccgc ttctcccggt cgagggccag cgcgaacgtg ccgagctctt
     3361 ccagccagaa cgcgtcgcga atccgccggc gcatctcggc cgcctcgcgc cggagcgtgt
     3421 ctccccgctc ggcgtggccg aggtactggt acatctccgc catccggagc ttggcgtcgt
     3481 acacgtagcc ctggacttcg accagcgcga tcggcggctc gggcagccgg ccgtcgggga
     3541 aggggacgcc gtcgcccgag tccttccagc cctggttcac cagccccttc tccgaggtgc
     3601 gggcgtactc cacgaacccg tcgccgtcga gatcgccgta ccggtcgatc cacgccagcg
     3661 cgcgctccgc gttcggcagc agctggcggc tcagctccgc gtcaccggtc cagcgccagg
     3721 tctcgtgcag caggatgagc cagagcggcg tggcgtccac actgccgtag taggggacgt
     3781 ggggaatctc gccggtgcgc gccatctcgc cccgccggag ctcgtgcagg atcctgcccg
     3841 gctgctcctc ggtgtatcca tcctcgcgct cgccctgccg gctcgcgaga tagcgcaggg
     3901 tgcgccgcgc cagctccggg ttgagcggca gcgcctggag cgaggtgatg atggcgtcgc
     3961 gcccgaagac ggtggagtac cacggaattc ccgccgagat caccggtccg ccgtccatct
     4021 cgacctgaag cgcccggaga tcgtcggtcg cccggcggag caagtggtcg aggtcgcccg
     4081 catcggtggt ccagcggctc ccctgctgct gccagtcctg gtagacgcca tcgagctggg
     4141 cgcgggcgtc ctccaggccg cggagggcga cgacgcgacg ctctccctcc tgagttcgga
     4201 cctcccactc gagctccacc cgctgctccg gctgcagccg cagctcccag cgagccgcat
     4261 gctcggtgag tccgcccggc ggtggggggt cgcggaagcg gaccacgctg cgcagcaccc
     4321 gcccgtcccg gccccggtag gcgaaggtga ggcagtcgtc ctcgaccccc ggggcgaagt
     4381 actgtcccc
//
LOCUS       DASUYN010000612         3200 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1297316, whole genome shotgun sequence.
ACCESSION   DASUYN010000612 DASUYN010000000
VERSION     DASUYN010000612.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3200)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3200)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3200
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1297316"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..580
                     /locus_tag="VF061_11980"
     CDS             <1..580
                     /locus_tag="VF061_11980"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX6670275.1"
                     /translation="ASPPPPRPRPVEGPNAFVDLGSMILDESSPRDTRMRIDRADPKE
                     QDEQREFQEILEQFKRGIEENLDSEDYEAHYDLGVAFKEMGLLDEAIAEFQKALRSPE
                     GRLRTSEALGICFYEKGQFGIAETVLRRAVETVDGGDEAKIGLLYWLGRAAEAQGKEM
                     EAITSYERALAVDIRFMDLSDRMHRLAADRHK"
     gene            577..1566
                     /locus_tag="VF061_11985"
     CDS             577..1566
                     /locus_tag="VF061_11985"
                     /inference="COORDINATES: protein motif:HMM:NF012568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HEX6670276.1"
                     /translation="MNPQTAPLSLAEIQRPLRARLEKVQQELRRVVEADFGLITEVNS
                     HLFRMQGKLFRPTLLLLADEATGGPDPKATTLAAVVELIHLATLVHDDSVDHSVLRRG
                     MPTINALFSHQISVIMGDYLYSRAVIELVGLGDLEPLQVLSRVTNEMTVGEMRQLLAH
                     DPLQYSEEDYDLLIQSKTASLVSGACEVGALRAAPAERLALRRFGEALGMAFQIVDDL
                     LDYIGDPSVTGKPTGSDLREHKVTLPLIAALPRMGESDRRQVADLLLTPEPTDAQIQA
                     VVEAVSEAGGLDYARERALRLAEQADGELDRLPASPARDALRASIAYVLDRRR"
     gene            1566..1838
                     /locus_tag="VF061_11990"
     CDS             1566..1838
                     /locus_tag="VF061_11990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4321 domain-containing protein"
                     /protein_id="HEX6670277.1"
                     /translation="MASGPHRPGFYLGVLVAGFVAGGALTALLRQTLPESAARTFFTT
                     TWEAQFGPVSADLLVISFTLGPIALHVSLLSLIAVVLAYLIARSLF"
     gene            1848..2102
                     /gene="tatA"
                     /locus_tag="VF061_11995"
     CDS             1848..2102
                     /gene="tatA"
                     /locus_tag="VF061_11995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000492443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HEX6670278.1"
                     /translation="MGNLGFTEIMIILLVVLLLFGAKRLPEVGSSIGKGIREFKRSLS
                     DTQEAIMGNEEPRSTLPPRQPEDPVQGTKPTGEPKRLSQQ"
     gene            complement(2109..>3200)
                     /locus_tag="VF061_12000"
     CDS             complement(2109..>3200)
                     /locus_tag="VF061_12000"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF024545.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEX6670279.1"
                     /translation="DASDTAAARARADSARAAILGGEPFADVARRESADSASAANGGE
                     LPEWTKGNMDPAFDSAAFALPLKRVSEPVLSQFGFHVIEMTSRKGDKAKGRHILIPIE
                     VTGEHRDRLDARADSLERIAAERDDPAALDTVSKALSLPIGRTGGVQEGTRVQIGNLV
                     VPDAGAWAFSGAEPGATSPVIESSFAYYVFRLDSAQAAGVPPLAQIRPGVEHALRTEK
                     KKALAKPKAEEYLKRLEQGETMPGAAKVMSLPHQEFGPFTRVNPPLTDPMVVGTAFGL
                     EKGQRSGLLDTPDGLYVMESLERTPADSTKFAKELDEYRARMIDLARQARIRGYMAAL
                     RESARIVDNRAKLRQQQQQAAETPLPPIT"
BASE COUNT          463 a         1148 c         1107 g          482 t
ORIGIN      
        1 ggcctccccc ccgccgccgc gcccgcggcc ggtcgaaggg ccgaacgcgt tcgtggatct
       61 gggttcgatg atcctcgacg agagctcccc gcgggacacc cgcatgcgca tcgaccgagc
      121 cgaccccaag gagcaggacg agcagcggga gttccaggag atcctggagc agttcaagcg
      181 cgggatcgag gagaacctcg acagcgagga ctacgaggcg cattacgacc tcggcgtcgc
      241 cttcaaggag atgggtctcc tggacgaggc gatcgcggag ttccagaagg cgctccgctc
      301 acccgaggga cggctccgca cctcggaggc gctgggcatc tgtttctacg agaaggggca
      361 gttcggcatc gcggagacgg tcctgcggcg cgcggtggag acggtggacg ggggagacga
      421 agcgaagatc ggcctgctgt actggctggg ccgggccgcg gaggcgcagg gcaaggagat
      481 ggaggcgatc accagctacg agcgggccct cgccgtggac atccggttca tggatctgag
      541 cgaccgcatg caccgactcg ccgcggaccg gcacaagtga atccccagac cgcacccctc
      601 tccctggccg agatccagcg gccgctgcgc gcccggctgg agaaggtcca gcaggagctg
      661 cgccgggtgg tcgaggccga cttcgggctg atcaccgagg tcaattccca cctgttccgg
      721 atgcagggca agctgttccg gcccacgctc ctcctgctgg cggacgaggc gaccgggggg
      781 cccgacccca aagccaccac cctcgccgcg gtggtggagc tgatccacct cgccaccctg
      841 gtgcacgacg actcggtgga ccactcggtg ctccgtcgcg gcatgccgac gatcaacgcg
      901 ctcttcagtc accagatctc ggtgatcatg ggcgactacc tctactcgcg ggccgtgatc
      961 gagctggtgg gcctgggcga cctcgagccg ctccaggtgc tgagccgggt caccaacgag
     1021 atgacggtgg gcgagatgcg gcagcttctg gcccacgatc cgctccagta ctcggaagag
     1081 gactacgacc tcctcatcca gtcgaagacg gcctccctgg tctcgggcgc gtgcgaggtg
     1141 ggggcgctcc gggcggcccc ggcggagcgg ctggccctgc gccggttcgg agaggccctg
     1201 gggatggcat tccagatcgt ggacgacctg ctcgactaca tcggcgaccc gagcgtcacc
     1261 ggaaagccca ccggctccga cctgcgggag cacaaggtga ccctgccgct gatcgcggcg
     1321 ctgccccgca tgggcgagtc ggaccgccgt caggtggccg acctcctgct cacgcccgag
     1381 cccaccgatg cccagatcca ggcggtggtg gaagcggtgt ccgaggccgg cggcctggac
     1441 tacgcgcggg agcgcgccct ccggctggcc gagcaggccg acggcgagct cgaccggctg
     1501 ccggcctcgc ccgcgcggga cgccctccgc gccagcatcg cgtatgtgct ggaccgcagg
     1561 cgctgatggc gagcggaccg caccggcccg gcttctacct cggcgtcctc gtcgccggct
     1621 tcgtcgccgg gggggcgctg accgcgctgc tgcggcagac cctccccgag agcgcggcgc
     1681 gaaccttctt caccacgacc tgggaggccc agttcggccc tgtctccgcc gacctcctgg
     1741 tgataagctt cacgttgggg cctatcgccc tgcacgtgtc gctgctcagc ctgatcgccg
     1801 tggtcctggc ctacctgatc gcgcgatcgc ttttctaggg ggattccgtg ggcaacctcg
     1861 gcttcaccga gatcatgatc atcctgctgg tggtgctgct cctgttcggc gcgaagcggc
     1921 tgccggaggt ggggtcgtcc atcggcaagg gcatccggga gttcaagcgc agcctctcgg
     1981 acacccagga agcgatcatg ggaaacgaag agccccgcag cacgctgccg ccgcgccagc
     2041 cggaagaccc ggtccagggg accaagccca ccggcgagcc gaagcggctc tcgcagcagt
     2101 aacgccgctc aggtgatcgg cggcagcggg gtctccgcgg cctgctgttg ttgctgccga
     2161 agcttcgcgc ggttgtccac gatcctggcc gactcgcgca gcgcggccat gtagccgcgg
     2221 atgcgcgcct ggcgcgcgag atcgatcatc ctggcccggt actcgtccag ctccttcgcg
     2281 aacttcgtcg agtccgccgg cgtccgctcc aacgactcca tcacgtacag cccgtccggc
     2341 gtgtcgagca gtccgctgcg ctgacccttc tccagcccga acgcggtgcc gacgaccatg
     2401 gggtcggtga gcggcgggtt cacccgggtg aagggcccga actcctggtg cggcaggctc
     2461 atcaccttgg ctgccccggg catggtctcg ccctgctcga gccgcttcag gtactcctcc
     2521 gccttcggct tggccagggc cttcttcttc tccgttcgca gcgcatgctc cacgcccggc
     2581 cggatctggg ccagcggcgg cacccccgcg gcctgagcgc tgtccagccg gaagacgtag
     2641 taggcgaagg agctctcgat cacggggctg gtggcgccgg gctcggcgcc gctgaaggcc
     2701 caggcgcctg cgtcggggac caccaagttc ccgatctgca cccgggtccc ctcctgcacg
     2761 ccgccggtgc gcccgatcgg cagagacaac gccttcgaca ccgtatccag cgcggccgga
     2821 tcgtcccgct ccgcggcgat ccgttccagg gagtcggccc gcgcgtccag ccggtcccgg
     2881 tgctcgccgg tgacctcgat ggggatgagg atgtgccggc ccttggcctt gtcgcccttg
     2941 cggctggtca tctcgatgac gtggaacccg aactgcgaga gcaccggctc cgacacccgc
     3001 ttcagcggca gcgcgaacgc ggccgagtcg aaggccgggt ccatgttgcc cttcgtccac
     3061 tcgggcagct cgccgccgtt cgcggccgag gcgctgtcgg cggactcccg gcgggcgacg
     3121 tcggcgaacg gctccccccc caggatcgcg gcacgggccg agtccgcgcg cgcccgcgcc
     3181 gccgccgtgt cgctggcgtc
//
LOCUS       DASUYN010000613         2796 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1297318, whole genome shotgun sequence.
ACCESSION   DASUYN010000613 DASUYN010000000
VERSION     DASUYN010000613.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2796)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2796)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2796
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1297318"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     regulatory      428..511
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01051"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cyclic di-GMP riboswitch class I; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="cyclic di-GMP"
                     /db_xref="RFAM:RF01051"
     gene            521..835
                     /locus_tag="VF061_12005"
     CDS             521..835
                     /locus_tag="VF061_12005"
                     /inference="COORDINATES: protein motif:HMM:NF024857.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HEX6670280.1"
                     /translation="MRTPQDVERGLTAPERLGLNTRVEIRKAATQLLEEMPEGSGRLV
                     IDLSYTREIDSAGLGALMLIQRRAAERRQSVVLRHPSEEIRFLLVLTKLSDLFEIESL
                     ED"
     gene            966..1334
                     /locus_tag="VF061_12010"
     CDS             966..1334
                     /locus_tag="VF061_12010"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX6670281.1"
                     /translation="MTESTRRRRVLIVEDEPALRLSYERAFRPRYDLVFASTGAEALE
                     QLEQHRPDVAVLDMRLPDTDGVELLRRIRLSQPELPVIITTAYMSIEPQLKVLDLPHS
                     GYIVKPFRLDELGARIDAVL"
     gene            1321..2037
                     /gene="ccmA"
                     /locus_tag="VF061_12015"
     CDS             1321..2037
                     /gene="ccmA"
                     /locus_tag="VF061_12015"
                     /EC_number="7.6.2.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR01189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015439 - ABC-type heme transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC exporter ATP-binding protein CcmA"
                     /protein_id="HEX6670282.1"
                     /translation="MPSSEAPLLRARGLRRSFGRVRVLKDVDLTLAAGEALAVAGPNG
                     AGKTTLLRLLAGLMRPSGGEIEVLGRPLRREGPDARRALGLVSHHSLLYDDLTLVENL
                     AFAARLYGLARPRETALAALEAAGLAGRAHDSPRRLSRGLAQRAAIARALLHRPRILL
                     LDEPFTALDAGSAERLREELRRRLAEGMGLVIVTHHLGEVWEVANRVAVMVEGKWAAL
                     EPREGTLAAFLPRYEGLIGA"
     gene            2030..2710
                     /locus_tag="VF061_12020"
     CDS             2030..2710
                     /locus_tag="VF061_12020"
                     /inference="COORDINATES: protein motif:HMM:NF015344.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015232 - heme transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmB"
                     /protein_id="HEX6670283.1"
                     /translation="MREALRLALAIAAKDIRVELRSRTALLSATVFAALVLVVFNFAR
                     DPTALAAIDLAPSVLWVTFALAAMVALNRAFTIERENAALDGLLLAPVPREAIFLGKL
                     LANLAFVGTVEAITLPLFVLFFNVNIGPALPGILGVTALATIGFVAVGTIFSAMAVRT
                     RFAELMLPVLLLPFMVPPLIGAVQATSRLLADRPLSEVVGWLRLLALYDVVFVTLCML
                     AFPAVVDE"
BASE COUNT          367 a         1010 c          961 g          458 t
ORIGIN      
        1 cacccgggcg agcggcatcc caccgtcggc ggacggatcg ccgccgggcc agcaccgaat
       61 gtcgctctgg cggaagaagc tcttcatcct catgacccgg aacgcgcgct ccgccacggc
      121 gttcttcggc ctgccgccca atcgggtggt ggagctcggc gcgcagatcc agttctagtc
      181 ctgtcgcatc gcccgccaag ccccggtgcc ccgcgccgga tgcgccgctc cgcggcccgc
      241 cgcacgcccc ctctatccgt tccccgtcgt ttgcagtaga atctcgcgga gtgcgacgca
      301 aggggccgca ctccggggtc tgagcccact tgcatgttat tgcgcgacag caagttggcc
      361 accctggcac cagactcgcc tttcccggat gcgcagccgc gtcatgccgg cggccaggcg
      421 tcgatccgcc cgataagagc acacccggag tgatccgggg ccgcaaaact agaggtctca
      481 cctgcagctg gtgagatagc tcggtgccga aggaggatgg atgaggaccc cgcaggacgt
      541 ggagcgcgga ctgaccgcgc ccgagcggct cgggttgaat acccgggtcg aaatacggaa
      601 ggctgccacc caactcctcg aggagatgcc cgaaggcagc gggcggctgg tgatcgatct
      661 ctcgtacacg cgcgagatcg actccgccgg gctcggcgcc ctgatgctga tccagcgccg
      721 cgccgccgag cggcgccaga gcgtggtgct ccggcacccg agcgaggaga tccgattcct
      781 cctcgtgctc accaaactgt ccgacctctt cgagatcgaa tcgctggagg attgagcgag
      841 cgctccgccg cggacatgcg acggagcgct atggctttga gtgtcgtgtg ccattactgt
      901 acgcccctgg ccacccatca ttacagtcgc ggcgcggccc gccgctggtc cgcggggaac
      961 cgggcatgac cgagtcgaca cgtcgccgtc gcgtcctcat cgtcgaggac gagccggcgt
     1021 tgcggttgag ttacgagcga gcgttccggc cccgctacga tctggtcttc gcctccaccg
     1081 gcgccgaggc gctggagcag ctggagcagc accggcccga cgtggccgtg ctcgacatgc
     1141 ggctgcccga caccgacggc gtcgagctgc tccgccgcat ccggctgagc cagccggagc
     1201 tgcccgtcat catcaccacc gcctacatga gcatcgagcc ccagctcaag gtgctcgatc
     1261 tgccccactc cggctacatc gtcaaaccct tccgtctcga cgagctcggc gcgcgcattg
     1321 atgccgtcct ctgaggcccc gctgctccgg gcccgggggc tcagacggtc cttcgggcgg
     1381 gtgcgggtac tcaaggacgt ggatctcacg ctcgccgccg gcgaggcgct cgccgtggcc
     1441 ggccccaatg gggccgggaa gaccacgctg ctccggctcc tcgccgggct catgcggccc
     1501 agcggcgggg agatcgaggt gctgggccgc ccgctgcgcc gcgaagggcc cgatgcgcgc
     1561 cgagcgctcg ggctcgtctc gcaccactcg ctgctctacg acgacctcac cctggtcgag
     1621 aacctcgcct tcgcggcgcg gctctacggg ctcgcccggc cccgcgagac ggcgctggcg
     1681 gcgctcgagg ccgcgggact ggcgggccgg gcgcacgatt caccccgccg gctgagccgc
     1741 gggctcgccc agcgcgccgc catcgcgcgc gccctgctgc accgtccccg gatcctcctg
     1801 ctcgacgagc cgttcacggc actcgacgcc ggctcggccg agcggctccg ggaggagctg
     1861 cgccgccggc tggccgaggg gatggggctc gtgatcgtga cgcatcacct gggcgaggtg
     1921 tgggaggtgg cgaaccgggt ggcggtgatg gtggaaggga agtgggccgc gctggagccg
     1981 cgcgagggga cgctggcggc gttcctcccc cgttatgagg gattgatcgg tgcgtgaggc
     2041 gctccggctc gccctcgcga tcgcggccaa ggacatccgc gtcgagctcc gcagccgcac
     2101 cgcgctgctc tcggccacgg tgttcgcggc gctcgtgctg gtggtgttca acttcgcccg
     2161 cgatccgacc gcgctcgccg ccatcgacct ggcgccgagc gttctgtggg tgaccttcgc
     2221 cctggcggcg atggtggcgc tcaaccgggc tttcaccatc gagcgggaga acgccgcgct
     2281 cgacgggctg ttgctggcac cggtgccgcg cgaggcgatc ttcctcggca agcttctcgc
     2341 caacctggcc ttcgtcggca cggtggaggc gatcacgctg ccgctgttcg tgctgttctt
     2401 caacgtgaac atcggcccgg cgctgcccgg gattctcggc gtgacggcgc tcgcgaccat
     2461 cggcttcgtg gcggtcggca ccatcttcag cgccatggcg gtgcggaccc gcttcgccga
     2521 gttgatgctg ccggtgctgc tgctgccgtt catggtgccg ccgctcatcg gcgcggtgca
     2581 ggccacctcc cgcctcctgg ccgaccgtcc gttgagcgag gtggtgggat ggcttaggtt
     2641 acttgccctc tacgacgtcg tcttcgtgac gctctgcatg ctcgcctttc ccgcggtggt
     2701 ggacgaatga ccagccaggc tcccggctcg ccgctcgccc ggcgcgggct gctcatctgc
     2761 gccctcgggc tcctcgggct ggccggggtc tacgtg
//
LOCUS       DASUYN010000614         3660 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1958914, whole genome shotgun sequence.
ACCESSION   DASUYN010000614 DASUYN010000000
VERSION     DASUYN010000614.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3660)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3660)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3660
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1958914"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..495)
                     /locus_tag="VF061_12025"
     CDS             complement(<1..495)
                     /locus_tag="VF061_12025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670284.1"
                     /translation="MRIVLATCRPKPALTAGDRRLAEALGRLGATAVAAPWDSIDPAL
                     EEGVVCLRSTWDYHLRWEEFREWVRGFDGGRHLWNPAGTVLWNADKGYLRDLVGAGVA
                     LPRTRWFDPGRRPDVAALLEEWGAARAVLKPRVSATAFGTHVVSRERGPTDAEWPPLE
                     RSGCL"
     gene            complement(522..1730)
                     /gene="gltS"
                     /locus_tag="VF061_12030"
     CDS             complement(522..1730)
                     /gene="gltS"
                     /locus_tag="VF061_12030"
                     /inference="COORDINATES: protein motif:HMM:TIGR00210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015501 - glutamate:sodium symporter
                     activity [Evidence IEA];
                     GO_process: GO:0015813 - L-glutamate transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/glutamate symporter"
                     /protein_id="HEX6670285.1"
                     /translation="MLNLKLDLLQTLSVAAVLYFLGLQLRQRIGWLDRLNIPAAVVGG
                     LLFALLVLAGRDRFLSVQLDTSAQPVLSVAFFSTIGMGASLALLRVGGIQVVIFLIFA
                     TVFCFVQNFLGIAIARGFGEHPLMGVMAGSVTLVGGPATGLAFAPMLEEAGLVGAGTL
                     ALTSATFGIVCGGLTGTPVGTWLIQRYRLTPSAPPGAQVAQEDVLAPRTLVVEADRED
                     APLIVTMIVLAAAMGLGSILSRWFEAREWTLPAYIGAMIVASIFRNVDDRTGWFKIDP
                     AAMDFVGGFALNIFLVVALMDLKLWQLAGQALPLFVILAAQVVVIAVFALTASFRLMG
                     RDYDSAVMATGFVGFALGTTANAVANMRALVTKYGPAPRAFLVVPLVGAFFIDFANAI
                     IITFFVHWLR"
     gene            complement(1750..2202)
                     /locus_tag="VF061_12035"
     CDS             complement(1750..2202)
                     /locus_tag="VF061_12035"
                     /inference="COORDINATES: protein motif:HMM:NF036743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670286.1"
                     /translation="MFDLELLGRPEGEGDRLFIWGRITLGAFRDEFQVPLFDWAPGDY
                     AAQWLDAAERLVAGAPAVVFLTHMMHPTAPYHMGWPAWREGDQVLVQERLFLAEQLGG
                     PFDFEHPEVHLGPRQEVSDEGLRISQWTVTVRDVAAFVERRRRSSVPA"
     gene            2326..3294
                     /locus_tag="VF061_12040"
     CDS             2326..3294
                     /locus_tag="VF061_12040"
                     /inference="COORDINATES: protein motif:HMM:NF014273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB N-terminal domain-containing protein"
                     /protein_id="HEX6670287.1"
                     /translation="MAEAKTAKKPRRSRKRPEAAPRSRGIAADVLGTGTPPATVTRLA
                     EAVEADGGAVLARYRDPLGGSWQLLAGLPIDLVEPTPYQRDLSEAHVTKLRAAIDKLG
                     RYLDPIVAVRTDEGRYWTPNGNHRLAALRTLGARSVVAILVPEMEVAHRILLLNTEKA
                     HNLRERALEVIRLAENLAQLDPRPEKEFESEFEEPALLTLGLCYQENGRFAGGAYHPV
                     LKRIEQFLSSPLPKALETRRERAARVLELDEAVTAAVKELKSKGFDSPYLRAFVVARI
                     NPLRFKRGAKADFDETIERMLAGARRFDPGRIRADQVARAGGAPEE"
     gene            3322..>3660
                     /locus_tag="VF061_12045"
     CDS             3322..>3660
                     /locus_tag="VF061_12045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670288.1"
                     /translation="MTQVTIGWGGLTLAVATLAACGGGRDAGDTGAATDTAAVAADSA
                     PAAAIALTVDSLEAPEAARFDPALGVYFLANINGSPLGKDGNGYISRLTRDGKVDSLK
                     VIAGGRGGVTL"
BASE COUNT          594 a         1290 c         1334 g          442 t
ORIGIN      
        1 caggcacccc gagcgctcca gcggaggcca ctccgcgtcg gtcggcccgc gctcccgcga
       61 gaccacgtgg gtgccgaacg ccgtggccga caccctcggc ttcagcaccg cgcgcgccgc
      121 gccccattcc tccagcagcg ccgccacgtc gggtcgccgg ccggggtcga accagcgggt
      181 ccgcgggagc gcgacacccg cgccgaccag gtcgcgcaga tagcccttgt cggcgttcca
      241 cagcacggtt ccggccgggt tccacaggtg ccggcccccg tcgaagcctc gcacccactc
      301 gcggaactcc tcccagcgca agtggtaatc ccaggtcgag cgaaggcaca ccaccccctc
      361 ctcgagcgcc ggatcgatac tgtcccaggg cgccgcgacg gcggtggcgc cgagtcgtcc
      421 gagcgcctcg gccagacgac ggtcaccggc ggtgagcgcc ggcttgggcc ggcaggtcgc
      481 gagcacgatc ctcactgcgg cggtcgagcc cgggacccgg ctcagcggag ccagtgcacg
      541 aagaacgtga tgatgatggc gttggcgaag tcgatgaaga aggcgccgac cagcgggacc
      601 accagaaagg cccgcggagc cgggccgtac ttcgtgacca gcgcacgcat gttcgccacg
      661 gcgttggccg tggtgccgag cgcgaacccc acgaagccgg tggccatcac ggcggagtcg
      721 tagtcccggc ccatgaggcg gaaggaggcg gtcagggcga agaccgcgat gacgacgacc
      781 tgggcggcga ggatgacgaa gagcggcagc gcctgccccg cgagctgcca cagcttgagg
      841 tccatcagcg cgaccacgag gaagatgttg agcgcgaatc cgccgacgaa gtccatcgcc
      901 gcgggatcga tcttgaacca ccccgtgcgg tcgtccacgt tgcggaagat cgaggcgacg
      961 atcatggcgc cgatgtaggc cggcagggtc cactcgcgcg cctcgaacca gcggctcagg
     1021 atgctgccca ggcccatggc ggccgcgagc acgatcatcg tgacgatcag gggcgcgtct
     1081 tcccggtcgg cctccaccac gagggtgcgg ggcgcgagga cgtcctcctg cgccacctgg
     1141 gcgcccggcg gggcggacgg cgtcaggcgg tagcgctgga tcagccacgt gccgaccggg
     1201 gtgccggtga gtccgccgca cacgatgccg aacgtggccg aggtgagcgc cagggtgccc
     1261 gcgcccacca accccgcctc ctccagcatc ggggcgaagg ccagtccggt cgccgggccg
     1321 cccaccaggg tgaccgatcc cgccatcacg cccatgagcg ggtgctcgcc gaacccccgc
     1381 gcgatggcga tcccgaggaa gttctgcacg aagcagaaca ccgtcgcgaa gatcaggaag
     1441 atcacgacct ggatgccgcc gacgcggagc agggccaggc tggcacccat gccgatggtg
     1501 ctgaagaagg cgacgctgag caccggctgg gcgctggtgt ccagctgcac gctcaggaag
     1561 cggtcgcggc ccgcgagcac cagcagcgcg aacagcagcc cgcccaccac cgctgcgggg
     1621 atgttcagcc gatcgagcca gccgatgcgc tgccgcagct ggaggcccag gaagtagagg
     1681 acggcggcca cgctcagggt ctgcaggaga tccagcttga gattgagcat cggatggggt
     1741 cggtggtggc taggcgggca cgctggaccg gcgccggcgc tcgacgaacg cggcgacgtc
     1801 acgcacggtc acggtccact gcgagatgcg gagcccctcg tcggacacct cctgcctggg
     1861 gccgaggtgg acttcgggat gctcgaagtc gaacggtcca ccgagctgct cggcgaggaa
     1921 gagccgctcc tgcaccagga cctggtcacc ctcgcgccac gcgggccagc ccatgtggta
     1981 gggggccgtg gggtgcatca tgtgggtgag gaagacgacg gcgggcgctc cggccacgag
     2041 tcgctccgcg gcgtcgagcc attgcgccgc gtagtcgccg ggcgcccagt cgaacagcgg
     2101 cacctgaaac tcgtcgcgga aggcgcccag tgtgatgcgg ccccagatga agagacgatc
     2161 gccctcgccc tccgggcgtc ccagcagctc cagatcgaac atcctcggtc cccccttcgg
     2221 ccgcctataa ctagggtggg accggcgcgg gcagcaaggg ccgtggcggg ttccggcgat
     2281 atgtcgttat tgtcaccctg agcgaacgac ccagcgaggg acgccatggc cgaggccaag
     2341 accgcgaaga agccgcgccg gtcgcgaaag cggcccgagg cggcgccgcg ctcccgcggg
     2401 atcgcggccg acgtgctcgg cacgggcacc ccgcccgcga ccgtgacccg gctggcggag
     2461 gcggtggagg ccgatggcgg ggcggtgctg gcccgctatc gcgaccccct gggggggagc
     2521 tggcagctcc tcgccggcct cccgatcgac ctggtcgagc ccacccccta ccagcgcgac
     2581 ctctccgaag cccacgtcac caagctccgc gccgccatcg acaagctggg tcgctacctc
     2641 gatccgatcg tggccgtgcg caccgacgag ggccgctact ggaccccgaa cggcaatcac
     2701 cgcctggccg cgctccggac cctgggcgcc cgctcggtgg tcgccatcct ggtgcccgag
     2761 atggaggtgg cgcaccggat cctgctgctc aacaccgaga aggcgcacaa cctgcgcgag
     2821 cgggcgctgg aggtgatccg cctggcggag aatctcgccc agctggaccc gcgtccggag
     2881 aaggagttcg agagcgagtt cgaggagccc gcgctgctca cgctcgggct ctgctaccag
     2941 gagaatgggc gcttcgccgg cggcgcctac cacccggtgc tcaagcggat cgagcagttc
     3001 ctctcgtcgc cgctgccgaa ggcgctggag acgcggcgcg agcgcgccgc gcgcgtgctg
     3061 gagctggacg aggcggtgac ggcggcggtc aaggagctca agtccaaggg cttcgacagc
     3121 ccctatctcc gggccttcgt ggtggcgcgg atcaacccgc tccgcttcaa gcggggcgcc
     3181 aaggcggatt tcgacgagac gatcgagcgc atgctggccg gcgcgcggcg gttcgatccg
     3241 gggcggatcc gggccgacca ggtcgcgcgg gcgggcgggg cgccggaaga gtagaccatc
     3301 aacgcgggga gggcggaggg catgacacag gtcacgatcg gatggggcgg gctgacgctg
     3361 gccgtggcga cgctcgcggc gtgcggcggc gggcgcgacg cgggtgacac cggcgccgcc
     3421 accgacacgg ccgccgtggc ggcggacagc gctcccgcgg cggcgatcgc gctcacggtg
     3481 gacagcctgg aggcccccga ggccgcccgg ttcgatcccg ccctcggcgt gtacttcctg
     3541 gccaacatca acggcagccc gctgggcaag gatggaaacg ggtacatcag ccggctcacc
     3601 cgcgacggca aggtggactc gctcaaggtc atcgccggcg ggcggggtgg cgtcaccctc
//
LOCUS       DASUYN010000615         2334 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_634318, whole genome shotgun sequence.
ACCESSION   DASUYN010000615 DASUYN010000000
VERSION     DASUYN010000615.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2334
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_634318"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..610)
                     /locus_tag="VF061_12050"
     CDS             complement(<1..610)
                     /locus_tag="VF061_12050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670289.1"
                     /translation="MAKAQRLAARPTRNRTRLLDRLDQTGRIVADAHDRLAAAAERDH
                     NVGPAGEWLLDNIHVVQEHILEVRESLPRGYYRELPELAGGPLAGYPRVYEIAISLIS
                     HTEARVELDDLTLFVAAFQEVSPLRIGELWALPAMLRLGLIESVRRMGLRSVRRLKEM
                     ETADTWAGRLTEAARDGDGSLEETLADFLERPPELSPTFVSRF"
     gene            952..>2334
                     /locus_tag="VF061_12055"
     CDS             952..>2334
                     /locus_tag="VF061_12055"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEX6670290.1"
                     /translation="MPADAASSPLLLLFVLTTIGLGCLAVFQWRSLRRAGESMARYQR
                     AEEEWLQREERFRTPLEQAEDYTIFLLDPTGRPTSWNSSVRRVLGYERPEFLRLSAAD
                     LHTPEEREAGASDRNLAEAAERGRANEDRWVVRKDGSRFWASVSLSSVHDRQRRLIGF
                     SQRLRDLSRSKGIEQQLRRKQDALELALEAAGLGTWEYDLVTGEMLWDERAKALFGLP
                     PDAPVAHPGWLDALHPEDQAPALAQWERALRDQSRFSAEYRVIWPDGAIRSIMAIGQC
                     TVDPATGDPRHLAGVMLDLTERRRTEEHLQETLRMEAVGRLAGGIAHDLNNMLAAILG
                     FSDLLGRSLDSDDPRREDARQIARAAERSAALTRQLLAFARRELIQPQLLDINTVVRH
                     ARPMLSSILGENVELALQLAPEVLVVYADARQIEQTLINLVANARDAMPRGGRLTIQT
                     RPVTLDPDARA"
BASE COUNT          322 a          841 c          849 g          322 t
ORIGIN      
        1 ggaagcggga gacgaaggtc ggcgagagct ccggcggccg ctccagaaaa tcggccagcg
       61 tctcctccag gctcccgtcg ccgtcgcggg cggcctccgt cagccgcccg gcccaggtgt
      121 ccgccgtctc catctccttg agccgccgca ccgatcgcag ccccatccgg cgcacgctct
      181 cgatcaaccc cagccgcagc atggcgggca gcgcccacag ctcgccgatc cggagcgggg
      241 acacctcctg gaaggcggcg acgaagaggg tcaggtcgtc gagctcgacc cgggcctcgg
      301 tgtgggagat cagggagatg gcgatctcgt acacccgcgg gtagcccgcc agcggaccgc
      361 cggcgagctc cggcaactcg cggtagtagc ctcgcggcag gctctcgcgg acctcgagga
      421 tgtgctcctg gaccacgtgg atgttgtcga gcagccactc gccggcgggg cccacgttgt
      481 ggtcgcgctc ggcggccgcg gcgagccggt cgtgcgcgtc ggcgacgatc cggccggtct
      541 ggtcgagccg gtcgaggagc cgggtgcggt tgcgggtggg gcgcgcggcc agccgctgcg
      601 ccttcgccac cgaccgggcc tgttccgcca gtccttcggc gccgagcagc tcaccccgga
      661 tcggtccggt gaggatctcg tcgaggctgg gacgtaggcc acgccgctgg aggcggcggg
      721 cgatggcggg agggatggcg gcggagggga tggcggctct cggcggctgc ggacagtgcg
      781 acgggaagga tcggactgaa ggtaactcgc gggggtgggg ggacgtccag agcgcccggt
      841 cccgcttgtc cctcggatgg ccctttccta tatatgttcg gtcatccgcg agatcgcggc
      901 gatcgccctc cccctctccc ccgctgcacc gccgctgacg aaggctcagg tatgccggcc
      961 gacgccgctt cctctcccct gctcctgctc ttcgtcctca ccacgatcgg gctcggctgc
     1021 ctcgcggtgt tccaatggcg ctcgctgcgc cgggccggcg agagcatggc ccggtaccag
     1081 cgcgccgagg aggagtggct ccagcgggag gagcgcttcc ggacccccct ggagcaggcc
     1141 gaggactaca ccatcttcct gctggatccc accggccggc cgaccagctg gaactccagc
     1201 gtgcgacgtg tcctggggta cgagcggccg gagtttctcc gactgtcggc cgcggacctt
     1261 cacacccccg aggagcggga ggccggggcc tccgaccgca acctggccga ggccgccgag
     1321 cgcgggcggg cgaacgagga ccggtgggtg gtgcggaagg acggcagtcg cttctgggcc
     1381 tcggtttccc tctccagcgt gcacgaccgg cagcgccgcc tgatcggctt ctcccagcgc
     1441 ctgcgcgatc tctcccgaag caagggcatc gagcagcagc tccgccgcaa gcaggacgcg
     1501 ctggagctgg cgctcgaggc cgccggcctc ggcacctggg agtacgacct cgtcaccggc
     1561 gagatgctgt gggacgaacg ggcaaaggcg ctcttcgggc tcccgccgga tgcgcccgtg
     1621 gctcacccgg gctggctgga tgccctccac ccggaggacc aggcaccggc cctggcgcag
     1681 tgggagcggg cgctgcgcga ccagtcgcgg ttctcggcgg aataccgggt gatctggccc
     1741 gacggcgcca ttcgctcgat catggccatc ggccagtgca ccgtggaccc ggcgacgggc
     1801 gacccgcgcc acctggcggg cgtcatgctc gacctcaccg agcggcgccg gaccgaggag
     1861 cacctgcagg agaccctgcg catggaggcg gtgggccgcc tcgccggcgg catcgcccac
     1921 gacctcaaca acatgctggc ggcgatcctg gggttcagcg acctgctggg ccgcagcctg
     1981 gactcggacg atccccggcg ggaggacgcc aggcagatcg cccgcgccgc cgagcggtcc
     2041 gccgcgctga cgcggcagct cctggcgttc gcgcggcggg agctgatcca gccgcaactg
     2101 ctggacatca acaccgtggt gcggcacgcg cggcccatgc tctcttcgat cctgggcgag
     2161 aacgtggagc tggccctgca gctcgccccc gaggtgctgg tggtctatgc cgacgcacgg
     2221 cagatcgagc agacgctcat caatctcgtc gccaacgcgc gggacgcgat gccccggggc
     2281 ggccggctca cgatccagac caggccggtc acgctcgatc ccgacgcgcg cgcg
//
LOCUS       DASUYN010000616         5524 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1297709, whole genome shotgun sequence.
ACCESSION   DASUYN010000616 DASUYN010000000
VERSION     DASUYN010000616.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5524)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5524)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5524
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1297709"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..683)
                     /locus_tag="VF061_12060"
     CDS             complement(<1..683)
                     /locus_tag="VF061_12060"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX6670291.1"
                     /translation="MSRPDRLVWAPDIPIRYVTLEDARIRYLVTGEGPALVLLHTLRT
                     QLDMFQKVIPALARHHRVYALDYPGHGWSEIPRLAYSPELFVRTVDQFLGRLDIHGAT
                     LAGESIGGSVALLLAARRHPRVRGVVAINPYDYDRGRGLRRSSVLANLVFGALPIPLL
                     GAAVMRLRNPFVEGRILRGGVRRDGAIPPALAREVYAVGSRPGHAGALISLVRHWPSW
                     EAARSEYGA"
     gene            complement(680..1144)
                     /locus_tag="VF061_12065"
     CDS             complement(680..1144)
                     /locus_tag="VF061_12065"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HEX6670292.1"
                     /translation="MNTSRSREAQSVQDAVLRCTCFNLRKAARAVTQLYDEFLRPSGL
                     RATQFSLLMLIRGLGPIRITELAEEAVMDRTTLKRNVDLLQREGLVRVQPGEDARSRE
                     VSLTAAAEQRLARALPLWQRAQAHVSHELGKGRTERLLADLSAAVDTAERSV"
     gene            complement(1242..1448)
                     /locus_tag="VF061_12070"
     CDS             complement(1242..1448)
                     /locus_tag="VF061_12070"
                     /inference="COORDINATES: protein motif:HMM:NF022577.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2892 domain-containing protein"
                     /protein_id="HEX6670293.1"
                     /translation="MSMHYAIRFVAGTFVLVSLALGYWVNPLWFLFTAFVGVNLIQSA
                     FTHWCLMERILAGLGVAQPEPLER"
     gene            complement(1459..4584)
                     /locus_tag="VF061_12075"
     CDS             complement(1459..4584)
                     /locus_tag="VF061_12075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX6670294.1"
                     /translation="MALGVSGRVARTFLNSRLTPLLTAAALVAGVGAVLTTPREEEPQ
                     ISVPMVDVFSALPGATPEEVERRVTEPLERRLWEISGVEHLYSQSTHSGAMTTVRFRV
                     GDDPEESVVKVFAKLSGSPALVKLHTIDEVPILALTFWGGGYDEYLLRQIAGELRNEL
                     QRIPDVAQIDLIGGAPRVVEVVPDPVRLAAHGLSAGQLLQALEAANAVLPAGAVLDAN
                     RHVELRAGSFLEHREDVAAVLVGVTDGHGIRLGDVATVSDGPGQPAWYVSHLSRGSEG
                     TQPAVTLAIAKRPGVNAAGLAERMLAHVEDLRGRLVPRDLQLTVTRNYGETANEKAEE
                     LLSHILIATLGVALLVWLALGWREAVVVLVAVPVTLALTLLVYRMLGYTLNRITLFAL
                     VFAIGILVDDAIVVVENIARHLGMRRGSAADAAVEGVDEVGNPTILATFAVIAAILPM
                     AFVSGLMGPYMRPIPVGASMAMLFSLGVAFIVTPYVALRLVREHHADGEHPRPSRMAG
                     AYAAWLRRLLARRGERLGFYAAVVVLLLASTALVLGGAVTVKMLPFDNKSEFQVVLDF
                     PAGTTLETSARGAQEIAERLAVDADVRDVQVYAGVAAPFNFNGLVRHYFLRQGPDVAD
                     LQVNLRDRHERDDQSHDVAVRLRPLVEEVARRYGASAKVAEIPPGPPVLATLTAEIYG
                     PTPEARRSAAERVRAIFDSVPGVVDVDWSLRAERPELRLTTLTDAAALAGLGPAEVAR
                     AMAVVGGVTAGTLRDPTAADPVDIVVRYADADRAGSEAVQSLRLPTRSGGLVPATAVA
                     RLEEHPAPQPLHRKDLKPVVYVTADVARELESPAYAMLAMEEELARAGIETRWAGPSD
                     LTEEPSLNWDGEWRITYEVFRDLGIAFAAVLLLIYLLVVAWFQSYTIPLVIMAPIPLT
                     LAGILPGHWLGGAFFTATSMIGMIALAGIIVRNSILLVDFVELARERGVPVQEAVVEA
                     GVVRARPILLTAAAVVVGGAVMVRDPIFQGLGIAMISGAIVATLLTLVVIPLLYADLE
                     GRAGRAPAPGS"
     gene            complement(4584..>5524)
                     /locus_tag="VF061_12080"
     CDS             complement(4584..>5524)
                     /locus_tag="VF061_12080"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX6670295.1"
                     /translation="PEQVVAARVETTEAVGRYRAAGTVRAARRAELSTRLMGRVQSVR
                     VRAGDRVRAGQLLLTVERAALTAAQQQAAAALAQAQNHLRRTERLYADSAAPLVQLEG
                     ARTAYEQARAQASAVEADLAYAEVRAPFAGVVVSREVDPGDQAAPGKPLLVVEDRSTR
                     EIVVTVPDEISAELRVGQRAAVEIGGGARRYEARILAVVPGADPLSPTVEIRLSGPAD
                     LAPGTAAVAELPAAAGHSALLVPETALTRRGQLVGVFLFAPDSTLRLRWIRTGRSRDS
                     LVEVLSGLRPGDVVALDASRARDGVAALPVLPAGGE"
BASE COUNT          814 a         2062 c         1952 g          696 t
ORIGIN      
        1 atggccccgt actccgaccg cgcggcttcc caggaaggcc agtgccgcac cagcgagatg
       61 agggcgccgg cgtgaccggg acggctgcct accgcgtaca cctcgcgggc gagcgccggc
      121 ggtatcgcgc catcgcggcg cacgcccccg cgcaggatcc gcccctccac gaacgggttc
      181 cgcaggcgca tgacggcggc tcccaggagc ggaatcggga gcgccccgaa gaccaggttc
      241 gcgagcaccg agctccggcg cagcccgcgg ccccgatcgt agtcgtaggg attgatcgcg
      301 acgacacccc gaactcgggg atgccggcgc gcggccagga gcagagcgac gctgccgccg
      361 atcgactcac ccgccagcgt ggccccgtgg atgtcgagcc ggcccagaaa ctggtccacc
      421 gtccgcacga agagctcggg cgagtacgcc aaccgcggaa tctcggacca gccatgtccc
      481 gggtaatcca gcgcatagac gcgatggtgc cgggccagcg cggggatcac cttctggaac
      541 atgtcgagct gcgtgcgcag cgtatgaagc aggaccagcg ccgggccctc gcccgtcacc
      601 aggtatcgga tccgtgcgtc ctcgagggtg acgtaccgga tcgggatgtc tggagcccag
      661 accagtctgt ccgggcggct catacactgc gctccgcggt gtccacggcg gcggacagat
      721 cggccagaag tcgctcggtg cgccccttgc cgagctcgtg ggagacatgg gcttgtgccc
      781 gctgccagag gggcaacgcc cgggccagcc gctgctccgc ggccgcggtc aggctcacct
      841 cccgtgatcg ggcgtcctcc cccggctgga cgcggaccag tccctcgcgt tgcagcaggt
      901 cgacattgcg cttgagcgtg gttcgatcca tgacggcttc ctcggccagc tcggtgatcc
      961 ggatcggtcc caggccccgg atgagcatca ggagagaaaa ttgggtggct cggagccccg
     1021 agggccgcag gaactcgtcg tacagctgcg tgaccgcgcg cgccgccttg cggagattga
     1081 aacaggtaca ccgcaggacc gcgtcctgaa cgctctgggc ctcccggctg cgtgatgtgt
     1141 tcatggaaag gagtatatac acatatcgcc gtctgtcaat ccgggagatc gcgccgacgt
     1201 gcggtgcgcg ggggccagtc ccctgcccca tgggccggag gtcaacgctc cagcggctcc
     1261 ggctgcgcca ccccgagccc ggcgaggatg cgctccatca ggcaccagtg ggtgaacgcc
     1321 gactggatca ggttcacccc cacgaacgcc gtgaacagga accacagtgg attgacccag
     1381 tatcccagcg cgagcgagac caggacgaac gtgccggcga cgaagcggat ggcgtagtgc
     1441 atggacatgg gatcctcctt acgaccccgg ggccggagcg cgaccggccc ggccctccag
     1501 gtcggcatac agcaggggaa tgacgaccag cgtgagcagc gtggcgacga tcgcgccgga
     1561 gatcatggcg atgccgaggc cctgaaagat ggggtcccgg accatcacgg ccccgcccac
     1621 cacgaccgcc gcggcggtga gcaggatggg ccgcgcccgc accacgccgg cctcgaccac
     1681 cgcctcctgc accggcaccc cgcgctcccg cgccagctcc acgaagtcca ccagcaggat
     1741 cgagttgcgg acgatgatcc cggcgagcgc gatcatgccg atcatcgagg tggcggtgaa
     1801 gaaggcgccg cccagccagt ggccgggcag gatgccggcg agcgtgagcg ggatcggcgc
     1861 catgatgacc agtgggatcg tgtacgactg gaaccaggcc acgaccagca ggtagatgag
     1921 cagcagcacc gcggcgaagg cgatgccgag gtcgcggaac acctcgtagg tgatccgcca
     1981 ttcaccgtcc cagttgaggc tcggctcctc ggtgaggtcc gagggaccgg cccagcgggt
     2041 ctcgatgccc gccctggcga gctcctcctc catggccagc atggcgtagg ccggcgactc
     2101 cagctcccgc gccacgtcgg cggtgacgta caccaccggc ttgaggtcct tccggtgcag
     2161 cggctggggc gcggggtgct cctccagcct cgccaccgcg gtcgccggca ccagcccgcc
     2221 gctgcgggtg ggcagccgca gactctgcac cgcctcgctg ccggcgcggt ccgcatcggc
     2281 gtagcgcacc acgatgtcca ccgggtcggc cgccgtcggg tcgcgcagcg tgccggcggt
     2341 caccccgccg accacggcca tggcccgcgc cacctccgcc gggccgagcc cggccagcgc
     2401 ggccgcgtcg gtgagggtgg tgagcctgag ctcggggcgc tccgcccgga gcgaccagtc
     2461 cacgtccacc acgcccggca ccgagtcgaa gatcgcccgc acccgctccg ccgccgaccg
     2521 tctcgcctcc ggggtggggc cgtagatctc ggcggtgagg gtggccagca ccggcggccc
     2581 gggcgggatc tcggccacct tcgcgctcgc cccgtaccgg cgggccacct cctccaccag
     2641 gggccggagg cgtaccgcga cgtcgtggct ctggtcgtcg cgctcgtggc ggtcgcgcag
     2701 gttcacctgc aggtcggcca cgtccggccc ctggcgcagg aagtagtggc ggaccaggcc
     2761 gttgaagttg aacggcgccg ccaccccggc gtacacctgc acgtcgcgca cgtcggcgtc
     2821 caccgccagc cgctcggcga tctcctgcgc cccccgcgcc gaggtctcga gcgtggtgcc
     2881 ggccgggaag tcgaggacca cctggaactc gctcttgttg tcgaagggga gcatcttgac
     2941 cgtcaccgcc cccccgagca ccagcgccgt ggacgcgagc agcaacacga ccaccgccgc
     3001 gtagaacccg agccgctcgc cgcggcgcgc gagcagccgg cggagccacg cggcgtaggc
     3061 gccggccatc cgcgacgggc ggggatgctc cccatcggcg tgatgctccc gcaccaggcg
     3121 gagcgccacg tacggcgtca cgatgaaggc gaccccgagc gagaagagca tcgccatcga
     3181 ggcgccgacc gggatcggcc gcatgtaggg tcccatgagt ccgctcacga acgccatcgg
     3241 caggatggcg gcgatcaccg caaaggtggc gaggatggtc gggttgccga cctcgtccac
     3301 gccctccacc gccgcatcgg ccgcgctgcc ccggcgcatc cccaggtgcc gggcgatgtt
     3361 ctccaccacc acgatggcat cgtccaccag gatgccgatg gcgaacacca gcgcgaagag
     3421 ggtgatgcgg ttcagggtgt agcccagcat ccggtagacc agcagcgtga gcgcgagggt
     3481 caccggcacg gccaccagca ccacgaccgc ctcgcgccag ccgagcgcga gccacaccag
     3541 cagcgccacg ccgagcgtgg cgatcaggat gtggctgagc agctcctccg ccttctcgtt
     3601 ggcggtctcg ccgtagttgc gggtgacggt gagctggagg tcgcggggca ccaggcggcc
     3661 gcggaggtcc tccacgtgcg ccagcatccg ctcggccagt ccggcggcgt tcacgcccgg
     3721 ccgcttggcg atggcgagcg tgacggcggg ctgggtgccc tcggagccgc gggagaggtg
     3781 ggagacgtac caggccggct ggcccggccc gtcgctgacc gtggcgacgt cgcccagccg
     3841 gatcccgtgg ccgtcggtca cacccacgag cacggcggcc acgtcctccc ggtgctccag
     3901 gaagctgccc gcgcgcagct cgacgtgccg gttggcgtcg agcaccgcgc ccgcgggcag
     3961 cacggcgttg gcggcctcga gcgcctggag cagctgcccg gccgagagcc cgtgcgccgc
     4021 gagccgcacc ggatcgggca ccacctccac cacccgggga gcgccgccga tcaggtcgat
     4081 ctgggcgacg tcggggatcc gctgcagctc gttccggagc tcgcccgcga tctggcgcag
     4141 caggtactcg tcgtagccgc cgccccagaa ggtgagcgcg aggatgggca cctcgtcgat
     4201 ggtgtggagc ttcaccagcg ccggcgaccc cgacagcttg gcgaacacct tcaccacgct
     4261 ctcctcgggg tcgtcgccca cgcggaagcg caccgtggtc atcgcgccgg agtgggtgga
     4321 ctgactgtag aggtgctcga cgcccgagat ctcccacagg cgccgctcca gcggctcggt
     4381 gacgcggcgc tccacttcct cgggcgtggc gccggggagc gcgctgaaca cgtccaccat
     4441 gggcacgctg atctgcggct cctcctcgcg cggcgtggtg agcaccgcgc ccacccccgc
     4501 cacgagcgcc gccgcggtga gcaggggcgt gagcctgctg ttgagaaagg tccgggcgac
     4561 ccggccggag acgcccagcg ccatcactcc cctcctgccg ggaggaccgg cagcgccgcc
     4621 acgccgtccc tggcccgcga cgcatccagc gccaccacgt cgccgggccg gagcccgctc
     4681 aggacctcga ccagcgagtc gcgcgacctc ccggtgcgga tccaccgcag tcgcagcgtg
     4741 gaatcgggtg cgaagaggaa gacccccacg agctgccccc gcctggtgag ggccgtctcg
     4801 ggcacgagga gtgcgctgtg tcccgcggcg gccggcagtt ccgccaccgc ggcggtgccg
     4861 ggcgcgagat cggccggccc ggacagccgg atctcgacgg tcgggctcag cgggtcggcg
     4921 cccggaacca cggcgaggat ccgggcctcg tagcgccgcg cgccgccgcc gatctccacc
     4981 gcggcgcgct gtcccaccct gagctccgcg ctgatctcgt ccggcacggt caccacgatc
     5041 tcgcgagtgc tccggtcctc caccaccagg agcggtttgc ccggcgccgc ctggtcgccg
     5101 ggatccacct cccggctcac cacgacgccc gcgaacgggg cccgcacctc ggcgtaggcg
     5161 aggtccgcct cgaccgcgct ggcctgcgcc cgggcctgct cgtaggcggt gcgggccccc
     5221 tccagctgga ccagcggcgc ggcgctgtcg gcatagagcc gttcggttcg gcgcaggtgg
     5281 ttctgggcct gcgccagcgc cgccgcggcc tgctgctggg ccgcggtgag cgcggcgcgc
     5341 tccacggtga gcagcaactg tccggcgcgc acccggtcgc ctgcgcgcac ccgcaccgac
     5401 tgcacccgtc ccatgagccg ggtggacagc tcggcgcggc gggcggcgcg aacggtcccg
     5461 gccgcccggt agcggccgac ggcctcggtc gtctcgaccc gcgccgcgac cacctgctcc
     5521 ggcg
//
LOCUS       DASUYN010000617         2713 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_416442, whole genome shotgun sequence.
ACCESSION   DASUYN010000617 DASUYN010000000
VERSION     DASUYN010000617.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2713)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2713)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2713
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_416442"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1199
                     /locus_tag="VF061_12085"
     CDS             <1..1199
                     /locus_tag="VF061_12085"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEX6670296.1"
                     /translation="PRTRMRAALVVAEVAVALMLLAGAGLMLRSFQRLMAVEYGFDPD
                     RLLTLQVWLPVPNDRSKGRFRTHAQRRDFYDRSLAAVQAVPGVRDAALTSRLPLRGQN
                     DARLVIEGRPSGPDEPPVTAEVRLVSPNYFETMGIPLLSGEGLPELSDSLTRRHVVVN
                     RTMAEKYWPGTSPIGRRVRFGTDGPWLTVTGIVGDVRQIGPADPPKEELYSAHHTVSS
                     QEMAMVVRTGDEDPERLGAAVTAAIRSVDPEQPVFGVMSMERVIEDATAERRISMLLL
                     LLFAGMALLLSAVGIYGVMAYTTTQRRHEIGIRLALGAGAPDVLRLVVGQGMRLVLLG
                     LGAGLLGAWVLSRALTSQLYGITAQDPLTYVTVALLLGTVALVATWVPARRATRVDPM
                     ISLRVE"
     gene            1196..>2713
                     /locus_tag="VF061_12090"
     CDS             1196..>2713
                     /locus_tag="VF061_12090"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX6670297.1"
                     /translation="MTGTIAGETRVVLRRLRRSPGFTAAAALTLALGIGANTALFSLA
                     DAALLRPLPYPTADRLMMLWSAQPGAGKAREQVSGADFLDWRREARALDAMAAWADWG
                     FALTGPGEVEELRSVRVSANIFELLGAPPALGRGFLPEEETSGRDRVVVLSHAFWSGR
                     LGADPAAVGRTLTLDGEPYEVVGVMPEGFRFPDEGAVALWNPLAFDGSELRSRAERRF
                     QVIGRLAPGATPADAAAELEVITHRLAEAHPETNAGWSAAAVPAGEAVAAGGRAALTL
                     LLGTVALVLLLACANVAHLFLARTLDRGSELAVRAALGGGRGRLIRLLVLECTAVVAL
                     GALAGVALAVWVVPLVHALDPGLLPRWRQGTIDGRVLGLTTALLVPVVLACGVLPGLQ
                     ALRVGGGAPSAVGSRLTEGRERARVRSALILGEVALATVLLAMAGLHLRSLVRLQRVD
                     PGFVPERVLAATVFLSGPRYAADTLQIGFFAGLLQRLGAAPGVATAGAVTTLPMNP"
BASE COUNT          303 a          984 c         1020 g          406 t
ORIGIN      
        1 cgccgcgcac ccggatgcga gcggccctcg tcgtcgccga agtcgccgtg gcgctcatgc
       61 tcctcgccgg ggccgggctc atgctgcgga gcttccagcg gctcatggca gtcgagtacg
      121 gcttcgatcc cgaccggctc ctcaccctcc aggtctggct gcccgtcccg aacgaccgct
      181 ccaaaggccg cttccggacc cacgcgcagc gccgcgactt ctacgaccgc tcgctcgcgg
      241 cggtgcaggc ggtgcccggc gtgcgggacg ccgcgctgac ctcccggctg ccgctccggg
      301 gccagaacga cgctcggctc gtgatcgagg gccggcccag cggccccgat gagcctccgg
      361 tgaccgccga ggtcaggctg gtgagcccca actacttcga gacgatgggg atcccgctcc
      421 tgtcggggga gggcctgccg gagctgtcgg actcgctcac ccggaggcac gtcgtggtga
      481 accgcaccat ggcggagaag tactggcccg gcacgtcccc catcgggcgg cgggtccggt
      541 tcgggaccga tggcccatgg ctgacggtga ccggcatcgt gggcgacgtc cgtcagatcg
      601 gacccgcgga ccccccgaag gaggagctgt acagcgcgca ccacaccgtc tcgtcgcagg
      661 aaatggccat ggtggtgcgg accggcgacg aggaccccga gcggcttggc gccgccgtta
      721 ccgccgcgat tcggagcgtg gacccggagc agccggtgtt cggggtgatg tccatggagc
      781 gggtcatcga agacgccacc gcggagcgcc ggatctccat gttgctcctg ctcctcttcg
      841 ccggcatggc gctgctgctc tccgcagtcg gcatctatgg ggtcatggcg tacaccacga
      901 cccagcggcg ccacgagatc ggcatccggc tggcgctggg cgccggcgcc cccgacgtgc
      961 tgcggctggt cgtggggcag gggatgcggc tggtgctgct gggactcggc gccgggctgc
     1021 tgggcgcctg ggtgctgagc cgcgcgctca ccagccagct ctacgggatc accgcgcagg
     1081 atccgctgac gtacgtgacg gtggccctcc tgctcggcac cgtcgcgctg gtggccacct
     1141 gggtgccggc ccgccgggcg acccgggtgg atccgatgat ctccttgaga gtcgagtgac
     1201 cgggacgatc gcgggagaaa cgcgggtcgt cctccgccgc ctgcgccgga gccccgggtt
     1261 caccgccgcc gccgcgctca cgctggcgct cggcatcggc gctaacaccg cactcttcag
     1321 cctggccgac gccgccctcc tccggccgct gccgtatccc accgcggacc ggctgatgat
     1381 gctgtggtcg gcccagcccg gcgccggcaa ggctcgggag caggtctccg gggccgactt
     1441 cctcgactgg cgccgcgagg cccgcgcact cgacgcgatg gcggcgtggg ccgactgggg
     1501 atttgcgctc accggcccgg gagaagtcga ggagctgcgc tcggtacggg tctcggccaa
     1561 catcttcgag ctgctgggag cgcccccggc gctgggacgc ggctttctcc cggaggagga
     1621 gacgagcggc cgcgaccgcg tggtggtgct gagccatgcc ttctggtccg ggaggctcgg
     1681 cgcggatccc gctgccgtcg gccggaccct caccctcgac ggcgagccgt acgaggtcgt
     1741 cggggtgatg cccgaggggt tccggtttcc ggacgagggc gcggtcgcgc tctggaatcc
     1801 gctggcgttc gacggctcgg agctgcggag ccgggcggag cggcggttcc aggtgatcgg
     1861 ccggctggcg cccggcgcca cgcccgccga tgcggcggcc gagctcgagg tgatcaccca
     1921 taggctggcg gaggcgcacc cggagaccaa cgccggctgg tccgccgcgg ccgtgcccgc
     1981 gggtgaggcg gtggcggcgg gcggacgtgc cgcgctcacg ctactcctgg gcaccgtggc
     2041 gctggtgctg ctgctcgcct gcgccaacgt cgcgcacctc ttcctggcgc gcacgctcga
     2101 ccgcgggagc gagttggccg tgcgcgcggc gctcggcggt ggtcgcggcc gcctcatccg
     2161 cctgctggta ctcgagtgca ccgcggtcgt cgcgctgggc gcactggcgg gtgtcgcgct
     2221 cgccgtgtgg gtggtgccat tggtgcacgc gctcgacccg ggcctgctcc cgcgctggcg
     2281 acagggcacg atcgacgggc gggtgctcgg cctcaccacc gcgctcctcg tgccagtcgt
     2341 cctcgcctgc ggcgtgctcc ctggactgca ggcccttcgg gtcggcggcg gggcgccatc
     2401 cgcggtcggc tccaggctca ccgaaggtcg cgagcgcgcg cgggtgcgga gcgcgctgat
     2461 cctcggggag gtcgcgctcg ccaccgtcct gctcgcgatg gcgggcctcc atctccggag
     2521 cctggtgcgg ctgcagcggg tggaccccgg cttcgttccg gagcgggtgc tcgcggcgac
     2581 cgtcttcctc tcgggcccgc gctatgcggc cgacacgctg cagatcggtt tcttcgccgg
     2641 tctcctccag cggctgggcg cggcgccggg cgtggcgacg gcgggcgcgg tgaccacgct
     2701 cccgatgaac ccg
//
LOCUS       DASUYN010000618         3370 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1298078, whole genome shotgun sequence.
ACCESSION   DASUYN010000618 DASUYN010000000
VERSION     DASUYN010000618.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3370)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3370)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3370
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1298078"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..339)
                     /locus_tag="VF061_12095"
     CDS             complement(<1..339)
                     /locus_tag="VF061_12095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670298.1"
                     /translation="MNVPPHTTRARWSSRCFRRRGLGVLLLVLGATACGREAAPPGER
                     AAQPSGAGPIGTRAAAQPMLPPGADQGEWTIPARDYGSTRFSPLDQITADNVGRLRLA
                     WSFSTGVLRGH"
     gene            complement(461..1252)
                     /locus_tag="VF061_12100"
     CDS             complement(461..1252)
                     /locus_tag="VF061_12100"
                     /inference="COORDINATES: protein motif:HMM:NF013397.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015499 - formate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015724 - formate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate/nitrite transporter family protein"
                     /protein_id="HEX6670299.1"
                     /translation="MAEQPEEGTRLTAAQIHENVLRPAEQEIRRPAAALLLSALAAGL
                     VIGFSCLAAAFMASLVSEPYRHAAAAAAYPLGFIFVIMARSELFTENTLVPVIPLLER
                     RDIATLRLVARIWALLLVGNLIGTVLFGVVLAQTELLRPEYAAELLRLSREATEGGFG
                     EIVYAAVFAGWLMALLAWLLASTTSTLAQIVFIWLCTAPISALHFRHSIVGSTEAFYR
                     AALGDATWGAMLWGFVTPSVIGNAVGGVLLVALLNYGQVLADREG"
     gene            complement(1253..2428)
                     /locus_tag="VF061_12105"
     CDS             complement(1253..2428)
                     /locus_tag="VF061_12105"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEX6670300.1"
                     /translation="MSTRAKPVDPGWRTRDILRAAALVAGVYVALQLLWVGRSVFLIG
                     FFGVLLGITLSAGVDRLERFRIPRGVGALLILLLFFGALTGIGLFAAPQVSRQLGELR
                     QQVPEAIDRVERWVQQRGGGVAQIIQAASDTTAQRPGAADGDSAAADTAKAQPSSPEQ
                     SGPVDLRKSLTQQLAGVGRHFFSFFSSTVAALGALVILLFVAIFVAVDPGLYHRGLMH
                     LFPHAARRRAGEVLSATATTLRRWLLMQMVAMLAIGVVTTVVLLLLGVKAAIALGIIA
                     GLLEFIPYVGPILSAVPAIAMALVDGPEKAIYVALAYVAIQQLEGVVLQPLLMKEGLE
                     LPPVMTLLGQALLSLVFGFLGLLLAVPLLATVMVPVKLLYVRDVVGDEVSVPGEESG"
     gene            complement(2477..>3370)
                     /locus_tag="VF061_12110"
     CDS             complement(2477..>3370)
                     /locus_tag="VF061_12110"
                     /inference="COORDINATES: protein motif:HMM:NF021214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase assembly protein"
                     /protein_id="HEX6670301.1"
                     /translation="LPSGWRRGVGAWLGRLRPLWRALTRIDVAWVLHAGAIIGWHLPA
                     LYQRTVDSDLIHGLQHSSFLLTALLFWWSVLPGAALRGRQGAAIMSLFATMVYTGGLG
                     ALLTLGRSLWYPAYGEAAPLWGLTPLEDQQLAGLIMWVPGGVSYVLATAWLVIDWLRA
                     SEVTARRMDRARARAVAAVLLIALFIPSCERPRALTAGEAAAVSGGDPARGELAFRRY
                     GCGSCHSINGVPGAAGLVGPPLGGIGARAYVAGVLINTPENLVRWIQAPQDVDALTAM
                     PDVGVTADDARDLAAWLYTRR"
BASE COUNT          579 a         1209 c         1206 g          376 t
ORIGIN      
        1 atggccccgc agcacgccgg tggagaagct ccaggccagg cggagcctgc ccacgttgtc
       61 ggcggtgatc tggtcgagcg ggctgaagcg ggtactcccg taatcccgcg cggggatggt
      121 ccactcgccc tggtccgcgc ccggcgggag catcggctgg gcggcggcgc gggtaccgat
      181 cgggccggct ccggagggct gggcggcccg ctcgccgggt ggagccgcct cgcggccaca
      241 ggcggtcgcc ccgaggacca gcagcaggac gcccaggccg cgccggcgga agcaccgcga
      301 cgaccagcgc gctcgagtcg tatgaggcgg aacgttcatg acttcagccg ccgcgaacag
      361 gacacggcag ggtcggcgcg tgaggacggc acaccggccg gtggatctcg gatggtagac
      421 gtggctcgac ccgggcggcg gtgaggcccg tcacaaggct tcaaccctct cggtcggcga
      481 gcacctgccc gtagttgagc aatgccacca gcagcacgcc gcccacggcg ttgccgatga
      541 ccgagggggt cacgaacccc cagagcatgg cgccccacgt ggcatcgccg agcgcggcgc
      601 ggtagaaggc ctcggtgctg ccgacgatcg agtggcggaa gtgcagcgcg gagatgggcg
      661 cggtacagag ccagatgaag acgatctgcg ccagcgtgga cgtggtggag gcgagcagcc
      721 aggccagcag cgccatcagc catccggcga acacggccgc gtagacgatc tcgccgaagc
      781 ccccctcggt cgcctcccgc gagagccgga gcagctcggc cgcgtactcc gggcggagca
      841 gctcggtctg cgccaggacg accccgaaga gcaccgtccc gatcagattg cccaccagca
      901 gcagggccca aatccgcgcc accagacgca gcgtcgcgat gtcccgacgc tccagcagcg
      961 ggatcaccgg gaccagggtg ttctcggtaa agagctcgct gcgcgccatg atcacgaaga
     1021 tgaagccgag cgggtaggcg gccgcggcgg cggcatgccg gtagggctcc gagaccaggg
     1081 acgccatgaa ggcggccgcg agacagctga agccgatcac cagccccgcg gcgagggcgg
     1141 acagcagcag cgccgccgcc ggccggcgga tctcctgctc cgccggccgc agcacgtttt
     1201 cgtgaatctg cgccgccgtg aggcgggtgc cctcctcggg ctgctccgcc atctagccgc
     1261 tctcctcgcc gggcacactg acctcgtccc ccaccacgtc ccgcacgtac agcagcttca
     1321 ccggcaccat gaccgtggcc aggagcggta ccgcgagcag caggcccagg aatccgaaca
     1381 ccagggacag gagcgcctgc cccaggagcg tcatcaccgg cggcagctcc agtccctcct
     1441 tcatcaacag cggttggagc acgacgccct cgagctgctg gatcgcgacg taggccaggg
     1501 cgacatagat cgccttctcc ggcccgtcca ccagcgccat ggcgatcgcg ggtacggcgg
     1561 agagaatggg gccgacgtag ggaatgaact ccagcagccc cgcgatgatg cccagcgcga
     1621 tcgcagcctt caccccgagg agcagcagga ccacggtcgt caccacgccg atcgccagca
     1681 tcgcgaccat ctgcatcagc agccagcgac ggagggtcgt ggcggtggca ctgagcacct
     1741 cccccgccct gcgccgtgcc gcatggggga agaggtgcat cagtccccgg tgatacaggc
     1801 cgggatccac cgcgacgaaa atggcgacga agagcaggat gacgagcgcg cccagcgccg
     1861 cgacggtgga ggagaagaag gagaagaagt ggcggccgac gcccgcgagc tgctgggtca
     1921 gcgacttccg gagatccacc gggccggact gctcggggct cgacggctgg gccttcgcgg
     1981 tgtcggcggc ggcgctatct ccgtccgcgg caccgggccg ttgcgcagtc gtgtcggagg
     2041 cggcctggat gatctgcgca acgcctccgc cccgctgctg cacccaccgc tccacccgat
     2101 cgatcgcctc gggcacctgc tgccgcagct cgcccagctg ccggctcacc tggggcgcgg
     2161 cgaagagccc gatcccggtg agtgccccga agaagaggag cagaatgagc agcgcgccca
     2221 cgccgcgcgg gatccggaac cgctccagcc gatccacgcc ggccgacagc gtgatgccga
     2281 gcagcacgcc gaagaacccg atgaggaaga cggagcggcc cacccacagc aactggaggg
     2341 cgacatacac gccggccacc agcgccgctg cgcggaggat gtcacgggtc cgccagccgg
     2401 ggtctaccgg tttggccctg gtgctcatgt acgatcctca cggggcaggt tcggtcgctc
     2461 ggtgaccggg cgcacgtcag cgccgggtgt acagccaggc ggcgaggtcg cgggcgtcgt
     2521 ccgcagtgac gcccacgtcg ggcatcgccg tgagagcgtc cacgtcctgg ggcgcctgga
     2581 tccagcggac caggttctcc ggcgtattga tgagcacgcc cgccacatag gccctggcac
     2641 cgatcccgcc cagcggcggg cccaccagcc cggccgcgcc aggcacgcca ttgatggaat
     2701 ggcaggagcc gcagccgtac cgccggaagg ccagctcccc gcgcgccgga tcgccgccgg
     2761 acaccgccgc cgcctccccg gccgtgagcg cgcgggggcg ctcgcagctc gggatgaaca
     2821 gggctatcaa gagaacggcg gccaccgccc gcgcgcgagc ccggtccatc cgccgggccg
     2881 tcacttcgga ggctcgcagc cagtcgatca ccagccaggc cgtggccagc acgtacgaca
     2941 cgccacccgg cacccacatg atgagcccgg cgagctgctg gtcctcgagc ggggtgagtc
     3001 cccagagcgg ggcggcctcg ccgtaggcgg gataccagag cgaccggccg agcgtgagga
     3061 gcgcgccgag cccgccggtg tagaccatgg tggcgaagag tgacatgatc gccgcaccct
     3121 gacggccccg gagcgcggcg cccggcagga ccgaccacca gaagagcaac gcggtgagca
     3181 ggaagctcga gtgctggagg ccgtggatca ggtccgagtc caccgtgcgc tggtagagcg
     3241 cgggcaggtg ccacccgatg atcgccccgg cgtgcagcac ccaggcgacg tcgatccggg
     3301 tgagcgcgcg ccagaggggc cgcagccggc ccagccaggc gccgacgccg cgccgccagc
     3361 cggacggcag
//
LOCUS       DASUYN010000619         4164 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_193709, whole genome shotgun sequence.
ACCESSION   DASUYN010000619 DASUYN010000000
VERSION     DASUYN010000619.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4164
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_193709"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..197)
                     /locus_tag="VF061_12115"
     CDS             complement(<1..197)
                     /locus_tag="VF061_12115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670302.1"
                     /translation="MEVIPENDAVGGDDAEHLARDLLSDYGIKDGRKNHRLEHDVEAV
                     GLETELRRVSALDGDPGRREPP"
     gene            428..1900
                     /locus_tag="VF061_12120"
     CDS             428..1900
                     /locus_tag="VF061_12120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670303.1"
                     /translation="MTVARCGVADTDIPPRDDDQAQTAPALVARLARSLEDHGVVYCQ
                     WKGQRKHARWSAGHGDIDLLVHRGSVRPFRDTLTRLGFKPVLPGPGRGMVATESFLGY
                     DPQAERLVHVHAHYRLMVGDYWRTAYRVPLEEPILAATGPGPVFPVPAPELELLAFVL
                     RMVGRYSVGQLVAGRQPRWLPEIQAELTDLESQADRDRLRQSLAEYLPSVEMDWFDRC
                     LQSLRPSAGRWGRLALRRQLTARLAPHAVRPSALAVLAAANDWATARIMRRRRRRPGL
                     AEGGLVVALLGGDGAGKSTCARELYQWLSRSLRVRWAHLGKPPRSALTLLVGGALKAC
                     RLVGGLGGVGTQVEMLRHVCTARDRYRLYVSACRTAAAGGIAICERFPIEQNRILAGP
                     CLDLAPYAGYGGGLAAAMRRLEARYYRRIVEPELVLVLRLDPEVAVRRKTTEPADYVR
                     ARARVIWETDWAATRARVVDAGRPLPLVVADLKHLIWETV"
     gene            1902..2579
                     /locus_tag="VF061_12125"
     CDS             1902..2579
                     /locus_tag="VF061_12125"
                     /inference="COORDINATES: protein motif:HMM:NF024635.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX6670304.1"
                     /translation="MPLAGGANHQPVFLELIGPAGAGKSSLSRLLARRESVTRTSIWE
                     TPESHLALDSIRTLPTLAALSMRARALLWQEFKHVVRVRDLRRRMNRMGGRLVVLDEG
                     PVYTVTWLLVSGHRSIREGRLEQWWRRTLADWASDLDVIVVLDAADELLAERIRSRTK
                     PHNVKHKSDAEIYAFLDRFRSAFDRVLTEVVRERGTRVLRLAGDCESQRLADDLVKEL
                     VGGGRGD"
     gene            2569..4164
                     /locus_tag="VF061_12130"
     CDS             2569..4164
                     /locus_tag="VF061_12130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670305.1"
                     /translation="MATEAAGLSRSAPPPEPAATSSRPLTAAASLNALQSLLDYVAKL
                     AVGLVIVPILLSGLGRTLFGVWEMLHKLVGYLAAADGRPTQALRLVIAHGRTTADPDS
                     QRRQVASAMVVWLLFLPLFATVGGVVIWLAPHITRVPVDLHSTVRAACGLLVGGLVFG
                     TLASIPESVLRGMNLGYRRMGLQAGLSVCGGILTAAAVYAGLGLAGVAAAQVALGVLT
                     GACFWLLVRKYVGWFGLARPRAAEVRALFGMSLWLAGGDLIAKLLLASDVLILGMVVS
                     AAAVTSYVLTGYAARLAVNLHVLSTDGVMPGLAGVIGEGRYDRAAEVREELLALTWIF
                     ATVAGATILLWNRSFLHLWVGGENYAGFWPNVLIVVIAIQTSFIRADAYILDAALRPR
                     SRVQVGACAAVVTLLCCFALTREYGVIGLCLGVLAGRAIQTVAYPLLVRASLRQPRAW
                     RPRSVLRAGLVTVLLYIGAARLGEDVLAANWLSWTAGVALTAAALLGLAFMTGLSGTS
                     REAVVRRVKALRAGRRGRTGRVS"
BASE COUNT          524 a         1396 c         1497 g          747 t
ORIGIN      
        1 ggaggctctc tcctacccgg gtcaccatcg agtgcggaaa cgcggcggag ctccgtttcg
       61 agcccgacag cttcgacatc gtgctccaat cgatggtttt ttcttccatc cttgatcccg
      121 taatccgaca gaaggtcgcg agcgagatgc tccgcgtcgt cgccgccgac ggcgtcattc
      181 tctggtatga cttccacatc gccaatccac ggaaccggga tgtccgggcg gtgcggaaac
      241 aggagatccg gcgcctattt ccaggcagct cggtaaagct ccatcggatc accctggcag
      301 gtccgctcgc gcggtcgctg gccccccgct cctggctcgc atgccaactc ctggctctgc
      361 ttcctccgct tcggtcgcac tatctgggta ttgtccggag gcagaactcc cttcgccagg
      421 atcaccattg acagttgcgc gttgtggcgt cgccgacacc gacattcctc cgagagacga
      481 tgaccaggcc cagacggccc cggccctcgt tgcccggctg gcgcggtccc tcgaggacca
      541 cggggtggtc tactgccaat ggaaggggca gcggaagcac gcgcggtggt ccgcggggca
      601 tggggacatc gatctgctcg tccatcgcgg gagcgtgcgc ccgttccgcg acaccctgac
      661 gcgcctcgga ttcaagcccg tgctccccgg gcccgggcgg ggaatggtgg cgaccgagag
      721 cttcctcggc tacgacccgc aggccgagcg gctggtccat gtgcatgccc actaccggct
      781 gatggtgggc gactactggc ggacggccta tcgggtcccg ctcgaggagc cgatcctcgc
      841 cgcgaccggt cccgggccgg tattcccggt gccggcgccc gagctcgagc tcctggcgtt
      901 cgtcctgcgc atggtcggtc gctattcggt ggggcagttg gtggcaggcc ggcagccgcg
      961 atggctgccg gagatccaag cggagctgac cgacctggag tcccaggctg accgggatcg
     1021 gctgcggcag tcgctggctg agtacttgcc gagcgtcgaa atggattggt tcgaccggtg
     1081 tctccagtca ctccgaccgt cggccggccg ctggggtcgg ctggcgctcc gacgtcagtt
     1141 gaccgcgcgg ctggcccccc acgcggtccg gccatcggcc ctggcggtcc tggcggcggc
     1201 gaacgattgg gcgactgccc ggatcatgcg gcgccgtcgg aggcgtcccg gcttggccga
     1261 gggcggcctc gtggtggctc tgctcggcgg tgacggcgcg ggcaagtcga cctgcgcgcg
     1321 ggagctgtac cagtggctgt cccggtcgct ccgtgtgcgc tgggcccacc tgggcaagcc
     1381 gccgcggtcg gcgctcacgc tgctcgtcgg cggcgccctc aaggcgtgtc ggttggtcgg
     1441 cggtctgggg ggggtcggca cgcaggtcga gatgctgcgg cacgtgtgca ccgcgcgcga
     1501 tcgctatcgc ttgtacgtgt cggcctgccg gaccgccgcc gccggcggta tcgccatctg
     1561 cgagcgcttt cccatcgagc agaatcggat cctggcaggc ccctgcctcg acctggcgcc
     1621 ctacgccggg tacggcggcg gcctggcggc ggccatgcgc cggctcgagg cacgctacta
     1681 tcgccggatc gtcgagcctg agctggtcct cgtcttgcgt ctggatcccg aggtcgccgt
     1741 ccgacgcaag acgacggagc ccgcggacta tgtgcgcgcc cgggcgcgtg tgatctggga
     1801 gaccgactgg gcggcgaccc gggctcgcgt ggtggacgcc ggccggccgc tcccgctggt
     1861 cgtggccgat ctcaagcacc tcatctggga aaccgtgtag catgccgctc gctggcggag
     1921 ccaatcacca accggtcttc ctcgagctca tcggccctgc cggcgccggg aagagcagcc
     1981 tttcccgcct gctggcccgg cgcgagagcg tcacccggac gagtatctgg gaaacgccgg
     2041 agtcccacct cgcgctggat tcgatacgca cgctaccgac actggccgcc ctctcgatgc
     2101 gcgcccgggc gctgttgtgg caggagttca agcacgtggt gcgggtacgg gatctccggc
     2161 gccggatgaa ccggatgggc ggccgcctgg tcgtccttga cgaaggtccg gtgtacacgg
     2221 tcacctggct gctggtcagt ggacatcgaa gcatccggga ggggcgtctg gagcagtggt
     2281 ggcggcgaac gctggccgac tgggcgtcgg atctcgatgt catcgtggtc ctcgacgccg
     2341 cggacgagct cctggctgag cgcatccgct cccggaccaa gccccacaac gtcaagcaca
     2401 agtcggatgc ggaaatctat gcgttcctgg accggttccg gtcggccttc gaccgggtgc
     2461 tgaccgaggt cgtgagggag cgcggcacgc gggtacttcg gctggcggga gactgcgaga
     2521 gccagcggct cgccgacgac ctggtgaagg aactcgtggg aggcggccgt ggcgactgag
     2581 gccgccggcc tgtcgcgaag cgctcctccg ccagagccgg cggcgacttc gtcccgtcca
     2641 ctcacggccg cggcgtcgct gaacgcgctg cagtcgctgc tggattacgt cgccaaactg
     2701 gccgtcgggc tggtcatcgt tcccatcctg ctcagcggat tggggcgcac cctctttggg
     2761 gtgtgggaga tgctgcacaa gctggtgggc tacctggccg cggcggacgg ccgcccgacc
     2821 caggccctcc gtctggtcat cgcccatggg cggaccacgg ccgaccccga ctcgcagcga
     2881 cgacaggtcg cgagcgccat ggtcgtctgg ctgctcttcc tcccgctgtt cgcgactgtc
     2941 ggtggggtag tgatctggct cgccccgcac attacccgcg tcccggtgga tctgcattcg
     3001 accgtccgag cggcctgcgg actgctggtg ggtggcctcg tgttcggcac cttggcgtcc
     3061 attcccgagt cggtgttgcg tgggatgaac ctgggctacc ggcgaatggg gcttcaggcg
     3121 gggttaagcg tgtgcggggg aatcctcacc gcagcggcag tctatgcggg cctcggcctg
     3181 gccggtgtcg ccgcggcgca ggtggccctg ggtgtgctga cgggggcctg cttctggctg
     3241 ctggtccgca agtacgtggg ctggttcggc ctggcgcgtc cgcgcgcggc cgaggtgcgc
     3301 gccctcttcg gcatgagcct gtggctggcg gggggcgatc tcatcgccaa gctcctcctg
     3361 gccagtgacg tgctgatcct ggggatggtg gtctccgccg cggccgtgac gtcctacgtg
     3421 ctcacgggct atgccgccag gctggcggtg aacctccatg tcctgagtac cgatggcgtc
     3481 atgcccggcc tggctggagt catcggcgag gggcgctacg atcgagccgc ggaagtccga
     3541 gaggagttgc tcgcgctcac ctggatcttc gcgaccgtcg caggggccac gatcctgctg
     3601 tggaatcggt cgtttctgca tctctgggtc ggcggtgaga actatgccgg gttctggccc
     3661 aacgtgctga tcgtcgtgat cgccatccag acgtccttca tccgcgccga tgcctacatc
     3721 ctggacgccg ctctccggcc gcgctcgaga gtgcaggtgg gtgcctgcgc tgcggtcgtt
     3781 accctgctgt gctgcttcgc cctgacacgc gagtatggcg tcatcggact ctgtctcggc
     3841 gtccttgccg ggcgagcgat ccagacggtc gcgtatcccc tgctggtgcg cgcttcgctg
     3901 cgacagcccc gggcgtggcg gccgcggagc gtcctgcggg ccgggctcgt cacggtgctg
     3961 ctctatatcg gcgcggcgcg gctgggggag gatgtgctgg cggcgaactg gctgagctgg
     4021 acggcgggcg ttgccctgac ggccgccgcc ctcctgggcc tcgcattcat gaccgggctg
     4081 tccggcacct cccgcgaggc cgtcgtccgc cgggtgaagg cgctccgcgc tgggcggcgg
     4141 gggcggactg ggagggtgtc atga
//
LOCUS       DASUYN010000620         2037 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1298490, whole genome shotgun sequence.
ACCESSION   DASUYN010000620 DASUYN010000000
VERSION     DASUYN010000620.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2037)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2037)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2037
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1298490"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            138..929
                     /locus_tag="VF061_12135"
     CDS             138..929
                     /locus_tag="VF061_12135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670306.1"
                     /translation="MRSWSGLHLSKCYVDCVGDAGDWAIAYHARLRWGPVALGYASLL
                     GRRGPDGPWSASTLRPGPAPTADPGYVAWNTPALRLNVSARSRSEPFGRRLLEGTAGT
                     VDWDCLAPSAEVSLRSGSGPGWSGLGYGERLEVRCPSWRLPIEQLRWGRFLTPTRTVV
                     WIGWWGAEPRTLVFDNGRCQADAEIGDGEVRFGRSRLTLDRQAVVRDADLAEILKPLA
                     RLRALPLAEAARIHETKWLSRGTLHDPTLSEPVDGWVIHELVVFP"
     gene            926..1558
                     /locus_tag="VF061_12140"
     CDS             926..1558
                     /locus_tag="VF061_12140"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX6670307.1"
                     /translation="MSPESVRPPLLEARDVVKSYGRIPVLRGASFEVRPGEILGIVGE
                     NGSGKSTLLRIVVGLLRPSAGTVRLRGRLGYCDQEPLLFPMLTVAEHFSYFASAYGLR
                     DRRQWQDTKRLLLDRFGYARWEHTLAERLSGGTRQKLNLSLALLHEPELLVLDEPYLA
                     FDWETYLRFWDHAAALRAAGRALVVVSHLAHDRARFDRLLSLREGVLECA"
     gene            1555..>2037
                     /locus_tag="VF061_12145"
     CDS             1555..>2037
                     /locus_tag="VF061_12145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670308.1"
                     /translation="MSRVLVAAGMTLRELSRGRLALGLAAAVPLLFFVVAALVSSRRD
                     VAVQLAAAPTESLLNVDERAQSFVFLAVAAAAVIGAFMAASLVQRRVGASRRLVLCGY
                     AAAELIAAKLLVLLGIVAATAAYTGAVVLAVVRPARPGGVLLGLALGCLVYGGYGLLT
                     G"
BASE COUNT          240 a          714 c          736 g          347 t
ORIGIN      
        1 ttcttggccc caccgaccgc accatcacga tcgcttcatc cagccttcac cacggcttcg
       61 cctccactgt cctaccttcg cggtgctcct tctcgacgaa aaccccgtga cgatcagcgg
      121 atcggcgatc ggcgcccatg cggtcctgga gtggtcttca cctgtcgaag tgctacgtgg
      181 actgcgtcgg cgacgcgggt gactgggcca tcgcctacca tgctcggctg cgctggggcc
      241 cggtcgcact cgggtacgcg agcctgctgg gtcgccgggg acccgatggc ccctggtccg
      301 cgtccaccct gcgcccgggc ccggcaccga ccgcggaccc gggctacgtc gcctggaaca
      361 cgcccgcgtt gcgcctcaac gtgtccgcgc gatcacgcag tgaaccgttc gggcggcgcc
      421 tgctcgaggg caccgcgggc actgtggact gggactgtct ggccccgagc gcggaggtca
      481 gcctgcggag cggctcgggc cccgggtgga gcggtctcgg gtatggcgag cggctcgagg
      541 tcaggtgccc ttcctggcgc ttgccgatcg agcagctccg atggggcagg tttctcacgc
      601 cgacgcgcac agtggtctgg atcgggtggt ggggtgcgga gccgaggacc ctggtcttcg
      661 acaacggacg gtgccaggcc gacgccgaga tcggggacgg cgaagtccga ttcggccgct
      721 cgcggcttac cctcgaccgg caggccgtgg tgcgggatgc ggacctggcc gagatcctca
      781 agccactcgc gcgcctgcgg gcgctgccgc tggcggaagc cgcgcggatt cacgagacca
      841 agtggctgag ccggggcacg ctgcatgacc cgacattgtc cgagccggta gacggatggg
      901 tcatccacga gctggtggtc ttcccgtgag ccccgagtcg gtccggcccc cactcctcga
      961 ggcccgcgac gtcgtgaagt cctatggccg gataccggtg ctgcgcgggg ccagcttcga
     1021 ggtccgcccc ggcgagatcc tcggcatcgt cggcgagaac ggctccggca agagcaccct
     1081 gttgcggatc gtggtggggc tgctgcgtcc gtcggcgggc acggtccgtc tgcggggccg
     1141 cctggggtac tgtgaccagg agccgctgct cttccccatg ctgaccgtgg ccgagcactt
     1201 cagctatttc gcgagtgcct atggcctgcg cgatcgtcgg caatggcagg acacgaagcg
     1261 cctcctgctc gatcgcttcg ggtacgcccg ctgggagcac accctggcgg agcgcctcag
     1321 cggggggacc cggcagaagc tcaacctgtc gctggccctg ctgcacgagc cggagctcct
     1381 ggtcctggac gagccctacc tggcgttcga ctgggaaacc tacctccgat tctgggatca
     1441 tgccgcggcg ctgcgggccg ccggacgggc gctggtcgtc gtctcccacc tggcccacga
     1501 tcgggcgcgc ttcgatcgac tgctgtcgct tcgggaagga gtcctggagt gcgcgtgagc
     1561 cgtgtgctgg tggccgccgg catgaccctg cgggagctgt cccgcggacg gctcgccctg
     1621 gggctcgcgg ccgccgtccc actcctcttc ttcgtggtgg cggccctggt gtcgagccgt
     1681 cgagacgtgg cggtgcagct ggcggccgcg ccgaccgaga gcctgctcaa cgtggacgag
     1741 cgggcgcagt ccttcgtctt cctggccgtt gcggcggccg cggtgatcgg ggcgttcatg
     1801 gccgcgtcgc tggtgcagcg ccgcgtgggc gccagccgcc ggctcgtgct ctgcggctat
     1861 gcggccgccg agctgatcgc cgccaagctc ctggtgctgc tgggcatcgt tgcggccacc
     1921 gccgcctaca ccggggcggt cgtgctcgcc gtcgtgcgtc ccgcgcggcc cggtggagtg
     1981 ctgctgggtc tcgccctcgg ctgcctggtc tacggggggt acggcctcct caccggc
//
LOCUS       DASUYN010000621         3564 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_194022, whole genome shotgun sequence.
ACCESSION   DASUYN010000621 DASUYN010000000
VERSION     DASUYN010000621.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3564
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194022"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1012)
                     /locus_tag="VF061_12150"
     CDS             complement(<1..1012)
                     /locus_tag="VF061_12150"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEX6670309.1"
                     /translation="MPFLDTERQRAAWLILALGVALMYALWPFSTGLVGAPVLYVIMA
                     PIHRWLSRYMPIRAAAGVVIVLGILLVLGPGVSVVGLVATEAQDMATGVIRSPLLARI
                     SRIRVGPYQVGAQLEQIGSQIVSFIGSSALGLIGTATRAGIQLTIAFFGLYYLLVAPG
                     TTWRAVRPFIPFSAASAEILRRRFGDVTVSTLVGTGLTATIQGVAVGLAFWVVGLSNP
                     LFWGVVTVIFAILPVVGSGLVWGPGAAALAMDGRWGAAIGLVIWGIVVVGNVDNVIRP
                     IVFRRWAQVHPFVTVIGAFMGLRYFGLLGLLIGPLAISYFFELIRMYRVEYLEDEDVE
                     VSP"
     gene            1134..2657
                     /locus_tag="VF061_12155"
     CDS             1134..2657
                     /locus_tag="VF061_12155"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX6670310.1"
                     /translation="MTLTDPRLAHDVLPVLLWTAGPDGACDYLNHRWSEFAGRPVADM
                     LGWGWTEGLHPDDRETFQAEYAAAVASRGPIRLEFRLLHQDGEYRWLLGLGEPITGPG
                     GEFLGYGGCSIDITDRRALEQRLTQLDRAGEIAQLAGGIAHDFNNLLTGILGHVALLL
                     DEGTLPDEAREDLAQIRQAADRAANLSRHLLTFSRRPSPAPQSLDVNQVVSGAVSAVR
                     QVVGSAIEVEQDLAAGLEPALADPSQIEQLLVQLAARARSVMPRGGVFRLHTDRAQVD
                     ESLAEQHPALRPGAYVTLQIGYRGPDLDSTALARVFDAPADRNTSDLSSLPTIVRQSG
                     GYLMVDSAPEAGTTFTVYIPRFGPPRAVEAPAGESAGDETILLAEDDAQVRDVTRRAL
                     ERAGYLVLAANDAEAAVAAADRHPGHIHLLITDVVLPRMSGRELAARLAIHRPAIRVL
                     YVSGTSEGAIARHRMLEPGTEFLEKPFSLDRLLRKVRLVLGAKPSEDQATWTQRSLV"
     gene            2633..>3564
                     /locus_tag="VF061_12160"
     CDS             2633..>3564
                     /locus_tag="VF061_12160"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEX6670311.1"
                     /translation="MDPTLTGLIDGLPPGTLAVAAGVGGALALALLVTALVLWRQRRR
                     AEHDAATARGQLRTVTASMREGVIAYDMNLQLSFVNPAFERLTGYPEEDIRDQEFLQY
                     VHPDDRPALAAEWERLAQGGSLRDQEYRVLARGGHVRWSSSSWEPLRDENGRQVGYLG
                     TEFDITERKLAEEAMRQDAELFQALIEVQQAVAAAGLDSQTVMRVIADRGLRLTGATG
                     AVIESIEGDELVPQVHIGTEAPRLRLADSLSGLCVRTGELQRSDDLLSDPRVGHDRYR
                     AIGVRSLLAVPLTDEQRTLGVLKMVSTRPEAFSDR"
BASE COUNT          564 a         1302 c         1233 g          465 t
ORIGIN      
        1 ccggcgacac ctcgacgtcc tcgtcctcca gatactccac ccggtacatc cggatcagct
       61 cgaagaagta tgagatcgcg agcgggccga tgagcagtcc cagcaggccg aagtagcgca
      121 ggcccatgaa cgcgccgatg accgtgacga aggggtgcac ctgcgcccag cggcggaaca
      181 cgatcggccg gatcacgttg tccacgttac cgactacgac gataccccag atcactagac
      241 cgatcgcggc gccccagcgg ccgtccatcg cgagcgcggc cgcgcccggt ccccacacca
      301 gcccactgcc gaccaccggc aggatggcga agatcaccgt caccacgccc cagaacagtg
      361 ggttggacaa gccgaccacc cagaaggcca ggccaaccgc gactccctgg attgtggcgg
      421 tgagcccggt gccgaccagc gtggagaccg tcacgtcgcc gaaccggcgg cggaggatct
      481 ccgcgctcgc ggcggagaac ggaatgaacg ggcgcaccgc ccgccaggtg gtccccggcg
      541 cgaccaggag gtagtagagc ccgaagaagg cgatggtgag ctggatgccg gcccgggtgg
      601 ccgtgccgat caggcccagc gcgctcgacc cgatgaagga gacgatctgg gaaccgatct
      661 gctccagctg ggcgccgacc tggtagggac cgacccggat gcggctgatc cgggccagga
      721 gggggctccg aatcacgccc gtcgccatgt cctgggcttc ggtggccacg agcccgacga
      781 ccgaaacgcc gggccccagg accagcaaaa tgcccagtac gatgaccacc cccgccgccg
      841 cccggatcgg catgtaccgg gaaagccagc ggtggatggg cgccatgatc acgtagagga
      901 caggggcacc caccagcccg gtgctgaagg gccacagggc atacatcaac gcgacgccga
      961 gggccaggat gagccacgcc gcccgctgcc gctcggtgtc caggaaaggc atccgaaaag
     1021 agtatgccgc aaaggcttcc gccgccagca cgactcccgg gccgcccttg cccccgccgc
     1081 acccggccgc gagattggct ctttcaccac cagcactggc aggactgatt ggcatgacct
     1141 tgactgatcc gcgcctggcc cacgacgtcc ttcccgttct cctgtggacc gcgggacccg
     1201 acggcgcgtg cgactatctg aaccaccgct ggtccgagtt cgccggccgt cccgtggcgg
     1261 acatgctcgg ctgggggtgg accgaagggt tgcacccgga cgaccgggag accttccagg
     1321 cggagtacgc ggcggcggtg gcctcacgcg gccccatccg cctcgagttc cggttgctgc
     1381 accaggacgg ggagtaccgc tggctactcg ggctcgggga gcccatcacc ggcccgggcg
     1441 gcgagttcct gggctacggc gggtgcagca tcgacatcac cgaccggcgg gccctggagc
     1501 agcggctgac ccagctcgac cgggcgggcg agatcgccca gctcgccggc gggatcgcgc
     1561 acgacttcaa caatctgctc accgggatcc tgggccacgt ggccctgctg ctggacgagg
     1621 gcacgctccc ggacgaggcc cgcgaggacc tggcgcagat ccggcaggcg gccgaccgcg
     1681 cggcgaacct ctcgcgccac ctcctcacct tcagccgccg gccttctccc gcaccccaat
     1741 cgctggatgt caaccaggtg gtgtcgggcg ccgtgagcgc ggtgcgccag gtcgtgggca
     1801 gcgcgatcga ggtggagcag gatctcgccg cgggactgga gccggcgctg gccgatccgt
     1861 cccagatcga gcagctcctg gtgcaactgg ccgcgcgcgc ccgctccgtg atgccccgcg
     1921 gcggcgtctt ccgcctgcac acggaccggg cacaggtgga cgagtcgctc gccgagcagc
     1981 atcccgcgct ccggccgggc gcctacgtga cgctccagat cggctatcgc ggcccggacc
     2041 tcgactccac cgcgctggcg cgggtattcg atgcgccggc ggaccgcaat acgagcgatc
     2101 tctcgtcgct gccgacgatc gtgcggcaga gcggggggta cctcatggtg gacagcgcgc
     2161 ccgaggcggg cactaccttc accgtctaca tcccccggtt tggcccgccc cgggcggtgg
     2221 aggcgcccgc cggcgagtcg gccggggacg agaccatcct gctggccgaa gacgacgcgc
     2281 aggtccggga cgtgacccgg cgtgcgctgg agcgcgccgg ctacctcgtt ctggccgcga
     2341 acgacgcgga ggccgcggtg gccgcggccg accgccaccc cgggcacatc cacctgctga
     2401 tcaccgacgt ggtgcttccc aggatgagcg gccgggagct cgccgcgcgg ctcgcgattc
     2461 accgcccggc gatccgggtg ctgtacgtgt ccggcaccag cgagggcgcc attgcccgcc
     2521 accggatgct ggagccgggc acggagttcc tggaaaagcc gttctcgctc gaccgcttac
     2581 tgcggaaggt ccgcctggtg ctcggcgcca agccttccga ggaccaggcg acgtggaccc
     2641 aacgctcact ggtctgatcg acggtctgcc gcccggcacg ctggccgtcg ccgccggagt
     2701 cggcggggca ctggccctcg ccctgctcgt caccgccctg gtcctgtggc ggcagcggcg
     2761 ccgcgccgag cacgacgccg ccaccgcgcg cggccagctc cgcacggtca ccgccagcat
     2821 gcgcgagggc gtgatcgcgt acgacatgaa cctgcagctc agcttcgtga atcccgcgtt
     2881 cgagcggctc accggctacc ccgaggagga catccgcgac caggagttcc tccagtacgt
     2941 ccaccccgac gaccggccgg cgctggcggc ggagtgggag cgcctggcgc agggcggttc
     3001 gctccgcgac caggagtacc gggtgctggc aaggggcggt cacgtgcggt ggtcctccag
     3061 ctcctgggag ccgctgcgcg acgagaacgg ccggcaggtg ggctacctcg gcaccgagtt
     3121 cgacatcacc gagcggaagc tggccgagga ggccatgcgg caggatgccg agctgttcca
     3181 ggcgctgatc gaggtccagc aggcagtggc ggccgcgggt ctggattccc agaccgtcat
     3241 gcgggtgatc gccgaccggg gtctccggct caccggcgcg accggcgccg tgatcgagtc
     3301 catcgagggc gatgagctgg tgccccaggt gcacatcggc accgaggcgc cccggctccg
     3361 tctcgccgac agcctgtccg gcctgtgcgt ccgcaccggt gagctccagc gctcggacga
     3421 cctgctctcc gaccccagag tcggccacga ccgctaccgc gccatcgggg tgcgctcgct
     3481 gctcgcggta ccactcaccg acgagcagcg caccctgggg gtcctgaaga tggtctccac
     3541 ccgtcccgag gccttcagcg accg
//
LOCUS       DASUYN010000622         2852 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1960355, whole genome shotgun sequence.
ACCESSION   DASUYN010000622 DASUYN010000000
VERSION     DASUYN010000622.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2852)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2852)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2852
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1960355"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            117..1337
                     /locus_tag="VF061_12165"
     CDS             117..1337
                     /locus_tag="VF061_12165"
                     /inference="COORDINATES: protein motif:HMM:NF017743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAM domain-containing protein"
                     /protein_id="HEX6670312.1"
                     /translation="MTPVRILRLATGGDGVGRLEDGRTVFVPRSAPGDLVELTRVRQY
                     RRYARARVARVLEASPQRVAPRCPHYVHDDCGGCQLQHLGSPAQREARRTIVGDALRR
                     IARLDVVDPEIVPAAADFDYRTKITLSVDDGGNRIGLHPLDRPDRAFDLVRCHITTPE
                     LMSLWAELSGLRELLPLGLRQIVLRLDRRGGRHVVLVTGDDASWSGTALHRELEARTA
                     GATLWHQPEGGEPRAVAGADQSFPATVFEQVHPDMGDRVRAQAVAALGRVERRHVWDL
                     YAGIGETTAALAVAGASVESVESDPRAVAEAEARGPEAKRHVGRAERLVTRLGAPDLV
                     VTNPPRIGMDERVTAALARAAPRRIVYISCDPATLARDLTRLPGFTLTSALAFDLFPQ
                     TAHVETVAVLDRAS"
     gene            1334..1849
                     /locus_tag="VF061_12170"
     CDS             1334..1849
                     /locus_tag="VF061_12170"
                     /inference="COORDINATES: protein motif:HMM:NF012584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HEX6670313.1"
                     /translation="MRYFVTVAGREIEVEVDGDRVTAGGATLVTSLRAIVGTPSRQLL
                     LDGRPTVLTLRSSGRGRWTVGVGGDRWDVEVVDERTRHIRSLTAGADTARGPTTLRAP
                     MPGLVVRVLVEAGQEVAGGAGVVVLEAMKMENELKVPAAGVVAAVRVRAGEPVEKGQV
                     LVELRERSPSP"
     gene            1926..2378
                     /gene="rplM"
                     /locus_tag="VF061_12175"
     CDS             1926..2378
                     /gene="rplM"
                     /locus_tag="VF061_12175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HEX6670314.1"
                     /translation="MKTFTATPEDITHEWHLVDAAGVPLGRLASVVAQLIRGKHKPTY
                     TPHMDGGDFVIVVNAEKVRLTGRKEENKTYFSHTGYMGHERHTRARDMLAKHPDRVIE
                     KAVFGMLPKTSLARQKLRGKLKVYAGAEHPHAAQQPKPFSVTPSKASA"
     gene            2375..2776
                     /gene="rpsI"
                     /locus_tag="VF061_12180"
     CDS             2375..2776
                     /gene="rpsI"
                     /locus_tag="VF061_12180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HEX6670315.1"
                     /translation="MTAAPEFRWRAVGRRKTSVARVYLTPGTGKWDINGRTLGDYFPR
                     PSLVQHIQQSFTATDTLGAFDVRAHVDGGGQAGQAGALRLAIARALVEADGQHRTKLR
                     AAGLLTRDPRAVERKKPGRPGARKRFQFSKR"
BASE COUNT          395 a         1015 c         1064 g          378 t
ORIGIN      
        1 atcgcggccg cgatggccga ggaggagtcc cgggccgtgc gccggcctcc ggtctcgggc
       61 gatggccggc cggaggcctc ccactggctc cagcgggcga ggctcgaggg cctccagtga
      121 ctccggtcag gatccttcgg ctggccaccg gcggcgacgg ggtcggacga ctcgaggacg
      181 gccgcaccgt cttcgtgccc cggagcgcgc cgggcgacct cgtcgagctg acccgggtcc
      241 ggcagtaccg ccgctacgcg cgggcgcggg tggcccgggt gctcgaggct tcgccgcagc
      301 gggtggcgcc gcgctgtccc cactacgtcc acgacgactg cggcggctgt cagctccagc
      361 acctcgggtc cccggcccag cgggaggcgc gccggacgat cgtcggcgac gcgctgcggc
      421 gcatcgccag gctcgacgtc gtcgatcccg agatcgtgcc cgcggcggcg gacttcgact
      481 accgcaccaa gatcaccctc tcggtggacg acggggggaa caggatcggg ctgcacccgc
      541 tggaccgtcc cgaccgcgcc ttcgatctgg tccgctgcca catcaccacc cccgagctga
      601 tgtcgctctg ggccgagctg agcgggttgc gcgagctgct gcccctcggg ctccggcaga
      661 tcgtgctccg tctggaccgt cgcgggggac ggcacgtggt gctggtgacc ggggatgacg
      721 ccagctggag cggcacggcg ttgcaccgcg agctggaggc gaggactgcg ggcgccaccc
      781 tctggcacca gccggagggc ggggagcccc gcgcggtggc cggagccgac cagagctttc
      841 cggcgacggt cttcgagcag gtgcatcccg acatgggcga ccgggtgcgg gcgcaggccg
      901 tcgccgcgct gggccgggtc gagcggcggc acgtctggga cctctacgcc ggcatcggcg
      961 agaccaccgc cgcgctggcg gttgccggcg cttcggtgga gagcgtcgag tcggaccccc
     1021 gcgccgtggc ggaagccgag gctcgcggac cggaagcgaa gcgccacgtc ggtcgggccg
     1081 agcggctggt gacgagactc ggcgccccgg acctggtcgt caccaatccg ccccgcatcg
     1141 ggatggacga gcgggtgacg gcggcgctgg cgcgggccgc gccacggcgc atcgtgtaca
     1201 tctcctgcga ccccgcgacc ctggcgcggg atctcacccg gctgccgggg ttcacgctga
     1261 cctccgctct ggccttcgac ctcttccccc agaccgcgca cgtggagacg gtggccgtac
     1321 tggaccgtgc ctcatgaggt acttcgtcac cgtcgcgggc cgggagatcg aggtcgaggt
     1381 ggacggcgat cgggtgacgg ccggcggcgc caccctggtg accagcctcc gggcgatcgt
     1441 ggggaccccg tcccgccagc tcctcctcga cggccgtccg accgtgctca cgcttcggag
     1501 cagcggccgt ggccggtgga ccgtcggcgt cggcggagat cggtgggatg tcgaggtggt
     1561 ggacgagcgg actcgccaca tccggagcct caccgcgggc gccgacacgg cgcgcggccc
     1621 gacgacgctg cgcgccccca tgccgggtct ggtggtccgg gtactggtgg aggcgggaca
     1681 ggaggtcgcc ggcggggcgg gggtggtggt gctcgaggcc atgaagatgg agaacgagct
     1741 caaggtgccg gcggcggggg tggtggctgc ggtgcgggtg cgggcgggcg agccggtgga
     1801 gaagggccag gtcctggtgg agcttcgcga gcgctcaccg tccccttgac cctgcccgtg
     1861 accgccggct atcttgtgag tctgtttcgg tttgaccctg ttcgacctcc aagacggcag
     1921 cgcgcatgaa gacctttacg gccacgcccg aagacatcac ccacgagtgg catctcgtgg
     1981 atgcggccgg cgtcccgctc ggccgcctgg ccagcgtcgt ggcccagctc atccggggca
     2041 agcacaagcc cacctacacg ccgcatatgg acggtggtga cttcgtcatc gtggtgaacg
     2101 ccgagaaggt gcggctcacc ggccggaagg aggagaacaa gacctacttc tcccacaccg
     2161 gctacatggg ccacgagcgg cacacccggg cgcgggacat gctggccaag cacccggacc
     2221 gggtcatcga gaaggcggtc ttcggcatgc tgcccaagac ttcgctggcg cggcagaagc
     2281 tgcgcggcaa gctcaaggtc tacgccggcg cggagcaccc gcacgcggcc cagcagccca
     2341 agccgttctc cgtcactccc tccaaggcga gcgcatgacc gcagcacccg aattccgctg
     2401 gcgcgccgtc ggccggcgca agaccagcgt ggcccgggtc tacctgaccc cgggcaccgg
     2461 caagtgggac atcaacggcc gcacgctggg cgactacttc ccccgtccct cgctggtgca
     2521 gcacatccag cagtccttca ccgccaccga cacgctcggc gcgttcgacg tccgagccca
     2581 cgtggacggc ggcgggcagg cggggcaggc cggggcactc cggctcgcca tcgcgcgggc
     2641 gctggtcgag gccgacgggc agcaccggac caagctccgg gccgccgggc tcctcacgcg
     2701 cgatccgcgg gccgtcgagc gcaagaagcc gggccggccg ggcgcgcgca agcgcttcca
     2761 gttctcgaag cgctagacgc gcagtgtcac cctgagcgca gcgaaggggg catgccgcag
     2821 ggcagggctc cttcgcttcg ctcaggatga cc
//
LOCUS       DASUYN010000623         2110 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1960413, whole genome shotgun sequence.
ACCESSION   DASUYN010000623 DASUYN010000000
VERSION     DASUYN010000623.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2110
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1960413"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            157..339
                     /locus_tag="VF061_12185"
     CDS             157..339
                     /locus_tag="VF061_12185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670316.1"
                     /translation="MSETERLGKLRHDLSNPLSALLAEVQLLLLNESQIDPETLTSLR
                     EIEALAIRMRTMLREI"
     gene            complement(274..>2110)
                     /locus_tag="VF061_12190"
     CDS             complement(274..>2110)
                     /locus_tag="VF061_12190"
                     /inference="COORDINATES: protein motif:HMM:NF014052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="stage II sporulation protein M"
                     /protein_id="HEX6670317.1"
                     /translation="SRMPTRRQTPPDYRQRLFVETPEHVTLDLEIAGVGSRALAAIID
                     TLILVAVALATVLALGIIAGFGVTIGSIGGAVLLLAGFAVWNGYFILFEGLRQGQTPG
                     KRIIGIRVVGDTGNAVGLGAAAARNLLRIADFLPPPYLIGALLVALHPRGKRLGDIVA
                     GTVVARDRPAEASVRHSAGARPSAPRAVAQIPELTDAEFHLLAAFTRRQAELTQPARL
                     RLATAIAARLADHPAPPGVTQLDHLLELHRVERGRREGSLIRRGAAAAAAFAARKRGR
                     WDEFRVLAERAARHGLDSFASHELPDFAARYREVAADLARARTYGVDDDTLQYLERLA
                     AAGHNALYRDERGTWRRMWEVLARECPAAIRQAAGYVLVAGLAFMLPAAAGYLVIREQ
                     PALAPDVLPEVVIERADAGTERIAEGRRYVDVALEDRPLMASAIISNNVRVAIACFAG
                     GVFLGVGSLVLLGYNGLTIGAAAGHFANQGLLGYLLEFILGHGILELFAIWVAGAAGF
                     MLGRSVVAPGDLSRGEALVLSGRAAVRMVGGAAIMLVAAGLIEGFVSASAGDVGLRAA
                     ASAVSLAFLVAYLLNGRPRSGGAGSDLPQHRAHPDGQRLDLPQTG"
BASE COUNT          330 a          783 c          745 g          252 t
ORIGIN      
        1 gagggggcgc gcagggttgt gaggggagtt gtccggccga ttccaagaag cgattcaact
       61 tagagcgctc cccgtgccca gtcaagagcc ccattgcaga agtctgccgg gcgcacgatc
      121 ttggctcact ccgcaccacc ctcaagccga gccgagatgt ccgaaaccga gcgcctgggc
      181 aagctgcggc acgacctctc caacccactc tcggccctgt tggccgaggt ccagttgctg
      241 ctgctcaacg agtcgcaaat cgaccccgag acgttaacca gtctgcggga gatcgaggcg
      301 ctggccatcc ggatgcgcac gatgctgcgg gagatctgag ccggccccac ccgaccgggg
      361 cctgccattg agcagatacg ccaccaggaa ggccaggctc acggcgctcg ccgccgcccg
      421 gagcccgacg tcccccgcgc tcgccgacac gaatccctcg atcaaccccg ccgccaccaa
      481 catgatcgcc gcgcccccga ccattcgcac cgcggcccgt ccgctcagca ccagggcctc
      541 gccccgggac aggtcgcccg gcgccaccac cgagcgcccg agcatgaatc ccgccgcgcc
      601 ggcgacccag atggcgaaca actccaggat cccgtggccc aggatgaact ccagcagata
      661 ccccagcaga ccctggttgg cgaagtgacc ggccgccgcg ccgatcgtga ggccgttgta
      721 ccccaggagc accagagagc cgacccccag gaacaccccg ccggcgaagc aggcgatcgc
      781 gacccggacg ttgttgctga tgatcgccga ggccatcagg gggcggtcct ccagggccac
      841 atccacgtaa cgcctgccct cggcgatccg ttccgtgccg gcgtcggccc gctcgatcac
      901 gacctcgggc agcacgtccg gggcgagggc cggctgctcc cggatgacca ggtatcccgc
      961 ggcggccggc agcatgaagg cgaggccggc gaccaggacg tagccggcgg cctggcggat
     1021 cgccgcggga cactcccgcg ccaggacctc ccacatccgc cgccaggtgc cccgctcgtc
     1081 ccggtagagg gcgttgtgcc ccgcggcggc cagccgctcc agatactgga gggtgtcgtc
     1141 gtccacacca taagtgcgcg cgcgggccag gtcggcggcc acctcccggt accgggcggc
     1201 gaagtcgggc agctcgtggg aggcgaagct gtcgaggccg tggcgggccg cgcgctcggc
     1261 gaggacccgg aactcatccc accggccgcg cttgcgggcg gcgaacgccg cggcggcggc
     1321 cgcgccgcgc cggatcaacg agccctcccg gcggccgcgc tccacccggt gcagctccag
     1381 caggtggtcc agctgggtga ctcccggcgg ggcggggtgg tcggccaggc gggcggcgat
     1441 cgcggtcgcg agtcggagcc gcgccggctg ggtgagctcc gcctggcggc gggtgaacgc
     1501 cgccagcagg tgaaactccg cgtccgtcag ctcggggatc tgcgccaccg cccgcggcgc
     1561 cgacggccgg gccccggcgg agtgccggac cgaggcttcg gccggccggt cccgggcgac
     1621 gaccgtcccg gccacgatgt cgcccagtcg cttgcccctg gggtgcagcg ccacgagcag
     1681 ggcgccgatc aggtagggcg gggggaggaa gtcggcgatg cgaagcaggt tccgcgcggc
     1741 cgcggcgccg agccccacgg cattcccggt gtctccgacc acccggatcc cgatgatgcg
     1801 cttgccgggg gtctgcccct ggcgcaggcc ctcgaacagg atgaaatagc cgttccagac
     1861 ggcgaacccg gccagcagga gcaccgcccc gccgatcgat ccgatggtga ccccgaagcc
     1921 ggcgatgatg ccgagggcga gcacggtggc cagcgccacg gccaccagaa tgagcgtatc
     1981 gatgatggcg gcgagcgccc gtgaccccac gcccgcgatc tcgaggtcga gggtgacgtg
     2041 ctcgggcgtc tccacgaaga gtcgctgacg gtagtcgggc ggggtctgcc ggcgcgtcgg
     2101 catgcgcgat
//
LOCUS       DASUYN010000624         3036 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_636764, whole genome shotgun sequence.
ACCESSION   DASUYN010000624 DASUYN010000000
VERSION     DASUYN010000624.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3036
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_636764"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..335)
                     /locus_tag="VF061_12195"
     CDS             complement(<1..335)
                     /locus_tag="VF061_12195"
                     /inference="COORDINATES: protein motif:HMM:NF013015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670318.1"
                     /translation="MSARILHVDLDAFFVEVCRQRHPELRGVELLVVGGRRDQRGVVQ
                     SASYGARKFGIHAGMPIAQAVRLCPAATFFQGSFIHYRDASRAVRAVLQRFSPTVVMA
                     SLDEAYLDFA"
     gene            377..895
                     /locus_tag="VF061_12200"
     CDS             377..895
                     /locus_tag="VF061_12200"
                     /inference="COORDINATES: protein motif:HMM:NF012436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin"
                     /protein_id="HEX6670319.1"
                     /translation="MSKTMQDALNQQMKHEFYSSYLYLSMSAYCDGANLPGLARWMRA
                     QAQEENKHAMKIFDHLLDRGGKVELHELGRPPAEFASPRDVFEQAHQHEQQVTAAINK
                     VYGLAMDERDFASRVFLDWFVQEQVEEEKTSGLLAEQLRMVGEDRPGLLMLDRELGQR
                     KSVGAEPAADPT"
     gene            892..1788
                     /locus_tag="VF061_12205"
     CDS             892..1788
                     /locus_tag="VF061_12205"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX6670320.1"
                     /translation="MSVGPAAFLGLGAIGAPMAARLARGTRLVVWNRTRARADDFARA
                     HRVRSAASPREAAAGADVVLTCLPTSREVEALLDGADGLLAGLVPGALLIDCTSGDPA
                     GSRRIAARLAQRGVAFADAPVSGGTKRAEAGTLTIMVGADPPVFDRARPVLALMGSRI
                     ERVGPVGAGHALKAVNNALLAANILAVGEGLAALVKAGVPPRTALDVINDSSGRSFVS
                     ETLVPERVLTGAWPRTFRLALLEKDVGIARELLRATGVEGPVVDLTSELFSRARASLG
                     ESADHLEAIRLIETQAGVEIRG"
     gene            1852..2319
                     /locus_tag="VF061_12210"
     CDS             1852..2319
                     /locus_tag="VF061_12210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670321.1"
                     /translation="MSDWGSTNRLPARVALVDGVVLDGDLHLLTRPAYPQPGGSETPL
                     EMLNRPDPFFALTLSEGDVALVPKARVLEITCQEDVPPPDPDRVTAAKVVDLEVVLPD
                     GARHQGVVTLELPPGRRRTLDFLNGEGVFFALWADGRTRYINKLHVRFIRPLD"
     gene            2328..>3036
                     /locus_tag="VF061_12215"
     CDS             2328..>3036
                     /locus_tag="VF061_12215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670322.1"
                     /translation="MARLDRFIQVMHEQRADALQLTTGQPASLVTSGATRAITKDPLS
                     DGQIVGLVREIAGEAASRLGSGAPVGFGYQAPSGEVRVELTPAAEGARAVLRPARAAS
                     TAAPAPRGPDLAEARAQMEGLLRLLVEAAASDLHLRAGQPPLLRRHGELVREPVEPIA
                     PERLETLLTSIMTPREIGEYREGGDTDWAYEIEGLARFRCNAGRERLGPFAVFRIIPT
                     KILTADELGLSKEVQNLA"
BASE COUNT          439 a         1091 c         1089 g          417 t
ORIGIN      
        1 gcgaagtcga gataggcctc gtccagggag gccatcacca cggtgggcga gaaacgctgg
       61 agtaccgcgc gcaccgcccg ggaggcgtcc cggtagtgaa tgaaggagcc ctggaagaag
      121 gtggcggcgg ggcagagccg caccgcctgt gcgatgggca tcccggcgtg gatgccgaat
      181 ttgcgggctc cgtaggaggc cgactgcacc acgccgcgct ggtcccgccg gccaccgacc
      241 accagcagct cgaccccgcg cagctcgggg tgccgttgcc ggcagacctc cacgaagaag
      301 gcgtcgagat ccacgtggag aatgcgggcg ctcatgctat cttctccgca cccacggacc
      361 ggagctcaag ccgatgatga gcaagacgat gcaggacgct ctgaaccagc agatgaagca
      421 cgaattctac tcctcgtacc tgtacctctc aatgtcggcg tactgcgatg gcgccaattt
      481 gccgggcctc gcccgctgga tgcgggccca ggcgcaggag gaaaacaagc acgccatgaa
      541 gatcttcgat cacttgctgg atcgcggcgg caaggtggag ctgcacgagc tgggccggcc
      601 cccggccgag ttcgcgtccc cgagggacgt cttcgagcag gcgcaccagc acgagcagca
      661 ggtcaccgcc gccatcaaca aggtctatgg gctcgccatg gacgagcgcg acttcgccag
      721 ccgggtgttc ctcgactggt tcgtgcagga gcaggtggag gaagagaaga ccagcggcct
      781 cctggcggag cagctccgca tggtgggcga ggatcgcccc ggcctgctca tgctcgaccg
      841 cgagctcggc cagcggaaga gcgtgggggc cgagccggcg gcggacccga cgtgagcgtg
      901 gggccggccg ccttcctcgg acttggcgcc atcggagcgc cgatggcggc gcggctcgcg
      961 cgcggcaccc ggctcgtcgt gtggaaccgc acccgggcgc gggccgacga cttcgcccgc
     1021 gcgcaccggg tccggagcgc ggccagcccg cgcgaggcgg cggcgggcgc ggatgtcgtc
     1081 ctcacctgcc tcccgacctc gcgcgaggtg gaagcgctcc tggacggcgc ggacgggctc
     1141 ctcgctggac tcgtgccggg cgccctcctc atcgactgca cctccggcga cccggccggg
     1201 tcgcggcgga tcgccgcgcg gctggctcag cgtggggtgg ccttcgcgga cgcgccggtc
     1261 agcgggggga ccaagcgtgc ggaggcgggt acgctcacga tcatggtcgg cgcggaccca
     1321 ccggtcttcg accgggcgcg ccccgtgctc gccctgatgg gcagccggat cgagcgcgtc
     1381 ggcccggtcg gcgcgggcca tgcgctgaag gcggtgaaca acgccctgct cgcggcgaac
     1441 atcctggcgg tgggggaggg cctcgccgcg ctggtgaaag ccggcgtgcc tccgcgcacc
     1501 gcgctcgacg tcatcaacga ttccagcggt cgttccttcg tgagcgagac cctggttccc
     1561 gagcgcgtgc tgacgggcgc gtggccgcgc accttccgcc tggcgctgct ggagaaggac
     1621 gtgggcatcg ccagggagct gctccgggcg acgggggtcg agggcccggt ggtggacctc
     1681 accagcgagc tcttcagccg ggcgcgcgca tccctcggcg agtcggccga ccatctcgag
     1741 gcgatccggc tcatcgaaac gcaggccggg gtcgagatcc ggggctgacc ggaccacttg
     1801 ccgcctctct ctcgctcggt cactttccgc acctatgccc tgccagctcc catgagcgac
     1861 tggggttcga ccaatcgact gcccgcccgc gtcgccctgg tggacggagt cgtgctcgac
     1921 ggtgacctcc atctcctgac ccgcccggcc tatccccagc ccggcggctc ggagacgccg
     1981 ctcgagatgc tcaaccggcc ggacccgttc ttcgccctga cgctgtccga gggagacgtc
     2041 gcgctggtgc ccaaggcgcg ggtgctggaa atcacctgcc aggaggacgt gccgccgccc
     2101 gatccggacc gggtcaccgc cgccaaggtg gtggacctgg aggtggtgct gcccgatggc
     2161 gcgcggcacc agggcgtggt gaccctcgag ctgccgcccg gccggcgtcg cacgctcgac
     2221 ttcctgaacg gcgagggcgt cttcttcgcc ctctgggccg acggtcgcac ccgctacatc
     2281 aacaagctgc acgttcgctt catccgtcct ctggactgag acgccccgtg gcccgactcg
     2341 accgcttcat ccaagtcatg cacgagcagc gcgccgacgc gctccagctc acgacgggtc
     2401 agcccgcctc gctggtgacc agcggcgcca cccgcgcgat caccaaggac cccctgagcg
     2461 atgggcagat cgtcggtctg gtgcgggaga tcgcgggtga ggccgcctcg cgcctgggca
     2521 gcggcgcgcc ggtcgggttc gggtatcagg cgccgagcgg cgaggtgcgg gtggaactca
     2581 ctccggccgc cgagggggcc cgcgccgtcc tgcgccccgc acgggcggcc tccaccgccg
     2641 cgccggcccc gcgcggcccc gacctggccg aggcccgggc ccagatggaa ggcctgctgc
     2701 gactcctggt ggaggccgcc gcgtccgacc tccacctccg ggcgggccag ccgccgctgc
     2761 tccggcgcca cggcgagctg gtgcgcgagc cggtcgagcc gattgcgccg gagcgactgg
     2821 agacgctgct caccagcatc atgacgcccc gcgagatcgg cgagtaccgc gagggcggcg
     2881 acaccgactg ggcctacgag atcgagggcc tcgcccgctt ccgctgcaac gccgggcgcg
     2941 agcgcctagg gccgttcgcg gtcttccgga tcatcccgac taagatcctc actgccgacg
     3001 agctggggct ctccaaggag gtccagaacc tcgcgt
//
LOCUS       DASUYN010000625         2862 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1739773, whole genome shotgun sequence.
ACCESSION   DASUYN010000625 DASUYN010000000
VERSION     DASUYN010000625.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2862)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2862)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2862
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1739773"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1384)
                     /locus_tag="VF061_12220"
     CDS             complement(<1..1384)
                     /locus_tag="VF061_12220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670323.1"
                     /translation="MGAQESATPIASLGTVHFPISCSRDAQAGFDRGLALLHHMTYPQ
                     AREEFARVVGLEPGCAMAHWGVAMTLFQPLWPTRPGPEDIRRGRTEIRAARSLGAATE
                     RERLFLEAAAGFFREPDSLDYRERVRGWHQGMERVHAAFPEDPEAATWLALATLAVAP
                     AAGVTREHSDRAAELLLPVYRANPNHPGAMHYLIHADDVPGREHESPEIVRRYTSVAP
                     DNPHALHMPTHIYTRLGDWERVVEGNLRAAATALEQPAGEGGRYVWDEFPHAIEYLVY
                     AYLQLGDTSAARVQLRRLQATKSLEPTFKTAFHLASTPARYALERKAWREAMALPPRE
                     PAWLDWDRFAWPEAVTWFARGLGAAHEGRRDRARAAAARLAELEAAAGRSGEPLFVRQ
                     IAVLRLGVEGWTAHAQGHADSALALLRQAAALEATTPKPAVTPAPTLPAQELLGDLLL
                     EQGRPKEAVAA"
     gene            complement(1472..2518)
                     /locus_tag="VF061_12225"
     CDS             complement(1472..2518)
                     /locus_tag="VF061_12225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670324.1"
                     /translation="MRPIRRRLVRDLHSGAQLDLFLVSAVASVLLIRFYLRLTGYPQV
                     GGETLHVAHVLWGGLLMLAALVLLLGYLGRASRRWAALLGGVGFGTFIDEVGKFVTRD
                     NDYFYRPAVAVIYVVFVLAYVAMRSIHRRQAPTSEEYVVNALQELEEAARHDLQREER
                     ERALHYLARAKPGDPLAEGLTGLIHGLHEVPSRPAGRVERAGAALLQQYRLLTRRPVF
                     WRALVVFFVAQVLVKLAHAAILIWHPDAGTSLFARVAFMSRRIDDYALPEWLQLGSSL
                     LSAAFVGAGILALRRSHQAALRLFQRSILISVFVTQVFMFYRSQWEALVVLGFNLLVL
                     LALGYMRAHEEEGN"
     gene            2619..>2862
                     /locus_tag="VF061_12230"
     CDS             2619..>2862
                     /locus_tag="VF061_12230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670325.1"
                     /translation="MARHSVVPRIFLSAVLLAAAGCSTSREETGNEDEVAPAARVPGP
                     ESGGLEGTSWRLVKFEGGDATVLTTADPSKYTFTFGS"
BASE COUNT          440 a         1050 c          989 g          383 t
ORIGIN      
        1 acgccgccac cgcctccttc gggcgtccct gttccagcag cagatcgccg agcagctcct
       61 gggcggggag cgtgggagcg ggcgtgacgg cgggcttcgg cgtcgtcgct tccagcgctg
      121 ccgcctgccg gagcagcgcc agcgccgagt cggcgtgccc ctgggcgtgc gccgtccacc
      181 cctcgacgcc cagccgcagc acggcgatct gccgcacgaa gagcggctcg cccgatcgcc
      241 cggccgcggc ttccagctcg gccaacctgg cggcggccgc acgagctcga tccctccgtc
      301 cctcgtgcgc cgcaccgagc ccccgcgcga accacgtcac cgcctccggc cacgcgaaac
      361 ggtcccagtc gagccaggcc ggctcccgcg gcggcagcgc cattgcctcg cgccacgcct
      421 tccgctccag cgcgtagcgc gccggcgtgg aggccaggtg gaacgcagtc ttgaacgtcg
      481 gctccagcga cttcgtggct tggagcctgc gcagttggac gcgcgctgcg ctggtgtcgc
      541 ccagctggag ataggcatag accaggtact cgatcgcgtg gggaaactcg tcccacacgt
      601 accgcccgcc ttcccccgcc ggctgctcca gcgcagtcgc cgccgcccgg aggttcccct
      661 ccacgacccg ctcccagtcg ccgagccggg tgtagatgtg ggtcggcatg tgcagcgcgt
      721 gcgggttgtc cggcgcgacg ctcgtgtacc gccgcacgat ctcgggcgat tcgtgctccc
      781 ggccgggcac gtcgtccgcg tgaatcaggt agtgcatggc gccgggatga ttcgggttcg
      841 cccgatacac cggcagcagc aactcggcgg ctcgatcgga gtgctccctc gtcacgcccg
      901 ccgccggcgc gaccgcgagc gtggcgagcg ccagccacgt cgctgcctcc ggatcctcgg
      961 gaaaggccgc gtgtacgcgc tccatgccct ggtgccagcc gcggacccgc tcccggtagt
     1021 cgagcgagtc cggctcccgg aagaaacccg ccgccgcttc gaggaacagc cgctcgcgtt
     1081 cggttgccgc gccgagcgac cgggcggcgc ggatctccgt ccggccgcgc cggatgtcct
     1141 ccggacctgg gcgggtcggc cagagcggct ggaacaacgt catcgccact ccccagtgcg
     1201 ccatcgcgca gcccggctcg agcccaacca cccgggcaaa ctcctcccgc gcctgggggt
     1261 aggtcatgtg gtgcagcagc gccagcccgc ggtcgaagcc ggcctgcgcg tccctggagc
     1321 aggagatcgg aaagtggacc gtgccgagac ttgcgatggg agtggcggac tcctgcgccc
     1381 ccatcccggc cgcgcacccg accgccaaag tggcgagtcc cgctgatgct ctttgcctca
     1441 tcatatgccg taccgcggcg atccagcgca tctagttacc ctcctcttcg tgcgcccgca
     1501 tgtacccgag cgccagcagc accagcaggt tgaaccccag aaccaccaac gcctcccact
     1561 gcgagcgata gaacatgaac acctgggtca cgaacaccga gatcaggatc gagcgctgga
     1621 acagccgcag ggccgcctgg tgggagcgcc ggagcgcgag gatccccgcc ccgacgaacg
     1681 cggccgaaag cagtgacgag ccgagctgga gccattcggg cagggcgtag tcgtcgatcc
     1741 gccggctcat gaacgccacc cgggcgaaca gcgaggtccc ggcgtcgggg tgccagatca
     1801 ggatcgcggc gtgagccagc ttcaccagca cctgcgcgac gaagaacact accagagcgc
     1861 gccagaacac cggccgccgg gtgagcagcc ggtactgctg cagcagcgcc gccccggcgc
     1921 gctccacccg gccagcgggg cgagacggca cctcgtgcag cccgtggatc aggccggtga
     1981 gcccctcggc cagggggtca ccgggcttcg ccctggcgag atagtggagc gcccgctccc
     2041 gctcctcccg ctggaggtcg tgccgcgccg cctcctccag ctcctggagc gcgttgacca
     2101 cgtactcctc gctggtcggc gcctgccgcc ggtggatcga gcgcatcgcg acataggcga
     2161 ggacgaagac gacgtagatc accgccacgg ccggccggta gaagtagtcg ttgtcccggg
     2221 tgacgaactt ccccacctcg tcgatgaacg tcccgaaccc gaccccgccg agcagcgcgg
     2281 cccagcggcg gctggcccgg ccgaggtacc cgagtagcag gacgagggcg gccagcatga
     2341 gcagaccgcc ccagagcacg tgcgcgacgt ggagggtctc cccgccgacc tggggatagc
     2401 cggtgagccg caggtagaag cggatcagca gcacgctggc gaccgcggag acgaggaaga
     2461 ggtcgagctg ggcccccgag tggaggtccc ggacgagtcg gcgtcttatg gggcgcacct
     2521 gtcgtgaagg ctggcccaag atacttgacg gacccggtag cggctgtacc gtggcagggt
     2581 ggcgcggtcg gatctggtcc gcatggaagg gagtgacgat ggcacggcat tccgtggtcc
     2641 cgcgcatctt cctgtcggcg gtgctgctcg ccgcggcggg ctgcagcacg tcccgtgagg
     2701 aaaccgggaa cgaggacgag gtggcgccgg cagcccgggt gcccggaccg gagtcgggcg
     2761 ggctcgaggg tacctcctgg cgcctggtga agttcgaggg cggcgacgca accgtcctca
     2821 ccaccgccga tccctcgaag tacaccttca ccttcggatc cg
//
LOCUS       DASUYN010000626         2333 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_420012, whole genome shotgun sequence.
ACCESSION   DASUYN010000626 DASUYN010000000
VERSION     DASUYN010000626.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2333
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_420012"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2333
                     /gene="carB"
                     /locus_tag="VF061_12235"
     CDS             <1..>2333
                     /gene="carB"
                     /locus_tag="VF061_12235"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HEX6670326.1"
                     /translation="RTYIEPVTPEWVAKVIERERPDALLPTMGGQTALNVAMALQRDG
                     TLARFGVELIGANERAIRTAEDREEFAAAMRRIGLATPQGRTVRSVDEGLATVEQTGY
                     PAILRPSFTLGGTGGGIAYNLEDFEGMLLRALELSPVHSVLVERSVIGWKEYELEVMR
                     DGADNVVIVCSIENLDPMGVHTGDSITVAPAMTLTDREYQVMRDAAIRIIREIGVAAG
                     GCNIQFAVDPATGEQLVIEMNPRVSRSSALASKATGFPIARIGTKVAVGYRLDELPND
                     ITRTTPASFEPVLDYVVVKIPRFAFEKFPAADPTLTTQMKSVGEVMAIGRTFKEAFQK
                     GLRGLEADRAGWTLGATPADDRLPDDTVESALVALRTPTPERIFQVKRALQLGASVDA
                     IAERSGIDPWFLHQLAELVEAEREWADRRAGGPADGNGASDLRLLRRMKRLGFSDRQL
                     ADLRGTTEAEIRALRHRLGVRPAYKVVDTCAGEFPSSTPYLYSSYDEENEARGVGDRT
                     VVILGSGPNRIGQGVEFDYLCVRAAMAFREMGFRTVMVNSNPETVSTDFDISDVLYFE
                     PLTLEDVLEIVHVERPYGVVVQLGGQTPLRLARALEKEGVRILGTSPEAIDLAEDRGR
                     FEALTRELGVAQPPSGTAFSVEEALAVAGRIGYPVLVRPSYVLGGRAMEIVYDDTSLR
                     SYFARAARVAPEHPVLIDSFLEDAFEADVDAIADGTRCVIGGVMQHIEDAGIHSGDSA
                     CVLPPYLITEAQVDEMRAHTRAFAERLGVVGLINVQYA"
BASE COUNT          347 a          799 c          845 g          342 t
ORIGIN      
        1 cgcacctaca tcgagccggt gacgccggag tgggtggcca aggtgatcga gcgggagcgg
       61 cccgacgcgc tgctccccac gatgggcggc cagaccgcgc tcaacgtggc gatggccctg
      121 cagcgggacg ggacgctggc ccggttcggc gtggagctga tcggcgccaa cgagcgcgcc
      181 atccggaccg cggaggaccg ggaggagttc gcggcggcga tgcggcggat cggcctcgcc
      241 acgccccagg ggcgcacggt gcggagcgtg gacgaggggc tcgccacggt ggagcaaacc
      301 ggctacccgg ccatcctccg cccatccttc accctgggcg gcaccggggg cgggatcgcg
      361 tacaacctcg aggacttcga gggaatgctg ctccgggcgc tggagctgtc gccggtgcac
      421 tcggtgctgg tcgagcgcag cgtcatcggc tggaaggagt acgagctcga ggtgatgcgg
      481 gacggggccg acaacgtggt catcgtctgc tccatcgaga acctcgaccc gatgggtgtc
      541 cacaccggcg actccatcac cgtggcgccc gcgatgacgc tcaccgaccg cgagtaccag
      601 gtgatgcggg acgcggcgat ccggatcatc cgggagatcg gtgtcgcggc cggcgggtgc
      661 aacatccagt tcgcagtgga tcccgccacc ggggagcagc tggtcatcga gatgaacccg
      721 cgggtctccc gctcctccgc gctcgcgtcc aaggccaccg gctttcccat cgcacggatc
      781 gggaccaagg tggcggtggg ctatcgcctc gacgagctcc ccaacgacat cacccgcacc
      841 acgccggcct cgttcgagcc ggtgctggac tacgtggtgg tcaagatccc gcgtttcgcg
      901 ttcgagaaat tccccgccgc cgaccccacc ctcaccaccc agatgaagtc ggtgggtgag
      961 gtgatggcca tcgggcggac cttcaaggag gcgttccaga agggcctgcg cggtctggag
     1021 gccgatcgcg cgggctggac cctcggcgcc acgccggccg acgaccggct gccggacgac
     1081 accgtggaga gcgcgctggt cgccctgcgc acgccgaccc cggagcggat ctttcaggtc
     1141 aagcgcgccc tccagctggg ggcgtcggtg gacgcgatcg cggagcgcag cggcatcgac
     1201 ccctggttcc tgcatcagct ggcggagctg gtggaggccg agcgggaatg ggccgaccgg
     1261 cgggccggcg gaccggcgga tgggaacggc gcctcggatc tccggctcct gcgccggatg
     1321 aagcggctcg ggttctccga ccgccagctc gccgatcttc gcggcaccac cgaggccgag
     1381 atccgggcgc tgcggcaccg gctcggagtt cggccggcgt acaaggtggt ggacacctgc
     1441 gccggggagt ttccgtcctc cacgccctat ctctactcct cctatgacga ggagaacgag
     1501 gcccggggcg tgggtgaccg cacggtcgtg atcctgggaa gcggccccaa ccgcatcggc
     1561 cagggggtcg agttcgacta cctctgcgtc cgcgcggcga tggcgttccg ggagatgggg
     1621 ttccgcaccg tcatggtgaa ctccaatccg gagaccgtct ccaccgattt cgacatctcc
     1681 gacgtgctct acttcgagcc gctcacgctg gaggacgtgc tggagatcgt ccacgtcgag
     1741 cggccgtacg gtgtcgtggt gcagctcggg ggacagacgc cgctccgact cgcgcgggcg
     1801 ctggaaaagg agggcgtgcg catcctcggc acctcgcccg aggcgatcga cctggcggag
     1861 gaccgcgggc gcttcgaggc gctcacccgc gagctgggag tggcccagcc gcccagcggc
     1921 accgccttct ccgtggagga ggcgctcgcc gtggccggcc ggatcggcta ccccgtcctg
     1981 gtgcgcccct cctatgtcct gggcggacgg gccatggaga tcgtgtacga cgacacctcg
     2041 ctccggagct acttcgcgcg ggcggcgcgg gtggctcccg agcacccggt gctgatcgac
     2101 agcttcctgg aggacgcgtt cgaggccgac gtggatgcga tcgcggacgg cacccgctgt
     2161 gtcatcggcg gagtgatgca gcacatcgag gacgccggca tccactcggg tgattccgcc
     2221 tgcgtgctgc cgccctatct catcaccgag gcgcaggtcg acgagatgcg cgcgcacacc
     2281 cgcgccttcg ccgagcggct cggcgtggtc gggctgatca acgtgcagta cgc
//
LOCUS       DASUYN010000627         2121 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1301566, whole genome shotgun sequence.
ACCESSION   DASUYN010000627 DASUYN010000000
VERSION     DASUYN010000627.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2121)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2121)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2121
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1301566"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..520
                     /locus_tag="VF061_12240"
     CDS             <1..520
                     /locus_tag="VF061_12240"
                     /inference="COORDINATES: protein motif:HMM:NF039584.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670327.1"
                     /translation="LPVGRWVEIIEASHASGLRSTVTVMFGHIEEPWELAEHMQVVRA
                     LQERTGGFTEFVPLSFIPYHTLLGRTHGIEEISRAENLKHTAVFRLALGETLNNLQAS
                     WVKMGLDAATEALRWGVNDLGGTLMEESISRMAGSQHGVRLEPAQLIEAARRGGRRPA
                     QRDTLYNIVERY"
     gene            533..1543
                     /locus_tag="VF061_12245"
     CDS             533..1543
                     /locus_tag="VF061_12245"
                     /inference="COORDINATES: protein motif:HMM:TIGR02822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
                     /protein_id="HEX6670328.1"
                     /translation="MVLDAPAPAESRPLALRDVPVPEPGPGEVLLEVRANGICRTDLH
                     VVEGELTEPRLPLVPGHQIVGTVARTGPGVEGVSAGDRVGVPWLGGTDGRCIYCRAGH
                     ENLCEHPTFTGYQRDGGYAEYATARADFVLPVPDGYPDLEAAPLLCAGLIGYRALRMT
                     EIEGLEPPEADVPPRLGLYGFGASAHIVIQVARHLGHEVYVCTRGAEGQEFARELGAK
                     WAGSGGDRPPVELDAAIIFAPAGPLVPAALAAVRPGGTVVCAGIHMSPIPEFGYDLLW
                     GERVVRSVANLTRTDGREFLALAPRIKVHTSVQQFGLEEANEALVELKAGTLRGAAVL
                     VP"
     gene            1540..2004
                     /locus_tag="VF061_12250"
     CDS             1540..2004
                     /locus_tag="VF061_12250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670329.1"
                     /translation="MRVGVAVAAVALMGLAGCGGDDSGSLVKPPPPPEAEQLYGTWTA
                     RQPGGYDLHYVFRRDGTYEHSQGTRQKRREGTYLFEITTRGTMRIRGDTVVLRPRSGT
                     QVRRDPADPEGDYRRPAQRLRQRYTWSVRGTGAEARLTLSIGGGLAVTYRRR"
BASE COUNT          280 a          712 c          848 g          281 t
ORIGIN      
        1 gctgccggtc gggcgctggg tggagatcat cgaggcctcg cacgcgagcg gcctgcgatc
       61 cacggtgacc gtgatgttcg gtcacatcga ggaaccgtgg gagctcgccg agcacatgca
      121 ggtcgtgcgc gcgctgcagg agcgcaccgg cgggttcacc gagttcgtcc ccctgagctt
      181 catcccgtat cacacgctgc tcgggcgcac gcacgggatc gaggagatct cgcgggcgga
      241 gaacctgaag cacacggccg tcttccggct ggccctcggc gagaccctca acaacctcca
      301 ggcgagctgg gtgaagatgg ggctggacgc cgccaccgag gcgctgcgct ggggcgtgaa
      361 cgacctcggc gggaccctga tggaggaatc gatctcgcgg atggcggggt cccagcatgg
      421 ggtgcggctg gagccggcgc agttgatcga ggcggcccgc cggggcgggc gccggccggc
      481 tcagcgggac acgctctaca acatcgtcga gaggtactag ccgttgcgcg ccatggtgct
      541 cgacgcgccc gcgccggcgg agtcgcggcc gctcgcgctg cgcgacgtcc cggtccccga
      601 gcccggtccg ggtgaggtgc tgctggaggt gcgcgccaac ggcatctgcc gcaccgacct
      661 gcacgtggtc gagggcgagc tgaccgagcc gcgcctgccg ctggtcccgg gacaccagat
      721 cgtcgggacg gtcgcgcgga cggggcctgg cgtggagggg gtgtcggcgg gcgaccgcgt
      781 gggggttccc tggctcgggg ggacggacgg gcggtgcatc tactgccgcg ccggccacga
      841 gaacctctgc gagcacccga cgttcaccgg ctaccagcgc gacggcgggt acgcggagta
      901 cgcgaccgcg cgcgccgact tcgtgctgcc ggtccccgac ggctatccgg acctcgaggc
      961 cgcgcctctc ctgtgcgcgg ggctgatcgg ctaccgggcg ctgcggatga cagagatcga
     1021 ggggctcgag ccgccggagg cggacgtgcc gccgcggctg ggcctgtacg ggttcggcgc
     1081 ctcggcccac atcgtgatcc aggtcgcgcg gcacctgggg cacgaggtgt acgtctgcac
     1141 gcgcggggcc gaggggcagg agttcgcgcg cgagctgggg gcgaagtggg ccgggagcgg
     1201 gggagaccgc ccgccggtcg agctggacgc ggcgatcatc ttcgcgcccg ctgggccgct
     1261 ggtgccggcc gcgctggcgg cggtgcggcc cggcgggacc gtggtctgtg cgggcatcca
     1321 catgtcgccg atccccgagt tcggctacga cctcctgtgg ggggagcggg tggtgcggag
     1381 cgtcgccaac ctgacgcgca ccgacgggcg cgagttcctc gcgctggcgc cccggatcaa
     1441 ggtccacacg agcgtgcagc agttcgggct cgaggaggcg aacgaggcgc tggtggagct
     1501 caaggcgggc acgctgcgcg gcgccgcggt gctggtgccg tgagagtcgg ggtggcggtg
     1561 gcggccgtcg ctctgatggg gcttgcggga tgtggcggcg acgattccgg gtcgctggtc
     1621 aagcctccgc cgccgcccga ggccgaacag ctctacggca cgtggaccgc gcgacaaccc
     1681 ggcggctacg acctgcacta cgtctttcgc cgcgacggca cgtatgagca ctcgcagggc
     1741 acgcgccaga agcggcgcga ggggacctac ctgttcgaga tcacgacgcg gggcacgatg
     1801 aggatccgtg gtgacacggt ggtgctgcgc ccgcgcagcg gcacgcaggt gcgccgcgac
     1861 ccggccgacc ccgagggcga ctaccggcgc ccggcccaga ggctgcgcca gcgctacacg
     1921 tggtcggtgc ggggtacggg cgcggaggcg aggctcacgc tgtcgatcgg cggaggcctg
     1981 gcggtcacat accggcggcg ctgagcccgc cggcgaggag cccctccagg cggcgcgtgg
     2041 tgcggtcccg ccggaccgtg acgtcgtccc aggtcaggcg cacgacgcgg tagccggcca
     2101 gctcgaggtc cgcgtccttc t
//
LOCUS       DASUYN010000628         2066 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_857158, whole genome shotgun sequence.
ACCESSION   DASUYN010000628 DASUYN010000000
VERSION     DASUYN010000628.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2066)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2066)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2066
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_857158"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..353)
                     /locus_tag="VF061_12255"
     CDS             complement(<1..353)
                     /locus_tag="VF061_12255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670330.1"
                     /translation="MVALPTSTWITALLIFFAVALGTISLALIVEWFQERRRQREALR
                     QLRAFTNEELDDGGVLRFRGSEVPLWFRPIAARVPAFQDLDLMMEQAGMKGHLPLFLL
                     GTIGLPIALGLATLAL"
     gene            complement(347..1819)
                     /locus_tag="VF061_12260"
     CDS             complement(347..1819)
                     /locus_tag="VF061_12260"
                     /inference="COORDINATES: protein motif:HMM:NF012652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CpaF family protein"
                     /protein_id="HEX6670331.1"
                     /translation="MTANPNGSVPPDSGAGPRVRLPWERGAATEASSAPPPAPAEPAV
                     RPAGDGAGTGTHYFQQVKSRVHRRLIERLNLSSLDRVGREQVIDAIRKVVHDLISQEM
                     VALNFEEREALVSQVLDEIFGLGPLEPLIQDPEISDILVNTFKQIFIERNGRLEKTDV
                     RFQDDRHLLQVIDRIVSSVGRRIDDSSPMVDARLPDGSRVNAIIKPLALDGPHLSIRK
                     FRRDALGAEDLIRYDSATEPMVELLRGIVKARLNVIISGGTGAGKTTLLNILSSFIPP
                     TERIVTIEDSAELQLRQPHVVRLETRPANIEGQGEVPQRLLLINALRMRPDRIIMGEC
                     RGGEAVDMLQAMNTGHDGSLTTIHSNSPRDCLSRLETMIAMASLDLPERAMRQQIASA
                     VNVVIQVSRLGDGTRKIMQISEIVGMEGDVITMQDIFVFERQGIGDNEKVLGQFKATG
                     IRPKFADRLKAYGIDLAAMLFSNLGERPHVAPRAGGTHRW"
     gene            complement(1824..>2066)
                     /locus_tag="VF061_12265"
     CDS             complement(1824..>2066)
                     /locus_tag="VF061_12265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670332.1"
                     /translation="RTVGLPVFGTLSNDYEGVIHSISTGKPIVLNGNSKFSRDMKVLG
                     ARVSGIHHKKAGRGALRALAAPFGRLFRRGGKKSEE"
BASE COUNT          311 a          687 c          730 g          338 t
ORIGIN      
        1 agcgccagcg tggcgagccc cagcgcgatc gggagaccga tcgtgcccag caggaagagc
       61 ggcaggtggc ccttcatccc ggcctgctcc atcatcaggt ccagatcctg gaaggccggg
      121 acccgggccg cgatgggccg gaaccagagg ggcacctcgc tcccgcggaa gcggagcacg
      181 ccgccgtcgt ccagctcttc gttggtgaag gcacggagct gacggagggc ctcgcgctgc
      241 cggcggcgct cctggaacca ttcgacgatg agcgcgagcg agatggtgcc gagggcgacg
      301 gcgaagaaga tgaggagcgc ggtgatccag gtcgacgtgg gcagggctac catcggtgcg
      361 tccctcccgc ccgcggggcc acgtggggcc gctcgccgag attggagaag agcatggcgg
      421 ccaggtcgat cccgtacgcc ttcagccggt ccgcgaactt gggccggatg ccggtcgcct
      481 tgaactggcc caggaccttc tcgttgtcgc cgatcccctg gcgctcgaac acgaagatgt
      541 cctgcatggt gatgacgtcg ccttccatgc ccacgatctc ggagatctgc atgatcttgc
      601 gggtcccgtc gcccagacgg ctcacctgaa tcaccacgtt gacggcgctg gcgatctgct
      661 gccgcatcgc ccgctccggg agatccaggc tcgccatggc gatcatggtc tcgagccggc
      721 tgaggcagtc ccggggcgag ttggagtgga tcgtggtgag cgacccgtcg tggccggtgt
      781 tcatcgcctg cagcatgtcc accgcctcgc cgccgcggca ctcgcccatg atgatgcggt
      841 cgggccgcat ccggagcgcg ttgatcagga gcaaccgctg cggcacctcg ccctggccct
      901 cgatgttggc cggcctggtc tccaggcgca ccacgtgggg ctggcggagc tgcagctccg
      961 cggagtcctc gatggtcacg atccgctcgg tgggcggaat gaaggacgag aggatgttga
     1021 gcagggtcgt cttgcccgcg cccgtgccgc ccgagatgat cacgttgagg cgggccttca
     1081 cgatgccgcg gagcagctcg accatcggct cggtcgcgct gtcgtaccgg atcaggtcct
     1141 cggccccgag cgcatccctc cggaacttcc ggatggagag atggggaccg tcgagcgcca
     1201 ggggcttgat gatcgcgttc acgcgggagc cgtcggggag cctggcatcc accatcggcg
     1261 aggagtcgtc gatgcgccgc ccgaccgacg acacgatccg gtcgatgacc tgaagcaggt
     1321 ggcggtcgtc ctggaaccgc acgtcggtct tctccagccg cccgttccgc tcgatgaaga
     1381 tctgcttgaa cgtgttcacc aggatgtccg agatctccgg atcctggatc agcggctcca
     1441 gcgggccgag tccgaagatc tcgtcgagca cctggctgac cagggcctcg cgctcctcga
     1501 agttgagcgc gaccatctcc tgggagatga ggtcgtgcac caccttgcgg atggcgtcga
     1561 tgacctgctc ccggcccacc cgatcgaggc tcgacaggtt gagccgctcg atcagccggc
     1621 ggtggacccg gctcttgacc tgctggaagt aatgggtacc ggtgcccgcg ccgtcaccgg
     1681 cggggcggac ggccggctcg gccggagccg ggggcggcgc ggagctcgct tcggtggcgg
     1741 cgccgcgctc ccaggggagc cgcacccgtg ggccggcgcc cgagtcgggc ggaacggagc
     1801 cgttgggatt cgcagtcatc gcattactcc tcggacttct tgccaccccg gcggaacagc
     1861 ctgccgaacg gtgcggccag ggcgcggagc gcgccgcggc cggccttctt gtgatggatg
     1921 ccgctcaccc gcgcgccgag caccttcatg tcccggctga acttcgagtt gccgttcagg
     1981 acgatgggct tcccggtgct gatggagtgg atcacccctt cgtagtcgtt gctcagggtg
     2041 ccgaagaccg gaaggcccac ggtacg
//
LOCUS       DASUYN010000629         2214 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_197650, whole genome shotgun sequence.
ACCESSION   DASUYN010000629 DASUYN010000000
VERSION     DASUYN010000629.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2214)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2214)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2214
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197650"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            74..622
                     /locus_tag="VF061_12270"
     CDS             74..622
                     /locus_tag="VF061_12270"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX6670333.1"
                     /translation="MSEPVVRTARLELRPLDAEAVDALLAGDGHRLRRLTGARFRTPA
                     PPPYMADALPVVHDRLRERPGEAPWWNWLAVERESGEAVGSVAFGGPVNTEGAVLIGY
                     AMYAEYEGRGYATEAVRAMVGWAFQQPGVREVRALAPVWNTPALRVAENVGMRPVASE
                     EDDDVGEVLLYAVTAPASVGSA"
     gene            complement(591..2138)
                     /locus_tag="VF061_12275"
     CDS             complement(591..2138)
                     /locus_tag="VF061_12275"
                     /inference="COORDINATES: protein motif:HMM:TIGR00924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide MFS transporter"
                     /protein_id="HEX6670334.1"
                     /translation="MAFPPAQSVEPALAPHDRAFFGHPRGLSTLFFTEMWERFSYYGM
                     RALLILFMTAPIAAGGLGFDTAKAGAIYGTYVSLVYITSLPGGWLADRFLGQRRATLY
                     GGVLIMLGHISLAVPSLTTFYTGLGLVTLGTGLLKPNISTLVGELYTPEDERRDAGFS
                     LYYMGINTGAFIAPLVCGWFAQSEQFRGILASMGLSPESSWHWGFAMAAIGMFFGLLQ
                     YLSGWRHLGSAGMYPAPVESPAHAAAQRRLLRIGLAVVIGGAVLLWLLSAAGVVRITA
                     QGVSNALGLVLLVTTVAFFAWMFFAAKWTTEERKRLVVVLVLFVAAMIFWSVFEQAGS
                     TLNLFAQRDTRTEAFGVSFPPSWLQSVAPFLLVVLSPVFAWIWWRLGPRDPSSPTKFT
                     IGLVCVSLSFAILVIPGQAAEQGIRVSPLWLVATYFLHTVGELCLSPVGLSAMTRLAP
                     ARIVGLTMGVWFLALSVGNYLGGRVGGLYEAFSLPGLFGAVAAFAAGAALVLALLIRP
                     IRRMLAQ"
BASE COUNT          388 a          758 c          788 g          280 t
ORIGIN      
        1 tcgctgttct atctctttcg ggtgttcaag agcgggcccc aggcccacga gccctcaccg
       61 aggtgagtca cgcatgtccg agcccgtcgt tcgcactgcc cgcctcgagc tccgtcccct
      121 cgatgcggag gcggtggacg cactgctcgc cggcgacggc caccgcctcc ggcgcctgac
      181 cggggcccgc ttccggaccc cggcaccgcc cccctacatg gcggatgcac tacccgtggt
      241 gcacgaccgg cttcgggagc ggccggggga agcgccatgg tggaactggc tggcggtcga
      301 acgggagtcc ggtgaggcgg tgggctcggt cgcgttcggg ggccccgtca acaccgaggg
      361 tgccgtgctg atcggctacg cgatgtatgc cgagtacgag gggcgcggct acgccaccga
      421 ggcggtgagg gcgatggtgg ggtgggcgtt ccagcagccc ggggtgcgcg aggtgcgcgc
      481 gctcgccccg gtctggaaca cgccggcatt gcgggtggcg gagaacgtcg gcatgcgccc
      541 cgtggcctcg gaagaagacg acgacgtggg cgaggtgctg ctgtacgccg tcactgcgcc
      601 agcatccgtc ggatcggcct gatcagcagc gccagcacca acgccgcccc cgcggcgaag
      661 gcggcgaccg cgccgaacag cccgggcagc gagaacgcct cgtagaggcc cccgacccgc
      721 ccgccgaggt agttccccac cgagagcgcc aggaaccata cccccatcgt caggcccacg
      781 atcctggccg gcgccagccg cgtcatggcg ctgagcccca ccgggctgag gcacagctcg
      841 cccacggtgt gcaggaaata ggtggcgacc agccagagcg ggctcacccg gatcccctgt
      901 tccgcggcct gtcccggaat caccaggatc gcgaagctga gggagacgca gaccagcccg
      961 atggtgaact tggtcgggct ggagggatcc cggggaccca gccgccacca gatccaggcg
     1021 aacacgggcg agagcaccac caggaggaac ggcgccaccg actggagcca gctcggcggg
     1081 aacgaaacgc cgaacgcctc ggtccgggta tcccgctggg cgaacagatt gagggtcgag
     1141 ccggcctgct cgaagaccga ccagaagatc atggccgcga cgaacagcac cagcaccacc
     1201 accagccgct tgcgctcctc ggtcgtccac ttggccgcga agaacatcca ggcgaagaac
     1261 gcgaccgtgg tgaccagcag gaccaggccg agcgcgttgc tcacgccctg cgcggtgatc
     1321 cgcacgaccc cggcggcgga gagcagccag aggagcaccg caccgccgat caccaccgcc
     1381 aggccgatcc gcagcagccg ccgctgggcg gccgcgtgcg cgggcgattc caccggcgcc
     1441 gggtacatcc ccgcgctccc gaggtgcctc cagccggata ggtactggag cagcccgaag
     1501 aacatcccga tggccgccat cgcgaacccc cagtgccacg agctctcggg tgagaggccc
     1561 atggaggcca ggatcccgcg gaactgctcg ctctgggcga accagccaca caccaggggc
     1621 gcgatgaagg ccccggtgtt gatgcccatg tagtagaggg aaaaccccgc gtcgcgccgc
     1681 tcgtcctcgg gggtgtagag ctcccccacc agggtactga tgttcggctt gaggaggccg
     1741 gttcccagcg tcaccaggcc caggccggtg tagaacgtgg tgagcgacgg gacggcgagg
     1801 ctgatgtgcc ccagcatgat gagcacgccg ccatagagcg tcgcccgccg ctggccgaga
     1861 aagcggtcgg cgagccagcc gccggggagc gaggtgatgt acaccagcga cacgtaggtc
     1921 ccgtagatgg ccccggcctt ggcggtgtcg aagccgagcc cgcccgcggc gatcggcgcg
     1981 gtcatgaaca ggatcagtag ggcccgcatc ccgtagtagc tgaagcgctc ccacatctcg
     2041 gtgaagaaca gcgtcgacag cccacgtgga tgtccgaaga acgcgcgatc gtgaggcgcc
     2101 agcgccggtt cgaccgactg agcgggaggg aaggccatga ggtaagagca taaccggggt
     2161 ccgtgtcatc ggggctcggg gctcggggtt cggggttcgg ggtttggctt tgga
//
LOCUS       DASUYN010000630         3630 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_858086, whole genome shotgun sequence.
ACCESSION   DASUYN010000630 DASUYN010000000
VERSION     DASUYN010000630.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3630)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3630)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3630
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_858086"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(149..1309)
                     /locus_tag="VF061_12280"
     CDS             complement(149..1309)
                     /locus_tag="VF061_12280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670335.1"
                     /translation="MRFGGLALLIVALGVASCDDSDGPSSPGTLIVSTSTTGNHPDQD
                     GYLLTVDGASSLTLGPTDSIETVLPTGRHDLRLLGVAEHCSVEPDLSVAIRIEASTAT
                     PVAFDISCQATGAVVSAVTSGVDLDPDGYRVVVDGVGREAVLPNSTALVLLGAGSRTI
                     MLQGLAGNCAMDGPASHTVTVEQATVVPVEFGVACTATTGTIGVFLADGEVEGVHAVR
                     VDGGSQIDVSVEAPAYVSGVSPGEHVVTIASPAHCSAEHDAHSVTVSAGGLVRDTAEV
                     IFEVTCEPTRFRITAPTTGQLPLSDYGVWGCDTSVYYCFYDFYYGQTGHVEFLDFLAP
                     NGTLFQPVTPEHVYYLELQVPETCHAEVPSTSIVAPAPGDTLDVEFTVACSP"
     gene            1483..3015
                     /locus_tag="VF061_12285"
     CDS             1483..3015
                     /locus_tag="VF061_12285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670336.1"
                     /translation="MRVFIALSLVLLACGPTRVQRTLVPPTHVATLDRKSPFLKAHLR
                     TGYVYVLHAWQVDSAGTLVSGQGSLLTPDREVESDGEYRLPVDSVALFETNLLKQGGG
                     VTALAVMTGVTAAVTAACLVDTKACFGSCPTFYVTDGVTDGAEAFLHAEGFSASIAPA
                     LEATDVDALYRVNPRGRDFRLRLTNEALETHVIRHADVLALPRPPSARVLVTPGGRFR
                     PATSLQAPLRCAAAEGDCADLVGGFDGRERMSPADSFDLAARETIDLEFAPVPGEAGL
                     VVTSRQSLMTTYLLYRSLSYLGSHAAGWLATLGSTGSEESLAAQGLGRLLGKIEVLVP
                     DPAGGWRLAGSIGETGPLAADTKVVPLPPTGGRPLRVRLRLTRGLWRIDYLALARLGE
                     PLAPRRIPPASVERDGRSDPAARQALTDSARSLVTLPGDAYDLVYRLPEHPERYELFL
                     ESRGYYLEWMREEWLAEENLLRAAQLVLDPAGALRDLAPAYKEREPDMERLFWSSRYV
                     RR"
     gene            3002..>3630
                     /locus_tag="VF061_12290"
     CDS             3002..>3630
                     /locus_tag="VF061_12290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670337.1"
                     /translation="MSAGSPARRCGVAAALACASCARPSAPAHWLPEPKEAESTAYGG
                     WIEVDYSEGQEVRRAAGELIAASADSLWVLDTTRPLVISTAAVRSGKLFGYSPRTGNL
                     AGWTVAGVVSTISNGVFLVITAPLWAITGGIAIGSEVRAARRDVAPLGWAELRPFARF
                     PQGMPDVALDALRAKPARRPCRKRAPSCRTWGLSRRRDRSDCRTFPPDAP"
BASE COUNT          520 a         1293 c         1284 g          533 t
ORIGIN      
        1 atgctgagga cgttggccgt ccgggccacc gccgccgctt cctcgaccgc gggcgcgggt
       61 cggccaggat cggcgggctc gccgcatccg cacagcgaga gcgccgcgac ccacagcagg
      121 cgtcggtcgc acagccgagc cccggcgttc acggcgagca cgcgaccgtg aactcgacgt
      181 ccagcgtgtc accgggggca ggcgcgacga tgctggtgga ggggacctct gcgtggcagg
      241 tctccgggac ctgcagctcg aggtagtaga cgtgctccgg cgtgaccggc tgaaacagcg
      301 tcccgttggg ggccaggaag tccaggaact cgacgtggcc ggtctggcca tagtagaagt
      361 cgtagaagca gtaatagacg ctggtgtcgc agccccagac gccgtagtcg ctcaggggca
      421 actgtccggt ggtcggggcg gtgatacgga agcgcgtggg ctcgcaggtt acctcgaaga
      481 tcacctcggc cgtatcgcga acgaggccgc cggcactgac ggtcaccgag tgggcgtcat
      541 gctccgccga gcagtgagcg ggcgaggcga tcgtgacgac atgctcgccg gggctcacgc
      601 cggacacata ggccggagct tccaccgaca cgtcgatctg cgacccccca tccacccgca
      661 ccgcgtgcac gccctccacc tcgccatcgg cgagaaagac gccgatcgtg ccggtggtcg
      721 cggtacacgc gaccccgaac tccaccggga cgaccgtcgc ctgctcgacg gtcaccgtgt
      781 gcgaggccgg tccgtccatc gcgcagttcc cggcgagacc ctgcagcatg atcgtgcggc
      841 tccccgcacc gagcagcacc agggcggtgc tgttcgggag cacggcctca cggcccacgc
      901 cgtccaccac cacccggtag ccgtccgggt cgagatccac tccggacgtc accgcgctca
      961 ccacggcgcc ggtggcctgg cagctgatgt cgaatgcgac gggagtagcg gtggacgcct
     1021 cgatcctgat cgcgacggag agatcgggct ccaccgagca atgctccgcc acgccgagaa
     1081 gcctcagatc gtgccggccg gtcggaagca ccgtttcgat gctgtccgtg gggcccagcg
     1141 tcagcgagct ggcgccgtcc accgtgagta ggtaaccgtc ctgatcgggg tggttgccgg
     1201 tggtggaggt ggaaacgatc agggtccccg gcgacgaggg accgtcggag tcgtcgcagg
     1261 acgcgacgcc cagcgcgaca atgagcagag cgagcccacc gaaccgcatg tgccgcctcc
     1321 gtccgatgac tcgaacgttg gacggacagg gcgtggaaac ttgcttgtcg tgcggaggag
     1381 ggccctacag gggaccaccc ccttcttgac ccggccgtct ccggccggta acgtagcgtc
     1441 ggttctccac ccccaacctc cagcttcgtc acgggtaccg cgatgcgggt gttcatcgcg
     1501 ctcagcctcg tgctcctggc ctgcggaccc acccgcgtgc agcgcacgct cgtgcctccc
     1561 acccacgtcg ccacactgga ccggaagtcg ccgttcctga aggcccacct ccgcaccggc
     1621 tacgtctacg tgctgcacgc ctggcaggtg gattcggcgg gtacgctggt gagcgggcag
     1681 ggctcgctgc tcacccccga tcgcgaagtc gagagcgacg gggagtatcg cctgcccgtg
     1741 gactcggtgg cgctgttcga gaccaatctc ctcaagcagg gcggcggcgt caccgcgctg
     1801 gcggtgatga ccggggtcac cgcggcggtc accgcggcct gcctggtgga taccaaggcc
     1861 tgcttcggct cctgcccgac gttctatgtg acggacggcg tgacggacgg cgccgaagcg
     1921 ttcctccacg ccgaggggtt ctccgcgagc atcgcgcccg cgctggaggc caccgacgtg
     1981 gacgctctct accgcgtgaa tccgcgcggc cgcgacttcc ggttgcgcct caccaacgaa
     2041 gcgctggaga cgcacgtcat ccgccatgcc gacgtgctcg cgttgccgcg tccgccctcc
     2101 gcgcgagtcc tggtcacgcc cgggggccgg ttccggcccg ctacctcgct gcaggccccg
     2161 ctgcgttgtg cggctgccga aggggactgc gccgacctgg tcggcggctt cgacggccgg
     2221 gagcggatga gcccggccga ctccttcgat ctggcggcgc gcgagacgat cgatctcgag
     2281 ttcgctccgg tgcccggcga ggcgggcctg gtcgtcacct cccgccagtc gctgatgacg
     2341 acgtatctgc tgtaccgctc gctctcgtat ctcggcagcc acgccgccgg ctggctcgcg
     2401 accctgggca gcaccggctc ggaggagagc ctggcggccc agggcctcgg tcggctgctg
     2461 ggaaagatcg aagtgctggt gcccgatccg gccggcggct ggcggctggc gggcagcata
     2521 ggcgagaccg gtcccctcgc cgccgacacg aaggtcgtgc ccttgccacc gaccggcggc
     2581 cggccgctcc gcgtccggct ccggctgacc cgcgggctct ggagaatcga ctacctggcg
     2641 ctcgcccggc tcggggagcc gctcgcgccg cggcgcatcc cgcccgcctc cgtcgagcgc
     2701 gacggccgga gcgatccggc ggcgcggcag gccctgaccg acagcgcgcg atcgctggtc
     2761 accctgccgg gcgacgccta cgacctggtc taccggctgc cggagcaccc ggagcggtac
     2821 gagctcttcc tggaatcgcg gggctactac ctcgagtgga tgcgggagga gtggctggcg
     2881 gaggagaacc tgctgcgggc ggcgcagctg gtcctcgatc ccgcgggcgc gcttcgcgac
     2941 ctggcgccgg cgtacaagga gcgggagccc gacatggaac ggctcttctg gagcagtcgc
     3001 tatgtccgcc ggtagcccgg cccgccggtg tggcgttgcc gccgccctcg cctgcgcctc
     3061 gtgcgccagg ccgtcggcgc cggcgcactg gctgcccgag cccaaggaag cggagagcac
     3121 cgcctacggc gggtggatcg aagtggacta ctcggaggga caggaggtgc gccgcgcggc
     3181 gggagagctg atcgccgcga gcgcggacag cctctgggtg ctggacacca cccggcccct
     3241 ggtgatctcg acggccgcgg tgcgctccgg gaagctcttc ggctactccc cccggaccgg
     3301 gaacctggcc ggctggacgg tggcgggggt agtctcgacg atctcgaatg gcgtgttcct
     3361 ggtgatcacg gcccccctgt gggcgatcac cggcgggatc gcgatcggaa gcgaggtgcg
     3421 cgccgcccgg cgagacgtcg ctccactggg ctgggccgag cttcggccct tcgccaggtt
     3481 tccgcagggc atgcccgacg tcgcgctcga cgccttgcgg gccaagcccg ccaggcgacc
     3541 gtgtcgcaaa agggccccct cttgtcgcac ctggggcctt tcgcgtcgga gagaccgatc
     3601 agactgtagg accttccccc ctgatgcccc
//
LOCUS       DASUYN010000631         4639 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_858346, whole genome shotgun sequence.
ACCESSION   DASUYN010000631 DASUYN010000000
VERSION     DASUYN010000631.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4639)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4639)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4639
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_858346"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..410
                     /locus_tag="VF061_12295"
     CDS             <1..410
                     /locus_tag="VF061_12295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670338.1"
                     /translation="GITVGLNLEVRTILPVQYRKGAVATSVRSTRLSTAVEGDSLAVR
                     MRLERMGTAAFIGTVRGTLSDSTGASLAAFASPVAVYYDMEPRFTAALPAGRLPPGRY
                     LLRTEIAAEREDLAPETILPARPVRDSIEVRLP"
     gene            407..2974
                     /locus_tag="VF061_12300"
     CDS             407..2974
                     /locus_tag="VF061_12300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HEX6670339.1"
                     /translation="MSLRRFVSGLAAVLLAPAALPAQVAMDTTRLEPVLVELTIGRYG
                     SRTVPAYRSSGDALLPVLQLAEMAELRAHPLPDGAIELTLEAGRQLVRLDTARWEIRG
                     ARGTVALTPADRIVTPDEHYLSTRTLGELLDVRFSVNWSELSVTLLDADSLPVARRVA
                     RERAHALFRSGGPEGTPDLALGMDRTRWDGVVLDYSILAPSQDLLGNGAYSAGLGLNL
                     LGGALEARIANEGPPRGGDLRVDGSWTGVWRTSRYLTQLRLGDGLSTGPRPRSVRGLS
                     LSNAPFLRSSLFGNIDFHGALGPGWEIEAYRGGRLIALDSADAIGRFSLDLPVEYGEN
                     AMDFVAYGPFGEIRRFNQNYRVTGHVIPERRFEYGLAVGGCRTAECTANANLDLRYGL
                     SRRWTVRGGVDQFWRDSLTALFHPYLGVGGTLGNAWALEVEGVASAVVRGALRYEPSQ
                     DLRIGTEYHDFAGGTVAPLLTPLGRRTQWTTDLLARPVPGRDDIYLETTLDRITAVNG
                     NTTSGRLGLSLYASRFQLSPALRHVRFSAAGGLSSTQTFASLNTFSLPFPELGPLLGR
                     VTSRTHLEIDGGGRLAIAGGYLSREVVQHLQLEVGATWSRGLGTVMSLFLSTQLPTIR
                     ATTTVSAPSRGDAMVRQFVQGSVLYDPARRQVAFASGPSLERAGISGRVFLDANGDGR
                     WQTGEQALDGVRVRAGYVTALSDSAGRYRIWDLPAFEPVVVAVDSSTLASPLWVPAYN
                     SVSVETGPNRFRTLDIPILPGGVIEGRVVRESVDSAVPVSGARLLLRRHGSSQTVQLV
                     TFSDGGFYLIGVKPGAYELSVDPAMLAKLGLSAWPVAFTMPPLPDGATVEGLELRLE"
     gene            complement(2977..4428)
                     /locus_tag="VF061_12305"
     CDS             complement(2977..4428)
                     /locus_tag="VF061_12305"
                     /inference="COORDINATES: protein motif:HMM:NF014398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0042279 - nitrite reductase (cytochrome,
                     ammonia-forming) activity [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-forming cytochrome c nitrite reductase
                     subunit c552"
                     /protein_id="HEX6670340.1"
                     /translation="MTQPSDASSDPARPRRRAGRWIVLAAVAAALVTLGVAALLTTII
                     ERKQEARNPFYRVVELTDTTADPAVWGRNFPQQYDDYKKTVDMVHTRYGGSEATPRTP
                     TATDPRQVVAQSRLQADPRLMEMWAGYAFAQDFREERGHAYMLDDQVFTERQRVARQP
                     GTCLHCHASMYVPYMRAGEGDLIKGFEKLNPMPYFEAKKLAGNHPVACIDCHQPATME
                     LRVTRPGFLEGIRAVKAAEGVEDYDVNRDASRQAMRTYVCGQCHVEYYFQGEGKRLTY
                     PWARGLRVDSMLAYYEANGHKDWTHARTGAPVLKAQHPEFEMYSQGIHARSGVACADC
                     HMPYERRGALKISDHHVRSPLLNLDQACQTCHKISEQELQERVYTIQDRTFETRNIAI
                     DALLDLIAGLEKARAADSADPRVSLAQRYQRAAQFYADFVEAENSMGFHADQEAVRIL
                     GNSINFSRLGQAALRGERVPAAPLDAARGSAHR"
     gene            complement(4459..>4639)
                     /locus_tag="VF061_12310"
     CDS             complement(4459..>4639)
                     /locus_tag="VF061_12310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670341.1"
                     /translation="HADIVAAIDPLGGDDAVEIRRGVAGTPVADRPQIHDGTVAAEDR
                     ESCIRCHTYVGHLVR"
BASE COUNT          602 a         1644 c         1633 g          760 t
ORIGIN      
        1 cgggcatcac ggtggggctc aacctggagg tgcgcaccat cctcccggtc caataccgga
       61 agggcgcggt ggccacctcg gtgcgttcca cccggctctc gacagcggtg gaaggcgact
      121 ctctcgcagt acggatgcgc ctggagcgga tgggaaccgc ggccttcatc gggaccgtcc
      181 gcggcaccct gtccgactcc actggagcct ccctggcggc gttcgccagc ccggtcgccg
      241 tttactatga catggagccg cgattcaccg ccgcgctccc cgccgggcgg ctcccgcccg
      301 gccggtacct gctccggacc gagatcgccg cggagcgcga ggacctcgca ccggagacga
      361 tcctcccggc ccggccggtg cgcgactcga tcgaggtccg cctgccgtga gcctccggcg
      421 gttcgtgtcc ggcctggcgg cggtgctgct cgcaccggcg gcactgcctg cccaggtggc
      481 catggacacg acccgtctgg agccggttct cgtcgagctc accatcggcc gctacggctc
      541 ccgcacggtg cccgcctacc gatccagcgg cgatgccctg cttcccgtgc tccagctggc
      601 ggagatggcc gagttgcggg ctcacccgct gccggatggc gcgatcgagc tcacgctgga
      661 ggctggacgg cagctcgtgc ggctcgacac tgcccgttgg gagatccgcg gcgcccgcgg
      721 gaccgtcgcg ctcacacccg ccgaccggat cgtgacgccc gacgagcact acctcagcac
      781 ccggacgctg ggggagctgc tggacgtgcg cttcagcgtg aactggagcg agctgtccgt
      841 gaccctgctg gatgcggaca gcctgccggt cgcccggcgg gtcgcgcgtg agcgcgcgca
      901 cgcgctcttc cggagtggcg gccccgaggg gacaccggac ctggcgctcg ggatggatcg
      961 cacccggtgg gacggcgtcg tgctcgacta ctccattctc gcccccagcc aggacctgct
     1021 ggggaacggc gcctactccg cggggctggg cctcaacctg ctcgggggtg ccctggaggc
     1081 ccgcatcgcg aacgagggcc ccccgcgcgg cggcgatctg cgggtggacg gctcctggac
     1141 cggggtgtgg cggaccagcc ggtacctcac ccagctacgg ctgggagacg ggctgtccac
     1201 ggggccgcgg ccgcgctcgg tccgcggctt gtcgctgtcg aatgccccgt ttctgcggag
     1261 ctccctgttc gggaacatcg attttcacgg cgcgctcggt ccgggatggg agatcgaggc
     1321 ctaccgcggc ggccggctga tcgcgctcga ttccgcggat gccatcggac gcttctcgct
     1381 cgacctgccg gtggagtacg gcgagaacgc gatggacttc gtcgcgtacg gccccttcgg
     1441 cgagatccgg cgcttcaacc agaactaccg cgtcaccggc cacgtgattc cggagcgccg
     1501 cttcgaatac ggcctcgcgg tgggaggttg ccgcaccgcg gagtgcaccg ccaacgccaa
     1561 tctcgacctt cgctacggcc tcagccgccg ctggacggtc agggggggcg tcgaccagtt
     1621 ctggcgcgac tcgctcaccg cgctgttcca cccctacctg ggcgtgggtg gcacgctcgg
     1681 gaacgcgtgg gcgctcgagg tcgagggggt cgcctcggcg gtggtccggg gcgccctgcg
     1741 ctacgagccc tcccaggacc ttcggatcgg aaccgagtac cacgacttcg ccggcgggac
     1801 ggtcgcgccg ctgctcacgc cgctggggcg ccggacccag tggaccaccg atctgctggc
     1861 gcgaccggtc ccgggtcgcg acgacatcta cctggagacg accctcgacc gcatcaccgc
     1921 ggtcaacggg aacaccacca gcggccgcct cggcctgtcg ctgtacgcct cgcggttcca
     1981 gctctcgccg gccttgcgtc acgtgcgctt cagcgccgcc ggcggactgt cgagcacgca
     2041 gaccttcgcg tcgctgaata ccttctcgct ccccttcccc gagctcggcc cgctgctcgg
     2101 cagggtcacg tcgcgcaccc atctggagat cgacggcggc gggcggttgg cgatcgctgg
     2161 cgggtatctc tcgcgcgagg ttgtgcagca cctgcagctc gaggtcggag ccacctggtc
     2221 gcgcggcctc ggcaccgtca tgtccctctt cctctccacc cagctgccca ccatccgggc
     2281 gacgaccacg gtctccgcgc cctcacgcgg tgatgccatg gtccgccagt tcgtgcaggg
     2341 gtcggtcctg tacgacccgg cccgccgcca ggtggccttc gccagcggtc cctcgctcga
     2401 gcgggcgggc atcagcggcc gcgtgttcct ggacgcgaac ggcgatgggc gctggcagac
     2461 cggcgagcag gccctcgacg gcgtgcgcgt gagagcgggc tacgtcaccg cgctctccga
     2521 ctccgccggc cgctatcgga tctgggatct gccggccttc gagccggtgg tggtggcggt
     2581 ggactccagc actctagcct cacccctctg ggtaccggcc tataactcgg tcagcgtgga
     2641 gaccggcccg aatcggtttc ggaccctgga cattcccatc ctgcccgggg gcgtcatcga
     2701 ggggcgggtg gtgcgggagt cggtggactc ggccgtcccg gtgtccggcg cgcggttgct
     2761 gctgcggagg cacggctcca gccagacggt gcagctcgtc accttctcgg atggtgggtt
     2821 ctatctcatc ggggtcaagc cgggcgcgta cgagctgtcc gtggacccgg cgatgctggc
     2881 caaactggga ctgtcggcgt ggccggtcgc cttcaccatg cctccgttac cggacggcgc
     2941 gacggtcgag gggctcgagc tgcgcctgga atgaggtcac cggtgagccg atccccgggc
     3001 agcgtcgagc ggcgcggccg gcacccgctc cccccgcagc gccgcctggc ccagacgtga
     3061 gaagttgatc gagttgccga gaatccggac cgcctcctgg tccgcgtgga accccatcga
     3121 attctccgcc tcgacgaagt cggcgtagaa ctgcgcggcg cgctgatagc gctgggccag
     3181 actgaccctg ggatcggcac tgtcggccgc gcgagccttc tcgaggcccg cgatgagatc
     3241 caggagggcg tcgatcgcaa tgttacgggt ctcgaaggtg cggtcctgga tggtgtagac
     3301 ccgctcctgc agctcctgct ccgagatctt gtggcaggtc tggcaggcct ggtccaggtt
     3361 gagcagcggg ctccgcacgt gatggtcgct gatcttgagg gcgccgcggc gctcgtaggg
     3421 catgtggcag tcggcgcagg cgacgccgga gcgggcgtgg atgccctggc tgtacatctc
     3481 gaactccggg tgctgggcct tgagcaccgg cgcaccggtg cgggcgtggg tccagtcctt
     3541 gtgcccgttc gcctcgtaat acgccagcat gctgtccacc cgcagcccgc gcgcccacgg
     3601 gtaggtcagc cgcttcccct cgccctggaa atagtactcc acgtggcact ggccgcagac
     3661 gtaggtgcgc atcgcctggc ggctggcgtc gcggttcacg tcgtaatcct cgacgccctc
     3721 ggcggccttc accgcccgga tcccctcgag aaatcccgga cgcgtcaccc gcagctccat
     3781 ggtggccggc tggtggcaat cgatgcaggc caccggatgg tttccagcca gcttcttcgc
     3841 ctcgaagtac ggcatcgggt tcagcttctc gaaacccttg atcagatccc cctcgcccgc
     3901 gcgcatgtac ggcacgtaca tcgaggcatg acagtggaga caggtgcccg gctgccgggc
     3961 cacccgctgc cgctcggtaa agacctggtc gtcgagcatg taggcgtgcc cccgttcctc
     4021 gcggaagtcc tgggcgaagg catagccggc ccacatctcc atcagccgcg gatcggcctg
     4081 gaggcggctt tgcgccacca cctggcgggg atcggtcgcg gtcggcgtcc ggggtgtggc
     4141 ctcactgccg ccgtaccggg tgtgcaccat gtccaccgtc ttcttgtagt cgtcgtattg
     4201 ctgcgggaag ttgcggcccc agaccgccgg gtccgccgtg gtatcggtca gctcgaccac
     4261 gcggtagaag gggttccgcg cctcctgctt gcgctcgatg atggtggtga ggagcgcggc
     4321 gacgcccagc gtgaccagag cggcggccac ggccgcgagc acgatccagc ggccggcccg
     4381 ccggcgggga cgcgcagggt cggagcttgc gtcgctgggt tgggtcatcg ggggctcccc
     4441 ttctctgcgg caggcgcgct agcgcaccag gtggccgacg taagtgtgac agcggatgca
     4501 ggactcgcgg tcctcggcgg cgacggtgcc gtcatggatc tggggtcgat cggcgacggg
     4561 cgtgcctgcc acgccgcgcc ggatctcgac ggcgtcgtcg ccgcccagcg gatcgatggc
     4621 ggcgacgatg tcggcgtgg
//
LOCUS       DASUYN010000632         3059 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_859117, whole genome shotgun sequence.
ACCESSION   DASUYN010000632 DASUYN010000000
VERSION     DASUYN010000632.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3059
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_859117"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..308)
                     /locus_tag="VF061_12315"
     CDS             complement(<1..308)
                     /locus_tag="VF061_12315"
                     /inference="COORDINATES: protein motif:HMM:NF013200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670342.1"
                     /translation="MAATFAFAESRDGNLRKVAFETVTAARRVADASGGGEVHALLMG
                     APGIAARAAELGRYGADLVVVVEDPGLAHYNPEVCAATAAERLRAGSYRAGFFPASAQ
                     G"
     gene            complement(308..1060)
                     /locus_tag="VF061_12320"
     CDS             complement(308..1060)
                     /locus_tag="VF061_12320"
                     /inference="COORDINATES: protein motif:HMM:NF013200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HEX6670343.1"
                     /translation="MKIAVCLKRVPEMELRFSIAGDRKSLDPGGLKYEISDFDGYALE
                     VALQLVEKAGSGEVVAVCLGPDGVQETLRKALAMGATRAVQLKADEVPFDGAAVAAAL
                     AAELREGGYDLILFGRIATDTASGTVGPMTAHLLDLPCVTAISHLELGDGRGTARRDL
                     EGASETVSFPLPVVLTIDEGIARARLATLKGIMAAKKKPLDVRPAQLGEVRLTVESMA
                     LPPERTGGRIVGEGADAVPELVRLLRAEAKVL"
     gene            complement(1173..>3059)
                     /locus_tag="VF061_12325"
     CDS             complement(1173..>3059)
                     /locus_tag="VF061_12325"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX6670344.1"
                     /translation="VAVFLDGVRMNEPEASQINFDLLPMDHIQRIEVLSGNGSLLGRN
                     ALGGAINLVTSRGTGPARGTVELSGGSFGAFRGEANVSGLAANGMDWYVGGNYNREGG
                     WRDVTGAEEYSGFVNVGKLGQSRGLRFQGLYGNSRVETAGSLPESIFRTSPDSNLSAN
                     DYEDLWAFQGSLQGYTQVGTGRASGTVYFRRHRAERFNANQPDDPDVFGISYNTSFGY
                     TADYRWATLLSQNLALSLRAGVDGSINRVKIDIFADSVKFGGDRSLTTLVRSPIWDVA
                     PFLLADVTTGPVTFSAGARYDYVRIPFENLLDPTADTVGRYSRLNPRVGVTLAVASGA
                     SVFASWGRSFRSPAVIENACADPEAPCPLPFALGDDPPLDPVKATTIEAGFRYGNENL
                     ALDGSVYHMNVRNDIFLTPFGEEEPEGGTIDGFFINIDRTRRVGVELGAAYRFDGGHS
                     AYLNYAFTRATFQSPAAIFSIRSLEEGDEGEEESVINPFPTDNEVAAGDRFPVVPDHL
                     LKGGATVRIGRYFYAGADARYTGKQWLRGDEANVTSQLEDYVVADARVGVEFDRWEIS
                     GVVTNVFQNRYAIFGAFNVNQGNPAGPTVERFLSPGAERMFRLIVRTSLGGSRQDGGA
                     GDID"
BASE COUNT          463 a         1089 c         1044 g          463 t
ORIGIN      
        1 ccctgggcgg aggcggggaa gaagccggcg cgatagctgc ccgcgcgcag ccgctccgcg
       61 gcggtcgcgg cgcacacctc cgggttgtag tgcgccagcc ccgggtcctc caccacgacg
      121 accaggtcgg ccccgtagcg tccgagctcc gccgcccggg ccgcgatgcc cggcgccccc
      181 atcaggagcg cgtgcacctc gccgccgccg gatgcgtcgg ccacgcggcg ggcggcggtc
      241 acggtctcga aggccacctt gcggagattg ccgtcccgcg actccgcgaa cgcgaacgtc
      301 gcagccatca gaggaccttc gcttcggcgc ggagcagtcg caccagctcg ggcacggcat
      361 cggccccctc gcccacgatc cgtccgccgg tgcgctccgg tgggagcgcc atggattcca
      421 ccgtgagcct cacctcgccg agctgcgcgg gccgtacgtc gagcggcttc ttcttggccg
      481 ccatgatccc cttgagggtg gcgaggcggg cccgggcgat gccttcgtcg atggtgagaa
      541 cgaccggcag ggggaacgac accgtctccg aggcgccctc gaggtcgcgc cgtgcggtgc
      601 cgcgcccgtc gccgagctcg aggtgggaga tggccgtgac gcaggggagg tcgagcaggt
      661 gggccgtcat cgggccaacg gtgccgctgg cggtgtcggt ggcgatgcgc ccgaacagga
      721 tcaggtcgta gccgccctcc cggagctcgg ccgccagcgc ggccgccacg gccgcaccgt
      781 cgaacgggac ctcgtccgcc ttgagctgga cggcccgggt ggcgcccatc gcgagggcct
      841 ttcgcagggt ctcctgcact ccatcggggc cgaggcagac ggcgaccacc tcaccgctcc
      901 ccgccttctc caccagttgg agcgcgacct cgagagcgta gccgtcgaag tcactgatct
      961 cgtacttgag cccacccgga tccagcgatt tgcggtcccc cgcgatggag aacctgagct
     1021 ccatctccgg cacccgcttg agacacaccg cgatcttcaa cgcacgctcc cggcctcggt
     1081 cctggctcgt cccgcgaact ggcggcaaag ctagtcgggg gcggcggtgt tgtcaccctg
     1141 agcgcagcga aggggcgcgt gacggcactc cctcagtcga tgtcccccgc accgccatcc
     1201 tgccgcgagc cgcccagcga cgtccgcaca atcagccgga acatccgctc ggcaccgggg
     1261 gagagaaagc gctccaccgt ggggcctgcc ggattgccct ggttcacgtt gaacgcgccg
     1321 aaaatggcgt agcgattctg gaagacgttg gtgacgacgc cgctgatctc ccagcggtcg
     1381 aactcgacgc ccacccgcgc atcggccacg acgtaatcct cgagctggct cgtgacattg
     1441 gcctcgtctc cgcgcagcca ctgcttcccg gtgtagcggg cgtccgcgcc ggcgtagaag
     1501 taccgtccga tcctgacggt ggcaccgccc ttgagcaggt ggtcgggtac gaccgggaac
     1561 cggtcgcccg ccgcgacctc gttgtcggtc gggaagggat tgatgaccga ctcttcctcg
     1621 ccctcgtcgc cctcctccag cgagcggatg ctgaagatcg ccgccgggct ctggaaggtc
     1681 gcccgggtga aggcgtagtt caggtacgcc gaatggcccc cgtcgaatcg gtaggccgcg
     1741 ccgagctcca ccccgacccg ccgggtccgg tcgatgttga tgaagaagcc gtcgatcgtg
     1801 cccccttcgg gctcctcctc gccgaacggc gtgaggaaga tgtcgttccg cacgttcatg
     1861 tgatacaccg atccgtcgag cgcgagattc tcgttcccgt agcggaaccc ggcctcgatc
     1921 gtcgtcgcct tcaccgggtc cagcggcggg tcgtcgccca gcgcgaacgg gagtgggcag
     1981 ggcgcctcgg gatcggcaca cgcgttctcg atcaccgcgg gagagcggaa gctccttccc
     2041 caggaggcga agaccgaggc gccggacgcc acggcgaggg ttacaccgac gcggggattc
     2101 agccggctgt agcggccgac cgtatccgcc gtcgggtcga gcaggttctc gaacgggatg
     2161 cggacgtagt cgtagcgcgc gcccgcggag aacgtcaccg ggccggtcgt gacgtcggcc
     2221 aggaggaacg gcgccacgtc ccagatcggg ctccgcacca gcgtggtcag cgaacgatcg
     2281 cccccgaact tcaccgagtc ggcgaagatg tcgatcttca cgcggttgat gctgccgtcc
     2341 acgccggcgc gcaggctgag cgccaggttc tggctgagca gggtggccca gcggtagtcc
     2401 gcggtgtagc cgaaactggt gttgtaggag atgccgaaga cgtcgggatc gtccggctgg
     2461 ttggcgttga accgctcggc ccggtgccgg cggaagtaca ccgtccccga cgcgcgcccg
     2521 gtgccgacct gagtgtagcc ctggagcgag ccctggaagg cccagaggtc ctcgtagtcg
     2581 ttggcgctga ggttggagtc gggactggtc ctgaagatgg actccgggag cgacccggcg
     2641 gtctcgaccc gggagttgcc gtacaggccc tggaaccgga gaccccggct ctggcccagt
     2701 ttgcccacat tcacgaaacc gctgtactcc tcggcgccgg tcacatcccg ccacccgcct
     2761 tcccggttgt agttacctcc cacgtaccaa tccatcccgt tggcggcgag accggagacg
     2821 ttcgcctctc cacggaacgc gccgaagctg ccgcccgaga gctccaccgt gccccgcgcg
     2881 gggccggtgc cacgcgacgt caccaggttg atcgcgccac ccagcgcatt gcgccccagc
     2941 agcgagccgt tgccggacag cacctcgatg cgctggatgt gatccatggg gagcaggtcg
     3001 aagttgatct gcgaggcctc cggctcgttc atccgcaccc cgtcgaggaa cacggcgac
//
LOCUS       DASUYN010000633         3515 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1082654, whole genome shotgun sequence.
ACCESSION   DASUYN010000633 DASUYN010000000
VERSION     DASUYN010000633.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3515)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3515)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3515
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1082654"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..324)
                     /locus_tag="VF061_12330"
     CDS             complement(<1..324)
                     /locus_tag="VF061_12330"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX6670345.1"
                     /translation="MRLLIVDDDVEIRRSLGQKLEEAGHQVTVESEPERALQRATAGS
                     FEIILCNVRLPRMDGVTFLRRYRAAGGSELFIMISPPGSEEGAIAAMREGAYDWVQKP
                     FRAEEV"
     gene            complement(513..905)
                     /locus_tag="VF061_12335"
     CDS             complement(513..905)
                     /locus_tag="VF061_12335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEX6670346.1"
                     /translation="MRTTRRGFTLIELLIVVVIIGLLSAIAIPKFANTKAKAVVSAMR
                     SDLRNLAGTQETYWTEFNTYYSGVIPDPSFNFRPSSNVTITIVSATPSGWSAQATAAS
                     ITPQTCVIFYGAVPPIPPATADAAVACT"
     gene            complement(1019..1453)
                     /locus_tag="VF061_12340"
     CDS             complement(1019..1453)
                     /locus_tag="VF061_12340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEX6670347.1"
                     /translation="MKNRKGFTLIELLIVVVIIGILAAIAIPKFANTKEKAVVASMKS
                     DLRNLVTAQEAFFSDNQDYAGGTYVGDGTVYTQTNGLAGAGRLAFSPSANNTIVVAYV
                     GAAAWSATATNPAVTSAASDVCGVFVGPVVAPMTAEGAPLCY"
     gene            complement(1789..3168)
                     /locus_tag="VF061_12345"
     CDS             complement(1789..3168)
                     /locus_tag="VF061_12345"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEX6670348.1"
                     /translation="MSQKPSVLVVDDESGILDTLRILLRNEGFEVTTAQGGKAGLEQI
                     RTGAHDLILSDVRMPQVTGLDILNAAREQDPMTPVILMTAQASLQSAIQAVNSGAFYY
                     IQKPFSNDELVAILRRACEFRQVRVENKQLKQEIRRRDKTAVARPIGKSKRFMEVLKL
                     AEHVSPTESTVLIQGESGTGKEVIARYIHNLSNRADGPFLSINCGALPENLLESELFG
                     HVKGSFTGAVRDKQGLFAAARGGSFFLDEVGEMPPSLQVKLLRVLQEREAIPVGATEA
                     IPVDVRIIAATNRDLEEEIRRGNFRSDLFYRLNVIALNLPPLRERRDDLLLLLEAFLQ
                     SMAQEGGTEAKALASEALDAVMVYEWPGNVRELENALEHAVVLSRGNLIEAAALPERI
                     TKRRKEPLVAERSYRNPTLEVIERAYIMWVLQAEGGNKTRAAEVLGIDPSTLYRKLSR
                     YEEQVEVKA"
     gene            complement(3165..>3515)
                     /locus_tag="VF061_12350"
     CDS             complement(3165..>3515)
                     /locus_tag="VF061_12350"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX6670349.1"
                     /translation="VITNLVLNAVQVARGPIRITVSVASVSAGEIPHGTNLDHAVRLQ
                     VRDDGPGIPEEIRDRLFDPFVSGRTGGSGLGLAIVQRAVEAHRGLVLVDSEPGTGTTF
                     TIFLPAKMLAEDAA"
BASE COUNT          538 a         1179 c         1215 g          583 t
ORIGIN      
        1 gacttcctcg gcccggaaag gcttctgcac ccagtcgtag gccccctcgc gcatggcggc
       61 gatcgcaccc tcctcgctgc cgggggggct gatcatgatg aacagctcgc tcccgcccgc
      121 cgcgcggtac cgacggagaa aggtgacccc gtccatgcgg ggcagccgga cgttgcagag
      181 gatgatctcg aaggaacccg cggtcgcccg ctggagggcc cgttcgggct cgctctccac
      241 ggtgacctgg tgaccggcct cctcgagctt ctggccgagg gagcggcgga tctcgacgtc
      301 gtcgtcaacg atgagcaagc gcattggtcg tacccacatg agacaagagg acttcagtgc
      361 cgcgccttac ccggaaactg gcggtctgca tcgcgtcccg ccgcgccaat ccttgctccg
      421 gcgccgcgag acccccgcag acggccgact tccgaccggg tgcttgagtt ggcgcggtgg
      481 agcaacgcaa aggccggacc cgaacggccc gactaggtgc acgccactgc agcatcggcc
      541 gtggcgggcg ggatcggggg caccgcgcca tagaagatca cgcaggtctg tggcgtgatg
      601 ctggccgcgg tcgcctgggc ggaccagccg gacggcgtgg cactcacgat cgtgatcgtc
      661 acgttgctgg acggccggaa gttgaagctc gggtccggaa tcacaccgct gtagtaggtg
      721 ttgaactcgg tccagtacgt ctcctgggtg ccggccaggt tgcggagatc ggagcgcatg
      781 gcgctcacca ccgccttcgc tttggtgttc gcgaacttcg ggatggcgat cgcggacagg
      841 aggccgatga tcaccaccac gatcagcagc tcgatgaggg tgaaacctct cctggtcgtc
      901 cgcattgcat gcctccgtcg gcggtcagac tgctcgggtg aagcttcggc accgggcgaa
      961 gaaaatgggc ggcggttccc cgccgcccac tctcagcttg ctgcctggaa cgcttggatc
     1021 agtagcagag cggcgcgccc tctgcggtca tcggcgcaac caccggtccg acgaacacac
     1081 cgcagacgtc gctcgcggcg ctggtcacgg ccgggttggt ggcagtggcc gaccaggcgg
     1141 cggcgccgac gtaggccacc acgatggtgt tgttcgccga cgggctgaag gccaggcggc
     1201 cggcgccggc gaggccgttg gtctgggtgt acaccgtgcc gtcgccgaca taggtgccac
     1261 cggcgtagtc ctggttatcc gagaagaacg cctcctgggc ggtgaccagg ttgcgcaggt
     1321 cggacttcat cgaagccacg accgccttct ccttcgtgtt ggcgaacttc gggatcgcga
     1381 tcgcggccag gatgccgatg atgacgacca cgatcaacag ctcgatcagc gtaaagccct
     1441 tgcgattctt catacgtcct ccgagagggt gagcggcggc gtggccgagg ccgactgacg
     1501 ggtgctggtc ggactggccg gtggtagggc aacactggtg ccacccctcg gtagggtgcc
     1561 tcaaccacaa tcacggcagc gggttacggt tgcagcgcgg ctctttgcgc gtgcgccctg
     1621 gagcccagga gaacaggatt ttgcaagagc gccccggggc ggcggaaccc tcggcgaagg
     1681 gggaccgagt ggagcgcaac ggtggggatg acgagcgggc ggtgtgacat ccgatcgacg
     1741 cgcgaaggcg ccagtcctcg cgctccgagc ctcagggagc gggcgggatc acgccttcac
     1801 ttccacctgt tcctcgtacc ggctcagctt gcggtacagg gtcgaggggt cgatccccag
     1861 cacctcggcg gcgcgggtct tgttcccgcc ctccgcctgg agcacccaca tgatgtaggc
     1921 ccgctcgatc acctcgagcg tcgggttgcg gtaggagcgc tccgcgacca gcggctcctt
     1981 gcggcgcttg gtgatgcgct ccggcagcgc ggccgcttcg atcaggttgc cgcggctcag
     2041 caccaccgcg tgctccagcg cgttctccag ctcgcgcacg ttccccggcc actcgtacac
     2101 catgaccgcg tcgagcgcct cggaggcgag cgccttcgcc tcggtgccgc cctcctgcgc
     2161 catgctctgg agaaaggctt ccagcaggag gaggagatcg tcccgccgct cgcgcagggg
     2221 cggcaggttg agcgcgatca cgttgaggcg gtagaacagg tccgaccgga agttgccccg
     2281 gcggatctcc tcctccaggt cccggttggt cgcggcaatg atccggacgt ccaccgggat
     2341 cgcctcggtc gcgcccacgg ggatcgcctc gcgctcctgg agcacgcgga gcagcttcac
     2401 ctgcagcgac ggcggcatct cacccacctc gtcgaggaag aagctcccgc cccgcgcggc
     2461 ggcgaagagg ccctgcttgt cccgcaccgc cccggtgaac gagcccttca cgtgcccgaa
     2521 cagctcgctc tccagcaggt tctcgggcag cgcgccgcag ttgatggaga ggaagggccc
     2581 gtcggcccgg ttggagaggt tgtggatgta gcgggcgatg acctccttgc cggtgccgct
     2641 ctcgccctgg atgagcacgg tggactcggt cggcgacacg tgctccgcca gcttcagcac
     2701 ctccatgaac cgcttcgact tgccgatggg gcgcgcgacc gcggtcttgt cgcgccggcg
     2761 gatctcctgc ttgagctgct tgttctccac ccgcacctgg cggaactcgc aggcgcggcg
     2821 gaggatggcg accagctcgt cgttggagaa gggcttctgg atgtagtaga aggccccgga
     2881 gttgacggcc tggatggcgc tttggagcga ggcctgcgcc gtcatcagga tcaccggcgt
     2941 catcgggtcc tgctcccggg cggcgttcag gatgtcgagc ccggtgacct ggggcatgcg
     3001 tacgtccgag aggatcaggt cgtgcgcgcc ggtccggatc tgctccagcc cggccttgcc
     3061 gccctgggcg gtggtgacct cgaacccttc gttcctgagc aggatcctga gggtgtccag
     3121 gatgcccgac tcgtcgtcga ccaccaggac cgagggcttc tgactcatgc ggcgtcctcc
     3181 gccagcatct tggcgggtag aaagatggtg aaggtggtgc ccgtgcccgg ctcggagtct
     3241 accagaacca gcccgcggtg cgcctcgacc gcacgctgga cgatggcgag cccgagcccg
     3301 cttccccccg tccgcccgga aacgaagggg tcgaagagcc ggtcccggat ctcctccggg
     3361 atgcccggcc cgtcatcccg cacctgcagc cggaccgcgt ggtccaggtt ggtgccgtgt
     3421 gggatctccc ccgccgacac cgatgcgacg ctcacggtga tccggatcgg cccgcgcgcg
     3481 acctgcacgg cgttgaggac cagattggtg atcac
//
LOCUS       DASUYN010000634         2392 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_641636, whole genome shotgun sequence.
ACCESSION   DASUYN010000634 DASUYN010000000
VERSION     DASUYN010000634.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2392)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2392)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2392
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_641636"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..804
                     /locus_tag="VF061_12355"
     CDS             <1..804
                     /locus_tag="VF061_12355"
                     /inference="COORDINATES: protein motif:HMM:NF012343.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HEX6670350.1"
                     /translation="IHGFTVPAGIELGQRIRGYRDGLFGWLRRAPWGDPGFSSLVFSI
                     VVFGFVGGITGVTFGTEQINIIAHNTLRIPGHFHSTVVSGTAMAFMGLTYYVIPLVFR
                     KQLAFYPLARIQPYLFAGGMLVFSMTMTFAGTFGVPRRHWDISFAQAPFDVQFNPAVD
                     LLLGVMAIGGLVAAVGGAIYILVTVWSVFFGKPLEAREGSAAVPPGVHTPIRHAADAD
                     RINDELHSPARGLWGPAPGTLVLVSVFLLAFVLYYFVNWKLLSFVWKVG"
     gene            801..1682
                     /locus_tag="VF061_12360"
     CDS             801..1682
                     /locus_tag="VF061_12360"
                     /inference="COORDINATES: protein motif:HMM:NF014667.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HEX6670351.1"
                     /translation="MNRGSRGLWALGALAAILAITAAWWAFALWPLSPEAPPWVARAR
                     ATCFGVTTTGLPHTGGWLLLIGEPLGMIGLLLAVWGDAVIEGFRGLSRTAVGRVAMAL
                     SALLVAWGGQLAWARIGELRGEPFLLDGAASADAAIERVGRRPPPLRLVDQWGDTITL
                     DRFRGRPVLLTFAYGHCRSVCPATVRRMLGAQRRMPDQLSLLVVTLDPWRDTPERLAH
                     IAEGWGFGDRARVLGGSVEAVRAVLEAWRVPDGRDPHTGEIAHAPTVYAIGRDGRLAY
                     RTAGASEQALVGLAERL"
     gene            1722..>2392
                     /locus_tag="VF061_12365"
     CDS             1722..>2392
                     /locus_tag="VF061_12365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670352.1"
                     /translation="MDIRVRRLLSPLVLLLLPAWSRASAQAAGAMPTYSAAQLHCARF
                     LESSRSDIRTETARGAVEAVTRRDGIWSVRARDTVGGVTLEAWYDSLALRRRAAGEEV
                     TADTDGLIGGRYRGLLGPRGEYVERARPFVPDGVAELADLSGAANDLFPPLPARPLRP
                     GESWADSTRTLSRLPDTVVAGRPLMHLRLQSRTESDAAVPRGDTVPIPVRQTVEEKGD
                     IYWSPG"
BASE COUNT          270 a          862 c          876 g          384 t
ORIGIN      
        1 attcacggct ttaccgtgcc ggcgggcatc gagctggggc agcggatccg cgggtatcgc
       61 gacggcctgt tcggctggct gcgccgggcc ccctggggcg atccggggtt cagctcgctg
      121 gtgttctcga tcgtggtctt cgggttcgtg ggcggcatca ccggggtcac cttcggcacc
      181 gagcagatca acatcatcgc ccacaacacc cttcggattc cgggccactt ccactccacc
      241 gtggtgagcg gcaccgcgat ggccttcatg gggctcacct actacgtgat tccgctcgtc
      301 ttccggaagc agctcgcctt ctacccgctg gcccggatcc agccgtatct cttcgcggga
      361 ggcatgctgg tcttctcgat gaccatgacc ttcgcgggga ccttcggcgt gccccggcgg
      421 cactgggaca tcagcttcgc ccaggcgccg ttcgacgtgc agttcaatcc cgccgtcgac
      481 ctcctgctcg gcgtcatggc catcggcggt ctggtcgccg cggtcggcgg ggcgatctac
      541 atcctggtga cggtgtggtc ggtgttcttc ggaaagccgc tcgaggcgcg cgagggcagc
      601 gccgccgtac cgcccggcgt gcacaccccg atccgccacg cggcggatgc ggaccggatc
      661 aacgacgagc ttcactcgcc cgcgcgaggg ctgtgggggc cggcccccgg cacgctggtg
      721 ctggtgtcgg tcttcctgct cgcgttcgtg ctctactact tcgtcaactg gaagctgctg
      781 tcgttcgtgt ggaaagtggg atgaaccggg gcagccgggg tctgtgggcg ctcggcgcgc
      841 tcgccgcgat cctggcgatc acggccgcct ggtgggcgtt cgccctgtgg ccactctcgc
      901 cggaggcgcc accgtgggtc gcgcgggcgc gcgccacctg cttcggcgtg accaccaccg
      961 gcctgccgca caccggcggc tggctgctcc tgatcgggga gccgctcggc atgatcgggc
     1021 tcctgctcgc cgtctggggc gatgcggtga tcgaggggtt ccgggggttg agccggacgg
     1081 cggtggggcg cgtcgcgatg gcgctcagcg cgctgctggt cgcctggggc ggccagctcg
     1141 cctgggcccg gatcggcgag ttgcggggcg agcccttcct cctcgacggc gccgcctccg
     1201 ccgacgccgc catcgaacgg gtcggccggc ggcctccgcc cctgcggctg gtggaccagt
     1261 ggggcgacac gatcacgctg gaccggttcc gcgggcgacc ggtgctcctg accttcgcct
     1321 acggccactg ccggagcgtg tgcccggcca ccgtgcgccg catgctgggc gcgcaacggc
     1381 gcatgcccga ccagctctcg ctgctggtgg tgacgctgga tccgtggcgg gacacgcccg
     1441 agcgcctggc ccacatcgcg gaaggctggg gcttcgggga tcgggcccgg gtgctggggg
     1501 gctcggtcga ggcggtccgc gcggtgctgg aggcgtggcg ggtgcccgat ggccgggatc
     1561 cgcacaccgg cgagatcgcg catgccccga cggtctacgc gatcggacgg gacggccgcc
     1621 tcgcctaccg gaccgcaggg gcgagcgagc aggcgctggt cgggctggcc gagcggctct
     1681 gaaccgaggc atcgccaccc gccgccgata aattccgccg gatggacatt cgcgtccggc
     1741 gtctcctgag cccgctcgtc ctcctcctcc tcccggcctg gtctcgcgcc tcggcccagg
     1801 ccgccggggc catgccgacg tacagcgccg cccagctcca ctgcgcccgc ttcctcgaga
     1861 gctcccgcag cgacatccgg accgagaccg cacgcggcgc ggtggaggcg gtgacccggc
     1921 gcgacgggat ctggagcgtt cgcgcgcgcg acaccgtcgg cggggtcacg ctggaggcgt
     1981 ggtacgactc gctggcgctg cgccggcgcg cggcggggga ggaggtcact gcggataccg
     2041 atgggctcat cggcggccgc taccgtgggc tgctcgggcc tcggggcgag tacgtcgagc
     2101 gggcgcggcc gttcgttccc gacggcgtcg cggagctcgc cgatctctcg ggcgcagcca
     2161 acgacctctt cccgccattg cccgcgcgcc cgctccggcc cggcgagtcg tgggccgact
     2221 cgacccgcac cctgtcccgg ctgcccgata ccgtcgtcgc cggacggccg ctgatgcatc
     2281 tccggctgca gtcccgcacc gagtcggacg cagcggtgcc ccgcggcgac accgtgccga
     2341 tcccggtgcg gcagactgtc gaggagaagg gcgacatcta ctggtcgcct gg
//
LOCUS       DASUYN010000635         3533 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1966365, whole genome shotgun sequence.
ACCESSION   DASUYN010000635 DASUYN010000000
VERSION     DASUYN010000635.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3533)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3533)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3533
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1966365"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            353..772
                     /locus_tag="VF061_12370"
     CDS             353..772
                     /locus_tag="VF061_12370"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX6670353.1"
                     /translation="MATTSNTIETEILDLERRYWQAMRELDVRTAVALTEFPCLIAGA
                     SGVRSVDQATYEQMMTGGSWRIHDAEIEQGAEVRQLTDDVAVIVYGVREEMTVEGKPL
                     TQRAFDSSVWVRRNDRWRCAMHSESIARDGDRTSAAG"
     gene            996..1421
                     /locus_tag="VF061_12375"
     CDS             996..1421
                     /locus_tag="VF061_12375"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEX6670354.1"
                     /translation="MDREVLAVYRAAGERFEPRWYAVFAALRDDGPLTVGELARRLGI
                     SHAAVSQIRSALEAEDLIRGAADPWDGRRQVLSLTEEGRQTAARLAPLWSAIAAAVGD
                     LLAEHAPTLPADLDALEQAVEARGLAARIGPTLDQDIAQ"
     gene            1418..2776
                     /locus_tag="VF061_12380"
     CDS             1418..2776
                     /locus_tag="VF061_12380"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEX6670355.1"
                     /translation="MTTRHGPLAAGFSLLLAAAPHFGPAAEPARAQQAPPDRSPAAAR
                     LSSSDRASAMGAIRQVLAKEYVFPEMRAKLVERLSRAEKDGRYDVEQPHLFAERITED
                     LRDVARDGHLWLQHAPAQYAAAVASPASDRGSEAFAARRAVRSHHGLAELRILPGNIR
                     YLKVTAFEWIADETGIAYDGAMRFLRQGDAAIIDLRGNGGGHPAAVQYLISHFLPPDT
                     LLLTFHQGSETPIQSRTLNHLPAGRLRGKPLYVLIDGGVASAAEELAYHVQQFKLGEL
                     VGRRTAGGANNNRLVPVAPAFLLSVSVGRPVHAVSGTNWEGEGIAPTVEAPSARALEV
                     AESMALARLAEAHAGDTELTAEYAWARPAVEARLRPVTISAEQLRRLAGDYGEVRIEL
                     REGALWLVQPEREARRLLPMTADGLFAVEALDVMRVRFRGKALELLRMGAPKARVFPR
                     SR"
     gene            complement(2861..>3533)
                     /locus_tag="VF061_12385"
     CDS             complement(2861..>3533)
                     /locus_tag="VF061_12385"
                     /inference="COORDINATES: protein motif:HMM:NF017496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HEX6670356.1"
                     /translation="VTLSEAKGAIHAFTLPRFRPMVTGAAELPTHSAEPTFMSMPDTF
                     TPVYWTADMARRLPEDGNRYEVVYGELLVTPAPRLWHQELVRRLVVALAQYLEANPLG
                     LVLTSPADISWGADVLVQPDVFVVPTEQARTLEWSAVRDLLLVAEVLSPSTPRHDRFT
                     KRRRYQEAGVPLYWIVEGDERQVEVWTPGDAFPRIERDRLVWQPEGAGGRFTLALQEL
                     FRAIG"
BASE COUNT          543 a         1197 c         1275 g          518 t
ORIGIN      
        1 tgatatcccc tgaagacaca atggcaatga cggctcccgg gcggcgtgag gcagcacact
       61 gaggcctcct ggcccctcgc ttggcagccg aatggtctcc cgctcctgcg ggcacctgaa
      121 aggttcggcc tctgggtcac gaccctcctc agcattggcg gcctgctggt cgctatcctc
      181 agcaccgcac caaacgcagc acctttcagg tgcccgcggg agcgggagac attcggatgc
      241 caagcgatgg ggtccaggcc gcctcagtgt gctgcctcac gccgcccggg atccgtcatt
      301 gccattgtgt cctcagggga tatcatctct cccagcccga aggaggcgca gaatggcgac
      361 cacgagcaac accatcgaga ccgagatcct cgacctggag cggcggtact ggcaggcaat
      421 gcgcgagctc gacgtccgga cggcggtggc gctgaccgag ttcccttgcc tcatcgccgg
      481 tgcgagcggc gtgcgttccg tggaccaggc gacctacgag cagatgatga ccggcggctc
      541 ctggcggatc cacgacgcgg agatcgagca gggggccgag gtccggcagc tcaccgacga
      601 cgtggcggtg atcgtctacg gagtgcgcga ggagatgacg gtcgagggga agccgctcac
      661 ccagcgcgcg ttcgacagca gcgtctgggt tcgccgcaac gaccggtggc gatgcgccat
      721 gcactccgag tccatcgcgc gcgacgggga tcggacatcg gcggcgggct gagcgttggc
      781 gccctgtcac cctgagcgaa gcgaagggga ccatgctcga tacggtcccc ttcgcttcgc
      841 tcagggtgac aaacaggact ggccgccctc caccaacctc gacaaaggtt gacttggggc
      901 cacgaaatcg gtaatgtctt acacatatca tgcaagccac tcccttacct gatcttacgg
      961 cgttcggttc ccgccttcgc cggctgctcg agcggatgga tcgcgaggtc ctggcggtgt
     1021 atcgcgccgc cggggagcgg ttcgagcccc gctggtacgc ggtcttcgcc gcgcttcggg
     1081 acgacggccc cttgaccgtc ggggagctcg cccgtcggct cggcatctcc cacgcggccg
     1141 tgagccagat ccgctcggcg ctggaggccg aggacctgat ccggggcgcg gcggacccgt
     1201 gggacgggcg gcgccaggtg ctctcgctca ccgaggaggg ccgccagacc gccgcgcgcc
     1261 tggcgccgct ctggtccgcc atcgccgcgg ccgtgggcga cctgcttgcc gagcacgccc
     1321 ccacgctgcc ggccgacctc gatgcgctgg agcaggcggt cgaagcgcgc gggctcgccg
     1381 cccgcatcgg cccgactctc gaccaggaca tcgcccaatg accactcgcc atgggccgct
     1441 cgcggccggc ttctccctcc tcctcgcggc ggcccctcac ttcggaccgg ccgccgaacc
     1501 cgcacgcgcc cagcaggcgc ccccagaccg ctcgccggcg gccgcccggc tctcctcttc
     1561 cgaccgggcg agcgcgatgg gcgcgatcag gcaggtactg gcgaaggagt acgtgttccc
     1621 cgagatgcgg gcgaagctgg tggagcggtt gagccgggcg gagaaggacg gacgctacga
     1681 cgtggagcag cctcacctct tcgccgagcg gatcaccgag gacctgaggg acgtggcgcg
     1741 cgacgggcat ctgtggctgc agcacgcgcc ggcgcagtat gccgcggcgg tggcgtcacc
     1801 ggcgagcgat cgcggctcgg aggcgttcgc ggcgcgccgg gcggtgcggt cgcatcacgg
     1861 tctggcggag ctgaggatcc ttccggggaa catccgctac ctgaaggtca cggccttcga
     1921 gtggatagcc gacgagaccg gaatcgccta cgacggcgcg atgcggttcc tgcggcaggg
     1981 cgacgcggcc atcatcgacc tgcggggcaa cggcggcggg catcccgcgg cggtgcagta
     2041 tctcatcagt cacttcctgc cgcccgacac gctgctgctg acgttccacc agggctcgga
     2101 gaccccgatc cagtcgcgca cgctgaacca tcttccggcg ggacgtctcc gcgggaagcc
     2161 gctgtacgtg ctgatcgacg gaggcgtcgc atcggcggcg gaggagctcg cgtatcacgt
     2221 gcagcagttc aagctgggcg agctggtcgg gaggaggacg gcgggaggag cgaacaacaa
     2281 ccggctggta ccggtggcgc ccgcgttcct gctcagcgtc tcggtgggtc ggccggtcca
     2341 cgcggtgagc gggaccaact gggaaggcga gggtatcgcg cctaccgtgg aggcgccctc
     2401 agcccgtgcg ctcgaggtgg ccgagtcgat ggcgctcgcg cggctggcgg aggcgcacgc
     2461 gggggatacg gagcttaccg cggagtatgc ctgggcccgc cccgcggtgg aggcgaggct
     2521 ccgcccggtg acgatttcgg cggagcagct gcgcaggctg gccggggact acggcgaggt
     2581 gcggatcgag cttcgcgagg gcgccctgtg gctggtgcag ccggagcgcg aggcgaggcg
     2641 cctgctgccc atgacggccg acgggctgtt cgcggtggag gcgctggacg tcatgcgggt
     2701 acggttcagg ggcaaggcgc tcgagctgct gcggatgggc gcgccgaaag cacgggtgtt
     2761 cccgcggtca cgctgagcga agacagcgct cctccgcgta ctgcaccagc agccgaccac
     2821 gatcgccgcc gcgtgatgcg cagccgcctg cttcacagcc tcacccgatt gcccggaaca
     2881 gctcctgaag cgccaacgtg aaccggccgc cggccccctc cggctgccag acgagccggt
     2941 ctcgctcgat gcgaggaaag gcgtcgccgg gggtccagac ctcgacctgc cgttcatcgc
     3001 cctcgacgat ccagtagagc gggaccccgg cctcctggta gcggcgacgt ttggtgaagc
     3061 ggtcatggcg cggcgtggat gggctcagca cttcggccac cagcagcaga tcgcgtacgg
     3121 cgctccactc gagcgttctc gcctgctccg tcggcaccac gaacacgtcc ggctgcacca
     3181 gcacgtccgc tccccacgag atgtcggcgg gcgaggtcag gaccaggccg agcgggttgg
     3241 cctcgaggta ttgggcgagg gcaacgacca ggcgccggac gagctcctga tgccagagcc
     3301 gcggtgcggg ggtcaccagc agctcgccgt agaccacctc gtagcggttg ccgtcctcgg
     3361 ggaggcggcg ggccatgtcc gcggtccagt agaccggggt gaaggtgtcc ggcatggaca
     3421 taaaggtcgg ctcggcgcta tgggttggca actcggcggc acccgtcacc atggggcgaa
     3481 aacgcgggag ggtgaaggcg tggatggccc ccttcgcttc gctcagggtg aca
//
LOCUS       DASUYN010000636         6807 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_860249, whole genome shotgun sequence.
ACCESSION   DASUYN010000636 DASUYN010000000
VERSION     DASUYN010000636.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6807)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6807)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6807
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_860249"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..628)
                     /locus_tag="VF061_12390"
     CDS             complement(<1..628)
                     /locus_tag="VF061_12390"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX6670357.1"
                     /translation="MRVLMFGWEFPPFQAGGLATATHGLVKGLLSGGIEVTLVVPFAA
                     PESDLSGLRLVSAAGPRAGLRTIQVASPLQPYASAEEYAVLSGARRGTTGRSVYGQDL
                     FEEVERYADIAAAIAAEEPHDLIDTHDWITFAAGERARAVSGKPFVAHIHATEYDRCG
                     GHGNPEIHRREAEGMLAADRIVSNSAMLRRRVEESYRIPAARMEVVHFG"
     gene            complement(693..2045)
                     /locus_tag="VF061_12395"
     CDS             complement(693..2045)
                     /locus_tag="VF061_12395"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX6670358.1"
                     /translation="MGSRRRSRSHESRVFTGALGLGLPAIAVASWLLWTGDYPLRTQL
                     TFTLIPVGAWLIGAFLLRERVVRPLQTISNLLAALREGDYSIRARGASPDDALSLALL
                     EVNALSETLRGQRLRELEATALLRRVMEEIDVAVFAFDGERRLRLVNREGERLLGQPA
                     ERLIGRPSDVLGLGDWLDGESPRTFDATFPGGAGRWEVRGGTFRQDGLPHQLLVISDL
                     SRVLRAEERLAWQRLVRVLGHEINNSLAPIKSIAGSLRNLAARQVRPADWEHDLRSGL
                     EVIEGRSEALGRFMGAYARLARLPQPTPEPVDVGAWVRRVAALETRLEVRVAGGPAVT
                     VPADGDQLDQLLINLVRNAADAALETGGGVEVGWRVRSGALEVVVIDEGPGLPDPGNL
                     FVPFFTTKASGSGIGLVLSRQIAEAHGGALTLEPSAEGRGARACLRLPLVARRDASPS
                     "
     gene            complement(2035..3402)
                     /locus_tag="VF061_12400"
     CDS             complement(2035..3402)
                     /locus_tag="VF061_12400"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEX6670359.1"
                     /translation="MPTSPPIAHILVADDQPHVREALRLLLKGEGYAIETAASPAAVL
                     SAVQGSDFDAVLLDLNYARDTTTGREGLELVSQLQALDATLPTVVMTAWGSVEKAVEA
                     MRRGARDFIEKPWDNNRLLATLRTQVELGRALRSTRRLESENRLLRRDGAPELIAQSA
                     AMRPVLQLMDRVAAADANVLISGEHGTGKEVVAQWLHAASPRAARPLVAVNLGGLSEG
                     LFESEMFGHVKGAFTDARTDRIGRFELAEGGTLLLDEIGTLGLRQQAKLLRVLETGEV
                     ERVGASRPRRIDVRILSATNADLPAEVAAGRFREDLLFRLNTIEIRLPPLRERREDIR
                     ALAEHFLGRYAARYRKALVGLEPEAIDALETHAWPGNVRELDHTMERAVLMAQGTTVR
                     GPDLGLRGGPGPVPRLEDLPLEEVERLLIRKALERHGGNVSQAAKALGLSRSALYRRL
                     QHYGL"
     gene            complement(3526..4215)
                     /locus_tag="VF061_12405"
     CDS             complement(3526..4215)
                     /locus_tag="VF061_12405"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX6670360.1"
                     /translation="MIRLANLDRWYETGPTRTYVLRRINLEIREGEFVTIMGPSGAGK
                     STLLSILGMLDNAWAGEYWFLDQPVHELPARKRVELNKKHIGFVFQKYHLIDDLTVYE
                     NLEIPLSYRDIKPKERAGIVAETLDRFQIVGKKDLYPSQLSGGQQQLVGVARAVIAGP
                     RLLLADEPTGNLHSAQGEEIMELFTRLNRQGTTIVQVTHSERNASYGHRTIQLHDGWV
                     VQGQEAGALKA"
     gene            complement(4547..>6807)
                     /locus_tag="VF061_12410"
     CDS             complement(4547..>6807)
                     /locus_tag="VF061_12410"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX6670361.1"
                     /translation="LGEGAQSLPAVSPLDFRDYKERSRTIEDFAAAAEGNVANLRGNL
                     TGDGEPERADIVTVTANFFPLLGVRPALGRQFLPEEEVVNGPHVIMISHRLWQRRWAG
                     DPSLVGKTIQIDGVAHEVVGILPRDFSLQLPKEAFQVTDGDLWAPIQFDYGQPLPRNL
                     TFFTVFGRLAPGVTMAQAQAEMHMIAEQFRSEFPEHKASNLRIRAVPLHYDVVKHARP
                     ALLVLLGAVGMVLLIACANVANLLLVRGTTRQAEFALRTALGASRGAMIRQVLTESLL
                     LALAGGALGLGITLAALEVLRRLHPANLPRLSDIQMDGTVLAFTVAICALTSVLFGLV
                     PALRAAGADPQEHLKAGGRGGSGGDRRRARALLIVAEVALSVVLLVGAGLLIRSFLAL
                     QRVDPGYDGGDVLTFELSMPFGKYPGGASRRAFFRQLSEKLESVPGVTTVGLVSQLPL
                     TGSGPLSPFAYDEETARNFESVTADGRNVSPEYFEAMDAKLLAGRTFTYQDSAGTPPV
                     IMVDETLAKLAWPGENAVGKQLQLQPTGTPNGFAEVVGVVEHMRQHDLTRDILHQIYY
                     PIGQGTPTVMTFVVETTLDPVSLVPTVRRTVADMDADLPVSRLTPMSSYLAEGQAHAR
                     FSLVLMSVLGAVALVLTAVGVFGVISYSVSQRTREFGIRLALGEDPRRTRLSVVLGGM
                     RLVLVSIAIGLVGSLAVTRLIAGLLYDVSPADPITFAGIGLLLAGVALLACYLPARRA
                     TRVDPALALRSE"
BASE COUNT         1004 a         2484 c         2334 g          985 t
ORIGIN      
        1 tgccgaagtg caccacctcc atccgcgccg ccggaatccg gtacgattcc tccacccgcc
       61 gccgcagcat cgcgctgttg ctcacgatcc ggtccgccgc cagcatgccc tcggcctccc
      121 gccggtggat ctcggggttg ccgtgcccgc cgcagcgatc gtattcggtc gcgtggatgt
      181 gggccacgaa cggtttcccg gagaccgcgc gggcccgctc accggcggcg aaggtgatcc
      241 agtcgtgggt atcgatcagg tcatgaggct cctccgccgc gatcgccgcc gcgatgtcgg
      301 cgtagcgctc gacttcctcg aacaggtcct ggccgtacac cgagcgtccc gtcgtgccgc
      361 ggcgggcccc actcagcacg gcatactcct cggcgctcgc gtagggctgg agcggcgacg
      421 ccacctggat ggtgcgaagc cccgcccgcg gccccgccgc gctcaccagc cgcaggccgc
      481 tcagatcgct ttccggggcg gcgaacggta ccaccagcgt gacctcgatg ccgccggaga
      541 gcagtccctt gaccaggccg tgggtggcgg tcgccagacc gccggcctgg aacgggggaa
      601 actcccagcc gaacatcagg acgcgcatgg agccggagac ctcggtggag ggggacgcgg
      661 gaggtaacgc gaaggcggtg gggcgggttc catcagctcg ggctcgcgtc cctcctcgcg
      721 accagcggca gccgcaggca cgctcgcgcc ccccgccctt ccgcactcgg ctccaacgtg
      781 agcgcgccgc cgtgcgcctc cgcgatctgg cggctcagca ccagaccgat gcccgagccg
      841 ctcgccttgg tggtgaagaa ggggacgaac aggttgccgg gatcgggaag cccgggcccc
      901 tcgtcgatca cgacgacctc cagtgcccca cttctcaccc gccatccgac ctcgacgccg
      961 ccgcccgtct ccagggccgc atcggccgcg ttccgcacca ggttgatgag cagctggtcg
     1021 agctgatcgc cgtccgccgg aacggtgacc gccggcccgc cggccacccg cacctcgagt
     1081 ctcgtctcca gggccgcgac gcgccgcacc caggcaccca cgtccaccgg ctcgggtgtg
     1141 ggctgcggca gacgtgcgag gcgcgcatag gcgcccatga agcggcccag cgcctccgag
     1201 cgaccttcga tcacctccag ccccgagcgc aggtcgtgtt cccagtcggc gggacggacc
     1261 tggcgcgcgg ccaggttgcg cagcgagccg gcgatggact tgatcggcgc gagggagttg
     1321 ttgatctcgt ggcccagcac ccgcaccagc cgttgccagg ccagccgctc ctccgcccgg
     1381 agcacccggc tcaggtcgga gatcaccagc agttgatggg gaagcccgtc ctgccggaag
     1441 gtgccgcccc gcacctccca gcgaccggcc ccaccgggaa aggtcgcatc gaaggtccgg
     1501 ggactctcac cgtcgagcca gtcgccgagg ccgaggacgt ccgacggccg gccgatgagc
     1561 cgctccgccg gttgcccgag cagtcgctcg ccttcgcggt tcaccagacg gagccgccgc
     1621 tcgccgtcga aggcgaacac ggcgacgtcg atctcctcca tgacccggcg aagcagcgcc
     1681 gtcgcctcca gctcgcggag ccgctgaccc cgcagggtct cgctgagcgc attcacctcg
     1741 agcagcgcga gactcagggc gtcgtccggg ctggcgcccc gcgcgcggat ggaatagtcg
     1801 ccctcccgca gcgccgcgag caggttggag atggtctgca gcggccggac cacccgctcg
     1861 cgcaggagga acgcgccgat gagccaggca ccgacgggga tgagggtgaa cgtgagctgg
     1921 gtgcggaggg gatagtcgcc ggtccagagc agccagctcg ctaccgcgat cgcggggagc
     1981 cccagcccga gggcgccggt gaagacccgg gactcgtggc tgcgggaccg ccgcctagag
     2041 cccatagtgc tggagtcggc ggtagagcgc gctgcggctc agtcccagcg ccttcgccgc
     2101 ctggctcacg ttgcctccat ggcgctccag cgccttgcga atgagcaggc gctcgacctc
     2161 ctccaggggc aggtcctcca gccggggcac cggcccgggt ccgccgcgca ggccgagatc
     2221 ggggccccgc accgtcgtcc cctgcgccat caacacggcg cgctccatcg tgtggtccag
     2281 ctcccggacg ttgccgggcc aggcgtgggt ctccagcgcg tcgatcgcct cgggctccag
     2341 gccgaccagc gccttccggt agcgcgcggc gtagcggccg agaaagtgtt cggcgagcgc
     2401 gcggatgtcc tcccgccgct cgcgcagggg cggcaggcgg atctcgatcg tgttgagccg
     2461 gaacagcaga tcctcgcgga accgcccggc cgccacctcg gcggggaggt cggcgttggt
     2521 ggcggagagg atccggacgt cgatccgacg cggccgcgag gcgccgaccc gctccacctc
     2581 gccggtctcc agcacgcgca gcagcttggc ctgctgccgc aggcccagcg tcccgatctc
     2641 gtccagcagg agcgtcccgc cctcggccaa ttcgaagcgg ccgatccggt cggtacgcgc
     2701 gtcggtgaac gcccccttca cgtggccgaa catctcgctc tcgaagaggc cttccgagag
     2761 gccgccgagg ttcaccgcga ccaggggccg cgccgcgcgc ggcgacgccg cgtggagcca
     2821 ctgcgcgacg acctccttgc cggtgccgtg ctctccgctg atgagcacgt tggcgtcggc
     2881 ggcggccacc cggtccatga gctggagcac cggccgcatc gccgcggact gcgcgatcag
     2941 ctccggggcc ccgtcgcggc gcagcagccg gttctccgac tccaggcggc gggtgctccg
     3001 gagcgcgcgc cccagctcca cctgggtccg cagcgtggcc agcagccgat tgttgtccca
     3061 cggcttctcg atgaagtccc gcgcgccccg ccgcatcgcc tcgaccgcct tctccacgct
     3121 gccccacgcc gtcatcacca cggtcgggag cgtggcgtcg agcgcctgga gctgggagac
     3181 cagctccagt ccctcccggc cggtggtggt gtcgcgggcg tagttcaggt cgaggaggac
     3241 ggcgtcgaaa tcggagccct gcaccgccga aagcaccgcg gcgggcgagg cggcggtctc
     3301 gatggcgtag ccttccccct tgagcaggag gcggagggcc tcgcggacgt gcggctggtc
     3361 gtccgcgacg aggatgtggg cgatgggagg ggaggtaggc acgggctgtc ggaatgtaca
     3421 gaaaggcgtg aaacgtgaac agtgaaaggt ggaacggggt tcgtcgcgaa ccgatcggct
     3481 ttcccctttc acctttcact gttcacgttt cacgcgtttc gcgcctcacg ccttcagcgc
     3541 cccggcctcc tggccctgca ccacccaccc gtcgtgcagc tggatcgtcc ggtgcccgta
     3601 gctcgcgttg cgctcggagt gggtcacctg gacgatcgtc gtcccctgcc ggttgagccg
     3661 ggtgaacagc tccatgatct cttcgccctg cgcgctgtgc aggttgccgg tgggctcgtc
     3721 ggccaggagc aggcggggac ccgcgatcac cgcccgggcc accccgacca gctgctgctg
     3781 acccccggag agctggctgg gatagaggtc cttcttgccc acgatctgga accggtccag
     3841 ggtctccgcc acgatccccg cccgctcttt gggcttgatg tcccggtagg agagcgggat
     3901 ctccaggttc tcgtacaccg tgaggtcgtc gatcaggtgg tacttctgga acacgaagcc
     3961 gatgtgcttc ttgttcagct ccacccgctt cctcgccggc agctcgtgca ccggctggtc
     4021 gaggaaccag tactcgcccg cccaggcgtt gtcgagcatg cccaggatgc tcagcagggt
     4081 ggacttcccc gccccggacg ggcccatgat ggtgacgaac tcgccctccc ggatctccag
     4141 gttgatgcgg cggagcacgt aggtgcgggt cgggccggtc tcgtaccagc ggtcgagatt
     4201 cgcaaggcgt atcacggtgt cgtcctgggc tagtgtttgt cttcttgtca ccctgagcgc
     4261 agcgaagggg gcatacccaa gtactactct gccactttcc ggttgttgag ccgcagatga
     4321 acgcagaaca cgcaggaggc gcgtgttcca gaagcagaga gcgcagggtt gcaccaccta
     4381 ccctcaccta ctcctgtact ctctgcgttc atctgcggct catcccctcg actgttgcct
     4441 tcaccggtac atcacccaac actcacagac cgcaggacca gccgaccgac cgtgggggag
     4501 tagaaccagc tcatgcccct tcgctcgctc agggtgacac tgatgctcat tcgctccgca
     4561 gcgccagcgc gggatccacc cgtgtggccc gccgcgcggg caggtagcac gccagcagcg
     4621 ccaccccggc gaggagcagc ccgatccccg cgaacgtgat cggatcggcc gggctcacgt
     4681 cgtagagcag ccccgcgatc agcctcgtca ccgcgagaga gcccaccagc ccgatcgcga
     4741 tgctgaccag caccagccgc atcccgccca gcaccacgct gagccgggtg cgccggggat
     4801 cctcccccag cgccagccgg atcccgaact cgcgggtgcg ctggctgacc gagtaggaga
     4861 tgaccccgaa cacgcccacg gccgtgagca ccagcgccac cgcgcccagg acgctcatca
     4921 gcaccaggct gaagcgcgcg tgcgcctgtc cttcggcgag atagctgctc atcggcgtca
     4981 gccggctcac cggcaggtcg gcatccatgt cggccaccgt ccgccgcacg gtgggaacga
     5041 ggctcacggg gtcgagcgtg gtctccacca cgaaggtcat gacggtcggc gtgccctgcc
     5101 cgatcgggta gtagatctgg tgcaggatgt cgcgggtgag gtcgtgctgc cgcatgtgct
     5161 cgacgacgcc cactacctcg gcgaagccgt tcggggtgcc ggtcggctgg agctggagct
     5221 gcttgcccac ggcgttctcc cccggccagg cgagcttcgc cagggtctcg tccaccatga
     5281 tgaccggcgg cgtgccggcc gagtcctggt aggtgaaggt gcggccggcc agcagcttcg
     5341 cgtccatggc ctcgaagtac tccggcgaga cgttccgccc gtcggcggtg acgctctcga
     5401 agttgcgcgc cgtctcctcg tcataggcga agggagagag cggcccgctg ccggtgagcg
     5461 ggagctggga gaccagcccc accgtcgtga cgcccggcac cgactccagc ttctcgctca
     5521 gctggcggaa gaacgcccgg cgggacgcgc cgccgggata cttgccgaac ggcatcgaga
     5581 gctcgaacgt gagcacgtcg ccgccgtcgt agcccgggtc cacccgctgg agcgcgagga
     5641 agctccggat caggagcccg gcgcccacca ggagcacgac cgagagcgcg acctccgcca
     5701 cgatcagcag cgcccgcgcc cgccggcggt cgccgccgct gcccccgcgt ccgcccgcct
     5761 tgaggtgctc ctgcgggtcg gcacccgccg cgcggagggc cggcaccagc ccgaagagca
     5821 ccgaagtcag cgcacagatc gcgaccgtga aggcgagtac cgtgccgtcc atctggatgt
     5881 cggacagcct ggggaggttg gcggggtgga gccggcggag cacctccagc gccgccaggg
     5941 tgatccccag gccgagcgcc ccgcccgcga gcgcgagcag caggctctcg gtcagcacct
     6001 ggcggatcat cgccccgcgg ctcgcgccca gcgcggtgcg gagcgcgaac tccgcctgcc
     6061 gggtggtccc ccgcaccagc agcaggttgg ccacgttggc gcaggcgatc agcagcacca
     6121 tgcccaccgc gccgagcagg accagcagcg ccgggcgggc gtgcttcacc acgtcgtagt
     6181 gcagcggcac cgcgcggatc cggaggttgg aggccttgtg ctccggaaac tccgagcgga
     6241 actgctccgc gatcatgtgc atctcggcct gcgcctgcgc catcgtgacg cccggcgcca
     6301 gccggccgaa cacggtgaag aaggtgaggt tgcggggcag cggctggccg tagtcgaact
     6361 ggatcggcgc ccacaggtcg ccgtcggtga cctggaaggc ctccttgggg agctggaggc
     6421 tgaagtcgcg cggcaggatg ccgacgacct cgtgggccac gccgtcgatc tggatggtct
     6481 ttcccaccag cgaagggtcg ccggcccagc ggcgctgcca gagccggtgg ctgatcatga
     6541 tcacgtgcgg cccgttcacc acctcctcct cgggaaggaa ctggcgtccg agggccggcc
     6601 ggaccccgag cagcgggaag aagttggcgg tcacggtgac gatgtcggcc cgctccggct
     6661 cgccgtctcc ggtcaggttc ccccgcagat tggcgacgtt tccctccgcc gccgccgcga
     6721 aatcctcgat ggtgcggctc cgctccttgt agtcgcggaa gtcgagcggc gacaccgcgg
     6781 gcagcgactg ggccccctcg cccaggt
//
LOCUS       DASUYN010000637         2220 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1967222, whole genome shotgun sequence.
ACCESSION   DASUYN010000637 DASUYN010000000
VERSION     DASUYN010000637.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2220)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2220)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2220
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1967222"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..415
                     /locus_tag="VF061_12415"
     CDS             <1..415
                     /locus_tag="VF061_12415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX6670362.1"
                     /translation="SAEFLRFGSIHRNSYLNSPASLGPALTAPDDDQLFFAGQLTGVE
                     GYTESLGTGLLAGINLARRLCGRPAAVPPPTTMLGGLYRYLRDADPKHFQPMNANFGL
                     LEPLATTGRVAKDRKRVLLVERAQADLSDWLSEVG"
     gene            451..1329
                     /locus_tag="VF061_12420"
                     /pseudo
     CDS             451..1329
                     /locus_tag="VF061_12420"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009037 - tyrosine-based site-specific
                     recombinase activity [Evidence IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA];
                     GO_process: GO:0007049 - cell cycle [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
     gene            1372..1920
                     /gene="hslV"
                     /locus_tag="VF061_12425"
     CDS             1372..1920
                     /gene="hslV"
                     /locus_tag="VF061_12425"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013939585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004298 - threonine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0051603 - proteolysis involved in protein
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HEX6670363.1"
                     /translation="MTPFHGTTILAVRKDGRLALGGDGQVSIGDTVVKSNSTKVRTLK
                     GGKVLAGFAGSVADALTLYEKFEEKLDRYPGNLPRAAVELAKDWRSDRVLRRLEALLV
                     VADLEHSFLLSGSGELIEPDDGVVAVGSGGNFALAAARALLPVPGHSARDIVQRSMEI
                     AADICVFTNRHVTILELPNGKA"
     gene            1937..>2220
                     /locus_tag="VF061_12430"
     CDS             1937..>2220
                     /locus_tag="VF061_12430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670364.1"
                     /translation="MTDIAVTTAPPPEPVSDTPPPPPWLEEMPPRQIVSELDRYIVGQ
                     DAAKKAVAIAVRNRWRRAQAPDDIRDEITPYNIIMIGPTGVGKTEVARRLA"
BASE COUNT          349 a          779 c          784 g          308 t
ORIGIN      
        1 gtcggccgag ttcctgcgct tcgggagcat ccaccgcaac tcgtacctca acagtcccgc
       61 gtcgctcggc cccgcgctca ccgcgccgga cgacgaccag ctcttcttcg ccggccagct
      121 caccggcgtc gagggttaca ccgaatcgtt ggggacggga ctgctcgccg gcatcaacct
      181 ggcgcggcgc ctctgtggcc ggcccgcggc ggttccgccg cccaccacga tgctgggcgg
      241 cctctatcgc tatctccgcg acgccgaccc gaagcacttc cagccgatga acgcgaactt
      301 cgggctgctg gagccgctgg cgaccacagg acgagtcgcc aaggaccgga agcgggtgct
      361 gctcgtcgag cgggcgcagg cggacttgtc ggactggctc tcggaggtcg ggtgagggtg
      421 cccaggcgga aggaggtcgc ggagttcctg acccacctgg agaaggagaa ggaccagtcg
      481 ccccacaccg tgaaggccta cggccgggac ctggaggcgt tcaccgagtt ctgcgaccgg
      541 cactacggcg gccgctggaa gtggagcacc gtggaccggc tcggcatgcg cggcttcctc
      601 ggcgagctgc agcggaaggg gttgtcgaag cggtcggccg cccggtcgct ctcggcggtg
      661 cggaccttct accgttttct ccagctgcac cacggcatcc cgaacgccgc cgcgcgggcc
      721 gcgaaggtgc ccaggatcga gaagcggctg cccacctacc tcgatctcga gcacaccgag
      781 acgctgttcg agtgggcgga aggccgcgcg gcgggcgacg agttcggccc cacccgggac
      841 ctcgcgatgc tggagctgtt ctactccacc ggcatccggc tctccgagct gagcgggatg
      901 aacctggagg acctggacct gctcgcggac caggccaagg tgcgggggaa gggccgcaag
      961 gagcggatcg tgcccctggg ctcgcgcgcc gtcctcgcgc tcaggcgcta tcttaacctc
     1021 cgcgaggagc tggttgcgcg ggtcggtggg gatcggcggg ccgtgttcgt cacccggcgg
     1081 gggaggcgat tggcgccccg ggcggtccag cgctcggtgc acgccatgtt cgacgcggtg
     1141 ggcggcgacg ggctccgggt ccactcgctg cgccacacct tcgccaccca catgctcgac
     1201 gcgggggcgg acctgcgggc ggtgcaggag ctgctgggcc acgcctcgct cagcacgacg
     1261 caggtgtaca cccatacgag cgtggagcgg ctgaagaagg tctaccagca ggcgcacccg
     1321 agggcgtagg gcagcaggac aacgtcatcc tgagcgcagg caaggagccc agtgaccccg
     1381 tttcacggca ccaccattct cgcggtccgc aaggacggcc gcctcgccct cggcggggac
     1441 ggacaggtga gcatcggcga cacggtggtg aagtcgaact ccaccaaggt ccgcacgctg
     1501 aagggcggca aggtgctggc gggcttcgcc ggctcggtcg cggacgcgct cacgctctac
     1561 gagaagttcg aggagaagct cgaccgctac ccgggcaacc tgccgcgggc ggcggtcgag
     1621 ctggccaagg actggaggag cgaccgggtg ctccggcgcc tcgaggcgct gctcgtcgtg
     1681 gccgacctgg agcacagctt cctgctgagc ggctcgggcg agctgatcga gccggacgac
     1741 ggggtcgtcg ccgtcggctc gggcggcaac ttcgccctcg cggccgcccg ggcgctgctg
     1801 ccggtaccgg gccacagcgc ccgggacatc gtccagcgct ccatggagat cgccgccgac
     1861 atctgtgtct tcaccaacag gcacgtcacc atactcgagc ttccgaacgg gaaggcgtga
     1921 tgtcacgccg tcgcacatga ccgatatcgc cgtcaccacc gctcctccgc ccgaacccgt
     1981 ctccgacacc cctccgccac caccctggct ggaggagatg ccgccgcggc agatcgtatc
     2041 cgagctcgac cgctacatcg tcgggcagga tgccgcgaag aaggcggtcg ccatcgcggt
     2101 ccggaaccgc tggcgccgcg cccaggcgcc ggacgacatc cgcgacgaga tcaccccgta
     2161 caacatcatc atgatcggcc cgacgggggt cgggaagacc gaggtcgcgc gccggctggc
//
LOCUS       DASUYN010000638         2206 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_861127, whole genome shotgun sequence.
ACCESSION   DASUYN010000638 DASUYN010000000
VERSION     DASUYN010000638.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2206
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_861127"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            205..567
                     /locus_tag="VF061_12435"
     CDS             205..567
                     /locus_tag="VF061_12435"
                     /EC_number="4.2.1.96"
                     /inference="COORDINATES: protein motif:HMM:NF002017.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008124 -
                     4-alpha-hydroxytetrahydrobiopterin dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006729 - tetrahydrobiopterin biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4a-hydroxytetrahydrobiopterin dehydratase"
                     /protein_id="HEX6670365.1"
                     /translation="MPATKERTYNETEIAEKLKDLPGWYYEDGWIRRVYKTDGWPTTL
                     MLVNAVGYLAEAAYHHPDLTVTWGRIIVKLQNHAAGGISDKDFELARKIEESVLWRPQ
                     GGALEGTPNKWVRSGDPR"
     gene            659..2125
                     /locus_tag="VF061_12440"
     CDS             659..2125
                     /locus_tag="VF061_12440"
                     /inference="COORDINATES: protein motif:HMM:NF040121.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6513 domain-containing protein"
                     /protein_id="HEX6670366.1"
                     /translation="MTAAVPPSRHPAAPPYRRVLFVTGKLAEPALRRVLEEMRPSFEA
                     QVAVLRITVAALMTTPWIARFLEVPPDTDLVLLPGLCEGDLAVVREKFGVPVEKGPKD
                     LREIPGYFGQAAAAADYGGYRIEILAEINNAPRLSRRDILAAAEYFRASGADLIDIGC
                     TPGLAFPELGEVVRDLRAAGLRVSIDSFDPAEIRAAVAAGAEMVLSLNRSNLDVGRAL
                     RGTGASAVLIPDLGEGIDTLGPSIEALEGWGVPYLLDPIVEPIGFGFMASLERYAEVR
                     RRYPDAGQMMGIGNITELTSADSTGVNALLIAICEELGVRAVLTTEVIPWARGAVREI
                     DVARRLMHHAISHRTIPKGVDDRLLTVKDPVVLEYDEAELRRLHQAVTDPNFRIFADR
                     TTITVFNDSIFVRGDDIQQIFAQLGVDEATHAFYLGRELMKAKLAITLGKTYRQEGAL
                     AWGYLTPPDDVKSEHVKLTARRKRTRSGEAPGRRAGAE"
BASE COUNT          356 a          766 c          777 g          307 t
ORIGIN      
        1 gctgctcggt ttccgcctcg acgagcgccg ccggctgcag cgctggtccg acgagatgat
       61 cgcgggcacc gccgccgaca cgcccgacga cgtggccgcg gcggccctct tcctcgcctc
      121 ggacgacgcc cgattcatga cgggacagac gatcacggtg aacggcggcg tggtttagcc
      181 gcatcacgga gcaaaggagc acacatgcct gcgaccaaag agcggaccta caacgagacc
      241 gagatcgccg agaagctcaa ggatctcccc ggctggtatt acgaggacgg ttggatccgg
      301 cgggtgtaca agaccgacgg ctggcccacg actctgatgc tggtgaacgc cgtcggctat
      361 ctggcggagg cggcctacca ccatccggac ctcaccgtca cctggggccg gatcatcgtg
      421 aagctccaga atcacgcggc cggcgggatc agcgacaagg acttcgagct ggcgcggaag
      481 atcgaggagt ccgtgctctg gcggccccag gggggcgcgc tggagggcac gccgaacaag
      541 tgggtccgat cgggggatcc gagataagga agatggaagg acggcgggac ggcggtatgg
      601 aggcacgacg gggcagccgt aaggccggcg gtctgccatg cgccgggagc ttcgtcgggt
      661 gacggccgcc gtcccgccgt cccgccatcc cgccgccccg ccctaccgcc gcgtcctctt
      721 cgtcaccggc aaactcgccg aacccgcgct gcggcgggtc ctggaggaga tgcggccgtc
      781 cttcgaggcg caggtcgcgg ttctccggat cacggtggcg gcgctcatga ccacgccctg
      841 gatcgcccgg ttcctcgaag tccctcccga caccgatctc gtgctgcttc ccgggctctg
      901 cgagggcgac ctcgcggtgg tccgggagaa gttcggggtg ccggtggaga agggtcccaa
      961 ggatctccgg gagatacccg gctacttcgg ccaggccgcc gccgcggccg actacggggg
     1021 ctaccggatc gagatcctcg ccgagatcaa caacgccccc cgcctctccc gccgcgacat
     1081 cctcgcggcg gcggagtact tccgcgccag cggggcggac ctgatcgaca tcgggtgcac
     1141 gcccggtctc gcctttcccg agctgggcga ggtcgtccgc gacctccgag cggctggcct
     1201 gcgggtcagc atcgacagct tcgaccccgc ggagatccgc gccgcggtcg ccgccggcgc
     1261 cgagatggtg ctgagcctca accgctccaa tctcgacgtc gggcgtgcgc tccggggcac
     1321 cggcgcgagc gcggtgctga tccccgacct cggcgagggg atcgacacgc tgggccccag
     1381 catcgaggcg ctggagggct ggggggtgcc atacctgctg gatccgatcg tggagccgat
     1441 cggcttcggc ttcatggcct cgctggagcg gtacgcggag gtacggcggc gctaccccga
     1501 cgccggacag atgatgggca tcgggaacat caccgagctc accagcgcgg acagcaccgg
     1561 cgtgaacgcg ctcctgatcg cgatctgcga ggagctggga gtgcgcgccg tgctcaccac
     1621 cgaggtgatc ccctgggcgc ggggagccgt ccgggagatc gatgtcgccc ggcggctgat
     1681 gcaccacgcg atcagtcacc gcacgatccc gaaaggcgtg gacgaccggc tcctcacggt
     1741 gaaggacccc gtcgttctgg aatacgacga ggccgagctg cgccggctgc accaggcggt
     1801 caccgatccc aacttccgga tcttcgccga ccggaccacg atcaccgtct tcaacgactc
     1861 gatcttcgtc cggggcgacg acatccagca gatcttcgcc cagctcggcg tggatgaggc
     1921 gacccacgcc ttctatctcg ggcgcgagct gatgaaggcc aagctcgcca tcacgctggg
     1981 gaagacctac cgccaggagg gcgcgctggc ctggggctat ctcacgccgc cggacgacgt
     2041 caagtcggaa cacgtgaagc tgaccgcacg gcgcaagcgg acccggagcg gcgaggcccc
     2101 gggccggcgc gccggcgcgg aatgagcggc gctccgccgc tggtggagcc gctcagcggg
     2161 gtggggaacc ccgccgaggt cgcggcgcga ttcctcgacc tgccct
//
LOCUS       DASUYN010000639         8268 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_201724, whole genome shotgun sequence.
ACCESSION   DASUYN010000639 DASUYN010000000
VERSION     DASUYN010000639.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8268)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8268)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8268
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201724"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(70..765)
                     /gene="phoU"
                     /locus_tag="VF061_12445"
     CDS             complement(70..765)
                     /gene="phoU"
                     /locus_tag="VF061_12445"
                     /inference="COORDINATES: protein motif:HMM:TIGR02135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0051049 - regulation of transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HEX6670367.1"
                     /translation="MSIDAHRHFHDELSHVKVRLLTMSGEAEAALGLAVEALLERDSE
                     KARRVIKGDRVIDSMEVEIEEQCINLLALQQPMARDLRMLTSALKIANDLERVGDHAV
                     NIAQSAERLNQSRPIAPEPEIVEMARLAREMLSDALEAFIRGDAAAGREVCLRDDKVD
                     ALHKSVFRILLTHMMEDPHMIGAGMELFLVSRNLERVADLATNVGEDVVFLVEGKSIK
                     HHAEDRGEARQPA"
     gene            complement(762..1610)
                     /gene="pstB"
                     /locus_tag="VF061_12450"
     CDS             complement(762..1610)
                     /gene="pstB"
                     /locus_tag="VF061_12450"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HEX6670368.1"
                     /translation="MSVTVKPRISFVTTPRATLTPRQPPAAGAERGAPAVDVRGFSFW
                     YGERHVLRSLEFGIERKAVTAIIGPSGCGKSTFLRSINRLNDLIAGTKHQGDILVEGR
                     SVYAPGTDLVALRQRVGMVFQRPNPFPKSVFDNVAYGPALNRLVPRRDLPDLVERCLR
                     RAALWDEVKDRLEEQATGLSGGQQQRLCIARALGNQPELLLMDEPCSALDPVATQRVE
                     ELIFELKKDYTIVIVTHNMQQAARVSDYTGFFDRGELIEFGETERIFTSPAHERTEAY
                     ITGRFG"
     gene            complement(1607..2422)
                     /gene="pstB"
                     /locus_tag="VF061_12455"
     CDS             complement(1607..2422)
                     /gene="pstB"
                     /locus_tag="VF061_12455"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HEX6670369.1"
                     /translation="MADTALRAPAPPRPAAPPEPAVRIETDKLTAMYGQFTAVKSVSL
                     RFPGNRVHALIGPSGCGKSTFLRTLNRMHELVEGGWITGRVLLDGEDIYAPRVNAMQL
                     RRRIGMVFQRPTPFPTMSIYDNVAAGLRVHGRIPRAELDAVVERSLRQAALWDEVKDR
                     LRASAMALSGGQQQRLCIARTVAPSPDVVLLDEPTASLDPQGTQRIEELLFELKRTFT
                     IVIVTHNMQQAARVSDTTTFFYLGTMVETGPTRQIFTAPRNEQTEAYITGRFG"
     gene            complement(2415..3233)
                     /gene="pstA"
                     /locus_tag="VF061_12460"
     CDS             complement(2415..3233)
                     /gene="pstA"
                     /locus_tag="VF061_12460"
                     /inference="COORDINATES: protein motif:HMM:TIGR00974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HEX6670370.1"
                     /translation="MSNAMVGLMVLAVVVALLPLFFILLDLVVQGAGSLSVAFFTKMP
                     APAGEIGGGVAHAIVGTLIIVGAASLIGLPVGIAAGIYCAEYPGSRLTWVARFVADVM
                     NGTPSIVVGVFAWAWIVATQKHFSALAGSAALAMLMIPMVLRTTEEMIKLVPNSLREA
                     ALALGYPRWRTSLSVVVRTTLPGIVTGSLLAVARIAGETAPLLFTALGSQYMSFDLDQ
                     PMAALPLTVFTYATGPFEEWHRYAWAAALVLILVVFVLSLGARLAIGRRFTLNG"
     gene            complement(3257..4249)
                     /gene="pstC"
                     /locus_tag="VF061_12465"
     CDS             complement(3257..4249)
                     /gene="pstC"
                     /locus_tag="VF061_12465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HEX6670371.1"
                     /translation="MTTTLAGAPSAPPAPEAPPSLELANYGDRVFRGLLTLGALSIPF
                     LLGFLVLELWMGSRLAIAKFGLSFVTTSTWDPVAEQFGAYPLIFGTLASSVLALVIAV
                     PLSLGVAIYLSEFAPKAVRQPVAFLIGLLAAIPSVVYGLWGIFVLIPILRANVFPFLR
                     DTLGFVPLFQGPIYGPSMLAAGIILAIMVMPYIMSVSREVLLAVPDSQREAALALGAT
                     RWEAVITAVVPYARSGIIGAVILGLGRALGETMAVTMLIGNRHEIAASLFAPGYTMAA
                     AIANEFSEAVGDMHLSALAYVAFLLFIVTVVVNAGARLLIWRVARGSGAGSKAL"
     gene            complement(4350..5411)
                     /gene="pstS"
                     /locus_tag="VF061_12470"
     CDS             complement(4350..5411)
                     /gene="pstS"
                     /locus_tag="VF061_12470"
                     /inference="COORDINATES: protein motif:HMM:NF008171.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0042301 - phosphate ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HEX6670372.1"
                     /translation="MSIRSLRLVAAGLLVLGCGGERPSAGAGADSSPAGATRGASLTG
                     AGATFPNPIYTKWFDTYAKATGVRINYQSIGSGGGIRQFTEGTVDFGATDGPMTDDQI
                     KAVQGNVLHIPTVLGAVVLTYNLPSVGGTKLRLDAPTIADIFLGRLTKWNDPRLMQLN
                     PGVKLPDSDIIVVHRSDGSGTTYVFVDYLSKVSPEWEKKVGRATSVNWPIGLGGKGNE
                     GVTQQVKQTEGAIGYVELIYAVSNDLAYAIVKNAAGNFVEPTLQTATAAASGVDLPPD
                     TDFRVSITNAPGPNAYPITSFTWLLIRKEAQDAAKAKTIWDFVGWMTDAEAQRMAADL
                     HYAPLPMPVIELVKKRLPA"
     gene            complement(5435..6613)
                     /locus_tag="VF061_12475"
     CDS             complement(5435..6613)
                     /locus_tag="VF061_12475"
                     /inference="COORDINATES: protein motif:HMM:NF019042.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HEX6670373.1"
                     /translation="MPAIARSPLSAVLVLSLIGLEVQAQTTYPSIEVTGRLQEQFYYF
                     DNDSYAPEVGPQSTFFIRRARVEARGDIAENVAVYIQPSFEGGRPLSATTTCTSSPVP
                     PGGGTPTVTCRTTGRSGLRLRDAYVDVRLTAGARATTVYLRGGQEKRPFSRYELISST
                     NLPSIERGAGQGLPGRASNNLFEAAGFLSHDVGASLRLEHDLDDDRQLTLKLGVYNGQ
                     GESLNDVNDRKSFGARGTVTVAPKLDVGAAWFSHDGIVTVEDVADSSATNQGFDLDAQ
                     YGKPGDGGLFALVEYLQGRDATPTKARMRGFQALAAYNLQAAGLPSWLTGVEPSVRLD
                     LADPDTDAEDDRVTTLTAGVGLYFTGRAWFRIAYERQSLQEPDAESVSGIRSMLAVSF
                     "
     gene            6849..>8268
                     /locus_tag="VF061_12480"
     CDS             6849..>8268
                     /locus_tag="VF061_12480"
                     /inference="COORDINATES: protein motif:HMM:NF025092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HEX6670374.1"
                     /translation="MTTRLLVRFALSLCLTVGGTGAVSAQDTGRIVGRVVEGQQGAPV
                     AGATVELIGADRSVVTALDGRYTLEDVPAGPASVRVRMIGFGPKVVTGIQVPAGAAVA
                     QDIALEAEVVQLAEISVSAAAERGTVNRALEEQRNAANIVSAVSSEQIARSPDGDAGQ
                     AVQRVSGVTVQDGRYVIVRGLGERYTTTSLNGARIPSPEPDRKVVPLDLFPSSLLEGI
                     TTSKTFTPDQPGDFSGAQVDLKTREFPTGRVVTLSTSVGLNTAVTGRTLPRAPRTGTE
                     WLGFGGSERELPGPAREAGTLAGLSQADRIPIINSFRDVWSSRAADAGPNGSLGLSLG
                     GEDPILGQRIGYIGSFSYSYGQETRRDESRASAFPGPTPDQATPVNRYTGSTGRESVL
                     WGGLLNLSTRIGTSTKLSFNNSLTRTADNEATQLAGFYEQNAINLALTRLTFVERSVR
                     SNQLQGEHLLGERHFLDWSASAT"
BASE COUNT         1273 a         2866 c         2905 g         1224 t
ORIGIN      
        1 cgacgtcgat ggcggcgatg cgctcccggg tgaggggggt gggggcgggg gcgggcaagg
       61 aacgcgccgt cacgccggct gccgcgcctc cccccgatcc tcggcgtggt gcttgatgga
      121 cttcccctcg accaggaaca cgacgtcctc ccccacgttg gtggcgaggt cggccacccg
      181 ctccaggttg cggctcacca ggaagagctc catcccggcc ccgatcatgt gcgggtcttc
      241 catcatgtgg gtgagcagga tgcggaacac cgatttgtgc agcgcgtcca ccttgtcgtc
      301 ccggaggcag acctcgcggc cggcggcggc atcgccccgg atgaaggcct cgagcgcgtc
      361 ggacaacatc tcccgggcga gccgggccat ctccacgatc tcgggctcgg gcgcgatcgg
      421 ccggctctgg ttgagccgct cggcgctctg ggcgatgttg accgcgtggt cgcccacccg
      481 ctcgaggtcg ttggcgatct tgagggccga ggtgagcatc cggaggtcgc gcgccatcgg
      541 ctgctggagg gcgaggaggt tgatgcactg ctcctcgatc tccacttcca tgctgtcgat
      601 gacccggtcg cccttgatga cccggcgcgc cttctcgctg tcccgctcca gcagcgcctc
      661 gaccgcgagg cccagcgccg cctcggcctc gccggacatc gtgagcaggc gcaccttgac
      721 gtgactcagc tcgtcgtgga agtgacgatg ggcgtcgata ctcatccgaa ccttccggtg
      781 atgtaggcct cggtccgctc gtgcgccggg ctggtgaaga tccgctcggt ctcgccgaac
      841 tcgatcagct cgccccggtc gaagaatccg gtatagtccg acacccgcgc ggcctgctgc
      901 atgttatgcg tgacgatcac gatggtatag tccttcttga gctcgaagat cagctcctcc
      961 acccgctggg tggccaccgg gtcgagggcg gagcacggct cgtccatgag gaggagctcg
     1021 ggctggttgc ccagcgcccg cgcgatgcag agccgctgct gctggccgcc cgacagtccg
     1081 gtcgcctgct cctccagccg gtccttcacc tcgtcccaca acgccgcccg ccggaggcag
     1141 cgctccacca ggtcggggag gtcgcgccgg ggcaccaggc ggttcagcgc cggaccgtag
     1201 gccacgttgt cgaacaccga cttggggaac gggttcgggc gctggaagac catgccgacc
     1261 cgttggcgca gcgccaccag gtcggtgccg ggggcgtaca ccgagcggcc ctccaccagg
     1321 atgtctccct ggtgcttggt ccctgcgatc aggtcgttga gccggttgat cgagcgcagg
     1381 aaagtggatt tgccacaccc cgacgggccg atgatcgcgg tgacggcctt gcgctcgatg
     1441 ccgaactcga ggctccggag cacgtggcgc tccccgtacc agaaggagaa gccccgcacg
     1501 tcgaccgcgg gcgcaccgcg ctcggccccg gcggccggcg gctgccgcgg ggtcagcgtg
     1561 gccctgggcg tcgtcacgaa ggagatcctc ggcttcacgg tcacgctcat ccgaacctcc
     1621 ccgtaatgta ggcctcggtc tgctcgttgc ggggcgcggt gaagatctgc ctggtggggc
     1681 cggtctcgac catggttccc agatagaaga atgtcgtggt gtcggacacc cgcgccgcct
     1741 gctgcatgtt gtgggtgacg atgacgatcg tgaacgtccg cttgagctcg aacagcagct
     1801 cctcgatccg ctgggtcccc tgggggtcga gcgaggcggt cggctcgtcg agcaggacga
     1861 cgtcgggcga gggggccacg gtgcgggcga tgcagagccg ctgctgctgc ccgcccgaca
     1921 gcgccatcgc gctggcccga agccggtcct tcacctcgtc ccacagcgcc gcctgccgga
     1981 gggaccgctc cacgacggcg tccagctccg cccgggggat ccgcccgtgc acccggagcc
     2041 ccgccgccac gttgtcgtag atggacatcg tggggaacgg ggtcgggcgc tggaacacca
     2101 tgccgatccg gcggcggagc tgcatcgcgt tcacccgcgg cgcgtagatg tcctccccgt
     2161 cgagcagcac ccgtcccgtg atccagccgc cctccaccag ctcgtgcatc cggttgagcg
     2221 tgcggaggaa ggtggacttg ccgcagcccg acggcccgat gagggcgtgc acgcggtttc
     2281 ccggaaagcg gagcgacacg ctcttcaccg cggtgaactg gccgtacatc gcggtgagct
     2341 tgtcggtctc gatccggacc gccggctcgg ggggcgccgc ggggcgcggc ggcgcggggg
     2401 cgcgcagggc ggtgtcagcc attgagcgtg aacctccgac cgatggcgag cctggcgccg
     2461 aggctgagca cgaagaccac gaggatcagg accagcgccg cggcccaggc gtagcggtgc
     2521 cactcctcga agggtccggt ggcgtaggtg aagaccgtca gcggcagcgc cgccatcggc
     2581 tggtcgagat cgaagctcat gtactggctg cccagcgcgg tgaagagcag gggcgccgtc
     2641 tctccggcga tccgggccac ggcgagcaga ctgccggtca cgatcccggg cagggtggtc
     2701 cgcaccacca cgctgaggct ggtccgccag cgcggatagc ccagggccag cgcggcctcg
     2761 cggagcgagt tgggcaccag cttgatcatc tcttccgtgg tccgcagcac catcgggatc
     2821 atcagcatgg cgagcgcggc gctgccggcc agggcggaga agtgcttctg ggtcgccacg
     2881 atccacgccc aggcgaacac cccgaccacg atggacggag tgccgttcat cacgtcggcg
     2941 acgaagcggg cgacccaggt gagccggctc ccgggatatt cggcgcagta gatcccggcc
     3001 gcgatgccca ccggcaggcc gatcaggctc gcggcgccca cgatgatgag ggtgcccacg
     3061 atcgcatgcg ccaccccacc gccgatctcg ccggccgggg cgggcatctt ggtgaagaac
     3121 gccaccgaga ggctgcccgc gccctgcacc accagatcga ggaggatgaa gaagagcggc
     3181 agcagggcga ccacgacggc cagtaccatg aggccgacca tcgcgttgct catcgcacga
     3241 cgcagcgtcc gccggttcac agggccttgc tccccgcgcc ggagccgcgc gccacccgcc
     3301 agatgagcag ccgcgcgccc gcgttgacca cgaccgtcac gatgaagagc aggaaggcga
     3361 cgtacgcgag ggccgagagg tgcatgtcgc ccaccgcctc ggagaactcg ttcgcgatcg
     3421 cggcggccat ggtgtagccg ggagcgaaga gcgaggccgc gatctcgtgg cggttcccga
     3481 tcagcatcgt caccgccatg gtctcgccca gtgcccggcc gaggccgagg atgacggcgc
     3541 cgatgatccc ggaccgggcg tacggcacca ccgcggtgat caccgcctcc caccgggtgg
     3601 cgcccagggc cagcgccgcc tcccgctggc tgtccggcac ggccagcagg acctcgcggg
     3661 agaccgacat gatgtagggc atcaccatga tggcgaggat gatcccggcc gcgagcatcg
     3721 agggcccgta gatcgggccc tggaacagcg gcacaaagcc cagcgtgtcg cgcaggaagg
     3781 ggaacacatt ggcgcggagg atcgggatca ggacgaagat gccccagagt ccgtagacca
     3841 cgctggggat ggcggcgagc agtccgatca ggaacgccac cggctggcgg acggccttgg
     3901 gggcgaactc gctcaggtag atggcgacgc cgagggagag ggggaccgcg atcaccaggg
     3961 ccagcaccga cgaggccagg gttccgaaga tcaggggata cgcgccgaac tgctcggcga
     4021 ccggatccca ggtgctggtg gtgacgaagc tcagcccgaa cttcgcgatc gcgagccggg
     4081 accccatcca cagctcaagg acgaggaagc cgaggaggaa ggggatcgag agcgcaccga
     4141 gggtgaggag gccccggaag acccggtcac cgtaattggc gagctcgagg gaggggggcg
     4201 cctccggtgc cggcggcgcc gacggcgctc cggcgagcgt agtggtcatg ggggtgatgt
     4261 tacccgcgcc cgctgagtgg aaggtcacgg gtatgtaacg gacatgtcac ggggggcggg
     4321 gctaccagcg cccggccccc tgaagaccct caggcgggga ggcgcttctt caccagctcg
     4381 atgaccggca tcggcagcgg cgcgtagtgc aggtcggcgg ccatgcgctg ggcctccgcg
     4441 tcggtcatcc agccgacgaa gtcccagatc gtcttggcct tggccgcatc ctgagcctcc
     4501 ttgcggatca gcagccaggt gaacgaggtg atcgggtagg cgttgggccc cggcgcgttg
     4561 gtgatcgata cccgaaaatc ggtatcgggg ggaagatcga cgccgctcgc ggcggcggtg
     4621 gccgtctgca gggtcggctc gacgaagttc ccggcggcgt tcttcacgat cgcgtaggcg
     4681 aggtcgttgg agacggcgta gatcagctcg acgtagccga tcgcgccctc ggtctgcttc
     4741 acctgttgcg tgaccccctc gttgcccttg ccgccgaggc cgatgggcca gttcaccgag
     4801 gtggcccgcc ccaccttctt ctcccactcc ggcgagacct tgctcaggta gtccacgaag
     4861 acgtacgtcg tcccggagcc gtccgaccgg tggaccacga tgatgtcgct gtccggcagc
     4921 ttcaccccgg ggttcagctg catcagccgc ggatcgttcc acttggtcag gcgtcccagg
     4981 aagatgtcgg caatggtggg ggcgtccagc cgcagcttgg tgccgcccac gctcggcaga
     5041 ttgtacgtca ggacgactgc gccgagcacc gtgggaatgt ggagcacgtt gccctggacc
     5101 gccttgatct gatcgtccgt catcggtcca tcggtcgcgc cgaagtccac ggtgccctcc
     5161 gtgaactggc ggataccgcc gcccgacccg atggactggt agttgatccg cacgcccgtc
     5221 gccttggcgt aggtgtcgaa ccacttggtg tagatgggat tcgggaaggt ggcgccggcg
     5281 cccgtcaggc tcgcgcccct ggtggcaccg gccggggagc tatccgcccc ggctccggcg
     5341 gaaggccgct caccgccaca gcccaggacc agcagtccgg cggcgaccag gcgaaggcta
     5401 cggatcgaca tgcacgctcc tctcctcagg atgttcagaa gctcaccgcg agcatgctgc
     5461 ggatgccgct gacgctctcg gcgtccggct cctgcaggct ctggcgctcg taggcgatcc
     5521 gaaaccaggc ccggccggtg aagtacagcc cgacccccgc ggtcaaggtg gtgacgcgat
     5581 cgtcttcggc gtccgtgtcg ggatcggcga ggtcgagacg gaccgagggc tcgacgccgg
     5641 tcagccacga cggcaggccc gccgcctgaa ggttgtaggc ggccagcgcc tgaaatccgc
     5701 gcatgcgcgc cttcgtcggc gtcgcgtccc gcccctgcag gtactccacc agggcgaaca
     5761 gcccgccgtc gccgggcttc ccgtactggg cgtcgaggtc gaagccctgg ttcgtggcgg
     5821 acgagtcggc gacgtcctcg accgtgacga tgccgtcgtg ggagaaccac gccgccccta
     5881 cgtcgagctt cggcgcgacc gtgaccgtgc cccgcgcgcc gaagctcttc cggtcgttca
     5941 cgtcgttgag gctttcaccc tgcccgttgt acaccccgag cttgagcgtc agctggcggt
     6001 cgtcatccag atcgtgctcc agcctgaggc tcgcccccac atcgtgactg aggaatccgg
     6061 cagcctcgaa gagattgttc gacgcccgcc ccggcagacc ctgccccgcc ccccgctcga
     6121 tggagggcag gttggtggac gagatcagct cgtaccggct gaaggggcgc ttctcctgac
     6181 cgccgcgcag atacacggtc gtcgcgcggg ctcccgcggt cagccgcacg tccacgtagg
     6241 cgtcgcgcag ccgcagcccg ctccgacccg tcgtccggca ggtcaccgtg ggtgtgccgc
     6301 cgcccggcgg caccggggac gaggtgcagg tcgtggtcgc cgacagcggg cgcccgccct
     6361 cgaaggacgg ctggatgtac accgccacgt tctccgcgat gtcgccgcga gcctccaccc
     6421 gcgcccggcg gatgaagaac gtgctctgcg gacccacctc gggcgcatac gagtcgttgt
     6481 cgaaatagta gaactgctcc tgcaaccgtc ccgtcacctc gatgctcgga tacgtcgtct
     6541 gcgcctggac ttccagcccg atcaggctca ggaccagcac ggcgctcagc ggactgcgtg
     6601 cgatcgcggg catacgaccc ctggtggagg ttgcgcggac cgtgactgcg gctgggaagg
     6661 gagccgccac cggtcacgaa actcgcgccc aatggtaacg aagcggtaaa gacggcggac
     6721 agtcgcggcc gtgacgcgtt cgttgcggtg ccgtgcccgg ggcgtcacgg cgagggtgga
     6781 gcttcgtcgc tgtccggccg accggtcggc gatcgacccg tgccttctcc cttccacctc
     6841 ctgcggcgat gaccacacga ctgctcgttc gcttcgcgct ttctctctgt ctgactgtcg
     6901 gcggaaccgg cgcggtctcg gcccaggaca ccggccggat cgtgggccgg gtcgtcgaag
     6961 gccagcaggg cgccccggtg gccggggcca cggtcgagct gatcggcgcc gaccggagcg
     7021 tggtgaccgc gctggacggc cgttacaccc tggaggacgt gccggcggga cccgcctcgg
     7081 tgcgggtccg gatgatcggc ttcgggccca aggtcgtgac cggcatccag gtgccggcgg
     7141 gtgccgccgt cgcccaggac atcgcgctcg aggccgaggt ggtgcagctg gccgagatct
     7201 cggtgagcgc ggccgcggag cggggcaccg tcaaccgggc gctggaggaa cagcgcaacg
     7261 cggcgaacat cgtctcggcc gtgtcctcgg agcagatcgc gcgcagtccg gacggcgatg
     7321 cggggcaggc ggtccagcgg gtcagcggtg tcaccgtgca ggacggccgg tacgtgatcg
     7381 tccgcgggct gggcgagcgg tacaccacca cctccctcaa cggtgccagg atcccgagcc
     7441 ccgagcccga ccggaaggtg gtgccgctgg acctgttccc ctccagtctg ctggaaggca
     7501 tcaccacctc caagacgttc acgcccgacc agcccggcga cttcagcggg gcgcaggtgg
     7561 acctcaagac ccgtgagttc cccaccggcc gcgtggtcac cctctcgacg tcggtcgggc
     7621 tcaacacggc ggtcaccggg cggacgctgc cccgcgcgcc ccggaccggc acggaatggc
     7681 tcggcttcgg cggcagcgag cgcgagctgc ccggccccgc ccgcgaggcc ggcaccctcg
     7741 ccgggctcag ccaggccgac cgcatcccga tcatcaactc gttcagggac gtctggagca
     7801 gccgggcggc cgacgccggt ccgaacggca gcctggggct ctcgcttgga ggggaggacc
     7861 cgattcttgg ccagcggatc ggctacatcg ggtccttcag ctactcctac ggccaggaga
     7921 cccggcgcga cgagtcgcgg gccagcgcgt tcccgggccc gacgccggac caggccaccc
     7981 cggtcaaccg gtacaccggc tcgaccggcc gggaatcggt gctctggggc ggcctgctga
     8041 acctgagcac ccgtatcggc acctcgacca agctctcgtt caacaactcc ttgacccgca
     8101 ccgccgacaa cgaggccacc cagctcgccg gcttctacga gcagaacgcc atcaacctcg
     8161 cgctgacccg gctgaccttc gtggagcgga gcgtccggtc gaatcagctc caaggtgagc
     8221 acctgctggg cgaacggcac ttcctcgact ggtcggccag cgcgaccg
//
LOCUS       DASUYN010000640         3266 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_861859, whole genome shotgun sequence.
ACCESSION   DASUYN010000640 DASUYN010000000
VERSION     DASUYN010000640.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3266)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3266)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3266
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_861859"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..352
                     /locus_tag="VF061_12485"
     CDS             <1..352
                     /locus_tag="VF061_12485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="SufD family Fe-S cluster assembly protein"
                     /protein_id="HEX6670375.1"
                     /translation="GQGQNSYRGLVKVLPKASGARNYTQCDSMLIGNRCGAHTFPYID
                     VQNASSSTEHEASTSKIGEDQIFYLKQRGLNTENAISMIVNGFCKEVFQELPMEFAVE
                     AQKLLGISLEGSVG"
     gene            452..1222
                     /gene="sufC"
                     /locus_tag="VF061_12490"
     CDS             452..1222
                     /gene="sufC"
                     /locus_tag="VF061_12490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly ATPase SufC"
                     /protein_id="HEX6670376.1"
                     /translation="MLEIRDLRASAGDKEILKGINLTVNRGEVHAVMGPNGSGKSTLA
                     QVLAGHPAYEVTSGSVRYEGQDLLDMEPEARAQAGVFLAFQYPVEIPGVSNAYFLRAA
                     YNEIRKARGEEEIDSLDFIDLLEDRLKVVEWGPEIMSRAVNSGFSGGEKKRNEILQLA
                     VLEPKLAILDETDSGLDIDALRIVAAGVNKLRSPDRSFIVVTHYQRLLNYIVPDFVHV
                     LSNGRIAMSGGKELALELEAKGYEWVEAAATAGSGAGS"
     gene            1219..2550
                     /gene="sufD"
                     /locus_tag="VF061_12495"
     CDS             1219..2550
                     /gene="sufD"
                     /locus_tag="VF061_12495"
                     /inference="COORDINATES: protein motif:HMM:TIGR01981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufD"
                     /protein_id="HEX6670377.1"
                     /translation="MSEAVLQDLELGAGGAIADGPEWLEPLRRAAATRFAAAGFPGAR
                     DEEWRFTPVAPIAQRTWRPAPAEAAELPAERLAPFIFGHPEWSTLVFVDGAYSEALSR
                     VSVPPAGVKVGSLAEALRGNGSLLPAHLTRHAPIEGSAFTALNTAGFRDGGLVYVPAG
                     LDLERPVHFVYVATAAAEGTAIHPRNLIVVERGARASVIESYVTLASEGVYWTNPVTE
                     VSAAEGSWLEHTRIQRESERAYHVGLTQVDQRRDSHYRSFSMAMGGALARHTLHVRLN
                     DENIETLMYGLYITRGEQVVDNHTAIFHDQPNCRSWEVYKGVLDGRSRAVFNGKVFVR
                     PEAQKTDAKQTNRNLLLSDGAKVDTKPQLEIFADDVRCTHGATVGRLDDVALFYARSR
                     GVPHDAAERLLTYAFAAEVIDEVALEPVRLELDRLVLERLEGQRTGPEGQG"
     gene            2561..>3266
                     /locus_tag="VF061_12500"
     CDS             2561..>3266
                     /locus_tag="VF061_12500"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEX6670378.1"
                     /translation="MAQPRTVPPASVARPAGVLDVGRIREDFPILSQITRSGHPLVYL
                     DNAATSQKPRPVIDAIAEFYRCGNANIHRGLYELSERASAAVDEARNRVARFLGAPSA
                     AEIVFTRGTTEAINLVAQSWGRSTLRSGDEVLVTGMEHHSNLVPWQLVCQQTGARLRA
                     VPITDRGELDLEAFDRLLGDSTRLLAVGHVSNALGTVNPVRELTARAHAKGALVLVDG
                     AQSAPHLPIDVGELGCD"
BASE COUNT          536 a         1101 c         1166 g          463 t
ORIGIN      
        1 ggggcagggg cagaacagct accgcgggct ggtgaaggtg ctgcccaagg ccagcggcgc
       61 gcggaactac acccagtgcg actcgatgct gatcgggaac cgctgcggag cgcacacctt
      121 cccgtacatc gacgtgcaga acgcctccag ctccaccgag cacgaggcgt ccacctcgaa
      181 gatcggagag gaccagatct tctacctgaa gcagcgcggc ctcaacaccg agaacgcgat
      241 ctcgatgatc gtgaacggct tctgcaagga ggtcttccag gagctgccga tggagttcgc
      301 ggtcgaggcg cagaagctgc tcgggatcag tctcgagggg agcgtaggct aggcggatgt
      361 cagcctgagc ggagcgaagg cgaccatgcg ggcatgggcc ccttcgctcc gctcaggtga
      421 cacgaattgc gatcacgttc ggaggacaga cgtgctggaa atcagggatc tgcgggcttc
      481 ggccggcgat aaggaaattc tcaagggcat caacctcacc gtgaatcgcg gcgaggtgca
      541 cgccgtgatg ggccccaacg gctcggggaa gagcacgctg gcccaggtgc tggccggaca
      601 cccggcctac gaagtcacca gcggctcggt gcgctacgag ggacaggacc tgctggacat
      661 ggagcccgag gcccgggccc aggccggcgt gttcctggcc ttccagtatc cggtcgagat
      721 ccccggcgtc agcaacgcct acttcctgcg tgcggcctac aacgagatcc ggaaggcgcg
      781 gggcgaggag gagatcgact cgctcgactt catcgacctg ctcgaggaca ggctcaaggt
      841 cgtggagtgg gggccggaga tcatgagccg ggcggtcaat tccggcttct ccggcggtga
      901 gaagaagcgg aacgagatcc tccagctcgc cgtgctggag ccgaagctgg cgatcctcga
      961 cgaaaccgat tcgggactcg acatcgacgc gctgcgaatc gtcgccgccg gggtgaacaa
     1021 gctgcggagc ccggatcggt cgttcatcgt ggtgacccac taccagcggt tgctcaacta
     1081 catcgttccc gacttcgtgc acgtgctctc gaacgggcgc atcgcgatgt ccggcgggaa
     1141 ggagctggcg ctcgagctcg aggccaaggg ctacgagtgg gtggaggcgg cggccaccgc
     1201 cgggtcggga gcggggtcgt gagcgaggcc gtcctgcagg atctcgagct cggggccggc
     1261 ggggccatcg ccgacgggcc ggagtggctg gagccgcttc gccgggccgc cgccacgcga
     1321 ttcgccgcgg ccggcttccc cggcgcgcgc gacgaagaat ggcgcttcac ccccgtggcc
     1381 ccgatcgccc agcgcacctg gcgtcccgcg cccgccgagg ccgccgagct gccggccgag
     1441 cggctcgcgc ccttcatctt cgggcacccg gagtggagca cgctggtctt cgtggacggc
     1501 gcctacagcg aggcgctttc ccgcgtcagt gtcccgcctg ccggcgtgaa ggtcgggagc
     1561 ctggccgagg cgctgcgcgg caacggcagc ctgctgcccg cgcatctgac gcggcacgcc
     1621 ccgatcgagg gcagcgcctt caccgcactc aatactgcgg ggttccgcga cggcgggctg
     1681 gtgtacgttc cggccgggct cgatctcgag cggccggtgc acttcgttta cgtggccacg
     1741 gccgccgccg aggggaccgc gatccacccc cgcaacctga tcgtggtgga gcggggggcg
     1801 cgcgcgtcgg tcatcgagag ctacgtgacg ctggcgtccg agggtgtgta ctggaccaac
     1861 ccggtcaccg aggtctcggc ggccgaaggg tcgtggctgg agcacacccg gatccagcgg
     1921 gagagcgagc gcgcctacca cgtgggcctg acccaggtgg accagcggcg ggacagccac
     1981 taccggtcgt tctccatggc catgggcggc gcgctggccc ggcacactct ccacgtccgg
     2041 ctgaacgacg agaacatcga gaccctcatg tacggtctct acatcacccg cggcgagcag
     2101 gtggtggaca accacacggc gatcttccac gaccagccca actgccggag ctgggaggtc
     2161 tacaagggcg tgctcgacgg gcgctcgcgc gccgtcttca acggcaaggt gttcgtccgc
     2221 cccgaggcgc agaagaccga cgccaagcag accaaccgga acctgctgtt gagcgacggg
     2281 gccaaggtgg acaccaagcc ccagctggag atcttcgccg acgacgtgag gtgcacccac
     2341 ggtgccaccg tgggccgcct ggacgacgtg gccctgttct acgcgcggag ccggggcgtg
     2401 ccccacgatg cggcggagcg gcttctcacc tacgcgttcg cggcggaggt gatcgacgag
     2461 gtcgcgctgg agccggtgcg actggagctg gaccgactgg tgctggagcg gctcgaggga
     2521 cagcggaccg ggcccgaagg gcagggctga cggagcggcg atggcccagc cacgcaccgt
     2581 tccccccgcc tctgtggctc gccccgccgg cgtgctggac gtcggccgca tccgcgaaga
     2641 ctttcctatc ctctcgcaga tcacccggag cggccacccg ctcgtctacc tcgacaacgc
     2701 cgccaccagc cagaagccga gaccggtgat cgacgcgatc gccgagttct accgctgcgg
     2761 gaacgccaac atccaccggg gcctctacga gctgagcgag cgggcgagcg ccgccgtcga
     2821 cgaggcccgg aatcgggtcg cgcggttcct gggcgccccc tcggcggcgg agatcgtgtt
     2881 cacccggggg acgaccgagg ccatcaatct cgtggcccag agctgggggc gaagcacgct
     2941 ccggtccggc gacgaggtgc tggtgaccgg gatggagcac cactccaacc tggtgccctg
     3001 gcagctcgtg tgtcagcaga ccggcgcccg gctccgggcg gtgccgatca ccgaccgcgg
     3061 cgagctggac ctggaggcct tcgaccgttt gctcggcgac agcacccggc tgctcgccgt
     3121 gggccacgtg tccaacgcgc tcggcacggt gaacccggtc cgcgagctga ccgctcgcgc
     3181 gcacgcgaag ggcgctctgg tgctggtgga tggagcgcag tcggcgcctc acctccccat
     3241 cgacgtcggc gagctggggt gcgatt
//
LOCUS       DASUYN010000641         4463 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1085618, whole genome shotgun sequence.
ACCESSION   DASUYN010000641 DASUYN010000000
VERSION     DASUYN010000641.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4463)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4463)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4463
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1085618"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1800
                     /locus_tag="VF061_12505"
     CDS             <1..1800
                     /locus_tag="VF061_12505"
                     /inference="COORDINATES: protein motif:HMM:NF015649.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX6670379.1"
                     /translation="SDSPEFEHWVEEERTRLAQRHAAALEALARAATAEGDPVAAAGW
                     WRRLAGAEPLNARVIVGCMEALAAAGDRPAALRFAKAYETMLRQEFESDPDPAVLAAA
                     ERLKHPVGATADAAPSAPAIAVLPFDQLSPEEEGEYFSHGLTEELTNALARVPGLRVA
                     SRTSVYALRGKGLDAREVGDRLGVGALVEGTVRKVGNRIRLSARMVSAADGCQLWSEV
                     YERTLEDVFALQDELARALVAALPLRLGRPAPSLVRRPTAVLDAYTLYLRGRYAAQKR
                     TPEALSLGIEYFEQAVERDPGYALAHAGLAECWTLRGFPEFGDLDWSVAVPKARAAAL
                     EALRLEPHLAGAHTWLGAIHFLYDWDWPAAEAEFRRALQLDPGDPMAETWYAVFLGAM
                     GRCEESLPRILHAEAIEPLSLTIRLCVGRCYIYARRFGQAYEALAGLFKSEPGHRLTA
                     IWLARALCGLDRPGEAVDLLRRLPANEQTPYVRAILAYALAAAGRSDEARAMCRDLES
                     EFARGRAGALATVGALARLGDLTAALENLQQAVRRREPFVVWLISDDRYDPLRDLPGF
                     RALVRELRLGPAGDALDEDEAPSASAGLRVIPG"
     gene            complement(1781..>4463)
                     /locus_tag="VF061_12510"
     CDS             complement(1781..>4463)
                     /locus_tag="VF061_12510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670380.1"
                     /translation="KAALGLPNESEATEAQRAAGMSWREEDELYNDGRPFKVTSRDTR
                     GVMVTLIADNYFGYCKKEVKTQIGYSANLFGLAEEEHAGGALAFPAFNLGDRFTADQV
                     RVVTAGHRLTEVLHLLGDRARRQPSGYAVDALWPTVHYMPEDMEIDIHRQAITWTKDG
                     EPRHLKLLPGRIYIHPSGYKVRMEKHHAAPSWRLVGTVPEGAFCHKPCTVSGGGKSEI
                     SKSLVDAVLPGSFYVRSFDEDMALVDEILRRRYDDVRAEGGGGRGPARPLLSPERSLG
                     SVVKLLTPNPDEFTPEYNAWLEGIPNHVRALVFVIKRFHRPEWGDEWLRYFGVDIING
                     APGHELKYEGRKLVANYLRIGRDGHGAWRTYKLRQDFVAADKVQMEDDITASVVVPAR
                     RLVGLPGEYDGHPSLKLALNCEYRLFQRPDDAVHPGLDRQAEKDMASAGLFCSNFQPL
                     AADDMRVIREDVATHDGFTPPMREHVDRNAARTEPGWSVCSARPRIVGGTATKNPRYL
                     QLRPDMARPRDRYVAEMGARLSRRLPLSAPVHFPVIAVMSGRRNNPPESGIRPLCVYG
                     PIHYQELPELFMDYVCSLTGTSPSTTGAGSEGALTKGPFNALAATADLNNALVAFLLT
                     GYAGFSSAAGFVGPHYRVDHDISLLVPEIWCRLYPHERDPRHLIEAGHLERLADYEFE
                     GGTVLASRLGWRITAKFVHTYFGRVFDNPTAVFTEDILKPELQDPAVFADGVANIVEA
                     QRRVALLYFEDGTIEDCCPPLRALIHIMAHGHFEGRGADDPAIRAMFTREALLASEWY
                     AERLTVKQRRDVALWERHVGSLTEFLASPGHRGEAERLGIPRRLEHARAELDRVRSPE
                     YVRSLVGTIGADPVHRPAHARHVWPAAAEATPTPVSP"
BASE COUNT          593 a         1626 c         1576 g          668 t
ORIGIN      
        1 agcgactccc ccgagttcga gcattgggtg gaggaggaac ggacccggct ggcgcaacgg
       61 catgccgcgg cgttggaggc gctggcccgt gccgccaccg ccgaaggcga tcccgtggcg
      121 gcggcgggct ggtggcgacg gctcgccggg gcggagccgc tgaacgcccg ggtgatcgtg
      181 ggctgcatgg aggcgctcgc ggccgccggc gatcggcccg ccgcgctgcg cttcgcgaag
      241 gcctacgaga ccatgctccg ccaggagttc gagagcgacc ccgaccctgc cgtcctggcc
      301 gcggccgaac ggctcaagca tccggtcggc gccacggccg atgccgctcc gtccgcgccc
      361 gccatcgccg tgctgccgtt cgaccagctc tcgcccgagg aggagggcga gtacttcagc
      421 cacggactga ccgaggagct caccaacgcg ctggcgcggg tccccggcct gcgcgtcgcc
      481 tcccgcacct cggtctacgc gctccggggc aagggattgg acgcgcgcga ggtcggggat
      541 cggctggggg tcggtgcgct ggtggaaggg acggtgcgca aggtggggaa ccgcatccgg
      601 ctgagcgccc gaatggtcag cgccgccgac ggctgccagc tctggtccga ggtgtacgag
      661 cgcaccctgg aggacgtgtt cgcccttcag gacgaattgg ccagagcact cgtggccgcg
      721 ttgccgctcc ggctcggccg cccggcaccc tcactggttc gccgcccgac ggccgtgctg
      781 gacgcttaca ccctgtacct gcgcggtcgc tacgccgccc agaaacgaac gcccgaagcg
      841 ctgtcgctgg gcatcgagta cttcgagcaa gcggtcgagc gggatcccgg ctacgccctg
      901 gcccatgccg ggctcgccga gtgctggacc ctgcgcggct ttcccgagtt cggcgacctc
      961 gactggtcgg tggccgtgcc gaaggcacgg gcggccgcgc tcgaggcgct ccggctcgag
     1021 ccccacctgg ccggggcgca cacctggctc ggtgccatcc actttctcta cgattgggac
     1081 tggcccgccg cggaagcgga gttccgccgg gcgctccagc tggatccggg cgatccgatg
     1141 gccgaaacct ggtacgccgt gtttctcggg gccatgggcc ggtgcgagga gagtctgccc
     1201 cgcattctgc acgcggaggc catcgagccg ctctcgctca cgattcggct ctgcgtggga
     1261 cggtgttaca tctacgcccg ccgcttcggc caggcatacg aggcgctggc cgggctcttc
     1321 aagagcgagc cgggccaccg gctcacggcg atctggctgg ctcgcgccct ctgcgggctg
     1381 gaccgtccgg gcgaggcggt ggacctgctg cggcgactgc ccgcgaacga gcagacgccg
     1441 tacgtccgag ccatcctggc gtatgcgctg gcggccgccg ggcggagcga cgaggcgcgg
     1501 gccatgtgcc gggacctgga gtccgagttc gcccgggggc gtgccggggc gttggccacg
     1561 gtcggggcat tggcacgcct gggggacctc acggccgcgc tggagaacct gcagcaagcc
     1621 gtccgccgcc gggagccgtt cgtggtctgg ctgatcagcg atgatcgcta cgacccgctg
     1681 cgtgatctgc cgggttttcg cgcactggtc cgggagctcc gtttggggcc ggctggagac
     1741 gcgctcgacg aggatgaggc gccctccgcg tccgctgggc tcagggtgat accggggtag
     1801 gggtcgcctc cgccgccgcc ggccagacgt gccgggcgtg cgcgggccga tgcaccggat
     1861 cggcgccgat tgtgccgacc agcgaccgca cgtactccgg cgatcgcacc cgatccagct
     1921 cggcccgggc gtgctccagc cgccgtggaa tcccgagccg ctccgcctcg ccgcgatgcc
     1981 ccgggctcgc caggaactcc gtcaggctgc ccacgtgccg ctcccacagc gcgacgtccc
     2041 gccgctgctt caccgtcagg cgctcggcgt accactcgct cgccagcagc gcctcccggg
     2101 tgaacatcgc ccggatcgcc ggatcgtcgg cgccgcggcc ctcgaagtgc ccgtgcgcca
     2161 tgatgtggat cagcgcccgg agcgggggac agcagtcctc gatcgtcccg tcctcgaaat
     2221 agagcagcgc cacccgccgc tgcgcctcca cgatattcgc cacgccgtcc gcgaacaccg
     2281 ccgggtcctg cagctccggc ttgaggatgt cctcggtgaa caccgcggtc gggttgtcga
     2341 acacccgccc gaaataggtg tgcacgaact tcgccgtgat ccgccagccg agccggctcg
     2401 ccagcaccgt gccgccttcg aactcatagt ccgccagccg ctccaggtgg cccgcctcga
     2461 tcaggtgccg cgggtcgcgc tcgtggggat agagccggca ccagatctcc ggcaccagca
     2521 ggctgatgtc gtggtccacc cggtagtgcg gccccacgaa ccccgcggcc gagctgaagc
     2581 cggcgtagcc ggtcaggagg aacgcgacca gcgcgttgtt caggtcggcc gtcgccgcca
     2641 gcgcgttgaa cggccccttg gtgagcgcgc cctccgagcc cgcgcccgtg gtgctcggcg
     2701 aggtcccggt cagcgagcac acgtagtcca tgaacagctc gggcagctcc tggtagtgga
     2761 tcggcccgta gacgcagagc ggccggatcc cggactcggg cggattgttc cgccggcccg
     2821 acatcaccgc gatcacgggg aagtgcaccg gcgcgctgag cggcagccgc cggctcagcc
     2881 gcgcgcccat ctcggcgacg taccggtcgc gcggacgcgc catgtcgggg cggagctgga
     2941 gatagcgcgg gttcttggtc gcggtcccgc caacgatccg cggccgcgcg gagcagaccg
     3001 accagcccgg ttcggtgcgg gccgcgttcc ggtccacgtg ctcccgcatc ggcggggtga
     3061 acccgtcgtg ggtcgccacg tcctcccgga tcacccgcat gtcgtccgcc gcgagcggct
     3121 ggaagttgga gcagaacaga ccggccgagg ccatgtcctt ctccgcctgg cggtcgagcc
     3181 ccggatggac cgcgtcgtcg ggccgctgga acagccggta ctcgcagttg agcgccagct
     3241 tgaggctggg gtggccgtcg tactccccgg ggaggcccac cagccggcgc gcgggcacca
     3301 ccaccgaggc ggtgatgtcg tcctccatct gcaccttgtc ggcagcgacg aagtcctgcc
     3361 ggagcttgta ggtgcgccac gcgccgtgcc cgtcgcggcc gatccggaga tagttggcca
     3421 ccagcttccg gccctcgtac ttgagctcgt gccccggcgc cccgttgatg atgtccaccc
     3481 cgaagtaccg cagccactcg tcgccccact ccggccggtg gaagcgcttg atgacgaaca
     3541 ccagcgcccg cacgtggttg gggatgccct ccagccacgc gttgtactcg ggggtgaact
     3601 cgtccgggtt gggcgtgagc agcttcacca ccgagccgag cgagcgctcg ggcgacagca
     3661 gcggccgggc gggaccgcgc ccgccgccgc cctcggcgcg gacatcgtcg tagcgccggc
     3721 gcaggatctc gtccaccagc gccatgtcct cgtcgaagct ccgcacgtag aacgacccgg
     3781 gcagcaccgc gtccaccagg ctcttgctga tctccgactt cccgccgccg gagacggtgc
     3841 agggcttgtg gcagaacgcg ccctccggga ccgtccccac cagccgccag ctgggcgccg
     3901 cgtgatgctt ctccatccgc accttgtagc cgctggggtg gatgtagatc cggccgggca
     3961 ggagcttcag gtgccgcggc tccccgtcct tcgtccaggt gatcgcctgg cggtggatgt
     4021 cgatctccat gtcctccggc atgtagtgca ccgtcggcca gagggcgtcc accgcgtagc
     4081 cgctcggctg gcggcgcgcg cggtcgccca ggaggtggag cacctcggtg agccggtggc
     4141 cggcggtcac cacccgcacc tggtcggcgg tgaaccggtc gcccaggttg aacgcgggga
     4201 aggccagcgc cccgcccgcg tgctcctcct ccgccagtcc gaagaggttc gcgctgtacc
     4261 cgatctgggt cttcacttcc ttcttgcagt agccgaaata gttgtcggcg atgagggtga
     4321 ccatgacgcc gcgggtatcg cgcgaggtca ccttgaacgg ccgaccgtcg ttgtagagct
     4381 cgtcctcctc ccgccacgac atccccgcgg cgcgctgggc ctcggtcgcc tcgctctcgt
     4441 tcgggagacc cagcgccgcc ttc
//
LOCUS       DASUYN010000642         4230 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_644023, whole genome shotgun sequence.
ACCESSION   DASUYN010000642 DASUYN010000000
VERSION     DASUYN010000642.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4230)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4230)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4230
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_644023"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..592
                     /locus_tag="VF061_12515"
     CDS             <1..592
                     /locus_tag="VF061_12515"
                     /EC_number="2.1.3.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit beta"
                     /protein_id="HEX6670381.1"
                     /translation="LESAYKKAGTADAIYTGSARLEGVAYHLGVMNFAFMGGSMGSVV
                     GEKIARLARRSHEKKVPLVLVSTSGGARMQEGVLSLMQMAKTSAAIAQLHRDAVPYIS
                     ILTDPTTGGVSASFAMQGDVILAEPGAVIGFAGQRVIKQTIGQDLPEGFQTAEFLVEH
                     GQIDDVVPRGSLRDTTARLLRHMQGQRPLAEHAELS"
     gene            716..1948
                     /locus_tag="VF061_12520"
     CDS             716..1948
                     /locus_tag="VF061_12520"
                     /inference="COORDINATES: protein motif:HMM:TIGR01499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase family protein"
                     /protein_id="HEX6670382.1"
                     /translation="MALTYDEALDFLFPRTTTIKFGLATTRALLRSLGNPHEVVPAIH
                     VGGTNGKGSVCTLVAAALREAGWRVGLYTSPHLVSFRERIQVDGVPVSEPAVAMWTER
                     LRPLILERRATFFEATTAIAFADLAARGAEIAVVEVGLGGRLDSTNVVRPLVSAVTKI
                     ERDHMKYLGDTLEKIAAEKAGIAKPGAPFVIGERSPELVEVLRRAAHRAVARAEPGAR
                     ADVRVLPAAYEWTGPLALAGPHQRRNAGVAHGVLMALPPQWRPDRGAIERGFASAWIP
                     GRLDRRGKWLFDVAHNPDGIRSLIAALETLAPPRPIHGLISILGDKEWPEMLVQLDRV
                     IDRGILTVAPTAASRGWDAAWLRRWLNDASRPPARASWSLVPDFHAALEEARRGAGTI
                     LVTGSFHTVGDVMGELGL"
     gene            1989..3302
                     /gene="hisS"
                     /locus_tag="VF061_12525"
     CDS             1989..3302
                     /gene="hisS"
                     /locus_tag="VF061_12525"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: protein motif:HMM:TIGR00442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004821 - histidine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006427 - histidyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HEX6670383.1"
                     /translation="MQTQALPGFRDFYPADLAIRDYIFRTWRQVAARYGFEEYDGPPL
                     EPLELYTAKSGAEIVGQLYSFTDKGGREVSLRPEMTPTLARMVAARANGLKKPIRWFS
                     IPQLFRYERQQRGRLREHFQLNCDLIGEAGHLADAEIVALAVDAVRAFGLGPEDVRVR
                     LSDRRLLTALLDALGVGEKQVATVYQVFDKLRRTPEDASVRRLTEAGLAPAAVDRLLA
                     VARARNWDDLARVDPVVAGALDQGDSLRRTLDALRAMGFGDHLDLDLAIVRGLAYYTG
                     TVFELFDARGELRAICGGGRYDNLLESLGGVDLPALGFGMGDVVLGELLRERGLAPPA
                     GATVDVFLAAITQDDLAEVLGLARELRDAGLRVEYALAPQAVGKQLKLADARGARLAI
                     VVGPDDRARGEVMVKDLRGKGQESVGRGALREHVEGVVRGTALSP"
     gene            3360..>4230
                     /locus_tag="VF061_12530"
     CDS             3360..>4230
                     /locus_tag="VF061_12530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl--tRNA ligase-related protein"
                     /protein_id="HEX6670384.1"
                     /translation="MKQNGKGSETEMAEAKALTPRATDFSAWYNELIARAELADYSPV
                     RGCMVIRPNGYAIWEQMQRALDQMFKDTGHQNAYFPLFIPQSFLSREAEHVEGFAPET
                     AVVTHGGGKELEEPLVVRPTSETIIYAMYAKWIQSYRDLPLLINQWANVVRWEMRTRL
                     FLRTTEFLWQEGHTAHATEAEAEEEARRMLGVYRTFMEEWMAMPVVTGRKTDSERFAG
                     ALRTYSCEAMMQDNKALQAGTSHNLGQNFARAFDIFFSSDSGSRELAWTTSWGTSTRM
                     LGGLIMCHGDDNGL"
BASE COUNT          624 a         1426 c         1552 g          628 t
ORIGIN      
        1 gctggaatcg gcgtacaaga aggcgggcac ggccgacgcc atctacaccg ggagtgccag
       61 gctggagggc gtcgcctatc acctcggcgt catgaacttc gcgttcatgg gcggctcgat
      121 gggctcggtc gtgggggaga agatcgcccg gctcgcccga cgttcgcacg agaagaaggt
      181 gcccctggtc ctcgtctcca cttcgggcgg cgcgcggatg caggaagggg tgctctccct
      241 gatgcagatg gccaagacct ccgcggccat cgcgcagctg catcgcgacg ccgtccccta
      301 catctccatt ctcaccgatc cgaccaccgg cggcgtgtcg gcgtccttcg ccatgcaggg
      361 cgacgtgatc ctggcggagc cgggcgcggt gatcgggttc gcggggcagc gggtgatcaa
      421 gcagaccatc gggcaggacc tgcccgaggg gttccagacg gcggagttcc tggtggagca
      481 cggccagatc gacgacgtgg tcccgcgggg ctcgctccgg gacaccaccg cgcgtctcct
      541 gcggcacatg cagggccagc gaccgctcgc ggagcacgcc gagctgagct gacgcgagcg
      601 tcatggcctg ctcccggcgc cccatccgcg gtttcgctgg tggggcgccg gtgtatgtgg
      661 gggacgggtg tccgccacgg tccctcagtc gcaccgctcc ttcgggacga cacacatggc
      721 actgacctac gacgaggcgc tggacttcct ctttccccgg acgaccacga tcaagttcgg
      781 gctcgccacc acgcgcgccc tgctccggtc actgggcaat ccgcacgagg tggtgccggc
      841 catccacgtc ggcggcacca acggcaaggg gagcgtctgc accctggtgg ccgccgcgct
      901 ccgcgaggcc gggtggcggg tcgggctgta cacctcgccg cacctggtct ccttccgcga
      961 gcggatccag gtggacgggg tgccggtctc cgaaccggcg gtggcgatgt ggaccgagcg
     1021 gctgcggccg ctgatcctcg agcgtcgcgc cacgttcttc gaggccacga ccgccatcgc
     1081 gttcgccgac ctggccgcgc gcggggcgga gatcgccgtg gtcgaagtgg ggctgggcgg
     1141 tcggctggac agcaccaacg tggtgcgccc cctggtgagc gcggtgacca agatcgagcg
     1201 cgaccacatg aagtacctgg gggacacgct ggagaagatc gcggcggaga aggcgggaat
     1261 cgccaagccg ggggccccgt tcgtcatcgg agagcgctcg cccgagctgg tggaggtgct
     1321 gcgccgcgcc gcgcaccggg ctgtcgcgcg cgccgagccc ggagcccggg cggacgtgcg
     1381 ggtgctcccg gcggcctacg aatggaccgg cccgctcgcg ctcgcgggcc ctcaccagcg
     1441 acggaatgcc ggggtggcgc acggggtcct gatggcgctg ccgccgcagt ggcggcccga
     1501 tcggggggcg atcgagcggg ggttcgcctc cgcctggatt ccaggccggc tggaccggcg
     1561 gggcaagtgg ctgttcgacg tcgcccacaa cccggacggt atccgctccc tgatcgcggc
     1621 cctggagacc ctcgctccgc cccggccgat ccacggcctc atctcgatcc tgggcgacaa
     1681 ggagtggccc gagatgctgg tgcagctcga ccgcgtgatc gatcgcggga tcctcaccgt
     1741 cgcgcccacg gccgcgagcc gggggtggga tgccgcctgg ctccggcgct ggctcaacga
     1801 cgcctcccgc ccgccggcgc gcgcctcgtg gtcgctggtg ccggacttcc acgccgcgct
     1861 cgaggaagcg cgacgcgggg cggggaccat cctggtcacg ggctcgttcc atacggtagg
     1921 ggatgtgatg ggtgagctgg gtctgtaggc gctcgctccg accgatgccc ccaactatta
     1981 tcctgcccat gcaaacccag gccctgccgg gatttcgcga tttctatccc gccgatctgg
     2041 cgatccggga ctacatcttc cggacctggc ggcaggtcgc cgcccggtac gggttcgagg
     2101 agtacgacgg accgccgctg gagccgctgg agctctatac cgccaagagc ggcgcggaga
     2161 tcgtggggca gctctacagc ttcaccgaca agggcggtcg ggaggtctcc ctccgccccg
     2221 agatgacgcc gacgctcgcg cgcatggtcg cggcgcgggc caacgggctg aagaaaccga
     2281 tccgctggtt ctcgatcccg cagctcttcc gctacgagcg ccagcagcgg ggccggctgc
     2341 gggagcactt tcagctcaac tgcgatctga tcggcgaggc cggtcatttg gccgacgccg
     2401 agatcgtggc gctggcagtg gatgcggtgc gggccttcgg cctcggcccc gaggacgttc
     2461 gcgtgcggct ctccgaccgg cggctgctca cggcactgct ggacgcgctg ggcgtgggcg
     2521 agaagcaggt ggccacggtc taccaggtct tcgacaagct gcgccggaca ccggaagacg
     2581 cgtcggtccg ccggctcacc gaagcgggac tcgcgccggc ggcggtggat cgcctcctcg
     2641 cggtggcgcg ggcgcggaac tgggacgatc tcgcccgggt ggacccggtc gttgccggtg
     2701 cgctcgacca gggcgactcc ctccggcgta cgctcgacgc gctccgggcc atggggttcg
     2761 gggaccacct cgatctcgac ctcgccatcg tgcgcgggct cgcgtactac accgggaccg
     2821 tgttcgagct gttcgacgcc cggggggagc tgcgcgccat ctgcggcggc ggccgctacg
     2881 acaacctgct ggagtcgctc ggcggcgtgg acctgcccgc cctcgggttc ggcatgggcg
     2941 acgtggtgct gggcgagttg ctccgcgagc gggggctggc gccgcccgcc ggggccaccg
     3001 tggacgtgtt tctcgcggcg atcacccagg acgatctggc ggaggtcctg gggctcgcgc
     3061 gcgagctgcg tgacgccgga ctccgggtgg aatacgcgct ggcgccgcag gcggtgggca
     3121 aacagctcaa gctcgccgac gcgcgcggcg cacggctggc gatcgtggtc gggccggacg
     3181 accgggcccg tggggaggtg atggtgaagg atctccgcgg gaaggggcag gagtcggtgg
     3241 ggcggggcgc gctccgggag catgtggagg gagtggtgcg aggcactgcg ttgtcaccct
     3301 gagcggggcg aaggggccca tgccggcatg gcctccttcg cttcgctcag gatgacatcg
     3361 tgaagcaaaa cggaaaagga agcgagaccg agatggcgga agcgaaggcg ttgactccca
     3421 gggcgaccga cttcagcgcc tggtacaacg agctgattgc gagggccgag ctggcggact
     3481 acagccccgt ccgcgggtgc atggtcatcc gcccgaacgg ctacgccatc tgggagcaga
     3541 tgcagcgcgc cctggaccag atgttcaagg acaccggtca ccagaacgcg tacttcccgc
     3601 tgttcatccc gcagagtttc ctcagcaggg aggcggagca cgtcgaggga ttcgcgcccg
     3661 agaccgcggt cgtcacccac ggcggcggca aggagctgga agagccgctg gtcgtgcggc
     3721 cgacctccga gaccatcatc tacgccatgt acgccaagtg gatccagagc taccgggacc
     3781 tgcccctgct gatcaaccag tgggccaacg tggtccgctg ggagatgcgc acgcggctct
     3841 tcctccggac caccgaattc ctctggcagg agggccacac ggcgcacgcc accgaggcgg
     3901 aggcggagga ggaggctcgc cgcatgctcg gcgtctatcg gacgttcatg gaggaatgga
     3961 tggcgatgcc ggtcgtcacc ggccggaaga cggacagcga gcgcttcgcc ggggcccttc
     4021 gcacctacag ttgcgaggcg atgatgcagg acaacaaggc gctccaggcc gggaccagcc
     4081 acaacctggg ccagaatttc gcccgcgcct tcgacatctt cttctcttcc gactcgggca
     4141 gccgtgagct ggcgtggacc acctcgtggg gcacgtccac ccgcatgctc ggcggtctga
     4201 tcatgtgcca cggagacgac aacggcctgc
//
LOCUS       DASUYN010000643         3340 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_202786, whole genome shotgun sequence.
ACCESSION   DASUYN010000643 DASUYN010000000
VERSION     DASUYN010000643.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3340)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3340)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3340
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_202786"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(99..383)
                     /locus_tag="VF061_12535"
     CDS             complement(99..383)
                     /locus_tag="VF061_12535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF485 domain-containing protein"
                     /protein_id="HEX6670385.1"
                     /translation="MNGPAGSVRELDAARWRVALALTGAMVVLYFGFILLVAYGRRVL
                     AIQVVPGLTLGILLGALVIVASWLLTWVYVRWAATHYDPRVEALSRREES"
     gene            complement(380..1804)
                     /locus_tag="VF061_12540"
     CDS             complement(380..1804)
                     /locus_tag="VF061_12540"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HEX6670386.1"
                     /translation="MTAPALRTAPVPTPAPELHRAMGFRDLLLFYLVTGFTVRWIGTA
                     AAAGPSAVVIWIGAGLLFYLPLLFTVLELSSRYPHEGGCYVWSKRAFGDFAGFMTGWH
                     YWTCNLPYFPGLFYFTAASALFIGGPSWQGLTDSPAYYVGFSLVALALAAGLNVRGLG
                     VGKWLHNIGAVGLWVPALILMGLAVVSWSRFGSATPFTAESLVPSTRLKDIIFWSTIA
                     FSLSGLESASMMGDEIRDPRRNIPRALLIGGSLIVLLYTLSTVAMLVALPQAQILSLQ
                     GFMLSIREAADRVGAVGLASVTALLITVGGLGQAGAWFAAGGRLPFVAGIDRFLPAAF
                     GRIHPRYGSPHVSLLVQAAIAALFIFLGQAGTTVKGAYDVLVSMSIIGYFIPYLFMFA
                     SMIKLQSEPAGPDVMRVPGGRPVATLLGGLGFTVTAATIVLALIPAEDEPNKALAVTK
                     VAGLTALLFLAGMAVYAGGRRRQA"
     gene            complement(1801..2967)
                     /gene="solA"
                     /locus_tag="VF061_12545"
     CDS             complement(1801..2967)
                     /gene="solA"
                     /locus_tag="VF061_12545"
                     /EC_number="1.5.3.2"
                     /inference="COORDINATES: protein motif:HMM:NF008425.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050131 - N-methyl-L-amino-acid oxidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-methyl-L-tryptophan oxidase"
                     /protein_id="HEX6670387.1"
                     /translation="MKTDYEYVVLGLGGFGSAAAYWLARREGTEVLGLEQFELGHVRG
                     ESQDHSRIIRLSYHTPGYVELAKFAYRAWEELERDSGEQVVLRTGGLDVGPRESAISL
                     SSYSDSMDAAGVKYERLDAGEIMRRWPQWRLDDAMHGLFQERSGIAMAARANAAHVRM
                     AREHGATLRDRTPVEEIRSSAGEVEVRTADASYRCRRLIVSAGAWSNRALASVGIELP
                     LRVTKEQVTYFASPRPEEFQPERFPIWIWMDDPCFYGFPVFGEAGPKVGQDAGGRETT
                     ADTRTFDPDLEARDRVVRFLERHLPGALGPIIYTKTCLYTLTPDRDFVLDVLPEHPEI
                     AVAIGGGHGFKFASLIGQILSELSIDGHSPRDLAPFRIDRPILQLKDPPRNYMV"
     gene            complement(2964..>3340)
                     /locus_tag="VF061_12550"
     CDS             complement(2964..>3340)
                     /locus_tag="VF061_12550"
                     /inference="COORDINATES: protein motif:HMM:NF013044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEX6670388.1"
                     /translation="SEDERVRHKGELVYPNLLLSLSAEHVAVFTIWPHAPARTTVVCE
                     FLFHPDEMAMPGFDPADAVDFWDLVNRQDWAICESVQRGMSSRVFETGYYAPMESWSL
                     DIRRYVGERLGEGREGGPADRR"
BASE COUNT          558 a         1173 c         1176 g          433 t
ORIGIN      
        1 cgcggcgtag aactgctcgg tggtgcgggt gcggcgcgca gcccaccagg tgatccccag
       61 cgtgatcgcg atgaaggcga ggaagaagaa ggtctgggtc acgactcctc ccgccggctc
      121 agcgcctcga ccctggggtc gtagtgcgtc gccgcccagc gcacgtacac ccaggtgagc
      181 agccaggagg ccacgatgac cagcgcgccc agcaggatgc cgagggtgag gccgggcacg
      241 acctggatcg cgagcacccg ccggccatag gccaccagca ggatgaagcc gaagtacagc
      301 accaccatcg ccccggtgag cgcgagggcg acgcgccagc gggcggcgtc cagctcccgc
      361 accgatccgg ccggcccgtt catgcctgcc tccgccggcc gccggcgtac accgccatcc
      421 ccgcgaggaa gagcagcgcc gtgagtcccg ccaccttggt caccgccagc gccttgttgg
      481 gctcgtcctc cgccgggatc agcgcgagca cgatcgtcgc ggcggtgacg gtgaagccga
      541 ggccgcccaa cagggtcgcc acgggccgcc cgccgggcac ccgcatgaca tcggggcccg
      601 cgggctcgga ctggagcttg atcatggagg cgaacatgaa gagataggga atgaagtacc
      661 cgatgatgga catgctgacc agcacgtcgt acgcgccctt caccgtggtg cccgcctgcc
      721 cgagaaagat gaacagggcc gcgatcgccg cctggaccag gaggctcacg tggggggagc
      781 cgtaccgcgg gtggatccgg ccgaaggcgg ccgggagaaa gcggtcgatg ccggcgacga
      841 acggcagccg gcctcccgcc gcgaaccagg ccccggcctg ccccaggccc ccgacggtga
      901 tcagcagggc ggtcaccgag gcgaggccga cggcgcccac ccggtccgcc gcctcccgga
      961 tcgagagcat gaatccctgg aggctcagga tctgcgcctg gggcagggcc accagcatcg
     1021 cgacggtgga cagggtgtag agcagcacga tgagcgagcc gccgatgagc agcgcgcggg
     1081 ggatgttgcg ccgcgggtcg cggatctcgt cgcccatcat ggaggcgctc tccagcccgc
     1141 tcagcgagaa cgcgatggtg gaccagaaga tgatgtcctt gagccgggtg ctcggcacca
     1201 ggctctccgc ggtgaacggc gtggccgagc cgaagcggga ccaggagacc acggcgagtc
     1261 ccatcaggat gagcgcggga acccagagcc ctacggcgcc gatgttgtgg agccacttcc
     1321 ccacgccgag cccccgcacg ttgagccccg ccgccagggc cagcgcgacg agggagaagc
     1381 cgacataata cgccgggctg tcggtcagac cctgccagga cgggccgccg atgaagaggg
     1441 cgctcgccgc ggtgaagtag aagaggcccg ggaaatacgg gaggttgcag gtccagtagt
     1501 gccagccggt catgaagccc gcgaagtcgc cgaacgcgcg cttgctccag acgtagcacc
     1561 cgccttcgtg cgggtagcgc gacgagagct ccaggaccgt gaacaggagc ggcaggtaga
     1621 agaggagccc ggccccgatc cagatcacca ccgcgctcgg cccggccgcc gcggccgtgc
     1681 cgatccagcg gacggtgaag ccggtgacca ggtagaagag cagcaggtcc cggaagccca
     1741 tcgcccggtg cagctctggg gcgggcgtcg gcaccggcgc ggtccggagg gcgggtgcgg
     1801 tcacaccata tagttccgcg gggggtcctt cagctggagg atcggacgat cgatccggaa
     1861 cggcgcgaga tcgcggggtg aatggccgtc gatggagagc tccgagagga tctggccgat
     1921 gagcgaggcg aacttgaacc cgtgcccgcc gccgatcgcg actgcgatct ccggatgctc
     1981 gggcagcacg tcgagcacga aatcccgatc gggcgtcagg gtgtagaggc aggtcttggt
     2041 gtagatgatc ggccccaggg cgcccggcag gtgccgctcc aggaagcgca ccacccggtc
     2101 ccgcgcctcg agatcgggat cgaaggtgcg ggtgtcggcg gtcgtctccc ggccgccggc
     2161 gtcctgcccc accttggggc ccgcctcccc gaacacggga aacccgtaga agcaggggtc
     2221 gtccatccag atccagatcg gaaaccgctc cggctggaac tcctcgggcc gcggcgaggc
     2281 gaagtaggtg acctgctcct tggtcaccct cagcggcaac tcgatgccca ccgaggcgag
     2341 ggcccggttg gaccaggccc ccgcgctgac gatgagccgg cggcagcggt agctggcgtc
     2401 ggcggtgcgc acctcgacct cgcccgcgga ggaacggatc tcctccaccg gcgtgcggtc
     2461 gcggagggtg gcgccgtgct cccgcgccat ccgcacgtgc gcggcattcg cccgcgcggc
     2521 catcgcgatg ccgctccgct cctggaacag cccgtgcatg gcgtcgtcga gccgccactg
     2581 gggccagcgg cgcatgatct ccccggcgtc gagccgctcg tacttcacgc cggcggcgtc
     2641 catgctgtcg ctgtagctgc tgagggagat cgcgctctcc cgcggtccca cgtcgagccc
     2701 accggtgcga agcacgacct gctcgcccga gtcccgctcc agctcctccc aggcgcgata
     2761 ggcgaacttc gccagctcga cgtagcccgg cgtgtgatag gagagccgga tgatccgcga
     2821 atggtcctgg gactcgcccc gcacgtggcc cagctcgaac tgctccagcc ccagcacctc
     2881 ggtcccctcc cggcgggcga gccagtaggc cgcggcgctg ccgaaaccgc ccaggccgag
     2941 gacgacgtat tcgtagtcgg tcttcatcgg cggtccgccg gcccgccctc tcgcccctct
     3001 cccagtctct cccccacgta tcgccggatg tccaggctcc aactctccat cggcgcgtag
     3061 tagccggtct cgaacacccg cgagctcatg ccccgctgca ccgactcgca gatcgcccag
     3121 tcctggcggt tcaccaggtc ccagaagtcc accgcgtcgg cggggtcgaa tcccggcatg
     3181 gccatttcgt cggggtggaa cagaaactcg cagaccaccg tggtgcgcgc gggcgcgtgg
     3241 ggccagatgg tgaagacggc gacgtgctcc gccgagaggc tgagcaggag gttggggtag
     3301 accagctccc ccttgtggcg cacccgttcg tcctcgctca
//
LOCUS       DASUYN010000644         2951 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1969125, whole genome shotgun sequence.
ACCESSION   DASUYN010000644 DASUYN010000000
VERSION     DASUYN010000644.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2951)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2951)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2951
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1969125"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..870)
                     /locus_tag="VF061_12555"
     CDS             complement(<1..870)
                     /locus_tag="VF061_12555"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX6670389.1"
                     /translation="MRRSTLVTLTLLAAPFTAEAQERAGQQVSRRERVAGVVDSIARA
                     AIERKVLAGMVVITVRGSDTLLARGYGLADVENDVRMTVGHVFQLASVTKQFTAAAVL
                     ALAQDGRVDLDAPITRYLPNAPVQGRRVTVRQLLSHTSGIPDYAESPRIPALKRLDLP
                     PDSLVALIATTPFYFEPGEQMRYSNTGFALLGMLIEQVSGQPYATYVEQRVLRPAGAT
                     RAHFCDPLALVRHLARGYAATPGGMRPAAFISPHLPYAAGGFCGTAGDLTAWNAALHA
                     SRGGRMLANARYAE"
     gene            complement(881..2053)
                     /locus_tag="VF061_12560"
     CDS             complement(881..2053)
                     /locus_tag="VF061_12560"
                     /inference="COORDINATES: protein motif:HMM:NF012678.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HEX6670390.1"
                     /translation="MTIPSRNLNFPTPIKFGAGRVRELADHCRASGITRPLFVTDPGL
                     AAMPMVGKVVDDVKRAGLGIAVFSDVRPNPVEANVIAGVSAYQAGDHDGVVAFGGGSA
                     LDVGKLVALMHGQRVALFELEDVDDWWTRADASKIAPIVAVPTTAGTGSEVGRAGVVT
                     HPETHEKKIIFHPAIMPRVAILDPELTLGLPPRLTAATGMDAMAHCVESYCAPFYHPL
                     AAGVALEGLRLVKENLARAVKKGMDIDARGHMLMASTMGATAFQRGLGAIHALSHPFG
                     GLYDAHHGTLNGIIMPYVVKANRRKIEREIERAAAYLGIKGGFNGFLKWILALRKEIG
                     IPHRLADIGIDTNRLDQVAAMAIKDPAAGGNPIAFSERQYRALAQRCVNGDLGPIG"
     gene            complement(2050..>2951)
                     /locus_tag="VF061_12565"
     CDS             complement(2050..>2951)
                     /locus_tag="VF061_12565"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEX6670391.1"
                     /translation="VAERFQQAFDRATLPKGVFQHLVLDHQQTAGIIAGGQASMVCFT
                     GSVAGDKAMEEASAGRFINVGLELGGKDPAYVRPDANMAHAIENLVDGAFFNSGQSCC
                     GIERIYVHRKVWDDFLKGFVDLTKKYVLGSPLDQETTLGPMVRAEAAAFVRKQVAAAV
                     RAGARAHIDPKSFPMDKAGTPYMAPQVLTSVTHRMSVMMDESFGPVVGIMKVSGDEEA
                     LELMNDSPYGLTAAIWTQDVDAARAIGDEIRTGTVFMNRCDYLDPALTWTGVKDTGRG
                     ATLSKVGYEALTRPKSYHLRTRT"
BASE COUNT          447 a         1023 c          993 g          488 t
ORIGIN      
        1 ttcggcatac cgagcattgg cgagcatccg cccgccccgg cttgcgtgca gcgcggcatt
       61 ccaggccgtg agatcgcctg cggttccgca gaacccgccg gcagcgtacg gcaggtgggg
      121 actgatgaat gccgcgggcc gcatcccgcc cggcgtggcc gcgtacccgc gcgccaggtg
      181 gcgcaccagc gccaggggat cgcagaagtg tgcccgggtg gctccggcgg ggcggagcac
      241 ccgttgctcg acgtacgtcg catagggttg gccgctcacc tgctcgatca acatgccgag
      301 cagggcaaag ccggtgttgc tgtagcgcat ctgctcgccg ggctcgaagt agaacggcgt
      361 ggtggcgatc agggcgacga gactgtccgg tggcaggtcg agtcgcttga gtgctggaat
      421 gcgcggtgac tcggcatagt cggggatgcc ggacgtgtgg gacaggagct gccgtacggt
      481 aaccctccga ccctgaaccg gggcgttcgg gaggtaccgg gtgatcggcg cgtcgaggtc
      541 gacacggccg tcctgcgcca gcgcgagcac ggccgctgcg gtgaactgtt tggtgaccga
      601 tgcgagctgg aagacgtggc ccacggtcat ccgcacgtcg ttctccacat ccgccagccc
      661 atacccccgc gcaagcaagg tgtcgctgcc gcggaccgtg atgacgacca tcccggccaa
      721 caccttccgc tcgatcgccg cgcgggcgat cgagtcaacg accccggcca cccgttcccg
      781 gcggctcacc tgttgccccg cgcgctcctg ggcttcagcg gtgaagggtg cggcgagcag
      841 ggtcaaggtg accagggtgg atcggcgcat ggagacaaag ctaaccgatg ggtcccaggt
      901 caccgttcac gcaccgctgc gccagcgccc ggtactgccg ttcgctgaag gcgatcgggt
      961 ttccgccggc cgcgggatcc ttgatcgcca tcgccgccac ctggtcgagg cgattcgtgt
     1021 cgatccctat gtccgcgagc cggtggggga tcccgatctc cttccgcagc gccagtatcc
     1081 acttgaggaa gccgttgaag ccgcccttga tgccgaggta ggcggcggcg cgctcgatct
     1141 cccgctcgat cttccgccgg ttcgccttca ccacgtacgg catgatgatg ccgttgagcg
     1201 tgccgtgatg cgcgtcgtac agaccgccga acggatgcga cagcgcgtgg atggcgccga
     1261 gcccgcgctg gaaggccgtg gcccccatcg tggacgccat cagcatgtgc ccgcgcgcgt
     1321 cgatgtccat gcccttcttc acggcccgcg cgaggttctc cttcaccagc cgcaggccct
     1381 cgagggcgac acccgccgca agggggtgat agaacggcgc gcagtacgac tcgacgcagt
     1441 gggccatcgc atccatcccg gtcgcggccg tcagccgggg cggcaggccg agggtcagct
     1501 ccggatcgag gatcgccacc ctgggcatga tcgccggatg gaagatgatc ttcttctcgt
     1561 gggtctcggg atgggtgacg acgccggcgc ggcccacttc cgagccggtg cccgccgtgg
     1621 tcggcacggc gacgatcggg gcgatcttcg aggcgtcggc cctcgtccac cagtcgtcca
     1681 cgtcctccag ctcgaacagg gcgacgcgct ggccgtgcat cagggccacc agcttgccga
     1741 cgtcgagcgc cgagccgccg ccgaaggcca ccacgccgtc gtgatcgccc gcctggtagg
     1801 cgctaacccc cgcgatcacg ttggcctcga cgggattggg gcggacgtcg gagaagaccg
     1861 cgatgccgag gccggcccgc ttcacgtcgt ccacgacctt cccgaccatc ggcatcgccg
     1921 cgagcccggg atcggtcacg aagagcggac gggtgatgcc gcttgccctg cagtggtcgg
     1981 cgagctccct gacccggccc gcgccgaact tgatgggggt cgggaagttc aggttgcggc
     2041 tgggaatcgt catgtcctgg ttctcaggtg atagctcttg ggccgggtca gcgcctcgta
     2101 gcccaccttg gagagcgtcg cgccccggcc ggtgtccttg accccggtcc aggtgagcgc
     2161 cggatcgaga tagtcgcagc ggttcatgaa caccgtgccg gtccggatct cgtcgccgat
     2221 ggcccgggca gcgtccacgt cctgggtcca gatggctgcc gtcagcccgt agggcgaatc
     2281 gttcatcagc tccagcgctt cctcgtcgcc cgacaccttc atgatgccga ccacgggacc
     2341 gaagctctcg tccatcatca cgctcatccg atgcgtcacc gacgtgagca cctgcggcgc
     2401 catgtagggc gtgcccgcct tgtccatggg gaacgacttg gggtcgatat gggcccttgc
     2461 gccggcccgc accgcggccg cgacctgctt gcggacgaac gccgccgcct ccgctctgac
     2521 catcggaccc agcgtcgtct cctggtccag cggtgagccg agcacgtact tcttcgtgag
     2581 atccacgaag cccttgagaa agtcgtccca gaccttcctg tggacgtaga tgcgctcgat
     2641 gccgcagcag ctctgccccg aattgaagaa ggcgccatcc accaggttct cgattgcgtg
     2701 ggccatgttg gcgtccggcc ggacgtaggc cgggtccttc ccaccgagct cgaggcccac
     2761 gttgatgaag cgccccgccg acgcttcctc catcgccttg tcgcccgcca ccgacccggt
     2821 gaagcacacc atgctcgcct gcccgccggc gatgatcccg gcggtctgct ggtgatcgag
     2881 cacgaggtgc tgaaacacgc ccttcgggag cgtcgcccga tcgaaggcct gttggaagcg
     2941 ctcggccacc a
//
LOCUS       DASUYN010000645         2836 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_426375, whole genome shotgun sequence.
ACCESSION   DASUYN010000645 DASUYN010000000
VERSION     DASUYN010000645.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2836)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2836)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2836
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_426375"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..808
                     /locus_tag="VF061_12570"
     CDS             <1..808
                     /locus_tag="VF061_12570"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEX6670392.1"
                     /translation="SAPLAGRVRQIELALERLRWLPPLRGQRAIAVNIPSFRLFAFDS
                     VGGAAGPALQMRVIVGKALDTRTPVLAEQLRYLEFQPYWNVPRSIMIGEILPQLRRRP
                     GYLRAHAMELVGPRGRVVGDSVTPSVLQRLTAGELRLRQRPGPQNPLGRVKFVFPNAA
                     DVYLHGTPDTTLFGRERRDFSHGCIRLERPGDLAAWALSEQPGWGRDSVDAALAARRT
                     RRVPLARPVPVILFYATAVAIPGLGVAFLGDIYGHDRALDQTLRAGRTPP"
     gene            819..1469
                     /locus_tag="VF061_12575"
     CDS             819..1469
                     /locus_tag="VF061_12575"
                     /inference="COORDINATES: protein motif:HMM:NF025029.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase catalytic domain
                     family protein"
                     /protein_id="HEX6670393.1"
                     /translation="MRFRSPAAVLVALALLPAPLGAIPRGDGLVETAAAAGLRPSVLD
                     LALRAHRRALAARLTTSSLLTVIDYSLPSRTRRLWILDLDAGRVLAREYVAHGRNSGD
                     DVARRFSNRAGSLQSSLGLFVTGRVYRGRHGISLRLRGLDPGLNSLAERRAIVIHGAD
                     YVSARTIAALGRLGRSQGCPALDRRAARRVIELIRDGTALFAYHPSVVREPPRDLR"
     gene            1540..2148
                     /locus_tag="VF061_12580"
     CDS             1540..2148
                     /locus_tag="VF061_12580"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VTT domain-containing protein"
                     /protein_id="HEX6670394.1"
                     /translation="MLAARPVHTWVLAQLAAAEMVIRQEQAVGMVVFVLLAALSAMVA
                     FLSSAVLIPVAVYVWGPGVCFLLLWAGWFLGGVAAYAIGRYFGRPIVRRLVRPAALER
                     QERWARSRRSLGAILLLQLAVPTDLAGYAFGLIRCPLRPFLTALALAEIPYAAGAVFL
                     GISFVERRLIPLLALGVVGVALSVLAYRAFHRGDGSEPAGPP"
     gene            2248..2616
                     /locus_tag="VF061_12585"
     CDS             2248..2616
                     /locus_tag="VF061_12585"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX6670395.1"
                     /translation="MRLLIVEDDYKLGSLLEQGLREEGFDPDWVKTGDEAVTRAMTSS
                     YELLLLDYMLPGKDGRQVASELRAAGRRLPILLLTALDAPDDIRLAMEAGVSDVMGKP
                     FRFAELIDRIRQLVSTSVSG"
     gene            2627..>2836
                     /locus_tag="VF061_12590"
     CDS             2627..>2836
                     /locus_tag="VF061_12590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670396.1"
                     /translation="MASSLRRTLAVRYSLTMAVALVAIALWAYAGMRRLLRDQLDRSL
                     HSTLELQALALSHDGRILPVPPMDER"
BASE COUNT          331 a         1035 c         1004 g          466 t
ORIGIN      
        1 gagcgccccg ctcgccgggc gggtgcggca gatcgagctg gcgctggagc ggctgcggtg
       61 gctgcccccg ctgcgggggc agcgagccat cgcggtgaac atcccatcct tccggctgtt
      121 cgcgttcgac tcggtgggcg gagcggccgg ccccgcgctc cagatgcggg tgatcgtcgg
      181 caaggccctg gacacccgaa cgccggtgct ggcggaacag ctcaggtacc tcgagttcca
      241 gccgtactgg aacgtgcccc gcagcatcat gatcggagaa attctccccc aactgcgccg
      301 ccggcccggc tacctgcggg cgcatgcgat ggagctggtg gggccgcggg gtcgggtggt
      361 gggcgacagc gtgacgccgt cggtcctgca gcgactcacc gccggagagt tgcggctgcg
      421 gcagcgaccc gggccgcaga acccgctggg ccgggtgaag ttcgtgttcc ccaatgcggc
      481 ggacgtctat ctccatggaa ccccggacac gacgctgttc gggcgtgagc gccgggactt
      541 cagccacggt tgtattcggc tggagcggcc tggcgatctc gccgcctggg cactgagcga
      601 gcagccgggc tggggtcgcg acagcgtgga cgccgcgctc gcagcaaggc gcacccgccg
      661 cgtcccgctc gcccgcccgg taccggtgat cctcttctat gctaccgcgg tcgccatccc
      721 gggactcggg gtcgcattcc tgggcgacat ctatggccac gaccgggcgc tggaccagac
      781 cttgcgcgcc gggcggaccc cgccgtagcc tcccgacgat gagattccgc tcccctgcgg
      841 ccgtcctggt cgcactcgcc ctgctccccg caccgctcgg ggccatcccg cgcggcgacg
      901 gactcgtgga gaccgcggcg gccgccgggc tgcgaccgag cgtgctcgac ctcgcgctcc
      961 gcgcccatcg ccgcgcgctc gcggcacgac tcacgaccag ttccctgctc acggtcatcg
     1021 actacagcct cccctcgcgg actcggcggc tgtggatcct ggacctcgac gccgggcggg
     1081 tgctcgcgcg agaatacgtg gcccacgggc ggaactcggg cgacgatgtg gcgcggcggt
     1141 tcagcaatcg cgcggggagc ctgcaaagca gcctggggct gttcgtcacc ggccgggtgt
     1201 atcgtggccg gcacgggatc tcgctccggc tgcgcgggtt ggacccgggc ctgaacagtc
     1261 tggcggagcg gcgggccatc gtgattcacg gggcggacta cgtgagcgcc cgcacgatcg
     1321 cggcgctcgg ccgtctgggg cgaagccagg gttgcccggc gctggatcgc cgcgcggctc
     1381 gacgggtcat cgagctgatt cgcgacggca ccgcgctctt cgcctaccac ccctccgtcg
     1441 tccgcgagcc gccccgcgac ctccgctgat tcgccgtcat ccttccgcgg tccgcggcgc
     1501 gccgcggtca tcgtagcgct gctggccctc gcgaccgccg tgctggcggc gcggccggtt
     1561 cacacctggg tgctggcgca gctcgccgcc gccgagatgg tgatcaggca ggagcaggcg
     1621 gtcggcatgg tggtgttcgt gctgctcgcg gcgctctcgg cgatggtcgc cttcctcagc
     1681 agcgcggtgc tgatcccggt cgccgtgtac gtctgggggc ctggggtctg tttcctcctg
     1741 ctctgggccg gctggttcct gggcggggtc gccgcctacg ccatcgggcg gtacttcggc
     1801 cgacccatcg tgcggcggct ggtccggccc gccgccctgg agcggcagga gcggtgggcg
     1861 cgctctcgac gctcgctcgg cgccatcctc ctgctgcagc tggcggtccc caccgacctg
     1921 gccggttacg cgttcgggct gatccgctgc ccgctccgcc ccttcctcac ggcgctcgcc
     1981 ctggccgaga ttccctacgc ggcgggagcc gtcttcctcg ggatcagctt cgtggagcga
     2041 cgcctgatac cgctcctggc gcttggggtg gtgggagtgg ccctcagcgt cctggcgtat
     2101 cgggcgtttc atcgtggcga cgggtcggag ccggccgggc cgccttgacg gcccgcgcga
     2161 tctctccttc cgtctctcct cacgctttct tcatcgtccc gctggcatcc ttcagcccat
     2221 cgacgccacc accgcaacgg ggccgccatg cgcctactca tcgtggaaga cgactacaag
     2281 ctcggctcgc tcctggagca gggacttcgc gaggagggct tcgacccgga ctgggtcaag
     2341 accggcgacg aggccgtcac ccgcgcgatg acctcctcct acgagctgct gctcctcgac
     2401 tacatgctgc cgggcaagga cggccgacag gtcgcgagtg agctgcgggc ggcgggccgg
     2461 cgcctgccga tcctcctgct gaccgcactg gacgcgcccg acgacatccg gctcgccatg
     2521 gaggccgggg tcagcgacgt catgggtaag cccttccgct tcgccgagct gatcgaccgc
     2581 atccggcagc tcgtctccac gtccgtgtcc ggctgagcgt ccggggatgg cgtcgagcct
     2641 ccgccgcacc cttgcggtcc gctactcgct caccatggcg gtggcgctgg tggccatcgc
     2701 gctgtgggcg tatgcgggga tgcggcggct gctgagggat cagctcgatc ggtcgctcca
     2761 cagcacgctc gagctgcagg ccctggccct gtcccacgat ggccggattc tgcccgtccc
     2821 gccgatggac gagcgg
//
LOCUS       DASUYN010000646         2301 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_427152, whole genome shotgun sequence.
ACCESSION   DASUYN010000646 DASUYN010000000
VERSION     DASUYN010000646.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2301)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2301)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2301
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_427152"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..402
                     /locus_tag="VF061_12595"
     CDS             <1..402
                     /locus_tag="VF061_12595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670397.1"
                     /translation="KRPIMLAKADIVSCTVLALEPGYCNVTLTATARKRRTESVAGSA
                     ALAGFGAVGTGVLAAVGAILPVVLVPLPLGLGLGYLVVREYRPVVERIQLGLERVLDQ
                     LEHGRRTDRSLPPPPRLIDLLANEVRKALSN"
     gene            452..1087
                     /locus_tag="VF061_12600"
     CDS             452..1087
                     /locus_tag="VF061_12600"
                     /inference="COORDINATES: protein motif:HMM:NF021505.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2231 domain-containing protein"
                     /protein_id="HEX6670398.1"
                     /translation="MFGYDWPRLHAALNDLPTALLVTAALFELLALATRREGFRQVSF
                     WTLMVGALGGVAAVLSGLQAEENIAHGDEVHRVMETHELLAFVTLGIFGVLAVWRLWR
                     ERRMGTGERALALAATLVGAGVLIATSVYGGRLVFDHAAGIPTEVLTAESRSRTEGHE
                     HGPGEGHGDDGHSHDASRADTTTTDSPDTAGAAAGARDSHSHPAGTPAHDH"
     gene            1091..1690
                     /locus_tag="VF061_12605"
     CDS             1091..1690
                     /locus_tag="VF061_12605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670399.1"
                     /translation="MASPRWIAAAALLAACRPDTTRPAITPYPEAAAIEIRLRSPEAT
                     RRLAEALQADSLPPARVRLRDGYLETAWLDSATGQPTTRRPLGTSVIRLRAWADPGRP
                     GNTVLTVETLYRPLADPSLPERELERQVPRTHPAAVKVERILAALLERHGGPPPPAAE
                     QPAAEGGPGEPPEAPMDEGAGDVESGDEDAGTGDDDVSP"
     gene            complement(1717..>2301)
                     /locus_tag="VF061_12610"
     CDS             complement(1717..>2301)
                     /locus_tag="VF061_12610"
                     /inference="COORDINATES: protein motif:HMM:NF014078.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF116 domain-containing protein"
                     /protein_id="HEX6670400.1"
                     /translation="LLHPAVPTICWVALGTAVILCWIWWAVLFLSYGTGRALLPERLA
                     ERGPFLRLMRLTSRLAQRFGRRDWVENAAVKVYNALARVRGRKVGKGELLLLIPRCLS
                     KETLDGVLGVAGRYGVPVFVATRGQLARRVIRERRPRAVVAVACERDMVSGLHDVAGK
                     VPVLGLTMTLPSGPCKDALLDLGKLEDWVKSYVV"
BASE COUNT          337 a          849 c          807 g          308 t
ORIGIN      
        1 aagcgcccca tcatgctggc gaaggcggac atcgtgtcct gcaccgtgct cgcgctcgag
       61 cccggctact gcaacgtcac cctcaccgcc acggcccgga agcggcggac cgaatcggtg
      121 gccggcagcg cggcgctcgc cggcttcggc gcggtgggca ccggcgtgct ggccgccgtg
      181 ggagccatcc ttcccgtcgt gctggtcccg ctgccgctgg gcctgggact gggctatctc
      241 gtcgtccggg aataccggcc ggtcgtcgag cgcatccagc tgggcctcga gcgggtgttg
      301 gaccagctgg agcacgggcg tcgcaccgac cgcagcctcc cccctcctcc ccggctgatc
      361 gatctgctgg ccaacgaggt ccgcaaggcc ctcagtaact gaccggctat aattctgccc
      421 gaccacccgg cccaagcctc gaggagaccc gatgttcggt tacgactggc cgcgacttca
      481 tgccgcgctc aacgacctgc ccaccgccct gctggtgacc gcggccctgt tcgagctgct
      541 ggccctggcg acgcggcggg aaggcttccg ccaggtctcc ttctggacct tgatggtcgg
      601 cgcgctgggg ggcgtcgccg cggtcctgtc cgggctgcag gcggaggaga acatcgcgca
      661 cggcgatgag gtccaccggg tgatggagac ccacgaactg ctggccttcg tcactctggg
      721 gattttcggt gtgctggcgg tctggcggct gtggcgggag cggcggatgg gaacgggcga
      781 gcgggcgctg gcgctggcgg cgaccctggt gggcgcgggt gtgctgatcg cgacctcggt
      841 ctacggcggg cggctcgtgt tcgatcacgc ggccggcatc ccgacggagg tgctcaccgc
      901 ggagagccgc tcgcgtaccg agggccacga gcacgggccg ggcgagggac acggcgacga
      961 cgggcattcg cacgatgcct cccgcgccga cacgacgacc accgattctc ccgacaccgc
     1021 gggggcggcc gcgggcgcca gggacagtca cagtcatccg gcgggcacgc cggcacacga
     1081 ccactagccc gtggcgtccc cgcgctggat cgccgccgcc gccttgctcg cggcctgccg
     1141 gccggacacg acccgcccgg cgatcacgcc gtatcccgaa gcggcggcca tcgagatccg
     1201 gctgcgttct ccggaggcga cccggcgtct cgccgaagcg ctccaggcgg actcgctgcc
     1261 acccgcgcgc gtgcgcctgc gcgacgggta cctggagacc gcctggctcg actcggccac
     1321 gggccagccg acgaccaggc ggcccctcgg caccagcgtg atccgcctgc gagcctgggc
     1381 cgatccgggc aggccgggga atacggtgct gacggtggag acgctgtacc gcccgctcgc
     1441 ggatccttcg ctgccggagc gggagctgga gcgccaggtc cctcggaccc atcccgccgc
     1501 ggtgaaggtc gagcggatcc tggccgccct cctcgagcgc cacggtggcc caccgcctcc
     1561 ggctgccgag cagcctgcgg ccgagggggg gccaggtgag ccgccggagg ctccgatgga
     1621 tgagggtgcc ggtgacgtcg agagcggcga cgaggacgcg ggtacggggg acgatgacgt
     1681 gtcaccctga acgcaacgaa gggtgacggt cgcgtcctac accacgtacg acttcaccca
     1741 atcctccagc ttccccagat cgagcagtgc gtccttgcag ggcccggagg gaagcgtcat
     1801 ggtgagcccg agcaccggca ccttccccgc cacgtcgtgc agaccgctca ccatgtctcg
     1861 ctcgcaggcc accgccacta ccgcccgtgg ccgccgttcg cggatcaccc gacgagccag
     1921 ctggccccgc gtggccacga acaccggcac gccgtaccgc cccgccacac cgaggacacc
     1981 gtcgagtgtc tccttggaga ggcaccgcgg gatgagcagc agcagctcgc ccttgccgac
     2041 cttccggccg cggacccgcg ccagcgcgtt gtagaccttc accgccgcgt tctcgaccca
     2101 gtcccgccgc ccgaaccgct gcgccagccg cgatgtcagc cgcatcagcc gcaggaacgg
     2161 cccccgctcg gccagccgct cgggcagaag ggctcggccc gttccataag aaaggaagag
     2221 aacggcccac cagatccagc acaggatgac ggcggtgccg agtgcgaccc agcatatggt
     2281 ggggaccgcg ggatgaagca g
//
LOCUS       DASUYN010000647         2829 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1529898, whole genome shotgun sequence.
ACCESSION   DASUYN010000647 DASUYN010000000
VERSION     DASUYN010000647.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2829)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2829)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2829
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1529898"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..965)
                     /locus_tag="VF061_12615"
     CDS             complement(<1..965)
                     /locus_tag="VF061_12615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEX6670401.1"
                     /translation="MIRNLAIIAHVDHGKTTLVDQMLRQAGAFRANQQVEERVMDSNP
                     LERERGITILAKNTAVRWEGTKINIVDTPGHADFGGEVERILRMVDGVLILVDAAEGP
                     MPQTRFVTRKALALGLRPIIAINKIDRADAEPLRVHDEVLGLFLDLDATHEQLDAPFL
                     YTSSRAGTATTELERPGTDLRPLFQAILDHVPPPTGDPEGPFQMLVSTLDFSSFLGRI
                     AIGRIERGRVRVGDQVALLPLGAPGLVEGEEFERNRVTRLYTFDGLNRVEVGEAEAGD
                     IVALSGFETIEIGRTFTAVEHPERLAGIAVEEPTISVDVIVNNSP"
     gene            complement(1106..2020)
                     /locus_tag="VF061_12620"
     CDS             complement(1106..2020)
                     /locus_tag="VF061_12620"
                     /inference="COORDINATES: protein motif:HMM:TIGR01297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HEX6670402.1"
                     /translation="MATAMQQSRLRWVLALTGTFMVVEAVGGWIAGSLALLADAGHML
                     TDVGALGLSLLTAWIAQRPADDTKTYGYLRWEILAALVNGAALFGIAAWVVVEAVQRI
                     QNPQPVRTGLFLTVAIAGLLVNLASLAALHSHREGSLNVRGAYLHVLGDALGSVGAVA
                     AAVIIALTGWTVADPIVSILLSLLILLGAARLLRDSTDILLESVPRHVSMAEVQRRML
                     AVPGVEAVHDLHVWTVTSGMVAMSGHAVVPDLEAHPGVLDGIRQELARLGIGHVTIQL
                     EVEPGCEGCDGPRESALAPHHHHHGHRH"
     gene            complement(2037..>2829)
                     /gene="hisD"
                     /locus_tag="VF061_12625"
     CDS             complement(2037..>2829)
                     /gene="hisD"
                     /locus_tag="VF061_12625"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: protein motif:HMM:TIGR00069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004399 - histidinol dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HEX6670403.1"
                     /translation="AACALSGVTRVFRIGGAQAVAALAFGTATVPRVDKIVGPGNRWV
                     AEAKRQVVGQVGIDMIAGPTEILIIADGTASPRHVAADMIAQAEHDEDATSWCVTTDV
                     ALADALPAALASALATAPRAAIARAALERNGAVIVVPDLRDAIEVANRRAPEHLEILA
                     EGAERIAAGVRHAGAIFLGDQTPEPVGDYLAGPSHVLPTGGTARHASPLGVYDFVKRT
                     SVIRYTAERLAADAPAIVALAEAEGLHGHAEAVRVRSAPDGGTAR"
BASE COUNT          414 a         1049 c          973 g          393 t
ORIGIN      
        1 aaggggctgt tgttgacgat gacgtccacc gagatggtgg gctcctccac cgcgatcccc
       61 gccagccgct ccgggtgctc caccgccgtg aacgtgcggc cgatctcgat ggtctcgaag
      121 cccgagagcg ccacgatgtc accggcctcg gcctcgccca cctccacccg gttgagcccg
      181 tcgaaggtgt agagccgggt cacccggttc cgctcgaact cctcgccctc caccagaccg
      241 ggcgccccca gcggcagcag cgccacctgg tcgcccaccc tgacccggcc tcgctcgatc
      301 cgcccgatcg cgatccgccc caggaagctg gagaagtcga gggtcgagac cagcatctgg
      361 aagggtccct cgggatcgcc ggtcggcggc gggacgtggt cgaggatcgc ctggaacagc
      421 ggccgcagat cggtgccggg gcgctccagc tcggtcgtcg cggtgcccgc gcggctcgag
      481 gtatagagga acggcgcgtc cagctgctcg tgggtcgcat ccagatcgag gaagaggccg
      541 aggacctcgt cgtgcacccg gagcggctcg gcgtcggccc ggtcgatctt gttgatggcg
      601 atgatcggcc ggagccccag cgccagggcc ttccgggtga cgaaccgcgt ctgcggcatc
      661 ggcccctcgg cggcgtccac caggatcagc acgccgtcca ccatccgcag gatccgctcg
      721 acctcgccgc cgaagtcggc gtggcccggg gtatccacga tgttgatctt ggtcccctcc
      781 cagcgcaccg cggtattctt ggccaggatg gtgatgccgc gctcccgctc cagcgggttg
      841 gagtccatca cccgctcctc cacctgctgg ttcgcccgga aggcgccagc ctgccgcagc
      901 atctgatcca ccagcgtggt cttgccgtgg tcgacgtggg cgatgatggc gaggttgcgg
      961 atcaacggga tgtcccgatc aacgaaatgt cctggctcca gcggggaggg aacggttgag
     1021 gcccggggac cgggcctccg cggcgcatat atagacgacg cctaccgatg ccgcaagaga
     1081 gcgcggaggg gtccgccgcg ccctctcagt ggcggtgtcc gtggtggtgg tgatgggggg
     1141 cgagggcgga ctcccgcggg ccgtcacacc cctcgcagcc gggctcgacc tcgagctgaa
     1201 tggtgacgtg tccgatgccc agccgcgcca gctcctgacg gatcccgtcc agcacacccg
     1261 gatgggcctc caggtcgggc acgaccgcgt gaccgctcat cgccaccatg ccgctggtga
     1321 ccgtccacac gtgcaggtcg tgcaccgcct cgaccccggg cacggccagc atgcgccgct
     1381 gcacctccgc catggagacg tggcggggca ccgattccag cagaatgtcg gtgctgtccc
     1441 ggagcagccg ggccgcgccg agcaggatca ggagggacag cagaatggag acgatcgggt
     1501 cggccacggt ccagccggtc aacgcgatga tcacggcggc ggccacggcg cccaccgagc
     1561 ccagggcgtc gcccaggacg tggaggtagg caccccggac gttgaggctg ccctcccggt
     1621 gggagtgcag ggcggccaga ctggcgaggt tcaccagcag gcccgcgatc gccaccgtca
     1681 ggaacagtcc ggtccgcacc ggctggggat tctggatccg ctgaaccgcc tcgaccacca
     1741 cccaggccgc gatgccgaac agggccgcgc cgttcaccag cgccgccagg atctcccagc
     1801 gcaggtagcc gtaggtcttg gtgtcgtcgg cgggccgctg ggcgatccac gcggtcagca
     1861 gggaaaggcc gagggcgccg acgtcggtga gcatgtgccc cgcatcggca aggagcgcca
     1921 gggatccggc gatccagccc cccacggcct cgaccaccat gaaggtgccg gtgagggcga
     1981 gcacccagcg caggcgggac tgctgcatcg cggtcgccat gcccgaatcc tagccgctac
     2041 cgcgcggttc cgccgtccgg cgcactccgc acccgtaccg cctccgcatg cccgtggagc
     2101 ccctcggcct ccgccaacgc cacgatggcg ggggcatccg ccgccagccg ctccgccgta
     2161 tagcggatca cgctggtccg cttcacgaag tcgtacaccc ccagcggaga ggcgtgccgc
     2221 gcggtgcctc ccgtgggaag cacgtggctc ggtcccgcca ggtagtcgcc caccggctcg
     2281 ggcgtctgat cgcccaggaa gatcgccccc gcgtggcgga cgccggccgc aatccgttcc
     2341 gcgccctccg ccagaatctc caggtgctcg ggcgcacgac ggttcgccac ttcgatcgcg
     2401 tcccgcaggt cgggcaccac gatgaccgcg ccgttccgct ccagcgcggc cctcgcgatc
     2461 gccgccctgg gcgcggtggc cagggccgat gccagcgccg cggggagggc gtcggccagg
     2521 gcaacgtcgg tcgtcacgca ccagctggtg gcgtcctcgt cgtgctccgc ctgggcgatc
     2581 atgtcggccg cgacatgccg gggagatgcg gtgccgtcgg cgatgatcag gatctcggtc
     2641 ggtcccgcga tcatgtcgat ccccacctgg cccaccacct gccgcttggc ctccgccacc
     2701 cagcggttgc ccggacccac gatcttgtcc acccggggca ccgtggcggt cccgaaggcc
     2761 agcgccgcca ccgcctgcgc acccccgatc cggaagaccc gggtgacccc gctgagcgcg
     2821 caggcggcc
//
LOCUS       DASUYN010000648         2970 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1749048, whole genome shotgun sequence.
ACCESSION   DASUYN010000648 DASUYN010000000
VERSION     DASUYN010000648.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2970)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2970)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2970
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1749048"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..517
                     /locus_tag="VF061_12630"
     CDS             <1..517
                     /locus_tag="VF061_12630"
                     /inference="COORDINATES: protein motif:HMM:NF020442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FRG domain-containing protein"
                     /protein_id="HEX6670404.1"
                     /translation="AQHHGLPTRLLDWTYSPMVAAHFATVDDQCAGDRAVWRLDWKAV
                     HRHFRLPDRALLIQDLEGIFGQERSFTPWALFEPRTRERRFACMIEPPSLDARIATQA
                     ATFTLCSDNRRSFDSFLEENGLSAALTRFVIPAGEVSRLRDQLDLVSVDERRLFPDLD
                     GLAAYLRRYYS"
     gene            complement(508..912)
                     /locus_tag="VF061_12635"
     CDS             complement(508..912)
                     /locus_tag="VF061_12635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670405.1"
                     /translation="MFPRCLPFAVALALPLGAPPAAAQTAAPVAVAACDSDALCGRVP
                     RPVGLYIRAVEEDGRYLALEDGSLWEVEISDRALTAGWLPDDFVNLSWIAAPRGDFEY
                     LLTRAGYHGQKAAVRLAGRRPGPAGGEPLDQE"
     gene            complement(976..2520)
                     /locus_tag="VF061_12640"
     CDS             complement(976..2520)
                     /locus_tag="VF061_12640"
                     /inference="COORDINATES: protein motif:HMM:NF036516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670406.1"
                     /translation="MSARLTLVTLALLLWPAGGAAAQRSPLGYAIDLNDRADDAFKVT
                     AWVGGLTEANAVYQFAATAPGTYQVMDIGRFVRSFEAFDGAGRPVPVERVSVNQWKLS
                     DPARVRTLRYAVAETWDTPVDRHQVFLMCGTSMEQDHVLINPHAVIGYPSGMQARPIR
                     LRLAYPREWKVGTALERDGSGAYLADDFDHLVDSPILLGRLTEARTRVTGVPVEIYTY
                     SRTGKIESAQLLEAMDDMLQAAGGFLGKLPVNRYTFLYHFDERPAGAWEHSLSSTYVL
                     QESEFTDSVGRYVTDIAAHEFFHIVTPLNIHSEVIEHFNFVTPVPSQHLWLYEGTTEW
                     AAHAMQLRSGLKSIDEYLARVLQKMQIDRARFDSTWSLRELALTSYSDSGQAQYINIY
                     MRGALTAGLLDIRLLELSGGRRGLQDLIADLTRRFGKRRAFPEATFVDTLVAMTHPEI
                     RDFFDRYIWESERLPIAEYYGKLGIRLIQGPDGTPIRFEVDSAPAAAQKTLREAWLGR
                     KPRPAS"
     gene            2673..>2970
                     /locus_tag="VF061_12645"
     CDS             2673..>2970
                     /locus_tag="VF061_12645"
                     /inference="COORDINATES: protein motif:HMM:NF012686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670407.1"
                     /translation="MTGLDWTVVALYFALVLAAALLPGIRAGRKGRDASEYFLASRHT
                     GWLVVGASLFASNIGSEHLVGLAGTGAASGVAVGQFEVLASLILLLLGWVFVPFY"
BASE COUNT          426 a         1003 c         1064 g          477 t
ORIGIN      
        1 ggcccagcat cacgggctgc ccacccggct gctggactgg acctactccc ccatggtggc
       61 ggcgcacttc gccacggtgg acgaccagtg cgcgggcgac cgggcggtct ggcggctgga
      121 ctggaaggcg gtgcaccgcc atttccgcct gcccgaccgc gcgctgctga ttcaggatct
      181 cgagggcatc ttcggccagg agcggtcctt caccccgtgg gcgctgttcg agccgaggac
      241 ccgcgagcgc cggttcgcct gcatgatcga gccaccctcg ctggatgcgc gcatcgccac
      301 ccaagcggcg accttcacgc tctgctcgga caaccgacgc tccttcgact cgttcctgga
      361 ggagaacggg ctcagcgcgg cgctgacccg gttcgtgatc ccggccgggg aagtgagccg
      421 cctgcgcgac cagctcgatc tggtgagcgt ggacgagcgg cggctctttc ccgacctgga
      481 cggcctggcg gcctacctgc ggcgctacta ctcctgatcc agcggctccc cgccggcggg
      541 cccgggcctg cgtccggcga ggcggacggc ggccttctgc ccgtggtaac ccgcccgggt
      601 caggagatac tcgaagtcgc cccggggggc cgcgatccag ctcaggttca cgaaatcatc
      661 gggaagccag ccggcggtca gggcccggtc ggagatctcg acttcccaga gggacccgtc
      721 ctccagcgcc aggtaccgcc cgtcctcctc gacggcgcgg atgtagagcc cgaccgggcg
      781 ggggactcgg ccgcacaggg cgtcggaatc gcaggcggcg acggcgaccg gggcggcggt
      841 ctgggcggcg gcgggagggg cgcccagcgg cagggcaagg gcgacagcga agggcaggca
      901 gcgggggaac atagggtctc tcctcggtca gggatcctcc cgatactata cacccgattt
      961 tccgggtccg cccggtcagc tggccgggcg gggcttccgg cccagccagg cctcgcgcaa
     1021 ggtcttctgg gccgcagcgg gcgccgagtc cacctcgaac cgaatgggtg tgccatccgg
     1081 tccctggatc agccggatcc ccagcttgcc gtagtattcc gcgatcggca gtcgctccga
     1141 ctcccagatg tagcgatcga aaaagtcccg gatctccggg tgcgtcatgg ccacgagggt
     1201 gtccacgaac gtggcttcgg ggaacgcccg tcgcttcccg aaccgcctgg tcaggtcggc
     1261 gatcaggtcc tggagccccc ggcgcccgcc cgagagctcc agcaggcgga tgtccagcag
     1321 cccggccgtc agtgcgcccc gcatgtagat gttgatgtac tgcgcctgcc ccgagtcgct
     1381 gtacgacgtc agcgccagct cgcggagact ccaggtcgaa tcgaacctgg cccggtcgat
     1441 ctgcatcttc tggagcacgc gggccagata ctcgtcgatg ctcttgagcc ccgagcggag
     1501 ctgcatggcg tgcgccgccc actcggtggt gccctcgtac agccagagat gctgggaggg
     1561 caccggcgtc acgaagttga agtgctcgat cacctcgctg tggatgttca gcggggtgac
     1621 gatgtggaag aactcgtggg ccgcgatatc ggtgacgtac cggccgaccg agtcggtgaa
     1681 ctcgctctcc tggagcacgt acgtggagct gagggagtgc tcccaggcgc ccgccggccg
     1741 ctcgtcgaag tggtagagga aggtgtaccg gttcaccggc agcttcccga gaaagccgcc
     1801 ggcggcctgg agcatgtcgt ccatcgcctc gagcagctgg gcggactcga tcttaccggt
     1861 tcgggagtag gtgtagatct ccaccggcac gccggtgacg cgggtccgcg cctcggtgag
     1921 ccggccgagc aggatgggtg aatccaccag gtgatcgaag tcgtcggcca gataggcgcc
     1981 ggagccgtcg cgctcgagcg ccgtgcccac cttccactcc cgcgggtacg ccagccggag
     2041 ccggatgggc cgcgcctgca tgccgctcgg gtacccgatc accgcgtggg gattgatcag
     2101 gacgtggtcc tgctccatcg aggtgccgca catcaggaag acctggtgcc ggtccaccgg
     2161 cgtatcccag gtctccgcga cggcataccg cagggtgcgc actcgtgccg ggtcgctcag
     2221 cttccactgg ttgaccgaca cccgttcgac ggggaccggc cggcccgccc cgtcgaaggc
     2281 ctcgaagctc cgcacgaagc ggccgatgtc catgacctgg taggtccccg gcgccgtcgc
     2341 cgcgaactgg tacacggcgt tggcctcggt gagtccgccc acccaggcgg tgaccttgaa
     2401 ggcgtcatcg gcgcggtcgt tcaggtcgat cgcgtagccg agcggggacc gctgcgcggc
     2461 ggcgccgccg gccggccaga ggaggagagc gagggtgacg agcgtgagtc gcgccgacat
     2521 ggagcgtcca gttcgtgggt gcaggtgagg atgccgcctg ggggcggtcg tgtctaggag
     2581 acgcgcgggg cggagattcg gtttcatttc gtttcattgc gagcgctggc gtgggtctta
     2641 cgggacttcc tacattcacc gccgaggctt cgatgaccgg actcgactgg accgtggtcg
     2701 cgctctactt cgcgctggtg ctggccgccg ccctgctgcc cggcatccgc gcgggacgga
     2761 aagggcgcga cgccagcgag tacttcctgg ccagccggca caccgggtgg ctggtggtcg
     2821 gcgcctcgct cttcgcctcg aacatcggct cggagcacct ggtcggcctc gcgggcacgg
     2881 gcgcggccag cggcgtggcg gtggggcagt tcgaggtgct ggcctcgctg atcctcctgc
     2941 tgctgggctg ggtgttcgtg ccgttctacc
//
LOCUS       DASUYN010000649         3903 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_427964, whole genome shotgun sequence.
ACCESSION   DASUYN010000649 DASUYN010000000
VERSION     DASUYN010000649.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3903)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3903)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3903
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_427964"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..774)
                     /locus_tag="VF061_12650"
     CDS             complement(<1..774)
                     /locus_tag="VF061_12650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670408.1"
                     /translation="MPVRLVLPLLVACLPAVLSAQSAAEIDSAPASDPMVIRAIQLER
                     RDIFDPHERSWLARLANALHFETRAPTIRRELLFHVGEPYDSARVAESERNLRGLGVF
                     RKVQIDSVHTDTGVVMKVLTKDGWSTRADWRFRSAGGEVEFTIGMVEDNLLGTASSAS
                     VRYRKTPDRSTVALGFRRPRLFLGRVGLGLAYENRSDGRLNLVSLEQPFYALTSPFGF
                     RFDAEDRDERVLRFFEGARRAQDTLSRRYSLVRGSAAWAL"
     gene            complement(822..1613)
                     /locus_tag="VF061_12655"
     CDS             complement(822..1613)
                     /locus_tag="VF061_12655"
                     /inference="COORDINATES: protein motif:HMM:TIGR01458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01458 family HAD-type hydrolase"
                     /protein_id="HEX6670409.1"
                     /translation="MPGTIPPVAYLLDLDGTLYAAGAAVPGAPDTLERLRRGGVPFRL
                     VTNTTSRSRTLLVERLQGYGFRVRAEEIFTATLAGAALARAAGYRALAPFLPAPALED
                     LAGFDLVGGSSGRRGVPDAVVLGDLGEGWTYGALQEAFEYVMAGAALVALSRDRYWQR
                     GSVLALDAGPFVRALEYATGVEARVAGKPSAAFYTAALASLGLEPSAAAAMVGDDLWS
                     DVEGAQRAGLQGWLVRTGKFREDTLRDSGLTPDRVLPSVAALVPA"
     gene            1659..2360
                     /locus_tag="VF061_12660"
     CDS             1659..2360
                     /locus_tag="VF061_12660"
                     /inference="COORDINATES: protein motif:HMM:NF022750.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HEX6670410.1"
                     /translation="MPAATLLAHAALLAGLAQAPPYPFAVGESLQYEATLGYFPIGTA
                     SATVTGTTRERGADAFVFTAIGEGGPPGFRARYEMTSWTRSNQLASLRFHRRLTQGSK
                     VDEERYQIVPDSGRYRQEGAAQDWMTPRDALDELAYLYYLRTMPLKPGQSFTMSRYFK
                     TGYNPVQVRVTGREPLPMFDGRTVPCLTLELTARGSTMTVSLTDDERRLPVQLTLPLP
                     YGSVLLTLSGVSSPG"
     gene            complement(2357..3757)
                     /gene="glnA"
                     /locus_tag="VF061_12665"
     CDS             complement(2357..3757)
                     /gene="glnA"
                     /locus_tag="VF061_12665"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HEX6670411.1"
                     /translation="MAPAKPRPSGNGDRPSLEGFPADLTSAGKDDVLALTRRFGVDFL
                     RLQFTDILGINKNVEVPGSQFEKALDGEIMFDGSSIEGFVRIEESDMLLKPDLHTFRI
                     LPYDDEGGRVARLLCDIYTPDDEPFEGCPRTTLKRQVERARKLGFAMMAGCEAEFFLF
                     EKAGDGSPSTITHDTGSYFDLGPLDKGEEIRRVIVEQLVEMGFEVEAAHHEVADGQHE
                     IDLRYADALTTADNLTTFKFVVRNVANRYGYVASFMPKPIEGVNGSGMHTHQSLFRGR
                     ENAFSEPKGPHGLSKVALSYIEGLLQHARGFCAVTNPLINSYKRLVPGYEAPVNVAWS
                     MRNRSPLVRIPERRGLGTRCELRMPDPACNPYLALTVQLAAGLDGIERKLQAREPVNR
                     NIFTMSFRDRRKYRIDELPRDLHEALEMFEKDAVVKQALGEHLTQRFLEAKRNEIAEY
                     NRQVSRWEIEKYLGRY"
BASE COUNT          582 a         1387 c         1369 g          565 t
ORIGIN      
        1 cagcgcccac gcggccgacc cgcgcaccag cgagtagcgg cgggagaggg tgtcctgggc
       61 ccggcgggcg ccctcgaaga agcgcagcac gcgctcgtcg cgatcctccg cgtcgaagcg
      121 gaacccgaac ggcgaggtga gcgcgtagaa gggctgctcc agcgagacca ggttgagccg
      181 cccgtcggag cgattctcgt acgccagtcc cagaccgacc cgccccagga agagccgcgg
      241 gcgccggaag ccgagcgcga ccgtcgagcg gtccggggtc ttgcggtagc ggaccgacgc
      301 ggacgaggcg gtgccgagca ggttgtcctc caccatgccg atggtgaact cgacctcgcc
      361 gccggcgctg cggaagcgcc agtcggcgcg ggtgctccag ccgtccttgg tgagcacctt
      421 catcaccacg ccggtgtcgg tgtggaccga gtcgatctgc accttgcgga agacgccgag
      481 cccgcgaagg ttgcgctccg attcagcgac ccgggcggag tcgtacggct ccccgacgtg
      541 gaacaggagc tcacggcgga tggtgggcgc gcgggtctcg aagtgcaggg cgttggccag
      601 ccgggccagc cagctccgct cgtggggatc gaagatgtcg cgccgctcga gctggatggc
      661 gcggatcacc atggggtcgg acgccggcgc cgagtcgatc tcggcggcgc tctgggcgga
      721 gagaacggcg ggaagacagg cgacgagcag cggcaggacc agccggaccg gcaacctcac
      781 tccagaggga cagaggcgcg aaagataact ggccatccgg ctcacgcagg gacgagcgcg
      841 gccacgctcg gcagcacccg gtcgggggtg aggcccgagt cgcgcagcgt gtcctcccgg
      901 aacttgcccg tgcgcaccag ccagccctgg agccccgcgc gctgggcgcc ttccacgtcg
      961 gaccagaggt cgtccccgac catcgccgcc gccgcggagg gctcgaggcc gaggctcgcg
     1021 agcgcggcgg tgtagaaggc ggcgctgggc ttgccggcga cacgggcttc cacgccggtg
     1081 gcgtactcca gcgcccgcac gaaggggccc gcgtccagcg ccaggacgct cccccgctgc
     1141 cagtaacggt cgcgcgacag cgccacgagg gcggcgccgg ccatcacgta ctcgaaggcc
     1201 tcctggaggg ccccgtaggt ccacccctcg ccgaggtcgc ccaggaccac ggcgtccggc
     1261 accccccggc ggccgctgct gccgccaacg aggtcgaatc cggcgaggtc ttccagggcc
     1321 ggcgccggga ggaacggggc cagggcccgg tagcccgccg cgcgggcgag ggcggccccg
     1381 gccagggtcg ccgtgaagat ctcctcggcc cgcacccgga agccgtaccc ctggagccgc
     1441 tccaccagca gggtccggga gcggctggtc gtattggtga cgagccggaa gggtactccg
     1501 ccgcggcgca ggcgctccag cgtgtccggc gcccccggca cggccgcgcc cgcggcatac
     1561 agggtgccgt ccagatccag caggtacgcg acggggggga tggttccggg catctggctt
     1621 atattcctcc tctcacctgc acaccgccgg atcggaccat gcccgctgcc actctgctcg
     1681 cccacgccgc tctgctcgcc ggcctcgccc aggccccgcc gtaccccttt gccgtgggcg
     1741 agtcgctcca gtacgaggcc accctgggat acttcccgat cgggaccgcg agcgccaccg
     1801 tcaccggtac gacccgggag cgaggggcgg atgccttcgt cttcaccgcg atcggcgagg
     1861 gcggcccgcc cggcttccgg gcccggtacg agatgacctc ctggacgcgg tcgaaccagc
     1921 tcgcctcgct gcggttccac cgccggctga cgcagggcag caaggtggac gaggagcgct
     1981 accagatcgt gccggattcg ggacggtacc gccaggaggg cgcggcccag gactggatga
     2041 ccccgcggga cgcgctggac gagctggcct atctttacta cctgcgcacc atgccgctga
     2101 agccgggcca gagcttcacg atgtcccgct acttcaagac cggctacaac ccggtccagg
     2161 tccgggtcac cggccgcgag ccgctgccga tgttcgacgg ccggacggtg ccctgtctca
     2221 ccctcgagct gacggcgcgc ggctccacca tgacggtgag cctgaccgac gacgagcgac
     2281 ggctcccggt ccagctcacg ctgccgctgc cctacggcag cgtgctgctg accctcagcg
     2341 gggtctcgag cccgggctag tatcgcccca ggtacttctc gatctcccac cggctcacct
     2401 gccggttgta ttccgcgatc tcgttccgct tcgcctccag gaagcgctgg gtgagatgct
     2461 cccccagcgc ctgcttcacc accgcgtcct tctcgaacat ctccagcgcc tcgtgcaggt
     2521 cgcggggcag ctcgtcgatc cggtacttgc gccggtcgcg gaagctcatg gtgaagatgt
     2581 tccggttcac cggctcccgt gcctgcagct tccgctcgat gccgtcgagg cccgccgcga
     2641 gctgcaccgt cagcgcgagg tagggattgc aggcgggatc cggcatccgc agctcgcagc
     2701 gggtgccgag gccccggcgc tcggggatcc ggaccagcgg ggagcggttc cgcatcgacc
     2761 aggcgacatt gaccggcgcc tcgtatcccg gcaccagccg cttgtagctg ttgatcagcg
     2821 gattggtcac ggcacagaac ccccgcgcgt gctgcagcag tccctcgatg tagctgaggg
     2881 cgaccttgga cagtccgtgc ggccccttcg gttcgctgaa ggcgttctcc cgtccccgga
     2941 agagggactg gtgggtgtgc atgccgctcc cgttcacgcc ctcgatcggc ttgggcatga
     3001 aggacgcgac gtacccgtag cggttggcca cgttccggac cacgaacttg aaggtggtga
     3061 ggttgtcggc ggtggtgagg gcgtcggcgt accgcaggtc gatctcgtgc tgcccgtcgg
     3121 ccacctcgtg gtgcgcggcc tccacctcga atcccatctc caccagctgc tcgacgatga
     3181 cccggcggat ctcctccccc ttgtccagcg ggccgaggtc gaagtacgag ccggtgtcgt
     3241 gggtgatcgt ggacgggctg ccgtcgcccg ccttctcgaa caggaagaac tccgcctcgc
     3301 atcccgccat catggcgaag cccagcttgc gtgcccgctc cacctggcgc ttgagcgtgg
     3361 tgcggggaca cccctcgaac ggctcgtcgt ccggggtgta gatgtcgcag aggaggcggg
     3421 ccacccggcc accctcgtcg tcgtacggca ggatgcggaa ggtgtggagg tccggcttga
     3481 ggagcatgtc cgactcctcg atccgcacga agccctcgat ggaggagccg tcgaacatga
     3541 tctcgccgtc cagcgccttc tcgaactgac tcccaggcac ctcgacgttc ttgttgatcc
     3601 ccaggatgtc ggtgaactgg agccgcagga agtccacccc gaatcgccgg gtgagggcca
     3661 gcacgtcgtc cttccccgcg ctcgtcaggt cggcggggaa tccttccaga ctcggccggt
     3721 cgccgttgcc ggacggccgg ggtttggcag gcgccatggg atcgtgcccc gcgatggaga
     3781 gtgagggaga gcgggcggcc ggcccgtcgg acaagggtaa acggtaaacg gtaaccgtgc
     3841 cggcggaagg gacgccaccg cggagtgctc ggccatgcgg cctacccacc cgcatccggc
     3901 gag
//
LOCUS       DASUYN010000650         2443 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_864549, whole genome shotgun sequence.
ACCESSION   DASUYN010000650 DASUYN010000000
VERSION     DASUYN010000650.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2443)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2443)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2443
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_864549"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            108..680
                     /locus_tag="VF061_12670"
     CDS             108..680
                     /locus_tag="VF061_12670"
                     /inference="COORDINATES: protein motif:HMM:NF014669.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin transporter BioY"
                     /protein_id="HEX6670412.1"
                     /translation="MGDGRRVGALAPTDRWLSGRRAFAVGAAALVVAAAAQVTVPVPL
                     SPVPMTLQPLAVLVVAGVLGARLGAAALLLYLALGLLGLPVFAGGSGGLLHVLGPTGG
                     YLLAFPASAAVAGRIVGEAPALGRVLLGCALAMVVIHAGGTAQLAVLGGDAGTAFRVG
                     FVPFLTGDLLKIGIAAAVILGLGPKLRTLL"
     gene            692..1558
                     /locus_tag="VF061_12675"
     CDS             692..1558
                     /locus_tag="VF061_12675"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II CAAX endopeptidase family protein"
                     /protein_id="HEX6670413.1"
                     /translation="MADRYSPLKAIGWSIAFVVLVLVLTGLLAFGLALVVAGSADGAV
                     AWLGTTGPGPVLLQGLAMILASALFTWLIGVRVFRLTLQDLRYRVSHRGAGFGVGALV
                     GALAAGTGLAVAALAGGAEWTRDAGTAGDYVGTVATTLLILAPAALAEEMIFRGVPLL
                     ILAAALGRGSAVVLIAVAFALVHLQNPNVTALAIGNIALAGVFLGLAFYAPGGIWTAW
                     GAHLGWNGALAALDAPVSGVPFRIPFIDYEPGAPAWLTGGAFGPEGGLSSTLALTIAV
                     LVARRWAGKDRT"
     gene            1555..2397
                     /locus_tag="VF061_12680"
     CDS             1555..2397
                     /locus_tag="VF061_12680"
                     /EC_number="1.1.1.157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyryl-CoA dehydrogenase"
                     /protein_id="HEX6670414.1"
                     /translation="MTRAAVIGAGTMGNGIAHVLAQHGWEVALVDSAPDALDKATATI
                     RANLDRQVKKGTIAPEAPAQILGRVKTGTSLEGAAGAELVVEAASENPAVKFSIFEQL
                     DRIAPPAAILATNTSSISITEIAARTRRPEQVIGMHFMNPVPVMQLVEVIRGHATSDA
                     TTAKVMETARAMGKTPVEVHDYPGFVSNRVLLPMINEAIFCVMEGVATPEAIDTVMKL
                     GMAHPMGPLTLADFIGLDVCLAILEVLHKGLGDDKYRACPLLRRMVAAGHLGRKSGQG
                     FYKY"
BASE COUNT          297 a          892 c          880 g          374 t
ORIGIN      
        1 ctcaccacac tgctccacgc cctgcgcgac cgcggcgcct cgaccgggct ggccaccctt
       61 tgcctgggcg gcggcaatgc cgtggcgctc agcgtggaga tgctctgatg ggcgacggac
      121 ggcgggtcgg tgcgctggcg ccgacggatc ggtggctgtc cgggcgccga gcgttcgcgg
      181 tcggcgcggc cgcgctggtc gtggcggcgg cggcgcaggt gaccgtgccg gtgccgctga
      241 gcccggtgcc gatgacgctc cagccactcg cggtgctggt cgtagccggg gtgctcgggg
      301 cgcggctcgg ggcggcggcg ctgctgctgt atctggcgct gggcctgctc gggcttcccg
      361 tgttcgccgg cggcagcggc ggcctgctgc acgtcctcgg ccccaccggt ggttacctcc
      421 tggcctttcc cgcctcggcc gccgtcgcgg gacgcatagt cggtgaggcg ccggcgctcg
      481 gccgcgtgct gctcgggtgc gcgttggcga tggtcgtgat ccacgcgggc ggcaccgcgc
      541 agctcgcggt cctgggcgga gacgcgggca ccgcgttccg agtgggcttt gtcccgttcc
      601 tcaccggcga cctcctcaag atcggcattg ccgccgcggt gatcctgggc ctggggccga
      661 agctccgtac cctcctctga acggccctcg catggccgac cggtactccc ccctgaaggc
      721 gatcggatgg tcgatcgcct tcgtcgtact ggtcctcgtg ctgaccggac tgctggcgtt
      781 cggtctcgcc ctggtcgtcg ccgggtcggc ggacggtgcc gtcgcctggc tcggcaccac
      841 cggcccgggc cccgtgctcc tgcagggcct cgcgatgatc ctcgccagcg cgctcttcac
      901 ctggctcatc ggcgtgcggg tgttccggct gacgctccag gacctccgct accgggtgag
      961 ccaccggggc gcgggtttcg gagtcggggc cctcgtcggc gcgctggcgg cgggcactgg
     1021 gctcgccgtc gccgcgctcg ccggcggcgc cgagtggacg cgcgacgccg gcaccgccgg
     1081 ggactacgtc ggcacggtcg cgaccaccct gctgatcctc gcgcccgccg cgctcgccga
     1141 agagatgatc ttccggggcg tcccgctgct gatcctcgcg gccgccctcg gccggggcag
     1201 cgccgtcgtc ctcatcgcgg tggccttcgc cctggtccac ctccagaatc ccaacgtcac
     1261 cgcgctcgcc atcgggaaca tcgcgctggc cggcgtcttc ctggggctcg cgttctacgc
     1321 gcccggcggc atctggaccg cctggggcgc gcacctgggc tggaacggcg cgctggccgc
     1381 gctcgatgcg ccggtgagcg gcgtgccgtt ccgcattccc ttcatcgact acgagccggg
     1441 agccccggcg tggctgaccg gcggggcgtt cggccccgag gggggcctgt cctccaccct
     1501 cgcgctcacc atcgcggtcc tcgtcgcgag acgctgggcc ggaaaggacc ggacatgacc
     1561 cgagccgccg tgatcggcgc cggcaccatg ggaaacggca tcgcccacgt cctcgcgcag
     1621 cacggctggg aggtggccct ggtggacagc gcgcccgacg cgctggacaa ggccaccgcc
     1681 accatccgcg ccaacctcga ccggcaggtg aagaagggca ccatcgcccc cgaggcgccg
     1741 gcgcagatcc tgggacgggt gaagaccggg acgtcgctgg agggcgcggc gggcgcggag
     1801 ctggtggtgg aggccgccag cgagaacccc gcggtgaagt tttccatctt cgagcagctc
     1861 gaccgcatcg cgccgcccgc ggcgatcctg gccaccaaca ccagctcgat ctcgatcacc
     1921 gagatcgccg cgcgcacccg gcggccggag caggtgatcg ggatgcactt catgaatccg
     1981 gtgccggtga tgcaactggt ggaggtgatc cggggccacg cgacgagcga tgccacgacg
     2041 gcgaaggtca tggaaaccgc ccgcgcgatg ggaaagaccc cggtcgaagt ccacgactac
     2101 ccgggcttcg tctccaaccg ggtcctgctg ccgatgatca acgaggcgat cttctgcgtc
     2161 atggagggcg tcgccacgcc cgaggcgatc gacacggtga tgaagctcgg catggcgcac
     2221 cccatggggc cgctcacgct ggccgacttc atcggcctcg acgtgtgcct cgccatcctg
     2281 gaggtgctcc acaaggggct cggcgacgac aagtaccgcg cctgtccgct gctccgccgc
     2341 atggtcgcgg ccgggcatct cggccggaag tccggccagg gcttttacaa gtactgacgc
     2401 gccccggcca gccaatcatc gcgagcatgg aaaatcgctg gac
//
LOCUS       DASUYN010000651         2430 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1970999, whole genome shotgun sequence.
ACCESSION   DASUYN010000651 DASUYN010000000
VERSION     DASUYN010000651.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2430)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2430)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2430
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1970999"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1240)
                     /locus_tag="VF061_12685"
     CDS             complement(<1..1240)
                     /locus_tag="VF061_12685"
                     /inference="COORDINATES: protein motif:HMM:NF012722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HEX6670415.1"
                     /translation="MTTIRWRLTLWYTVALAVTVLAFGTALYLERKQSGIKELDQRLS
                     LEADLAHRWLTESYKVLGRIVTTSGSNPALDPGISAYLESLRDYLVVADSAGQVLALS
                     EVTRPLPADALERLAAPLDTTGFRRHIGTLPLGSPTGTVRYLAEPVHDAGPSISGLLV
                     ATPTRQAAFGPADLLRSMLLIAPVILLSAGLVGYWLAGTSLRPVQTIMDEVEAISDGR
                     SLHRRLAVPLSGDEMARLALTVNGMLARLEQSFASLHRFTADASHELKTPLMVLRAGV
                     ERALVHPGLPPEILQSLDETLAQINRMAEMVESLLTLARADEGRAPLAVEECDLRELV
                     ADVAETAGMLGESAGVTEVHTLPDTPVLLAVDRHRIREMLFNIVTNAIKYTPQGGTVS
                     ISLAQDDDAVTVSVRDTGIGI"
     gene            complement(1242..1910)
                     /locus_tag="VF061_12690"
     CDS             complement(1242..1910)
                     /locus_tag="VF061_12690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX6670416.1"
                     /translation="MKILVIEDDRTVGQYVKRGLEEQRYQADLVDDGMEGLRLASGGR
                     YDLIVLDLRLPGMSGFEVLRTLRDRGTTTPVLVLTAQDAVDFKVQALRSGADDYVTKP
                     FAFEELLARVEALGRRPKDIRDPVLRVGDLELDTATREVRRSGEPIELTPKEYTVLEY
                     LMRHAGRVMSRTLITEYAWDYHFDPGTNIVDVVINRLRKKVDSGHVQKLLHTVRGVGY
                     VVKA"
     gene            complement(1907..>2430)
                     /locus_tag="VF061_12695"
     CDS             complement(1907..>2430)
                     /locus_tag="VF061_12695"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX6670417.1"
                     /translation="IVDGLLDFSRPKGTAKAVVELNALVEETLFLLKHHRQFKRLTLV
                     RELAPALPRTLANAEQLIQVFMALMLNALDAMERGGTLTVRTGPSPERDDEVVVEVED
                     TGVGIARAEQDKIFEPFYTTKPPGRGTGLGLSICYGIVQDHRGRIEVDSAPGRGSVFR
                     VHLPVAGAEEPLP"
BASE COUNT          393 a          824 c          823 g          390 t
ORIGIN      
        1 cgatgccgat gccagtgtct cggactgaaa ccgtaaccgc gtcgtcatcc tgggccaggc
       61 tgatcgagac ggtgccgccc tgaggggtgt acttgatggc gttggtcacg atgttgaaca
      121 gcatctccct gatccggtgc cggtccaccg ccagcagtac cggagtgtcg ggcagtgtgt
      181 gcacctccgt cacaccggca ctctcgccga gcatacccgc ggtttccgcc acatcggcaa
      241 ccagctcgcg cagatcgcac tcttctacgg cgagcggcgc ccgcccttca tcggctcggg
      301 caagggtaag caggctctcg accatctcgg ccatccgatt gatctgagca agcgtctcat
      361 caagcgattg gaggatctcg ggtgggaggc cgggatgaac cagggcgcgc tcgacgcccg
      421 cgcgaagcac catcagaggc gtcttgagct cgtgactcgc gtcagcggta aagcggtgga
      481 ggctcgcgaa gctctgctcc agccgggcca gcatgccatt caccgtgagc gccagccgcg
      541 ccatctcgtc gcccgagagg ggaacggcca ggcgccggtg aaggctccgc ccgtcggaga
      601 tggcctccac ctcgtccatg atcgtctgta ccggccgcaa gctggtgccc gccagccaat
      661 aaccgaccag accggcactc agcagtatca ccggagcgat gagcagcatg gatcggagga
      721 gatcggcggg accgaacgcg gcttgccggg taggcgtggc cacgaggagc ccgctgatgc
      781 tcggcccggc atcgtggacc ggttcggcca ggtaccgcac cgttcccgtc ggcgacccca
      841 gcggcagggt gccgatgtgc cgtctgaacc cggtggtgtc gaggggggcc gcgagccgct
      901 cgagggcgtc ggcgggcagc gggcgggtga cctccgaaag cgcgaggacc tgacccgcac
      961 tgtcggcaac cacgaggtaa tctcggaggg actccaggta ggcgctgatg cccggatcga
     1021 gcgcgggatt cgagccgctg gtggtaacaa ttcggcccag gaccttgtag gactcggtaa
     1081 gccagcggtg ggctaaatcg gcctcgaggc tgaggcgctg gtccagttcc ttgatgccgg
     1141 attgcttgcg ctccaggtat aacgccgttc cgaacgccag caccgtcacc gcaagggcca
     1201 ccgtatacca gagggtgagc cgccagcgga tagtggtcat ctcaggcctt cacgacgtac
     1261 ccgacgcccc gcacggtgtg cagcagcttc tggacgtggc cggagtcgac cttcttgcgc
     1321 agacggttaa tcacgacgtc aacgatgttg gttcccgggt cgaagtgata gtcccaggcg
     1381 tattcggtga tgagggtccg ggacatcacc cgcccggcat gccgcatgag atactcgagg
     1441 acggtgtatt ccttgggggt cagctcgatc ggctcgccgg agcggcgcac ctcgcgggtg
     1501 gcggtgtcga gctccaggtc gcccacccgc agtaccgggt cgcggatgtc cttgggccgg
     1561 cggcccagcg cctcgacccg ggccaggagc tcctcgaagg cgaacggctt ggtgacgtag
     1621 tcgtcggcgc ccgagcgcag cgcctggacc ttgaagtcca ccgcgtcctg ggcggtgagc
     1681 accagcaccg gcgtcgtggt gccccggtcg cggagggtgc ggagcacctc gaagccgctc
     1741 atccccggga gccggaggtc gagcacgatc aggtcgtagc gcccccccga ggcgaggcgc
     1801 agtccctcca tcccgtcgtc caccaggtcc gcctggtaac gctgctcctc gagcccgcgc
     1861 ttgacgtact ggccgacggt gcgatcgtcc tcgatcacca ggatcttcac gggagcggct
     1921 cctcggcccc ggccaccgga aggtgcaccc ggaacaccga cccgcggccg ggcgcgctgt
     1981 ccacctcgat cctgccgcgg tgatcctgca cgatcccgta gcagatggag aggccgaggc
     2041 cggtgccgcg cccgggcggc ttggtggtgt agaagggctc gaagatcttg tcctgctccg
     2101 cccgcgcgat ccccacgccg gtgtcctcca cctcgaccac gacttcgtcg tcccgctcgg
     2161 ggctcggccc ggtgcggacg gtgagggtgc cgccccgctc catcgcgtcc agcgcgttga
     2221 gcatgagggc catgaagacc tggatcagct gctccgcgtt ggccagcgtc cggggcaacg
     2281 ccggcgccag ctcccggacc agagtgagcc gcttgaactg ccggtgatgc ttgagcagga
     2341 acagggtctc ctccaccagg gcgttgagct ccaccaccgc cttggccgtc cccttgggcc
     2401 ggctgaaatc gagcaacccg tccacgatcc
//
LOCUS       DASUYN010000652         2073 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_865337, whole genome shotgun sequence.
ACCESSION   DASUYN010000652 DASUYN010000000
VERSION     DASUYN010000652.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2073)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2073)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2073
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_865337"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1581
                     /locus_tag="VF061_12700"
     CDS             <1..1581
                     /locus_tag="VF061_12700"
                     /inference="COORDINATES: protein motif:HMM:NF015644.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0182 family protein"
                     /protein_id="HEX6670418.1"
                     /translation="DGDGEPVAPTRVTERLDGLAYGVTALAEERRTSEGPPAPPRVPA
                     LWSIEMIGHIASSDSHRVLAIDPAVLVVRGSPRATWLAVRVAPNGRASVAAVADDRTG
                     SAGQPLFYSGSDTMPGLNRGGLLELGPEAFRPDAPPYRLETADRRGVEVGGPWRRLML
                     AWALQAGSLLSDVATGAKVDWRLSPAERLASLAPFARWGEPVPRIVNRALVWVAHGYV
                     APRAFPLSARLPWREHDIGALHAGFLGTVEAATGITRIYLRPGANGPAAAWAAIAQGV
                     VEPASAIPEVVLRAAPYPVELFRVQARYLEEKRPQLGGLGGPPGSRRTELPATDAVWS
                     ADTSGPLRTAIYERSSERRVAAVLTGTSANGLDELRLLRLDSAGALASRSALENSWSH
                     FATYDALGDSIAADGGRLERGPVRLDLGAGGPVAYQSHFARDSRGNLSLSWVSVAAAG
                     DRLLGAGRSMREAWSNLLGATVPSIAGSAQATRLEEARRWLQRADSALRTGDWSGFGQ
                     AWNGLREALGVATDTAER"
     gene            1640..>2073
                     /locus_tag="VF061_12705"
     CDS             1640..>2073
                     /locus_tag="VF061_12705"
                     /EC_number="2.7.2.2"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="reversible synthesis of carbamate and ATP from
                     carbamoyl phosphate and ADP; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamate kinase"
                     /protein_id="HEX6670419.1"
                     /translation="MSTAVLALGGNALARADEPATITNQFRHARESMAAVVPLAREGW
                     RIVIVHGNGPQVGDSLVRNEVARRLVVPLPLGVLVAETAGWIGYMLQQTLQNALASAR
                     VSRQVVTVITQTLVDRFDPALGAPTKPIGQALTDAEAERLSQA"
BASE COUNT          256 a          732 c          824 g          261 t
ORIGIN      
        1 gacggcgacg gcgagcccgt ggccccgacc cgggtgacgg aacggctcga cggcctggcc
       61 tacggggtga cggccctcgc ggaggagcgc cggacctcgg aaggccctcc cgcgccgccc
      121 cgggtgccgg cactctggag catcgagatg atcggccaca tcgcgagctc ggactcgcac
      181 agggtcctcg cgatcgatcc ggcggtcctc gtggtgcggg gaagcccgcg ggccacctgg
      241 ctggcggtgc gcgtcgcgcc gaacggtcgc gcgtccgtcg ccgccgtggc cgacgaccgc
      301 accggcagcg cgggacagcc cctcttctac tccggcagtg acacgatgcc cggcctgaac
      361 cgcggtggcc tgctggagct gggcccggag gcgttccggc cggacgcccc cccgtaccgg
      421 ctggagaccg ccgatcgccg gggggtggag gtcgggggac catggcggcg gctgatgctg
      481 gcgtgggcgc tgcaggcggg gagcctgctg agcgacgtcg caaccggggc aaaggtggac
      541 tggcggctct cgccggcgga gcgactcgcg tcgctggcac cgttcgcgcg ctggggcgag
      601 ccggtccccc ggatcgtgaa ccgcgcgctc gtctgggtgg cccacgggta cgtggctccc
      661 cgggccttcc ccctgagcgc ccggctgccg tggcgcgagc acgacatcgg ggcgctgcac
      721 gccggcttcc tcggcacggt cgaggcggcg accggcatca cccggatcta tctgcgtccg
      781 ggcgccaacg ggccggcggc ggcgtgggcg gcgatcgcgc agggcgtggt ggagcccgcc
      841 tccgccatcc ccgaggtggt gctccgggcc gcgccctacc cggtcgagct cttccgggtg
      901 caggcgaggt acctggagga gaagcggccg cagctcggcg gcctcggggg gccaccgggg
      961 tcgcggcgca cggagctgcc ggcgaccgac gccgtgtgga gcgccgatac ctcgggcccg
     1021 ctgcgcacgg cgatctacga acggtcgagc gagcggcgcg tggcggccgt gctcaccggc
     1081 acgagcgcca acggcctgga cgagctcagg ctgctccgcc tcgattccgc cggcgccctc
     1141 gcgagccgga gcgcgctgga gaacagctgg agtcacttcg cgacctacga tgcgctgggc
     1201 gattccatcg cggcggacgg cgggagactg gagcgcggac cggtacggct cgacctcggt
     1261 gccggcggtc cggtggcgta ccagtcgcac ttcgcgcgcg attcgcgggg gaatctcagc
     1321 ctctcctggg tgagcgtggc cgcggccggc gaccggctgc tcggggcggg gcgctccatg
     1381 cgcgaggcgt ggagcaatct gctgggcgcg accgtgccgt cgatcgcggg cagcgcgcag
     1441 gccacccggc tggaggaagc cagacgctgg ctccagcgcg cggattccgc gctccgcacc
     1501 ggcgactgga gcggcttcgg ccaggcgtgg aacggcctgc gcgaggcgct cggcgtcgcc
     1561 accgataccg ccgaacggtg agcttgctcg cccccggagg caggactagc ttgcagcgcg
     1621 tttttggggg ggcgagcgca tgagcaccgc ggtcctggcg ctcgggggca acgcgctggc
     1681 ccgcgccgac gagccggcca cgatcaccaa ccagttccgc cacgcgcggg agagcatggc
     1741 ggcggtggtg ccgctcgcgc gcgagggctg gcggatcgtg atcgtacacg ggaacggccc
     1801 gcaggtgggg gactccctcg tccgcaacga ggtggcccgg cgcctggtgg tgccgttgcc
     1861 tctcggggtg ctggtcgcgg agaccgcggg ctggatcggc tacatgctgc agcagacgct
     1921 gcagaacgcg ctcgcctcgg cgcgggtgag ccgccaggtc gtcacggtga tcacgcagac
     1981 gctggtggac cgcttcgacc ccgcgctcgg tgcgccgacc aagccgatcg ggcaggcgct
     2041 gaccgacgcg gaggcggagc ggctcagcca ggc
//
LOCUS       DASUYN010000653         3449 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1530986, whole genome shotgun sequence.
ACCESSION   DASUYN010000653 DASUYN010000000
VERSION     DASUYN010000653.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3449)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3449)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3449
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1530986"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(279..1034)
                     /gene="tpiA"
                     /locus_tag="VF061_12710"
     CDS             complement(279..1034)
                     /gene="tpiA"
                     /locus_tag="VF061_12710"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF012349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004807 - triose-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HEX6670420.1"
                     /translation="MPTRTHIYAANWKMNHGPAAARDFLVRFLRVTANAPGRQLWFFP
                     PAVTIAAASEAAAGREDVTIGAQNVHWEPKGAFTGELSIPLVMEAGARATLIGHSERR
                     HLFGETDEQVARKLAAALKAGLRPLVCVGETLAEREGGRTEQVVARQVAVLHDRIGAA
                     DWERVTLAYEPVWAIGTGRNATPDDAAQVHELIRFELTRRGVARRVAILYGGSVNPGN
                     VLSLLARPELDGVLVGGASLDADGWAELVGLSA"
     gene            complement(1038..2228)
                     /locus_tag="VF061_12715"
     CDS             complement(1038..2228)
                     /locus_tag="VF061_12715"
                     /EC_number="2.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001036338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HEX6670421.1"
                     /translation="MKRTLESLDPAAIDGRRALVRVDFNCPIKDGKVGDNTRIRAALP
                     TIEYLRSRGARLVLLSHLGRPKGGPDPTYSMEPVVREVERVLGAPVTFLRDPLSEQAV
                     TETRRLPRGGVAIAENTRFFPGEESNDGALAARFAALGDFYVNDAFGSAHRAHASTEA
                     VARVLKPAVSGFLMQKELQYLGEALNRPKRPFVSVLGGAKISGKIDLISALLPKVDHI
                     LLGGAMACTFFAAMGLETGGSLIEPDRIELARQLLASSGEKLVVPVGGVVARELKAGA
                     ETRTVTRERIPEGWAVFDIDPRTEAEFASRIASAGTVVWNGPMGVFETPPFEHGTLAI
                     ARAMADATANGTVTVVGGGDSAAAVAQAGLEDRMTHVSTGGGASLEFLEGKTLPGVAA
                     LDEV"
     gene            complement(2225..3238)
                     /gene="gap"
                     /locus_tag="VF061_12720"
     CDS             complement(2225..3238)
                     /gene="gap"
                     /locus_tag="VF061_12720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0019682 - glyceraldehyde-3-phosphate
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HEX6670422.1"
                     /translation="MAIRIGINGFGRIGRNTLRAAKKLGLKDLDFVAVNDLTDTRTLA
                     HLLKFDSVHGRFPGEVQAEKEALVVDGDSMRVLSEKDPARLPWKDLGVDVVLESTGRF
                     TDRDSAALHLAGGAKKVIISAPAKKEDVTLVYGVNHQSYDPAKHHIISNASCTTNCLV
                     PVVKVILDRFGFVNGFMTTVHSYTNDQQILDLPHKDLRRARAAALSIIPTTTGAAKAT
                     SLVLPELKGKLDGVSLRVPTPDVSVVALTCTVAKATTAEEVNTAFRAAAAEGPLKGVL
                     AVSDEPLVSVDYIGSLQSSTVDALSTNVVAGTLVNVTSWYDNEMGYSARCVDLLRYVG
                     EQL"
BASE COUNT          491 a         1237 c         1193 g          528 t
ORIGIN      
        1 cccgacaggg tgatcccgcc gccgtcctcg ggctcggggc cggcgcggac caccagattc
       61 gccttgctgc cgtcgggcga ggcgaggcgc tcgatgcggc tctcgcctcc gtcgaggtag
      121 tcggcgacga agtccaccaa cgggagattg ctgagcctgc tggtcgtgtc gaaggcgacc
      181 agccgctcca gcagtgccgc atcggtcagg cgtgggactg ggatgctccg gtggggggac
      241 ctttcaacct accggcgggc caccagccgg gccagcactc aggcgctcag cccgacgagc
      301 tccgcccagc cgtcggcgtc gaggctcgcg cccccgacca gcacgccgtc gagctcgggc
      361 cgcgcgagca gcgagagcac gttgccgggg ttcacgctgc cgccgtagag gatggcgacc
      421 cggcgggcca ctccccgacg ggtcagctcg aagcggatca gctcgtgtac ctgcgccgcg
      481 tcgtcgggcg tggcgttgcg cccggtgccg atggcccaca ccggctcgta cgccaacgtc
      541 acccgttccc aatcggccgc tccgatccga tcgtgcaaga ccgcgacctg gcgggccacc
      601 acctgttcgg tgcgaccgcc ctcccgctcc gccaacgtct ctcccacgca gacgagcgga
      661 cgcaggcccg ctttcagcgc cgcggcgagc ttccgcgcca cttgctcgtc ggtttcgccg
      721 aagagatgcc gtcgctcgga gtgtccgatc agcgtcgccc gggcccccgc ctccatcacc
      781 agcggaatgg acagctcgcc ggtgaacgcg cccttcggtt cccagtgcac gttctgggcg
      841 ccgatcgtca cgtcctcccg tccggcggcg gcctccgacg cggcggcaat cgtgacggcc
      901 ggtgggaaga accacaactg ccgcccgggg gcgttcgccg tgacccggag aaagcggacg
      961 agaaagtccc gcgcggccgc cgggccgtgg ttcatcttcc agttggcggc gtagatgtgg
     1021 gtgcgcgtcg gcatggctca gacctcgtcg agtgccgcga cgccagggag cgtcttcccc
     1081 tccaggaact cgagcgacgc cccgccgccc gtcgagacgt gggtcatgcg gtcctcgagg
     1141 ccggcctgcg ccaccgccgc ggccgagtcg ccgccgccca ccacggtgac cgtgccgttc
     1201 gccgtggcgt ccgccatcgc ccgggcgatc gccagagtgc cgtgctcgaa cggcggcgtc
     1261 tcgaacacgc ccatcggtcc attccacacc acggtgcccg ccgaggcgat gcgggaggcg
     1321 aactcggcct cggtgcgcgg atcgatgtcg aacacggccc agccctccgg aatccgctct
     1381 cgggtcaccg ttcgggtctc ggctccggcc ttgagctccc gggcgacgac cccaccgacc
     1441 ggcacgacca gcttctcgcc cgagctcgcc agcagctgcc gggcgagctc gatccggtcg
     1501 ggctcgatca gcgagccgcc ggtctccagc cccatggcgg cgaagaacgt gcaggccatc
     1561 gccccaccca ggagaatgtg gtccaccttg ggcagcagcg cggagatcag gtcgatcttg
     1621 ccgctgatct tggcgccgcc cagcacggag acgaagggtc gcttcggccg gttcagggcc
     1681 tcgccgaggt actgcagctc cttctgcatg aggaagccgg agaccgccgg cttgagcact
     1741 cgcgccactg cctcggtgct ggcgtgcgcc cgatgggcgg agccgaacgc gtcgttcacg
     1801 tagaagtcgc ccagggcggc gaagcgcgcc gccagtgcgc catcgttgct ctcctccccc
     1861 gggaagaagc gggtgttctc ggcgatggcc accccgccac ggggcagccg tcgggtctcg
     1921 gtgacggcct gctccgagag gggatcccgc aggaacgtca ccggtgcgcc cagcacgcgc
     1981 tcgacctcgc gcaccaccgg ctccatggaa tacgtcgggt cggggccgcc cttgggccgg
     2041 ccgagatggg acaggaggac gaggcgggcg ccccggctcc ggagatactc gatcgtgggg
     2101 agcgccgccc ggatccgggt gttgtcgccg accttgccat ccttgatggg gcagttgaag
     2161 tccacccgga ccagcgcgcg cctgccgtcg atggcggcgg ggtcgagcga ctccagggta
     2221 cgcttcacag ctgctccccc acgtagcgca gcaggtccac acaccgtgcc gaatagccca
     2281 tctcgttgtc gtaccacgag gtcacgttga ccagggtgcc ggcgaccaca ttggtcgaga
     2341 gcgcgtccac cgtgctggac tggagcgagc cgatgtagtc caccgagacc agcggctcgt
     2401 cgctgacggc cagcaccccc ttgagcggtc cctcggcggc ggcggcgcgg aaggcggtgt
     2461 tgacctcctc ggcggtcgtg gccttcgcta ccgtgcaggt gagcgctacg accgacacgt
     2521 cgggcgtggg cacccggagc gacacgccgt cgagcttgcc cttgagctcg gggagcacca
     2581 gcgaggtcgc cttggcggct ccggtggtgg tcgggatgat ggagagcgcc gccgctcgcg
     2641 cgcggcgcag gtccttgtgc ggcaggtcga ggatctgctg gtcgttggtg tacgagtgca
     2701 ccgtcgtcat gaacccgttg acgaagccga agcggtccag gatgaccttg accaccggga
     2761 ccaggcagtt ggtggtgcag ctcgcgttgg agatgatgtg atgcttggcc gggtcgtagg
     2821 actggtggtt caccccgtag accagggtga cgtcctcttt cttggcgggc gccgagatga
     2881 tcaccttctt cgctccgccg gccaggtgga gcgccgccga gtcgcggtcg gtgaaccggc
     2941 cggtggactc cagcaccacg tccacgccga gatccttcca cggcagccgg gcgggatcct
     3001 tctcggaaag cacccgcatg gagtcgccat cgacgaccag cgcctccttt tccgcctgca
     3061 cctcgccggg aaagcggccg tggaccgaat cgaacttgag gaggtgcgcg agcgtcctgg
     3121 tgtcggtcag gtcgttgacg gcgacgaagt cgaggtcttt caacccgagc ttcttggccg
     3181 cgcgcagggt gttgcggccg atccggccga agccgttgat cccgatgcga attgccacgc
     3241 ttctcccccg gtgttgtagc tctcggttgg cggtctctgc tacgcgacgg gctccagtgc
     3301 ccgcgcgaag gtgaccccgt ccacactcgc cgcgcccgtc gccgccaggg cctccgcggc
     3361 cgatgcgagg gtcgcacccg tggtgaacac gtcgtccacc aggaccacgg ccagcccgcg
     3421 cgcgtcctcg gcgccgaacg cgccggcca
//
LOCUS       DASUYN010000654         2398 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_647341, whole genome shotgun sequence.
ACCESSION   DASUYN010000654 DASUYN010000000
VERSION     DASUYN010000654.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2398)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2398)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2398
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_647341"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(183..>2398)
                     /locus_tag="VF061_12725"
     CDS             complement(183..>2398)
                     /locus_tag="VF061_12725"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HEX6670423.1"
                     /translation="GKGSPTAEIPRLESAAVTIDGALDERAWAQATRLTGFWQYQPVD
                     GRPAEETTDVLVWYAPEAIYFGIVAHDRAPASIRATVADRDNIDNDDRVVIDIDTFHD
                     HRRAFFFGVNPLGAQSDGVRSEGAGQVSSLIPGSVDLNPDFTWESKGRVTDQGYQVEI
                     RIPFKSLRYPSGGPQRWGLNVTRVVQRTGYTDTWTDVRRANASFIGQEGAIGGLHDLK
                     RGVAVEAQPFVTATANGVRDDLTDRFDRESVDPDAGLNLRLGFTSYSLDATLNPDFSQ
                     VESDAGQVTVNERFALFFPEKRPFFLEGIELFGSPQTLVYTRRIVNPKAGAKFTGKFG
                     QLGVAHLTAVDETESGDAWFNVTRLRRDFGRSSIAGVTFTNRDADGLHNRVLAGDFRY
                     VWGLYYAQVQLGASHTSTGGDGRTAPIWQLEYDRTGRSWGFNYLVSGIGRGFDAQAGF
                     VNRLRSDVVNAHAFNRFTLYGARGAALENLTVFFGPEWTWLYDQFGFNRPLEGYEQMD
                     ATFQLRGGWELNGHLQRDFVNFQDSTYARYTVGSAGGPVYQPDDDFSGFTVQTGVTTP
                     TWQRLDARVTYRRGRAPIFEEAATGSAWLATAGLNARPASTIRLALTGTIFRLDRRDG
                     TEFARATIPRLQVEYQPNRALFFRAIGEYRSERRAALLDPVTGAPLLVEGAAQPATEF
                     NGFRIDLLASFEPTPGTVAFLGYGSSLETDAEFNWSRLRRRNDGLFVKLAYQISR"
BASE COUNT          343 a          776 c          921 g          358 t
ORIGIN      
        1 aaaacgggtg tggatcggcc gcccgaagcg cccgctcgcg gcgtcgtccg ccaccttttc
       61 gcggaggaag tcacggcggg gagcgtctcg ggttccgggg tcggcgggcg cggtgcggtc
      121 ggcgtcggtc acgcctcaaa cgtaatggcg gcggggagcc cgaccaacgg cgccggcgcg
      181 gctcagcggc tgatctggta tgcgagcttg acgaagaggc cgtcgttacg ccgccggagc
      241 cgggaccagt tgaactcggc gtcggtctcg agcgagctgc cgtagcccag gaacgcgacc
      301 gtccccgggg tcggctcgaa cgaggcgagg agatcgatgc ggaagccgtt gaactcggtg
      361 gcgggctggg ccgcgccctc caccagcagc ggcgcgccgg tgacggggtc cagcagcgcc
      421 gcccggcgct cggagcggta ctcgccgatg gcacggaaga agagcgcccg gttcggctgg
      481 tactccacct ggagccgggg aatcgtggcc cgggcgaact cggtgccgtc ccgccggtcg
      541 agccggaaga tcgtgccggt gagcgccaga cgaatggtcg aggccggacg cgcgttcagg
      601 ccggcggtgg cgagccaggc ggagccggtg gcggcctcct cgaagatcgg ggcccgcccc
      661 cggcggtagg tcacgcgggc gtcgagccgc tgccaggtgg gtgtggtcac gccggtctgc
      721 acggtgaagc cggagaagtc gtcgtccggc tggtagaccg ggccgccggc gctgcccacc
      781 gtgtagcggg cgtaggtcga gtcctggaag ttcacgaagt cccgctggag gtggccgttc
      841 agctcccacc cgccgcggag ctggaaggtg gcgtccatct gctcgtagcc ctcgagcgga
      901 cggttgaagc cgaactggtc gtagagccag gtccactcgg gaccgaagaa caccgtcagg
      961 ttctccagcg ccgcgccccg cgcgccgtag agggtgaagc ggttgaacgc gtgcgcgttc
     1021 accacgtcgc tcctgagccg gttcacgaat ccggcctggg cgtcgaagcc gcggccgatc
     1081 ccgctcacca ggtagttgaa gccccaggag cggccggtgc ggtcgtattc gagctgccag
     1141 atcggggccg tgcggccgtc gccgccggta ctggtgtgag aggcgcccag ctggacctgg
     1201 gcgtaataga gcccccacac gtagcggaag tcgccggcga gcacgcgatt gtgcagcccg
     1261 tcggcgtcgc ggttggtgaa ggtcacgccg gcgatcgaac tgcggccgaa gtcgcggcgg
     1321 agccgggtga cgttgaacca ggcgtcgccc gattcggtct cgtccaccgc cgtgagatgg
     1381 gcgacgccaa gctgcccgaa cttcccggtg aacttggcgc cggccttggg gttcacgatg
     1441 cggcgggtgt acaccagcgt ctggggcgag ccgaacagct cgatcccctc gaggaagaac
     1501 ggccgtttct cggggaagaa gagggcgaag cgctcgttca ccgtcacctg ccccgcgtcg
     1561 ctctccacct ggctgaagtc ggggttcagc gtcgcgtcga gcgagtagct ggtgaagccg
     1621 agccggaggt tgaggccggc gtccgggtcc acgctctcgc ggtcgaagcg gtcggtgagg
     1681 tcgtcgcgga cgccgttggc ggtggcggta acgaagggct gcgcctcgac cgccaccccg
     1741 cgcttcaggt cgtgcagccc gccgatggcg ccctcctggc cgatgaagct ggcgttggcg
     1801 cggcgcacgt cggtccaggt gtcggtgtac ccggtgcgct gcaccacccg ggtcacgttg
     1861 aggccccagc gctgcggccc gccggagggg tagcgcaggc tcttgaaggg gatgcggatc
     1921 tcgacctggt agccctggtc ggtgacccgg cccttggact cccaggtgaa gtcgggattg
     1981 aggtctacgc tgccggggat caggctcgaa acctgcccgg cgccctcgct ccggaccccg
     2041 tcgctctggg cgccgagcgg gttcacgccg aagaagaagg cgcggcggtg gtcgtgaaag
     2101 gtgtcgatat cgatgacgac gcggtcgtcg ttgtcgatgt tgtcgcggtc ggccacggtg
     2161 gcgcggatcg aggcgggggc ccggtcgtgg gcgacgatgc cgaagtagat cgcctcgggc
     2221 gcgtaccaga cgaggacgtc ggtggtctcc tccgcggggc ggccatcgac cggctggtac
     2281 tgccagaagc cagtgaggcg ggtcgcctgg gcccaggcgc gctcgtccag cgcgccgtcg
     2341 atcgtcaccg cggcggactc caaccgcggg atctccgccg tgggggagcc cttcccct
//
LOCUS       DASUYN010000655         2261 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1751085, whole genome shotgun sequence.
ACCESSION   DASUYN010000655 DASUYN010000000
VERSION     DASUYN010000655.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2261)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2261)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2261
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1751085"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..201
                     /locus_tag="VF061_12730"
     CDS             <1..201
                     /locus_tag="VF061_12730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670424.1"
                     /translation="ADGTVAPALGARLIFNDRLDAVVAVAFMLVTLLVVAASAREWVL
                     VLTRRKPARVQESPFVETAYVG"
     gene            191..403
                     /locus_tag="VF061_12735"
     CDS             191..403
                     /locus_tag="VF061_12735"
                     /inference="COORDINATES: protein motif:HMM:NF016234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbdD/YjiX family protein"
                     /protein_id="HEX6670425.1"
                     /translation="MWDREAAAGRWRERARAAIGAMRRVAGMPDYAAHLEHLRRCHPG
                     HALPTERGYFEQYVAARYGDGPTRCC"
     gene            complement(373..1293)
                     /locus_tag="VF061_12740"
     CDS             complement(373..1293)
                     /locus_tag="VF061_12740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670426.1"
                     /translation="MTRVWTAAVLLLIVTTASATRAAAQVLLRVGDSTRATYSEIHEA
                     LRAGTPAADSALGILREQRPAHLWRRAQAAIRGDAPWNDAPLALTRLAELRDRAYADS
                     AARLRERIEAREVTAPPGQDPADLLAPLRAVHLERERAARGDAAVLNELLALVPARRY
                     GVGDAWVLGRLGRAASDSLQARFLGAADPELKVRYLTLLSFSADPSAIPLLARVYAAP
                     DSFGVPPRYGSRASDALLWIGTRSSLAALLDARDQARARGVYAGPELSRGGYDFLAND
                     SSAVISRTGKWLTEWVAELPAQQQRVGPSP"
     gene            complement(1290..>2261)
                     /locus_tag="VF061_12745"
     CDS             complement(1290..>2261)
                     /locus_tag="VF061_12745"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX6670427.1"
                     /translation="DRPGWRAPLILVGYATAVLVRPLVAVASAAWQVVGFRVVDRVGK
                     GLRTPARDAWIAGITPAPLRGRAFGFHRAADHFGAVLGSLVAWLLLEQGFAVRDVIGW
                     SVAPGLLACLVLAPLLRRTDPGTLPAGADSAAGRADATGRVFWGPVLLLAALSFLRLP
                     EALLLLRLQDLGVLVAVIPLVWAGLHVVRSASSYPGGWLADHLGPRTAVAAGGLLFAT
                     VAVALGGRLTPAAAVGVFLLLGLVAGLTEAAERALVARLAPVRTGRGFGSYHALIGGA
                     ALPAGLAFGALYQRLGGPRALWASAAGMVLAVILWLIVTSPRVRKTG"
BASE COUNT          329 a          855 c          841 g          236 t
ORIGIN      
        1 gccgacggga cggtcgcccc ggcgctgggt gcccgcctca tcttcaacga ccggctggac
       61 gcggtggtcg cggtcgcctt catgctggtg accctgctgg tggtggcggc gtcggcccgc
      121 gaatgggtgc tggtgctgac cagacgcaag cccgcgcgag tgcaggagag tccgttcgtg
      181 gagacggcct atgtgggata gggaggcggc ggccgggcgc tggcgggaac gcgcgcgggc
      241 cgcgatcggc gcgatgcgcc gcgtggcggg catgcccgac tacgcggcgc acctggagca
      301 cctccgccgc tgccaccccg ggcacgcgct gccgaccgag cgcgggtact tcgagcagta
      361 cgtcgccgcc cgctacggcg acggtcccac ccgctgctgc tgagccggca gctccgccac
      421 ccattccgtc agccatttcc ccgtccgtga gatcacggcc gagctgtcgt tggccaggaa
      481 gtcgtagcct ccccggctga gctcggggcc ggcgtagacg cccctcgcgc gggcctggtc
      541 tcgggcgtcg aggagcgccg ccaggctgga ccgggtgccg atccagagca gcgcatccga
      601 ggctctcgag ccgtaacgcg gcggcacgcc gaagctgtcg ggcgcggcat acacccgggc
      661 caggagcggg atcgcggagg ggtccgccga gaaggagagc agggtcaggt aacggacctt
      721 gagctccgga tccgccgcgc cgaggaagcg tgcctggagc gagtcggacg cggcgcgtcc
      781 cagccggccg agcacccagg cgtcgcccac accgtagcgg cgggcaggaa cgagagcgag
      841 cagctcgttc aggacggccg cgtccccccg cgcggcgcgc tcgcgctcca ggtggaccgc
      901 gcgcagcggg gcgagcaggt cggcggggtc ctggcctggc ggcgccgtca cctcgcgggc
      961 ctcgattcgc tcgcgcagcc gcgccgcgct gtcggcatag gcccgatcgc gcagctccgc
     1021 gaggcgggtg agcgccagcg gcgcgtcgtt ccacggcgcg tcgccccgga tcgccgcctg
     1081 ggcccggcgc cagaggtggg ccggacgctg ctcccggaga atcccgaggg cggaatccgc
     1141 cgccggcgtg cccgcgcgaa gggcctcgtg gatctcggag tacgtcgccc gcgtcgagtc
     1201 accgacgcgg aggagcacct gcgccgccgc gcgggtcgcg ctcgcggtgg tgacgatgag
     1261 aaggagaaca gccgcggtcc acaccctggt catccggtct tcctcactct gggactggtg
     1321 acgatcagcc agaggatcac tgcgaggacc atgcccgccg cggacgccca cagggcgcgg
     1381 ggtcccccga gcctctggta cagcgcgccg aacgccagcc ccgccggcag ggcagccccg
     1441 ccgatcagcg cgtgatagct tccgaacccc cgtcccgtcc gcaccggggc gagccgtgcc
     1501 accagggcgc gttccgccgc ctcggtgagc ccggcgacga gccccagcag caggaagacg
     1561 cccaccgcgg cggccggcgt caatctccca cccagcgcga cggcgacggt ggcgaacagc
     1621 agtccacccg ccgccaccgc cgtgcggggc ccgaggtgat ccgcgagcca cccgcccggg
     1681 taggagctcg cgcttcgcac cacatggagc cccgcccaca ccaggggaat gacggcgacc
     1741 agcacgccga gatcctgcag cctcagcagg agcagcgctt ccggcaggcg gaggaagctg
     1801 agcgcggcca gcaggagcac gggcccccag aacaccctgc cggtggcgtc cgcccggccc
     1861 gccgccgaat ccgcgccggc cggaagcgtc cccgggtcgg tgcgccggag cagcggcgcc
     1921 agcacgaggc aggcgagcag acccggcgcc acgctccatc cgatcacgtc ccgcacggcg
     1981 aacccctgct ccagcagcag ccaggcgacg agcgagccga gcaccgcgcc gaagtggtcc
     2041 gcggcccggt ggaagccgaa ggcgcggccg cgaagcgggg ccggggtgat gcccgcgatc
     2101 caggcgtcgc gagccggcgt gcgcagcccc ttccccacgc gatcgacgac ccggaagccc
     2161 accacctgcc acgccgcgct cgcgacggca acaagcgggc gcaccagcac ggcggtggcg
     2221 tagccgacga ggatgagcgg cgctcgccag cccggccggt c
//
LOCUS       DASUYN010000656         2657 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1751255, whole genome shotgun sequence.
ACCESSION   DASUYN010000656 DASUYN010000000
VERSION     DASUYN010000656.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2657)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2657)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2657
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1751255"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..774
                     /locus_tag="VF061_12750"
     CDS             <1..774
                     /locus_tag="VF061_12750"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX6670428.1"
                     /translation="EAERLRTTLLSSLSHDLRTPLAAIEGAGTTLLQDGGPGDPEARQ
                     ELASTIVQESHRMSRLVANLLDMIRVETGALQVQREWQPLSDVAGVALIRMEEQLQGR
                     RVTTHFPVSLPLVSVDEVLLEQVFVNLLENAARHTPPGTPIDLGAEERDGEVTVSVAD
                     RGPGVPAGEEERVFEKFQRVGSTPGTGVGLGLTICRGIVRAHGGRIWVERRPGGGALF
                     RFTLPIVGTPPTLEPEPSEPEPELKPAAPWTIPPRSSSS"
     gene            789..1439
                     /locus_tag="VF061_12755"
     CDS             789..1439
                     /locus_tag="VF061_12755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HEX6670429.1"
                     /translation="MRRFLRAALGAQAYRLAEATTARDGLGEAVSRNPDLILLDLGLP
                     DRDGLEVARELREWSATPIIVLSARGRERDKVAALDLGADDYLTKPFGVEELLARIRV
                     ALRHAPHPSGSASEPVFEADSLRVDLGRREVWREGRQVHLTPTEYKLLTLMIRHAGKV
                     LTHRQILKEVWGASYAGQSHYVRVYMAQLRQKLEDDPSRPRLLITEPGVGYRLRPE"
     gene            complement(1458..>2657)
                     /locus_tag="VF061_12760"
     CDS             complement(1458..>2657)
                     /locus_tag="VF061_12760"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX6670430.1"
                     /translation="TERRRFEERLQQAQRMDAVGRLAGGVAHEVNNQMTVVLGASSFL
                     LRRSELPEWVRADVEQIRQAAQRSGAITGQLLAFGRRQLLQPEPVDLNGVVRGMDTLL
                     RRTLGAAISLELELEPGLERALVDPGQLTQALLNLALNARDAMPVGGVLRIRTANVEL
                     RSGNEVDGGAEAVPGAYVHLLVSDTGVGIDPAALGRIFEPFFTTKPFGQGTGLGLAMV
                     YGMVRQSEGYVTVTSVEGQGTTFAIYLPRQAVAAGAPSERPPAERGETTPGLSQRPVA
                     VVVEDEAAVRGLVARILVEEGFEVLEAGNGAEALDLVARAQLDGRLRLVVSDLAMPTM
                     GGRELGNRLREQGHRVPLLFITGYPEGDVERLGLLDADQEVLRKPFTPEVLAERARQL
                     AARPSPA"
BASE COUNT          387 a          954 c          948 g          368 t
ORIGIN      
        1 gaggccgagc gcctgcggac caccctgctg agctcgctgt cgcacgatct tcggactcca
       61 ctggccgcca tcgagggtgc gggcaccacg ctgctccagg acggcgggcc gggagacccc
      121 gaagcgcgcc aggagctcgc gagcaccatc gttcaggagt ctcatcgcat gagccgactg
      181 gtcgccaacc tgctcgacat gatccgggtg gagacgggcg cgctgcaggt gcagcgggag
      241 tggcagccgc tctccgacgt cgccggcgtg gcgctgatcc ggatggagga gcagctccag
      301 gggcggcgcg tcacgacgca cttcccggtc tcgctaccgc tggtctcggt ggacgaggtc
      361 ctgctggaac aggtcttcgt caacctgctg gagaacgcgg ccaggcatac ccctccgggg
      421 acgccgatcg acctcggggc cgaggagcgt gacggtgagg tgaccgtcag cgtcgccgac
      481 cggggcccgg gggtgccggc aggggaggag gagcgggtct tcgagaagtt ccagcgcgtc
      541 ggcagcacgc cgggcacagg cgtcggactg ggtctcacga tctgccgggg catcgtccgg
      601 gcgcacggcg gccgcatctg ggtggagcgc cgccccggtg gcggagcgct cttccgcttc
      661 acccttccga tcgtcggcac accccccacc ctcgaaccgg aaccctccga gcccgagccg
      721 gagctcaagc ccgctgcacc gtggacgatc ccaccccgct catcctcgtc gtagaggacg
      781 agccgcagat gcggcgtttt ctccgcgcgg cgctgggcgc tcaggcctac cgcctggcgg
      841 aggcgaccac cgcgcgcgac ggtctggggg aggccgtgag tcggaatccg gacctgatcc
      901 tgctggacct gggtctgccc gaccgggacg ggctggaggt cgcccgcgag ctgcgggagt
      961 ggtcagcgac cccgatcatc gtcctgtcgg cgcgcggccg ggagcgggac aaggtggctg
     1021 cactcgacct cggcgcggac gactacctca cgaagccgtt tggggtggag gagcttctgg
     1081 cgcggatccg ggtggcgctc cgtcatgcgc cccacccatc cggctctgcc tcggagccgg
     1141 tattcgaggc ggacagcctg cgggtggacc tggggcggcg cgaagtctgg cgtgagggtc
     1201 ggcaggttca cctcaccccc accgaataca agctgctgac gctgatgata cgccatgcgg
     1261 ggaaggtgct cacccaccgg caaatactga aagaggtgtg gggtgccagt tatgccggcc
     1321 aatcccacta cgtgcgggtg tacatggccc agctccggca gaagctggag gacgacccgt
     1381 cccgtccgcg gctcctgatc accgagccgg gcgtggggta tcggctccgg ccggagtgag
     1441 ggcgagggga ggcggcgcta ggccggagac ggccgagccg ccaactggcg ggcacgctcc
     1501 gccagcacct ccggcgtgaa cggcttccgc agaacctcct ggtccgcgtc cagcagcccg
     1561 agccgctcga cgtccccctc ggggtacccc gtgatgaaca gcagcggaac ccgatggccc
     1621 tgctcccgca ggcggttgcc cagctcccgc ccgcccatgg tcggcatcgc gaggtcgctg
     1681 accaccagcc gcagccgccc gtcgagctgg gcccgggcga ccagatcgag cgcctccgcc
     1741 ccgttgccgg cctcgagcac ctcgaacccc tcctccacga ggatcctcgc gaccaggccc
     1801 cggacagcgg cctcgtcttc cacgacgacc gcgacgggac gctgcgagag gcctggggtg
     1861 gtctcgcctc gctccgccgg aggccgttcc gagggagctc cggccgccac ggcctgacgg
     1921 ggcaggtaga tcgcgaacgt ggtcccctgc ccctccacgc tggtcacggt gacgtagccc
     1981 tcgctctgcc ggaccatgcc gtagaccatc gcgagtccga ggccggtgcc ctggccgaac
     2041 ggcttggtgg tgaagaaggg ctcgaagatg cggccgaggg cggcaggatc gatcccgacc
     2101 cccgtgtcgc tcaccagcag gtggacgtac gcgccgggca cggcctcggc accgccgtcc
     2161 acctcgttgc cggacctcag ctcgacgttc gcggtgcgga tccggaggac gccgccgacc
     2221 ggcatcgcgt cccgcgcatt gagcgcgagg ttcaggagcg cctgcgtgag ctgtcccgga
     2281 tccacgaggg cgcgctcgag gccgggctcg agctccagct ccaggctgat cgcggcgccc
     2341 agggtccgcc ggagcaaggt gtccatccct cgcaccacgc cattcagatc cacgggctcg
     2401 ggctggagca gctgacggcg cccgaaggcg agcagctggc cggtaatggc gccactgcgc
     2461 tgcgccgcct ggcggatctg ctccacgtcg gcgcggaccc actcggggag ctcggaccgc
     2521 cgcagcagga acgacgaggc tccgagcacc acggtcatct ggttgttgac ctcgtgggcg
     2581 acgccgccgg ccagtcggcc caccgcgtcc atccgctggg cctgctgcag ccgctcctcg
     2641 aaccggcggc gctcggt
//
LOCUS       DASUYN010000657         3856 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1751332, whole genome shotgun sequence.
ACCESSION   DASUYN010000657 DASUYN010000000
VERSION     DASUYN010000657.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3856)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3856)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3856
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1751332"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            723..>3856
                     /locus_tag="VF061_12765"
     CDS             723..>3856
                     /locus_tag="VF061_12765"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX6670431.1"
                     /translation="MLFVDLVDFTSRSDQADPEDVRAMLVPYDIRVKSEIESFGGLVE
                     KFIGDAVMAVFGAQVSHGDDAERAVRAGLRVLDAIQELNKENPALDLTVRAAVNTGVA
                     IVDARQQPDIAQGLAHGDVVNTASRLQTGAPPGRLVVGAETYWATRSVIGYEPLEPIQ
                     AKGKRKPLAAWLALEALTAPAERVASAAPMVGRDRELELLRRTWESVTTQRRPDLVTV
                     IGPPGIGKTRLTREFVGLVEPSGTRVLRGRSLPYGESSGYRAFRQQVKDVAGIFESDS
                     PADARAKLTAVVTELCGPTDGPEVADHLAVLIGLGGDTVADRQPLFFAARRFVEDLAS
                     RQPLLLVFEDIHWADTSQLDLLESLASRVRDVPVMFLALARPELLDSRPTWGAGLMSH
                     TSMQLYPLSSDEARTLAGHLLPMLSGLQGAADRVVITAEGNPLFIEELVASLTERVDE
                     ALEELPTNVRSTIAARLDTLPNAARGALLDAAVIGKVFWRGALQALDVTRSAAELEDA
                     LDMLESRDFIHRESGSQIQGDHEYLFKHMLIREVAYATLPRAARRERHAAVARFIESA
                     AGERIEEAAALLAHHWQEAGDVDQAVRFLQLAAEHAARGWAKDEAAALFGQALELVPE
                     NQPERRRAIAIRRAETQVELGDLGAAAALDKLLEETPGLERLKVLMAGAHTAHWAMDA
                     EGATRMSQEAFDLAQSLSIEEFIGPALALQSLASSMAGNMDTSLELGERALAKWIPGT
                     RRAERALCLDQMATGWYWTGEYERALEYGEQAISFAEEIKSSDSLLRTGSVHALTLTG
                     MGRHEEALPRFEEVIARGREFGLVPRMTARALNMSSALYRDLFQLDEATLRNQEAAEL
                     GAAAGFSNAVLQSGIDQLFTDLARGEVGRAEARWPELWDRTQNTKGTHQWLMAGRLAK
                     ARAEIALAKGDHAEAARLAQDAIDQSREVRRAKYELAARLVLGQALMALGQPERGIDE
                     LHTALDGIRRLGHPPTLWRAWWTLGTSLAQTGQDDEAAAAVEAAANTLRTFAATLAPE
                     RSGPLLVAEPSREIL"
BASE COUNT          616 a         1291 c         1361 g          588 t
ORIGIN      
        1 tacaccgagc aggggcagta ctacgacggc ggtgaccagg tgctccagcg cgagatcggc
       61 tgcggcgaac tgtacgacgc cctcggtgag gagttggcgt ccgcgcactg agcgcgaccg
      121 tggcggtccg acggccggcg aaaggctcgc ggatgctgga gactcactcg ccgggtgcgg
      181 tgcgcagtcc tgttcgaagt caccgttgag cgatcccctc tgagacggcg ccaccggcgc
      241 accaagcggc gacctaccgc tgcgagattg cggccacacc ctgcggttca cagcgccacg
      301 ccgcagcggg ctgggggaga gtcccagcga agggtcctcc tccggacgcc gcaatgcacc
      361 gctgagctgt tcccttgcag gacgaatgac gggggctttg tcgggatcga gcgatgagag
      421 atgtccacga ttcatcgcga ggtgcgctga gaggattggt gtccagtggc gaacgtccgg
      481 gtccgctcct atctttggac ctcctcgacg cgttttccca tcgggactgg ctgctggccg
      541 cccggatcgc gctcggctga ggcgagacct ccccgtgcga acgaagcgcc aaacgtagac
      601 tgcttctcgt gccccagtgt ctggcctgtg gggagcagaa tcccgagggg gcgcggttct
      661 gttcggcctg cggcacggca ctgactgtcg agccggccgt tgaagagcgc aaggttgtct
      721 cggtgctgtt cgtcgacctg gtcgacttca cctcgcgctc ggatcaggcc gaccccgagg
      781 acgtccgggc catgctggtg ccctacgaca tccgggtgaa gtctgaaatc gaatcgttcg
      841 gcggcctcgt ggagaaattc atcggcgacg cggtcatggc cgtgttcggc gcccaggttt
      901 ctcatggcga cgacgccgag cgcgccgtgc gggccggcct ccgggtgctc gacgcgatcc
      961 aggagctgaa caaggagaat ccggccctcg acctcaccgt gcgtgccgcg gtcaataccg
     1021 gcgttgccat cgtggacgcc cgccagcagc cggacatcgc gcaggggttg gcccacggcg
     1081 atgtggtgaa caccgcctcc cggctccaga cgggagcgcc gccgggaagg ctggtggtgg
     1141 gcgcggagac ctactgggcc acccggagcg tgatcggcta cgaacccctt gagccgatcc
     1201 aggccaaggg caaacgcaaa ccgctggcgg cctggctggc actggaggcg ctcactgcgc
     1261 ccgccgagcg cgttgcgtcg gccgcgccga tggtcggacg cgatcgcgag ctggagctcc
     1321 ttcgccgaac gtgggagagc gtgaccaccc agcgacgccc tgacctggtg accgtgatcg
     1381 ggcctccagg catcgggaag acccgcctga cccgcgagtt cgtcggtctg gtcgagccgt
     1441 ccgggacgcg agtgttgcgg ggacgatccc tcccctacgg cgagtcctct gggtaccgag
     1501 cgttcagaca gcaggtcaag gatgtggcgg ggatcttcga gagcgattcc ccggccgacg
     1561 cccgagcgaa gctgacggca gtcgtgaccg agctgtgcgg ccccaccgac ggccctgagg
     1621 ttgcggacca cctggccgtt ctgatcggcc tcggcggaga cacggtggct gatcgccaac
     1681 cgctgttctt cgcggcccgc aggttcgtgg aggatctggc gagccggcaa ccgctcctgc
     1741 tggtgttcga ggacatccac tgggccgaca ctagccagct ggacctcttg gagtccctgg
     1801 cctcccgggt ccgcgacgtc cctgtcatgt tcctggcctt ggcccgcccc gagctcctgg
     1861 actcccggcc gacctgggga gcggggctga tgtcgcacac ctcgatgcag ctgtatccgc
     1921 tgtcctctga tgaagcccgg acgctggccg gacatctcct gccgatgctc tccgggctgc
     1981 agggcgcggc cgaccgcgtg gtgatcacgg ccgagggcaa tccgctgttc atcgaggagc
     2041 tggtggcctc gctgaccgag cgagtggacg aggcgctcga ggagctcccg acgaacgtgc
     2101 ggtccacgat cgccgcccgg ctcgacacgc ttcccaatgc cgcccggggt gcgctactcg
     2161 acgccgcggt gatcggcaag gtcttctggc gcggagcgct tcaggcgctc gacgtaacca
     2221 ggtcggcggc cgagcttgag gacgccctgg acatgttgga gagccgcgac tttatccatc
     2281 gggagtcggg gagccagatc cagggcgacc acgaatatct gttcaaacac atgcttatcc
     2341 gggaggtggc ctacgccacg ctcccccggg cggcccgcag ggagcggcac gccgcggtag
     2401 cccggttcat cgagtcggcg gccggcgagc ggatcgagga ggctgccgcg ctgctggccc
     2461 accactggca ggaggccggt gacgtcgacc aggccgttcg gtttctccag ctcgccgccg
     2521 agcacgctgc cagaggatgg gcgaaggatg aggccgcggc gctgttcggc caagccctgg
     2581 agctcgtgcc agagaaccaa cccgagcgac gccgggccat cgctattcga cgggcggaga
     2641 cgcaggttga gctgggcgat ctcggtgccg cagccgccct cgacaagctc ctggaagaga
     2701 ccccgggctt ggagcgcctg aaggtgctga tggccggcgc ccataccgcg cattgggcca
     2761 tggacgctga gggcgcgacc cgaatgtcgc aggaggcatt tgacctggcc cagtccctgt
     2821 ccatcgagga gttcatcgga ccggcgctgg cgctacagag cctggcctcg agcatggccg
     2881 gcaacatgga cacgtccctc gagctgggcg agcgggccct ggcaaagtgg atccccggca
     2941 cccgtcgggc cgaacgcgcg ctgtgcctcg accagatggc cacgggctgg tactggaccg
     3001 gcgagtacga gcgggccctg gagtacgggg agcaggccat ttccttcgct gaggaaatca
     3061 agagctccga ctcgttgctc cgaacggggt ccgtccacgc gctcaccctg accggaatgg
     3121 gccggcacga ggaagccctc ccgaggttcg aggaggtcat cgcccgcgga cgtgagttcg
     3181 ggctggtgcc ccgaatgacg gctcgcgcgc tcaacatgtc cagcgcgctg taccgcgacc
     3241 tgttccaact cgacgaagca accctgcgca accaggaggc cgcggagctc ggtgcggcag
     3301 ccggcttctc caacgcggtg ctccaatccg ggatcgacca gctgttcacc gacctggccc
     3361 gcggcgaggt tggccgggcc gaggctcgat ggcccgagct gtgggaccga actcaaaaca
     3421 ccaagggaac gcaccagtgg ctcatggccg ggcgcctggc caaggcaaga gcagagatcg
     3481 ccctggcgaa aggggaccat gccgaagcgg cccggctggc ccaggacgcc atcgaccagt
     3541 cgcgcgaggt ccggcgggcc aagtacgagc tggccgcgcg cctcgtcctg gggcaggccc
     3601 tcatggctct gggccagccc gagcgtggga tcgacgagct ccacacagcg ctcgacggca
     3661 tccggcggct cggtcacccg ccgacgctgt ggcgagcatg gtggaccttg ggaactagcc
     3721 tcgctcagac gggccaggat gacgaggcgg ccgcggccgt ggaggcggcc gccaatacgc
     3781 tgcgcacctt cgccgccacc ttggccccgg agcggagcgg gccgctcctg gtggcggagc
     3841 cctcgcgaga gatcct
//
LOCUS       DASUYN010000658         5494 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1090007, whole genome shotgun sequence.
ACCESSION   DASUYN010000658 DASUYN010000000
VERSION     DASUYN010000658.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5494)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5494)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5494
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1090007"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(293..364)
                     /locus_tag="VF061_12770"
     tRNA            complement(293..364)
                     /locus_tag="VF061_12770"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(329..331),aa:Gln,seq:ctg)
     gene            complement(406..1641)
                     /locus_tag="VF061_12775"
     CDS             complement(406..1641)
                     /locus_tag="VF061_12775"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX6670432.1"
                     /translation="MTVDYLLIGGGMAAGNCAAELRKRDGDGSIMVVGREPEPPYERP
                     PLSKEYLRGEAERKDAYVNESGWYEQNGVQLRTKTNVMSLDPEARRVKLQGGDEVEFG
                     KALIATGANVNILRVEGAELEGIHYLRAFGNSDAIREDAEKAERVVLIGGSYIGCEVA
                     ASLTAKGTDCAIVMMEDVALSRTFGDDAGRWFQERMEEKGVEFNGGETLAAFEGDEGV
                     SAVVTESGKTVEGDFVVVGAGVRPDVMLAQRAGLEVADEAPGGIVCDSTLQTSVEGIY
                     AAGDVCSYDSVVHGRRLRVEHWDVAMQQGIHAARCMAGEPADYDVVPYFFSDLADWAS
                     LEYVGPAYEWDEDVWRGDRDAGEFSVFYLKDGKVAGTLAVGRSEDLGHARELLAEGVD
                     VSGKKEFLADQESDLGSLI"
     gene            complement(1658..2347)
                     /locus_tag="VF061_12780"
     CDS             complement(1658..2347)
                     /locus_tag="VF061_12780"
                     /inference="COORDINATES: protein motif:HMM:NF014325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrkA family potassium uptake protein"
                     /protein_id="HEX6670433.1"
                     /translation="MGDRKYMIIVGAGKVGWNLARELIEKGHEVTLIENNRDRYLTVE
                     QELEHSVQYGDASELWVLERAGISRADMVIAVTGDDEDNMLICQVAKEKYLVDRIIAR
                     VNNPRNRPHFELLGVKPYVSATDLILRVIEHEVPEYGLVHLLDLPEERLEIIEMLLAD
                     DSRVAGKRVGDLNMPEGTLLISVLRKGEGGFVPGPDTVLEAGDEVLAVLDPTVEEDLK
                     TFFGSDGEVGT"
     gene            complement(2347..2823)
                     /locus_tag="VF061_12785"
     CDS             complement(2347..2823)
                     /locus_tag="VF061_12785"
                     /inference="COORDINATES: protein motif:HMM:NF014325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrkA family potassium uptake protein"
                     /protein_id="HEX6670434.1"
                     /translation="MFVLIVGCGRVGSSVARSMLRQGHQVSCLDEDPEAHARLEVGLD
                     RSWEDSGGQFTVGTALETDALSAAGIERADAFVASTDGDNTNVVIAQIAKRRYNVPTV
                     VVRILDPLRAEWYEKQGLNTICPTRSAINMLEEELVAAAGGDGVRWEGGDPGDVPS"
     gene            complement(2920..4836)
                     /locus_tag="VF061_12790"
     CDS             complement(2920..4836)
                     /locus_tag="VF061_12790"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEX6670435.1"
                     /translation="MRAKQLLGVPFLYAVAASAVGFSIYFSIGVVADRGLGLTPLIFL
                     GAGVLFAITTLTYVEGGAMYRERGGSSTFARHAFNELVSFVAGWAILIDYVIVIAAAA
                     VSVPHYLTPIWGNLGSGWEERVVAAVVIALAAFINVTAVTGGSRANRLVVLALADLVL
                     QMLVIAVGVMVVFEPSALTAELDLFTTPSFEDIVYAAVVATIAYAGIEAASDLAPDLD
                     FEEGELRRIASAGAVIVPLLYAGMAAIALMAVPVVPGPDGPETALSGALVEAPVLGVV
                     QSFEPAWVADVMQWAVVLVAVPVLVWAANTSMLGLSRHTYVLSRNRQIPSWAGRLHRT
                     YATPHVAIAIAAVLAVVLALPADIEFLAGVYAFGALLAATIAHLAIIRLRVTEPDRER
                     PYRVPFNVTLGGRQVPLPAVFAAVVSGLAWASVIAFHEEAVYVGGGWMLFGLVTYLVY
                     RKLVEGVSLTARLTVPEASLKKEEAEVEFRTILVPVFGTKLDDDIVATAGRLADAEVR
                     EGMPPPRMDIVYVAELPLTVPIDAPLPAEVRAQADRALARADDVAREYENVDVGTAFV
                     RARSLGAGIVTEARQRGAEVIVMGAEPPSRVRGGAILGGIGAARPDEIGRVTEYVLQK
                     APCRVLLTAPPEGS"
     gene            complement(4836..5051)
                     /locus_tag="VF061_12795"
     CDS             complement(4836..5051)
                     /locus_tag="VF061_12795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670436.1"
                     /translation="MSGGPDRDRRGPALGPAYTIATRVFSVTIIGFGLAMVVVTLARG
                     GGPASLGVIFGLLFMGIGAGRLWVSTR"
     gene            complement(5048..>5494)
                     /locus_tag="VF061_12800"
     CDS             complement(5048..>5494)
                     /locus_tag="VF061_12800"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEX6670437.1"
                     /translation="LVAFEEDAPFSEDTVATAVKLAAKRRRGIHVVSMLTVPQSLPLD
                     APMPERESEAQSKVEQAKLIGGLRVSGHVHRVRPNQAGHSIAQEAAEMQASAMVVGLR
                     YRDGRPLYGKTLQAILAERPCRVIVVGEPSLARAEAERAEGMGVPG"
BASE COUNT          855 a         2355 c         1477 g          807 t
ORIGIN      
        1 gccgcatgca atccgccgcc gagttcccct cctcgtaaaa gcgccggatc ttgcgccagt
       61 cgaagccgcg gtcattccgc cgccttgatg gaaagccgac ccgggcggca acgcgagaca
      121 ccgtgtccct gtcgatgccc agcttcgccg caatcccgac cttgggcact cgcgcttcga
      181 gaagccgtcg gatctcggcg tcacgttcct cagtcatcga acgaatgttc ccgtaggaac
      241 cagacggaat ccctggaaac acctaagggc cgacgattgc cgacccttct aactccgggg
      301 caaggactcg aaccttggtc tccggctcca gaggccggcg tcttaccggc tagacgaccc
      361 cggaaggttc ggcaacgata gcgaccggtc gcgagccctc ggagctcaga tgagcgatcc
      421 caggtcgctc tcctggtccg ccaagaactc cttcttccca gacacgtcga caccctccgc
      481 cagcagctcg cgcgcgtgcc cgaggtcctc ggagcggccc accgcgagcg tcccggcaac
      541 cttcccgtcc ttcaggtaga agacgctgaa ctcccccgcg tcgcggtccc cgcgccacac
      601 gtcctcgtcc cactcgtacg ccggccccac gtactcgagc gaggcccagt ccgccagatc
      661 gctgaagaag tacggcacca cgtcgtagtc ggccggctcc ccggccatgc acctggccgc
      721 gtggatcccc tgctgcatcg ccacgtccca gtgctccacc cgcagcctcc gcccgtgcac
      781 cacgctgtcg tagctgcaca catccccggc ggcgtagatc ccctccaccg acgtctgcag
      841 cgtcgaatcg cagacgatcc cgcccggcgc ttcgtcggcc acctccaacc cagcccgctg
      901 cgccagcatc acgtcgggcc tcaccccggc gcccaccacc acgaaatcac cctcgaccgt
      961 cttcccgctc tcggtcacca cggccgacac cccctcgtcc ccctcgaacg ccgcgagcgt
     1021 ctcccccccg ttgaactcga cccccttctc ctccatccgc tcctggaacc accgccccgc
     1081 gtcgtccccg aaggtccgcg acaacgccac gtcctccatc atcacgatcg cgcagtccgt
     1141 ccccttcgcg gtcagcgagg cagccacctc gcacccgatg tagctgccgc cgatcagcac
     1201 cacccgctcc gccttctcgg cgtcctcccg aatcgcgtcc gaattgccga acgcccgcag
     1261 gtaatggatc ccctccaact ccgccccctc gacccgcagg atgttcacgt tcgccccggt
     1321 ggcgatcagc gccttgccga actccacctc gtccccgccc tgcagcttca ccctccgcgc
     1381 ctcgggatcc agcgacatca cgttcgtctt cgtccgcagc tgcacgccgt tctgctcgta
     1441 ccaccccgac tcattgacgt acgcgtcctt cctctccgcc tccccccgca ggtactcctt
     1501 ggacaggggc ggccgctcgt acggcggctc aggctcccgc cccaccacca tgatcgatcc
     1561 gtccccatcc ctcttccgca actccgccgc gcagttcccc gcggccatcc ccccgccgat
     1621 cagcaggtag tcgaccgtca ctggccggcc gcccccatca cgtccccacc tcgccgtccg
     1681 acccgaagaa cgtcttcagg tcctcctcca ccgtcgggtc gagcacggcc aacacctcat
     1741 cccccgcctc cagcaccgtg tccggccccg gcacgaaccc gccctctccc ttccgcagca
     1801 cgctgatcag cagcgtcccc tcaggcatgt tcaggtcccc cacccgcttc cccgccacgc
     1861 gcgagtcgtc ggccaacagc atctcgatga tctccagccg ctcctccggc aggtccagca
     1921 ggtgcaccag cccgtactcc ggcacctcgt gctcgatcac ccgcaggatc aggtccgtcg
     1981 cggacacata gggcttcacg cccagcagct cgaagtgcgg ccggttccgt gggttgttca
     2041 cccgcgcgat gatcctgtcc accaggtact tctccttcgc cacctggcag atcagcatgt
     2101 tgtcctcgtc gtcccctgtc accgcgatca ccatgtccgc ccggctgatc cccgcccgct
     2161 ccagcaccca cagctccgac gcgtccccgt attgcacgct gtgctcgagc tcctgctcca
     2221 ccgtcaggta gcggtcccgg ttgttctcga tcagggtcac ctcgtgcccc ttctcgatca
     2281 gctcgcgcgc caggttccac cccaccttcc cggcaccgac gatgatcatg tacttccggt
     2341 cacccatcag gagggcacgt ccccggggtc gccgccctcc caccgcacgc cgtcaccgcc
     2401 cgcggccgcg accagctcct cctcgagcat gttgatcgcc gagcgcgtcg ggcagatcgt
     2461 attcagcccc tgcttctcgt accactccgc gcgcagcggg tccaggatcc gcacgaccac
     2521 cgtgggcacg ttgtagcggc gcttcgcgat ctgggcgatc accacgttcg tgttgtcgcc
     2581 gtcggtggac gcgacgaaag cgtccgccct ctcgatcccg gccgcgctga gcgcgtccgt
     2641 ctcgagcgcc gtcccgacgg tgaactgccc cccggagtcc tcccaggacc tgtccagccc
     2701 cacctcgagg cgggcgtgcg cctcagggtc ctcgtccagg cacgagacct ggtgtccctg
     2761 gcgcaacatg ctccgcgcca ccgatgaccc cacccggccg catccgacga tcagtacgaa
     2821 cacggcggag atgctacggc ttcgccatca atcggggtcg ttggcgggcg ccaacatccg
     2881 tcgctccggg cttcgccctc cgctccatgg ccagcgccct tacgacccct caggaggagc
     2941 ggtcagcagc acccggcacg gcgccttctg cagcacgtac tcggtcaccc tcccgatctc
     3001 gtccggccgc gccgccccga tcccccccag gatcgcccct ccccggaccc ggctcggcgg
     3061 ctccgccccc atcacgatca cctcggctcc cctctgcctc gcctcggtca cgatccccgc
     3121 ccccaggctg cgcgcccgca cgaacgccgt ccccacgtcc acgttctcgt actccctcgc
     3181 gacgtcgtcc gcccgcgcca gcgcccggtc cgcctgcgcc cgcacctcgg ccggcaacgg
     3241 cgcgtctatc ggcaccgtca gcggcagctc cgccacatag acgatgtcca tccggggggg
     3301 cggcatcccc tcacgcacct cggcgtcggc cagccgtccc gccgtggcga cgatgtcatc
     3361 gtcgagcttc gtcccgaaca ccggcaccag gatcgtccgg aactcgacct ccgcctcctc
     3421 cttcttcaac gacgcttccg gcaccgtcag gcgggccgtc agcgagaccc cctccaccag
     3481 cttgcggtag acgaggtacg tcacgaggcc gaacagcatc caccccccgc ccacgtacac
     3541 cgcctcctcg tggaacgcga tcacgctcgc ccacgccagc ccgctcacga ccgccgcgaa
     3601 caccgccggc aacggcacct gccggccccc gagcgtcacg ttgaagggca cccggtacgg
     3661 ccgctcccgg tccggctccg tcacgcgcag cctgatgatc gccagatgcg cgatcgtcgc
     3721 cgccagcagc gccccgaacg cgtacacgcc cgccaggaac tcgatgtcgg ccggaagcgc
     3781 cagcaccacc gccagcaccg ccgcgatcgc gatcgcgacg tgcggcgtcg cgtaagtgcg
     3841 gtgcagccgc cccgcccagc tcggtatctg ccggttccgc gacagcacgt aagtgtgccg
     3901 cgacagcccc agcatcgacg tgttcgccgc ccacaccagc accggcacgg ccaccagcac
     3961 gaccgcccac tgcatcacgt ccgccaccca cgccggctcg aacgactgca ccacccccag
     4021 cacgggcgcc tccaccaggg ctcccgacag cgccgtctcc ggcccgtccg gacccggcac
     4081 cacgggcacc gccatcaggg cgatcgccgc catccccgcg tacagcagcg gcacgatcac
     4141 cgcccccgcc gacgcgatcc tcctcagctc cccctcctcg aagtccaggt ccggcgccag
     4201 gtcgctcgcc gcctcgatcc ccgcataggc gatcgtcgcc accacggccg cgtacacgat
     4261 gtcctcgaag ctcggcgtcg tgaacaggtc cagctccgcg gtcagcgccg acggctcgaa
     4321 caccaccatc accccgaccg cgatcaccag catctgcagc accaggtccg cgagcgccag
     4381 caccaccagc cggttggcgc ggctcccccc cgtcacggcc gtgacgttga tgaacgcggc
     4441 gagcgcgatc accactgcag ccaccaccct ctcctcccat cccgacccga ggttccccca
     4501 gatcggcgtc aggtagtgcg gcaccgagac cgccgcggcg gcgatcacga tcacgtagtc
     4561 gatcaggatc gcccagccgg ccacgaagct gaccagctcg ttgaaggcat ggcgcgcgaa
     4621 cgtcgaggat ccgccccgct cccggtacat ggcgccgccc tcgacatagg tcagcgtcgt
     4681 gatcgcgaac agaacccccg cgccgaggaa gatcaggggc gtcagtccca gcccgcggtc
     4741 ggccacgacc ccgatcgaga agtagatcga gaagccgacc gccgacgcgg cgaccgcgta
     4801 caggaacggc acccccagta gctgcttcgc cctcatcagc gagtcgacac ccagagccgc
     4861 ccggctccga tccccatgaa gagcagcccg aagatcaccc cgagcgaggc cggcccgccg
     4921 ccacgtgcaa gcgtcaccac gaccatcgcc agcccgaacc cgatgatcgt caccgagaac
     4981 acccgcgtcg cgatcgtgta ggcgggaccc agcgcgggcc cccgccggtc cctatccggc
     5041 cccccgctca tcccggcacc cccatcccct cggcccgctc ggcctcggcg cgagccaggc
     5101 tcggctcccc caccacgatc acgcggcagg gccgctcggc gaggatcgcc tggagcgtct
     5161 tgccgtacag cggccgtccg tcgcggtagc gcagccccac aaccatcgcg ctcgcctgca
     5221 tctccgccgc ctcctgcgcg atcgagtgcc cagcctggtt cggtcgaacc cggtgcacgt
     5281 gcccgctcac cctgagcccc ccgatcagct tcgcctgctc gaccttcgac tgcgcctcgg
     5341 attcccgctc gggcatgggc gcatccagcg gcaggctctg cgggacggtc agcatcgaaa
     5401 ccacgtggat gccacgccgc ctcttggccg cgagcttcac cgccgtcgca accgtgtcct
     5461 ccgagaaggg cgcgtcctcc tcgaaggcga ccag
//
LOCUS       DASUYN010000659         2249 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_207380, whole genome shotgun sequence.
ACCESSION   DASUYN010000659 DASUYN010000000
VERSION     DASUYN010000659.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2249)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2249)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2249
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_207380"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..288
                     /locus_tag="VF061_12805"
     CDS             <1..288
                     /locus_tag="VF061_12805"
                     /inference="COORDINATES: protein motif:HMM:NF012632.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670438.1"
                     /translation="GGGHTCGLTLGNLAYCWGWTGGGALGDGTDRLRGRPTAVVGGHQ
                     FTDIAAAVNGLHTCAIDEQAVAYCWGPNFDGQLGNGTFDNALVPTPVAAPN"
     gene            complement(385..795)
                     /locus_tag="VF061_12810"
     CDS             complement(385..795)
                     /locus_tag="VF061_12810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF779 domain-containing protein"
                     /protein_id="HEX6670439.1"
                     /translation="MNVPRVDITPEAAAVLGQLEAQHGPLLFHQSGGCCDGSAPMCYP
                     RGEFRVGERDVHLGDVQGTPVYIGGQQFELWRHTQLLIDVVPGRGSGFSLEAPLGVRF
                     LTRSRVFDAAERAWLTACPPRLGPAGIPGTSGSQ"
     gene            complement(800..>2249)
                     /gene="adh"
                     /locus_tag="VF061_12815"
     CDS             complement(800..>2249)
                     /gene="adh"
                     /locus_tag="VF061_12815"
                     /EC_number="1.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HEX6670440.1"
                     /translation="GEYVAPARGQYFVNPSPVTGEPLCEVARSTHEDIDRALDAAHAA
                     ALSWNTTSPAYRANVPNKIADRIEGNLRDLAFIETMDNGKPIRETLNADLPLAIDHFR
                     YFAGAIRAQEGGIGELDHDTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNC
                     VVLKPAEQTPVSILALMELVADILPSGVVNIVQGFGVEAGKPLASSPRVAKIAFTGET
                     TTGRLIMQYASENLIPVTLELGGKSPNIFFADVMEADDDFFDKTLEGFVMFALNQGEV
                     CTCPSRALVQESIYDRFMERAVARTRAIVEGNPLDEATMIGAQASNDQLEKILSYIDI
                     GKKEGARVLTGGERRVHPGELKNGYYIQPTIFEGHNRMRIFQEEIFGPVVSVTKFKNM
                     DDALSLANDTLYGLGAGVWSRDANTCYRMGRGIKAGRVWTNCYHAYPAHAAFGGYKQS
                     GIGRENHKMMLDHYQQTKNLLVSYSPKKLGFF"
BASE COUNT          358 a          729 c          758 g          404 t
ORIGIN      
        1 ggcggcggtc acacctgtgg cctgacgctg ggcaacctgg cctactgttg ggggtggacc
       61 gggggtgggg cgctcggcga tggcaccgat cgcctgcggg gccggcccac ggcggtggtc
      121 ggagggcacc aattcaccga catcgccgcg gccgtgaacg gcttgcatac gtgcgcgatc
      181 gacgaacagg ccgtggccta ctgctgggga ccgaacttcg acgggcaact gggcaacgga
      241 accttcgaca atgctctggt cccgacaccg gtggcggccc cgaactaacg gctccctacc
      301 gtggtcggag cttcggcggc caaagggggc gtacccaacg ggcagcacgc ggggaccggg
      361 gtgccgatgc atccaccgga gcgctcactg gctaccgctg gtacccggta tcccggctgg
      421 tccgagacgc ggtgggcagg ccgtgagcca ggcgcgctcc gccgcgtcga acacgcggga
      481 tcgggtaaga aacctgacac ccaagggggc ttcgagcgag aaaccgcttc cgcggccggg
      541 taccacgtcg atcagcagtt gggtatggcg ccagagctcg aattgctgtc cgccgatgta
      601 caccggtgtg ccctgcacgt cacccaggtg tacgtcgcgc tcgcccactc ggaactcccc
      661 ccgcgggtag cacatcgggg cgctcccatc gcagcatccc cccgattgat ggaagagaag
      721 cggaccgtgc tgcgcctcga gctgacccag cacggccgcc gcctccgggg tgatgtccac
      781 ccgtggcacg ttcatcgact cagaagaaac cgagcttctt ggggctgtag ctgaccagga
      841 ggttcttggt ctgctggtaa tggtcgagca tcatcttgtg gttctctcgt ccgatgcccg
      901 actgcttgta gccgccgaac gccgcatgcg ccgggtaggc gtgatagcag ttggtccaga
      961 ctcggccggc cttgatcccg cggcccatcc ggtagcaggt gttggcgtcg cgactccaga
     1021 ctcccgcacc cagcccgtag agcgtgtcat tggccaggga cagcgcgtcg tccatgttct
     1081 tgaacttagt gacggagacg acggggccga agatctcctc ctggaagatg cgcatccggt
     1141 tgtgcccttc gaaaatggtg ggctggatat agtatccgtt cttcagctca cctggatgga
     1201 cccggcgctc tccgccggtc aggaccctgg caccctcctt cttgccgatg tcgatgtagc
     1261 tcaggatctt ctccagctgg tcgttggagg cctgggcgcc gatcatggtg gcctcgtcga
     1321 gcggattgcc ctcgacgatc gcccgggttc tcgccaccgc ccgttccatg aaccggtcgt
     1381 agatcgactc ctgcaccagc gcccgggacg ggcaggtgca cacctcgccc tggttcaggg
     1441 caaacatgac gaacccttcc agggtcttgt cgaagaaatc gtcgtccgcc tccatgacgt
     1501 cggcgaagaa gatgttgggc gacttgcccc ccagctccag ggtgacgggg atgaggttct
     1561 cggaggcgta ctgcatgatg agccgtccgg tcgtcgtctc gccggtgaac gcgatcttgg
     1621 cgacccgggg gctcgacgcg agcggcttcc ctgcctccac cccgaagccc tggacgatgt
     1681 tcaccactcc gctcggcagg atgtcagcga ccagctccat gagtgcgaga atcgacaccg
     1741 gcgtctgttc cgccggcttc aggacgacgc agttcccggc cgccagcgcc ggagcgagct
     1801 tccacgtcgc catgagcagc gggaagttcc acgggatgat ctggcccacg accccgagcg
     1861 gctcgtggaa gtggtaggcc accgtgtcgt ggtcgagctc cccgatgccc ccctcctgcg
     1921 cgcgaatcgc gcccgcgaag tagcggaagt ggtcgatcgc caggggtagg tccgcgttga
     1981 gggtctcccg gatgggcttc ccattgtcca tggtttcgat gaatgcgagg tccctgaggt
     2041 tcccctcgat ccggtcagcg atcttgttgg gcacgttggc gcggtaggct ggagacgtgg
     2101 tgttccaact gagcgcggcg gcgtgggcgg cgtccagcgc ccggtcgatg tcttcgtggg
     2161 tggaccgcgc gacctcgcag aggggctcgc cggtgaccgg cgaagggttg acgaaatact
     2221 ggcctcgggc cggtgcgacg tattcgccc
//
LOCUS       DASUYN010000660         2163 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_431333, whole genome shotgun sequence.
ACCESSION   DASUYN010000660 DASUYN010000000
VERSION     DASUYN010000660.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2163)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2163)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2163
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_431333"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..500)
                     /locus_tag="VF061_12820"
     CDS             complement(<1..500)
                     /locus_tag="VF061_12820"
                     /inference="COORDINATES: protein motif:HMM:TIGR00566.1"
                     /note="Members of this family of hydrolases with an active
                     site Cys residue belong to MEROPS family C26; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HEX6670441.1"
                     /translation="MTRILVVDNYDSFVFNLVQYLGQLGSECVVRRNDEVTVEEAADG
                     FDGVLLSPGPGAPEDAGVCVEMVTALAGRVPLFGVCLGHQAIGVAYGATVGRAPELLH
                     GKTSEVHHDGVGVLAGLPDPFTATRYHSLTVAEETIPAELEVTGRTPSGVVMALRHRE
                     LAVEGV"
     gene            complement(497..670)
                     /locus_tag="VF061_12825"
     CDS             complement(497..670)
                     /locus_tag="VF061_12825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670442.1"
                     /translation="MTVYSWIWRHLPGGLPGRLIGTLLLVAGVVALLWFVVFPWAEPI
                     LPFGDVTVEGEAP"
     gene            complement(667..1317)
                     /locus_tag="VF061_12830"
     CDS             complement(667..1317)
                     /locus_tag="VF061_12830"
                     /inference="COORDINATES: protein motif:HMM:NF033747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class E sortase"
                     /protein_id="HEX6670443.1"
                     /translation="MIRTAIRGFGEVLITLGLVVLLFAAYEVYGKALQANAEQNRLGS
                     ALEDQWNAPVAPGTKPVADKPIPGAGVARLYIPRLGKDWVVVEGVAPKDIKLAPGRYP
                     KSQLPGQVGNFAVAGHRMPSIFWDLDKVKVNDPMIAETRTGWYVYTVSKVFIVKPTRT
                     SVVAANPDDPGSPATRKLLTLTTCNPKWDNYERLVVQAEMVREQPKSAGRPAELGE"
     gene            complement(1314..>2163)
                     /locus_tag="VF061_12835"
     CDS             complement(1314..>2163)
                     /locus_tag="VF061_12835"
                     /inference="COORDINATES: protein motif:HMM:NF017734.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF881 domain-containing protein"
                     /protein_id="HEX6670444.1"
                     /translation="FLRTRDLGTVSPVNGLPDSVVNNESRVGGDVPASGSERRRSRIW
                     SVLLPAVLLSAGMLLATSANTSSGHDLRGGRINELQQLISARTGAVEAAQRRAADLQK
                     QIDDATEARAQNDARLQGPQAKADALKDPVGLVAVTGPGITVQMDDAPRSADGSLPAG
                     AGVDDVVVHQQDVQAVVNALWAGGAEAMTIMGERVISTSAVRCVGNTLLLHGRTFSPP
                     FVMTAIGDTKRMQTALGSSPGVANFQEASRRFGLGYRVTVELTDVRLPAYRGTTTMKH
                     AATPSR"
BASE COUNT          326 a          772 c          725 g          340 t
ORIGIN      
        1 tgcaccccct cgacggccag ttcacggtgc cgcagcgcca tcaccacacc cgacggcgtg
       61 cgcccagtga cctccagctc ggccgggatc gtctcctcgg cgaccgtgag tgagtggtac
      121 cgggtggccg tgaacggatc gggtagcccc gccaggacgc ccacgccgtc gtggtggacc
      181 tcgctggtct tgccgtggag gagttcgggc gcgcggccca ccgtggcgcc gtaggccaca
      241 ccgatcgcct ggtgcccgag gcagacgccg aagaggggca cccggccggc gagggcggtg
      301 accatctcga cgcagacgcc ggcgtcctcg ggcgcgccgg ggccgggcga gaggagcacc
      361 ccgtcaaagc cgtccgcggc ctcctcgacc gtgacctcgt cgttgcgccg gaccacgcac
      421 tccgatccga gctgcccgag gtactggacc aggttgaaga cgaacgagtc gtagttgtcg
      481 acgacgagga tccgcgtcac ggagcctcgc cctcgacggt gacgtccccg aacggcagga
      541 tcggctccgc ccacgggaac acgacgaacc agagcagcgc cacgaccccg gccacgagca
      601 gcagcgtgcc gatcagccgc ccgggcagac cgccgggcag gtgccgccag atccacgagt
      661 acacggtcat tcccccagct ctgccggccg accggccgac ttgggttgct cacgcaccat
      721 ctcggcctgg acgacgagcc gctcgtagtt gtcccacttc gggttgcagg tggtgagggt
      781 gagcagcttc ctcgtcgccg gcgagccggg gtcgtcgggg ttggcggcca cgacggacgt
      841 ccgggtgggc ttgacgatga acaccttgct cacggtgtag acgtaccagc cggtgcgggt
      901 ctcggcgatc atcgggtcgt tgaccttcac cttgtcgaga tcccagaaga tcgacggcat
      961 gcggtgcccg gcgaccgcga agttgccgac ctggccgggg agctggctct tggggtaccg
     1021 gccgggcgcg agcttgatgt ccttcggcgc gacgccctcc acgaccaccc agtccttgcc
     1081 gaggcggggg atgtagaggc gagccacacc ggctccgggg atcggcttgt cggcaaccgg
     1141 cttcgtgccg ggcgccaccg gggcgttcca ctggtcttcg agcgcgctac cgaggcggtt
     1201 ctgctcggcg ttcgcctgga gcgccttgcc gtacacctcg tacgcggcga agagcagcac
     1261 gaccaggccc agtgtgatca ggacctcacc gaagccgcgg atcgcggtac ggatcaccga
     1321 ctgggggtgg ccgcgtgttt catcgtggtg gtaccccgat acgccggcag ccgcacgtcg
     1381 gtcagctcga cggtgacccg ataccccagc ccgaacctcc gggatgcctc ctggaagttc
     1441 gccacccccg gggaactgcc gagtgcggtc tgcatccgct tcgtatcgcc aatggccgtc
     1501 atcacgaacg gggggctgaa cgtccggccg tggagtaaca gggtattgcc cacgcaccgt
     1561 accgcgctgg ttgaaatcac cctctcgccc ataatcgtca tcgcttccgc gccacccgcc
     1621 catagtgcgt tcaccaccgc ctgcacgtct tgttggtgga ccacgacatc atccacccca
     1681 gctcctgccg gcagcgaacc gtccgcggag cgcggagcgt cgtccatctg cacggtaatg
     1741 cccggcccgg tgaccgccac caggccgacc gggtccttga gggcgtccgc cttggcctgc
     1801 ggcccctgca gccgggcgtc gttctgtgcc cgggcctcgg tggcgtcgtc gatctgcttc
     1861 tgcaagtcgg cggcgcgccg ctgggccgcc tccacggccc cggtacgggc actgatgagt
     1921 tgctgcagtt cgttgatacg ccccccgcgc aagtcgtggc cgctggacgt gttcgcgctc
     1981 gtggcgagga gcatcccggc ggacagcagg acggcgggca gcagtacgct ccagatccgg
     2041 ctgcggcgcc gctccgaccc gctcgctggc acatcgcctc ctactcgact ttcgttgttg
     2101 actacgctat cgggcaaccc gttcacagga gacaccgtgc ccaagtcccg cgtacgcaag
     2161 aag
//
LOCUS       DASUYN010000661         6171 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1753000, whole genome shotgun sequence.
ACCESSION   DASUYN010000661 DASUYN010000000
VERSION     DASUYN010000661.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6171)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6171)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6171
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1753000"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..415
                     /locus_tag="VF061_12840"
     CDS             <1..415
                     /locus_tag="VF061_12840"
                     /inference="COORDINATES: protein motif:HMM:NF015999.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="YbaK/EbsC family protein"
                     /protein_id="HEX6670445.1"
                     /translation="ITHSPAHTAQEIAAAAHIPGKEMAKTVMVKMDGEMVMVVLPASA
                     KVELGRLLDATGADEVELAQEREFKHLFPGCELGAMPPFGNLFDLATFVAEELTEDEE
                     IAFNAGTATDLIRMRYEDYARLVQPRSLPFRITVW"
     gene            complement(435..1841)
                     /locus_tag="VF061_12845"
     CDS             complement(435..1841)
                     /locus_tag="VF061_12845"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX6670446.1"
                     /translation="MSELALFALLVTGYFAAVNTIYLLQLLVGWRAVRRRLRAIVLED
                     FRDIRESGLGPPVSIIVPAHNEGVTILDSVRSLLGLRYPRLEVVVVNDGSTDDTLALL
                     IAEFGLRRTPRVYWQRIRSQPVRGIYWSPAHPGLWVLDKVNGRKADAVNAGINLASAP
                     YVCVVDGDSVLERDAMAAIMNAVLPRPAETVAAGGAVRIANGCEIGRGSGVMRAGLPR
                     TWVGTTQVLEYLRAFLFGRVAWGDLDALMIISGAFGVFRKDVVVEIGGFRHETVGEDM
                     DLVVRMHRHLRAAGRPYRVAFVPDPVCWTECPETFEALRHQRVRWQRGLGETLDQNHE
                     MLASPRFGRIGLFAMPYLMGVEYLGPLLEVAGFALLPLGWALGLLDHSLFLLFLGLGP
                     AYGLCLSLATLLLEELTFRRYREPRHLLRLAAAAVVENFGIRQLHSWWRLVALITWRG
                     RPQVWRAVPRRGFSAGQV"
     gene            complement(1838..2908)
                     /locus_tag="VF061_12850"
     CDS             complement(1838..2908)
                     /locus_tag="VF061_12850"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HEX6670447.1"
                     /translation="MTGYEVGLMVALAALAASLLAALLLAHWWHGRLEARAARIRQSL
                     LPMLASHAEPDPRPSAPVWLDGLSRRDGRMALVACLEALPSLDPTAAKRVRTVLHRSQ
                     LARRELARLRHRSAAVRSEACRVAGRLGGDGTVPLLVERLRDDDYGVRREAIRALGEL
                     RAAETVPEIAAAIEGMADWSNLLLLMALIRIGPDAAPAIGALLGDPGARSPAMIKALL
                     QVSSRLGVVADAATVRALASHADPEIRVESVRVLGAIAPDAESLRVCLAAMDDPEWPV
                     RAIAASSLGRRGDARALPRLARAMGEPAYWVRHHVADAMASLGAAGAGALQAALLDDN
                     PFVRDMAAQALFMRAPADGEAA"
     gene            complement(2905..4011)
                     /locus_tag="VF061_12855"
     CDS             complement(2905..4011)
                     /locus_tag="VF061_12855"
                     /inference="COORDINATES: protein motif:HMM:TIGR04390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YaiO family outer membrane beta-barrel protein"
                     /protein_id="HEX6670448.1"
                     /translation="MAGAPQLAAAQAPAPELARLRLKAEQLRREQRLPAALDAYRAVV
                     EQEPGSFEDRFWVAKLESWTGRLPAADSGLVRLLAERPDDYDSRIALADVRLWRGDTA
                     ASGELLDRLRRDYPDDLEVRQRLGALAGGERRGRWEADFEYFGERLPGVAAANGAGLS
                     LAARRSERLRWRAAAMLQEKFDRTESRAGGEIGFRPAERLEVAVSVFLAPGAEVLPSG
                     SYGLGASHRLARGVVLYGDYTHLRYQDAHVHQVGPAVELYHGRWLVTGRFRWAATRYA
                     GATAAVHDAAGTLAVGYLYGERSLVRVFGAAGGESFTQPSRELIGRFEAHTLGLSWRH
                     FLTPGFGVEALYAHQERSGGTDGDSWSLRVLRRW"
     gene            complement(4260..>6171)
                     /locus_tag="VF061_12860"
     CDS             complement(4260..>6171)
                     /locus_tag="VF061_12860"
                     /inference="COORDINATES: protein motif:HMM:NF028476.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="protein ndvB"
                     /protein_id="HEX6670449.1"
                     /translation="LREHTQHQVHTAFEPEHGAILAQNRFDAHFAGQVAFCALSAPLA
                     TYTADRREFLGRNGSPQAPLGLDGPLSGAAGAGLDPCAVLRTVLDLAPGESREVAVLL
                     GAAEGREAALELMRRFARPEAARDAIEATRRRWRERLSVVSVRTPEPAFDLLVNRWML
                     YQAISCRMWGRTALYQSSGAYGFRDQLQDAMALVYAEPALAWEQVVRAAGRQFLEGDV
                     QHWWHPHSGRGVRTKFSDDLVWLPYVVDHYVRVTGDTAVLDEVAPYLRMRELLPEEHE
                     AYDLPESSGQLGTVYDHCLRALRRACTEGPHGLPLIGAGDWNDGMNRVGVEGKGESVW
                     LAWFLIATLRGFAKRCDARGDTASSAELRGRADRYLAAVETHGWDGEWYRRAYYDDGT
                     PLGSATNDECRIDSIAQSWSVISGAGAAERQALAMRSLERHLVREDVGILLLTPPFDH
                     TSHDPGYIKGYLPGVRENGAQYTHAALWAVLATAMRGDGERAFALFQLLNPLERTRTA
                     EAVATYRTEPYVVAADVYSAEGHVGRGGWTWYTGSASWMYRVGLEAILGFTKEGNRLR
                     IDPRVPDAWPEFRLDYRYGGAMYEVVVERPAVARAGAQQVMLDGRALEGEWIDLVDDG
                     GRHSVVIRPLPG"
BASE COUNT          924 a         2298 c         2192 g          757 t
ORIGIN      
        1 catcacccat tcgccggccc acaccgcgca ggagatcgcc gcggcggcgc acatccccgg
       61 caaggagatg gccaagacgg tgatggtgaa gatggacggc gagatggtga tggtggtgct
      121 gccggcatcg gccaaggtgg agctgggccg tctgctggac gcgaccggcg ccgacgaggt
      181 ggagctggcc caggaacggg agttcaagca cctgttcccg ggatgtgagc tcggggccat
      241 gccgccgttc ggcaacctgt tcgacctcgc gacgttcgtg gccgaggaac tgaccgagga
      301 cgaggagatc gccttcaacg ccggaacggc gacggacctg atccgaatgc ggtacgagga
      361 ctacgccagg ctggtgcagc cgcgctcgct gccgttcagg atcacggtgt ggtagggagc
      421 gcccggccgg accgctagac ctggcccgcc gagaaccccc ggcgcggcac ggctcgccag
      481 acctggggcc gtccgcgcca ggtgatcagc gcgacgagtc gccaccagct gtgcagctgg
      541 cggatgccga agttctccac caccgctgcc gcggcgagcc gcagcaggtg gcgcggctcg
      601 cggtagcgcc ggaacgtgag ctcctccagc aggagcgtcg cgagcgacag gcagagccca
      661 taggcggggc cgaggccgag gaacagcagg aagagcgagt ggtccagcag gcccagcgcc
      721 caccccagcg gcaggagggc gaaccccgcg acttccagca ggggtcccag atactcgacc
      781 cccatcaggt aaggcatcgc gaacaggccg atccgcccga accggggact ggccagcatc
      841 tcgtggttct gatccagggt ctcccccagc ccgcgctgcc accgcacccg ctggtggcgg
      901 agcgcctcga aggtctcggg gcactcggtc cagcacaccg ggtcgggcac gaacgccacc
      961 cggtagggcc ttccggcggc ccgcaggtgg cggtgcatcc gcaccaccag atccatgtcc
     1021 tcgcccacgg tctcgtgccg gaacccgccg atctcgacca ccacgtcctt ccggaacacg
     1081 ccgaacgcgc cggagatgat catgagcgcg tcgagatcgc cccacgccac ccgcccgaag
     1141 aggaaggccc gcaggtactc cagcacctgg gtcgttccga cccaggtccg cgggagtccc
     1201 gcccgcatca cgccactacc ccgaccgatc tcgcaaccgt tcgcgatccg gacggcgccg
     1261 ccggcggcca cggtctccgc cggacggggg agcacggcgt tcatgatcgc ggccatcgcg
     1321 tcgcgctcga gcacgctgtc gccgtccacc acgcacacgt agggcgccga cgccagattg
     1381 atcccggcgt tcaccgcgtc ggccttccgc ccgttcacct tgtccagcac ccagagcccg
     1441 gggtgggccg ggctccagta gatgccgcgg accggctggc tccggatgcg ctgccagtac
     1501 acccgcggcg tccgccgcag gccgaattcg gcgatcagga gcgccagcgt gtcgtcggtg
     1561 gagccgtcgt tgacgacgac gacctcgagg cggggatagc gcagcccgag cagcgaccgc
     1621 accgaatcga ggatcgtgac tccctcgttg tgagccggca cgatgatgga gaccgggggc
     1681 ccgagtcccg actcgcggat gtcgcggaag tcctccagga cgatggctcg caggcggcgg
     1741 cgcaccgcgc gccagcccac caggagctgg agcaggtaga tcgtgttcac cgccgcgaag
     1801 tagccggtca cgagcagtgc gaacagcgcc agctcgctca tgccgcctcc ccgtcggcgg
     1861 gcgcgcgcat gaagagcgcc tgggccgcca tgtcgcgaac gaagggattg tcgtcgagca
     1921 gcgccgcctg gagcgcgccg gcgccggccg cacccaggga ggccatcgcg tcggcgacgt
     1981 ggtggcgaac ccagtaggca ggctccccca tcgcgcgcgc gagccggggc agagcgcgcg
     2041 cgtccccccg ccggccgagc gaagaggcgg cgatggcacg caccggccac tcgggatcgt
     2101 ccatcgccgc caggcacacc ctcagggact cggcgtcggg ggcgatcgcg cccagcacgc
     2161 ggacggattc gacccggatc tccggatcgg cgtgcgaagc gagcgcgcgg accgtcgcgg
     2221 catcggccac gacgccgagg cggctgctga cctggagcag cgccttgatc atcgcggggg
     2281 agcgcgcgcc ggggtcgccg agcagggcgc cgatcgcagg cgcggcgtcg gggccgatgc
     2341 ggatcaaggc catcaggagg aggaggttgc tccagtccgc catcccctcg atcgccgcgg
     2401 cgatttccgg gacggtctcg gccgcgcgga gctcccccag ggcgcggatc gcctcgcggc
     2461 ggacaccgta gtcgtcgtcc cgaagccgct ccaccagcag cgggacggtc ccgtcgccgc
     2521 ccagtctgcc ggcgacgcgg caggcttcgc tccgaacggc cgcggaccgg tggcgcaagc
     2581 gagcgagctc acgtcgagcg agctgcgagc ggtggagcac ggtccgcacc cgcttcgccg
     2641 ccgtcgggtc gagagagggc agcgcctcga ggcaggcgac caacgccatc cgcccgtcac
     2701 ggcgtgagag accgtcgagc cagacgggcg ccgagggcct cgggtccggc tcggcgtggc
     2761 tcgccagcat cgggagcagc gactgccgga tccgcgcggc ccgggcctcg aggcgcccat
     2821 gccaccagtg ggccagcagc aatgccgcca ggagcgacgc cgcgagcgcc gccagggcga
     2881 ccatcaggcc gacctcgtag ccggtcacca ccgacgcagc acccgcaggc tccacgagtc
     2941 cccgtcggtg ccgccggagc gctcctggtg ggcgtacagc gcctcgaccc cgaatcccgg
     3001 ggtgagaaag tgacgccagg agaggccgag cgtgtgcgcc tcgaaccggc cgatcagctc
     3061 gcgcgacggc tgggtgaacg actcgccgcc cgccgcgccg aacacccgca cgaggctgcg
     3121 ctcgccgtag agatagccga cggcgagcgt gccggcggcg tcgtgcaccg cggcggtcgc
     3181 gccggcgtag cgggtcgcgg cccaacggaa gcgtccggtg accagccaac gcccgtggta
     3241 cagctcgacc gcgggcccga cctggtgcac gtgggcatcc tgatagcgga ggtgggtgta
     3301 gtccccgtag agcaccacgc cccgcgcgag gcggtggctg gcaccgaggc cgtagctgcc
     3361 gctcggcagc acctcggcgc cgggcgcgag aaagaccgac accgcgacct cgagccgctc
     3421 cgcgggccgg aagccgatct ctccgccggc gcgggactcg gtgcggtcga acttctcctg
     3481 gagcatcgcc gcggcgcgcc agcggaggcg ctcgctccgt cgcgccgcga gcgatagccc
     3541 cgccccgttc gcggccgcga cgccgggaag ccgctcaccg aagtactcga agtccgcctc
     3601 ccagcgcccc cgacgctccc cgccggccag cgcgccgagg cgttgccgca cctcgagatc
     3661 gtcggggtag tcccgccgca gccggtccag cagctcgccc gaggcggccg tgtccccccg
     3721 ccagagtcgg acgtcggcga gagcgatccg gctgtcgtaa tcgtccggac gctcggccag
     3781 gagccgcacc aggccgctgt cggcggcggg gagacggccg gtccagctct cgagcttggc
     3841 gacccagaac cgatcctcga agctcccggg ctcctgctcc accaccgcgc ggtaggcgtc
     3901 cagcgccgcg ggcagccgtt gctccctgcg gagctgctcc gccttcaggc ggagccgggc
     3961 gagctccggc gccggagcct gggcggccgc gagctggggc gcccccgcca cggggagcag
     4021 cagcgcgagg gccgcgatgg cggtccggag gatgtgccgg gatcgggcga gcgtgggcgt
     4081 aggccctcct gctccgcgtg ttcgagggag actcgagcgc gtccggagca aggcgggtgc
     4141 ccggatagtg cacctgcaag ttcaaacgcg acaagcgctt cggggaacgg gccagagtcc
     4201 gtcctgaggc ccgtgggaga tccgcgtgcc gggggtgcga tttgccaccc ccccgggagt
     4261 caccccggta gcggccggat cacgaccgag tgccggccgc catcgtccac cagatcgatc
     4321 cactcgcctt cgagggcccg cccgtcgagc atgacctgct gcgcgccggc gcgggccacg
     4381 gccggccgct cgaccacgac ctcgtacatc gcgcccccgt accggtagtc cagcctgaac
     4441 tcgggccacg cgtccggcac ccgcgggtcg atccggagcc gattcccctc ctttgtgaac
     4501 ccgaggatcg cctccagtcc cacccggtac atccagctcg ccgagccggt gtaccaggtc
     4561 cacccgccgc ggccgacgtg tccttccgcc gagtacacgt cggcggcgac gacgtagggc
     4621 tccgtccggt aggtggcgac cgcttccgcg gtgcgggtcc gctccagcgg gttgagcagt
     4681 tggaacagcg cgaaggcccg ctcgccatca cccctcatcg ccgtcgccag caccgcccag
     4741 agcgcggcgt gggtgtactg ggcgccgttc tcgcgcacgc ccggcaggta ccccttgata
     4801 tagccggggt cgtgtgaggt gtggtcgaac ggcggagtga gcaggagaat cccgacatcc
     4861 tcccggacca ggtgccgctc cagcgagcgc atcgcgagcg cctgccgctc ggccgcgccg
     4921 gccccggaga tgacgctcca gctctgggcg atggagtcga tccggcattc gtcgttggtc
     4981 gcggagccca gcggcgtacc gtcgtcgtag tacgcccgcc ggtaccactc gccgtcccac
     5041 ccgtgcgtct cgaccgccgc caggtagcga tcggcgcgcc cgcgaagctc ggccgacgac
     5101 gccgtgtccc cacgcgcgtc gcagcgcttc gcgaagccgc gcaacgtggc gatcaggaac
     5161 caggcgagcc agacgctctc ccccttgcct tccacgccca cccggttcat cccgtcgttc
     5221 cagtcgcccg cgccgatgag cggcagcccg tgcggaccct cggtgcaggc ccggcgcagc
     5281 gcccgcaggc agtggtcgta caccgttccg agctgacccg agctctcggg gaggtcgtat
     5341 gcctcgtgct cctccggcag cagctcgcgc atccggagat agggggcgac ctcgtccagc
     5401 accgcggtgt cgccggtgac gcggacgtag tggtccacga cgtaggggag ccacacgagg
     5461 tcgtcggaga acttggtgcg taccccgcga ccgctgtggg ggtgccacca gtgctgcaca
     5521 tcgccctcga ggaactggcg gccggcggcg cgcacgacct gctcccaggc caacgccggc
     5581 tccgcgtaca ccagcgccat cgcgtcctgg agctggtcgc ggaagccgta cgccccgctg
     5641 ctctggtaga gcgccgtccg cccccacatc cggcaggaga tcgcctggta gagcatccat
     5701 cggttgacca ggagatcgaa cgccggctcc ggcgtgcgga ccgacacgac cgacaaccgc
     5761 tcccgccagc gcctccgggt cgcctcgatg gcgtcgcggg ccgcttccgg acgggcgaac
     5821 cgtcgcatca gctccagcgc ggcctcgcgg ccttccgccg cgccgagcag cacggcgacc
     5881 tcgcggctct cgccgggcgc caggtccagg accgtccgga gcacggcgca gggatccagc
     5941 ccggcgccgg ccgcgcccga gagcggcccg tccagcccca acggcgcctg cggcgagccg
     6001 ttccggccga ggaactcccg gcggtcggcc gtataggtcg cgagcggcgc gctcaacgcg
     6061 cagaaggcga cctgtcccgc gaagtgggcg tcgaatcggt tctgcgcgag gatcgccccg
     6121 tgctccggct cgaacgccgt gtgcacctgg tgctgggtgt gctcgcgcag c
//
LOCUS       DASUYN010000662         5687 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1753186, whole genome shotgun sequence.
ACCESSION   DASUYN010000662 DASUYN010000000
VERSION     DASUYN010000662.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5687
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1753186"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..624)
                     /locus_tag="VF061_12865"
     CDS             complement(<1..624)
                     /locus_tag="VF061_12865"
                     /inference="COORDINATES: protein motif:HMM:NF015000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HEX6670450.1"
                     /translation="MRRPHVIAHRGASGYEYENSRAAFRRAVMLDADGVELDVHATRD
                     GAFVVHHDADIPGFGPIPLLSREEARQVRIRNGEPLPLLSEVLELVGEREVYVEVKSL
                     PEAHDQELLAVLDRGPAPDRYSVHSFDHRIIRRLGACRPELRRGILLSAYLDDAVAAM
                     KAVGATTLWQEWQQVDRDLVNRVHEAGFAIIAWTVNEIGDMERMARLG"
     gene            681..1229
                     /locus_tag="VF061_12870"
     CDS             681..1229
                     /locus_tag="VF061_12870"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX6670451.1"
                     /translation="MSASPVLVTPSDHELASAYRAGDERAAAELVRRHAPALGRFLYS
                     SGAPPGDIDDLVQEALFRAFRRLEGWRGEASFRSWLFAIAGNVLRDEFRRRKGRQVLS
                     LEDRDLPDHADPHADLAATEVEEGLRRGIAALPRLQREVFLLRTQQGSGYVEIAAALG
                     TTPGAARVHYHHAVKRLKELVR"
     gene            1226..1747
                     /locus_tag="VF061_12875"
     CDS             1226..1747
                     /locus_tag="VF061_12875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670452.1"
                     /translation="MTDCERLSDRMPEVAMARAAWSSEEAAHLASCTGCRGEWDLVLA
                     ARRLEARAPVVDGDAIAAAVQRRLTAERTGRRRTRRLWTAAGSAAAAAAAIAIAVGTG
                     RAPEPEAGPEVVAQGEALVPLPELEGLETAQLDTLLQALEGPLAGSSTLESSTMSDDV
                     DAELERILDTGEG"
     gene            1747..2235
                     /locus_tag="VF061_12880"
     CDS             1747..2235
                     /locus_tag="VF061_12880"
                     /inference="COORDINATES: protein motif:HMM:NF019430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HEX6670453.1"
                     /translation="MPRLLLCLLLLGGTVTPLLAQDPPPPHGGARLRERIEHRFAERI
                     RTELDLTDEQAARLKEVAKENGGRRRELRRRERALSGALERQLDAGAQADQDSVARLT
                     RDLLDLRIEYARTWREEMAKLSFLTPVQRARLMVMRDRLFQRVHEMREDRRGFRHYGD
                     DD"
     gene            2269..3582
                     /locus_tag="VF061_12885"
     CDS             2269..3582
                     /locus_tag="VF061_12885"
                     /inference="COORDINATES: protein motif:HMM:NF014062.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HEX6670454.1"
                     /translation="MRRLHLLTLASLALAAPAAAQTPVVYRIAVTGTVENGLAPYVAR
                     SLEEASAAGAAAAYLDIDTPGGRVDAAERISDAVRRADLPVYAFVNPRAFSAGALIAI
                     SAKEIYMRPGAVIGAATPVDGEGQRAPEKMVSAMRAEFRAVAEERGLDPRIAEAMVDE
                     AVEIPGVVKQGQLLTLTSSEARKVGYARGEVSDEAALLAAVGLAGARVVAVEPNWAEL
                     VVRFLTNPLVSPLLLSLGMLGLVLEIKSGAFGLGGLLSVASLGLFFGSSFLLGLAGWE
                     EVLLLGLGLIALGIEIFILPGFGVAGVLGLAALSGAMVLALMGAAPTSGDVAQALAIL
                     GASLVITAAVIYAWLRHIPNSDRWGGLFLRGGMAQSEGYISALPRADLVGQEGVAITD
                     LRPAGTATIAGERVDVVTEGEFVTQGSPVRVLRSEGYRHVVRGAS"
     gene            3619..4617
                     /gene="floA"
                     /locus_tag="VF061_12890"
     CDS             3619..4617
                     /gene="floA"
                     /locus_tag="VF061_12890"
                     /inference="COORDINATES: protein motif:HMM:NF010186.0"
                     /note="flotillin-like protein involved in membrane lipid
                     rafts; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flotillin-like protein FloA"
                     /protein_id="HEX6670455.1"
                     /translation="MDDSMVSLGMVLALIFIAVMVVVVFFHFIPFGLWLTALFSGIRV
                     SFFTLFGMRFRRVDPRAIVLPLISGHKAGIALNVNDLEGHFLAGGNVNRVVNALISAD
                     KAGIALTYKQATAIDLAGRDVFEAVQVSVNPKVITTPKVAAMAKDGIQLLALARVTVR
                     ANINRLVGGAGEETILARVGEGIVSTIGSASSHKAVLENPDLISKTVLSKGLDAGTAF
                     EILSIDIADVDVGKNIGAELQTDQAEADKRIAQAKAEERRALAVAMEQEFKAEGQKQR
                     AAVIAAEAQIPLAMAEAFRSGNLGVMDYQRYRNVQADTTMRQAIAGQGDSAPSVGS"
     gene            4620..5249
                     /locus_tag="VF061_12895"
     CDS             4620..5249
                     /locus_tag="VF061_12895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670456.1"
                     /translation="MDFGGLLVLGIVWLLFNLIGQGKKGTRPAPRTSPPREPAPSGPA
                     APGGSGDPTQREGSRLEQLLRELERNLEGVAGTQSPSTPRLPVPKRVGASRLPPEPTP
                     PEEEEDVEERDSLEEPERVISLETDVPRRQRVAYDQDADAEALVHRRIEAARDRDRAL
                     SKVDHKAFDARIRQEPAEHTAVRRYTAAQLRDAVVWREILGPPVSEREP"
     gene            complement(5246..>5687)
                     /locus_tag="VF061_12900"
     CDS             complement(5246..>5687)
                     /locus_tag="VF061_12900"
                     /inference="COORDINATES: protein motif:HMM:NF012922.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HEX6670457.1"
                     /translation="KALGIYRLDRVLHSAVHYPGDYGFLPRTLGEDGDPLDVLVLMTI
                     PVFTGCLVEARPIGLFHLVDRGVPDEKVLAVPTGDPYSEGLTDLRDIPRHYLKEIEHF
                     FQVYKDLEGTRTETKGFEGAAPAREAIVRAMELYRSSFEPSLRP"
BASE COUNT          854 a         1939 c         2060 g          834 t
ORIGIN      
        1 gccgagccgg gccatacgtt ccatgtcgcc gatctcgttc acggtccagg cgatgatcgc
       61 gaacccggcc tcatgcaccc ggttgaccag gtcacggtcc acctgctgcc actcctgcca
      121 cagggtcgtg gccccgacgg ctttcatcgc cgccaccgca tcgtcgaggt acgccgagag
      181 caggatgcct cgcctgagct caggacggca ggcacccaac cggcggatga tccggtggtc
      241 gaagctgtgg accgaatagc ggtccggtgc agggccgcgg tcgaggacgg cgagcagctc
      301 ctggtcgtgc gcttccggaa ggctcttgac ctcgacatac acttcacgct ccccgaccag
      361 ctccagaacc tccgagagca gcggcagcgg ctcaccgttt cgaatccgta cctgtcgcgc
      421 ctcctcccgg gagaggagag ggatcggccc gaagcccggg atgtcggcgt cgtggtgcac
      481 cacgaacgcg ccgtcgcggg tggcgtggac atcgagctcg accccgtccg cgtcgagcat
      541 gacggcccgc cggaaggcgg cgcgggaatt ctcgtactcg tagccggaag cacctcggtg
      601 cgcgatgacg tgcggacgtc tcatgggcct aagatagccc ggcttaacaa tcggcgacac
      661 gtgacgtccg gcagcactgg atgagcgcct cccccgtgct ggtgaccccc tccgatcacg
      721 agctggcctc cgcctatcgg gccggcgacg agagggcggc ggcggagctc gtgcgacgcc
      781 acgcgcccgc actgggccgc tttctctaca gctccggcgc gccgccgggt gacatcgacg
      841 acttggtgca ggaggcgctc ttccgggcct ttcggaggct ggaggggtgg cggggtgagg
      901 cgtcgttccg cagctggctt ttcgccatcg cagggaacgt cctgcgggac gaattccggc
      961 gtcggaaggg tcgccaggtg ctgtcgctgg aggaccggga cctgcccgat cacgccgatc
     1021 cgcacgccga cctggccgcc acggaggtgg aggaggggct ccgccgaggc atcgcggcgc
     1081 tcccccgact tcagcgggag gtcttcctgc tccggacaca gcaggggtcg gggtacgtcg
     1141 agatcgctgc cgcgctcggc accacgccgg gagcggcgcg ggtgcactac catcacgcgg
     1201 tcaaacgtct caaggagctg gtgcgatgac cgactgcgaa cgcctgtccg accgcatgcc
     1261 cgaggtcgcg atggcccggg cggcgtggtc ctccgaggag gcggcccacc tcgcgagctg
     1321 caccgggtgc cggggcgaat gggacctggt gctggccgcc cgacgactgg aagcccgagc
     1381 accagtggtg gatggcgacg cgatcgcggc cgccgtccag cgccgcctca ccgcggagcg
     1441 caccgggcgc cgacgcaccc gccggctctg gaccgccgcc ggctcggccg cagcggccgc
     1501 ggccgccatc gcgatcgccg tcggcaccgg ccgcgcaccg gagccggagg cgggccccga
     1561 ggtggtggcg cagggggagg ccctggtccc gctgccggag ctcgaggggc tcgagaccgc
     1621 gcagctggat acgctgctcc aggccctcga gggcccgttg gccggatcgt ccacgctgga
     1681 gtcgtccacc atgagtgacg acgtggacgc cgaactggag cgcattctcg acaccgggga
     1741 gggctgatgc ctcgcctgct gctctgtctc ctgctgctcg gcggcacggt gaccccgctc
     1801 ctggcccagg acccgccacc cccgcacggt ggcgcgcggc tgcgggagcg gatcgagcac
     1861 cgcttcgccg agcggatccg gacggagctg gacctgaccg acgagcaggc cgcccggctc
     1921 aaggaggtcg cgaaggagaa cggcggtcgc cgtcgcgagc tgcgacggcg ggagcgggcg
     1981 ctgagcggtg ccctcgagcg gcagctggac gcgggggcac aggcggatca ggacagcgtc
     2041 gcccggctga ccagggacct gctcgacctc cgcatcgagt acgcccggac ctggcgcgag
     2101 gagatggcca agctctcgtt cctgaccccg gtgcaacggg ctcggctcat ggtgatgcgc
     2161 gatcgcctgt ttcagcgggt ccacgagatg cgggaggacc ggcgaggctt tcgccactac
     2221 ggagacgacg actagatttc aaccgtctct cctaccagga acgccgcgat gcgccgactg
     2281 cacctgctga cgctcgcctc cctcgcgctc gcggcgccag ccgcggccca gacgccggtc
     2341 gtgtatcgca ttgcggtgac cggaaccgtg gagaacggcc tggcccctta cgtcgcccgc
     2401 tcgctggagg aggcctccgc cgcgggagcg gcggccgcgt atctcgacat cgacacgccc
     2461 ggcggccggg tggacgcggc cgagcggatc tccgacgcgg tgcgtcgggc cgaccttccg
     2521 gtctatgcct tcgtgaaccc gcgcgccttc agcgccgggg ccctgatcgc gatctcggcg
     2581 aaggagatct acatgcgacc cggcgccgtc atcggtgccg ctacgccggt ggacggcgag
     2641 gggcagcggg cgccggagaa gatggtctcc gccatgcgcg ccgagttcag ggcggtggcg
     2701 gaggagcgcg gactcgaccc ccgaatcgcc gaggcgatgg tggacgaggc ggtggagatc
     2761 cccggtgtcg tgaagcaggg ccagttgctc acgctcacca gcagcgaggc gcggaaggtg
     2821 gggtatgccc gcggtgaggt gagcgacgag gcggcgctgc tcgccgccgt cggcctcgcc
     2881 ggcgcgcggg tggtcgcggt cgagcccaac tgggcggagc tggtggtccg cttcctgacc
     2941 aacccgctgg tctctccgtt gctgctctcc ctcggcatgc tcgggctggt gctggagatc
     3001 aagagcggcg ccttcggcct cggcggcctg ctgagcgtgg cctccctggg tctcttcttc
     3061 ggctccagct tcctgctcgg cctcgcaggc tgggaggagg tgctcctgct cggcctgggc
     3121 ctgatcgcgc tcgggatcga gatcttcatc ctgcccggct tcggcgtggc cggcgtgctg
     3181 ggcctggccg cgctgtccgg ggcgatggtg ctggccctga tgggcgcggc gcccaccagc
     3241 ggagacgtcg cccaagcgct cgccatcctg ggagcgagcc tggtgatcac cgccgcggtg
     3301 atctacgcct ggctgcgcca catccccaac agcgaccgct ggggcgggct cttcctgcgc
     3361 ggcgggatgg cccagtccga aggctacatc tctgcgctgc cgcgggccga tctcgtagga
     3421 caggagggcg tcgcgatcac cgatctccga cctgccggga ccgccaccat cgcgggcgaa
     3481 cgggtggacg tcgtgaccga gggggagttc gtcacccagg gaagtccggt gcgcgtgctt
     3541 cgcagcgaag ggtaccgtca tgtggtgcgc ggcgcgagct gaggccgcgc gtagtccacc
     3601 cagatcctag gagccgacgt ggacgattcg atggtcagtc tcgggatggt gctcgccctg
     3661 atcttcatcg cggtcatggt ggtggtggtc ttcttccact tcatcccctt cgggctgtgg
     3721 ctaaccgcgc tcttttccgg gatccgggtc tccttcttca cgctcttcgg catgcggttc
     3781 cgccgggtgg atccgcgggc catcgtgctt ccgctgatca gcggccacaa ggccggcatc
     3841 gcgctcaacg tgaacgacct cgaggggcat ttcctggcgg gcggcaacgt gaaccgggtg
     3901 gtgaacgcgc tgatttccgc cgacaaggcc gggatcgcgc tgacctacaa gcaggcgacc
     3961 gcgatcgacc tcgccggccg tgacgtgttc gaggcggtgc aggtgagcgt caaccccaag
     4021 gtgatcacca ccccgaaggt cgcggcgatg gcgaaggacg ggattcagct cctggccctg
     4081 gcccgggtca cggtgagggc gaacatcaac cggctggtgg gcggcgccgg ggaggagacc
     4141 atcctcgccc gggtcggtga aggcatcgtg agcaccatcg gctcggcctc ctcccacaag
     4201 gccgtgctgg agaacccgga cctcatctcc aagaccgtgc tctccaaggg cctcgatgcc
     4261 ggcacggcgt tcgagatcct ctccatcgac atcgccgacg tggacgtcgg gaagaacatc
     4321 ggcgccgagt tgcagaccga ccaggcggag gccgacaagc ggatcgcgca ggccaaggcg
     4381 gaggagcggc gcgcgctcgc cgtggcgatg gagcaggagt tcaaggcgga agggcagaag
     4441 cagcgggcgg ccgtgatcgc cgcggaggcc cagattccgc tcgcgatggc ggaggccttc
     4501 cggagcggca acctcggcgt catggactac cagcgttacc ggaacgtcca ggcggacacc
     4561 accatgcgcc aggcgatcgc gggacagggt gactccgcgc cgagcgtggg gagctagcgg
     4621 tggacttcgg cgggctgctg gtcctgggga tcgtctggct cctgttcaac ctgatcggcc
     4681 aggggaaaaa agggacgcgc ccggcgccac gaacttcgcc gcctcgcgag cccgcgccct
     4741 cgggacctgc agcgccgggc gggtcaggcg atccgacgca gcgggagggg agccgcctgg
     4801 agcaattgct gcgcgagctg gagcggaacc tcgaaggggt cgcgggcacc cagtcgccca
     4861 gcacgccccg gcttcccgtc ccgaaacgcg tcggtgcgtc ccggcttcca ccggagccga
     4921 cgccgccgga ggaagaggag gacgtcgagg agcgcgactc gctcgaggag cccgagcggg
     4981 tcatcagcct cgagaccgac gtcccgcgcc ggcagcgcgt ggcgtacgat caggacgccg
     5041 atgccgaagc gctggttcac cggcggatcg aggcggcgcg ggaccgtgac cgggcgctga
     5101 gcaaggtgga ccacaaggcg ttcgatgcac ggatccgcca ggagccggcc gagcacacgg
     5161 ccgtccgacg gtacaccgcg gctcagctac gcgatgcggt cgtgtggcgc gagatcctgg
     5221 gtccgccggt gtcggagcgg gaaccctagg gccgcaagga cggttcgaag ctcgaccggt
     5281 acaactccat ggcccgcacg atcgcctccc tggccggcgc cgcgccctcg aagcctttgg
     5341 tctccgtccg cgtcccttcc agatccttgt acacctggaa gaagtgctcg atctccttca
     5401 agtagtgccg gggaatatcc ctcaggtcgg tcagcccctc ggagtaggga tccccggtcg
     5461 gaacggccag caccttttcg tccggcacgc cgcggtccac cagatgaaac aggccgatgg
     5521 ggcgggcctc caccaggcat ccggtgaaca cgggaatggt catcagcacg agcacgtcga
     5581 gcggatcgcc gtcctcgccc agggtgcgtg gcaggaagcc gtagtcgccg gggtaatgga
     5641 ccgcgctgtg caggacacgg tcgagccgat agatgccgag cgccttg
//
LOCUS       DASUYN010000663         7556 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1091785, whole genome shotgun sequence.
ACCESSION   DASUYN010000663 DASUYN010000000
VERSION     DASUYN010000663.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7556)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7556)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7556
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1091785"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..354)
                     /locus_tag="VF061_12905"
     CDS             complement(<1..354)
                     /locus_tag="VF061_12905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670458.1"
                     /translation="MGGLCREAAVHLLLTAVVYRLAFELRFDFNTPPADVRLFWVSLP
                     LLAAIRLSVYALSGVFRAYLLHFGVQDLFTLAQAVTLSTVLFVMALVLAGLLPGLPRS
                     VIVLEWAGAIFAAAGV"
     gene            complement(447..1640)
                     /locus_tag="VF061_12910"
     CDS             complement(447..1640)
                     /locus_tag="VF061_12910"
                     /inference="COORDINATES: protein motif:HMM:NF013227.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS aminotransferase family
                     protein"
                     /protein_id="HEX6670459.1"
                     /translation="MTLTPTSTPPRSGRSSFLLFSPPSIGEEEIREVVDTLRSGWITT
                     GPKTKLFERAFRERVGAPDALALSSCTAGLHLGLLSQGVGPGDEVITSTMTFCACANA
                     IEHLGAVPVLVDVEPDTMNLDPAAVEAAITPRTRAILAVHYAGHPVELDSLRDIAERH
                     GIGLVEDAAHAVAARYKGRMIGSGENPVAFSFYATKNLTTGEGGMLTGSPEFIAEARM
                     RSLHGMSRDAWKRYGVGGSWFYDVCEPGFKYNMTDIQAALGLVQLRKLERLQRRRREV
                     VTNYNLAFHDIDALELPVQRATVDHAWHLYVLRLRLETLRIGRDQFIDELTARNIATS
                     VHFIPIHLHPFYRDKYGYTPEQFPVAYQCYQRMLSIPLHPGLSDGDVCDVVDAVLDVE
                     KRFAR"
     gene            complement(2040..4484)
                     /locus_tag="VF061_12915"
     CDS             complement(2040..4484)
                     /locus_tag="VF061_12915"
                     /inference="COORDINATES: protein motif:HMM:NF014732.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /protein_id="HEX6670460.1"
                     /translation="MPQLARHEESPLRDGITVASLLLAVRHHLLLVGVIALLTLAATA
                     FLLYRASPEYRATAVLRMASERRNLASGVDNPPAATERTVDPLLSLVQILNSRTLLGS
                     VVDTLGLQLEVLPTPLVQAVRTGGGGFSGRDLRVISIEPTGRADTLSLHFGDSLVTAI
                     ARGAHAEAPYGAPLRLNRVRFIVPAPPGVQRATLVVLSRDVAIDHVAARLKVAPRAGT
                     DVIDVRYTGPDPALAQAVVNTLARQFEAAAGRAAQKQAQRRRVFLEEQLRVTDSMLAT
                     AERNLADFRSRQQMGSSGENLSAEQATLAAIAAQRAELESDRYLFSSLLEKLEAAPAG
                     QRSEVFRALAYSPEVASDGVLSHLHQQLIDYRARLDSLTTGPYRSSPTDPDVVALNSR
                     ARATEEELVSAFRSRVSLIDTRLEMLNSRRTRTTRSVQSLPAAQAEEARHDRRVQTLQ
                     TTADALRQEHEKARIAEALEAADVEVLDLAPMPYRRTGVPRPVGLALGLVLGLFLGGG
                     TAFLAELRNRSVRRPEELQQTVGAIELAVIPRIHRAGLDSGGPRQLLGKVVGGNPAGP
                     PTELVVSKAGTVSHEAEAFRMLRTSLNFCWGQGPVTVVVTSAVPQEGKTLIAANLAAT
                     FARSGSRVLLVDSDLHRPRLHRMFRVDRSPGLTEWLSTDDVSLVPTYSFLAGAARSRE
                     VPHGPAPIRKSTIDRLSLLTAGRAVPNGSELLEPARLRARLYELQEHFDVIILDSPPV
                     LVSADAATLAASAHGVIVVVRAGNTDRGAAELAFQRLTSAGARVFGAVLNDPEEIVAR
                     FAGKRYYAYDYQPTSD"
     gene            complement(4739..5770)
                     /locus_tag="VF061_12920"
     CDS             complement(4739..5770)
                     /locus_tag="VF061_12920"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vWA domain-containing protein"
                     /protein_id="HEX6670461.1"
                     /translation="MTSTDLRHLSLPIISAAVLFVACGSESTGPDDPPDSPNLGLAIA
                     VRTDPATFQQTGEFVLELIPNTTQGQSLVAEPWDISNTVTKPSSVSPDLLSKNVTAPD
                     TSPPSLALLVDNSSSMSTNDPESLRIAAATLLWETVLQERPKGQVSLLYFGVRDSPSP
                     GFSATALLRNWTSDPADLAGALDTLSSGAGSQIYSSTLEVIRWIDSTTPEDARRVLLL
                     LTDGQLNRETNTSLEVLEAARQAGVSIGTVALGPASDRSDDPDPEAVALLQELANGSG
                     GLYSGAATPERLSSTLLSLTSPGSVGALHARFKLSPVPGAGSQVTGTVRLANESHGSV
                     SGGWSFTAP"
     gene            5926..6273
                     /locus_tag="VF061_12925"
     CDS             5926..6273
                     /locus_tag="VF061_12925"
                     /inference="COORDINATES: protein motif:HMM:NF015893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsC/Spx/MgsR family protein"
                     /protein_id="HEX6670462.1"
                     /translation="MDVQIFGTRKSPETRKALRFFAERRIRTHFVDLQERAASLGELR
                     RFVQKFGIAALVDRGSRRFADLGLGAANLSEERWLERLIEEPLLLRMPLVRRQRQLTI
                     GDAEPTWREWTGR"
     gene            6270..>7556
                     /locus_tag="VF061_12930"
     CDS             6270..>7556
                     /locus_tag="VF061_12930"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HEX6670463.1"
                     /translation="MTQLSFAGVRVEFGATRLLDDVTFTVAHGERWGIIGRNGAGKTT
                     LFRLITGELTPASGIVSRASGLRISLLDQQREFGGAATVWEAAAGPFRALLDLERSLA
                     EQAAALAEAGDRVTDQALARYDRDLERFQREDGYSLAARVDAVLHGLGFDPDDARRRP
                     LDGLSGGERGRLGLVRQLVAPADLLLLDEPTNHLDLETSRWLEGHLRQLDATVLVVSH
                     DRAFLQAVVDHVLHLEAGGTQSYTGDYEAFIRQRGERRLAEQRAFAKQSRVIAAEEDY
                     IRRNIAGQNSAQAKGRRRRLTRMSRLSAPPGEGGAMALRLAADGRGGDQVLAASAVRL
                     EIEGRTLLHDFTTRISRGEVVGLVGPNGAGKSTLLRAIVGDRAPDGGELRVPESVRIG
                     YYRQDLAQVPQDRTLYEVISGLRPSWGRGPIQGHLGR"
BASE COUNT         1186 a         2546 c         2710 g         1114 t
ORIGIN      
        1 cacccctgca gcggcgaaga tcgccccggc ccactccagg acgatgaccg agcgcgggag
       61 gcccggcagc aggccggcga gcacgagcgc catgacgaac agcaccgtgc tcagcgtaac
      121 cgcttgcgcc agggtgaaga ggtcctgcac gccgaagtgc aggaggtagg cccggaacac
      181 gccggagagg gcgtagacgg agagccgaat cgccgcgagg agcggcagcg agacccagaa
      241 gagccggacg tcggccggcg gggtgttgaa gtcgaagcgg agctcgaagg ccagacgata
      301 gaccaccgcc gtgagcagga ggtggaccgc cgcctcgcgg cacagccccc ccaccctccg
      361 ccaatccgcg cccagtccga ggttccagcc ggccgtccga agtcgaccgc cggttgcggc
      421 gatcggtgtc accaacgggc tagcgctcac cgagcgaacc tcttctccac gtccagcacc
      481 gcgtccacca cgtcgcacac gtccccgtcg ctcagcccgg ggtgcagggg aatgctgagc
      541 atgcgctggt agcactggta tgcgaccggg aactgctccg gggtgtagcc gtacttgtcg
      601 cggtagaacg gatgcaggtg gatcgggatg aagtgaaccg aggtggcgat gttcctggcg
      661 gtcagctcgt cgatgaactg gtcccggccg atccggagcg tctcgagacg aagccggaga
      721 acgtacaggt gccaggcgtg gtccaccgtc gcgcgctgga ccggaagctc gagcgcatcg
      781 atatcgtgga acgcgagatt gtagttcgtg acgacctcgc gccggcggcg ctggagccgc
      841 tccagcttgc ggagctggac cagcccgagg gccgcctgaa tatcggtcat gttgtacttg
      901 aatcccggct cgcagacgtc gtagaaccag ctccccccga cgccgtaccg cttccaggcg
      961 tcgcggctca tcccgtggag actccgcatg cgagcctccg cgatgaattc ggggctaccg
     1021 gtcagcatcc cgccctcgcc ggtcgtgaga ttcttggtgg cgtagaagct gaaggccacc
     1081 ggattctccc ccgatccgat catccgcccc ttgtatcggg ccgccaccgc gtgggccgcg
     1141 tcctcgacca gaccgatgcc gtgccgctcg gcgatatcac gaaggctgtc cagctcgacg
     1201 ggatgcccgg cgtagtggac cgccagaatg gcccgggtgc ggggcgtgat cgcggcctcc
     1261 acggcggcgg gatcgaggtt catggtgtcc ggctcgacat ccaccagcac ggggaccgcc
     1321 cccaggtgct cgatcgcgtt ggcgcaggcg cagaaggtca tcgtgctggt gatgacctcg
     1381 tcccccggtc cgaccccctg gctgaggagc cccaggtgca ggcccgcggt gcaggagctc
     1441 agcgccagcg catcgggcgc gcccacccgc tcccggaagg cgcgctcgaa cagcttggtc
     1501 ttcggcccgg tggtgatcca ccccgaacgc agggtatcca ccacctcccg gatctcttcc
     1561 tcgccgatcg aaggcggcga gaacagcagg aagctggagc gaccggaccg gggcggggtt
     1621 gaggttgggg tcagggtcaa cggcgcggca tggacacccg cgccgttgct cggccgggtg
     1681 gcgaggccgg ccttgggatc ggcgagagcc ggttcccgtc ctagagcggg cagggccccc
     1741 aggagggtgg gggcgatatc ccctctgacg gcaccggcgg ggtcggacgg agtattgatc
     1801 acaggagact gcctcagatg aaagaaacct taccgtgcgc ccaacccggc tctgccgctt
     1861 cccggacgag ccgattccgg cctcggctcc ccgtccgttg aaccgttgca cctcagtgtc
     1921 gcatgggtac ctcagaaagg gccaagggag ccagctacga ctggcttacg aggccgaagc
     1981 tcaagctgga aaaggatgaa aagacggctg gagcaaagac tgggcctagg tcgctccgct
     2041 caatcgctgg tcggttggta gtcgtaggcg tagtatctct tgcccgcgaa cctcgccacg
     2101 atctcttcag gatcgttcag gacggccccg aacacccgag cgccggcgga ggtcagccgt
     2161 tggaaggcca gttcggccgc accgcgatcg gtgtttccgg cccggacgac cacgatcacc
     2221 ccatgcgcgg acgctgcgag tgtggcggcg tcggcgctga cgagcaccgg cggagaatcg
     2281 aggatgatga cgtcgaagtg ctcctgcagc tcgtacaacc gggctcggag tctcgcgggc
     2341 tccagcagct ccgagccatt ggggaccgcc ctgccggccg tgaggaggct gagccggtcg
     2401 atcgtggatt tccggatcgg cgcgggcccg tggggcactt cccgggagcg agcggcgccg
     2461 gccaggaacg agtacgtcgg caccaggctc acgtcatcgg tggacagcca ctccgtcagg
     2521 ccgggtgagc ggtccacccg aaacatccgg tgcagtcgtg gccgatgcag gtcggagtcg
     2581 accaggagca cgcgcgagcc gctgcgggcg aacgtggcgg ccaggttggc cgcgatcagg
     2641 gtcttgccct cctgaggcac cgcgctggtc accaccaccg tgaccggccc ctgtccccag
     2701 cagaagttca ggctggtccg gagcatccga aatgcctcgg cctcgtgcga caccgtgccg
     2761 gccttgctga ccactagctc ggtgggagga ccggcagggt tgcccccgac cacctttccc
     2821 aacaactggc gcgggccgcc cgagtcgagg ccggcacggt gaatcctggg aatgacggcc
     2881 agctcgatcg ctccgaccgt ctgctgcagc tcctccggcc ggcgaaccga tcggttcctc
     2941 aactcggcca gaaacgcggt gcccccgccc aggaacagcc cgagcacaag tcccaaggcg
     3001 agccccacgg ggcgggggac gccggttcgc cggtacggca tgggggccag gtcgagcacc
     3061 tcgacgtccg cggcctcgag cgcctcggca atccgggcct tctcgtgctc ctggcgcagc
     3121 gcatccgccg tcgtctggag cgtctgcacc cggcggtcgt gtcgggcctc ctccgcctgg
     3181 gcggccggca ggctctgcac cgaccgggtc gtgcgggtcc gccggctgtt caacatctcc
     3241 aggcgcgtat cgatcagact gacccgggac ctgaaggcgg agaccagctc ctcctccgtt
     3301 gcccgggcgc gcgagttgag cgccacgacg tcggggtcgg tcggcgagct ccggtacggc
     3361 ccggtggtca gggagtccag gcgcgcgcga tagtcgatca gctgctgatg gaggtggctg
     3421 agcaccccgt cgctcgcgac ctcgggggag taggccaggg cgcggaagac ctccgaccgc
     3481 tggcccgcgg gcgcggcctc cagtttctcc aacagcgacg agaacaggta ccggtcggac
     3541 tcgagctcgg cgcgctgggc ggcgatggcc gccagcgtgg cctgctccgc cgagaggttc
     3601 tcccccgagc tgcccatctg ctgccgactc cggaagtcgg cgaggttccg ctcggccgtg
     3661 gccagcatcg agtcggtgac ccgaagctgt tcttccagga agacccgacg ccgttgagcc
     3721 tgcttctgag ccgcgcgccc ggccgcggcc tcgaattgcc gcgccagggt gttgaccacc
     3781 gcctgggcga gcgccgggtc gggaccggta tatcgaacgt cgatcacgtc ggtgcccgca
     3841 cggggcgcga ccttcagcct ggccgccaca tggtcgatgg ccacgtcgcg gctgaggacc
     3901 accagcgtgg cccgctggac tccgggcggc gccggaacga tgaagcgcac gcgattgaga
     3961 cggagcggcg ccccgtaggg agcctcggca tgggcacctc tggcgatcgc cgtgacgagg
     4021 ctgtcgccaa agtgcagcga gagcgtgtcg gcccgcccgg tcggttcgat cgagatcacg
     4081 cggaggtccc ggccggagaa cccaccgccg ccggttcgga ccgcctggac gagcggggtc
     4141 gggagcacct caagctggag ccccagggta tcgaccacgg aacccaggag ggtgcggctg
     4201 ttcaggatct ggaccaggga caggagcggg tcgacggtcc gctccgtcgc cgcaggcggg
     4261 ttgtcgactc cgctggccag gttccgccgc tcgctggcca tgcggagcac ggcggtcgcc
     4321 cgatattcgg ggctcgcgcg atagagcaga aacgcggttg ccgccagcgt gaggagcgcg
     4381 atgacgccca ccagcaggag gtggtgccgc acggcgagca acaggctggc gacggtaatg
     4441 ccgtcacgaa ggggtgattc ctcgtgacgc gcgagctgcg gcacaggacc aggagcgcct
     4501 gaacgggtat cgcgaggcgg gaagagcggt tccggcggct gctctgtcat gtgctcaggc
     4561 tgcccttacc agcaggtggg cgaaaggggt tttcgggcaa gctcgaccgc ccggccatca
     4621 cagtggacta gtcgagaatg atgccgggcc ggggcaggcg gttgtgccgg ttggttctcg
     4681 atatagtaca ggccggcccg gactcccgca acatcgcgaa gctgctccca gggcgcggtc
     4741 atggcgcggt gaacgaccag cctccgctga ccgacccatg gctctcgttc gccagcctga
     4801 ccgtgccggt tacctggctc ccggctcccg gaacgggcga gagcttgaac cgggcgtgga
     4861 gtgctccgac cgagccgggg gaggtcaggg agagtagcgt ggaagagagc cgctccggcg
     4921 tggcggcccc tgagtagagc ccaccggagc cgttggcgag ctcctgcagc agcgcgaccg
     4981 cctccggatc gggatcgtcg ctgcgatcgg acgccggacc cagggcgacc gtgccgatgc
     5041 tcactccggc ctgccgggcc gcttccaaca cctccaagct ggtgttggtc tcgcggttga
     5101 gttggccgtc ggtgagcagc aggagcacgc ggcgcgcgtc ctccggcgtc gtgctgtcga
     5161 tccaccgtat gacttccagc gtcgacgaat agatctggga cccggcgccg ctggaaagcg
     5221 tgtccagagc gcccgccagg tcggcgggat cggaggtcca gttccgcagc agcgcggtcg
     5281 cgctgaagcc gggcgatggc gagtcacgaa cgccgaagta caacaatgat acctggcctt
     5341 tggggcgttc ctgcaacact gtctcccaca gcagtgtcgc ggcggcgatg cgcagactct
     5401 ccgggtcgtt ggtcgacatc gagctagaat tgtccaccag cagcgctagg ctcggcgggg
     5461 aggtgtcggg tgctgtcaca ttcttcgaca ggaggtccgg agacaccgag gagggcttgg
     5521 ttaccgtgtt ggagatgtcc catggctcgg cgaccaagct ctggccctgc gtggtgttcg
     5581 gaatcaactc cagcacgaac tcgccggtct gctgaaacgt ggccggatcg gttcgcaccg
     5641 cgatggcgag acccaggttc ggcgagtcgg ggggatcgtc cgggccggtg ctctcgctcc
     5701 cgcatgcgac gaacagcacg gccgcggaga tgatcggcag cgacaggtgt cggaggtcgg
     5761 ttgatgtcat gaggtccggg gggacgcaag ttcagcgccg cgcgctcggc gccttcgagt
     5821 gaagtgatca gacggcccca ggatctgtcg ccctcccgga gacggcgcaa gcggtgcatc
     5881 ggcttgcagg tcggtgcatg ccggtggcgg tgtagattgg gcgccatgga cgtccagatc
     5941 ttcggcaccc gaaagagccc cgagacccgc aaggccctcc gcttcttcgc cgagcgccgg
     6001 atcaggactc acttcgtgga tctgcaggag cgggccgcct ctctcggaga gctccgtcgc
     6061 ttcgtccaga agttcggcat tgcggcgctg gtggaccgcg gctcccgccg cttcgccgac
     6121 ctggggctcg gcgccgccaa cctgagcgag gagcgctggc tcgagaggct gatcgaggag
     6181 ccgctcctcc tgcggatgcc gctggtccgc cgccagcggc agctcacgat cggcgacgcc
     6241 gagccgacct ggcgggagtg gaccggccgt tgacccagct ctccttcgcc ggcgtgcggg
     6301 tggagttcgg cgccaccagg ctgctcgacg acgtgacctt caccgtggcc cacggcgagc
     6361 gctggggcat catcggccgg aacggggcgg ggaagaccac gctcttccgg ctgatcaccg
     6421 gcgagctgac gccggcctcg ggtatcgttt cccgtgcctc cggactccgc atatctctcc
     6481 tggaccagca gcgcgagttc ggcggtgccg ccaccgtctg ggaggcggcc gctgggccct
     6541 tccgcgcgct gctcgacctg gagcgctccc tcgcggagca ggccgccgct ctggccgagg
     6601 ccggagaccg ggtcaccgac caggcgctcg ctcgctacga ccgggacctg gagcgcttcc
     6661 agcgcgagga cgggtacagc ctcgcggccc gggtggacgc ggtgctgcac gggcttggct
     6721 tcgatcccga cgacgcccgg cggcgcccgc tcgacggact gagcggcggc gagcgcgggc
     6781 ggctcggact cgtgcgccag ttggtcgcgc cggccgacct cctgctcctg gacgagccca
     6841 ccaaccacct cgacctggag acctctcggt ggctggaagg ccatctccgc cagctggacg
     6901 cgaccgtgct ggtggtgagc cacgaccgcg ccttcctcca ggcggtcgtg gaccacgtgc
     6961 tgcacctcga ggccggcggc acccagtcgt acaccgggga ctacgaggcc ttcatccgcc
     7021 agcgcggcga gcggcggctc gcggagcagc gggcgttcgc caagcagtcg cgggtgatcg
     7081 cggccgaaga ggattacatc cgccgtaaca tcgccggaca gaacagcgcc caggccaagg
     7141 ggcggcggcg gcgcctgacg cgaatgagcc gtctgagcgc tcccccgggc gaagggggtg
     7201 cgatggccct ccgcctcgcg gccgacgggc gcggcgggga tcaggtcctg gcagccagcg
     7261 cggtgcggct ggagatcgag ggccgtacgc tgctgcacga ctttaccacc cggatcagcc
     7321 gcggggaggt ggtcggtctg gtcgggccga acggcgcggg caagtccacc ctgctgcgcg
     7381 ccatcgtggg cgaccgcgcg ccggacgggg gagagctccg ggtccccgag tcggtgcgca
     7441 tcgggtatta ccggcaggat ctcgcccagg taccgcagga ccggacgctc tacgaggtca
     7501 tctccggtct ccggccgtcc tggggccggg ggccgatcca ggggcacctc ggccgg
//
LOCUS       DASUYN010000664         6771 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_432267, whole genome shotgun sequence.
ACCESSION   DASUYN010000664 DASUYN010000000
VERSION     DASUYN010000664.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6771)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6771)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6771
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_432267"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(12..449)
                     /locus_tag="VF061_12935"
     CDS             complement(12..449)
                     /locus_tag="VF061_12935"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF024675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HEX6670464.1"
                     /translation="MRVNYSETDQMGVVYHARYLVWLDIARTEHLRLSGMSYRELEEA
                     GLRLAVSEVSVRYRLPARYDDRVRIRCWVRDLASRRIDFGYVLEHADDDRLLATAFTS
                     LLALDRDLNLTRFPEAVRRAMRSVPDPVNLQLSAERRRPPIHG"
     gene            573..1340
                     /locus_tag="VF061_12940"
     CDS             573..1340
                     /locus_tag="VF061_12940"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008758 - UDP-2,3-diacylglucosamine
                     hydrolase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HEX6670465.1"
                     /translation="MPGHTLVVVSDAHLGVTPPAVEQALLAFFDAVPTLGDCLLINGD
                     LFDFWFSYSRVVPRRGFQVAAAIAGLARRMPVLMVGGNHDRWGGDFWSRDLGLRFDPY
                     RLTFRLGRVGVAAVHGDGVAEGRRRARMLHRLIHHPATSAIYRALHPELGFRLVEALS
                     PHLGDQGAHDARLEAAAAHQRAWAAELLAREPEIGLVIMGHTHRPELSRTPGGGTYLN
                     PGAWFEGLRYAVATEDGAELRQFTPAAPPRPGPAGPR"
     gene            complement(1294..2094)
                     /gene="murI"
                     /locus_tag="VF061_12945"
     CDS             complement(1294..2094)
                     /gene="murI"
                     /locus_tag="VF061_12945"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008881 - glutamate racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HEX6670466.1"
                     /translation="MNRSPIGIFDSGIGGLTVARAVFEQLPRESTVYFGDTARVPYGP
                     KSPETVRRYSLEILRWLLDQRVKAVVIACNTSTAHALETLQAESPVPVIGVIEPGARA
                     AASQGNGRPVGVIGTAGTIASNAYAKAIRRIRADARVEQKACPLFVPLVEEGWFEHPA
                     ADLIAREYLAPLSAAGVGSLVLGCTHYPLLRPLLQRVMGSDVRLIDSGEETARVVASV
                     VRERGLEAPEGAAVSHRFVVSDDEARFRQVGARFIGDRLDRAEVVPLG"
     gene            complement(2091..2591)
                     /locus_tag="VF061_12950"
     CDS             complement(2091..2591)
                     /locus_tag="VF061_12950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670467.1"
                     /translation="MSQPRALTLAVLLLAAGAAPRFLLAQDTTAVPAVEPDVGPEPPG
                     SAFRPISPINAFWRSFLLPGWGQARLNRKLTGGIFIAWEGVTLGMSLKTRHELAYLRR
                     TRSARGDNKRREHEDWLVLLAFNHLFAGLEAYVGAHLADFPGDLRIRAVPGGLGASMS
                     VPLRLR"
     gene            complement(2631..2728)
                     /locus_tag="VF061_12955"
     tRNA            complement(2631..2728)
                     /locus_tag="VF061_12955"
                     /product="tRNA-Sec"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2692..2694),aa:Sec,seq:tca)
     gene            2903..4792
                     /locus_tag="VF061_12960"
     CDS             2903..4792
                     /locus_tag="VF061_12960"
                     /inference="COORDINATES: protein motif:HMM:NF012356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 13 protein"
                     /protein_id="HEX6670468.1"
                     /translation="MKRSHAALTGLLLAAGCGTTPPGPAAANLDVPAWAGDAIWYQIF
                     VERFRNGDPSNDPTAHDIHGVTDEPAPEGWRPTPWTWDWYRQEPWAAATGKDFYATVQ
                     FRRYGGDLQGVLDRLDYLQALGVTALYLNPVNDAPSLHKYDARNYHHIDRNYGPDPRG
                     DERRIAAEDPTEPATWGWTAADSLFLALVGEVHRRGMRVIVDYSWNHTGITFWAWQDV
                     LKRQGESPYTDWYAIEALDDPATPDTNEFRYRGWLGVPWLPEWRKIDRPAGKTHGAID
                     GTLVPEVRDLVFDVTRRWLDPNGDGDPSDGVDGFRLDVAEMVPLGFWREYRRFVRGIN
                     PEAYLVGEVWWESWPDRMYDPAPWLQGDVFDAVMNYRWFLPTRAFFSGAPPALTASAY
                     AASLDSLAGGIAPGHVKVMMNLTASHDTPRFGTSIYNPGRYKYHNTPREDPDYRVDRP
                     DARTRLTQELILVQQFTFVGAPHIWNGDEVGMWGADDPDDRKPVVWSDLKHEREATHP
                     FGRARRPDPVAPDTALFRVHQELIRLRKRHLRLFVDGSLSWLRTDDTSGLLAYERVLG
                     EERAVVAFNVSDATRELGVKADGEYSEAYPEEGPVVAADGELRVRLPPRSARVWIAAR
                     GRTGS"
     gene            complement(4725..6437)
                     /locus_tag="VF061_12965"
     CDS             complement(4725..6437)
                     /locus_tag="VF061_12965"
                     /inference="COORDINATES: protein motif:HMM:NF012356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HEX6670469.1"
                     /translation="MARRAALLGLIVLAAGPACAGRGETGAPRPRPEGTTVPVAAADF
                     WNGATVYFLLTDRFENGHAGNDVALDRRRDGAVLRSFEGGDLAGLRRRIEEGWFDSLG
                     VHAIWLTPFVEQIHGSVDEGTGKTYPFHGYWTRDWTAVDPSLGTAEDLRAVVHAAHAR
                     GIRMLMDAVINHTGPVTPSDPAWPGDWVRTGPNCSYRSYATTVECTLVTTLPDFRTES
                     DEEVELPTALLEKWEREGRRERELTELDAFFRRTGHPRAPRYYLMKWLTDWVRELGFD
                     GYRVDTAKHFDESVSAELKREAEAALAEWRRRHPDRVPGDLPFYMMGEVYGWELGHGR
                     EYDFGDRKVDFFAHGYDGLINFAFKRDAGSPPDSLFTAYAAALRGPLAGVAVLNYISS
                     HDDGSPYDADREDPLGAATRLLLAPGGAQIYYGDELARPLRVRGAEGDANLRSFMNWD
                     DLADPGIASEVLRHWRRLGRFRRDHPAVGAGEHRTHRASPYIFSRTLETGQGVDRVLV
                     AMDQGAGAKSIPVFDLFPAGTELVDAYSGARATVRGGTVSITSRSGLVLLSTPAPSGA
                     AAGP"
     gene            complement(6407..>6771)
                     /locus_tag="VF061_12970"
     CDS             complement(6407..>6771)
                     /locus_tag="VF061_12970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670470.1"
                     /translation="LGLLSIVLLREPRLLLASMVGVGIAWASILAMPYAILTGSLPPS
                     KMGYYMGVFNFFIVIPQIVAAALLGFFVGRFFDGQSIYALAIGGASLLLAAGLTLRVE
                     DRDDVEAEAWHGELPSSA"
BASE COUNT         1041 a         2367 c         2412 g          951 t
ORIGIN      
        1 ggcggaagag ctcagccatg gatgggcggt ctccgccgct cggcggaaag ctggaggttc
       61 acgggatcgg gaacggaccg catcgctcgc cgcacggcct cgggaaagcg ggtcaggttc
      121 aggtcgcggt cgagggccaa gagcgaggtg aaggcggtgg cgagcaggcg gtcgtcgtcc
      181 gcgtgctcca ggacgtagcc gaaatcgatc cgtctggacg cgaggtcgcg cacccagcag
      241 cggatccgga cccggtcgtc gtagcgggcc ggcaagcggt agcgcaccga gacctcgctc
      301 accgcgagcc gcagacccgc ttcctccaat tcccgatagc tcatgccgga gaggcggagg
      361 tgctcggtgc gggcgatgtc gagccagacc aggtagcgcg cgtggtagac gacgcccatc
      421 tggtccgtct cggagtagtt caccctcacg acaatctccg atacgtcggg ggagcgcgcc
      481 gaggacctca cgggtagacg ctcggaaggg cccggcagtg acatccggcg acccggttgc
      541 ggcctcccgg ggcggaaccc atctttggcc ccgtgccggg gcacaccctc gtcgtcgttt
      601 cggacgccca tctcggcgtg acaccacctg ccgtcgagca ggcgctgctc gccttcttcg
      661 atgccgtgcc cacgctgggc gactgcctgc tgatcaacgg cgacctcttc gatttctggt
      721 tctcctactc ccgcgtcgta ccccggcgcg gcttccaggt cgcggcggcg atcgcggggc
      781 tggcgcgccg gatgccggtc ctgatggtgg gcggcaatca cgaccggtgg ggcggcgatt
      841 tctggagccg cgacctcggg ctccgcttcg acccctaccg cctcaccttc cggctcggcc
      901 gggtcggcgt cgccgcggtg cacggcgacg gcgtggcgga gggacgccgg cgcgccagga
      961 tgctgcaccg cctgatccac caccccgcca cctccgcgat ctaccgggcg ctgcaccccg
     1021 agctcggctt ccgcctggtg gaagccctga gcccgcacct gggagaccag ggtgcgcacg
     1081 acgcgcggct ggaggcggcc gccgcccacc agcgcgcctg ggcggcggag ctgctggcgc
     1141 gggagcccga gatcggcctg gtcatcatgg ggcacacgca ccggccggag ctctcgcgga
     1201 cgccgggggg cggaacctat ctcaatcccg gcgcctggtt cgaggggttg cgctacgcag
     1261 tggcgaccga agacggggcc gagctccggc agttcacccc agcggcacca cctcggcccg
     1321 gtccagccgg tccccgatga atctcgcgcc cacctgacgg aagcgggcct cgtcatcgct
     1381 cacgacgaag cggtgggaga cggccgcccc ctcgggagcc tccagccccc gctcgcgcac
     1441 caccgaggcc acgacccgcg cggtctcctc tccgctgtcg atcagccgca cgtccgagcc
     1501 catgacgcgc tggagcagcg gccgcagcag cggatagtgc gtgcagccca gcacgaggga
     1561 acccacgccc gcggcgctga ggggggcgag gtactccctg gcgatcaggt cggcggcggg
     1621 atgctcgaac cagccctcct ccaccaacgg cacgaagagc gggcaagcct tctgctccac
     1681 ccgcgcgtcg gcccggatac gtcggatggc cttggcgtag gcattgctcg cgatggtgcc
     1741 cgccgtgccg atcactccca cgggacgtcc gtttccctga ctcgcggcgg ccctcgcgcc
     1801 cggctcgatc acgccgatca ccggcaccgg cgactcggcc tgcagcgtct ccagcgcgtg
     1861 ggccgtgctg gtgttgcagg cgatcacgac ggccttgacc cgctggtcca gcagccagcg
     1921 caggatctcc aggctgtagc gccggaccgt ctccggtgac ttggggccgt agggcacccg
     1981 ggccgtgtct ccgaaataga ccgtggactc acgggggagc tgctcgaaga cggcgcgggc
     2041 gacggtgagc cccccgatgc cggagtcgaa gatgccgatg ggcgagcgat tcatcggagg
     2101 cggagcggca cgctcatcga ggcccccagg ccgccgggca ccgcacgaat gcggaggtcg
     2161 ccgggaaagt ccgccaggtg ggcgccgacg taggcctcga ggccggcgaa caggtgattg
     2221 aaggcgagga ggaccagcca gtcctcgtgc tcccgccgct tgttgtcgcc tcgggcggaa
     2281 cgggtgcggc ggaggtaggc cagctcgtgc cgggtcttga ggctcatccc cagggtgacc
     2341 ccctcccacg cgatgaagat gccgccggtg agcttccggt tgagccgcgc ctgtccccac
     2401 ccgggcaaca ggaaggagcg ccagaacgcg ttgatcgggc tgatgggccg aaacgcgctg
     2461 ccgggcggct ccggcccgac atcgggctcg acggccggca cggcggtggt gtcctgggcg
     2521 agaaggaagc gcggcgcggc tcccgcggcg agcaggagaa ccgcaagcgt cagggcacgc
     2581 ggctgggaca cgtcccggga agctccggcg tcggtgtgga cgggggcgaa tggcgggagc
     2641 gtgtgggaat cgaacccacc ggagccgccg gaggcgcctc cgtcgcggtt ttgaagaccg
     2701 gccagaccac caggcccgat ccgctccctg gcaccatcga gtgcatggag tatagcggag
     2761 ccgggtccgg ggccgaagcg acgtccttgc cctccggctg cggctggggt tttcgtggga
     2821 cccgagggtc agccggtggg tgaaaccatc tccactcggg cacgatgcgg tgccgggaga
     2881 cgcgcatgat gccggggaag tcgtgaagcg ctcgcatgcg gccctcacgg gtctcctgct
     2941 cgccgccgga tgcggcacca cgccaccggg cccggcggcc gccaatctcg acgtgcccgc
     3001 atgggcggga gacgcgattt ggtaccagat cttcgtcgag cgcttccgca acggcgaccc
     3061 gtcgaacgat cccaccgcgc acgacatcca cggggtgacc gacgagccgg cgcccgaggg
     3121 ctggcgcccg acgccgtgga cctgggactg gtatcggcag gagccgtggg ccgccgccac
     3181 cggcaaggac ttctacgcca cggtgcagtt ccgccgctac gggggcgacc tccagggcgt
     3241 cctcgaccgg ctcgactacc tgcaggcgct cggcgtcacg gccctctatc tcaacccggt
     3301 caacgacgct ccctctctgc acaagtacga cgcgcgcaac taccaccaca tcgaccgcaa
     3361 ctacgggccc gacccccggg gcgacgagcg gcgcatcgcc gcggaagacc ccaccgaacc
     3421 cgccacctgg ggctggaccg ccgcggacag cctgttcctc gctctggtcg gcgaggtcca
     3481 tcgccgcggc atgcgcgtca tcgtggacta ttcctggaac cacacgggga tcacgttctg
     3541 ggcctggcag gacgtgctca aacgtcaggg ggagtcgccc tacacggact ggtacgcgat
     3601 cgaggcgctc gacgaccccg cgacgcccga cacgaacgag ttccgctatc gcggctggct
     3661 gggcgtgccg tggctgccgg agtggaggaa gatcgatcgc cccgccggga agacgcacgg
     3721 ggcgatcgac gggaccctgg tgccggaggt gcgcgacctg gtcttcgacg tcacccgccg
     3781 gtggctggat cccaacggcg acggggatcc gtccgacggc gtggacggct tccgcctcga
     3841 tgtggccgag atggtgccgc tcggcttctg gcgcgagtac cggcgattcg tgcggggcat
     3901 caatcccgaa gcgtacctgg tcggagaggt ctggtgggaa tcctggcccg accggatgta
     3961 cgaccccgcg ccctggctcc agggcgacgt gttcgacgcg gtgatgaact accgctggtt
     4021 cctcccgacc cgcgccttct tctccggggc gccgccggcc ctgaccgcct cggcctatgc
     4081 cgcgagcctc gactcgctgg cgggcggcat cgcaccgggg cacgtgaagg tgatgatgaa
     4141 cctgacggcg agccacgaca ccccacggtt cggtacgtcc atctacaatc ccgggcggta
     4201 caagtaccac aacaccccgc gcgaggatcc ggactaccgg gtcgaccggc cggacgctcg
     4261 cacccgactg acccaggagc tgatcctggt gcagcagttc accttcgtcg gggcgccaca
     4321 catctggaat ggtgacgagg tcggcatgtg gggggccgac gatcccgatg accggaagcc
     4381 ggtcgtgtgg tccgacctga agcatgagcg ggaggccacc catcccttcg gtcgcgcgcg
     4441 ccggcccgat ccggtggcgc ccgacacggc actcttccgg gtgcaccagg agctcatccg
     4501 cctccggaag cgacatctcc ggctgttcgt ggacggcagc ttgagctggc tgcgcaccga
     4561 cgacacgagc gggctgctgg cgtacgagcg ggtgctgggc gaggagcgcg ccgtggtggc
     4621 gttcaacgtc tcggacgcga cccgcgagct cggggtgaag gccgacggtg agtacagcga
     4681 ggcttatccg gaggaggggc ccgtcgtggc ggccgacggt gagctcaggg tccggctgcc
     4741 gccccgctcg gcgcgggtgt ggatagcagc acgaggccgg accggctcgt gatcgacacg
     4801 gtgccgccac ggaccgtcgc ccgtgctccc gaataggcgt ccaccagctc ggtccccgcg
     4861 gggaagaggt cgaacacggg aatgctcttg gcccctgcac cctgatccat ggccaccagg
     4921 acccgatcca cgccctgccc ggtctcgagg gtacggctga agatgtaggg gctcgcccga
     4981 tgggtgcggt gctcacccgc gccgaccgcc ggatgatcgc ggcggaaccg gccgagcctg
     5041 cgccagtgcc gcaggacctc gctcgcgatg cccgggtccg ccaggtcgtc ccagttcatg
     5101 aacgagcgca ggttggcgtc gccctcggcg ccgcgcactc gcagcgggcg cgccagctcg
     5161 tccccatagt agatctgcgc tccgccgggg gcgagcagga gccgggtcgc ggcgccgagc
     5221 ggatcctctc ggtccgcgtc gtagggcgag ccgtcgtcgt gagagctgat gtagttgagg
     5281 accgcgacac cggccagcgg cccccgcaga gcggcggcgt aggcggtgaa gaggctgtcc
     5341 ggaggggagc cggcgtcgcg cttgaaggcg aagttgatca acccgtcgta cccgtgggcg
     5401 aagaagtcca ccttccggtc gccgaagtcg tactcccgcc cgtggcccag ctcccacccg
     5461 tacacttcgc ccatcatgta gaacgggagg tcgcccggca cgcgatcggg atgcctccgc
     5521 cgccactccg ccagcgccgc ctcggcctcg cgcttcagct cggcgctgac ggactcgtcg
     5581 aagtgcttcg cggtatccac ccggtagccg tcgaaaccca gctcgcgcac ccagtcggta
     5641 agccacttca tgaggtaata ccgaggggcg cggggatgac cggtacggcg aaagaaggcg
     5701 tcgagctccg tcagctctcg ctcgcggcgc ccttcccgtt cccacttctc cagcagcgcg
     5761 gtcgggagct cgacctcctc gtccgactcg gtgcgaaagt cggggagcgt ggtcacgagg
     5821 gtgcactcca ctgtcgtggc gtagctgcga tagctgcagt tggggccggt gcgcacccag
     5881 tcgccgggcc aggcggggtc actgggggtg acgggcccgg tgtggttgat gacggcgtcc
     5941 atcagcatcc ggatcccgcg agcgtgcgcg gcgtgcacca cggcgcggag gtcctcggcc
     6001 gtgcctaggg aagggtccac cgcggtccag tcgcgggtcc agtacccgtg gaagggatag
     6061 gtctttcccg tcccctcgtc cacgctgcca tggatctgct ccacgaaggg tgtcagccag
     6121 atggcgtgca cgccgaggct gtcgaaccag ccctcctcga tgcgccggcg caggcccgcg
     6181 agatcgccac cttcgaagct gcgaagcacc gcgccgtccc gccggcggtc gagggcgacg
     6241 tcgttgccgg cgtgcccgtt ctcgaagcgg tcggtgagga ggaaatagac ggttgcgccg
     6301 ttccaaaagt ccgcggcggc caccgggaca gtcgttcctt ccggccgggg ccggggtgcg
     6361 ccggtctcac cccggccggc gcaggccgga ccggccgcga ggacgatcag gccgaggagg
     6421 gcagctcgcc gtgccatgct tcggcctcca cgtcgtcccg gtcctccact cgcaaggtga
     6481 gccccgccgc caggagcagc gacgcgccgc cgatcgcgag ggcgtagatc gactgaccgt
     6541 cgaagaaccg gccgacgaag aacccgagca gtgcggcggc gacgatctgg gggatcacga
     6601 tgaagaaatt gaagacgccc atgtaatagc ccatcttgga cggcggcagc gaaccggtga
     6661 ggatcgcgta gggcatggcg agaatgctgg cccacgcgat ccccacgccc accatggagg
     6721 ccagcagcag ccggggctcg cgcagcagca caatggacag cagccccagg g
//
LOCUS       DASUYN010000665         4216 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1092258, whole genome shotgun sequence.
ACCESSION   DASUYN010000665 DASUYN010000000
VERSION     DASUYN010000665.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4216)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4216)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4216
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1092258"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..475
                     /locus_tag="VF061_12975"
     CDS             <1..475
                     /locus_tag="VF061_12975"
                     /EC_number="1.-.-.-"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: protein motif:HMM:NF013412.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEX6670471.1"
                     /translation="YIQRRSVEGEGPGAPPRLVGRSAGLGEAHRRWIRAADTFFVATA
                     NPGEGADASHRGGAPGFISAEGDRLVWPDYAGNMMYNTLGNIAAHPRAGVVIPDFRTG
                     AVLQLTGRARILWDGGGMAGAERRVELEVEDVVEIAGLLPTAEAVEYSPFNPSQT"
     gene            complement(466..2103)
                     /locus_tag="VF061_12980"
     CDS             complement(466..2103)
                     /locus_tag="VF061_12980"
                     /EC_number="1.1.1.38"
                     /inference="COORDINATES: protein motif:HMM:NF010052.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004470 - malic enzyme activity [Evidence
                     IEA];
                     GO_function: GO:0004471 - malate dehydrogenase
                     (decarboxylating) (NAD+) activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent malic enzyme"
                     /protein_id="HEX6670472.1"
                     /translation="MRPRTPSKRGLDLLQDPRLNKGTAFTPEERAALGLEGLLPPRVF
                     TIEEQLGRVMENFRAKASDLERYVYMVALQDRNETLFYRTVVDHLPEMMPIIYTPTVG
                     EACARFGHIFRRPRGLYLSARHRGRVAEVLRNWPEREVGVIVVTDGERILGLGDLGSY
                     GMGIPIGKLALYTACGGIRPSLCLPVMLDVGTNNAGLLGDPLYTGLREPRLRGAEYAS
                     LVDEFMTAVGRVFPGVLVQFEDFATDNALGLLARYRDQACAFNDDIQGTAAVTLAALK
                     VSGRVTGRGLADERLLFLGAGAAAIGISDLTVTALRRAGLDEAEAARRVWMFDASGLV
                     VKDRTGLPEGRRRYAHAHVPVAGLADAIRGLRPTALIGVTGQPRLFTAEVLQAMAEVN
                     ERPLVFALSNPTSRAECTAEEAYRHTGGRAIFSSGSPCTPVEVDGRRFAPSQTNNAYV
                     FPGLGLAVTATGARRVADSMLLAAADALAEQTDQSLIPEGGLLPPLGRIRDVSLRIAL
                     AVARVAIDAGLAGREVPAELEPYLRDRMYRPAYRDYV"
     gene            complement(2103..3530)
                     /locus_tag="VF061_12985"
     CDS             complement(2103..3530)
                     /locus_tag="VF061_12985"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX6670473.1"
                     /translation="MHFRSVLPTVLLSVSAGTLAAQRPDSLSEEVRRYVALDTNTVVL
                     SNVLLIDGTGGAPRPGHTVIIRDGKIAAVGPSGSVRPPAGAHTMDLAGHTLIPGIVGM
                     HDHMFYTAAGGRAVQMSYTGPRLYLGSGVTTIRTTGGRSPYAEINVRQSIDGGLTPGP
                     RIHLTAPYITGTEGGGSMAVVSSPEAARRFVAYWAAEGATWIKAYTDIRRAELAATIK
                     EAHKRKVKVTGHLCSVSFREAVALGIDNLEHGMLTASDFDPGKQPDVCPVEQVGELGR
                     SDPSGETARDVIATMVKHKVSMTSTLAVYEPFVANRPTSDARTLEAMTPALRETYLQI
                     RHQIDSSGSGPVAEEGLKRAMAFERAFVAAGGLLGAGVDPTGIGGALAGYGDQRNYEL
                     LIEAGFTPAQAVQIMTANGARILGVERQLGTVERGKLADLVVLKGDLAGDPSAIRSPT
                     IVFKDGVGYDPAKLLASIQGRVGID"
     gene            complement(3560..>4216)
                     /locus_tag="VF061_12990"
     CDS             complement(3560..>4216)
                     /locus_tag="VF061_12990"
                     /inference="COORDINATES: protein motif:HMM:NF019351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HEX6670474.1"
                     /translation="GLDHLYGKFFAEADTLGVVNVGGERPDAAPARAFDALRTDPAAA
                     AELERFRRGADEAREEALILTLETRDLPAVTRRLMQLDSIYFSPMEWSGTMPMMNWAS
                     TGRQVRWILRDPATGRENMEVAWRFRRGEPVRIRLVNERRSFHAMQHPIHLHGQRFLV
                     LSVNGVPDEHPVWKDTVLLPAGAAVDILLDPSNPGRWMLHCHIAEHLSADMMTRFDVE
                     "
BASE COUNT          601 a         1492 c         1516 g          607 t
ORIGIN      
        1 gtacatccag cgccgctcgg tcgagggcga ggggccgggc gccccgccgc ggctggtggg
       61 tcgctccgcc ggcctcggtg aggcacaccg gcggtggatt cgggcggccg acacgttctt
      121 cgtggcgacc gccaaccccg gcgagggtgc ggatgcgtcg caccgcggcg gcgcacccgg
      181 cttcatctcg gcggagggcg atcgcctggt ctggccggac tacgccggca acatgatgta
      241 caacacgctg gggaacatcg ccgcgcatcc gcgggccggt gtggtgatac cggatttccg
      301 caccggggcc gtgctccagc tgaccggccg ggcccggatt ctctgggatg gaggcggcat
      361 ggccggggcc gagcgccggg tggagctgga ggtcgaggac gtggtggaga tcgcggggct
      421 gctgccgacc gcggaagcag tggagtactc gcccttcaac ccgtctcaga cgtagtcacg
      481 gtacgccggc cggtacatcc ggtcgcgcag gtacggctcc agctccgccg ggacctcgcg
      541 gcccgccagg ccggcatcga tcgcaacgcg cgcgacggcg agggcgattc ggagcgacac
      601 gtcccggatc cgccccagcg gggggaggag accgccctcg gggatcagac tctggtccgt
      661 ctgctccgcg agcgcgtccg cggccgcgag cagcatcgag tccgccaccc gccgcgcccc
      721 ggtcgccgtc accgccaggc cgagcccggg aaagacgtac gcgttgttgg tctgcgaggg
      781 ggcgaagcgg cgcccgtcga cttccaccgg ggtgcaaggg ctgccgctgg agaagatcgc
      841 ccgcccgccg gtgtggcgat acgcctcctc cgcggtgcac tccgcccgcg aagtcgggtt
      901 cgacagcgcg aacaccaggg ggcgctcgtt gacctccgcc atggcctgga gcacttcggc
      961 ggtgaagagc cggggctgcc cggtcacgcc gatcagcgcc gtgggccgga gcccgcggat
     1021 cgcgtccgcg agtcccgcca ccggcacgtg cgcgtgggcg tagcggcgtc gcccctcggg
     1081 cagaccggtg cggtccttca ccaccagccc ggacgcgtcg aacatccaca cccggcgtgc
     1141 ggcctcggcc tcgtccagcc cggcgcggcg aagcgcggtg accgtcaggt ccgagattcc
     1201 gatcgcggcc gcgcccgcgc cgaggaagag gaggcgctcg tcggccagcc cccggccggt
     1261 cacccgtccg gacaccttca gcgccgcgag cgtcaccgcc gccgtgccct ggatgtcgtc
     1321 attgaaggca caggcctggt cccgatagcg cgccaggagg ccgagcgcgt tgtcggtcgc
     1381 gaagtcctcg aactggacca gcaccccggg gaagacgcgt cccaccgcgg tcatgaactc
     1441 gtccaccagg ctcgcgtact ccgcaccgcg gaggcgcggc tcgcggagcc cggtgtagag
     1501 cgggtcgccg agcaggccgg cgttgttcgt gccgacgtcg agcatgaccg gcaggcagag
     1561 cgagggccgg atcccgccgc aggcggtgta gagcgccagc ttgccgatgg ggatgcccat
     1621 cccgtagctg cccaggtcgc ccaggccgag aatgcgctcg ccgtccgtca ccacgatgac
     1681 gccgacctcg cgctcgggcc agttgcggag cacctccgcc acccggccgc ggtgccgcgc
     1741 cgacaggtag aggccgcgcg gccggcggaa gatgtgcccg aaccgggcgc aggcctcgcc
     1801 gacggtgggg gtgtagatga tcggcatcat ctcggggaga tgatccacca ccgtgcgata
     1861 gaagagggtc tcgttccggt cctggagcgc caccatgtag acgtatcgct ccaggtcgga
     1921 cgccttggcg cggaagttct ccatcacccg gccgagctgc tcctcgatgg tgaacacccg
     1981 cggcgggagc agcccctcga gtccgagcgc ggcgcgctcc tccggggtga aggcggtgcc
     2041 cttgttgagc cgcgggtcct gcagcaggtc caggccccgc ttgcttggcg tccgaggccg
     2101 cactagtcga tccccaccct cccctggatc gaggcgagca gcttcgccgg gtcgtacccg
     2161 acgccgtcct tgaacacgat cgtcgggctc cgtatcgccg acggatcccc ggcgagatcg
     2221 cctttcagca ccaccaggtc cgccagcttc ccccgctcca ccgtgccgag ctgccgctcc
     2281 acacccagga tcctggcgcc gttggcggtc atgatctgca ccgcctgggc cggggtgaag
     2341 cccgcctcga tcagcagctc gtagttccgc tggtcgccgt accccgcgag cgccccgccg
     2401 atcccggtcg gatccacccc cgcgcccagc agcccgccgg ccgcgacgaa ggcgcgctcg
     2461 aaggccatgg ctctcttgag accctcttcc gctaccgggc cgctccccga ggagtcgatc
     2521 tggtgccgga tctggaggta cgtctcccgc agcgccggcg tcatggcctc cagcgtgcgc
     2581 gcgtcgctgg tcggacggtt ggcgacgaag ggctcgtaga ccgccagcgt cgaggtcatg
     2641 gacaccttgt gcttcaccat cgtggcgatc acgtcccggg cggtctcccc cgacggatcc
     2701 gacctcccca gctccccgac ctgctccacc gggcagacat ccggctgctt gccggggtcg
     2761 aaatcggagg cggtgagcat gccgtgctcc agattgtcga tccccagcgc caccgcctcc
     2821 cggaagctga ccgagcagag gtgcccggtg accttcacct tccgcttgtg ggcctccttg
     2881 atcgtggcgg ccagctccgc ccggcggatg tcggtgtagg ccttgatcca ggtggccccc
     2941 tctgccgccc agtaggccac gaatctgcgt gcggcctcgg gagagctcac caccgccatg
     3001 ctgcctccgc cctcggtgcc ggtgatgtag ggcgcggtga gatggatacg gggacccgga
     3061 gtcagtccgc cgtcgatgct ctgcctgacg ttgatctcgg cgtaagggga gcggccgccg
     3121 gtagtccgga tcgtggtgac gcccgagccc aggtagagcc gcgggccggt gtacgacatc
     3181 tgcaccgcgc ggccgccggc cgcggtgtag aacatgtggt cgtgcatgcc cacgataccg
     3241 gggatgagcg tgtggccggc caggtccatg gtgtgggcac cggcgggagg ccgcaccgag
     3301 ccggacggcc cgaccgccgc gatcttcccg tcgcggatga tcaccgtgtg tccgggacgc
     3361 ggcgcgccgc cggtgccgtc gatcaggagc acgttgctga gcacgacggt gttggtgtcc
     3421 agggccacgt accggcgcac ctcctcggag agggagtcgg gccgctgggc ggcgagcgtg
     3481 ccggcggaga cggagaggag gacggtcggc aggacggaac ggaagtgcat ggtgctctct
     3541 ggtaaatggg ggtgaccggc tactccacgt cgaatcgggt catcatgtcg gcggacaggt
     3601 gctcggcgat gtggcagtgc agcatccagc ggccggggtt ggaggggtcg agcagaatat
     3661 ccaccgcggc gcccgccggc agcaacacgg tgtccttcca caccggatgc tcgtccggca
     3721 ccccattcac cgacagcacc agaaagcgct ggccgtgcag gtggatcgga tgctgcatgg
     3781 cgtggaagct ccggcgctcg ttcaccagcc ggatccgcac cggctcgccg cgccggaacc
     3841 gccaggccac ctccatgttc tcgcggccgg tggcagggtc ccggaggatc cagcggacct
     3901 gccggccggt cgaggcccag ttcatcatcg gcatcgtgcc gctccactcc atcggggaga
     3961 agtagatgga gtcgagctgc atgaggcgcc gggtgacggc cgggaggtcg cgggtctcca
     4021 gggtcaggat gagggcttct tcccgggcct cgtccgcgcc acgacggaac cgctccagct
     4081 cggcggcggc cgcggggtcg gtgcgaaggg catcgaaggc acgggccgga gcggcgtcgg
     4141 gacgctcgcc gccgacgttc acgaccccga gcgtgtccgc ctcggcgaag aacttgccgt
     4201 agagatggtc gagccc
//
LOCUS       DASUYN010000666         5143 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1092297, whole genome shotgun sequence.
ACCESSION   DASUYN010000666 DASUYN010000000
VERSION     DASUYN010000666.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5143)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5143)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5143
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1092297"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(27..851)
                     /locus_tag="VF061_12995"
     CDS             complement(27..851)
                     /locus_tag="VF061_12995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670475.1"
                     /translation="METRTDRPGIVFGTFEMRNNHLNSVHTGWMNGGPLEPSNIVSWL
                     SGARSKGGRVVIKLCKGKDSYVKNGDGTFSLSKWKSLVSRYRNVNLDPYIKDGTIVGH
                     YLIDEPHRASRWGGRPISQKTLEEMAQYSKQLWPGMSTLVRVVPSWLTSASVSYRHLD
                     AGWAQYTSAKGDAAKWAAAEAAAAKKKGLGLVVGMNVINGGNGSSGIRGSRKGQWSMS
                     ASEVKKYGAAMLSEAHACAFFNWQHDTDYYDRSDMRSAMAEVSKKAKAHVRTSCRQ"
     gene            1478..1975
                     /locus_tag="VF061_13000"
     CDS             1478..1975
                     /locus_tag="VF061_13000"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX6670476.1"
                     /translation="MPDSSAPGIAPLRTGPLVLVVDDDQPDRISATRMVRGLGYPARS
                     FRQGRDALQFVDRYPQVARVLIADLGMPLMDGGELVERVLDADPTMRAALMADRRDPA
                     TAELLEGYRDLPILYKPIGFADLYGVLTGLAGPPPHAVESPPASIAAASPWSRRRTSG
                     QFPER"
     gene            complement(2001..2675)
                     /locus_tag="VF061_13005"
     CDS             complement(2001..2675)
                     /locus_tag="VF061_13005"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEX6670477.1"
                     /translation="MTESRDRRRIQVLVFAASLRRASLNQRLAQLAAAVVEEQGGTAD
                     LAAMRDFDCPSYDGDVERESGAPPAAQRLRERLVATDAFIIASPEYNASMPGCLKNAI
                     DWASRIRPQPFNGRQGMLISASPSMAGGNRGLWSLRVPLEHLGARLYPDMFALAQAHE
                     AFDPAGRIATPVLQERFERTVGCFLELVEAAKHYRPLKKLWVEYLGEHPDAAIDRVEH
                     TPMEAE"
     gene            complement(2713..3969)
                     /locus_tag="VF061_13010"
     CDS             complement(2713..3969)
                     /locus_tag="VF061_13010"
                     /inference="COORDINATES: protein motif:HMM:NF018448.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HEX6670478.1"
                     /translation="MSDPLDARLERRRDEPDPSAVGFVLELGRALHAAGHSAQRLEDS
                     LGAISDRLGLPNHQFFSTPTSIMASFGPIGRQRTHMLRVAPGEVNLGTLAALEQVSLD
                     VAQGRMSPAEGTAAITRITSAPAPYGPGLTTLGYGVVSGAATQFLGGGGREVAVAAVL
                     GLGVGILALVTRGRPRLGRLFEPVAAVLVSAGALGLAGLAGPLSVLIATLGGLIVLLP
                     GLTLTVAMSELATRNLASGTARISGAFMTFLAIAFGVALGNRIGAAAFGAVPATASPA
                     LPDWTAVVAVVAAGLGFVVVLRAQPRDGLWIVAIGALGVIGGRVGAATLGIELGTFAG
                     ALAVGLASNAYARLTQRPAAVVSVPGILLLVPGSVGFRGLTSLMERQAVAGIETIFSM
                     VLTAVALVAGLLVAAVVAPEPRLSRR"
     gene            4121..4597
                     /locus_tag="VF061_13015"
     CDS             4121..4597
                     /locus_tag="VF061_13015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670479.1"
                     /translation="MAGTLLSTLREWGPYALPFILLLVLMRLRRKSAGRLEQLYPAVP
                     PAPGTRMRRVRVVFGRGPSLTWVKLGVDHAWLHVSLFGTLRRQAAFSVPLDDVTAAAD
                     RFAPMILFPDVIRLSFARDPGWPMLVWPHVFAELAAASQGRLRVAEEGLVPIGSRR"
     gene            complement(4578..>5143)
                     /locus_tag="VF061_13020"
     CDS             complement(4578..>5143)
                     /locus_tag="VF061_13020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670480.1"
                     /translation="AEAPAGRPRQMPGPEPVPSTRRRGGFHGNLGLGAGVADLACDGC
                     DDPSRTGFSGYLSLGGRVGDRSVVGVEGTGWASSETGTSSAVWSLTATVTRYLSANSG
                     LFLGAGLGLVGYREDTEGTGADVSAKSVGFSGRLGYDIGTGRFVVVPYVGFVRTFAGA
                     DFKSDGEDIGFNAAVGNLQFGLSAGIR"
BASE COUNT          748 a         1797 c         1860 g          738 t
ORIGIN      
        1 ggaccgatcg ggggcgggac ccgcgcctac tggcggcagg aggtcctgac gtgggccttg
       61 gccttcttgg agacctcggc catcgcgctc cgcatgtcgg agcggtcgta gtagtcggtg
      121 tcgtgctgcc agttgaagaa cgcgcaggca tgggcctcgc tcagcatcgc cgcgccgtac
      181 ttcttgacct cgctggcgct catcgaccac tggcccttgc gggatccccg gatgccgctg
      241 gacccgttgc cgccgttgat cacgttcatc cccaccacca ggccgaggcc cttcttcttc
      301 gccgccgcgg cttcggcggc ggcccacttc gccgcgtcac ccttggccga cgtgtactgg
      361 gcccagccgg cgtcgagatg ccggtagctg accgacgcac tggtgagcca gctggggacc
      421 acccgcacca gcgtggacat cccgggccac agctgtttgc tgtactgggc catctcctcc
      481 agcgtcttct gcgagatcgg ccggccgccc cagcgggagg cgcggtgcgg ctcgtcgatc
      541 aggtagtggc cgacgatggt gccgtccttg atgtagggat ccaggttgac gttgcggtag
      601 cggctcacca gcgacttcca cttggagagg ctgaaggtgc cgtccccgtt cttcacgtac
      661 gagtccttgc ccttgcacag cttgatcacc acccggccgc ccttggaccg tgcgccggag
      721 agccaggaca cgatgttgga cggttcgagg ggaccaccgt tcatccagcc ggtgtgcacg
      781 ctgttcaggt ggttgttccg catttcgaag gtgccgaaca cgatgccggg gcgatcggtc
      841 cgcgtctcca tcacggcgtc ggcgaggggg ccggcgggag ctggttcggc tccaggggcg
      901 gacgggagcg agtcctcttc gccgcaggcg gcggagagaa cggcaagggc ggcgatccag
      961 ggtcgaacgc acagggtaag gcgagacaat gacgagcagg gcatacgccg ggcttcccct
     1021 ctgagcggag aggtgagtac gcggtcttcc gcgtcatgcg tcgctgcgac tgcagggtgt
     1081 gcggcgcgtg cgagcgggcg gaccgtgcgg ggacggtatc gggacctcgc ggcagcagag
     1141 gtcgggatgt tgtttggaga gatgtccgtg ccgtcgaggg ccacggtcgc gatggaatgg
     1201 cggcccggat ggcgccatct catgttcagg tgctcgcggg tggacaatat ccggcaggag
     1261 cccgaatcct gtcaaccgtc agaatcgcga cacaagaaca cctatgggcc ctcggtgccg
     1321 ctgcgggccc tcggtaccgg tgcgccatct cacagccccg ggaggcgtgc gagggttacc
     1381 tagcggtatc gccgcgctcg gggcgccggc gttaagttcc cagacaccct accctcgtcg
     1441 tggcgagggc ttaccggcgt tcacacccgg aggccccgtg cccgacagct ccgctcccgg
     1501 catcgccccg cttcgcaccg gccctctggt cctggtggtg gatgatgacc agcccgatcg
     1561 gatctccgcc acccgcatgg tcaggggact cggctacccc gcccgcagct tccgccaggg
     1621 ccgggatgcg ctgcagttcg tggaccgcta cccccaggtg gcccgggtgc tgatcgccga
     1681 cctcggcatg ccgctgatgg atggcggaga gctggtggag cgggtgctgg acgccgaccc
     1741 gaccatgcgc gccgcgctga tggcggaccg gcgcgatccg gcgaccgcgg agctgctgga
     1801 ggggtaccgc gacctgccga ttctctacaa gccgatcggg ttcgccgacc tctacggcgt
     1861 cctcacgggc ctggcgggcc cgccgccgca cgcggtcgag tcaccgccgg cgtcgatcgc
     1921 tgcggcgagc ccgtggagcc ggcggcggac gtcgggacaa ttcccggagc gctgacgtcg
     1981 aaggcggcgt gtcctgccgg ctattccgct tccatcggcg tgtgctccac ccggtcgatc
     2041 gccgcgtcgg gatgctcgcc caggtactcc acccagagct tcttcagcgg ccggtaatgc
     2101 ttggccgcct ccaccagctc caggaagcat cctacggtcc gctcgaaacg ctcctggagc
     2161 accggagtgg cgatgcggcc ggctgggtcg aacgcctcat gcgcctgggc cagcgcgaac
     2221 atgtccggat acagccgagc gccgaggtgc tccagcggca cccgcagcga ccagagcccg
     2281 cgattcccgc cggccatcga aggcgaggcc gagatcagca tcccctggcg gccgttgaac
     2341 ggctgggggc ggatgcgcga ggcccagtcg atcgcgttct tcaggcaccc cggcatggac
     2401 gcgttgtact cgggggacgc gatgatgaaa gcgtcggtgg cgacgagccg ctcccgcagc
     2461 cgctgggccg ccggcggcgc accgctctcc cgctcgacgt cgccgtcgta ggaggggcag
     2521 tcgaagtcgc gcatcgccgc gaggtctgca gttccgccct gctcctccac caccgccgcc
     2581 gccagctggg cgagccgctg attcagcgag gcgcggcgca gggacgccgc gaagacgagc
     2641 acctggatgc gccggcgatc tcgtgactcg gtcatgaggt acctcggact gtgaaggttg
     2701 cggcgccgag gctcagcgcc gcgagagtcg gggctcgggg gccacgacgg cggcgaccag
     2761 cagcccggcg accagcgcta ccgcggtgag gaccatgctg aagatggtct cgatccccgc
     2821 caccgcctgc cgctccatca acgaggtcag cccccggaat ccgacgctgc ccggcacgag
     2881 gaggagaatc ccgggcaccg acaccaccgc ggcgggccgc tgcgtcagcc gcgcgtaggc
     2941 gttgctcgcg agcccgaccg cgagcgcgcc cgcgaaggtc ccgagctcga tgccgagggt
     3001 ggcggcgccg acgcgcccgc cgatcacacc gagggcgccg atcgccacga tccagagccc
     3061 atcccgcggc tgggcccgga gcaccacgac gaatccgagg ccggccgcca ccaccgcgac
     3121 gacggcggtc cagtcgggca gggccggcga cgccgttgcc ggtaccgcgc cgaaggccgc
     3181 cgcgccgatc cggttgccca gggccacgcc gaacgcgatg gccaggaagg tcatgaaggc
     3241 gccactgatg cgggccgtac cggacgcgag attccgggtg gccagctcgg acatcgccac
     3301 cgtgagggtg agtcccggca ggagcacgat gaggccgccc agggtcgcga tgaggacgct
     3361 gagcggaccg gctagccccg caagcccgag cgcgccggcg ctcaccagga ccgcggccac
     3421 cggctcgaac agccggccga gcctcgggcg cccccgggtg acgagcgcga ggatgcccac
     3481 ccccagcccc agcaccgccg ccaccgccac ctcgcgaccg ccgccgccca ggaactgggt
     3541 ggccgcgccc gacacgacgc cgtagccgag cgtcgtcagg ccggggccgt agggcgccgg
     3601 tgcagacgtg atccgggtga tggcggcggt gccttcggcc ggcgacatgc gtccctgggc
     3661 gacgtcgagc gacacctgct ccagcgccgc gagcgtgccg aggttcacct cgccgggtgc
     3721 cacccggagc atgtgggtgc gctgtcggcc gatcgggccg aacgaggcca tgatggacgt
     3781 aggggtggaa aagaactggt gattgggcag tcccaggcgg tcggagatcg cgccgaggct
     3841 gtcctcgagg cgctgggcgg agtggccagc ggcgtggagg gcgcggccga gctcgaggac
     3901 gaagccgacg gcggagggat cgggctcgtc ccggcggcgc tcgaggcggg catcgagggg
     3961 atcggacacg gcggctccgg ctgggggcgc cgaaaggtgg cacggacgcg ccctgaggag
     4021 aacagcgccc gggcccctgc gacgggatcc gggcccattt cgggcgttac cctgcagtac
     4081 accgcactgg ccgttcaacc ctcgaccagg gagaccgggg atggcgggca cgctcctgag
     4141 cacgctgagg gaatgggggc cgtacgcgct gcccttcatc ctgctgctgg tgttgatgag
     4201 gctgcggcgg aagagcgcgg ggcgcctgga gcagctctac ccggcggtgc cgccggcgcc
     4261 gggcacccgc atgcgccggg tgcgagtggt cttcgggaga gggcccagcc tcacctgggt
     4321 gaagctgggg gtggaccatg cctggctgca cgtttcgctc ttcggcaccc ttcgccggca
     4381 ggcggcgttc agcgttccgc tcgacgacgt caccgccgcg gcggaccggt ttgcgcccat
     4441 gatcctgttc cccgacgtga tccggctcag cttcgcgcgg gatcccggct ggccgatgct
     4501 ggtgtggccg cacgtgttcg ccgagctggc ggcggcgagt caggggcggc tccgggtcgc
     4561 ggaggagggc ctcgtgccta tcggatcccg gcgctgagac cgaactgcag gttgccgacg
     4621 gcggcgttga agccgatgtc ctccccgtcg gacttgaagt ccgcacccgc gaacgtgcgc
     4681 acgaatccga catacggcac gaccacgaag cgtccggttc cgatatcgta gccgagccgc
     4741 ccggaaaacc cgaccgattt cgcgctcaca tcggcgccgg tgccctcggt gtcttcgcga
     4801 tacccgacga ggccgagtcc cgctcccagg aacaggccgc tgttggcgct caggtacctg
     4861 gtcacggtgg ccgttaggct ccagacggcg gagctcgtgc ccgtttcgct gctggcccag
     4921 cccgtgccct ccactcccac cacggacctg tcaccgaccc ggccgcccag cgagaggtag
     4981 cccgagaagc cggtccggct ggggtcatca cacccgtcac aggcgagatc ggccacgccg
     5041 gcgccgagtc ccaggttccc gtggaagccg ccgcgccggc gggtcgaggg aaccggctcg
     5101 ggtccgggca tctgtcgcgg ccgtcccgcg ggcgcctcgg cga
//
LOCUS       DASUYN010000667         2109 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_432559, whole genome shotgun sequence.
ACCESSION   DASUYN010000667 DASUYN010000000
VERSION     DASUYN010000667.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2109)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2109)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2109
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_432559"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..415
                     /locus_tag="VF061_13025"
     CDS             <1..415
                     /locus_tag="VF061_13025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670481.1"
                     /translation="GGPDLLPGYDFRAFTCAPRGFDDPSDLALCDRVISAQLEVRTRV
                     GLNLGFRTGDRESGARRFIGIEEADLVLLADAGKGWLAGSGPGQVPVNRIPSFEEWKV
                     DVGIGLDAGEIGAYIAKGISEGESVKFLVRLQRRF"
     gene            415..1059
                     /locus_tag="VF061_13030"
     CDS             415..1059
                     /locus_tag="VF061_13030"
                     /inference="COORDINATES: protein motif:HMM:NF025692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4390 domain-containing protein"
                     /protein_id="HEX6670482.1"
                     /translation="MVVLLLLALLAVAIPGETHAQAGNSVRLEVRLTPDTARSGARAP
                     VVRAENLLGDGRWLSTLRSGLPVRLHYRIEVWRSRDGWLDQLTRQVYWDVVLRHEPLL
                     DQYTMLTIFGTRVQERRYATLDALTAALAFAYQINVSPAERGNYYYSATLEVSTLSDA
                     DLDELERFLEGDLGEARGEGLGDALGREATRFLLRLAGLPSLRLEARTGRFRIR"
     gene            complement(1080..1592)
                     /locus_tag="VF061_13035"
     CDS             complement(1080..1592)
                     /locus_tag="VF061_13035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEX6670483.1"
                     /translation="MVPVRRALRLVIEGKAEIVESDSGDVVRSERLTLPKPAIIRLMK
                     FVHVPRRFRRQVTNTFLFARDGYRCQYCHRGNGALRHRECLTRDHLIPLSRGGDNEWT
                     NVVTACSTCNTRKGNHLPEECGMHPLAVPREPHFVHLSWAVRRLSWQQAKYIKLFYGE
                     EALKALGGTV"
     gene            complement(1790..>2109)
                     /locus_tag="VF061_13040"
     CDS             complement(1790..>2109)
                     /locus_tag="VF061_13040"
                     /inference="COORDINATES: protein motif:HMM:NF014864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670484.1"
                     /translation="IRELGLAKLSDRQGGAYYAHPHRAALRPDLAQVLPTLLVSVDGV
                     GPLLVLKTASGSAGAVTEALDQAGWGEVMGTIAGDDTVLVITRSPKLREAIASRIQSL
                     VRK"
BASE COUNT          311 a          722 c          743 g          333 t
ORIGIN      
        1 cggcggcccc gacctgctcc cggggtacga cttccgcgcc ttcacctgcg cgccgcgcgg
       61 gttcgacgac ccctcggatc tggcgctgtg cgaccgggtg atcagcgcgc agctggaggt
      121 ccgcacccgt gtcgggctca acctcggctt ccggaccggc gaccgcgaga gcggcgcgcg
      181 ccgcttcatc gggatcgagg aggcggatct cgtcctgctc gcggacgccg gcaagggctg
      241 gctggccggt agcgggccgg gccaggtgcc ggtgaaccgc atcccctcgt tcgaggagtg
      301 gaaagtggac gtcgggatcg gcctggacgc gggggagatc ggcgcctaca tcgccaaggg
      361 gatttccgag ggcgagtcgg tcaagttcct ggtccggctc cagcgccgtt tctagtggtc
      421 gttctccttc ttctggcgct gctcgccgtc gcgatacccg gtgaaacgca cgcgcaggcg
      481 ggcaactccg tccgcctgga ggtgcggctg acgcccgata cggcgcgctc cggcgcgcgt
      541 gccccggtgg tccgggcgga gaacctgctc ggcgacgggc gctggctctc cacgctccgc
      601 tcgggcctcc cggtccggct gcactaccgg atcgaggtct ggcgctcgcg ggacggctgg
      661 ctcgaccagc tcacccggca ggtgtactgg gacgtggtgc tccggcacga gccgctgctc
      721 gaccagtata ccatgctcac catcttcggc acccgggtgc aggagcgtcg ctacgccacc
      781 ctcgacgcgc tcaccgccgc gctcgccttc gcctaccaga tcaacgtgag tccggcggag
      841 cggggcaact attactacag cgcgacgctg gaggtctcca ccctctcgga cgccgacctg
      901 gacgagctgg agcgattcct ggagggtgat ctcggcgagg cccgcggcga ggggttgggc
      961 gatgcgctgg gccgggaagc gacgagattc ctgcttcgtc tggcgggact gccgagtctg
     1021 cggctggaag cgaggaccgg caggttcaga atcaggtaga gtgacgtgac gtcacgtcac
     1081 tagacggttc cccccagtgc cttcagcgcc tcctcgccgt agaacagctt gatgtacttg
     1141 gcctgctgcc aggaaagccg gcgtacggcc cacgacagat gcacgaagtg cggctcgcgc
     1201 ggcacggcga gcggatgcat tccgcactct tccggcaggt ggttgccctt ccgggtattg
     1261 caggtgctgc acgccgtcac gacgttggtc cactcgttgt ccccgccccg ggacagcgga
     1321 atcaggtggt cccgggtcag gcactcgcgg tggcgcagcg cgccattgcc ccggtgacag
     1381 tactggcacc ggtaaccatc gcgagcgaag aggaaggtgt tggtgacctg gcggcggaag
     1441 cggcggggga cgtgcacgaa cttcatcagg cggatgatcg ccggtttggg caaggtgagc
     1501 cgctcgcttc ggacgacgtc accgctgtcc gactcgacga tctcggcctt gccctcgatc
     1561 accaggcgca gcgcgcgccg gacggggacc atggtcaacg gctcgaatga ggcgttcaac
     1621 gccaggcacc gcacgctacc ttctccgctg ccagtatcgg ggaacggacg gaacggctcg
     1681 gcgcgaatgg ccgcagggcc gagcgcgcac gctatcaaat cgtaacgacc ttccgggggc
     1741 ggcggcaagg gaagtccctg ccgtgccggc tccgccccag ccgcgcaagc tatttcctga
     1801 ccagcgattg gatcctggag gcgatggcct cccggagctt ggggctccgg gtgatgacga
     1861 gcacggtgtc gtccccggcg atcgtcccca tgacctcccc ccagccggcc tggtccagcg
     1921 cctcggtaac cgccccggcg gagccgctcg cggtcttgag caccaggagc gggcccacgc
     1981 cgtccacgct caccagcagg gtcggcagca cctgggcgag atccggacgc agcgcggccc
     2041 gatgggggtg cgcgtagtag gccccgccct ggcggtccga cagcttcgcc agcccgagct
     2101 cacggatgt
//
LOCUS       DASUYN010000668         2670 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1753889, whole genome shotgun sequence.
ACCESSION   DASUYN010000668 DASUYN010000000
VERSION     DASUYN010000668.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2670
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1753889"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..739)
                     /locus_tag="VF061_13045"
     CDS             complement(<1..739)
                     /locus_tag="VF061_13045"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEX6670485.1"
                     /translation="MSHESFAATLALIGLVILVSSLLSGAAERTGLPLVAIFLLLGAA
                     LGPAGLGLVELSLESEALQVIATLGLVLVLFIDAIGVDIGELKEQRRLALYILGPGTL
                     IPAVLMAAAAWALLDLPVPAAAILGAALASTDPVLLRTLIRNPALPGRARLALRLESG
                     MNDVILLPIVVLSMLLLREGGTGATEVGERVVGLFLLGPLLGVVAGYVAITLLDQVRK
                     RVGVRRDYESLYALGVAFTAYAAAEAVG"
     gene            797..2284
                     /locus_tag="VF061_13050"
     CDS             797..2284
                     /locus_tag="VF061_13050"
                     /inference="COORDINATES: protein motif:HMM:NF003715.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium/proton antiporter"
                     /protein_id="HEX6670486.1"
                     /translation="MPFSSAEPFATALLLTTCGVLLAVSVVFSRASERIGVPIALIFL
                     GVGMLAGSEGVGGIPLDDYQFAFRMGSLALALILFDGGLNTPLDALRRSWAPAGILAT
                     AGVVLTAALVAFPAYLWGVAWPEALLLGAVVSSTDAAAVFAVLRGSGLQLKRRVGVTL
                     ELESGLNDPVAVILTIALTTNLLDPGAVEPWEVGLEVVRELVVGALIGAAVGYGGRHL
                     LGRLQLPSGGLYPAMTLGLALLGYGVATLAHGSGFLAVYLAGLILGNGPLPYRSGLLR
                     VHDALAWLAQIGMFLILGLLVFPSRLPEVAALGLAVAILMAVVIRPAVVALCLAPFRY
                     PWKERLYIGWVGLRGAVPIVLATYPVLLGAPGADRIFHLVFFIVVVNALVPGTTVAWV
                     TRRLGLQATTSPAPQAVLAIESRLPLRGEMMSFYIDEALVVAGITLEDLDFPEGASVA
                     LIVRGNQLIPPRGSTVLQPGDHVYVIAQPEDRPLIYLMFGRQEED"
     gene            2391..2636
                     /locus_tag="VF061_13055"
     CDS             2391..2636
                     /locus_tag="VF061_13055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670487.1"
                     /translation="MDHPPREVRLRPEFAEIYPGLRPGEWVAAAAWAEAIVERAREAR
                     LLSIHRRTFDPDHFDFRGGAPPRDAASRHLRTRAEDR"
BASE COUNT          342 a          982 c          945 g          401 t
ORIGIN      
        1 cgcccaccgc ctcggcggcg gcgtaggcgg tgaatgccac cccgagcgcg tagagcgact
       61 cgtagtcgcg ccgcaccccg acccgcttcc gcacctggtc cagcagggtg atggcgacgt
      121 accccgccac cacgccgagc agcgggccca gcaggaagag gcccaccacc cgctcgccca
      181 cctccgtggc cccggtcccg ccctcccgca ggaggagcat gctgagcacc acgatgggga
      241 ggaggatgac gtcgttcatc ccgctctcca gccggagcgc gagccgcgcc cggccgggca
      301 atgccgggtt ccggatcagc gtgcggagca gcaccggatc ggtgctcgcg agcgcggcgc
      361 cgaggatcgc ggcggccgga accggcaggt ccagcagcgc ccaggccgcg gcggccatga
      421 gcaccgcggg aatgagcgtt ccggggccga ggatgtagag cgcgaggcgc cgctgctcct
      481 tgagctcgcc gatgtccacc ccgatggcgt cgatgaagag caccagcacg agccccagcg
      541 tggcgatgac ctgcagcgcc tccgactcga gcgagagctc caccaggccg agccccgccg
      601 gccccagggc cgcgccgagg aggaggaaga tcgccaccag cgggagcccc gtgcgctccg
      661 ccgcgccgga gaggagcgag gagacgagga tgacgagccc gatcagggcg agcgtggccg
      721 cgaaggattc gtgggacatg ggtgctgagt atcgccgcct ctggcggggt tcgccagccg
      781 ggtgctaacc tctacggtgc ctttctcctc cgccgagccc ttcgccaccg cgctcctgct
      841 cacgacctgt ggcgtgctcc tcgccgtcag cgtggtgttc agccgcgcct ccgagcggat
      901 cggcgtcccc atcgccctca tcttcctcgg cgtgggcatg ctggcgggaa gcgagggcgt
      961 cggcgggatc ccgctcgacg actaccagtt cgccttccgg atgggctcgc tcgcgctggc
     1021 gctcatcctg ttcgacggcg ggctcaacac cccgctcgac gcgctgcgcc ggtcgtgggc
     1081 gccggccggg atcctcgcca ccgccggcgt ggtgctgacg gcggcgctgg tggccttccc
     1141 cgcctacctc tggggcgtcg cctggcccga ggcgctgctg ctcggcgccg tggtgtcgtc
     1201 caccgacgcg gcggcggtgt tcgccgtgct ccgcggcagc ggcctccagc tcaagcgccg
     1261 cgtgggggtc acgctggagc tcgagtcggg gctcaacgac cctgtcgccg tcatcctcac
     1321 gatcgccctc accaccaacc tgctcgaccc gggcgcggtg gagccatggg aggtcgggct
     1381 cgaggtggtg cgcgagctgg tggtgggggc gctgatcggc gccgcagtgg ggtacggcgg
     1441 ccgccacctg ctcgggcggc tgcagcttcc cagcggcggg ctctatccgg ccatgaccct
     1501 gggtctcgcg ctcctgggtt atggtgtggc aacgctggcg cacggcagcg ggttcctggc
     1561 ggtgtatctc gcgggcctga tcctcggcaa cgggcccctt ccctaccgca gcgggctgct
     1621 gcgggtgcac gacgcgctcg cctggctggc ccagatcggc atgttcctga tcctcgggct
     1681 cctcgtgttc ccctcccgcc tccccgaggt ggccgccctg ggcctggccg tggccatcct
     1741 gatggccgtg gtgatccggc cggcggtggt ggcgctctgc ctggcgccgt tccgttaccc
     1801 ctggaaggag cggctctaca tcggctgggt ggggcttcga ggcgcagtcc cgatcgtcct
     1861 cgccacctat cctgtgctgc tcggggcacc cggcgccgac cggatctttc acctcgtgtt
     1921 cttcatcgtg gtggtgaacg ccctggtgcc cggcaccacg gtggcatggg tgacccgccg
     1981 gctcggtctc caggccacca cctcaccggc gccgcaggcg gtgctcgcga tcgaatcgcg
     2041 gttgccgctc cggggcgaga tgatgtcgtt ctacatcgac gaggcgctgg tggtggcggg
     2101 gattacgctc gaggacctgg actttcccga gggggcatcg gtggcgctca tcgtccgggg
     2161 caaccagctg atcccgccgc gggggagcac cgtgctgcag ccgggggacc acgtctacgt
     2221 catcgcccag ccggaggacc ggcccctcat ctacctgatg ttcggacggc aggaagagga
     2281 ttgagggcgg gtcccgattc cgcgtgagcc cacacacaga gccgccgccc tcgacgctct
     2341 aaccttcacc ctcacccggg agccccgtac cttgcgacga aggagactgc atggaccacc
     2401 cgccccgcga ggtacgcctg cgccccgagt tcgccgagat ctaccccggg ctgcgtccgg
     2461 gcgagtgggt ggcggccgca gcctgggccg aagcgatcgt ggagcgggcg cgggaggcac
     2521 gcctcctcag catccaccgg cgcaccttcg atcccgatca tttcgacttt cgcggcggcg
     2581 ctccgccgcg ggacgcagcc agccggcatc tccgcacccg ggcggaagac cggtgaccac
     2641 cgcccgccgg gccaccccgc tccggtagcg
//
LOCUS       DASUYN010000669         2071 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_433896, whole genome shotgun sequence.
ACCESSION   DASUYN010000669 DASUYN010000000
VERSION     DASUYN010000669.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2071
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_433896"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..962)
                     /locus_tag="VF061_13060"
     CDS             complement(<1..962)
                     /locus_tag="VF061_13060"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX6670488.1"
                     /translation="MLRRFLPVLLVAAGLPACQPEAGRRGATVLFASGADLQSINPLL
                     TQHPLARQVQRYVLLTTLARYDSALVPEPYLARAWRWSGDRATLTFQLHGGVRWHDGV
                     PTTSRDVIWTLTAARDPATGYPRLADLEGIAAVSTPDDSTVVVRFDRPQVRFPDVLTD
                     LAILPAHLLDTVPASRLRQAEWNIRPIGNGPFRFVAHEPNRRWVFAANRDFPGALGGP
                     PRLERLIVVVVDEPTTKLAALTSGELDFAGIQPAHASFVRRDPALEVRTFPLLLTYGI
                     VLNTRRAPFGDLGTRRAVSAGIDRQEIVDGYLYGFGTPATGPVPP"
     gene            1015..1974
                     /locus_tag="VF061_13065"
     CDS             1015..1974
                     /locus_tag="VF061_13065"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX6670489.1"
                     /translation="MALLMLRRALSGAAVVFGVLTLMFFLLRLAPGDPARLLVGSAAT
                     EDQVETQRRTLGLDRPLPAQYASWLGRFVQGDWGTSIATGRPVARTLAEAWPATVRLV
                     GISLVLSYLLGIAVGVLQAARGGVVDTTLSVVTVTLFALPGYWLALMLVMLFTYETRL
                     LPAFGAAGFDSDFLTGWERLADRLRHLALPLATLTLIGIGGTARYVRGAMLDVAGAPF
                     VAIARAKGLSPARVAVRHVLRNALIPVVTLLGLSLPALFSGAVFIEAIFAWPGVGRVL
                     VEGVVARDYPVVMAATGVSAALVVAGNLLAEILVAWVDPRVRG"
BASE COUNT          249 a          696 c          813 g          313 t
ORIGIN      
        1 ggcggaacgg ggccggtggc cggggtgccg aacccgtaga ggtagccgtc cacgatctcc
       61 tgccggtcga tccccgcgct caccgcgcga cgggtgccga gatcgccgaa gggggctcgc
      121 cgggtgttga gcacgatgcc ataggtcaga aggaggggaa aggtgcgcac ctccagggcg
      181 ggatcgcgcc ggacgaagga ggcatgggcc ggctggatgc cggcgaagtc gagctcgccc
      241 gacgtgagcg cggcgagttt ggtcgtgggc tcgtccacga cgaccacgat gagccgctcg
      301 agtcgcggcg ggccgcccag ggctccggga aagtcgcggt tcgcggcgaa gacccagcgg
      361 cggttcggct cgtgggccac gaaccggaag gggccgttgc cgatcggcct gatgttccac
      421 tcggcctggc ggagccggct ggccggcacc gtgtcgagca ggtgcgccgg cagaatggcg
      481 agatcggtga ggacgtcggg gaagcgcacc tgcggccgat cgaagcggac caccacggtg
      541 gagtcgtccg gggtactcac cgccgcgatg ccctcgagat cggcgagcct cggatagccg
      601 gtggccgggt cgcgcgccgc cgtcagggtc cagatcacgt cgcgcgacgt ggtcggcacg
      661 ccgtcgtgcc agcggacccc gccgtgcagc tggaaggtga gggtggcgcg atccccgctc
      721 cagcgccacg cccgcgccag gtagggctcg gggacgagcg cgctgtcgta gcgggccagc
      781 gtggtgagca gcacgtagcg ctgcacctgc cgggcgagcg ggtgctgggt gagcagcggg
      841 ttgatgctct gcaggtcggc gccggacgcg aagagcacgg tggccccgcg ccggccggcc
      901 tccggctggc aggccggaag ccccgccgcg acgaggagca ccgggaggaa gcggcgaagc
      961 acgccggaaa gtatctccct ggcggctgcg aaggggaggc aggaaattcc ggcgatggct
     1021 ctcctgatgc tgcggcgggc gctcagcggc gcggcggtgg tcttcggcgt gctgacgctc
     1081 atgttcttcc tccttcggct cgcccccggc gaccccgccc ggctcctcgt cggctccgcc
     1141 gcgacggagg accaggtgga gacccagcgc cggacgctcg gactggaccg gccgctgccg
     1201 gcgcagtacg cctcctggct gggacggttc gtgcagggcg actgggggac cagcatcgcc
     1261 accggccggc cggtggcgcg cacgctggcg gaggcctggc ccgcgacggt gcgcctggtt
     1321 gggatctcgc tggtgttgag ctacctgctg ggcatcgccg tcggcgtgct ccaggccgcc
     1381 cgcggcgggg tggtggacac gacgctgtcg gtggtgaccg tgaccctctt cgcgctgccg
     1441 ggctactggc tcgcgctgat gttggtgatg ctcttcacct acgagactcg gctgctcccc
     1501 gcgttcggcg cggccggctt cgattccgac ttcctcaccg gctgggagcg gctggccgac
     1561 cggctccggc atctggcgct cccgctcgcg accctcacgc tcatcggcat cggtggcacc
     1621 gcccgctatg tccgcggcgc gatgctcgac gtggcaggcg cgccgttcgt cgcgatcgcc
     1681 cgggccaagg ggctctcacc tgctcgggtc gcggtgcgtc acgtgctccg caacgcgctc
     1741 attccggtcg tgacgctgct gggcctctcc ctgccggcgc tcttctccgg cgcggtgttc
     1801 atcgaggcga tcttcgcctg gcccggagtg ggccgggtgc tggtcgaggg ggtggtcgca
     1861 cgcgactatc ccgtggtcat ggcggcgacg ggggtgagcg ctgcgctggt ggtggcgggc
     1921 aacctgctgg ccgagatcct ggtggcctgg gtggacccga gggtgagggg gtgagggagc
     1981 tctggcgcga ccgccgcgcc gccttcggcc tatgggtgct gcttggcgcc gcgctggtcg
     2041 cgatcctcgc gcctaccctc gccggtgatc c
//
LOCUS       DASUYN010000670         2423 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1536215, whole genome shotgun sequence.
ACCESSION   DASUYN010000670 DASUYN010000000
VERSION     DASUYN010000670.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2423)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2423)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2423
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1536215"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..972
                     /locus_tag="VF061_13070"
     CDS             <1..972
                     /locus_tag="VF061_13070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670490.1"
                     /translation="VANMTETPVSAAWGGTVYTVETDDVLMNIIPDSQRVRVWVTTPP
                     GTTFFARVFGWGNAIVRAMATAEAAEGAPTVHCLKPFLLPDMWFETGDDEDLDGDGLM
                     DGDLSDQFGGERWFYEPGEGDYYVRYGDDEAGLPYTGYGTGRGGFEEDWGTPMLIKPQ
                     TGNAQRQGNFYFTLDGPESNLRNQIKSGCMDADIGEAPEQEQGGKTGQVGGPAGGITY
                     LVNQDAGASWNEGENTVTGSSYGDEWLNSSPRVILIGLFDPIWLTVAQDENDKLPEGV
                     TYQNFARMWLEDVDGNDNIMARFLGFVPGGEGGPVPSTTVKRIRLIQ"
     gene            995..2239
                     /locus_tag="VF061_13075"
     CDS             995..2239
                     /locus_tag="VF061_13075"
                     /inference="COORDINATES: protein motif:HMM:NF013793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX6670491.1"
                     /translation="MTERSTRTALISSDRGFREMVKDVFLSHEGWTAPALEITAPFES
                     FGEEQVRALRQLHPDLVILDIAEAPDLGVKFAQFLSETTQGIRFIATGPLLQPEHMLA
                     AMRAGVVDYLPKPVTSEAFHAALGRIRHFAGNGGKDAIKQPGQVYAFYSPKGGAGTTT
                     TATNFAVILQRLTGKRTLLVDLDLELGEIALLLGVQPRFNFVDMVKNFHRMDAGLLAS
                     YIEQHSSGIHLLSAPFHPERAEVVSADDIRRILHFLKQHYDYVVVDTPGSFSPTTLAA
                     FDQSDLVFVVTNLDLPSLRNIQRGLPMLKRVLPRGDEQIRMVVNRYSPDSQISLDDVQ
                     RTLGLKVFGTISNDYEALIQSINSGKPIVLNGTSKYTRDVKALGARIAGLSGDFLDEK
                     RAGNWVGRVLGKLRRNPEEAKQ"
     gene            2236..>2423
                     /locus_tag="VF061_13080"
     CDS             2236..>2423
                     /locus_tag="VF061_13080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670492.1"
                     /translation="MSEPIPVPPRTGAPAAGDGPARLPWEQVASGENGASAPVSPLAA
                     ATANNSLFQHVKSRVHRRL"
BASE COUNT          421 a          833 c          815 g          354 t
ORIGIN      
        1 gtcgcgaaca tgaccgagac gccggtgtcg gccgcctggg gtgggacggt gtacaccgtc
       61 gagacggacg acgtgctcat gaacatcata ccggacagcc agcgcgtccg ggtctgggtc
      121 acgacgccgc cgggtaccac cttcttcgct cgcgtcttcg gctggggcaa tgccatcgtt
      181 cgcgccatgg ccaccgcgga agccgccgaa ggcgccccca cggtccactg cctcaagcct
      241 tttctgctgc ccgacatgtg gttcgagacc ggcgacgacg aggacctcga cggcgacgga
      301 ctgatggatg gggacctgag cgaccagttc gggggcgagc gctggttcta cgagcccggc
      361 gagggcgact actacgtgcg ctacggcgac gacgaggccg gccttccgta caccggctac
      421 ggcacgggtc gcggggggtt cgaggaggac tggggtaccc cgatgctgat caagcctcag
      481 accggtaacg cccagcgcca ggggaacttc tacttcacgc tcgacgggcc ggagagcaac
      541 ctccgcaacc agatcaagag cgggtgcatg gacgcggaca tcggcgaagc ccccgagcag
      601 gagcagggtg gcaagaccgg acaggtcggc ggcccggccg gcgggatcac ctacctggtc
      661 aaccaggatg ccggtgcctc gtggaatgag ggcgaaaaca cggtgacggg ctcctcgtac
      721 ggggacgagt ggctcaacag cagcccgcgg gtcatcctga tcgggctctt cgatcccatc
      781 tggctcacgg tggcgcaaga cgagaacgac aagctgccgg agggcgtgac gtaccagaac
      841 ttcgcccgca tgtggctgga ggacgtggac ggcaatgaca acatcatggc ccgattcctg
      901 ggattcgtgc cgggcggcga gggtggcccg gtgcccagca cgaccgtcaa gcgcatccgg
      961 ctgatccagt gagcggccct cccagaaagg tgacatgacc gagcggagca ctcgcaccgc
     1021 cctgatctcg tccgaccggg gcttccgcga gatggtcaag gacgtattcc tctcgcacga
     1081 ggggtggacg gctccggcac tggagatcac cgcccctttt gagtctttcg gggaagagca
     1141 ggtccgggcg ctgcgccagc tgcacccgga cctggtcatt ctggacatcg ccgaggcccc
     1201 cgacctgggc gtcaagttcg cccagttcct gagcgagacg acccagggca tccgcttcat
     1261 cgccaccggc cccctgctgc agccggagca catgctggcc gccatgcggg ccggcgtggt
     1321 ggattacctg cccaagccgg tcaccagcga ggcctttcac gcggccctgg ggcggattcg
     1381 ccactttgcc ggcaacgggg gcaaggacgc gatcaagcag ccgggccagg tctacgcctt
     1441 ctacagcccc aaggggggcg cgggcaccac gaccacggcc accaacttcg cggtgatcct
     1501 ccagcgtctg accggcaagc gcacgctgct ggtggacctc gacctggagc tgggtgagat
     1561 cgcgctcctg ctcggcgtgc agccgcggtt caacttcgtg gacatggtga agaacttcca
     1621 ccggatggac gcgggcctgc tcgcctccta catcgagcag cactcctccg gcatccacct
     1681 gctctcggcg ccgttccacc ccgagcgcgc cgaggtggtg agcgccgacg acatccggcg
     1741 gatcctgcac ttcctgaagc agcactacga ctacgtcgtg gtggacaccc cgggctcgtt
     1801 ctcgcccacc acgctggcgg ccttcgacca gtcggacctg gtgttcgtgg tgaccaacct
     1861 ggacctgccg tcgctgcgga acatccagcg cgggctcccc atgctcaagc gggtgctgcc
     1921 ccggggcgac gagcagatcc gcatggtggt gaaccgctac agccccgaca gccagatctc
     1981 gctggacgac gtgcagcgca ccctcgggct caaggtgttc ggcaccatca gcaacgacta
     2041 cgaggcgctg atccagtcga tcaactcggg caagccgatc gtcctgaacg gcaccagcaa
     2101 gtacacccgc gacgtgaagg cgctcggcgc ccggatcgcg ggactctccg gcgacttcct
     2161 ggacgagaag cgggccggaa actgggtcgg acgcgtgctc ggcaagctcc ggcgcaatcc
     2221 tgaggaggcc aagcaatgag cgagcccatc ccggtcccgc cgcgcaccgg cgctcccgcc
     2281 gccggcgacg gtccggcccg gctgccctgg gagcaggtgg cgtcgggcga gaacggcgcc
     2341 tccgcgccgg tctcgccgct ggcggcggcc accgccaaca actcgctctt ccagcacgtg
     2401 aagagccggg tgcaccggcg gct
//
LOCUS       DASUYN010000671         2037 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1536304, whole genome shotgun sequence.
ACCESSION   DASUYN010000671 DASUYN010000000
VERSION     DASUYN010000671.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2037)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2037)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2037
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1536304"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1455)
                     /locus_tag="VF061_13085"
     CDS             complement(<1..1455)
                     /locus_tag="VF061_13085"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX6670493.1"
                     /translation="MGRSLAALAGREFDVLVVGGGVTGAATAWDAAQRGLSVALLERG
                     DFGGATSAESLKVVHGGVRYLQHLDVVRVRESSRERRALLRMAPHLVHPMPFVVPTYG
                     HGMRGPEILAAAFTILNALTADRNRGLTDPARQVPAARIVSRARVLEWFPDINKEGLT
                     GAGVFYDGQMFNPPRLVWALVRTAARAGAAVANYCDVTSLILQGGRVIGVQVEDRLGG
                     DKFEVRGRTVVNAAGPYAEALLVRSGVRAARSVPFSRDMALVLKRRFVDGRALALQTR
                     YRDPSAVLTRGPRHLFLVPWRGRTLVGVNSLIWRDEPDRLRVSEAEVSDFVTEIAEAD
                     PRLGLTMDDVALVMAGLLPVEKGDEEGGNVSFGKRPLVVDNAREDGVQGLISAISNRY
                     TVARGVAERAVDLVYDKLSRAVRPSRTAVTRIHGGDFYRFDELVREVSRALPEGVDRG
                     VAERLAHDHGSAYGEVLRLVSERPELGARIGSSDI"
     gene            complement(1455..>2037)
                     /locus_tag="VF061_13090"
     CDS             complement(1455..>2037)
                     /locus_tag="VF061_13090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670494.1"
                     /translation="AAGDALDGLTTLALPEDEPPHPVRDLTQAARALDRARGQLELDL
                     GRRFRRRSGGWLVVDGSLAESPLWAGDERAIGVSKSHATLPFDGEDLERYLRLPLGHR
                     TSVFAPQSRSVAPVLAWALRLWDWAAKDLFHGLVRIEVAPGNGTSATADLLSRRLLAE
                     RAPLSTPDPRWDRLLYGIHSVEQYLHAREGALA"
BASE COUNT          290 a          755 c          741 g          251 t
ORIGIN      
        1 gatgtcgctg ctgccgatcc tggcgccgag ctccgggcgc tcgctcacca ggcggagcac
       61 ctcgccgtag gcggagccgt gatcgtgggc caggcgctcg gcgacgccgc gatccacgcc
      121 ttcgggcaac gcacgcgaga cctcgcgcac cagctcgtcg aagcggtaga aatccccgcc
      181 gtggatccgg gtgacggcgg tgcggctggg gcgcacggcg cggctcagct tgtcgtagac
      241 caggtccacc gcgcgctccg ccaccccgcg ggcgaccgtg tagcgattgg agatggcgga
      301 gatgagcccc tgcacgccgt cctcccgggc gttgtccacc accagcggcc gcttgccgaa
      361 gctcacgttg ccgccctctt cgtcgccctt ctccaccggc agcagaccgg ccatcaccag
      421 cgccacatcg tccatggtga ggcccagcct ggggtcggcc tccgcgatct cggtcacgaa
      481 atcgctgacc tcggcctcgc tgacgcggag gcggtcgggc tcgtcgcgcc agatgaggct
      541 gttgacgccg accagcgtcc ggcctcgcca gggcaccagg aacagatgcc gcggcccccg
      601 ggtgaggacg gccgagggat cgcggtacct ggtctggagg gcgagggcgc ggccgtccac
      661 gaagcggcgc ttgagcacga gggccatgtc ccgcgagaac gggacgctgc gcgcggcccg
      721 caccccggag cggaccagca gcgcctccgc gtaggggcca gcggcgttca ccacggtgcg
      781 cccccgcacc tcgaacttgt cgccgccgag ccggtcctcc acctggacgc cgatcacccg
      841 gccgccctgg aggatcagcg aggtcacgtc gcagtagttc gcgaccgccg cgcccgcgcg
      901 ggccgcggtc cgcaccagcg cccagaccag ccggggcggg ttgaacatct gtccgtcgta
      961 gaacacgccg gcgccggtca gcccttcctt attgatgtcg ggaaaccact ccagcacccg
     1021 ggcccgggag acgattctgg cggcggggac ctgccgggca gggtcggtga gcccccggtt
     1081 ccggtcggcc gtcagcgcgt tgaggatggt gaaggcggcg gccaggatct cggggccccg
     1141 catgccatgg ccgtaagtgg gaaccacgaa cggcatcggg tgcaccaggt ggggggccat
     1201 tcgaagcagc gcccgccgct cccggctcga ctcgcgtacc cgcaccacgt cgaggtgctg
     1261 caggtagcgg accccaccat gcacgacctt cagcgactcc gcggaggtgg ccccgccgaa
     1321 gtccccccgc tcgaggaggg cgaccgagag tccgcgctgg gcggcgtccc aggcggtggc
     1381 ggcgccggtg acgccgccgc ccaccaccag cacgtcgaat tcccggcccg cgagcgctgc
     1441 cagcgagcgg cccatcaggc gagcgccccc tcgcgcgcgt gcaggtactg ctccaccgag
     1501 tggatgccgt agagcaggcg gtcccaacgg gggtccgggg tgctgagcgg ggcccgctcg
     1561 gccagcaggc ggcgcgagag caggtcggcc gtggcggatg ttccgttgcc cggggccacc
     1621 tcgatccgca ccagcccgtg aaacagatcc ttcgccgccc agtcccagag ccggagcgcc
     1681 caggcgagga ccggcgccac gctgcggctc tggggcgcga agaccgaggt gcgatgcccg
     1741 agcgggaggc ggaggtagcg ctctaggtcc tcgccgtcga acggaagcgt ggcgtggctc
     1801 ttcgagacgc cgatggcgcg ctcgtcgccg gcccacagcg gactctccgc gagggagccg
     1861 tccaccacca gccagccgcc ggagcgccgg cgaaagcgcc ggcccaggtc gagctccagc
     1921 tgccccctgg cgcgatccag cgcgcgggcg gcctgggtga ggtcccgcac cgggtgcgga
     1981 ggctcgtcct ccggcagggc cagcgtggtg agtccgtcca gcgcgtcacc ggcggcg
//
LOCUS       DASUYN010000672         3677 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_434323, whole genome shotgun sequence.
ACCESSION   DASUYN010000672 DASUYN010000000
VERSION     DASUYN010000672.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3677)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3677
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_434323"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..653
                     /locus_tag="VF061_13095"
     CDS             <1..653
                     /locus_tag="VF061_13095"
                     /inference="COORDINATES: protein motif:HMM:NF019121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HEX6670495.1"
                     /translation="IRVPGFSTWRPGESLESRGDLRYPVIVKPLQSDASVGIAQASVV
                     QDEAALLERVSLVHERFRQPAIAEEFVDGRELYVSVIGNGDDLVILPITEMVFDKRKT
                     RAEERIATQSAKWDEDYRARRGIRNVFARPIAASTRERIESICRTAFRALWLRDYARL
                     DVRLAPDGEVWFLEANANPFISYGHDMANAAEKAGLEYYDFVQRLVDVAMARHEHA"
     gene            640..1650
                     /locus_tag="VF061_13100"
     CDS             640..1650
                     /locus_tag="VF061_13100"
                     /inference="COORDINATES: protein motif:HMM:NF027219.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative zinc-binding metallopeptidase"
                     /protein_id="HEX6670496.1"
                     /translation="MSTRRRSRERGPVPELRCICGQRLQKYWNHCPNCARALQWRDLG
                     NVTGAECFNCGWIVSDKYSWCPWCAADIYEGGFSSETPLKAPKGFRMDARCDWGCGGG
                     VQYPMGTCPWCGRPQSWDESDLFEGDCPHCGRGVDDWMNACPWCGNDATGRDLVPRAL
                     TRVRRLLLVSRIRDWGYRVLLRPGISGVDPRYPKIVEIEQRYVVGKRRQDEIPWTMLV
                     GLITHELGHSFLFHHWDWTRTRRFQRAFGDVDKAYRAMDNTWVYFQRRRIAIAPRDHV
                     STYAAKHPQEDFAETFRFYVTRRGRLRDLFAEFGQKRKGVILYEKFLVLHDFVRALRG
                     WG"
     gene            complement(1660..3288)
                     /locus_tag="VF061_13105"
     CDS             complement(1660..3288)
                     /locus_tag="VF061_13105"
                     /inference="COORDINATES: protein motif:HMM:NF024842.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX6670497.1"
                     /translation="MTSHQASPTAAVLGRIGLPQPVAELARRRWDCVVVGAGHNGLTC
                     AAYLARAGRKVLVLEARDRVGGACTMEEPWPGVRMSPCAYVAGLLHQSVIDELDLPGH
                     GFRWMPAVGGLFVPFEDGSSIQLWNDDARCEAEIARFAPGDLRGWRAMQAVKRRLRDA
                     LRPEGAGDLWLDPAPDRDEIERRLRGDAEARALLFDWSMVELVERYLGDERMHLAYLG
                     QGVIGTNASPHDRGTASVWFHHASGRMFGQPGTWGYVEGGMGMVSFLLCDIARELGAV
                     VATGVPVARIVPGDGVELASGERIRAPQVISNATPAATLRLVGDGAESGWAAQVRALP
                     TRGITAKVNLRLAELPDFTARPGRDEPHHRGQVNTPLSKDEWRAHHRSANEGLLPPRT
                     WNELYLHTVFDRSVVPDGVQTLSVFAQYVPHRFREGDWNSRRDEVGAVVLRSIARFCS
                     NLPAAVTGMEVLGPPDIEERVGLTGGHIFQGEILPEYMWERRLRARTPMPGLLLCGAG
                     THPGGSVIGVNGRNAAFEALKDGQREVRTKSGWW"
     gene            3385..>3677
                     /locus_tag="VF061_13110"
     CDS             3385..>3677
                     /locus_tag="VF061_13110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="alanyl-tRNA editing protein AlaX"
                     /protein_id="HEX6670498.1"
                     /translation="MTDRLYYTDAYLRDFDATVVDRAEDGRRVYLDRTAFYPTSGGQS
                     HDTGTLGGQAVLDVVDEDERIAHLLAAPVDGNRVRGSVDWPRRFDHMQQHTGQ"
BASE COUNT          547 a         1321 c         1273 g          536 t
ORIGIN      
        1 acatccgggt gccgggcttc tccacctggc ggccggggga gagcctcgag tcgcggggcg
       61 acctgcgcta cccggtgatc gtcaagccgc tccagtccga cgcctcggta ggcattgccc
      121 aggcctcggt ggtccaggac gaggccgccc tgctggaacg ggtgagcctg gtccatgagc
      181 gcttccggca gcccgccatt gccgaggagt tcgtggacgg gcgggagctg tacgtgagcg
      241 tcatcgggaa cggggacgac ctcgtgatcc ttcccattac cgagatggtc ttcgacaagc
      301 ggaagacccg ggcggaggag cggatcgcca cccagtccgc caagtgggac gaggactatc
      361 gcgcccggcg aggaatccgt aacgtctttg cccgcccgat cgccgccagc accagggagc
      421 ggatcgagtc catctgccgg accgcctttc gggcgctctg gctccgggac tacgctcggc
      481 tcgacgtgcg gctcgccccc gacggcgagg tctggttcct cgaggccaac gccaacccct
      541 tcatcagcta cggacacgac atggcgaacg cggcggagaa ggccgggctg gagtactacg
      601 acttcgtgca gcggctggtg gacgtcgcga tggcccggca tgagcacgcg tagacggagc
      661 cgggagcgcg gcccggtgcc cgagctgcgc tgcatctgcg gccagcggct gcagaagtac
      721 tggaaccatt gccccaattg cgcccgagcg ctccagtggc gcgacctggg caacgtcacc
      781 ggggccgaat gcttcaactg cggctggatc gtctcggaca agtattcctg gtgcccctgg
      841 tgcgccgccg acatctacga ggggggcttc tccagcgaga cgcccctcaa ggcccccaag
      901 ggcttccgga tggatgcccg ttgcgactgg ggctgcggcg gaggcgtgca gtaccccatg
      961 gggacctgcc cctggtgcgg gcggccccag tcctgggacg aatcggacct cttcgagggg
     1021 gactgccctc actgcgggcg cggagtggac gactggatga acgcctgccc ctggtgcggg
     1081 aacgacgcca ccgggcgcga cctcgtcccc cgcgcgctca cccgggtgcg ccgcctgctg
     1141 ctggtgagcc gcatccgcga ctggggctat cgggtgttac tccggcccgg catctcgggc
     1201 gtggacccgc gctaccccaa gatcgtggag atcgagcagc gctacgtcgt gggcaaacgg
     1261 cgccaggacg agattccctg gaccatgctc gtcgggctca tcacccacga gctgggacac
     1321 agcttcctgt ttcatcactg ggactggacc cggacccgcc gcttccagcg cgcgttcggc
     1381 gacgtggaca aggcctaccg ggcgatggac aacacctggg tctacttcca gcgccgccgc
     1441 atcgccatcg cgccgcggga ccacgtgagc acctacgccg cgaagcaccc ccaggaggac
     1501 ttcgcggaga ccttccggtt ctacgtgacc cggcggggaa ggctcaggga cctgttcgcg
     1561 gagttcgggc agaagcggaa gggcgtgatc ctgtacgaga agttcctggt gttgcacgac
     1621 ttcgtgcggg cgctgcgggg gtgggggtag gaccggcggt caccaccatc ccgatttggt
     1681 tcgcacctcc cgctggccgt ccttgagcgc ttcgaaggcc gcgttgcgcc cgttgacacc
     1741 gatcacgctc ccgccggggt gcgtccccgc cccgcacagg agcagcccgg gcatcggggt
     1801 ccgcgcgcgc agccgccgct cccacatgta ctcgggcagg atctccccct ggaagatgtg
     1861 cccgcccgtg agccccaccc gctcctcgat atccggcgga ccgagcacct ccatgccggt
     1921 cacggccgcg gggaggttgc tgcagaaccg ggcgatggac cgcagcacga cggcgccgac
     1981 ttcgtcgcgc cggctgttcc agtcgccctc gcggaagcgg tggggcacgt actgggcgaa
     2041 cacgctcagc gtctgcacgc cgtccggcac gacgctgcgg tcgaacaccg tgtgcaggta
     2101 gagctcgttc caggttcgcg gcggcagcag gccctcgttc gccgaccggt ggtgggcgcg
     2161 ccactcgtcc ttggagagcg gcgtgttgac ctgcccccgg tggtgcggtt cgtcgcgccc
     2221 gggccgcgcg gtgaagtccg gcagctcggc cagcctgagg ttcaccttgg ccgtgatgcc
     2281 ccgggtcggg agcgcccgca cctgggccgc ccaccccgac tccgccccgt cgcccaccag
     2341 tcgaagggta gcggccgggg tggcgttgga gatcacctgc ggcgcgcgga tacgctcccc
     2401 cgacgccagc tccacgccgt cgccgggaac gattcgcgct accgggaccc cggtggcgac
     2461 cacggcgccc agctcacggg cgatgtcaca gaggaggaag gacaccatcc ccatcccgcc
     2521 ttcgacgtag ccccaggtcc ccggctggcc gaacatgcgt cccgaggcgt gatgaaacca
     2581 caccgacgcg gtgccccggt cgtgcgggct ggcgttggtg ccgatgacgc cctggcccag
     2641 ataggccagg tgcatccgct cgtcgcccag gtagcgctcc accagctcga ccatggacca
     2701 gtcgaacagc agcgcgcgcg cctcggcatc cccccggagc cggcgctcga tctcatcgcg
     2761 gtccggggcc gggtcgagcc acaggtcccc cgcgccctcg gggcgcagcg cgtcgcggag
     2821 ccggcgcttc accgcctgca tcgcccgcca tccgcgcagg tccccgggcg cgaagcgcgc
     2881 gatctcggcc tcgcagcggg cgtcgtcgtt ccagagctgg atgctgctgc cgtcctcgaa
     2941 gggcacgaag agcccgccga ccgccggcat ccagcggaag ccgtggcccg gaaggtcgag
     3001 ctcgtcgatg acgctctggt gcagcaggcc cgccacgtag gcgcagggcg acatccgcac
     3061 cccgggccaa ggctcctcca tcgtgcacgc gccgcccacc cggtccctcg cctcgagcac
     3121 cagcaccttg cgtccggcac gcgccaggta ggccgcgcag gtcagcccgt tgtgtccggc
     3181 acccaccacg acgcagtccc accgtcgccg ggcaagctcc gccacgggct gcggcaagcc
     3241 gattcgaccg agcacggcgg cggtgggact ggcctggtgt gaggtcatga cagggagaat
     3301 gggtggtata gcggtagggc ggtagggcgg taaggcggta gggcacccta ccgccctggc
     3361 ggcctgccgg cgattctccc ccgtatgacc gaccgcctgt actacaccga tgcctacctc
     3421 cgcgacttcg acgccaccgt ggtggatcgg gccgaggacg ggcgtcgggt ctatctcgat
     3481 cggaccgcct tctatcccac ttccggcggc cagtcccacg ataccggcac ccttggcggt
     3541 caggccgtgc tggacgtcgt ggacgaggac gagcggatcg cccacctgct cgcggcgccg
     3601 gtcgatggga accgcgtacg cggcagcgtg gactggcccc ggcggttcga tcacatgcag
     3661 cagcacacgg gccagca
//
LOCUS       DASUYN010000673         2363 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1755882, whole genome shotgun sequence.
ACCESSION   DASUYN010000673 DASUYN010000000
VERSION     DASUYN010000673.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2363)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2363)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2363
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1755882"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            153..479
                     /locus_tag="VF061_13115"
                     /pseudo
     CDS             153..479
                     /locus_tag="VF061_13115"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
     gene            479..2002
                     /locus_tag="VF061_13120"
     CDS             479..2002
                     /locus_tag="VF061_13120"
                     /inference="COORDINATES: protein motif:HMM:NF015995.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter
                     substrate-binding protein"
                     /protein_id="HEX6670499.1"
                     /translation="MGLTALLLLLAVQTPAPRPVVVASKPFGESYLLAEMFAQLLEAR
                     GIRVDRRPGLGATEIAFRAIRTGSADVYPEYTGTGLLAILGEPPARDPGEVYDRVTRE
                     FRRRWNVRWLPPLGFENTYAIAVRRETAERHGLATLSDLARVSPTLRAGLTADFIGRP
                     DGLPGLGRAYGLRFAEVRALLPAVKYQALAAGEVDVIDGYSTDGLIARYDLVVLEDDR
                     RFFPPYQAAALVSGTLVERLPAAVVALTELSGRLDEPTMRRLNQRLEVGGEAVERVAT
                     DALADLGLIGSVAGPDASPRSREGGLVSYLLDRRRDLLRMAGRHLLLVALSLSAAIAV
                     AVPLGLALERLPRGAEAAVRAVGLLQTLPGIALLAFMIPLLGIGLLPAVVALFLYSLY
                     PILRNTWTGVRDAAPEAVAAGKALGMTPAQILRHVRLPLAAPVIMAGVRTAAVINVGT
                     ATLAAFIGAGGLGDPIAAGLALSDTRMILSGAIPAALLALGVDALLAGVERLVRPAV"
     gene            2060..>2363
                     /locus_tag="VF061_13125"
     CDS             2060..>2363
                     /locus_tag="VF061_13125"
                     /inference="COORDINATES: protein motif:HMM:NF018004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1015 family protein"
                     /protein_id="HEX6670500.1"
                     /translation="MRLNPFRAVRPRPELADQVAAVPYDVVNRAEAAELARGNPHSFL
                     HVGRSDIDLPEDVDPYDPRIYRGAREALDRFLARGTLLRDPEPRLFLYRQVMDGRAQ"
BASE COUNT          247 a          893 c          869 g          354 t
ORIGIN      
        1 aggacggcgg cctgctgccg cactggccgg tgcaacgcaa cgtggcgctg gtcccatggc
       61 tccagcggca gccggccgcg gccgcggcgg ccgagcgggc gctccggctg gtcgggctcg
      121 agcccgagct ctaagcgacc cgacggccgg ccgagctgtc cggcggccag cggcagcgag
      181 tggcggtcgc gcgcgcgctc gcggccgatc ctgaggtggt gctgctcgac gagccgttcg
      241 gcgccctcga cgccatcacc cgcgccgacc tccagggcgt cttcctcgag ctgcgccgcg
      301 agctcgggct gaccgcggtg ctcgtcaccc acgatctcgc cgaggcgttc ctgctggccg
      361 accgcatcgc ggtgctgcgc ggggggagcc tcgcgcagct cgcgccgggc gccgagctgc
      421 gcgcgtcgcc ggcgacgccg tacgtgcgcg agctgctccg gcgcgcccgc gtcgcctgat
      481 ggggctcacg gcgctcctgc tcctgctggc ggtgcagacg cccgcccccc gaccggtggt
      541 cgtggcctcg aagccgttcg gcgagtcgta ccttctggcc gagatgttcg cccagctgct
      601 ggaggcgcgc ggcatccggg tggatcgccg gccggggctc ggcgccaccg agatcgcctt
      661 ccgcgcgatt cgcaccggct ccgccgacgt gtacccggag tacaccggca ccggcctcct
      721 cgcgatcctg ggagagcccc ccgcgcggga tccgggggag gtctacgacc gggtgactcg
      781 cgagttccgc cggcggtgga acgtccgctg gctcccgccc ctgggcttcg agaacaccta
      841 tgcgatcgcg gtccggcggg agacggcgga gcgccacggg ctcgcgaccc tgagcgacct
      901 cgcgcgcgtg agtccgaccc tccgtgccgg gctcaccgcc gacttcatcg gccggcccga
      961 cggcctgccg ggactcggcc gcgcctacgg tctccgcttc gccgaggtgc gcgccctgct
     1021 ccccgcggtg aagtaccagg cgctcgcggc cggagaggtg gacgtcatcg acggctactc
     1081 caccgacgga ctcatcgcgc gctacgacct ggtcgtgctg gaggacgacc ggcgtttctt
     1141 tcccccgtac caggccgcgg cgttggtgag cggcacgctg gtggagcgcc tgccggcggc
     1201 cgtcgtggcg ctgaccgagc tgagcggccg gctggacgag ccgaccatgc ggcgtctcaa
     1261 ccagcggctg gaggttgggg gcgaggccgt ggaacgggtc gcgaccgatg ccctcgccga
     1321 tctcggtctc atcgggtccg tggcagggcc ggatgcatcg ccccgtagcc gggagggcgg
     1381 gttggtctcc tatctcctgg accgacggcg ggacctcctg cggatggccg ggcggcatct
     1441 ccttctcgtc gccctctcgc tctccgcggc gatcgccgtg gcggtcccgc tgggcctggc
     1501 gctggagcgc ctcccccgtg gcgcggaggc ggcggtccgc gccgtggggc tgctgcagac
     1561 cctgcccggc atcgcgctcc tcgccttcat gatcccgctg ctcgggatcg ggctgctccc
     1621 cgccgtcgtg gcgctcttcc tctactcgct ctatcccatt ctgcggaaca cctggaccgg
     1681 tgtgcgcgat gccgcgccgg aggcggtcgc cgccgggaag gcgctcggca tgacgccggc
     1741 gcagatcctc cgccacgtcc ggctcccgct ggccgcgccc gtcatcatgg cgggcgttcg
     1801 caccgcggcg gtgatcaacg tgggcaccgc cacgctggcg gcgttcatcg gggccggcgg
     1861 gctgggcgat ccgatcgcgg ccgggctggc gctgtcggac acgcgaatga tcctctcggg
     1921 cgcgatcccg gccgccctgc tggcgctcgg cgtggacgcg ctcctcgccg gtgtcgagcg
     1981 gctggtgcga ccggcggtct gagccggcct gtccggtgct tgacgcccgc tctcgcgccc
     2041 gggtaggata gggcccgcca tgcgcctcaa cccgttccgc gccgttcgcc cgcgccccga
     2101 actcgccgac caggtcgccg ccgtgcccta tgacgtggtg aaccgcgcgg aggcggccga
     2161 gctcgcgcgg gggaatccgc acagcttcct gcacgtgggc cgctccgaca tcgacctgcc
     2221 cgaggacgtg gacccctacg acccgcggat ctatcgcggg gcccgggagg cgctggaccg
     2281 gttcctggcg cggggcacgc tgctccgcga tccggagcca cgtctctttc tctatcgtca
     2341 ggtgatggac ggccgggcgc aga
//
LOCUS       DASUYN010000674         2821 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1316366, whole genome shotgun sequence.
ACCESSION   DASUYN010000674 DASUYN010000000
VERSION     DASUYN010000674.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2821)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2821)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2821
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1316366"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..941
                     /locus_tag="VF061_13130"
     CDS             <1..941
                     /locus_tag="VF061_13130"
                     /inference="COORDINATES: protein motif:HMM:NF013324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="slipin family protein"
                     /protein_id="HEX6670501.1"
                     /translation="AALAAGVIGAAGVAGALFLAGIAPPLAAVAGLAVGILLALSIKY
                     TDQWEKAVLLRLGRYRGLRGPGYFAIVPVLDRVVYTIDQRIRTTAFGAESCLTRDTVP
                     VNVDAIAFWIVRDAERAALEVQDYDEAVVLSAQTALRDAIGKHDLAELIQARVELGHG
                     LKMALEQKMATWGIQVQSVEIRDVIIPAALEDAMSRQAQAERERQARIILGTAETEIA
                     HKFVEAADAYRDHPAAMNLRAMNMLYESIVKRGSLMVVPSGLADSLNAPSLLGVAGAS
                     RLVPGSPGDAPATTGERPAGAVREARGVAPGLPVGL"
     gene            1207..2376
                     /locus_tag="VF061_13135"
     CDS             1207..2376
                     /locus_tag="VF061_13135"
                     /inference="COORDINATES: protein motif:HMM:TIGR00391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase small subunit"
                     /protein_id="HEX6670502.1"
                     /translation="MYVPSSIPWADGETLGQHLESRGVSRRQFLEFCGGLAAMLGLDS
                     LMVPRIARALEVLTRPSVVWIQLQECTGCVESVLRTAEPTIGNLVLDLVSLDYSHTLM
                     AAAGTAAEDALQAAMKTNAGKYLLLVTGSVPLSDDGIYLTIGGRTAKEILEEAAQGAA
                     AVIAIGACAHYGSVQAARPNPTGAVGVRKIVSDKPVVNIAGCPPIGDVVTATIVHYLT
                     FGRIPELDTEGRPLFAYGARIHDQCPRRANFDAGQFVEAFDDEAARKGWCLYEVGCKG
                     PATFSPCPIFQWNTRTSWPIGAGHPCIGCTEPFFWDTMSPFYTRLPDVGGFGVEQRVD
                     LIGAALAAGATAGVAAHAIATGVHQVRERRKARELPVLGGTQPPPEGPGAQGRGE"
     gene            2377..>2821
                     /locus_tag="VF061_13140"
     CDS             2377..>2821
                     /locus_tag="VF061_13140"
                     /inference="COORDINATES: protein motif:HMM:NF012592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-dependent hydrogenase large subunit"
                     /protein_id="HEX6670503.1"
                     /translation="MATRVVVDPITRIEGHLRIEAQAENGKISNAWATSTQFRGIEVI
                     MQGRDPRDAWAFTQRICGVCTVVHAVASCRAVEDALGITIPPNANLIRNLVHGMQFIQ
                     DHVIHFYHLHALDWVDVVSALKADPAAAAKLAQSLSPWPNNSEPRF"
BASE COUNT          426 a          958 c          982 g          455 t
ORIGIN      
        1 ctgccgcgct ggcggcaggg gtgatcggtg cggccggcgt ggccggggca ctgttcctcg
       61 ccggcatcgc accgcccttg gcggcggtgg ctggcctggc ggtgggaatc ctgctcgcgc
      121 tctcgatcaa gtacaccgac cagtgggaga aggccgtcct cctgcggctc ggccgttacc
      181 gcgggttacg tggtcccggg tacttcgcca tcgtgccggt cctcgatcgg gtcgtctaca
      241 ccatcgatca acggattcgg accacggcgt tcggcgccga gtcgtgcctc acccgcgaca
      301 cggtccccgt caacgtcgat gccatcgcct tctggatcgt gcgggacgcc gagcgtgccg
      361 ctttggaggt gcaggactac gacgaggcgg tcgtgctctc cgcgcaaacg gcgctccggg
      421 atgccatcgg taagcacgat ctggcggagc tgatccaggc cagggtggag ctcggccatg
      481 ggctcaagat ggcgctggag cagaagatgg cgacctgggg catccaggtg cagtcggtcg
      541 agatccgcga cgtcatcatt cccgccgccc tggaagatgc catgtcgcgg caggcccagg
      601 ccgaacggga gcgacaggca cggatcattc tcggcaccgc ggaaaccgag atcgctcaca
      661 agttcgtcga agcggcggac gcctaccgcg accacccggc ggccatgaac ctccgggcga
      721 tgaacatgct gtacgagagt atcgtcaagc gcggctcgct catggtcgtg ccgtcgggat
      781 tggccgactc gctgaatgcc ccatcgctgt tgggtgtggc cggggccagc aggctggttc
      841 ccggcagccc tggcgacgcg cccgcgacga cgggcgagcg gccggccggg gcggtgagag
      901 aggcacgggg cgtcgccccc gggttgccgg tggggttgtg atgctcatgg gagtgcggcg
      961 ggaccccgcc ccccggcggc ctcgtcccga cgtcgtcttg cccctggggc agggcggccg
     1021 gtggcgacta tcccggtggc gggcccgacc atctctcggg ttcgccgcca ccgcgggaga
     1081 atgcgctgca cggcccgcgg ccggctaaaa gtttcttcat gctcgccttt ccgattttgc
     1141 tattctgtag tcctgccgca caacaatcac gtccatcgag gtccggcccg catcggggga
     1201 gtcgagatgt acgtccccag tagtatcccg tgggccgatg gggaaaccct tggccaacac
     1261 ctggagtccc gtggcgtctc ccggcgccag tttctggagt tctgcggcgg tctcgccgcc
     1321 atgctcggcc tcgacagcct gatggtgccc cggatcgccc gggcgctcga ggtcctcacg
     1381 cgcccgagcg tggtctggat tcagctccag gagtgtactg gttgcgtgga gagcgtgctc
     1441 cgcaccgccg agcccacgat cggcaacctc gtgctggacc tggtctccct ggactattcc
     1501 cacaccctga tggcggccgc tggcaccgcc gcggaggacg cgctgcaggc ggcgatgaag
     1561 accaacgccg ggaaatacct cctgctcgtc accggctccg tgccgctctc ggatgacggg
     1621 atctatctca cgatcggtgg ccggacggcg aaggagatcc tcgaagaggc ggcccagggc
     1681 gccgccgcgg tcatcgccat cggcgcctgc gcccattacg gaagcgtcca ggcggcacgg
     1741 cccaacccga ccggcgcggt cggcgtccgg aagatcgtct ccgacaagcc ggtggtgaac
     1801 atcgccggct gccccccgat cggcgacgtc gtgaccgcga cgatcgtcca ctatctcacc
     1861 ttcggccgaa ttcccgagct ggatactgaa gggcggcccc tgttcgccta cggcgcccgg
     1921 attcacgatc agtgtccccg gcgcgcgaac ttcgacgccg gacagttcgt cgaggcgttc
     1981 gacgacgagg cggcgcgcaa gggatggtgc ctgtatgagg tggggtgcaa gggaccggcg
     2041 accttctcgc cctgcccgat cttccagtgg aacacccgca ccagctggcc catcggcgcg
     2101 ggacatccct gcatcggctg caccgagccg ttcttctggg acacgatgtc gcccttttac
     2161 acccggctgc cggatgtggg cgggttcggc gtggagcagc gggtggatct catcggcgcc
     2221 gcgctcgcgg cgggcgcgac ggcgggagta gccgctcatg ccatcgccac gggggtgcac
     2281 caggtccggg agcggcgcaa ggcgcgcgag ctgccggtgc tgggcgggac tcaaccgcct
     2341 ccggaggggc cgggggccca gggaaggggg gaatagatgg ccacccgggt cgtggtcgat
     2401 ccgatcaccc ggatcgaggg acatctgcgg atcgaggcgc aggcggagaa cggcaagatc
     2461 agcaacgcct gggcaacgtc gacccagttc cgcggcatcg aggtcatcat gcaggggcgc
     2521 gacccccgcg atgcgtgggc cttcacccag cggatctgcg gcgtctgcac cgtggtccac
     2581 gcggtggcgt catgccgggc cgtcgaggac gcgctcggca tcaccatccc cccgaacgcg
     2641 aacctgatcc gcaatctggt gcacgggatg cagttcattc aggaccacgt gattcacttc
     2701 tatcacctgc acgcgctcga ctgggtggac gtggtgagtg ccctcaaggc cgatccagcg
     2761 gccgcggcca agctggccca gagcctctcg ccctggccca acaactccga gccgcgcttc
     2821 c
//
LOCUS       DASUYN010000675         3550 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_653164, whole genome shotgun sequence.
ACCESSION   DASUYN010000675 DASUYN010000000
VERSION     DASUYN010000675.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3550)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3550)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3550
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_653164"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..865
                     /locus_tag="VF061_13145"
     CDS             <1..865
                     /locus_tag="VF061_13145"
                     /inference="COORDINATES: protein motif:HMM:NF019850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cyanophycin synthetase"
                     /protein_id="HEX6670504.1"
                     /translation="FLTLHPTVALVNNVEADHLECYGSVEALEDAFVEFAGRARVALV
                     SADDPGAQRIASRVAGSRRFGFAGDSDIRIEDVVQGARGTEATVSWRGGRSIRLRLRV
                     PGIHNLRNAVGALAAVEALGGELEPAVEALAAFSGVGRRFERLGEHGGVAVVDDYAHH
                     PSELVATLAAARQAFPGRRLVAVFQPHLYSRTLAHGEAMGAALAAADLVFVTEIYAAR
                     EQPVAGVSGRQVAEAAARAGADARFEPVRADVGQRVREALEPGDVVLTLGAGDITRVA
                     PELVRWLGAAA"
     gene            844..1536
                     /locus_tag="VF061_13150"
     CDS             844..1536
                     /locus_tag="VF061_13150"
                     /inference="COORDINATES: protein motif:HMM:NF020067.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsQ-type POTRA domain-containing protein"
                     /protein_id="HEX6670505.1"
                     /translation="MAGRRRLSRALWLLGAAAVAWGLWLVVPLGLRHLEFFRVRRVEI
                     VGMQYLDAARVLDAAEIPPRASIFDDHAPIAARLRALPGVEAAEIGHRAPGTLRIELA
                     EAVPVALTPRGDRLAMVNARAQVLPFDPLGSSPDLPVLIGGGALVAGALARVQELDPG
                     LFARIDAAWRVGPDVVFEVEERWFWFDSGLTAEDIRAVTAVEQALARQGRAYRELDGR
                     FDGQVVVRQGRA"
     gene            1533..2786
                     /gene="ftsA"
                     /locus_tag="VF061_13155"
     CDS             1533..2786
                     /gene="ftsA"
                     /locus_tag="VF061_13155"
                     /inference="COORDINATES: protein motif:HMM:TIGR01174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HEX6670506.1"
                     /translation="MSAQPQRLVSALDLGSTKVVALIAEVTGDQRDAGCRILGLGVER
                     SAGIRRGVVRDIEETTRAIDKAMKSAQRMAGVQVGSVYCGIAGEHVAGRSSHGMVSVT
                     GDEIRTSDVARVNDMASNVSFGRDHELLHAIPQDYLIDQQGGINEPIGMTGSRLEAEV
                     YLVTVLSSVLQNLRKSVERAGYHVAEFVLEPLAASLAVLTPDEIELGCAIVELGGGST
                     NVSIFHNGKIRHTGSLLCAGGHVTADIVHGLQVTQLDAERLKERHGAGFEPLVPESDV
                     IDLPSTPGQGARNAQRRVLAHIMHMRLQEVLEYALDEVTRAGYHQRLPAGVILTGGGA
                     LTPGIVELAREVFAMPARIGIPGQRLRGLADSVESPRMAVPAGMVLYGARQVATSGGF
                     GTGSRKSPAVEKVLAPVKRWLQDFF"
     gene            2809..>3550
                     /gene="ftsZ"
                     /locus_tag="VF061_13160"
     CDS             2809..>3550
                     /gene="ftsZ"
                     /locus_tag="VF061_13160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HEX6670507.1"
                     /translation="MIFELEDNVVQTARMKVVGVGGGGGNAVNRMIEDQLGGVEFISV
                     NTDAQALALSKSQVKIQIGRKLTRGLGAGARPEIGRQAIEENRDEVAVAVQGADMVFV
                     TCGMGGGTGTGAAPIVSQMAREAGALTVGIVTKPFLFEGRRRMRQAETGISEMRKNVD
                     TMIVVPNERLLAVVGKGIPFQDALKKADEVLLHATQGIASLITSTGIINVDFADVRTV
                     MQNGGAALMGTGIGRGDNRALEAAQQAIS"
BASE COUNT          504 a         1162 c         1359 g          525 t
ORIGIN      
        1 attcctgacg ctccatccca ccgtggccct cgtcaacaac gtcgaggccg accaccttga
       61 gtgctacggg tcggtagaag cgctggaaga cgcgttcgtg gaattcgcgg gtcgcgcgcg
      121 ggtcgcgctg gtgagcgccg acgatccggg ggcgcagcgc atcgcctcgc gtgtggctgg
      181 ctcgcggcgg ttcggcttcg ccggggattc cgacatccgg atcgaggacg tggtgcaggg
      241 cgcgcgcggg accgaggcga ccgtctcctg gaggggaggc cgctccattc gactgcgcct
      301 cagggttccc ggcattcaca acctgcggaa cgccgtgggc gctctggccg ccgtcgaggc
      361 gctgggtgga gaactggagc cagcggtgga agccctggcc gcgttctccg gcgtcggccg
      421 ccggttcgag cgcctgggcg agcacggcgg ggtcgccgtg gtggacgact acgcccacca
      481 cccgtccgag ctcgtggcga cgctggcggc cgcccggcag gcctttccgg gtcgcaggct
      541 ggtcgccgtg ttccagccgc acctgtactc ccgaacgctg gcgcacggtg aggcgatggg
      601 ggcggcgctc gcggcggccg acctggtgtt cgtgaccgag atctatgccg cgcgggagca
      661 gccggtcgcg ggggtgagcg ggcggcaggt ggccgaggcg gcggcgcggg cgggcgccga
      721 tgcccggttc gagccggtgc gcgccgatgt cggacagcgg gtgcgggagg cgctcgagcc
      781 cggcgacgtc gtgctcaccc tgggggccgg tgacatcacc cgggtggcac cggagctggt
      841 tcggtggctg ggcgccgccg cctgagccgc gcactctggc tgctgggagc ggcggcggtc
      901 gcttgggggc tctggctggt cgtcccactc ggtctccggc acctggagtt ctttcgggtg
      961 aggcgggtgg agatcgtcgg aatgcagtat cttgatgcgg ctcgtgtgct ggatgctgcg
     1021 gagatcccgc cgcgcgcgag catcttcgac gatcacgcgc cgatcgcggc gcggctccgg
     1081 gccctgccgg gcgtagaggc tgccgagatc gggcaccgcg cccccggcac gctgcgcatc
     1141 gagctggcgg aggcggtgcc ggtcgcgctc acgccgaggg gcgatcgcct cgccatggtg
     1201 aacgcgcggg cccaggttct gcccttcgat ccgctcggct cctcgcccga tctgccggtg
     1261 ctgatcggcg gcggcgcgct ggtcgcgggg gcgctggccc gggtccagga gctcgatccc
     1321 ggcctgttcg cgcggatcga tgccgcgtgg cgagtgggcc ctgacgtggt gttcgaggtg
     1381 gaggagcgct ggttctggtt cgattccggt ctgacggcgg aggacattcg agcggtgacg
     1441 gcggtggagc aggccctcgc ccgacagggg cgcgcgtatc gggagctgga cgggcggttc
     1501 gacggccagg tcgtcgtccg ccagggacgc gcatgagcgc tcagccgcag cggctggtct
     1561 ccgcactcga tctcggctcc accaaggtgg tcgccctcat cgccgaggtg acgggcgacc
     1621 agcgcgatgc cggctgccgc atcctgggtc tgggcgtcga gcggagcgcc gggatccggc
     1681 ggggcgtggt tcgcgacatc gaggagacca cccgggccat cgacaaggcg atgaagagtg
     1741 cccagcggat ggccggggtg caggtgggat cagtctactg cggcatcgcg ggggagcacg
     1801 tggccggccg cagcagtcac ggcatggtct ccgtgaccgg cgacgagatc cggaccagcg
     1861 acgtggcccg ggtgaacgac atggcgagca atgtcagctt cgggcgcgac cacgagctgc
     1921 tgcacgccat tccccaggac tacctgatcg accagcaggg aggcatcaac gagccgatcg
     1981 gcatgacggg ctcgcggctg gaggccgagg tctacctggt gaccgtgctc tccagcgtgc
     2041 tgcagaacct ccggaagtcc gtggagcgcg ccgggtatca cgtggccgag ttcgtgctgg
     2101 agccgctggc cgcctcgctc gccgtgctga cgccggacga gatcgagctg ggctgcgcga
     2161 tcgtcgagct gggcgggggc tccaccaacg tctcgatctt ccacaacggg aagatccgcc
     2221 acaccggctc gctgctctgc gccggcggcc acgtcaccgc cgacatcgtg cacggcctcc
     2281 aggtcaccca gctcgatgcg gagcggctca aggagcggca cggcgccggg ttcgagccgc
     2341 tggtcccgga gagcgacgtc atcgacctgc cgagcacgcc ggggcagggg gcgcgcaacg
     2401 cgcagcgccg ggtgctggcg cacatcatgc acatgcggct ccaggaagtg ctggagtacg
     2461 cgctggatga agtgacgcgt gcaggctatc atcagcgctt gcctgccgga gtgatcctca
     2521 caggaggcgg tgcgctgacg ccgggaatcg tggagctggc ccgcgaggtc ttcgcgatgc
     2581 ccgcgcgcat cggcattccg ggccagcgcc tgcgcggtct ggcggacagc gtggaatcgc
     2641 cgcgaatggc ggtgccggcg ggaatggtcc tctacggtgc caggcaggtc gcgaccagcg
     2701 gcggattcgg gaccggttcc cggaagtcgc cggcggtgga aaaggtgctc gctccggtca
     2761 agcggtggct ccaggacttc ttctgagcag ttcccggggg aaccaaccat gatctttgag
     2821 ttggaagaca acgtcgtcca gaccgcgcgc atgaaggtcg tcggcgtcgg cggcggtggc
     2881 ggcaatgccg tcaaccgcat gatcgaggac cagctgggcg gcgtcgagtt catctcggtg
     2941 aacaccgacg cccaggcgct cgcgctgtcc aagtcccagg tgaagatcca gatcgggcgc
     3001 aagctgaccc ggggtctggg ggccggggcc cgccccgaga tcgggcgcca ggccatcgag
     3061 gagaaccggg acgaggtcgc cgtcgcggtc cagggcgcgg acatggtgtt cgtcacctgt
     3121 ggcatgggcg gcggcaccgg caccggcgcc gcgccgatcg tgtcccagat ggcccgcgag
     3181 gccggagcgc tcacggtcgg catcgtcacc aagccgttcc tcttcgaggg acgccgccgg
     3241 atgcgacagg ccgagaccgg catctcggag atgcggaaga acgtggacac catgatcgtg
     3301 gtgcccaacg agcgactcct cgcggtggtg ggcaagggga tcccgttcca ggacgccctc
     3361 aagaaggccg acgaggtcct cctccacgcg acccagggca tcgccagcct catcaccagc
     3421 actggcatca tcaacgtgga cttcgccgac gtccgcaccg tcatgcagaa cggcggggcc
     3481 gcgctcatgg gcaccggcat cgggcggggg gacaaccgcg cgctcgaggc ggcccagcag
     3541 gcgatctcca
//
LOCUS       DASUYN010000676         6972 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_654310, whole genome shotgun sequence.
ACCESSION   DASUYN010000676 DASUYN010000000
VERSION     DASUYN010000676.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6972)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6972)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6972
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_654310"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..730
                     /locus_tag="VF061_13165"
     CDS             <1..730
                     /locus_tag="VF061_13165"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HEX6670508.1"
                     /translation="IVRRYLERAMAPNLAAVLEGRDRRLRREYVVVSAHLDHVGVRPG
                     RADSIFNGADDNASGVAGLLELAEAFSRREARPARSLLFLVPSGEEKGLWGSAYYVRH
                     PTVPLKDVVADLNLDLIGRNWGDSVIVTGPEMSSLGETLHRVTAAHPELRMAPVADRW
                     PEERIFYRSDHYSFALRRVPVLFFTSGTHADYHQPTDAADRIDTEKASRLVRYVFYIG
                     AAVANDPRRPRWNPGSYERLVEER"
     gene            727..2247
                     /locus_tag="VF061_13170"
     CDS             727..2247
                     /locus_tag="VF061_13170"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX6670509.1"
                     /translation="MTLRIGAGLALACLTGPLAAQAPEPVRAASDAAAGITAGDVARR
                     IGVLAHDSMLGRDTPSRGLELTARYVADEFRRFGLRPGGEDGTWFQRYPITRRRMDLG
                     RSRVVLKAGTATATATLDASARHVSGDIPREAVTGPVILVGGPVTPEAVGEMRLRDKV
                     VLYVHDYSRKIPVNATQVGRAIRVSGARAIVAVSNLDSAAFAARVPRSAPERYGMELR
                     LGSPPSVEVSEAVIAPVLRAAGVSLAEVRRATEPVSRDLPGASASVELKEKVTDSLSA
                     PNTIGIVEGSDPALRDEYLVFSAHMDHVGITPGPRDSINNGADDNASGTAGVIELAEA
                     FSRPGARPRRSIVFLTVSGEEKGLWGSRWFSEHPTVPLEQMVANINLDMLGRNWADTI
                     VAIGKEHSDLGATLERVNAAHPELRMAAINDRWPEERFYFRSDHYNFARKGVPAIFFF
                     NGVHEDYHRVTDSPEKINSEKESRILRLLYYFGREIGDAPARPKWDEESRRLIVEE"
     gene            complement(2271..3194)
                     /locus_tag="VF061_13175"
     CDS             complement(2271..3194)
                     /locus_tag="VF061_13175"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX6670510.1"
                     /translation="MPATRPAAPAARPPLAANLGMLLVALIWGVNFSVTKGAFATFPS
                     LAFTGVRFGLASLLLVPLVRRLEGAGTLPKGALPRLVVLGVVGNTLYQLAWISGLERT
                     TASNSALILASMPTIVAVMAVALRLEPFRPKVVGGVLVASLGVVLVVAARGTGFGPAT
                     MAGDLLTLAAVFCWAGYTLGLRGLPPQVSPLRVTMVTTVAGAPVLLLAGLPAMLAMDW
                     RAVGWEGWSALAYSTLLSLLVAYLIWNRSVKVVGPSRTVIYMCLTPLIAVIAAALLLG
                     ERPRPLQAIGAALILLGVVLTVGQRSETPGG"
     gene            3270..5069
                     /gene="lepA"
                     /locus_tag="VF061_13180"
     CDS             3270..5069
                     /gene="lepA"
                     /locus_tag="VF061_13180"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor 4"
                     /protein_id="HEX6670511.1"
                     /translation="MSQSRIRNFCIVAHIDHGKSTLADRLIEATGAVEKRQMREQLLD
                     TMDLERERGITIKLNAVRMSYTARDGTEYELNLIDTPGHVDFTYEVSRSLAACEGAIL
                     VVDASQGVQAQTLSNLFLAMDAGLEIIPVLNKIDLPGAEPERRAQEIMDLIGAKREEI
                     LAVSAKEGTGVPQLLEAVVARVPPPKGREEAPLRALIFDSYYDRYRGAIPSIRVVDGV
                     VRDGMEITFWAHPDDVYHVDEVGYLQLGQRPATQLEAGEVGYLVASLRDVRDARVGDT
                     ILDAHDRAAELLPGYRDVKSMVFAGLYPTDSDQYEGLRDALEKLRLNDASLHYEPESS
                     TALGFGFRCGFLGLLHMEIVQERLEREFNLDLISTVPTVEYHVYTADGAMMLLENPSN
                     LPDPASIDRIDEPYVKARIMAPAEYIGGIMKLGQERRGVYHGMHYIDTARVEFHFDFP
                     LGEIVLDFYDKLKSLSRGYASLDYEMAGYRESDLVKLDMLINGDPIDAFSVIIHRDKA
                     QEYGRKVAEKLKELIPRQLYQVAIQAAIGNKIIARETISAFRKDVLAKCYGGDITRKR
                     KLLEKQKEGKKRMKQIGAVEIPQEAFLAVLQVE"
     gene            5066..6118
                     /gene="waaF"
                     /locus_tag="VF061_13185"
     CDS             5066..6118
                     /gene="waaF"
                     /locus_tag="VF061_13185"
                     /inference="COORDINATES: protein motif:HMM:TIGR02195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008920 - lipopolysaccharide
                     heptosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HEX6670512.1"
                     /translation="MTEGRGDGGTGGPSVLVIQTAFLGDVVLTTPLLTALAGRHGPVD
                     VVTTPGAAPLLEGHPAVRAVIRYDKKGRDAGLGGLRRVGAGLRERRYARAYLPHRSWR
                     SAVLALLARVPERTGFADSAAAITYTTRVPRPRTGHEVERLLALAGRRAGATPPVSLA
                     LGPEDEAAAERWLAEQGVPAGFTAMAPGAIWGTKRWPYYPELAASVEGPIVVVGGPED
                     AELGRGIVAAAPGRAWNAAGRLSLRGSAVLLRRARALVTNDSAPLHLASAVGTPVVAL
                     FGPTAPEQGFGPRSSRSLALGHAGLRCRPCSAHGPQVCPLGHHRCMRELPAETVAEAL
                     AMVAEAEDRGAIRSRH"
     gene            6096..>6972
                     /locus_tag="VF061_13190"
     CDS             6096..>6972
                     /locus_tag="VF061_13190"
                     /inference="COORDINATES: protein motif:HMM:NF012692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HEX6670513.1"
                     /translation="MRFVLGIDIGGTNLVVGCVAEDGSTLHALATAPTHAEAGASDVV
                     DRLVALAQGCIAQARRELPGIEIAGVGVGAPGPLDTRSGVVLLTPNLGWVNMPLRQII
                     HDRVALPAELDNDANCAVLGEWWVGAARGTRHAIGITIGTGIGGGLILDGRLYHGASD
                     VAGEIGHTTIDTEGRRCKCGNYGCLEAYASGPNIALRAIEAMEAGAETRLPTYVGGDT
                     SKITAQTVYQAAHDGDELALEVVNDTAKFLGVGVANLLNIFNPEVVVICGGVTLAGDH
                     LFVPLRRETARRAFKP"
BASE COUNT         1085 a         2438 c         2517 g          932 t
ORIGIN      
        1 gatcgtgcga cgctatctcg agcgcgcgat ggcgccgaac ctggcggccg tcctggaggg
       61 acgggatcgc cggctgcgcc gtgagtacgt ggtcgtgagc gcccatctcg accacgtcgg
      121 cgtgcgaccc gggcgggccg acagcatctt caacggcgcc gacgacaacg cctcgggtgt
      181 ggccggcctg ctggagctgg cggaggcctt cagccggcgc gaggcgcggc cggcgcggtc
      241 gctcctcttc ctggttccca gcggcgagga gaagggcctg tggggcagcg cgtactacgt
      301 gcgtcacccg acggtgccgc tgaaggacgt ggtcgccgat ctcaacctgg acctgatcgg
      361 ccgcaactgg ggcgactcgg tgatcgtgac cggcccggag atgtccagtc tgggcgagac
      421 cctccaccgg gtgaccgccg cgcaccccga gctgcgcatg gctccggtag cggaccggtg
      481 gccggaggag cggatcttct accgctctga ccattacagt ttcgccctgc ggcgggtgcc
      541 cgtgctgttc ttcaccagcg gcacccacgc ggactatcac cagcccaccg acgcggcgga
      601 ccgcatcgac acggagaagg cgtcgcggct ggtccgctac gtcttctaca tcggtgccgc
      661 ggtggccaac gacccccggc gcccgcggtg gaacccgggc agctacgaac gactcgtgga
      721 ggaacgatga cgctcaggat cggcgcggga ctcgcgctgg catgcctcac cggcccgctc
      781 gcggcgcagg cgccggaacc ggtgcgggcc gcctccgacg ccgccgccgg catcaccgcg
      841 ggggacgtgg cgcggcggat cggggtcctg gcccacgact cgatgctggg ccgtgacacg
      901 ccgagtcggg gcctcgagct cacggccaga tacgtggcgg acgagttccg ccgcttcggc
      961 ctccgtcccg gtggcgagga tggcacctgg ttccagcgct acccgatcac ccggcggcgg
     1021 atggacctgg gccggtcgcg cgtggtgctc aaggcgggca cggcgaccgc gaccgcgacg
     1081 ctcgacgcga gcgcccggca cgtgagtggt gacattcccc gcgaggcggt caccggcccc
     1141 gtgatcctgg tcggtggccc ggtgacgccg gaggcggtcg gggagatgcg cctccgcgac
     1201 aaggtcgtgc tgtacgtcca cgactactcg cggaagattc cggtgaacgc cacccaggtg
     1261 ggccgggcga tccgggtcag cggggctcgc gccatcgtcg cggtgtcgaa tctcgactcc
     1321 gcggctttcg ccgcccgggt gccccggtcc gcgccggagc ggtacggcat ggagctgcgg
     1381 ctcggctcgc cgccctcggt ggaagtgagc gaggcggtca tcgcgccggt gctccgggcc
     1441 gccggcgtga gcctggcgga ggtgcgccgc gcgacggagc cggtgtcccg cgacctgccc
     1501 ggagcgagcg cgtcggtgga gctcaaggag aaggtcaccg attcgctcag cgcgccgaac
     1561 accatcggga tcgtggaggg gagcgatccg gcgcttcgcg acgagtacct ggtgttctcc
     1621 gcccacatgg accacgtggg aatcaccccg ggcccccgcg acagcatcaa caacggggcg
     1681 gacgataatg cctcgggcac cgcgggggtg atcgagctgg cggaggcgtt cagtcgtccc
     1741 ggcgcccggc ccaggcggtc gatcgtcttc ctgaccgtga gcggcgagga gaagggactc
     1801 tggggaagcc gctggttcag cgagcacccg acggtgccgc tggagcagat ggtcgcgaac
     1861 atcaacctcg acatgctggg ccgcaactgg gccgacacca tcgtggcgat cggcaaggag
     1921 cactcggacc tgggcgccac gctcgaacgg gtgaatgccg cccaccccga gctccgcatg
     1981 gccgccatca acgaccgctg gcccgaggag cggttctact tccgctcgga ccactacaac
     2041 ttcgcccgca agggcgtgcc cgcgatcttc ttcttcaacg gcgtgcacga ggactaccac
     2101 cgggtcaccg attccccgga gaagatcaac agcgagaagg agtcgaggat cctgcggctg
     2161 ctgtactact tcgggcggga gatcggcgac gccccggcgc ggccgaagtg ggacgaggag
     2221 agccggaggc tgatcgtcga agagtgaggc gtgatggaga cccgggctcg ctagcccccc
     2281 ggcgtctcgc tccgctgccc caccgtcagc acgaccccga ggaggatgag cgccgccccg
     2341 atcgcctgga ggggtcgggg gcgttcgccg aggagcaggg cggccgcgat gaccgcgatg
     2401 agcggcgtca ggcacatgta gatcaccgtc cggctcggcc ccaccacttt cacgctccgg
     2461 ttccagatca ggtacgccac cagcagcgag agcagcgtcg agtaggcgag cgccgaccag
     2521 ccctcccagc ccaccgcgcg ccagtccatc gccagcatcg ccggcagtcc ggccagcagc
     2581 agcaccggag cgcccgcgac ggtggtgacc atggtgacgc ggaggggtga gacctggggc
     2641 ggaagcccgc gcaggcccag cgtgtagccc gcccagcaga agaccgccgc gagggtcagc
     2701 agatcgccgg ccatggtcgc cgggccgaac ccggtacccc gcgccgcgac caccagcacc
     2761 acccccagac tcgccaccag caccccgccg accaccttcg gccggaaggg ctccagccgg
     2821 agcgccaccg ccatcacggc cacgatggtc ggcatcgaag ccaggatgag ggcgctgttc
     2881 gacgccgtgg tgcgctccag cccggaaatc caggcgagct ggtagagcgt gttccccacc
     2941 acgccgagca cgacgagccg cggcagcgct cccttgggca gcgtcccggc gccctcgagc
     3001 cggcgcacca gcggcaccag caggaggctc gcgagaccga agcgcacgcc ggtgaaggcg
     3061 agcgacggga aggtggcgaa ggcgcccttg gtgacgctga agttgacacc ccagatgagg
     3121 gcgacgagca gcatgcccag gttggcggcg agcggagggc gggccgccgg ggcggcagga
     3181 cgggtcgcgg gcacgccgaa cagtaaccgc cggcacaagg cccaccgcac ggctgccccg
     3241 ccttgtcgcg gtgccgctat cttcccccca tgtcccagtc ccgcattcgc aacttctgca
     3301 tcgtcgccca catcgaccac ggcaagtcca ctctggccga ccgcctgatc gaggcgaccg
     3361 gcgcggtgga gaagcgtcag atgcgggagc agctcctgga cacgatggac ctggagcggg
     3421 agcgcgggat caccatcaag ctcaacgcgg tgcggatgag ctacaccgcg cgggacggca
     3481 ccgagtacga gctgaacctg atcgacaccc cgggtcacgt ggacttcacc tacgaggtct
     3541 cccgctcgct cgccgcctgc gagggggcga tcctggtggt ggacgcctcc cagggtgtgc
     3601 aggcccagac cctgagcaat ctcttcctgg cgatggacgc cggcctggag atcatcccgg
     3661 tcctcaacaa gatcgacctg ccgggcgcgg agcccgagcg acgcgcccag gagatcatgg
     3721 acctgatcgg cgcgaagcgg gaggagatcc tcgcggtctc cgccaaggag gggaccggcg
     3781 tcccccagct gctggaggcc gtcgtcgccc gggtgccgcc gccgaagggc cgcgaggagg
     3841 cgccgctccg ggccctgatc ttcgactcct attacgaccg ctaccgcggc gcgatcccca
     3901 gcatccgggt ggtggacggc gtggtgcgcg atgggatgga gatcaccttc tgggctcacc
     3961 cggacgatgt ctaccacgtg gacgaggtgg gctatctcca gctgggccag cggccggcga
     4021 cgcagctcga ggcaggcgag gtcggctacc tggtggccag cctgcgcgac gtgcgcgacg
     4081 cccgggtcgg cgacacgatc ctcgatgccc acgaccgcgc ggccgagctg cttcccggct
     4141 accgcgacgt gaaatccatg gtgttcgccg gcctctatcc caccgactcc gaccagtacg
     4201 agggcctgcg cgacgcgctg gagaagctcc ggctcaacga cgccagcctc cactacgagc
     4261 ccgagtcctc caccgcgctg ggcttcggct tccgctgcgg cttcctcggc ctgctccaca
     4321 tggagatcgt gcaggagcgg ctggagcggg agttcaacct cgatctgatc agcacggtgc
     4381 cgacggtgga ataccacgtc tacaccgccg acggcgcgat gatgctgctg gagaatccca
     4441 gcaacctgcc cgaccccgcc tcgatcgacc ggatcgacga gccctacgtc aaggcccgca
     4501 tcatggcgcc ggccgagtac atcggcggga tcatgaagct gggccaggag cgccggggcg
     4561 tgtaccacgg gatgcattac atcgacaccg cccgggtcga gttccacttc gactttccgc
     4621 tgggcgagat cgtgctcgac ttctacgaca agctgaagtc gctgagccgc gggtacgcct
     4681 cgctcgacta cgagatggcg ggctaccggg agtcggacct ggtgaagctg gacatgctca
     4741 tcaacggcga tcccatcgac gcgttcagcg tcatcatcca ccgcgacaag gcccaggagt
     4801 acggccgcaa ggtggcggag aagctgaagg agctgatccc gcggcagctc taccaggtgg
     4861 cgatccaggc ggccatcggg aacaagatca tcgcccgcga gaccatctcc gcgttccgca
     4921 aggacgtgct ggcgaagtgc tacggcggcg acatcacccg gaagcgcaag ctcctcgaga
     4981 agcagaagga ggggaagaag cgcatgaagc agatcggggc ggtggagatc ccgcaggagg
     5041 ccttcctggc cgtgcttcag gtggaatgac ggagggacgg ggggacggag ggacgggggg
     5101 accgtccgtc ctcgtcatcc agaccgcctt cctcggcgat gtcgtcctca cgacgcccct
     5161 tctcaccgca ctggccgggc gccacgggcc ggtggacgtg gtgacgacac cgggcgcggc
     5221 cccgctgctg gaggggcacc ccgccgtccg ggcggtgatc cgctacgaca agaagggccg
     5281 cgacgccggg ctcggcgggc tccgccgagt gggcgcgggg ctcagggagc ggcgctacgc
     5341 ccgcgcctac ctgccccacc gctcctggcg ctccgcggtg ttggcgctgc tggcgcgggt
     5401 gccggagcgg acgggcttcg cggacagtgc ggccgcgatt acttatacca cgcgcgtgcc
     5461 tcgtccccgc accggacacg aggtggagcg actcctcgca ctggcggggc ggcgcgccgg
     5521 cgcgacaccg ccggtctcgc tcgccctggg cccggaagac gaggcggcgg cggagcggtg
     5581 gctcgccgag cagggcgtgc cggcgggctt caccgcgatg gcgcccggcg cgatctgggg
     5641 cacaaagcgc tggccgtact atcccgagct cgccgcctcg gtcgaggggc ccatcgtggt
     5701 ggtcggcgga cccgaggacg cggagctggg ccgaggcatt gtcgcggccg cgccgggccg
     5761 ggcctggaat gcggcgggcc gcctgagcct gcgtggatcg gcggttctgc tccggcgcgc
     5821 ccgggcgctg gtcaccaacg actcggcgcc gctccacctg gcctccgccg tcggcacgcc
     5881 ggtggtcgcg ctcttcgggc ccacggcacc cgagcagggg ttcgggccca ggagctcacg
     5941 cagtctcgcg ctcggccacg cggggctcag gtgccggccc tgctccgcgc acgggccgca
     6001 ggtctgtccc ctgggtcatc atcggtgcat gcgggagctc ccggcggaga cggtggcgga
     6061 ggcgctcgcc atggtcgcgg aagcggagga tcggggtgcg attcgttctc ggcattgaca
     6121 tcggcgggac caacctggtc gtggggtgcg tggccgagga cgggagcacc ctgcacgccc
     6181 tcgccactgc gcctacccac gcggaggcgg gggcgagcga tgtcgtggac cggctcgtgg
     6241 cgctggcgca gggatgcatc gcccaggccc gccgcgagct ccccgggatc gagatcgcgg
     6301 gcgtcggggt gggcgcgccc gggccgctgg acaccaggag cggcgtggtg ctgctcaccc
     6361 ccaacctcgg gtgggtgaac atgccgctgc gccagatcat ccatgaccgg gtcgctctgc
     6421 cggccgagct ggacaacgac gccaactgcg cggtgctggg cgagtggtgg gtgggcgccg
     6481 cccgcggcac tcgccacgcc atcgggatca ccatcggcac cggcatcggc ggagggctga
     6541 tcctggacgg acggctctac cacggcgcgt cggacgtcgc gggggagatc gggcacacca
     6601 ccatcgacac cgagggtcgc cgctgcaagt gcggcaacta cggctgcctc gaggcctacg
     6661 cctcgggacc caacatcgcg ctccgcgcga tcgaggccat ggaggccggc gccgagaccc
     6721 ggctgccgac ctacgtcggc ggcgatacct cgaagatcac cgcccagacc gtctaccagg
     6781 cggcccacga cggcgacgag ctggcgctgg aggtggtgaa cgacaccgcc aagttcctcg
     6841 gggtcggcgt cgccaacctg ctcaacatct tcaatccgga ggtggtcgtc atctgcgggg
     6901 gcgtgaccct cgcgggggat cacctcttcg ttcctctgcg ccgggagacg gcacgccgcg
     6961 cgttcaagcc cg
//
LOCUS       DASUYN010000677         4383 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1979108, whole genome shotgun sequence.
ACCESSION   DASUYN010000677 DASUYN010000000
VERSION     DASUYN010000677.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4383)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4383)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4383
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1979108"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..847)
                     /locus_tag="VF061_13195"
     CDS             complement(<1..847)
                     /locus_tag="VF061_13195"
                     /inference="COORDINATES: protein motif:HMM:NF015684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HEX6670514.1"
                     /translation="MKALSTLDRYVLGSWIRIFVLTALGFPIVSILINLTDTLNRLLD
                     RGLTMREIVGSYVYSIPENMFLVMPAAVLFATVFTVGAMGRHSELTAAKAGGQSFHRL
                     MLPVFVAALGASGLAFVVGELAPGATAKQLELQKAKAARPTRARYNFVYRGDLGWVYT
                     IRSLDVANRQLKQIMFEREGSGLEFPGMVVTADSASWDDSSRAWRVRHGASRVIAGPG
                     KQAMFSFNTMRLRALTQSPADLLAEAKAPDEMRYAELGRYIEGLRRSGNDANKLMVER
                     ALKVAI"
     gene            complement(844..2403)
                     /locus_tag="VF061_13200"
     CDS             complement(844..2403)
                     /locus_tag="VF061_13200"
                     /inference="COORDINATES: protein motif:HMM:NF015684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HEX6670515.1"
                     /translation="MRLLSSYLLRQLAAPFLFALTALTSLMLLSQIAKKFGSLVGKGL
                     PATVIAEVFALSVPFIVAMTLPMAVLLAVLYAFSHLAADNEITAMRASGISVYQILVP
                     VFAWGVLMTGFNFVFVDQVLPRSNARLRNLLIDIGRKKPTFELQEQVINEVPPSQYFL
                     RANRIDAATGRLREVTIYDMGGDASRRIIYADSGLMAYAEGQTDLSLRLYDGNIHQYR
                     PVDPTGFQLTYFRVNDIRVKNVFDELQRNTGESVRGDREMSTCEMLEVIREADREEVE
                     ALQDRRELLRDDLRALLALPPLPDTATGPEPEPLPAYCGWMQRVQELVLPRTAEAQAP
                     AQGRSAAQARTPSQARPRPGPTPPQRLQGPALSNWSLTATALDRAQDASRRAARYAVE
                     VHKKWAISTACMSFVIIGIVLALRFPRGGIGLVIGGGLLVFSVHYIGLTAGESLADRG
                     HVAPWAAMWTPNIVLTVLGILGLLRVSRESGSTRGGDFQEVLDALRHLWRRVRQRRPA
                     VSRLGLRKESA"
     gene            2502..>4383
                     /locus_tag="VF061_13205"
     CDS             2502..>4383
                     /locus_tag="VF061_13205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670516.1"
                     /translation="MTRILVALGCLLLLPRVVAAQSDTTGPGLRLGFDYPTLQLQQPA
                     VLRAPWMGAPRSTPSLRRAAFDSTLTDALAEERAERAVGLRLATLYGAPFQPVDSLRE
                     EELAVQRRNPLGLPTKYADLTLDGQARLEIRTDRVREERCSPALSVDPASGCRGSFRA
                     PSLDNQVNIRSSGVLGRRVHVNVDFDTEREYTSNNEVQIYYEGLQDEIVRRVDVGTVT
                     FQPPPSRFITAAVPANNFGVNAIFDFGPIQLQTLAATQKGSVMAERTYTIGQTTSQAQ
                     ERQARDLDFESGRFFWVVDPDSVPGTPAVDILELDPAVVPATYRPTEVRLYRYRAARG
                     NSGINPNLGGITASARRGDGLDPLAPVRWELLIQGTDYYLDASGLWLVLATKLDQNDY
                     LATSFRTAAGTTIGTFPEVDQGPGSSDVLELISEPQQTQDRRTFRHEMRNVYRVAGAD
                     LDAGSLEVGITLNRSEKPVSGQAQTYLEQLGLAVPSDATLFDRENRLWPRARDPEAVG
                     VVGDRFIVFPHLQPFADPARLSSAEISDSLYRTPVYLLLTEGPTAKFTLRLRYNASGG
                     GDRSGLNLNALQIREGSEQLYVGGRKLVRDVDYRISYDVGQVTFIDPELLFGQGTSQV
                     TAR"
BASE COUNT          687 a         1552 c         1472 g          672 t
ORIGIN      
        1 ggatcgccac cttcaacgcc cgctccacca tcagcttgtt ggcgtcgttc ccggagcgcc
       61 gcagcccctc gatgtagcgg cccagctcgg cgtagcgcat ctcgtccggc gccttggcct
      121 ccgccagcag gtctgccggc gactgggtca gtgcccgaag ccgcatggtg ttgaagctga
      181 acatggcctg cttgccgggg ccggcgatca cccggctggc cccgtgccgg acccgccagg
      241 cgcgggacga gtcgtcccag ctggcgctgt ccgcggtgac caccatgccg gggaactcca
      301 gccccgagcc ctcccgctcg aacatgatct gcttgagctg gcggttcgcc acgtccagcg
      361 agcggatggt gtatacccac ccgaggtcgc cgcggtagac gaagttgtag cgcgcccggg
      421 tgggccgcgc cgccttggcc ttctgcagct ccagctgctt cgcggtggcg cccggggcga
      481 gctcgccgac gacgaacgcc agcccggagg ccccgagggc ggccacgaac acgggcagca
      541 tcagccggtg gaagctctgg cccccggcct tggcggcggt gagctccgag tgtcgcccca
      601 tcgcacccac ggtgaacacg gtggcgaaca gcaccgccgc cggcatcacc aggaacatgt
      661 tctccgggat cgagtacacg tagctcccga cgatctcgcg catggtgagc ccgcgatcga
      721 gcagccggtt gagcgtgtcg gtgaggttga tcaggatcga gacgatggga aagccgagcg
      781 cggtcagcac gaagatcctg atccagctcc ccagcacgta ccggtcgagg gtgctgagcg
      841 ccttcatgcc gattccttcc tcagaccgag ccggctcacc gccggccggc gctggcggac
      901 ccggcgccag aggtgccgga gggcatccag gacctcctgg aagtcgccgc cgcgggtgga
      961 tccggactcc cggctgaccc gcagcaggcc gaggatcccg aggacggtca ggacgatgtt
     1021 gggggtccac atggcggccc agggagccac gtgcccccgg tcggccaggc tctcgccggc
     1081 ggtcagcccg atgtaatgga cggagaacac cagcagcccc ccgccgatca ccaggccgat
     1141 cccgccgcgg gggaaccgca gcgccagcac gatcccgatg atcacgaacg acatgcaggc
     1201 ggtgctgatg gcccacttct tatggacctc gaccgcgtag cgggcggccc gtcggctggc
     1261 gtcctgagcc cggtccagcg cggtcgcggt cagcgaccag ttggaaaggg ccggtccctg
     1321 gagtctctga ggtggggtcg gcccaggcct cggcctcgcc tggctcgggg tcctggcctg
     1381 ggcggccgac cgaccctgtg cgggagcctg cgcttccgcc gtcctcggta gaaccagctc
     1441 ctgtacgcgc tgcatccagc cgcagtacgc cgggagcggc tcgggctcgg gcccggtggc
     1501 ggtgtcgggc aggggaggga gcgccagcag ggcccgcagg tcatcacgga ggagctctcg
     1561 ccggtcctgc agggcctcga cctcctcccg gtcggcttcg cggatcacct cgagcatctc
     1621 gcaggtgctc atctcccggt cgcctcgcac ggactcgccc gtgttccgct ggagctcgtc
     1681 gaagacgttc ttcacccgga tgtcgttgac ccggaagtag gtcagctgga accccgtggg
     1741 gtccaccgga cggtactggt gaatgttgcc gtcgtagagc cggaggctga ggtcggtctg
     1801 cccctccgca taggccatga gcccgctgtc ggcgtagatg atccgccggc tcgcgtcgcc
     1861 gcccatgtcg tagatggtga cctcgcggag ccgacccgtg gcggcgtcga tccggttggc
     1921 ccggaggaag tactgggacg gaggcacctc gttgatgacc tgctcctgga gctcgaacgt
     1981 aggtttcttc cggccgatgt cgatcagcag attccggagc cgcgcgttgc tccggggcag
     2041 cacctggtcc acgaagacga aattgaaccc cgtcatcagg acgccccagg cgaacaccgg
     2101 caccaggatc tgatagacgc tgatcccgct ggcccgcatg gcggtgatct cgttgtcggc
     2161 ggcgagatgg ctgaaggcat agagcaccgc cagcagcacg gccatcggga gggtcatggc
     2221 cacgatgaag ggcacgctga gcgcgaagac ctccgcgatg accgtcgcgg gcagaccctt
     2281 tcccaccagc gacccgaact tcttcgcgat ctggctcagc aacatgaggc tggtgagcgc
     2341 ggtgagcgcg aagaggaagg gggccgccag ctggcggagg aggtacgagc tgagcaggcg
     2401 cacgtcagct aacttaatta cttgtaaggg gttgttgaag gcgtcccgaa cactatattc
     2461 cgggcatcca gcgctcccaa gccccgcatc gactccatag agtgacacga attctggtcg
     2521 ccctgggctg tctcctcctg ctgccccggg tcgtcgccgc tcagtcggat actacggggc
     2581 ccgggcttcg cctgggcttc gactacccga cgctccagct gcaacagccc gccgtgctcc
     2641 gggctccctg gatgggggcg ccgcggagca cgccgtcgct gcgccgggcc gccttcgaca
     2701 gcaccctgac cgacgccctg gccgaggagc gcgcggagcg cgccgtcggt ctccggctcg
     2761 cgaccctgta cggcgcgccg ttccagccgg tggactccct gcgggaagag gagctggcgg
     2821 ttcagcggcg gaacccgctc ggtctcccca cgaagtatgc ggacctgacg ctggacggcc
     2881 aagcgcggct ggagatccgg accgaccggg tgcgcgagga gcggtgcagc cccgccctct
     2941 cggtggatcc cgcctccggc tgccgcggct ccttccgcgc cccgagcctc gacaatcagg
     3001 tcaacatccg ctccagcggc gtgttgggtc ggcgggtcca cgtcaacgtg gacttcgaca
     3061 ccgagcggga gtacaccagc aacaacgaag tccagatcta ttacgagggg ctgcaggacg
     3121 agatcgtccg ccgggtggac gtcggtaccg tcacctttca gcctccgcct tcccgcttca
     3181 tcaccgccgc ggttccggcc aacaacttcg gcgtcaacgc catcttcgac ttcggaccga
     3241 tccagctcca gacgctcgcc gccacccaga aggggagcgt catggccgag cggacctaca
     3301 ccatcggcca gaccaccagc caggcccagg agcggcaggc gcgcgacctc gatttcgaga
     3361 gcggacgctt cttctgggtg gtggaccccg acagcgtccc cggcacgccg gcggtggaca
     3421 tcctggagct cgaccccgcg gtggtgccgg ccacctatcg tccgacggaa gtgcggctct
     3481 accgctaccg cgccgcccga ggcaatagcg gcatcaaccc gaatctcggc ggcatcaccg
     3541 cctcggcgcg gcggggcgac gggctcgatc cgctggcgcc ggtgcgctgg gagctcctca
     3601 tccaggggac cgattattac ctggacgctt ccgggctgtg gctcgtgctg gccaccaagc
     3661 tggaccagaa cgactacctc gccaccagct tccggaccgc cgccggcacc acgattggta
     3721 cctttcccga ggtcgatcaa ggccccggct ccagcgacgt cctggagctc atctccgagc
     3781 cccagcagac gcaggaccgg aggaccttcc ggcacgagat gcggaacgtg taccgcgtcg
     3841 cgggcgccga cctcgacgcc ggctccctgg aggtgggcat caccctcaac cgctcggaga
     3901 agccggtctc cggtcaggcc cagacctacc tcgagcagct tggcctcgcg gtccccagcg
     3961 atgcgacact gttcgaccgc gagaaccgcc tctggccccg ggctcgcgac ccggaagcgg
     4021 tgggcgtggt gggcgaccgg ttcatcgtgt tcccccatct ccagcccttc gccgacccgg
     4081 cccggctgtc gtcggcggag atttccgact ccctctaccg gacgccggtc tacctgctcc
     4141 tgacggaagg gccgaccgcg aagttcacgc tgcggctccg atacaacgcc tccggcgggg
     4201 gcgaccgctc gggcctcaac ctgaacgcgc tccagatccg ggagggcagc gagcagctct
     4261 acgtcggcgg gcggaagctg gtgcgcgatg tggactaccg gatctcctac gacgtcggtc
     4321 aggtgacgtt catcgacccc gagctgctgt tcggccaggg cacctcccag gtgacggcgc
     4381 gat
//
LOCUS       DASUYN010000678         2582 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1540234, whole genome shotgun sequence.
ACCESSION   DASUYN010000678 DASUYN010000000
VERSION     DASUYN010000678.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2582)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2582)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2582
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1540234"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..407)
                     /locus_tag="VF061_13210"
     CDS             complement(<1..407)
                     /locus_tag="VF061_13210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670517.1"
                     /translation="MIRMLGAGVVAGLLLAAPLEAQSGRSGSFGITPYAGYMKFGNLV
                     DGPLGTSVRGAAGPVYGAEATLGLTRGVALVGNVAYASSDLEVGVPVVGGLSFGKSSA
                     LLYDAALRLSVPLSAGGGPAITPFVQAGAGAMR"
     gene            complement(501..1685)
                     /locus_tag="VF061_13215"
     CDS             complement(501..1685)
                     /locus_tag="VF061_13215"
                     /inference="COORDINATES: protein motif:HMM:NF013691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HEX6670518.1"
                     /translation="MSPRRLRAPPPAPVTDLPALRHRIGERAENRPAVYRMLDAEGRI
                     IYVGKAKRLRTRLLTYFRAVYPDDKAARILYASQDIVWDYTPSEFAAYLRELRQIKRY
                     RPHFNHRGNLTRRAVFIKVSRGPAPRVYAGETVARDDARCYGPFRSLARTGEAVRTLN
                     DLLGLRDCAATMPMIFSGQGDLFGSSRQAACMRYEFGFCTGPCAGFVAQREYRRRLET
                     AVAFLEGRTIQPIDRVVGAMQEASMADRFEVAARWREKFEHLEWLLAATSRARTAVDM
                     LTFVYRDPGTYGDDRVYLIRQGVVRASFPDPTTPIEREAFRAVVAAETVRPDPPPGPL
                     PLESVDEILLLMSWFRAHPDALRRTAPLSDWLPEGSSSPGDKPAVLASGALTASEILT
                     PS"
     gene            complement(1682..2506)
                     /gene="mutM"
                     /locus_tag="VF061_13220"
     CDS             complement(1682..2506)
                     /gene="mutM"
                     /locus_tag="VF061_13220"
                     /EC_number="3.2.2.23"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: protein motif:HMM:TIGR00577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0008534 - oxidized purine nucleobase
                     lesion DNA N-glycosylase activity [Evidence IEA];
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-formamidopyrimidine
                     glycosylase/DNA-(apurinic or apyrimidinic site) lyase"
                     /protein_id="HEX6670519.1"
                     /translation="MPELPEVETIVRDIRPALLGRRLDRVSLSHDDVLRGVTRRRLLR
                     GLEGATVRDVFRRAKHAVLDLGPRRLVVQPGMTGSLVVHPRPLEGDARRYAVLRARLD
                     DGRELVYRDVRRLGTLLLLDERAWERYDRAIGPEPLDHDFTPERLGQALGRSRQAVKK
                     VIMDQKHLAGVGNIYANEALYAARIDPSKAARKLTADDHRRLHAEIRRILLAAIESNG
                     TTVRDYRTGTGEAGSFQLELLVYGREGEPCGRCGTRLTGTHTIDARITVFCHRCQS"
BASE COUNT          380 a          893 c          945 g          364 t
ORIGIN      
        1 tgccgcatcg cgccggcgcc ggcctggacg aagggggtga tcgccgggcc cccgcccgcc
       61 gacagcggca cgctcagccg gagcgccgca tcgtacagca gcgcagagct cttcccgaac
      121 gaaagcccgc cgacgaccgg caccccgacc tcgaggtcgg agctggcgta cgccacgttg
      181 ccgaccaggg ccacgccccg ggtcaggccg agggtggcct cggcgccgta gaccggtccc
      241 gccgcgcctc ggacactggt gccgagcggc ccgtccacca ggttgccgaa cttcatgtac
      301 cctgcgtagg gagtgatacc gaacgatcct gaccggccgc tctgggcttc cagcggcgcg
      361 gcgagcagaa ggccggcgac gacgccggcg ccaagcatgc gaatcatggt tgcctccttg
      421 agcggtctcg gggccggcgt cagacgtcgc cggcggtcca gcaggaggca ggcacggctg
      481 gtgccacaat ctgcagcgct ctaactcggt gtcagaattt cgcttgcggt caaagccccg
      541 gacgccagca ccgcgggctt gtcccctggg gaggacgatc cttcgggtag ccagtccgaa
      601 agcggcgcgg ttcggcgcag ggcatcggga tgggcgcgga accacgacat gagcagcaga
      661 atctcatcca cggactcgag cgggagcggg ccgggcggcg ggtcggggcg gacggtctcc
      721 gccgccacga ccgcgcgaaa ggcctcccgc tcgatcggtg tggtaggatc ggggaatgag
      781 gcgcggacta ccccctgccg gatcaggtag acccggtcgt cgccgtaggt gccgggatcg
      841 cgatagacga acgtcagcat gtccacggcg gtgcgcgcgc ggctggtggc ggccagcagc
      901 cactcgaggt gctcgaactt ctcgcgccac cgggcggcca cctcgaaccg gtccgccatc
      961 gatgcctcct gcatggcgcc cactacccgg tcgatcggct ggatggtgcg cccttccagg
     1021 aacgcgaccg cggtctccag cctgcggcgg tattcccgct gggccacgaa tcccgcgcac
     1081 ggcccggtgc agaacccgaa ctcgtaccgc atgcatgcgg cctggcggga ggagccgaac
     1141 aggtcgccct ggccgctgaa gatcatcggc atcgtcgcgg cacagtcacg gagaccgagc
     1201 aggtcgttga gggtgcgcac cgcctcgccg gtgcgggcca gcgaccggaa ggggccgtag
     1261 caccgtgcgt cgtcccgggc gaccgtttcc cccgcgtaca cccgcggggc cggtccgcgc
     1321 gacactttga tgaacaccgc ccgccgggtc aggttgccgc gatggttgaa gtgggggcgg
     1381 tagcgcttga tctgccgcag ttctctgaga taggcggcga actcgctcgg cgtgtaatcc
     1441 cagacgatgt cctgcgatgc gtagagaatc cgcgccgcct tgtcatcggg gtataccgcg
     1501 cggaagtagg tgagcagccg ggtgcggagc cgcttcgcct tcccgacgta gatgatccgt
     1561 ccctcggcgt cgagcatccg gtagaccgcc gggcggttct cggcgcgctc gccgatgcgg
     1621 tggcggagtg ccgggaggtc ggtgacgggc gccggggggg gcgcccggag gcggcgcggg
     1681 ctcacgattg gcagcggtgg cagaacaccg tgatgcgcgc gtcgatggtg tgggtgccgg
     1741 tgagcctggt gccgcatcgg ccgcagggct cgccctcgcg cccgtacacc agcagctcga
     1801 gctgaaagct gcccgcctcg ccggtgccgg tgcggtagtc gcgcaccgtg gtaccgttgg
     1861 actcgatcgc cgccaggaga atgcgccgga tctccgcgtg cagccggcgg tggtcgtccg
     1921 cggtgagctt gcgcgcggcc ttggagggat cgatcctcgc ggcgtagagc gcctcgttcg
     1981 cgtagatgtt cccgacaccg gccaggtgct tctggtccat gatcactttc ttcaccgcct
     2041 ggcgggagcg cccgagcgcc tgtcccagcc gctcgggcgt gaagtcgtgg tcaagcggct
     2101 cggggccgat cgcccggtcg tagcgctccc aggcgcgctc gtcgagcagc agcagcgtgc
     2161 ccagacggcg cacgtcccgg tagaccagct cccggccgtc gtcgagccgg gcccggagca
     2221 ccgcgtaccg ccgcgcgtcg ccctcgagcg gacgcggatg caccacgagc gagcccgtca
     2281 tccccggctg caccaccagg cgccgtggcc cgagatcgag caccgcgtgc ttggcgcgcc
     2341 ggaacacgtc gcgcacggtc gcgccctcga gcccgcgcag gaggcggcgc cgggtgacgc
     2401 cgcgcagcac gtcgtcgtga ctcagggaga cccggtcgag gcggcggccg agcagggcgg
     2461 gacggatgtc gcggacgatg gtttcgactt cgggaagctc gggcattaca cccgaaaact
     2521 aggcggtggg gcggtcggga accacggtca atcagcgcgc tccgatccgc tcgctccggc
     2581 cg
//
LOCUS       DASUYN010000679        11297 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_874725, whole genome shotgun sequence.
ACCESSION   DASUYN010000679 DASUYN010000000
VERSION     DASUYN010000679.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 11297)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11297)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11297
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_874725"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            62..520
                     /gene="rimI"
                     /locus_tag="VF061_13225"
     CDS             62..520
                     /gene="rimI"
                     /locus_tag="VF061_13225"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: protein motif:HMM:TIGR01575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008999 -
                     peptide-alanine-alpha-N-acetyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HEX6670520.1"
                     /translation="MDAPFRIRPATPADAAALVAIERRCFSDPWSEAAFLEALSSDWT
                     FGLVAESRRAVGGYLIGREAGGSGEILNLAVAPESRRRGVGGELLDEGLAAFRRLRAS
                     EVFLEVRESNHSARSLYVARGFRPVGQRAAYYRNPREDALVLRLALHQHA"
     gene            624..1106
                     /locus_tag="VF061_13230"
     CDS             624..1106
                     /locus_tag="VF061_13230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HEX6670521.1"
                     /translation="MSRSLNKVTLIGNLGADPEVRSTSNGSRVATLSLATSRRWKNQA
                     GEQQEKTEWHRVILWNNKGATLADLAERYMKKGDKLYVEGSIEYRSWQDREGQTRYTT
                     EITAREVILLSGRGEGSESFTPANKVAAAASAAAPKGKEQSFEDFPEALDSEDDDLPF
                     "
     gene            1332..2600
                     /locus_tag="VF061_13235"
     CDS             1332..2600
                     /locus_tag="VF061_13235"
                     /inference="COORDINATES: protein motif:HMM:NF013630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEX6670522.1"
                     /translation="MALLLLGFALNRQEVRPFREIPMQRTFRWSWLGAVALAAGPTLA
                     AAQDTSTQSHTVREGDTLWDLARQYRGDPFLWPDIFRLNTSVVEDPHWIYPGEVLRLS
                     ATEAVASVPAQDTPPPSASDSAATDSAATAPVADQLAESPVAGTEADPSAPASLASLT
                     QADSNAQESEPLFGPRPGQTMQETLRAYTEQPYRALRRSEFHSSGFLTEGQKLPFGKV
                     HGTTAPPQIQATPSNNNALPYASVSVSAPKGATYQVGDSLLAVVVGREVRGYGHVVQP
                     SGILQVMDTASGKYLASVVAVYGPIRGGQSVLPLEQFGEPGGARAVPVADGVRAKLLG
                     GTGRQDLKAPQMVVFLDKGRQAGVAPGDLFEIRRRPERLDDGNIRVDEVMATLQVVHV
                     RERSATARLLNVISPDIPSGTQARQVAKLP"
     gene            2828..3778
                     /locus_tag="VF061_13240"
     CDS             2828..3778
                     /locus_tag="VF061_13240"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEX6670523.1"
                     /translation="MSGRVLVTGGAGFIGSHIAEAYLSAGWEVVALDDLSRGHQRNVP
                     SGARFVRADIRSPEARALLAEGGFTVLNHHAAQIDVRVSVDEPAFDASINVVGLVNLL
                     EGAGVGGVKRVVFASSGGVVYGDPEVVPTPETAPKGPISPYGVSKLSGEYYLRALAAL
                     RGFEAVAMRYANVFGPRQDPKSEAGVVSIFVSRLLENRPLTVFGNGLQTRDYVFVRDV
                     ARANVLASTASVPAGTTIDDTAFNIATGRQTNVLELAEMVGKVMGQKPVVEMAAARPG
                     ELFRSSLDITKAGRVLGWKPEFGFDDGLPQLVEWFRKEGR"
     gene            3775..4488
                     /locus_tag="VF061_13245"
     CDS             3775..4488
                     /locus_tag="VF061_13245"
                     /inference="COORDINATES: protein motif:HMM:NF013760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HEX6670524.1"
                     /translation="MILQAGGAIPRTPIELVLTASLETKIVLIITVIFSLVSWFIIIL
                     KWWQFRRLNRQADRFFAEMERTTRLQDAYHAVMKQPPSPYNRLFREAITFYSELRPGS
                     LREERGADRSSLSMTQLEALKMVLGKEVAAERDLLGHYIPWLATIGSVSPLLGLLGTT
                     IGIINAFTGIATKGSGNLAAVAPGVAEALVATFAGLAAAIPAVIAYNLYVNRVRLFAG
                     ELEGFANELIGTMAREGLV"
     gene            4489..4920
                     /locus_tag="VF061_13250"
     CDS             4489..4920
                     /locus_tag="VF061_13250"
                     /inference="COORDINATES: protein motif:HMM:NF014525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ExbD/TolR family protein"
                     /protein_id="HEX6670525.1"
                     /translation="MASSLGGGLGSQRGEMNLNADVNVTSLVDVMLVLLIVFMITAPM
                     MQGGVDVELPRAEARPLSPKEGMVVSVNRDGRIFVDQTAVSYRDFRVTFKSLVATRKP
                     SGVYLQADTRVPYGEVVRVLAVIRGAGVQNVGLVAQEEESS"
     gene            4917..5615
                     /locus_tag="VF061_13255"
     CDS             4917..5615
                     /locus_tag="VF061_13255"
                     /inference="COORDINATES: protein motif:HMM:NF024503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB C-terminal domain-containing protein"
                     /protein_id="HEX6670526.1"
                     /translation="MNVRAPDRKDPRSQLAGGVGTLVVHAAAALFLFSQVRTTTATPP
                     VYAVNLVAAPAPTERRRIAREAIPTPPQEKPAPVKPSPKPPPKAPPKPEPKPPAPTPA
                     DREAPAPTAAPVTPAEGETPSTGTDVVTIKTPGLEFPFPEYLRNIVNQVYTNWDRDDA
                     RGNRFAEISFLIRRDGSVHDIRFVTHSGSFAFDLSAQGAIEAAGNAFAFGPLPDGWDA
                     DVLPVSFYFKPADQ"
     gene            5612..6922
                     /locus_tag="VF061_13260"
     CDS             5612..6922
                     /locus_tag="VF061_13260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670527.1"
                     /translation="MRPLPVILLAVLAAAPAAAQDTTTIDQPIRIGVDYAVNRPGLVV
                     LPGAGLDSVRAIVRRDLDYTDRFEMLGDFASTGSETAGDAAGSVSYGIYKTMGAQLGV
                     ELTAAPGGVLARLHDINGQKVRNTQTFALPAETDPEYRLEVHRVADEIARWASGTAGL
                     AATRFLFVSNGRVYRIDSDGEQAVPLTPEGVTALSPVWSPDGRTVAYTRLEAGRGGVI
                     VQSLAGGGSQVAPGAQSGLNITPAFAPDGRTLAFARSDESGTDIFTSNVADRCCAQRL
                     TVGRYADNLSPTFSPDGRRIAFVSTRSGPPQIYVMAANGTDQELLAPFDYGATGASNA
                     PEWSPDGARVVFHRDVSRSPQIFLVDVAGRRVTQLTSSGRNEDPTWGPDGRHIAFISD
                     RTGRRQIWIIDTETGRVRQLQTPGAARLPSWSRRLGRATVASNP"
     gene            6936..7505
                     /gene="pal"
                     /locus_tag="VF061_13265"
     CDS             6936..7505
                     /gene="pal"
                     /locus_tag="VF061_13265"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-associated lipoprotein Pal"
                     /protein_id="HEX6670528.1"
                     /translation="MRASSLMLLASFALAACGGGNPPEEPAPEPAPAPAPPPAPAPVD
                     DSAERERLERERMEREAAERARALAAELGTMINFEFDRADIRSADQGTLDRKAAILAA
                     NSNVRLRIAGHADDRGSDEYNLALGNRRAAAAKRYLESKGIDGTRIEVVSYGEERPLN
                     PGSDEAAYAQNRRDEFEVTAGGDNLVAPQ"
     gene            7502..8302
                     /locus_tag="VF061_13270"
     CDS             7502..8302
                     /locus_tag="VF061_13270"
                     /inference="COORDINATES: protein motif:HMM:NF024915.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX6670529.1"
                     /translation="MRSRLGLLAGVLAPALVAGAGLGGCVSKGDVQMVQGEVALLKAE
                     MARRDSARAAQLDEVIRMQRQVMDSLTATRRSVAQIRGDLSTDLYNIQQQLVQLQELT
                     GQSQQRLTELRTRLEARGAQIDAAPAAPGDSARPMPEGGTASADQMYEASLAQLRRGS
                     LSTARLGLREMLRQYPTSERAPDALYFIGQSYAAENPDSAAAYYRQVVDRHGSSPRAA
                     SALYNLGLLAERRKDNAGARDAYQRVAEKYPQSDEAALARDRLKALGR"
     gene            8325..>11297
                     /gene="tatC"
                     /locus_tag="VF061_13275"
     CDS             8325..>11297
                     /gene="tatC"
                     /locus_tag="VF061_13275"
                     /inference="COORDINATES: protein motif:HMM:NF040057.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HEX6670530.1"
                     /translation="MTGSAGEMPFLDHLEELRLRILRSLAAVVVGFGIGLWAVERFQL
                     VSVLKAPIAKYLSDGKLIVTSPTEPLMIVFKLGFVVGLVLASPIILWQLWAFLAPALY
                     EREKKALVPSLFIGLLLFLTGATLAYLFVVPQALRVLFSFQSEAIAPFITYDAWFGFV
                     LQVVLALGISFELPLVMVILSWLGVIGPGELHRFRRYAVVCAFIAGAILSPGADLLSM
                     LMMTVPLLFLYEVGVAGSAIVHRRRKAAAMAALVLLGLGLGAAPAPAQEPVRPGRTAA
                     DTLRAGAVDTGEFEGEGEFGRDADTRPGQSLDSATARRLGLPTAPSRSFAQPDSVVNA
                     LLNRQGYRPTRYRADSATVFVEDQEVRLQGQALTERQGALLEADSITYRRNSCLLAAS
                     GDPHLFDQGQVLVGEGISYDVCRRRGMIQDALTNFSEGSTVWFLRGNVAQDSSSSRIY
                     AGASNITSCDLPSPHYHFSSRQMKWVSRSVLVARPVTLYVRDVPILWLPFIFQDMRPG
                     RHSGILIPQFGINDLVRPTRGYNRQVTNVGYYWAPNDYLDFTGRLDWFANRYVQYGVT
                     GQYRWLDRFVAGTMGFNEQRQVGGGSGLALRWDHRQQFDLSTSLNLDFNYASNTRVVR
                     DNAIDPLQNTQQITSSLNFSKRYGWGTLTLGGNRRQDITDGGVQQLLPAVTVSPAPLA
                     LGSDITWSPGLSFTNNTTSSPDRDSLFQILPGGAIDTIALDASTRVTALNFDTPLRFG
                     SFNWQNSIQATDETSTGRETVTFRIDDPTSDDPADSIEVRRSFPGDFQSTVDWNTGIN
                     LPILFRGSWKLQPSLGISNTTGGPFMLRNRNTDGDWVRQGKRFRVGVSSTPTLFGFYP
                     GIGPLQRIRHSISPVISYTYEPAADVPEEYARAIAQPGQAVQLRSLARQALTVGLSQT
                     FEGKRRPEGPDTTSANAPKLRLLSISTSAITYDFEQAKQPGRTGWATQALTNSFLSDL
                     LPGFSLSLSHDLWRGTAGS"
BASE COUNT         1687 a         4055 c         3912 g         1643 t
ORIGIN      
        1 gcggcgtggg agccggtcta cggccggccg gccgaagcac aggcgagatg ggagattgcg
       61 catggacgcc cccttccgga tccggccggc gacgcccgct gacgccgcgg cgctggtcgc
      121 gatcgagcgt cgctgcttca gcgatccgtg gagcgaggcg gcgttcctcg aggcgctctc
      181 gtcggactgg accttcgggc tggtggccga gagccggcga gcggtgggcg gctaccttat
      241 cggccgcgag gccgggggga gcggtgagat cctgaacctg gcggtcgccc ccgagagccg
      301 gcggcgaggc gtcggcggcg agctgctgga cgaggggctg gccgcgttcc ggcgcctccg
      361 cgccagcgag gtatttctcg aggtgcggga gtcgaaccat tccgcgcggt ccctctatgt
      421 ggcgcggggc ttccgaccgg tcgggcagcg ggccgcatac taccggaatc cgcgcgagga
      481 cgcgctggtg ctccggctcg cgcttcacca gcacgcgtga gcagggcacc ggtggcgttg
      541 ctctggttgg caggaagtcg gccgaaccgc atctttaccc gggtccgcag agagggccca
      601 tcgtcagcat cctggaggtg catgtgagcc ggagtctgaa caaagtcact ctgatcggga
      661 acctgggagc ggaccccgaa gtccgcagca cctcgaacgg gtcgcgggtc gccacgctct
      721 cgctcgccac cagtcggcgg tggaaaaacc aggcaggcga gcagcaggag aagaccgagt
      781 ggcaccgcgt catcctgtgg aacaacaagg gcgccaccct cgccgatctc gccgagcggt
      841 acatgaagaa gggcgacaag ctctacgtcg aggggagcat cgagtaccgc tcctggcagg
      901 accgcgaggg gcagacccgg tacaccaccg agatcacggc gcgggaagtc atcctgctca
      961 gcggccgggg cgaggggtcg gagtcgttca cgcccgccaa caaggtggcc gccgccgcgt
     1021 ccgctgccgc gcccaagggc aaggagcagt cgttcgagga cttcccggaa gcgctcgact
     1081 ccgaggacga cgacctgccc ttctgatcgg gcccgttctc cccgagggct ggtgggccac
     1141 ccccggggac tggggcggcc aggggcgtgg cgctccctgg ccggcttccg ccgcggccat
     1201 ggggtcttgc caacgcctct cgcgccccgc gatgagccgg gccgaatcga ggccttggca
     1261 cggccctgcc ccagctacct aaagtcatgt gtaacaggtg gttgcctgcc ttggctccag
     1321 gtgtgtcacc cttggcgttg cttttgctcg ggttcgccct gaaccgtcag gaagtccgtc
     1381 ccttccggga gatcccgatg cagcgcacgt tccgttggtc ttggctcggc gcagtggcgc
     1441 tggccgccgg ccccaccctg gccgccgccc aggacacctc cacgcagagc cacaccgtcc
     1501 gcgagggcga cacgctctgg gacctggccc gccagtaccg cggcgacccg ttcctctggc
     1561 ccgacatctt ccggctgaac accagcgtgg tcgaggaccc tcactggatc tacccgggcg
     1621 aagtgctccg gctctcggcc acggaggcgg tcgcgtcggt gccggcccag gacaccccgc
     1681 cgccctccgc gagcgacagc gcggcgaccg acagcgccgc gaccgcgccg gtcgccgacc
     1741 agctcgccga gtcgcccgtg gcgggcaccg aggcggaccc cagtgccccg gccagcctcg
     1801 cctcgctgac ccaggccgac tccaacgccc aggagtccga gcccctgttc ggtccccggc
     1861 cgggccagac gatgcaggag acgctccgcg cctataccga gcagccgtac cgcgcgctcc
     1921 ggcgcagcga gttccactcc tccgggttcc tgaccgaggg ccagaagctg cccttcggga
     1981 aagtgcacgg caccacggcg cctccgcaga tccaggccac gccgtccaac aacaacgcgc
     2041 tgccctacgc cagcgtctcg gtctcggcgc cgaagggcgc cacctaccaa gtgggcgaca
     2101 gcctgctggc cgtcgtggtc gggcgtgagg ttcgtggcta cggccatgtg gtccagccca
     2161 gcggcatcct ccaggtgatg gacaccgcca gcgggaagta cctggcgagc gtggtggcgg
     2221 tctacggccc gattcgcggc ggacagagcg tgctcccgct ggagcagttc ggcgagcccg
     2281 gcggcgcccg cgcggtgccg gtggccgacg gcgtacgcgc caagctgctg ggcggcaccg
     2341 gccggcagga tctcaaggcg ccccagatgg tggtgttcct cgacaagggc cgccaggccg
     2401 gcgtcgctcc cggcgacctg ttcgagatcc gccgccggcc cgagcggctg gacgacggca
     2461 acatcagggt ggacgaggtg atggcgaccc tccaggtggt ccacgtccgc gagcggtctg
     2521 ccaccgcacg gctcctcaac gtgatctcgc ccgacatccc gtcgggcacc caggcaaggc
     2581 aggtggcgaa gctgccgtaa caccgggcgc cacttgacgt gcggcggggc ggaggcgtcg
     2641 gcggcctccg ccccgctgcg cgttcggggc agccgtctgc ttccttgtca cctcatcgtg
     2701 gtccggcgcg ctgcgaatgc tccccttcac cctaccgtcc gatggccaca cctccctaca
     2761 ttgcgggctg ttccgcagtc ccccccgagc gcacagcgac tggagagccc atgacgagac
     2821 gtagcgaatg agcggccgag ttctggtcac cggcggggca gggttcatcg gctcgcacat
     2881 cgccgaggcc tacctctccg ccggctggga agtggtcgcg ctcgacgacc tctcccgcgg
     2941 ccaccagcgc aacgtcccgt ccggtgcccg cttcgttcgc gccgacatcc gctcgccgga
     3001 agccagggcg ctgctcgcgg agggcggctt cacggtgctc aatcaccacg cggcccagat
     3061 cgatgtccgg gtgtcggtgg acgagccggc cttcgacgcc tccatcaacg tggtcggctt
     3121 ggtgaacctg ctcgaggggg cgggggtcgg cggcgtgaag cgggtcgtct tcgccagcag
     3181 cggcggcgtg gtctacggcg atcccgaggt cgtgccgacg ccggagaccg cgcccaaggg
     3241 gccgatctcg ccctatgggg tgagcaagct ctccggtgag tactacctca gggcgctggc
     3301 ggcgctccgc gggttcgagg ccgtggccat gcggtacgcc aacgtgttcg gaccccggca
     3361 ggacccgaaa tccgaggccg gggtggtctc gatcttcgtc tcccggctgc tggagaaccg
     3421 gccgctcacg gtgttcggca acgggctcca gacccgcgac tacgtcttcg tccgcgacgt
     3481 cgcgcgggcc aacgtgctgg ccagcaccgc gtcggtgccg gcgggcacca ccatcgacga
     3541 caccgccttc aacatcgcca ccggcaggca gaccaacgtg ctggagctgg ccgagatggt
     3601 ggggaaggtg atggggcaga agccggtggt cgagatggcg gccgcccgcc ccggggagct
     3661 gttccgcagc tcgctcgaca tcacgaaggc cggcagggtc ctcggctgga agcccgagtt
     3721 cggcttcgac gacggcctgc cccaactggt ggagtggttc cggaaggagg ggcggtgatc
     3781 ctgcaagccg ggggcgcgat ccctcgaact ccgatcgagc tggtgctcac cgccagcctc
     3841 gagacgaaga tcgtcctcat catcacggtg atcttctccc tggtctcctg gttcatcatc
     3901 atcctcaagt ggtggcagtt ccggcggctc aaccggcagg cggaccgctt cttcgcggag
     3961 atggagcgca ccacccgact ccaggacgcc taccacgccg tcatgaagca gcccccctcg
     4021 ccctacaacc ggctgttccg cgaggcgatc accttctact ccgagttgcg gcccggctcc
     4081 ttgcgcgagg agcggggcgc cgatcggagc tcgctctcca tgactcagct cgaggccctg
     4141 aagatggtgc tggggaagga agtcgccgcc gagcgggacc tgctcgggca ctacatcccg
     4201 tggctggcca ccatcggctc ggtcagcccg ctgctcggcc tgctcggcac gaccatcggg
     4261 atcatcaacg cgttcacggg catcgccacc aagggatccg gcaacctcgc ggcggtcgcg
     4321 ccgggcgtgg cggaggcact ggtggccacc ttcgcgggcc tcgcggccgc gatcccggcg
     4381 gtgatcgcct acaacctcta cgtcaaccgg gtgcgactct tcgccggcga gctcgagggc
     4441 ttcgccaacg aactgatcgg caccatggca cgggaaggac tggtctagat ggcgtcgagc
     4501 ctcggcgggg gactggggag ccagcgtggc gagatgaacc tcaacgccga cgtcaacgtc
     4561 acctccctgg tggacgtgat gctggtgctc ctcatcgtgt tcatgatcac ggcaccgatg
     4621 atgcagggcg gggtggacgt ggagcttccg cgggccgaag cccggccgtt gtcgcccaag
     4681 gaaggcatgg tggtgtccgt caatcgggac ggccgcatct tcgtggatca gaccgccgtg
     4741 tcgtaccgcg acttcagggt caccttcaaa tcgctggtgg cgacccggaa gccgagcggg
     4801 gtgtacctcc aggcggacac ccgggtgccg tacggtgagg tcgtgcgggt gctcgcggtg
     4861 atccggggcg ccggagtgca gaacgtcggg ctcgtggcgc aggaggaaga gtcgtcgtga
     4921 acgtacgggc gccggatcgc aaggatccgc gcagccagct ggccggcggg gtcggcactc
     4981 tggtggtgca cgcggctgcg gcgctgttcc tgttcagcca ggtgcgcacc acgacggcca
     5041 cgccgccggt ctatgcggtg aatctggtgg cggcgccggc cccgaccgag cgccggcgga
     5101 tcgcgcggga ggcgattccc acgccgccgc aggagaagcc ggcgccggtc aagcccagcc
     5161 ccaagccgcc gcccaaggcg ccgcccaagc cggagccgaa gccgcccgcg cccacgccgg
     5221 cggaccgcga ggcgccggcg cccacggccg caccggtgac gccggccgaa ggggagacgc
     5281 cgagcaccgg gaccgacgtg gtgaccatca agacgccggg actcgagttt ccctttcccg
     5341 agtacctgcg gaacatcgtg aaccaggtct acaccaactg ggatcgcgac gacgcccggg
     5401 gcaaccggtt cgccgagatc agcttcctga tccggcggga cggctcggtg cacgacatcc
     5461 ggttcgtcac ccattcggga agcttcgcct tcgacctcag cgcccagggc gcgatcgagg
     5521 ccgcgggcaa cgccttcgcg ttcgggccgc tgcccgacgg ctgggatgcc gacgtgctcc
     5581 cggtgagctt ctacttcaag cccgcggatc aatgagacca ctgcccgtca tactgctggc
     5641 cgtgctcgcc gccgccccgg cggccgcgca ggacacgacc acgatcgatc aacccatccg
     5701 catcggcgtc gactacgccg tgaaccggcc gggactggtg gtcctgcccg gggccggcct
     5761 cgactcggtg cgcgccatcg tccggcggga cctcgattac accgaccggt tcgagatgct
     5821 cggcgacttc gcgtccacgg gttcggagac tgccggggat gcggctggct cggtcagcta
     5881 cgggatctac aagaccatgg gcgcccagct cggggtcgag ctcaccgcgg cacccggcgg
     5941 cgtcctggcg cggctgcacg acatcaacgg gcagaaggtg cggaacaccc agaccttcgc
     6001 gctgccggcc gagaccgacc cggagtaccg gctggaggtc caccgggtcg ccgacgagat
     6061 cgcgcggtgg gcgagcggca cggcggggct cgcggcgacc cgcttcctct tcgtcagcaa
     6121 cggccgggta taccggatcg acagtgatgg ggaacaggcg gtgccgctga cgccggaggg
     6181 cgtcaccgcg ctctcgccgg tgtggtcgcc cgacggtcgg acggtcgcct acacccggct
     6241 cgaggccggg cgcggcggcg tgatcgtgca atcactcgcc ggcggcggct cgcaggtggc
     6301 gccgggcgcg cagagcgggc tgaacatcac gcccgcgttc gcacccgacg ggcgcacgct
     6361 cgcgttcgcg cgctccgacg agagcggcac cgacatcttc acgtcgaacg tggccgatcg
     6421 ctgctgcgcg caacgcttga ccgtgggacg ctatgctgac aacttgtcac caaccttttc
     6481 cccagacggc cgacgcatcg cgttcgtgtc cacgcgctcg ggcccgcccc agatctacgt
     6541 gatggccgcg aacggcaccg atcaggagct gctcgcgccc ttcgactacg gtgcgaccgg
     6601 cgcgtcgaac gcgccggagt ggtcgcccga cggggcgaga gtcgtcttcc accgcgacgt
     6661 ctcccggagc ccgcagatct tcctggtgga tgtcgcggga cgtcgcgtca cccagctcac
     6721 ctcgtcgggc cgcaacgagg acccgacgtg ggggcccgac ggccgtcaca tcgccttcat
     6781 ctccgaccgc accgggcggc ggcagatctg gatcatcgac accgaaaccg gccgggtacg
     6841 gcagctccag acgccaggag cggcccggct tccttcgtgg tcccggcgcc tcggtcgggc
     6901 cacggtcgcc tcgaacccat gaactcggag tgatgatgcg cgcctcttcc ctgatgctcc
     6961 tggcttcctt cgcgctggcc gcctgcggcg gcgggaatcc gcccgaggag ccggcccccg
     7021 agcccgctcc ggccccggcc ccgccgccgg cccccgcgcc cgtcgacgac agcgccgagc
     7081 gcgagcggct ggagcgcgag cggatggagc gcgaggcggc cgagcgcgcc cgggcgctgg
     7141 ccgccgagct gggcacgatg atcaacttcg agttcgatcg ggcggacatc cgctcggccg
     7201 atcagggaac gctggaccgc aaggccgcca tcctcgccgc caactcgaac gtgcggctcc
     7261 gcatcgcggg ccacgcggac gatcgcggat ccgacgagta caacctcgcc ctgggcaacc
     7321 gccgcgccgc cgcggcgaag cgctacctgg agagcaaggg catcgacggc acccggatcg
     7381 aggtggtgtc gtacggcgaa gagcggccgc tcaaccccgg cagcgacgag gccgcctacg
     7441 cccagaaccg ccgcgacgag ttcgaggtca cggccggcgg cgacaacctc gtcgcaccgc
     7501 agtgagatcg cgactcggtc tcctggcggg cgtgctcgcc cccgcgctgg tcgcgggggc
     7561 ggggctcggc ggctgcgtct ccaagggcga cgtgcagatg gtgcagggcg aggtcgcgct
     7621 gctgaaggcg gagatggcgc gccgcgactc ggcccgcgcg gcgcagctcg acgaggtcat
     7681 ccggatgcag cggcaggtga tggactcgct caccgccacc cgccgctcgg tcgcccagat
     7741 ccggggcgac ctctcgaccg acctctacaa catccaacag cagctggtgc agctccagga
     7801 gctcaccggg cagagccagc agcggctcac cgagctgcgc acccggctgg aggcacgggg
     7861 ggcccagatc gatgcggcgc ccgccgcgcc gggcgacagc gctcgcccca tgcccgaggg
     7921 cggcaccgct tcggcggacc agatgtacga ggcctcgctg gcccagctcc ggcgcggcag
     7981 cctctccacc gcccggctcg gcctccggga gatgctgcgg cagtatccca ccagcgagcg
     8041 ggcgccggac gcgctctact tcatcggcca gagctatgcg gcggagaacc ccgattccgc
     8101 ggccgcctac taccggcagg tggtggaccg ccacggcagc tcacccaggg cggcgtcggc
     8161 gctctacaac ctcggcctcc tggccgagcg gcgaaaggac aacgcgggcg cgcgggacgc
     8221 ctaccagcgg gtggcggaga agtacccgca gtccgacgag gccgctctgg cccgcgaccg
     8281 actgaaggcg ctcgggcgct gagcccgggc gccagcccac ctccatgacc ggctccgcgg
     8341 gggagatgcc gttcctcgat cacctcgagg agctgcgcct gcggattctg cggtcgctgg
     8401 cggccgtggt ggtggggttc ggcatcgggc tgtgggcggt ggagcggttc cagctggtca
     8461 gtgtcctcaa ggcccccatc gcgaagtacc tctccgacgg caagctgatc gtcaccagcc
     8521 cgaccgagcc gctgatgatc gtgttcaagc tcgggttcgt ggtcgggttg gtgctcgcct
     8581 cgccgatcat cctctggcag ctctgggcct tcctcgcgcc ggcgctgtac gagcgcgaga
     8641 agaaggccct ggtcccctcg ctcttcatcg gcctgctcct gttcctcacc ggcgcgaccc
     8701 tggcgtacct cttcgtggtg ccccaggccc tccgggtgct gttcagcttc cagagcgagg
     8761 ccatcgcccc cttcatcacc tacgacgcgt ggttcgggtt cgtgctccag gtggtgctgg
     8821 cactcggcat ctccttcgag ctgcccctgg tgatggtgat cctctcgtgg ctgggcgtga
     8881 tcgggccggg cgagctgcac cggttccggc gctacgcggt ggtctgcgcc ttcatcgccg
     8941 gggcgatcct gtcgccgggg gccgacctgc tctcgatgct catgatgacg gtgccgctgc
     9001 tcttcctgta cgaggtgggc gtggcgggct cggccatcgt gcaccggcgt cggaaggcgg
     9061 cggccatggc cgcgctggtg ctgctggggc tgggactggg cgcggccccg gcgccggctc
     9121 aggagccggt ccggccggga cggaccgccg ccgataccct gcgcgcgggc gcggtggata
     9181 ccggggagtt cgagggtgag ggcgagttcg gccgggatgc ggacacccgg ccgggccagt
     9241 cgctcgacag cgccaccgcc cgccggctcg gcctgcccac ggcgccgtcc cgcagcttcg
     9301 cccagcccga ctcggtggtg aacgcgctgc tgaaccggca gggctatcgc cccacccgct
     9361 atcgcgccga ctccgcgacc gtgttcgtcg aggaccagga ggtgcggctg cagggccagg
     9421 ccctcaccga gcgtcagggc gcgctgctcg aggccgactc catcacctac cggcggaaca
     9481 gctgcctcct cgcggcgtcg ggcgacccgc acctcttcga tcagggtcag gtcctggtgg
     9541 gcgaaggcat cagctacgat gtctgccggc ggcgggggat gatccaggac gccctcacca
     9601 acttcagcga aggctccacc gtctggttcc tgcgcggcaa cgtggcgcag gactccagct
     9661 cgagccggat ctacgcgggc gccagcaaca tcaccagttg cgacctgccc tcgccgcact
     9721 accacttctc gtcccggcag atgaagtggg tgtcccgctc cgtgctggtg gcccggccgg
     9781 tgacgctcta cgtccgcgac gtccccattc tctggctccc gttcatcttt caggacatgc
     9841 ggccgggtcg ccactcgggg atcctgattc cccagttcgg catcaacgac ctcgtgcgcc
     9901 cgacgcgagg gtacaaccgg caggtgacca acgtcggcta ctactgggcg cccaacgact
     9961 acctcgactt caccggacgg ctcgactggt tcgccaaccg atacgtccag tacggcgtca
    10021 cggggcagta tcgctggctc gaccggttcg tggcggggac gatgggcttc aacgagcagc
    10081 gccaggtggg cggaggctcg gggctggcgc tccgctggga ccatcggcag cagttcgatc
    10141 tctcgaccag cctgaacctg gacttcaatt acgccagcaa cacacgggtg gtgcgggaca
    10201 acgcgatcga cccgctgcag aacacccagc agatcaccag ctccctcaac ttctccaagc
    10261 gatacggctg ggggacgctg accctgggcg gcaaccggcg ccaggacatc accgacgggg
    10321 gcgtgcagca gctgctgccg gcggtgacgg tgtccccggc gcccctggcc ctcggatcgg
    10381 acatcacctg gtcgccgggg ctcagcttca ccaacaacac gacctcgagc cccgaccggg
    10441 actcgctctt ccagatcctc cccggcggcg cgatcgacac catcgccctg gatgccagca
    10501 cccgggtgac ggccctcaac ttcgacacgc cgctccggtt cggctcgttc aactggcaga
    10561 actcgatcca ggccaccgac gagaccagca ccggccggga gacggtgacg ttccggatcg
    10621 acgacccgac cagcgacgat ccggccgact cgatcgaagt gcgccgcagc tttcccgggg
    10681 actttcagag cacggtggac tggaacacag gcatcaacct gccgatcctc ttccgcggct
    10741 cctggaagct gcagccctcg ctcggcatct ccaacacgac cggcgggccg ttcatgctgc
    10801 gcaaccggaa caccgacggc gactgggtcc ggcaggggaa gcgtttccgt gtcggcgtga
    10861 gctccacccc gacgctcttc ggcttctacc ccggcatcgg accgctgcaa cggatccggc
    10921 acagcatctc cccggtgatc tcctacacct acgagccggc ggcggacgtt cccgaggagt
    10981 acgcccgggc catcgcgcag cccggacagg ccgttcagct ccggagcctg gcccgccagg
    11041 cgctcacggt cggactctcg cagacgttcg agggcaagcg tcgccctgaa ggcccggaca
    11101 ccacttcggc gaacgccccc aagctccggc tgctcagcat cagcaccagc gcgatcacgt
    11161 acgacttcga gcaggcgaag cagccgggac ggaccggatg ggccacccag gcgctgacca
    11221 actcgttcct gagcgacctg ctgccggggt tcagcctgag cctgagccac gacctgtggc
    11281 gggggacggc ggggtcc
//
LOCUS       DASUYN010000680         2689 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_438557, whole genome shotgun sequence.
ACCESSION   DASUYN010000680 DASUYN010000000
VERSION     DASUYN010000680.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2689
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_438557"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..797
                     /locus_tag="VF061_13280"
     CDS             <1..797
                     /locus_tag="VF061_13280"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX6670531.1"
                     /translation="DAALYARSGGVIEAILADLGSRVEAGGLLARLESADQSIALAQA
                     RERHANARLQAERNRALKTAGVVTQADSERVELEFREAELVLQKAQRDYDLTRIVAPF
                     SGVVTSRTARVGRLVSAGDSLFRLTALAPVLAAVRVPEAAAFGIRIGAEATVEGPRGE
                     RARARVVRASPVIDPASGTREVVLQLGAGDRLPPGSGVTVRLGTVTRRVVTVPREAVD
                     SGGFMVVWDTARPVLRQVTVGADLPGDRVEVVEGLSAGERVVRTGR"
     gene            794..>2689
                     /locus_tag="VF061_13285"
     CDS             794..>2689
                     /locus_tag="VF061_13285"
                     /inference="COORDINATES: protein motif:HMM:NF024829.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HEX6670532.1"
                     /translation="MSERPRLRPDLVLVEQTYRGEQSYIVKDPTTRKYFRFRPVEIAV
                     MHALDGERTTAEAAAALAVEGLKVSAAAIGKFADKLKAMGLVERTLRERSVLLVERLR
                     AQRRQRLRQSPFQGDIFRLRWSMGDPDHFMDRTIPYLRFCFTRGFVLASLVLFAAYAV
                     VLAAKWPEFTAALGDLYHFRVSGTDLLVLWLTGTSVIVVHELGHGYTCKHFGGQVHEI
                     GAMLLYFEPAFFCNVNDAWTFPELKARLWVTAAGSWIQMVLAGIAAIVWWAATPDTLI
                     SQVALSAVLIGGFTTVVVNLNPLIPLDGYYALSDWLEVPNLRQRAFGHLGWLARRHIF
                     RRELPMPPADEREQRIFVVYGLLATAYIGSIFLLIGGLVHGWLSTALGVAGVAIFAGL
                     VIAMAQRPVRAWGREAVQAWRRWRAGRAEQPRRLRPVHGLVAAAVIVVAGALVPRPIT
                     VTGPLTLSPGSRVALVSPDTGVVFEVAAREGVRVPAGAVLARIRSLDLEHDRRSAGFA
                     ADSLALRETQARARGDEGEVARHAALRGGATARAAGLGRRVESLTLRAPASGTVLTPR
                     PELLAGRWVSIGDTVLELGDPGVLEARIALQGAGASLARAGQPVRLLLHAGEGVRLAG
                     TLSSVSEA"
BASE COUNT          306 a          948 c         1039 g          396 t
ORIGIN      
        1 acgacgccgc gctctacgcg cgctccggcg gcgtgatcga ggcgatcctc gccgacctcg
       61 gcagccgggt cgaagccggg gggctgctgg cgcggctgga gagcgccgac cagtccatcg
      121 cccttgccca ggcccgggag cgccatgcca acgcccggct ccaggccgag cgcaatcggg
      181 cgctcaagac cgcgggcgtc gtcacccagg ccgactccga gcgggtggag ctggagttcc
      241 gcgaggccga gctggtgctc cagaaagcgc agcgcgacta cgatctcacc cgcatcgtcg
      301 cgcccttcag cggggtggtg accagccgga cggcccgggt ggggcggctg gtgtctgcgg
      361 gcgactcgct cttccggctc accgcgctcg cgccggtgct cgccgcggtg cgggtgccgg
      421 aggcggcggc gttcgggatc cggatcggcg ccgaggccac ggtggaggga ccacgggggg
      481 agcgggctcg ggccagggtc gtccgggcga gcccggtcat cgacccggcc agcggcaccc
      541 gcgaggtggt gctgcaactc ggcgccggtg accgactgcc gccgggcagc ggcgtcaccg
      601 tccggctcgg caccgtgact cggcgggtgg tgaccgtgcc ccgcgaggcg gtggactccg
      661 gcggcttcat ggtcgtgtgg gacaccgcgc gcccggtgct ccggcaggtg accgtcggcg
      721 ccgacctgcc gggcgaccgg gtcgaggtgg tggagggcct ttccgccggc gagcgggtgg
      781 tgcggaccgg ccgatgagcg agcgcccccg gctgcggccg gacctggtac tggtggagca
      841 gacctaccgg ggggagcaga gttacatcgt gaaggacccg accacccgga agtacttccg
      901 cttccggccg gtcgagatcg cggtgatgca cgcgctggac ggcgagcgca ccaccgccga
      961 ggcggcggcg gcgctggcgg tcgaggggct caaggtgagc gcggccgcca tcggcaagtt
     1021 cgccgacaag ctcaaggcca tggggctggt cgagcggacc ctgcgcgagc gctcggtcct
     1081 gctggtggag cggctccggg cccagcgccg gcagcggctg cggcagagcc cgttccaggg
     1141 cgacatcttc cggctccgct ggtcgatggg cgatcccgac catttcatgg atcgcaccat
     1201 cccgtacctc cggttctgct tcacccgcgg gttcgtcctc gcctcgctgg tgctcttcgc
     1261 cgcctacgcc gtcgtcctcg ccgccaagtg gcccgagttc accgccgccc tcggcgacct
     1321 ctaccacttc cgcgtctccg gcaccgacct gctggtgctc tggctcaccg gtacctccgt
     1381 catcgtggtg cacgagctgg gacacggcta cacctgcaag catttcggcg gccaggtcca
     1441 cgagatcggc gcgatgctgc tctacttcga gccggccttt ttctgcaacg tgaacgacgc
     1501 ctggaccttt cccgagctca aggcccggct gtgggtcacg gcggcgggat cctggatcca
     1561 gatggtgctc gccggcatcg ccgcgatcgt ctggtgggcc gccactccgg acacgctcat
     1621 ctctcaggtg gcgctctcgg cagtgctgat cggcggcttc accacggtgg tcgtgaacct
     1681 caatccgctg attccgctcg acggctacta cgcgctgagc gactggctcg aggtgcccaa
     1741 cctcaggcag cgagccttcg ggcatctcgg ctggctggcc cgccgccaca tcttccgcag
     1801 ggagctgccg atgccgcccg cggacgagcg ggagcagcgg atcttcgtgg tctacggcct
     1861 gctcgcgacc gcatacatcg gctcgatctt cctgctgatc gggggcctgg ttcacggctg
     1921 gctctcgacc gcgttgggcg tggcgggggt ggcgatcttc gcggggctgg tgatcgcgat
     1981 ggcgcagcgg ccggtgcggg cgtggggccg cgaggcggtg caggcctggc gccggtggcg
     2041 ggcggggcgg gcggagcaac cccggcggct gcgaccggtc cacggcctgg tggcggccgc
     2101 cgtcatcgtc gtggccggcg cgctggtgcc tcggccgatc accgtgaccg gacccctcac
     2161 cctctccccg ggatcgcggg tggcgctggt gtcgcccgac accggggtgg tgttcgaggt
     2221 ggcggcccgc gagggcgtcc gggtgccggc cggagcggtg ctggcccgga tccgcagtct
     2281 cgacctggag cacgaccggc ggagcgccgg cttcgcggcc gattccctcg cgctgcgcga
     2341 gacccaggcg cgggcgcggg gggacgaggg cgaggtggcc cgccacgccg ccctccgggg
     2401 cggcgccacg gcccgggcgg cggggctcgg gcggcgggtc gagagtctca cgctgcgggc
     2461 gccggcgtcc ggcacggtgc tgaccccgcg cccggaactg ctggccggac gctgggtgtc
     2521 gatcggcgat accgtgctcg agctgggcga tcccggtgtg ctggaggccc ggatcgcgct
     2581 ccagggcgcc ggggcctccc tggcccgggc gggccagccg gtgcgcctgc tgctgcacgc
     2641 cggcgaaggg gtgcggctgg ccggcactct ctcgagcgtg tcggaggcg
//
LOCUS       DASUYN010000681         3067 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1759995, whole genome shotgun sequence.
ACCESSION   DASUYN010000681 DASUYN010000000
VERSION     DASUYN010000681.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3067
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1759995"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1660
                     /locus_tag="VF061_13290"
     CDS             <1..1660
                     /locus_tag="VF061_13290"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M1 family aminopeptidase"
                     /protein_id="HEX6670533.1"
                     /translation="VRIRDRWRDVPLSYYVYAEDSALARPLFGMTPDVMETFTRLTGV
                     RYPWTGYAQVTATDFIGGMENVGATTLVDWLPDPRAYHDRPWYRVTLIPHELAHQWFG
                     NLVTAENWANYWLHEGLAQFMPGQYWGVKQGAHAEQDFYLEEYRQYLARDARRRAPLA
                     AYNSSVVYPKGALVMQMLKQHLGPERFWVAINRFLTRHAFGSATTDDLRQAVLDATGE
                     SLPWFWSQWMYQAGHPEFQVAAAYDSTARALTLTVRQTQIDTATPDTGGVRFSTPAVF
                     RAPVAVRVGTSEGDIVAHAVIAAREQTVRIENVPEPPTMVVFDDENAVLKTLTFHQPT
                     PWLANLLHRHPNLWNRSWAIGQLASRTGDTLAGAALAHAAASADYDLTRAEAAAALAR
                     FPADQALPALETATADTSARVRKAAVETLGRLGDARGADAVQRAWADDASDQVRAAAL
                     TAAVRLVPEVSREAIATGLRTKSYREAIQNAAIAAALQRPDSGLVAALESVAGEQPLP
                     AIALATLAARGHESARAALDRLLQDSRGWVRQWAAEAAGHSTSD"
     gene            1885..2343
                     /locus_tag="VF061_13295"
     CDS             1885..2343
                     /locus_tag="VF061_13295"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX6670534.1"
                     /translation="MDHDVESRRHARHLLELHGLEVVQASNGIAALELVQRLPESFRL
                     VITELDLPDLSGNMVAETLRIFRPDLPTLCMSRRAAAGAVNGRRCLTKPIQGPDIQTA
                     LQNGRHFQSSEGGSGVPAASIARARARYAAVGDLVEAALELARATGADED"
     gene            complement(2340..2777)
                     /locus_tag="VF061_13300"
     CDS             complement(2340..2777)
                     /locus_tag="VF061_13300"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX6670535.1"
                     /translation="MDKDPATPDLPLIRTVLVVDDARVVRRLAFRVLSESGYRVFEAA
                     GAVEAIEVLAMLRGHVDLVLVDVVMPEVNGVDLVRLIREEWDWPAILFMSAHPAEVLA
                     REGLKDLRVHFLAKPFTRDELLGAIERALAAHANRGAPRQQEI"
     gene            2925..2997
                     /locus_tag="VF061_13305"
     tRNA            2925..2997
                     /locus_tag="VF061_13305"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2958..2960,aa:Lys,seq:ttt)
BASE COUNT          468 a         1099 c         1074 g          426 t
ORIGIN      
        1 ggtgcggatc cgggaccggt ggcgcgacgt cccgctctcc tactatgtct acgccgaaga
       61 cagcgccctc gcccggccgc tgttcgggat gacgccggac gtgatggaga cgttcacccg
      121 cctcaccggc gttcgctatc cctggaccgg gtacgcccag gtcacggcga ccgacttcat
      181 cggcgggatg gagaacgtcg gcgccaccac gctggtggac tggctccccg acccgcgcgc
      241 ctaccacgac cgcccgtggt accgggtcac cctcatcccc cacgagctgg cccaccagtg
      301 gttcggcaat ctggtgaccg cggagaactg ggccaactac tggctgcacg agggcctcgc
      361 gcagttcatg ccgggccagt actggggggt gaagcagggg gcgcacgcgg agcaggactt
      421 ctacctcgag gagtaccggc agtacctcgc ccgcgacgcc cgccgccgcg cgccgctcgc
      481 cgcctacaac tccagcgtcg tctatcccaa gggcgccctg gtgatgcaga tgctcaagca
      541 gcatctgggg cccgagcggt tctgggtggc gatcaatcgc ttcctcaccc ggcacgcctt
      601 cgggagcgcc accaccgacg acctgcgaca ggcggtgctc gacgccaccg gcgagagcct
      661 gccctggttc tggtcccagt ggatgtacca ggcgggtcat cccgagttcc aggtcgccgc
      721 ggcctatgat tccaccgccc gcgcgctcac gctcacggtc cgccagaccc agatcgacac
      781 cgcgacgccc gacaccggcg gggtgcgctt cagcacgccc gcggtcttcc gtgcgcccgt
      841 ggcggtgcgg gtcggcacgt cggagggcga catcgtggcc cacgcggtga tcgcggcgcg
      901 ggaacagacc gtccggatcg agaacgtgcc cgagccgccc accatggtgg tgttcgacga
      961 cgagaacgcg gtgctgaaga cgctcacctt ccaccagccc acgccgtggc tcgccaatct
     1021 gctccaccgc catcccaatc tgtggaaccg gagctgggcc atcggccagc tcgcctcccg
     1081 cacgggcgac accctcgcgg gcgccgcgct ggcccacgcg gccgcgagcg cggactacga
     1141 tctcacccgg gcggaggcgg cggcggcgct ggcccgattt cccgcggacc aggcgctgcc
     1201 ggcactggaa accgcgaccg ccgacacctc ggcgagagtg cggaaggcgg cggtggagac
     1261 cctcggacgg ctcggggatg cgagaggcgc tgacgcggta cagcgcgcct gggccgacga
     1321 tgccagcgac caggtccggg cggcggcgct cacggccgcg gtccggttgg tgccggaggt
     1381 gtcccgcgag gcgatcgcga ccgggctccg gacgaagtcg taccgggagg cgatccagaa
     1441 tgcggcgatc gccgcggcgc tgcagcgccc ggattccggg ctggtggcgg cgctcgagtc
     1501 ggtcgccggc gagcagccgc tgccggccat cgcgctcgcc acgctcgccg ctcgcgggca
     1561 cgagagcgcc agggccgccc tcgaccgtct gctgcaggac tcgcggggtt gggttcgaca
     1621 gtgggccgcg gaggccgcgg gtcattccac ctccgactga tcggaaccag tcgcgagggg
     1681 ctcatggccc agtctcccgc gtggcgcaca ccgctgccgt gcggaggctc acggagaccc
     1741 ggcccagact cggcagcggc acaacgggtg cgtgaccgct gccgctgaga tgccccgacg
     1801 gccgacgcac attcccgtcg aaagagacgg gaggccacac tgggcgagac acgcgggccg
     1861 gagaatcgcc ggctgatact gctggtggat catgacgtgg agtcgcggcg gcacgccagg
     1921 cacctgctcg agctgcacgg cctggaggtg gtgcaggcct ccaacggcat cgcagcgctg
     1981 gagctggtgc agcgcctgcc ggagagcttc cggctggtga tcaccgagct cgacctgccc
     2041 gacctctccg ggaacatggt agccgagacg ctgcggatct ttcgtcccga tcttcccaca
     2101 ctttgcatgt cgaggcgcgc cgccgccggc gcggtgaacg gccgccgatg cctcaccaag
     2161 ccgatccagg ggcccgatat ccagacggcc ttgcagaacg gccggcactt ccaatcctcg
     2221 gagggcggtt ccggcgttcc cgccgcgagc attgcacggg cccgggcgcg gtacgcggcg
     2281 gtgggggatc tcgtggaggc agcgctggag ctggctcgtg ccacaggcgc agacgaggac
     2341 tagatctcct gttggcgggg agcgccgcga ttggcgtgcg ccgcgagcgc gcgctctatc
     2401 gcacccagga gctcatcacg ggtgaacggc ttggccagga agtgcacccg caggtccttc
     2461 aggccctcgc gcgccaggac ctccgccgga tgggccgaca tgaagaggat ggccggccaa
     2521 tcccactcct cgcggatcag gcggaccaga tccaccccgt tcacctccgg catgaccacg
     2581 tccaccagca ccaggtccac gtggccccga agcatggcga gcacctcgat cgcctccacg
     2641 gcgccggccg cctcgaagac gcggtagccc gactcggaga gcaccctgaa ggcgagccgg
     2701 cgcaccaccc gcgcgtcgtc cacgacgagc accgtacgaa tgagggggag gtcgggcgta
     2761 gctgggtcct tgtccatcgt ggcctggggg atgaggacgg ggcgctgccg attggtagcc
     2821 cctcgaaccg gagggcgtcg gtgacagggg tcacccccgc cggccgtcgt tacagtgccg
     2881 gggcgggcga aaagtttgta ggtttcggcc tctgatcgat ttgcgcgccg gtagctcagc
     2941 tggtagagca gcgggctttt aacccgtagg tcgtgggttc gagtcccacc cggcgcactg
     3001 gttcccctcg tccggaagcg cgagatgccc gcccccacca ccgacttccc gcggaccgca
     3061 gcctggc
//
LOCUS       DASUYN010000682         4639 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_438830, whole genome shotgun sequence.
ACCESSION   DASUYN010000682 DASUYN010000000
VERSION     DASUYN010000682.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4639)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4639)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4639
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_438830"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(197..2863)
                     /gene="alaS"
                     /locus_tag="VF061_13310"
     CDS             complement(197..2863)
                     /gene="alaS"
                     /locus_tag="VF061_13310"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HEX6670536.1"
                     /translation="MKSARIRRLFLDFFVAKGHREVPSSSLVPADDPTLLFTNAGMVQ
                     FKRTFLGQEHREYSRATTCQKCVRAGGKHNDLEQVGHTRRHHTFFEMLGNFSFGDYFK
                     REAIAYAWEFVTGSEWLGIPADRLRVTVHHTDDEARRYWREVSGLPDHRIYGLGDKDN
                     FWQMGDTGPCGPCTEIYVDLEWAASGRAESGDIIPQTEFERLAEEGRFLEIWNLVFMQ
                     FDRSADGTLTPLPKPSVDTGAGLERIAAVMQGEDDNFHTDAFRPLIDRVGELVGTAYD
                     RSAENRASYRVLADHARAVSFLLADGVYPSNEGRGYVLRRILRRAVRHAWLLGRREPT
                     LAPLCDVVVREMGDVYPELAAKGSYLHEVTETEERRFLETIEGGLARLEEIFASGATT
                     ISGEEAFKLYDTYGFPIDLTQIIAGERGVGVELAGFERALDQQRERSRAARAGSGGGK
                     SGTRGAPAIRRGKRDQWRSVKRGKQRFVGYETTESDTDVLAFRQEGPRVELVLKENPF
                     YAESGGQVSDIGAVSGEGWSLTVDSVRKDARGTVVGGEFGAAFEPTPLRAAVDAPRRR
                     DIERNHSATHLVHYVLRKRLGTHVRQQGSLVEPERLRFDFSHHGPIEPAALRAIEDEV
                     NDLVLGNEVVTTREMPYADALALGAMAFFSEKYGDVVRVVRMGPSIELCGGTHVRTTG
                     QVGPFRFSGQTGVAAGVRRIEAVTGTGALRALREQEQRLAQVAETLKAQPEHVLRRLE
                     QLVEERQRLETRLQEALRSGGGAGMTGDRTTVDGVDVTIAETSSDDRAEVGRISDQFR
                     EGKRNGVLVLFSTGGRGGIHVALTDDLVRAGRNAGDLVNRIAALSGGRGGGRPHCASA
                     GAGDASKLPEARAATRDLVSAWLGGRVEGNGA"
     gene            complement(2896..3549)
                     /locus_tag="VF061_13315"
     CDS             complement(2896..3549)
                     /locus_tag="VF061_13315"
                     /inference="COORDINATES: protein motif:HMM:NF014668.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RecX family transcriptional regulator"
                     /protein_id="HEX6670537.1"
                     /translation="MTAPESPSRPRRVTALVPEPHGAGAIRIEVDGERFGSVAPEVVR
                     EERLHLGRELDEALLGRLAEQAEIEAAHRTALRAVERRPFARADLGRRLRRKGHAPQA
                     VDLALARLAERGYLDDAAFAANYVETRAARGRGPLRLAHDLAAMGVERRVVDRALAAH
                     AGRADAAGDVPRALAAKRAAQLGDLPRHVRRRRVLAYLARRGFSGREVSEMVGQLLA"
     gene            complement(3546..4586)
                     /gene="recA"
                     /locus_tag="VF061_13320"
     CDS             complement(3546..4586)
                     /gene="recA"
                     /locus_tag="VF061_13320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008094 - ATP-dependent activity, acting
                     on DNA [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HEX6670538.1"
                     /translation="MPADDTRLEADRRKALGLAISQIEKQLGKGSIMRMGADSARVKV
                     PAIPTGAINLDAATGIGGVPRGRITEIYGPESSGKTTLTLHLAANVQRMGGVAAYVDA
                     EHALDIEYAKKLGVNVEDLLVSQPDTGEQALEIVDILVRSGAVDLVVIDSVAALVPKA
                     EIEGEMGDAIVGVQARLMSQALRKLAGAINRSNTAVVFINQLREKIGVMFGNPETTTG
                     GKALKFYASLRLDIRRIGPVKERETVIGNHVRVKVVKNKVAPPFRQAEFDIMFDEGIS
                     HTSLLVDLASEANIIQKSGAWYSYNDQRIGQGRENAKLFLRDNPPLMTEIEGKVKELL
                     GVRPVTAGAAEE"
BASE COUNT          630 a         1668 c         1639 g          702 t
ORIGIN      
        1 gcatccgcgg cgagcaggtc gagcgccacc gagcggtcgc cctcccgggc gaggacccgc
       61 tccagcgcgc ggcgaccgaa ggcagcgagg gcttcggggt tcggctcgtc gtcggcattg
      121 tcgtcggcat ggactcgcac gcgctcgcgc agggcttccg gcgccccggc cgtctcccgc
      181 tcgagccagg cggagctcag gcgccgtttc cttcgacgcg gccgccgagc caggccgaga
      241 cgagatcgcg ggtggcggcg cgcgcctccg ggagcttgga ggcgtcgccg gcgccggcgg
      301 acgcgcaatg ggggcggccg ccgccccggc caccgctgag cgcggcgatc cggttcacca
      361 ggtcccccgc gttgcggccg gcccgcacca ggtcgtcggt gagggcgacg tggatcccgc
      421 cgcggccgcc ggtgctgaag aggaccagca cgccgttccg cttgccctcg cggaactggt
      481 ccgagatccg ccccacctcc gcccgatcgt cgctgctggt ttcggcgatg gtgacgtcca
      541 cgccgtccac cgtcgtcctg tcgccggtca tgccggcgcc gccgccgctc cgaagcgcct
      601 cctgcaggcg cgtctcgagc cgctgccgct cctcgaccag ctgctccagc cggcgcagca
      661 cgtgctcggg ctgggccttg agcgtctccg cgacctgggc gagacgctgc tcctgctccc
      721 ggagggcgcg aagcgcgccg gtgccggtga ccgcctcgat ccgccgcacg ccggccgcca
      781 ccccggtctg cccgctgaag cggaacggcc cgacctggcc cgtggtgcgg acgtgggtcc
      841 cgccgcacag ctcgatcgac ggtcccatcc gcaccacgcg gaccacgtcg ccgtacttct
      901 ccgagaagaa cgccatcgcg cccagcgcga gcgcgtcggc gtagggcatc tcgcgcgtgg
      961 tcaccacctc gttgccgagc acgaggtcgt tgacctcatc ctcgatggcg cggagcgccg
     1021 ccggctcgat gggcccgtgg tgggagaagt cgaaccgcag acgctccggc tccaccagcg
     1081 agccctgctg ccgtacgtgg gtgcccaggc gcttccggag cacgtaatgc accaggtggg
     1141 tggcgctgtg gttgcgctcg atgtcccggc gccggggcgc gtccaccgcg gcgcggagtg
     1201 gcgtgggctc gaacgcggcg ccgaactcgc cgccgaccac ggtccccctc gcgtccttcc
     1261 ggaccgagtc caccgtgagg gaccatcctt ccccgctcac cgcgccgatg tcgctcacct
     1321 ggccgcccga ctcggcgtag aacgggttct ccttcaggac cagctcgacc cggggcccct
     1381 cctggcggaa ggcgagcacg tcggtgtcgg actcggtggt ctcgtagccg acgaagcgct
     1441 gcttgccgcg cttgaccgat cgccattggt cccgcttgcc gcggcggatc gcgggcgcgc
     1501 ccctggttcc ggacttgccc ccgccggagc cggcccgggc ggcacgggat cgctcccgct
     1561 gctggtccag ggcccgctcg aagcccgcca gctccacgcc caccccccgc tcgcccgcga
     1621 tgatctgggt caggtcgatg gggaatccgt aggtgtcgta gagcttgaac gcctcctcgc
     1681 cggagatggt cgtcgcgccg gaggcgaaga tctcctccag ccgcgccagt ccgccctcga
     1741 tggtctcgag gaagcgccgc tcctcggtct cggtgacctc gtgcagatag ctccccttgg
     1801 ccgcgagctc gggatacacg tcgcccatct cccgcaccac gacgtcgcac agcggcgcca
     1861 gggtcggctc ccgccggccg agcagccagg catgccgcac cgcgcgccgc aggatccggc
     1921 gcagcacgta gccgcggccc tcgttgctgg gatagacgcc gtcggccagc aggaagctca
     1981 ccgcgcgcgc gtgatcggcg agcacccggt aggaggcgcg gttctccgcg ctccggtcgt
     2041 acgctgtccc gaccagctcc ccgacgcggt cgatgagcgg gcggaaggcg tcggtgtgga
     2101 agttgtcgtc ctccccctgc atgaccgcgg cgatgcgctc gagccccgcg cccgtgtcga
     2161 cggacggctt gggcagcggc gtcagagtcc cgtccgccga gcggtcgaac tgcatgaaca
     2221 cgagattcca gatctcgagg aaccgccctt cctccgcgag gcgctcgaac tcggtttgcg
     2281 ggatgatgtc gcccgattcg gctcggccag acgccgccca ttccagatcc acgtagatct
     2341 cggtacacgg cccacacggc cccgtatcac ccatctgcca gaaattgtcc ttgtcgccca
     2401 ggccgtagat ccggtggtcg gggaggccgg agacttcccg ccagtagcgg cgggcctcgt
     2461 cgtcggtgtg gtgcacggtg acgcggagcc ggtcggcggg aatgccgagc cactcggagc
     2521 cggtgacgaa ctcccaggcg taggcgatcg cctcgcgctt gaaatagtcg ccgaacgaga
     2581 agttgcccag catctcgaag aacgtgtggt gccgccgggt gtggcccacc tgctcgaggt
     2641 cgttgtgctt gccgccggcg cgcacgcact tctggcaggt cgtggcgcgg ctgtactccc
     2701 ggtgctcctg gcccaggaag gtgcgcttga actgcaccat gcccgcgttg gtgaacagga
     2761 gggtgggatc gtccgcgggt accaacgacg aagaaggcac ctcgcggtgc cccttggcga
     2821 cgaagaagtc gaggaagaga cgacggatac gagcggactt catggggaga gaatataagg
     2881 gaggggggcc gctcgctagg cgagcagctg acccaccatc tccgacacct cccgaccgct
     2941 gaagccgcgc cgggcgaggt aggcgagcac ccggcgccgg cgcacgtgcc ggggcagatc
     3001 gccgagctgc gccgcgcgct tggcggcgag ggcgcggggg acgtcgcccg cggcgtcggc
     3061 gcgaccggca tgggccgcga gggcacgatc gacgacccgg cgctccacgc ccatggcggc
     3121 gaggtcgtgc gccagccgga gcgggccgcg cccgcgcgcc gccctggtct ccacgtagtt
     3181 ggcggcgaag gccgcgtcgt ccaggtagcc gcgctcggcc aggcgcgcga gtgcgagatc
     3241 gaccgcctgg ggagcgtggc ccttccgccg gagccgccgg ccgagatcgg cgcgggcgaa
     3301 ggggcgacgc tccaccgccc ggagcgccgt gcggtgggca gcctcgatct cggcctgttc
     3361 ggccaggcgg ccgaggaggg cctcgtcgag ctcgcggccc aggtggagac gctcctcccg
     3421 gacgacctcg ggcgcgaccg agccgaaccg ctccccgtcc acctcgatgc gaatcgcccc
     3481 ggcgccgtgc ggctcgggca ccagggcggt gacgcggcgc ggacggctcg ggctctccgg
     3541 cgcggtcact cttcggccgc ccccgcggtg accgggcgga cgccgagcag ctccttcacc
     3601 ttgccctcga tctcggtcat gaggggcggg ttgtcgcgca ggaagagctt ggcgttctcc
     3661 cggccctggc cgatgcgctg atcgttgtac gagtaccagg cgcccgactt ctggatgatg
     3721 ttggcctcgg aggcgaggtc caccagcagc gaggtgtggc tgatgccctc gtcgaacatg
     3781 atgtcgaact ccgcctggcg gaacggcggc gcgaccttgt tcttgaccac cttgacccgg
     3841 acgtgattcc cgatgaccgt ttcgcgctcc ttgaccggcc cgatccgccg gatgtcgagc
     3901 cggagcgagg cgtagaactt gagcgccttg ccgccggtgg tggtctccgg gttgccgaac
     3961 atgacgccga tcttctcccg cagctggttg atgaagacga cggcggtgtt ggagcgattg
     4021 atggcgccgg cgagcttccg cagggcctgg ctcatgagcc tcgcctggac gccgacgatc
     4081 gcatcgccca tctcgccctc gatctccgcc ttgggcacca gcgcggcgac cgagtcgatg
     4141 accacgaggt ccacggcgcc ggagcggacc aggatgtcca cgatctcgag cgcctgctcc
     4201 ccggtatcgg gctgggagac caggagatcc tcgacgttca cgccgagctt cttggcgtac
     4261 tcgatgtcga gggcatgctc cgcgtccaca taggcggcga ccccacccat ccgctggacg
     4321 ttggccgcca ggtgcaaggt gagggtggtc ttgcccgagg actccgggcc gtagatctcg
     4381 gtgatccggc cgcggggcac gcccccgatt ccggtggccg cgtccaggtt gatggcgccg
     4441 gtgggaatgg caggcacctt gacccgggcg gaatcggcgc ccatgcgcat gatggacccc
     4501 ttgccgagct gcttctcgat ctgggagatg gccagtccga gagccttccg gcggtcggcc
     4561 tccagccggg tatcgtcagc gggcatgatg ttcctctgat gggaagtggc ttattttgct
     4621 acacaccatt atactcagg
//
LOCUS       DASUYN010000683         2115 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1541430, whole genome shotgun sequence.
ACCESSION   DASUYN010000683 DASUYN010000000
VERSION     DASUYN010000683.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2115
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1541430"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(147..1076)
                     /locus_tag="VF061_13325"
     CDS             complement(147..1076)
                     /locus_tag="VF061_13325"
                     /inference="COORDINATES: protein motif:HMM:NF021640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0061810 - NAD glycohydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIR domain-containing protein"
                     /protein_id="HEX6670539.1"
                     /translation="MDKPRIFLGSSGKQVKLLQALTRGLQDVAQVEPWTTSLTPGTST
                     LDRLVELAHEVDFAAFVFARDDWTTTSPAASPAPGTGQDSPRDNVVFEAGLFGGVLGM
                     RRTFIIHSRGSKLPTDLLGLICVRYDDGTTPSEMKILNQKLRNAIETEGRVARIEGLW
                     WQFSLTARGPREPSAVSLLRISRDRDGALELTGRSWQEDGSLSARYWSDATKERKEPS
                     GVFYHWQGERPRDPDAPQLDGTGEIRLESADRASGYFTTRAANDPAVNARTAGVFWRA
                     EPGDMSVMDGPDDRQRAELILERLGRWKALTNA"
     gene            complement(1159..>2115)
                     /locus_tag="VF061_13330"
     CDS             complement(1159..>2115)
                     /locus_tag="VF061_13330"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEX6670540.1"
                     /translation="HASIILPFFLGAGLALFLYPRLSDDSVSFTGFALFLGAAMSVTA
                     FPVLARMLTEHGMLKTRLGSVTIAAAAVDDVTAWCILAVVIVVVRTAEAPMSIPMMLG
                     GTLLYVIAMLTVVRWGLRRLEVALEARGGLSQDIVSIVVFLVLASAWTTERLGVHAVF
                     GAFLAGVVMPRDEQLVRPLLDRFHDLLVILFLPLFFAFTGLRTSITLITGDLWVYCAL
                     IIAVAVFGKLGGSALAARTAGMSWRDSWAIGTLMNTRGLMELVVLNIGLDIGVISPAL
                     FAMMVLMALVTTFMTSPVLERIYPARLLALRGSQPKPESKPV"
BASE COUNT          360 a          739 c          710 g          306 t
ORIGIN      
        1 cgttgccctc tacttgctcg tcgctctcct gtggctggtt ccggaccgtc gcatcgagcg
       61 cgcgctgtct catgcgagct ccggccccgg cactccgcca ggatccgcct gaccccgcgc
      121 ctgcagccac cgcgtcgggc ggcgatctac gcgttcgtga gggccttcca tcgccctaac
      181 cgctccagga tcagctcggc gcgctgccga tcgtcgggtc cgtccatcac gctcatgtcc
      241 ccgggctcgg cgcgccagaa cactccggcc gtccgcgcgt tcacagccgg atcgttggcc
      301 gcccgggtcg tgaagtagcc ggacgcacga tcggccgatt ccaaccggat ctctcccgtc
      361 ccgtccagct gcggcgcgtc cgggtctcgg ggccgttccc cctgccaatg gtagaagacg
      421 cccgaaggct ctttcctctc cttcgtcgcg tcgctccagt acctcgccga gaggctgcca
      481 tcctcctgcc acgagcggcc ggtcagctcc agcgccccgt cgcggtcccg cgagatccgc
      541 agcaggctga cggcggaagg ctcccgcggc ccgcgcgccg tcaaggagaa ctgccaccac
      601 agaccttcga tgcgcgcgac ccgtccctcg gtctcgatcg cattccgcag cttctggttg
      661 aggatcttca tctcggaagg cgtcgtgccg tcgtcgtagc gcacgcagat gaggccgagg
      721 agatcggtcg gaagcttgga gccgcgggaa tggatgatga acgtccgtcg catgccgagg
      781 acgccgccga acaggcccgc ttcgaacacc acattgtccc ggggcgaatc ctgtccggtg
      841 cccggggccg gggaggcagc cgggctggtg gtcgtccaat cgtcccgggc gaacacgaac
      901 gcggcgaagt cgacctcgtg ggccagctcg acgagacggt ccagcgtgct ggtcccgggg
      961 gtcaaggatg tggtccaggg ctcgacctgc gcgacgtcct ggaggccgcg ggtcaacgcc
     1021 tgcagcagct tcacctgttt gcccgacgag ccgagaaaga tgcgaggttt gtccatacgt
     1081 tctcccacag caggtgcggg cccgggatcc gagcgaggcg gtgggctcgg agatcaggcg
     1141 aacccggcag ccgatcgatc acaccggctt cgattccggc ttgggttgac tgccccgcag
     1201 cgcgagcagc cgcgccgggt agatgcgctc gagcaccggg gacgtcatga acgtggtgac
     1261 gagggccatc agcaccatca tcgcgaaaag cgccggagag ataacgccta tatccaggcc
     1321 gatgttcagc accaccagct ccatgagccc ccgggtgttc atcagcgtgc cgatcgccca
     1381 ggagtcccgc caggacatcc ctgccgtgcg ggcggccagc gcggagccgc ccagcttccc
     1441 gaacaccgcc acggcgatga tgagcgcgca atagacccag aggtcgcccg tgatcagggt
     1501 gatgctggtg cgcaggccgg tgaacgcgaa gaagagcggc aggaacagga tcaccagcag
     1561 gtcgtggaac cggtccagca ggggccgcac cagctgctcg tcgcgcggca tcaccacacc
     1621 cgccaggaac gcgccgaaca ccgcgtgcac ccccagccgc tcggtggtcc aggcggaggc
     1681 gaggaccagg aacacgacga tggagacgat gtcctgggac agcccgccgc gggcctccag
     1741 ggcgacctcc agccggcgca ggccccagcg caccaccgtc agcatcgcga tcacgtagag
     1801 cagcgttccg cccagcatca tgggaatgga catcggcgct tccgcggtgc gcaccaccac
     1861 gatgacgacc gcgaggatgc accaggcggt cacatcgtcc accgccgccg cggcgatggt
     1921 gacgctgccg agccgggtct tcagcattcc gtgctcggtg agcatgcggg cgagcacggg
     1981 aaaggccgtc acgctcatgg ccgcgccgag gaagagggcg aagccggtga agctcacgct
     2041 gtcgtcggag agcctcgggt agaggaagag cgccaggccc gcgccgagga agaacgggag
     2101 aatgatgctg gcgtg
//
LOCUS       DASUYN010000684         5672 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_216378, whole genome shotgun sequence.
ACCESSION   DASUYN010000684 DASUYN010000000
VERSION     DASUYN010000684.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5672)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5672)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5672
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_216378"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..276)
                     /locus_tag="VF061_13335"
     CDS             complement(<1..276)
                     /locus_tag="VF061_13335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670541.1"
                     /translation="MARTLTVSRVRVRAEVEAEYLASVRELARLAEGRGRRLWVFRKP
                     DESGTFLEFSESRSRETHRAVAERPADERELEARIRAAAEYAPDAWEL"
     gene            complement(278..1720)
                     /locus_tag="VF061_13340"
     CDS             complement(278..1720)
                     /locus_tag="VF061_13340"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoamide acetyltransferase family
                     protein"
                     /protein_id="HEX6670542.1"
                     /translation="MATIDVIMPQMGESIAEGTLSRWIKKQGDPVKRDEPIFEISTDK
                     VDAEIPAPAAGVLSEILVQEGETVAVQTVVARIDTEAAAGAAKPPASPSAPESAAPAP
                     APTPAPATAPAAVAPAPPPPPKPAPAPPSVPAAPAARPAAEKARSGHVAEGNGEMETA
                     EERLRRRSTPLVRKIAAEHGLDLREIPGTGLAGRVTKNDVLGYIDSGAAARRGGGEPP
                     PAPAATPAAEPVAAAAPPPRAPAPAVEPWDGYRVEPWSRIRKLTAEHMVMSRRVSPHV
                     NTVFEVDYTRVVQLRARKKQEYAERGVNLTFLAFIAKAAADALRRHPTLNAAVSGEST
                     ILRRDINLGIAVALEWGLIVPVVRHADELALLGLARAINDLGERARTKKLSPDEVQRG
                     TFTITNPGVFGSVIGMPIINQPQAAILCVGAIEKQPAVITVDGTDSLAIRTRGLLSLA
                     FDHRIVDGADADRFMADVKKTLQEFPEAAV"
     gene            complement(1775..2752)
                     /locus_tag="VF061_13345"
     CDS             complement(1775..2752)
                     /locus_tag="VF061_13345"
                     /EC_number="1.2.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF006667.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HEX6670543.1"
                     /translation="MAEVTYLEAIRQALFEEMERDPDVFCMGEDIARYGGAFKVTHGL
                     LDRFGPERVIDTPISETGFVGAAAGAAHMGMRPVCEMQFIDFISCAYSILTNYVATAR
                     YRAFLPCPMVVRGPSGGYVRGGPFHSQNPEAAFLHTPGLKIVYPATAADAKGLLKAAI
                     RDEDCVLFFEHKYLYRRIKQELPQDDHVVPIGKARLAREGTGLSIITYAATVWKALEA
                     AEQLEREDGLSVEVLDLRSLLPMDDEAIAATVKKTNRVLIVHEDTVTGGIAGEITARI
                     QDLAFEWLDAPVKRVAAHDVALPYAPQLEDFVLPQTTDIVRAARWLAAY"
     gene            complement(2745..3764)
                     /locus_tag="VF061_13350"
     CDS             complement(2745..3764)
                     /locus_tag="VF061_13350"
                     /inference="COORDINATES: protein motif:HMM:NF012880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent dehydrogenase
                     E1 component subunit alpha"
                     /protein_id="HEX6670544.1"
                     /translation="MRLTRSLEERLVNLYRQTKVVGGLFRSLGQEACAVGSAYALRRE
                     DVLSPLIRNLGSMLVKGATPVEVLRQYMAKGDSPTRGRELNIHFGDVVDRNFVGQISH
                     LGDMVPVMAGVTLSFRLRKQPRVGLVYVGDGATSTGAFHEGINFAAVQRCPLVVVVEN
                     NCYAYSTPTDQQCAAERLAEKAAGYGIPGVRADGNDVLEVYRVTREAVDRARAGEGVT
                     LLELMTYRRKGHAEHDNQSYVPAGEIERWARENDPLDRYVKVLTDGERIAAEELGALD
                     ARVTAEIDRATDEAEASPPPEPLDALEGVYADPPRMPVLWYREGVRSAVERHERPASW
                     GTHDG"
     gene            4008..4895
                     /locus_tag="VF061_13355"
     CDS             4008..4895
                     /locus_tag="VF061_13355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HEX6670545.1"
                     /translation="MRHGWRAAALVLCLALPPAACAGSSTDITPPSGNPPPPEEPEPP
                     TPPPSQPPAPPSPSEPPPSPEPGPPVPNPAGIGAGARVLFIGNSLTQGNDVPGLVRVL
                     AAAAGLNWQVDAQLLGGAGLQDHWERGLAQAKIQSGDWDAVVLQQGPSSLPESRADLR
                     QWTAEFDALVRQGGGRSALYMVWPDLSRFEWFDRVRDSYALAARDVDGWFLPAGEAWR
                     AAWAEEPGLQLYGGDGFHPTVAGSWAAALAIFAGLSGRSTENLPAPAALDPTTAQRLR
                     RAAAEALETWGDYGPQDVP"
     gene            complement(4892..5554)
                     /locus_tag="VF061_13360"
     CDS             complement(4892..5554)
                     /locus_tag="VF061_13360"
                     /inference="COORDINATES: protein motif:HMM:NF024206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HEX6670546.1"
                     /translation="MLLRRLALIGLLSLPPATAAGQERNIHYQLLVAAREGRAATVRS
                     LLDGGAKPDSRDRNGDTPLNHLARRGDLELARLLLERGATPGLPNLAGVTPLMSAAYG
                     GHDAVVRLLLERGAAPGATDQLDKTAMVYAAGGGHSDCVRALLDGGVDVNARYRHQLT
                     ALIWAAGSGSLTTVQVLLQRGADPGARDDRGKTALAVAEEEGHAEIVEVLRAECQRNG
                     GC"
BASE COUNT          752 a         2089 c         2008 g          823 t
ORIGIN      
        1 cagctcccac gcgtcgggcg cgtactccgc ggcggcgcga atgcgcgctt ccagctcccg
       61 ctcgtcggcc gggcgttcgg ccacggcgcg atgcgtctcc cggctccggc tctcgctgaa
      121 ctccaggaag gtgccggact cgtccggctt ccggaacacc cagagacgcc ggccgcggcc
      181 ttccgccagg cgcgccaact cgcgcaccga cgcaaggtac tccgcctcga cctccgcccg
      241 caccctcacg cgcgacacgg tgagcgtgcg agccatgcta gaccgccgcc tcggggaact
      301 cctggagcgt cttcttcacg tcggccatga agcggtcggc gtcggcgccg tccacgatcc
      361 ggtggtcgaa ggcgagcgac agcaggcccc gggtgcggat cgcgaggctg tcggtcccgt
      421 ccaccgtgat caccgccggc tgcttttcga tcgcgcctac gcagagaatc gcggcctgcg
      481 gctgattgat gatcggcatg ccgatcaccg agccgaacac ccccggattg gtgatggtga
      541 acgtccctcg ctgtacctcg tcggggctca gcttcttggt ccgggcacgc tcgcccaggt
      601 cgttgatcgc gcgggcgagg ccgaggaggg ccagctcgtc ggcgtggcgg acgaccggga
      661 cgatcagccc ccactccagc gcgaccgcga tcccgaggtt gatgtcgcgg cgcaggatcg
      721 tgctctcacc ggagaccgcg gcattgaggg tcgggtgccg ccgcagcgcg tcggcggcgg
      781 ctttggcgat gaaggcgagg aaggtgaggt tcaccccgcg ctccgcgtac tcctgcttct
      841 tccgggcgcg aagctggacg acccgggtgt agtcgacctc gaagaccgtg ttcacgtgcg
      901 gcgacacccg ccgcgacatc accatgtgct cggcggtgag cttgcggatg cggctccagg
      961 gctcgacccg gtagccatcc cagggctcca ccgcgggggc cggggcgcgc ggcggcggcg
     1021 ccgcggccgc cacgggctcg gccgcaggcg tggccgccgg cgccgggggc ggttccccgc
     1081 caccccggcg agccgcggcg ccgctgtcga tgtagcccag cacgtcgttc ttggtgaccc
     1141 ggcccgcgag cccggtcccc gggatctccc tcaggtcgag accgtgctcg gccgcgatct
     1201 tgcgcaccag cggggtcgag cggcggcgga gccgctcctc cgccgtctcc atctcaccgt
     1261 tgccctccgc cacgtgcccg gaccgtgcct tctcggccgc gggacgggcg gcaggggcgg
     1321 ccgggaccga ggggggcgcg ggtgcgggct tcgggggcgg cggaggtgcg ggcgccacgg
     1381 cggcgggggc ggtagccggg gccggcgtgg gagccggagc cggcgcggcg gactcgggcg
     1441 ccgacgggga cgccggcggc ttcgcggcac ccgccgccgc ctcggtgtcg atccgcgcca
     1501 cgaccgtctg caccgcgacc gtctcgccct cctgcaccag gatctcgctc aggacgcccg
     1561 cggccggggc cggaatctcg gcgtccacct tgtcggtgga gatctcgaag atcggctcgt
     1621 cccgcttcac cgggtcaccc tgcttcttga tccagcggga gagcgtaccc tccgcgatgg
     1681 actcgcccat ctggggcatg atcacgtcta tcgtcgccat cgatcactcc ttgtgtgcgg
     1741 agcatcggac gctccgccgc tcacaatggc ctctctaata agccgcgagc cagcgcgccg
     1801 cccggacgat gtcggtcgtc tggggcagca cgaagtcctc cagctgcggc gcgtagggga
     1861 gcgccacgtc gtgcgccgcc acccgtttca ccggcgcgtc cagccactcg aacgcgagat
     1921 cctgaatgcg cgccgtgatc tcgccggcga tgcccccggt caccgtgtcc tcgtggacga
     1981 tcagcacccg gttggtcttc ttcaccgtcg cggcgatggc ctcgtcgtcc atcggcagca
     2041 gcgaccgcag gtcgagcacc tccaccgaga gcccgtcctc ccgctccagc tgctccgcgg
     2101 cctccagcgc cttccacacg gtcgccgcgt acgtgatgat cgagaggccc gtgccctccc
     2161 gagcgaggcg ggccttcccg atcggcacca cgtggtcatc ctggggcagc tcctgcttga
     2221 tccggcggta gagatacttg tgctcgaaga agagcacgca gtcctcgtcc cggatcgccg
     2281 ccttgagcag ccccttcgcg tccgccgcgg tggcggggta gacgatcttg agcccggggg
     2341 tgtgcaggaa cgccgcctcg gggttctggg agtggaaggg cccgccacgg acgtagccgc
     2401 cgctgggacc gcgcaccacc atgggacagg gcagaaacgc ccggtaccgc gcggtggcca
     2461 cgtaattggt gaggatgctg taggcgcagg agatgaagtc gatgaactgc atctcgcaca
     2521 ccggccgcat gcccatgtgc gccgcgcccg ccgccgcgcc cacgaacccg gtctcgctga
     2581 tcggggtgtc gatcacgcgc tccggcccga accggtcgag cagcccgtgg gtcaccttga
     2641 acgcgccgcc gtaccgcgcg atgtcctccc ccatgcagaa gacgtccggg tcgcgctcca
     2701 tctcctcgaa cagggcctgg cgaatcgcct ccaggtaggt gacctcagcc atcgtgggtc
     2761 ccccagctcg ccgggcgctc gtgccgctcc accgcgctgc ggacgccctc gcggtaccac
     2821 agcaccggca tgcggggcgg atcggcgtac acgccttcga gcgcgtcgag cggctccggc
     2881 ggcggtgagg cttcggcctc gtcggtcgcc cggtcgatct ccgccgtcac ccgcgcgtcg
     2941 agcgcgccga gctcctcggc ggcgatgcgc tcgccatcgg tgagcacctt gacgtagcgg
     3001 tcgagcgggt cgttctcccg ggcccagcgc tcgatctccc ccgccggcac atacgactgg
     3061 ttgtcgtgct ccgcgtggcc ctttcgccgg tacgtcatca gctccagcag ggtgacgccc
     3121 tccccggccc gggcgcggtc caccgcctcg cgggtgacgc ggtacacctc gagcacgtcg
     3181 ttcccgtcgg ccctgacgcc gggaatgccg tagcccgccg ccttctcggc cagccgctcc
     3241 gccgcgcatt gctgatccgt cggtgtggag taggcgtagc agttgttctc gaccacgacg
     3301 accagcgggc agcgctgcac cgccgcgaag ttgatgccct cgtggaaggc ccccgtggag
     3361 gtggccccgt cgcccacgta caccagtccg acgcgcggct gcttgcggag cctgaacgag
     3421 agggtgaccc ccgccatcac cggcaccatg tcgcccaggt gcgagatctg gccgacgaag
     3481 ttccgatcca ccacgtcgcc gaaatggatg ttgagctcgc ggccgcgggt cggagaatcc
     3541 cccttcgcca tgtactgccg cagcacctcg accggggtgg cccccttcac cagcatggag
     3601 cccaggttcc ggatcagcgg ggagagcacg tcctcgcgcc tgagggcgta ggcggacccc
     3661 accgcgcagg cttcctgtcc cagggagcgg aacaggccgc ccaccacctt ggtctgccgg
     3721 tagaggttca ccaaccgctc ctcgagcgac cgggtaagcc tcatccagta atagagttcg
     3781 aggagttggt cgcgggggag accgccggcg gcgggagggg acggagcggt tgctgacgtg
     3841 gcggccatgc ggatcctggt tgtgggtatc gcaacccggg caggaaaatc caccggggcc
     3901 ggagtggagt caagctgaac gcaggcgtgc cgacgccgcg cccatcggcg tcccctgtgg
     3961 agcagcaggc cggcggcatt cccacgaggc aggtcgagga ggcgtccatg cgccacggtt
     4021 ggcgggcggc ggcgttggtc ctgtgtctgg ccctgccccc ggcggcctgc gcgggctcat
     4081 ccaccgacat cactccgcca tcgggcaacc cgccgccgcc cgaagagccg gagccaccca
     4141 ccccgccgcc ctcccagccg ccggctcctc cctcgccctc ggagccccca ccgtcgcccg
     4201 agccgggacc cccggtgccc aacccggccg gcatcggggc cggcgcccgg gtgctcttca
     4261 tcggcaacag tctcacgcag ggcaacgatg tgccgggcct ggtgcgggtg ctggccgcgg
     4321 cggccggtct caactggcag gtggacgccc agctgctggg cggcgccggt ctgcaggacc
     4381 actgggagcg gggcctggcc caggcgaaga tccagagcgg agactgggac gcggtcgtgc
     4441 tgcagcaggg tccgtcgtcc ctccccgaga gccgcgccga cctgcggcaa tggaccgccg
     4501 agttcgatgc gctggtgcgc caggggggcg gacggtcggc gctgtacatg gtatggccgg
     4561 acctgagccg gttcgagtgg ttcgaccggg tccgcgactc gtacgcgctg gcggcccggg
     4621 acgtggacgg ctggttcctt ccggcgggcg aggcctggcg ggcggcctgg gccgaggaac
     4681 cggggttgca gctctacggg ggcgacgggt ttcatccgac ggtcgccggc agctgggccg
     4741 ccgcgctggc catctttgcc gggctctccg gccggtccac cgagaatctg cccgcgcccg
     4801 cggctctcga ccccaccacg gcccagcgcc tccgccgggc cgcggcggag gcgctggaga
     4861 cctgggggga ttacgggccg caggacgtgc cctagcaccc accgttccgc tggcactccg
     4921 cccgcaacac ctccacgatc tccgcgtggc cctcctcctc cgcgaccgcg agcgcggtct
     4981 tgccgcgatc gtcgcgcgcc ccggggtcgg ccccccgctg gagcagcacc tggacggtgg
     5041 tcaggctgcc cgagcccgcc gcccagatca gcgcggtcag ctggtgccgg taccgcgcgt
     5101 tgacgtccac ccccccatcg agcagcgccc gcacgcagtc ggaatggcca ccgcccgccg
     5161 cgtagaccat ggcggtcttg tcgagctggt ccgtcgcccc cggggccgcg ccacgctcga
     5221 gcagcaggcg caccacggcg tcgtggcccc cataggcggc ggacatcagc ggggtgacgc
     5281 cggcaagatt cggaaggccg ggggtcgcgc cgcgctcgag cagcagtcgg gcgagctcga
     5341 ggtcgccccg ccgggccaga tgattgaggg gggtatcgcc gttccggtca cgggagtcgg
     5401 gcttcgcgcc cccgtcgagc agcgaccgta cggtcgccgc gcggccctcc cgggcggcga
     5461 cgagcagttg gtagtggatg ttgcgctcct gaccggcagc ggtggccggg ggcagcgaca
     5521 gcagaccgat cagcgcgagt cgacggagca gcatctcgag tccggagcag agcgttcggg
     5581 aaggggccgc gctgggtaga cttgcggccc tcggcttggg aagtaagata cggcgtcccc
     5641 ccacatcgcg cgcacggttc gctcgacgtc at
//
LOCUS       DASUYN010000685         5333 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1761668, whole genome shotgun sequence.
ACCESSION   DASUYN010000685 DASUYN010000000
VERSION     DASUYN010000685.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5333
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1761668"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..537)
                     /locus_tag="VF061_13365"
     CDS             complement(<1..537)
                     /locus_tag="VF061_13365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670547.1"
                     /translation="MASRKRYRLDRVAVEAGEVRRGKWSFAKGGRQAPVRGNEHFYAV
                     NDGNLAGRNRWEFVVRVPDDSDGRVEIRPRATPPTQTWKALTYRSLQFQKATKGDARG
                     KRYCKVSLAVPPSGRATEDPRGTRTKDVIRWDQRRDLPRWFEGLERRMRMKERVRSTK
                     GTDGNTLVLLVDPDDHAMM"
     gene            complement(742..1932)
                     /locus_tag="VF061_13370"
     CDS             complement(742..1932)
                     /locus_tag="VF061_13370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen-binding domain-containing protein"
                     /protein_id="HEX6670548.1"
                     /translation="MSRARGLLLALLCSAWGSPALGQLAGTLDMGAGTYRPDRSIPGG
                     IASIVPALRYRSGPLELNALGVYSDAPAGRWNFQGGTEALVRTPVFGFLLLEASGRAE
                     WTSHYRVRGTALVSGGMRAYLATGSHARAWVGRTFGRASSLGARRPLRRTEVGGSAMV
                     GTVHLEFTLANTSVDRSYMLSPVDPRGPTADTLSSHPGAGGQPQVDRVALTDAVLSGR
                     WRLRSVDFDASLGRRFSRFAPEATIWGLSAARDLSPTLALVAAAGRAGSDPVTSVPGA
                     RYFAIGLRLKVGSPSLAPLPMLAATEASAPFRIGPPVAAGREIVVRAPAADTVELAGD
                     FTDWKPVALRRWGEDSWRILLPVAPGLHRLAIRIDRGEWRAPPGTRPVQSEFGGEVAE
                     VVVE"
     gene            complement(1929..2531)
                     /locus_tag="VF061_13375"
     CDS             complement(1929..2531)
                     /locus_tag="VF061_13375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670549.1"
                     /translation="MSLARVASLSVSLLLVLPAIATAQDARLTERLDPGTAAQVQQVV
                     DSASVAGLPGEPLVQKALEGSTLGASGDRIVAAVRALHGQLRGAREALGGDASESELT
                     AAAGALRAGLQPGALRRLQSLRAGRPLVVPIAVLTDLVAEGVPPEEATRSVLDLARAG
                     RPDDDFVALRRQVQVRRRGDGGEPMGRPALRPAADPPVDR"
     gene            complement(2535..3068)
                     /locus_tag="VF061_13380"
     CDS             complement(2535..3068)
                     /locus_tag="VF061_13380"
                     /inference="COORDINATES: protein motif:HMM:NF027875.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoamylase early set domain-containing protein"
                     /protein_id="HEX6670550.1"
                     /translation="MSAEPDDTLDDEILQHAVAELRRPVLLDPAVDQRALARIRAESA
                     GWAASPRGRGWGAWIAGAAVAAGVMLAVALPDRSPTPASSEDVPAEARPVRLRLAAPA
                     SSRVAVVGDFNDWDPAATPLHPSGDGGTWVVELRLKPGRYHYTFLIDGRRWARDPSEP
                     PAAGSDFGAPVSVLTVS"
     gene            complement(3058..3594)
                     /locus_tag="VF061_13385"
     CDS             complement(3058..3594)
                     /locus_tag="VF061_13385"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HEX6670551.1"
                     /translation="MSDSDAALVARTLGGDLPAYAALMARYRDKFGRYAFHMLGNRED
                     AQEALQDSFVRAYRSLGTCRQPERFGAWLFRIVVNRCRTVRRRLQRARRFDADLPDDV
                     AAVGNRPDAFEWRDEIGLALEQLRPHYREAFLLRYVEGLEYAEMARMTGAKEPALRMR
                     VKRASDQLRELLRDVHVR"
     gene            3719..4561
                     /locus_tag="VF061_13390"
     CDS             3719..4561
                     /locus_tag="VF061_13390"
                     /inference="COORDINATES: protein motif:HMM:NF025679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4382 domain-containing protein"
                     /protein_id="HEX6670552.1"
                     /translation="MKHSGLALMVAALAACSASETGPAGPAAAGKTAVFLTDAPFPFD
                     RIARVDIHILEIGLSPQADTSEGLPTWVTVARPERAFNLLDLQNGATALLGEADVPPG
                     QYRAVRVTFDPERSGMTDRDGGHPTIDWQAKGDAPTLFGLVEEPMAIDENGEDIVIDF
                     DVGRSFLPDSATGGFLFIPFLRAITRAGSGAIAGTLVNAETGEPIPLAAVSIHYAFDT
                     TSALGPLMATSRTDQSGAFRASFLRPGRYAVLPEDLGRRLSGPVRTVDVSAGETAEVG
                     ELRF"
     gene            4656..>5333
                     /locus_tag="VF061_13395"
     CDS             4656..>5333
                     /locus_tag="VF061_13395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670553.1"
                     /translation="MRPLFHRRDLLRLAAAGLAAALAPACGTRSARRAELPSASDRQR
                     QHANGHLTSRPRPPVAGTPPTGLIPLQLSGSDRDGVLYVPPSYAADTPAPLVLSLHGA
                     GGSGRRGLPRLRALADDLGLLLLSPDSRAPTWDVVRTGFGPDVEFVDRALDLVFARYA
                     VDPARVAAEGFSDGASYALSLGLINGGLFTHVIAFSPGFVLAERRRERPRCFVSHGLR
                     DPVLPIDP"
BASE COUNT          735 a         1994 c         1895 g          709 t
ORIGIN      
        1 catcatcgcg tggtcgtcgg ggtccaccag gaggacgagt gtgttgccgt cggtgccctt
       61 cgtgctccgc acccgctcct tcatccgcat ccggcgctcg agcccctcga accaccgcgg
      121 caggtcgcgg cgctggtccc agcggatcac gtccttggtg cgggtgccgc gaggatcctc
      181 ggtggcacgg cccgagggcg ggaccgcgag cgagaccttg cagtaccgct tgccccgcgc
      241 gtcgcccttg gtggctttct ggaactggag cgaccggtag gtcagcgcct tccaggtctg
      301 ggtcggcggc gtggcccggg gccggatctc gactcggccg tccgagtcgt ccgggacgcg
      361 gacgacgaac tcccatcggt tccggccggc gagattgccg tcattcactg cgtagaagtg
      421 ctcgttcccg cgcaccgggg cctgacgccc gcccttggcg aagctccact tgccccgccg
      481 cacctcgccc gcctccaccg ccacccgatc cagccgatac cgcttccgcg aagccatcgg
      541 tcgcctcctg ggactggggg aagaagcttg ccgacgtcgc cgaaggatac ccgggctcac
      601 tcctccaccc aatacgacgg gccgcccaat acgacgggcc gccgtccgcg gcgcgatcgt
      661 catccaacgg ctctctgcgg agcgttgtat cgggaagcag ggcgctgagc agcacccgga
      721 ggatgggcgc ggaaggcccg gttactcgac caccacctcg gcgacttcgc cgccgaactc
      781 gctctggacc ggccgggtgc cggggggcgc gcgccactcg cccctgtcga tgcggatcgc
      841 cagccggtgg aggccgggag caacgggcaa caggatgcgc caggagtcct caccccaccg
      901 ccgcagcgcg acgggcttcc agtcggtgaa gtctccggcg agctccacgg tgtcggccgc
      961 cggcgcccgc accacgatct cgcggcccgc cgcgaccggt ggtccgatcc ggaagggggc
     1021 ggaagcctcg gtcgccgcca gcatcggcag gggcgcgagc gacggggacc ccaccttgag
     1081 ccggagtccg atcgcgaagt aacgggcccc gggtaccgag gtgaccgggt cggagcccgc
     1141 cctgcccgcc gccgccacca gcgccagggt cggggagagg tcacgcgccg cgctcaggcc
     1201 ccagatcgtg gcctcggggg cgaagcggct gaagcggcgg cccagggagg catcgaagtc
     1261 gaccgagcga agacgccagc ggccggagag caccgcgtcg gtgagcgcca cccggtccac
     1321 ctgaggctgc cctcccgccc ccggatggga ggacagcgtg tcggcggtcg gacctcgcgg
     1381 gtcgaccggg ctgagcatgt acgaccggtc caccgacgta ttggccaggg tgaactcgag
     1441 gtgcacggtg ccgaccatgg ccgatccgcc gacctcggtg cggcggagcg gccggcgcgc
     1501 gcccagcgac gacgcccgcc cgaatgtgcg gccgacccat gcccgcgcgt gtgaccccgt
     1561 cgcgagatac gcgcgcatgc cgcccgacac caacgcagtg ccgcgcacgc ggtaatggct
     1621 ggtccattcg gccctgccag atgcctcgag gagcaggaag ccgaagacgg gcgtgcgcac
     1681 cagggcctcc gtaccgccct gaaagttcca gcggcccgcc ggggcgtccg agtacacgcc
     1741 gagggcgttg agctccagcg gtccgctgcg gtagcggagg gcgggcacga tcgaggcgat
     1801 gcccccgggg atcgagcggt cggggcgata ggtgccggcg cccatgtcca gcgtgccggc
     1861 gagctgtccc agcgcgggcg agccccaggc cgagcagagc agcgccagga ggagtccgcg
     1921 cgcgcgactc atcggtccac cggggggtcg gcggcgggcc ggagcgccgg ccggcccatc
     1981 ggttcgcctc cgtcgccgcg ccgccgcacc tggacctgcc ggcggagggc gacgaagtcg
     2041 tcgtccggcc ggccggcgcg agcgaggtcc agcaccgagc gggtcgcctc ctcgggcggc
     2101 acgccctccg cgaccagatc ggtgagcacc gcgatcggca ccacgagcgg tcgtccggcc
     2161 cggagcgatt gcagcctccg gagggcgccg ggctgcagcc cggcacgaag ggcgcccgcc
     2221 gccgcggtga gctcgctctc gctggcgtct ccgccgagtg cctcgcgggc gccgcggagc
     2281 tgtccgtgga gggcccggac ggccgcgacg atgcggtcgc cgctggcacc gagggtgctg
     2341 ccctccagcg ccttctgaac cagcggctcg ccgggaagcc ccgcgacgct ggcggaatcc
     2401 accacctgct gcacctgagc cgcggtgccg gggtcgagcc gctcggtgag gcgggcgtcc
     2461 tgagccgtcg cgatcgccgg cagcaccagc agcagggaga cggacaacga cgcgacgcgg
     2521 gcgagggaca cggctcagct caccgtgagc accgagaccg gtgcgccgaa gtcgctgccg
     2581 gcggcgggcg gctcgctggg gtcgcgcgcc cagcggcgcc cgtcgatgag gaaggtgtag
     2641 tggtagcggc ccggcttgag ccggagctcc accacccagg tgccgccgtc tccggaggga
     2701 tgcagcggcg tagcggcggg atcccaatcg ttgaagtcgc ccaccacggc gacgcgcgag
     2761 gatgccggcg ccgccagccg cagtcgcacc gggcgcgcct cggccggcac gtcctcggag
     2821 gatgccggcg tcgggctccg gtcgggaagc gcgaccgcga gcatcacccc ggcggcgacc
     2881 gcggcgcccg cgatccaggc gccccagccg cggcccctgg gagacgcggc ccaccccgcc
     2941 gactcggccc ggatccgggc cagcgcccgc tggtccaccg cggggtcgag cagcaccggc
     3001 cgccgcagct cggcgaccgc gtgctgcagg atctcgtcgt cgagagtgtc gtcgggctca
     3061 gcggacatgg acatccctca gcagctccct cagctggtcg ctggcgcgct tcactcgcat
     3121 ccggagcgcc ggctccttcg cccccgtcat ccgcgccatc tcggcgtact cgagtccctc
     3181 tacgtaacgc agcagaaatg cctcgcgata gtggggccgg agctgttcca gcgccagacc
     3241 gatctcgtca cgccactcga aggcatccgg tcggttgccc accgcggcca cgtcgtccgg
     3301 aaggtcggcg tcgaagcggc gggcccgctg gagccggcgt cgtaccgtgc ggcagcggtt
     3361 gaccacgatg cggaagagcc aggcgccgaa tcgctccggc tgccggcagg tcccgagcga
     3421 gcggtaggcc cggacgaagc tgtcctgcag ggcctcctgg gcgtcttccc ggttgcccag
     3481 catgtgaaaa gcgtagcgcc cgaacttgtc gcggtagcgc gccatcaggg cggcgtaggc
     3541 agggagatcg ccgccgagcg ttcgggcgac cagcgcggca tcgctgtcgc tcatcctcga
     3601 tagaccaccg ccggatcacg gctgtgacaa cgggtaggtc ggacccgccg cggtcacagg
     3661 gcatgtcacc gccgggtctg agggatcgta caggcacctt caacttcgag aggcgacgat
     3721 gaagcactcc ggacttgcac tgatggtcgc ggcgctcgcg gcctgcagcg cctcggagac
     3781 cggccctgcc gggcccgcgg ccgccggcaa gacggcggtc ttcctcaccg acgccccctt
     3841 ccccttcgac cgcatcgccc gggtggacat tcacatcctg gagatcggcc tttcacccca
     3901 ggccgacacg tcggagggcc tgccgacctg ggtcacggtc gcccggccgg agcgggcctt
     3961 caacctgctc gacctccaga acggggccac cgcgctcctg ggcgaggcgg atgttccgcc
     4021 ggggcagtac cgcgccgtgc gggtcacctt cgaccccgag cggtccggca tgaccgaccg
     4081 ggacggcggc catcccacga tcgattggca ggccaagggc gatgccccga cccttttcgg
     4141 cctggtggag gagcccatgg ccatcgacga gaacggcgag gacatcgtca tcgacttcga
     4201 tgtgggccgc agcttcctgc ccgacagcgc gaccggcggc ttcctcttca tccccttcct
     4261 tcgggcgatc acccgcgccg ggtcgggagc catcgcgggc accctggtga acgcggagac
     4321 cggggaaccc attcccctgg ccgcggtcag catccactac gcgttcgata cgacttccgc
     4381 cctcgggccg ctgatggcca cctcccgcac cgaccagtcg ggcgccttca gggcctcatt
     4441 cctcaggccg ggacgctatg ccgtgctgcc ggaggacctc ggccggcggc tgtcgggccc
     4501 ggtccggacg gtcgacgtga gcgcgggcga gaccgcggag gtgggggagc tgcggttcta
     4561 gcggatgacg ggatcacgtc gaccgaaggt caagacggga cgaggctgat cccgggctgc
     4621 atctccggcg ccgaagcgtt cgtacggtac tggagatgcg ccccctcttc catcgccgcg
     4681 acctgctgcg gctcgccgcc gcggggctgg ccgcggcact cgccccggcg tgcggcactc
     4741 gatccgcccg acgcgcggag cttccatccg cctccgaccg acaacggcag cacgccaacg
     4801 ggcacctgac cagtcgtccc cggcctccgg tggcgggcac accaccgacc ggcctcatcc
     4861 cgctccagct gagtggctcc gaccgggacg gggtactgta cgtcccccct tcctatgcgg
     4921 ccgatacccc ggctccgctc gtgctgtcgc tgcacggggc cgggggaagc ggccgccggg
     4981 gcctgccccg gctccgtgcc ctggccgacg atctcgggct gctcctcctc tcccccgact
     5041 cgcgggcccc gacctgggat gtcgtgagga ccggattcgg acccgacgtc gagttcgtgg
     5101 accgcgccct ggatctggtc ttcgcgcgct acgcggtgga tccggcccgg gtggccgcgg
     5161 aaggcttctc cgacggcgcc agctacgccc tgtccctcgg cctgatcaac ggcggcctct
     5221 tcacccacgt cattgcgttc tcccccggct tcgtgctggc cgagcgacgc cgggagcggc
     5281 cgcgatgctt cgtctcccac ggcctgcggg acccggtcct gcccatcgat ccc
//
LOCUS       DASUYN010000686         2114 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_658417, whole genome shotgun sequence.
ACCESSION   DASUYN010000686 DASUYN010000000
VERSION     DASUYN010000686.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2114)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2114)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2114
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_658417"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..408
                     /locus_tag="VF061_13400"
     CDS             <1..408
                     /locus_tag="VF061_13400"
                     /inference="COORDINATES: protein motif:HMM:NF015535.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P1 family peptidase"
                     /protein_id="HEX6670554.1"
                     /translation="CPAGATREEQDQGSIIVVVATDAPLLPHQLRRVARRAALGIGRM
                     GGIAGAGSGDLFIAFSTASVGTGEDRVRKVEMLGDERIDPVYEATVQATEEAIINAML
                     AAKTMRGADGYVVPALPHDRLRQALRKYGRLAN"
     gene            complement(405..1253)
                     /locus_tag="VF061_13405"
     CDS             complement(405..1253)
                     /locus_tag="VF061_13405"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX6670555.1"
                     /translation="MSAAALPSATVAAVLLPGERLRVDAAGNGCFAVVHRDSVPDAVR
                     VVRERAVDAVLLSVHRCPPEQVEAVRHLVHEFPGIPTVALVSQHDPSSTEMLLRLGAS
                     GVQQVVDVTSPTGWNRLRQVVGQPATRAVARIQGPMLAALAEAPADARLFVEAMIRLA
                     PDTPTVTALAERLYVRPSTLMSRFARAGLPSPKNYLSAVRLLHAAYLFESAGLSVADV
                     AYRLEYSSPQSFGRHLRAMLGVTALEFRRRYPFPLALERFIEVMVEPYRETWRDFHPV
                     AGGQVG"
     gene            1422..>2114
                     /locus_tag="VF061_13410"
     CDS             1422..>2114
                     /locus_tag="VF061_13410"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX6670556.1"
                     /translation="MSHPTPDPFAALQAALEPQYRLERELGRGGMGVVYLATDTTLDR
                     PVAIKVVHPELAAHASIVRRFLAEARTIARLRHPGIVAVHAAGTAQGLLYYVMDQVEG
                     ESLRERLDRGGKLPIADVARIVGDLASALEAAGRAGVVHRDVKPENVLLEQGTGRALL
                     ADFGIARAMVAEGASSTGQGVAVGTPAYMSPEQAAGEEVDSRSDLYALGIVAYEMLAG
                     HPPFQGANRVVVS"
BASE COUNT          325 a          741 c          784 g          264 t
ORIGIN      
        1 tgcccggcgg gggcgacgcg ggaggagcag gaccagggca gcatcatcgt cgtggtcgcc
       61 accgacgcgc cgctcctgcc gcaccagctc cggcgggtgg cgcgccgcgc ggcgctcggc
      121 atcggacgga tgggcgggat cgcgggggcc ggctcggggg acctgttcat cgccttttcg
      181 acggcgagcg tcggcaccgg cgaggaccgg gtccggaagg tggagatgct gggtgacgag
      241 cggatcgacc cggtgtacga ggcgaccgtg caggcgacgg aggaagcgat catcaacgcg
      301 atgctggcgg cgaagacgat gcggggcgcg gatgggtacg tcgtgccggc gctgccgcac
      361 gaccgcctcc ggcaggccct gcggaagtac gggcggctgg cgaactagcc gacctgcccg
      421 ccggccaccg gatggaagtc cctccacgtc tcccggtatg gctccaccat cacctcgatg
      481 aatcgctcca gcgccagcgg aaacgggtag cgccgccgga actcgagcgc ggtcacgccg
      541 agcatggccc gcaggtggcg gccgaagctc tggggagagg agtactccag ccggtaggcc
      601 acgtcggcca ccgagaggcc ggcggactcg aacaggtacg ccgcgtggag caaccggacc
      661 gcggagaggt agttcttggg tgaaggcagc cccgcccgcg cgaagcgcga catcagcgta
      721 ctcggccgga cgtacagccg ctccgcgagc gcggtgacgg tcggggtgtc gggggcgagg
      781 cggatcatcg cctccacgaa cagccgggca tccgccggcg cttcggccag cgcggcgagc
      841 atgggcccct ggattcgggc gaccgcccgc gtggccggct gacccaccac ctggcgcagc
      901 cggttccacc cggtgggcga ggtgacgtcc accacctgct ggactccgga ggcgccgagc
      961 cggaggagca tctcggtgga ggagggatcg tgctgggaga ccagcgccac cgtcgggatg
     1021 ccggggaact cgtgcaccag gtggcgcacg gcctccacct gctccggcgg acagcggtgc
     1081 accgacagga gcaccgcgtc caccgcccgt tcccgcacca cccgaaccgc gtccggcacc
     1141 gagtcgcgat ggaccaccgc gaagcagccg ttgcccgccg catccacccg gagccgctct
     1201 cccggcagga gcacggcggc gacggtggcg gacgggagag cggcggcgga cacggcatcc
     1261 tccaggcgat ggtgcaagag gatggggttg ggacgtcaaa ctgggttcaa cccgaaacgc
     1321 cgtgaaaccg cgccgcgcgc aaccttttcg ggcgacaagg catcctacga tgacgccggc
     1381 tcggtatatt tgctgaccgt cccctttcga ccggtcttcg catgagccat ccgacgcccg
     1441 accccttcgc ggcccttcag gcagcgctcg agccgcagta tcggctggag cgcgagctgg
     1501 gccggggagg catgggcgtc gtctacctgg cgaccgacac cacgctggat cgcccggtgg
     1561 ccatcaaggt cgtccatccc gagctcgccg cccacgcgtc gatcgtccgc cgcttcctcg
     1621 ccgaggcgcg gaccatcgcg cggctccgcc atcccggcat cgtcgccgtg cacgcggccg
     1681 gcaccgcgca gggcctcctc tactatgtga tggaccaggt cgagggcgag agcctgcggg
     1741 agcggctcga ccgcggaggg aagctgccga tcgccgacgt cgcgcgcatc gtgggagacc
     1801 tggcctccgc gctggaggcc gccggccggg cgggggtggt ccaccgcgac gtcaagccgg
     1861 agaacgtgct gctcgagcag ggcacggggc gcgcgctcct ggccgacttc ggcatcgcgc
     1921 gcgcgatggt ggcggaaggg gcctccagca ccggccaggg cgtcgccgtg ggcacccccg
     1981 cctacatgag tccggaacag gccgccggcg aagaggtgga ctcccggagc gatctctacg
     2041 ccttgggcat cgtcgcgtac gagatgctgg ccggccaccc acctttccag ggggccaacc
     2101 gcgtcgtggt ctcc
//
LOCUS       DASUYN010000687         2141 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_658552, whole genome shotgun sequence.
ACCESSION   DASUYN010000687 DASUYN010000000
VERSION     DASUYN010000687.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2141)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2141)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2141
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_658552"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1059
                     /locus_tag="VF061_13415"
     CDS             <1..1059
                     /locus_tag="VF061_13415"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX6670557.1"
                     /translation="LGWELGTDIGSARLVCSHWGEGYDFGRLERLNGLGSFTWDGVHF
                     LRPGSADGSAGAGEGLPVVVLHGWPSGPVEYEAAARLLSDAGRDVIVPSLPGFAWSAA
                     PAAPLNVAGIAARIRELVGDGLGIGRYAVAGGDWGGIIAARMAFDAPEQVAALYVSTP
                     GVLPTPADLVDPPMSEDEIAYAQRAQHWLRREGHHILIQSVAPDTISPGLADSPAGLA
                     AYLIEKYRRWSDSGGDLERRFSLDQVCDFLTMFWANDAIAPSMRLYWAERRARWRLAP
                     GERITVPAGISVFPGRSEGELSEANTLATLNPPREWSERVLSDLRRHTLMPSGGHFGA
                     FEEPELYARDLLACLDGL"
     gene            complement(1367..>2141)
                     /locus_tag="VF061_13420"
     CDS             complement(1367..>2141)
                     /locus_tag="VF061_13420"
                     /inference="COORDINATES: protein motif:HMM:NF015587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HEX6670558.1"
                     /translation="GLFGDPERITKVLTDTVAQLGPGSAADTFQGPIESITSNRGTAG
                     VMFFVGLALSLWSASGYVGAFSRAQNVIYEAPEGRPFWKLRPLQMLVTLVVVLLLAAV
                     ALSLVLTGPVVDAVAEPIGLSSTAVDAWDVAKWPVLAAVTLLIFAILYYTTPNVKLRG
                     FRFITPGSLVAIVVWLAASAGFALYVSQFGSYDKTYGTLGGLVALLVWMWISNLALLF
                     GAELNAERERDVQIRKGMPGAEKQIQLERRETPDRPTTA"
BASE COUNT          303 a          734 c          783 g          321 t
ORIGIN      
        1 ctcgggtggg agctgggcac cgacatcggc tccgcgaggc tggtctgctc gcattgggga
       61 gagggctacg acttcgggcg gctcgagcgg ctgaacgggc tcgggagctt cacgtgggac
      121 ggtgtgcact tcttgcggcc cggctcggcg gacggctccg ccggcgcggg cgaggggctg
      181 ccggtggtgg tgctgcacgg ctggccgagc gggcccgtgg agtacgaggc cgcggcacgc
      241 ctgctctccg acgccggcag ggacgtgatc gtcccctcgc tgcccggctt cgcgtggtcc
      301 gccgctccgg ccgcgccgct caacgtcgcg ggcatcgccg cgcggatccg ggagctcgtc
      361 ggggacgggc tcgggatcgg ccgctacgcg gtcgccggcg gtgactgggg cggaatcatc
      421 gccgcgcgca tggccttcga cgcgcccgag caggtggccg cgctctacgt cagcacgccg
      481 ggtgtcctgc cgacgccggc ggacctggtg gaccctccga tgagcgagga cgagatcgcc
      541 tacgcgcagc gcgcccagca ctggctgcga cgggagggac accacatcct gatccagtcg
      601 gtggccccgg acacgatttc gccgggcctt gcggactccc cggccgggct tgcggcctac
      661 ctgatcgaga agtacaggcg ctggtcggac tcggggggag acctggagcg ccgcttctcg
      721 ctcgaccagg tctgcgactt cctgacgatg ttctgggcca acgacgccat cgctccgtcg
      781 atgcggctct actgggccga gcgccgtgcg cgctggcggc tcgcgccggg ggagcggatc
      841 actgttccgg cggggatctc ggtgttcccg gggcgcagcg agggtgagct gtcagaggcg
      901 aacacgctgg cgacgctcaa cccgccccgc gagtggtccg agcgcgtgct ctcggacctg
      961 cgccggcaca cgctgatgcc ttcgggaggg cacttcgggg cgttcgagga gcccgagctc
     1021 tacgcgcgcg acctgctggc gtgcctggac gggctctgag cgcactcccc tgccgcgagg
     1081 agcaaacgaa caccgaacga atggcgcttt gttggtctat cgccgaaaag gcgccaaccg
     1141 atggaggggg cgtgaccgga tgcgcgcttt gactccctgc cgtgacttcg gtgccgatgt
     1201 tgcggcatcg cgcgcaggtt cggcactcgg tcgtcagtcc gcgcttccgg gccgctccca
     1261 tgcctcttcg gtgcgggttt tcgagcttga cgtgacgttc tggctccgcg ggcaggccgc
     1321 gccctgcgcg gcgccgatcc cagcggacag ggccggctgg cgcgggctag gccgtggtcg
     1381 ggcgatccgg ggtctcacgg cgctcgagct ggatctgctt ttccgcgccg ggcatgccct
     1441 tccggatctg gacatcgcgc tcccgttcgg cgttcagctc cgcgccgaag agcagcgcca
     1501 gattggagat ccacatccag acgagcaggg cgacgaggcc gccgagcgtg ccgtaggtct
     1561 tgtcgtagga gccgaactgc gagacgtaga gcgcgaaccc ggcggaagcc gcgagccata
     1621 cgacgatcgc caccaggctg cccggagtga tgaagcggaa cccgcgcagc ttcacgttcg
     1681 gcgtcgtgta gtagaggatc gcgaagatca gcagggtcac ggccgccaac acgggccact
     1741 tcgccacgtc ccaggcgtcc accgcggtcg agctcaggcc gatcggctcg gcgaccgcat
     1801 ccacgacggg tccggtcagg accagggaga gcgcgaccgc ggccagcagc agcacgacca
     1861 ccagggtgac cagcatctgg agcgggcgca gcttccagaa ggggcgcccc tcgggcgctt
     1921 cgtagatcac gttctgcgcg cggctgaacg cccccacgta tcccgaggcc gaccacaggg
     1981 agagggcgag tcccacgaag aacatcactc cggcggtgcc ccggttcgac gtgatcgact
     2041 cgatcggccc ctggaacgtg tccgcggccg accccggccc gagctgcgcg accgtgtccg
     2101 tgagcacctt ggtgatccgc tcgggatcgc cgaacagccc c
//
LOCUS       DASUYN010000688         2442 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1100601, whole genome shotgun sequence.
ACCESSION   DASUYN010000688 DASUYN010000000
VERSION     DASUYN010000688.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2442)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2442)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2442
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1100601"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            582..1172
                     /locus_tag="VF061_13425"
     CDS             582..1172
                     /locus_tag="VF061_13425"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX6670559.1"
                     /translation="MIRTMLVADMPLLRSALAAALSHEDGVEVVAEAACSAPLAPIAE
                     SLRADVAVIDLDTPGGPVAAKTLAARCHPILLADTGLAAKAHDMLGSRVGGLLGKDTE
                     PRHLAEAIRTVAGGDRVIDPALAVAAARAWRNPLTPREVDVLQIAAEGVSTAEIAARL
                     HLSRGTVRNYVSSALRKTAAENRTAAARVATVWGWI"
     gene            1251..>2442
                     /gene="lanKC"
                     /locus_tag="VF061_13430"
     CDS             1251..>2442
                     /gene="lanKC"
                     /locus_tag="VF061_13430"
                     /inference="COORDINATES: protein motif:HMM:NF038151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class III lanthionine synthetase LanKC"
                     /protein_id="HEX6670560.1"
                     /translation="MDDRYETFCMADPLFYDVLHSERTAGSTFGTADRPLPAGWRRRE
                     QDDWLVFDPGAALPLQGWKIHASACLDNGERVLDAVWDYCVPRGIPFKFLRSAGALLA
                     RVSKYAPRGYSGKLVTIYPADDVACHTILTELGVLLAGEPGPYILSDLRWGDGPLYVR
                     YGAFVKRHCVTASGQVVPAIADGDGVLVPDRRGPAFHLPGWVTLPDFLAPALAARNAI
                     TLSDVPYTIERVLHFSNGGGIYVGRDTRTDTQVVLKEGRPHAGLDARGEDAVQRIERE
                     YAMLRRLADIPGIPAALDLLSIGEHRFLVMEFVEGMPLNRAIVSRYPLIDITAGPAEY
                     AAYTDWALDVYRQVETAIGAMHTRGVVYGDLHLFNVMVGEAVSILDFEVAAPIETATR
                     PGLGN"
BASE COUNT          359 a          919 c          832 g          332 t
ORIGIN      
        1 gcctcccgtc gagccaccac gggccagtga tccgccgccg aagagcaccc ccgcgaccac
       61 gaatccggtc gccacgccac ccgcggtgaa acggccgccg gccaccaaac cgccaccggc
      121 gaagaagccg atcgccaccc caccgcccgc gccgagcaag ctcgctccga tcgcgccagc
      181 accagcggca gcaccagtac cagtaccagt accagcacag gcgcccacgc acgcgggccc
      241 gaccatgccc gcgccgcacg acttcccgct cgcaccctcg cccgacacgc tcgcgccggc
      301 acagtcgcgg cacggctcca gcgatggcgg cggtgaccaa ctggcggcac tccaaccagg
      361 ccatctgccc ggcaacacca aggtccatag cggactcggt ggtgcccgcg cgcgcaccgg
      421 cctgtactcc gacgctcccc aacggcctgg ctgagctggc cgcgccgtcc gtccgtgccc
      481 agcggcgcgg accgatgacg gctgttcgcg gtatcagctc tgaccgacta tgcccgcccg
      541 ctgtggcgcg ggacgggctg agcccccacg gggagacgac catgatccgc acaatgcttg
      601 tcgctgacat gccgttgttg agaagtgccc tggctgccgc actgtcccac gaggacgggg
      661 tggaagtcgt ggccgaggcg gcgtgttccg ctccgctggc gccgatcgca gagtcgctgc
      721 gggcggacgt cgccgtgatc gacctggata cgccgggcgg cccggtcgcg gcgaagaccc
      781 tcgccgctcg gtgccacccg atcctgctcg ccgacaccgg actggcggcg aaggcccacg
      841 acatgctcgg tagccgtgta ggtgggctgc tcgggaagga caccgagccg cgccacctcg
      901 ccgaggccat ccgcacggtg gccggtggcg accgggtgat cgacccggcg ctggccgtgg
      961 ccgcggccag ggcgtggcgt aacccgctca ccccgcgcga ggtggacgtc ctccagatcg
     1021 cggcggaggg tgtgtcgacg gcggagatcg ccgcgcggct gcacctgtcg cgcggcacgg
     1081 tgcgcaacta cgtgtcgtcg gcgctgcgca agacggcggc cgagaaccgc accgccgccg
     1141 cccgagtcgc cacggtctgg gggtggatct gaacgcaccg tggtttcttc accgtcgatc
     1201 cgtgacagcg ggcactacgg cgcgtaaccc ccgccggcca cgctgaggac atggacgaca
     1261 ggtacgaaac gttctgcatg gccgatccgc tcttctatga cgtactgcac tccgagcgga
     1321 ccgccggctc caccttcggc accgccgacc ggccgcttcc cgccggttgg cggcgccggg
     1381 agcaggacga ctggctcgtg ttcgacccgg gcgccgcgct gccgctgcag ggctggaaga
     1441 tccacgcgtc ggcgtgcctc gacaacggcg agcgcgtgct cgacgccgtc tgggattact
     1501 gcgtgccgcg cgggatcccg ttcaagttcc tccggtcggc gggcgcactg ctcgcgcggg
     1561 tgtcgaagta cgcaccgcgc gggtacagcg ggaagctcgt cacgatctac ccggcggacg
     1621 acgtcgcctg ccacacgatc ctcaccgaac tcggcgtgct cctggccggt gagccgggcc
     1681 cgtacatcct cagcgacctg cgctggggcg acggcccgct gtacgtgcgg tacggcgcgt
     1741 tcgtgaagcg gcactgcgtc accgcgtccg gccaggtcgt ccccgcgatc gccgatggcg
     1801 acggagtgct cgtcccggac cgtcgtggcc cggcgttcca cctccccggc tgggtgacgc
     1861 tgccggactt cctcgcgccc gccctggccg cgcgcaacgc catcacgctg tccgacgtgc
     1921 cgtacaccat cgagcgggtc ctgcacttct ccaacggcgg cgggatctac gtcgggcgag
     1981 acacccgcac ggacacccag gtggtgctca aggaagggcg accccacgcc ggcctggacg
     2041 cccgtggcga ggacgccgtc cagcggatcg agcgcgagta cgcgatgctg cgacgccttg
     2101 ccgacatccc gggcatcccc gcggccctgg acctgctgtc gatcggcgag caccggttcc
     2161 tggtgatgga gttcgtcgag gggatgccgc tcaaccgcgc gatcgtgtcg cggtatccac
     2221 tcatcgacat caccgccggg ccggcggagt acgccgccta cacggactgg gcgctggacg
     2281 tgtaccggca ggtcgagacg gcgatcggcg cgatgcacac gcggggggtg gtctacggcg
     2341 acctgcacct cttcaacgtg atggtcggcg aggccgtctc gatcctcgac ttcgaggtcg
     2401 ccgcgccgat cgagaccgcg acccggcccg ggctcggcaa cc
//
LOCUS       DASUYN010000689         3910 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_658905, whole genome shotgun sequence.
ACCESSION   DASUYN010000689 DASUYN010000000
VERSION     DASUYN010000689.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3910)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3910)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3910
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_658905"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..293)
                     /locus_tag="VF061_13435"
     CDS             complement(<1..293)
                     /locus_tag="VF061_13435"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: protein motif:HMM:NF014641.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004852 - uroporphyrinogen-III synthase
                     activity [Evidence IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HEX6670561.1"
                     /translation="MSGGPVVLTAATGSFPGLAAALRALPAEVLEIPLLTFAPPLDWS
                     PVDDALREVARYQAVAFTSPRAAAAFAARWELAGRPLLPPVWAGAGGTASALAP"
     gene            complement(290..1255)
                     /gene="hemC"
                     /locus_tag="VF061_13440"
     CDS             complement(290..1255)
                     /gene="hemC"
                     /locus_tag="VF061_13440"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: protein motif:HMM:TIGR00212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004418 - hydroxymethylbilane synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HEX6670562.1"
                     /translation="MSGPAALRVGTRGSTLALWQTERVRRLLAEGGHATERIEIRTTG
                     DMVQDVPLARIGSAALFTRQIDEALLAGRIDLAVHSLKDLPTVLPDGLALAAVSERED
                     PSDALVGRGPVRWSDLPRGGTVATSSLRRKAQLLHARPDLQVTDLRGNVDTRLRKLDA
                     SDWSAILLAAAGLVRLDLGHRIGERLPAEVMLPAPGQGALAVTARQDDRRAIEAARSA
                     VHHRTSALAVSAERAFLRRMEGGCQVPVAARAALEGGATLRLQGRVIALDGSRMAEGR
                     EAGAVRELADAERLGVMLAERLLREGAAEILAEIRAGTAPAVSEP"
     gene            complement(1252..2625)
                     /gene="hemG"
                     /locus_tag="VF061_13445"
     CDS             complement(1252..2625)
                     /gene="hemG"
                     /locus_tag="VF061_13445"
                     /EC_number="1.3.3.4"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004729 - oxygen-dependent
                     protoporphyrinogen oxidase activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protoporphyrinogen oxidase"
                     /protein_id="HEX6670563.1"
                     /translation="MAAVAIVGAGLAGLTAAYRLKRKGLRVVVYEASERAGGVIRTER
                     RDGYLAELGPNSMAAVGAVSAELFAQLGLDATRLEAQREARKRYIVRKGKLIALPTAP
                     SQLLTTRLLSNGAKLAIFGEPMVEPGESPMEESVATFVRRRFNQEVLDYIANPFIGGI
                     YAGDPEQLSARHALPRLHDLEHTHGSVMKALGQMMRAGAGPGGPSLTSFTGGLQEISE
                     AFVRELRPELRLKAPVTQIRSGAKGWAVTAAYQPTELYDAVLYAAPAHCADEVDLPFE
                     GGDRVKTLASITHPPVAVLALGFRREDLAHKLDGFGFLVPEVERRNVLGVIFSSSVFT
                     GRAPAGHVLLTAFVGGMRHPDLANADLSTLTARVMDDLRLLLGVRGEPTFRASHLWPK
                     AIPQYALGYGRFKEIMDDAERRNPGLALAGSYREGVALDDVITAATQAADRLAAQVGA
                     GEEVARP"
     gene            complement(2613..>3910)
                     /gene="hemL"
                     /locus_tag="VF061_13450"
     CDS             complement(2613..>3910)
                     /gene="hemL"
                     /locus_tag="VF061_13450"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: protein motif:HMM:NF000818.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0042286 - glutamate-1-semialdehyde
                     2,1-aminomutase activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HEX6670564.1"
                     /translation="GVRAPQLTSASERLFAASQRVIPGGVNSPVRAFKGVGGTPRFIA
                     RGEGAWLVDADGNRYVDLVLSWGPLILGHAHPEVLEAIVRAAEAGTTFGAPTELELKL
                     AERVVATFPSVDMVRFVSSGTEATMSAVRLARAATGRALVIKFDGCYHGHADHLLAAA
                     GSGVATLGLPDSPGVTAGAVGDTLVVPFNDLRAVEALFETREDQIAAVLVEPVPGNMG
                     VVPPASGFLQGLRAVTRRYGALLVFDEVMTGWRAHPRGAQVLYGIEPDLTCVGKVVGG
                     GLPAAAYGGRRDLMERIAPAGPVYQAGTLSGNPLAMAAGLATLEILARPGTWERAERF
                     AGKIAEAVERHARDAGVAVTVQRVGTMLTPFFTPSPVPDFATARRTDRAGYNAFFHAM
                     LDGGVYLPPSAFEAAFTSAVHGDAELSAVEAALASAWRR"
BASE COUNT          521 a         1465 c         1443 g          481 t
ORIGIN      
        1 ggcgccagcg ccgatgcggt gccacccgcg ccggcccaca ccggcggcag caggggccgg
       61 ccggccagct cccatcgtgc ggcgaaggcg gcggcggcgc gtggcgaggt gaaggcgacc
      121 gcctggtagc gggccacctc ccggagggcg tcatccacag gactccagtc gagcggtggg
      181 gcgaaggtca gcagcgggat ctcgagcacc tccgcgggca gggcgcgcag cgcggcggcc
      241 agcccgggaa acgagccggt cgccgcggtg agcaccacgg ggccgccgct cacggctccg
      301 acacggcggg ggcggtgccc gcgcggatct ccgccaggat ctccgccgcg ccttcacgca
      361 ggagccgctc cgccagcatc acgccgagcc gctcggcgtc ggccagctcg cgcacggcgc
      421 cggcctcccg tccctcggcc atgcggctgc cgtccagtgc gatcacccgg ccctggagac
      481 gaagggtcgc gcccccctcc agcgccgctc gggcggccac cggaacctgg cagccgccct
      541 ccatgcggcg gaggaaggct cgctcggcac tcacggcgag cgcgctcgtt cgatggtgta
      601 ccgcactccg ggccgcctcg atcgcccgcc ggtcgtcttg tcgggcggtg acggccaggg
      661 ccccctgccc cggcgccggc agcatcacct cggccggcag ccgctcgccg atccggtggc
      721 ccaggtcgag ccgaaccagt cccgcggcgg cgaggaggat ggcggaccag tccgacgcat
      781 ccagcttgcg cagccgggtg tccacgttgc cgcggaggtc ggtcacctgg agatcgggcc
      841 gggcgtggag cagctgcgcc ttccgccgga gactgctggt ggcgacggtc ccgccccggg
      901 ggaggtcgct ccagcggacg ggcccacggc ccacgagggc gtcgctgggg tcctcccgct
      961 cgctcacggc cgcgagcgcg aggccgtccg gcagcacggt gggcagatcc ttgagggagt
     1021 gcaccgcgag atcgatccgg ccggcgagca gggcttcgtc gatctggcgg gtgaagagcg
     1081 cggcggaacc gatgcgcgcg agcggcacgt cctggaccat gtcgcccgtc gtgcggatct
     1141 cgatccgctc ggtggcgtgc cccccctctg cgagcagccg ccggacccgc tcggtctgcc
     1201 acagggccag cgtgctaccc cgggtgccga cgcgcaaggc cgccgggccg ctcacggtct
     1261 cgcgacctct tcgcccgctc cgacctgcgc cgcgagccgg tccgccgcct gggtcgccgc
     1321 ggtgatcacg tcgtccagcg ccacgccctc gcgataggag cccgccaggg cgaggccggg
     1381 gtttcgccgc tcggcgtcgt ccatgatctc cttgaaccgc ccgtagccca gcgcgtactg
     1441 cgggatcgcc ttgggccaga gatgagaggc gcggaaggtg ggctcgccgc ggacgccgag
     1501 cagcaggcgc aggtcgtcca tcaccctcgc ggtcagggtg ctgaggtccg cgttggcgag
     1561 atcggggtgg cgcatcccgc cgacgaaggc cgtgagcagg acgtgtccgg cgggcgcgcg
     1621 gccggtgaac acgctggacg agaagatgac gccgagcaca ttgcggcgct cgacctcggg
     1681 aacgaggaag ccgaacccgt ccagcttgtg ggccaggtcc tcgcggcgga accccagggc
     1741 gagcaccgcg accggcgggt gggtgatgct cgccagggtc ttcacccggt cgccaccctc
     1801 gaagggaagg tccacctcgt ccgcgcagtg cgccggcgcg gcatagagca ccgcgtcgta
     1861 cagctccgtc ggctggtagg cggcggtcac ggcccacccc ttcgccccgc ttcgaatctg
     1921 ggttaccggc gccttgaggc ggagctccgg gcggagctca cgcacgaacg cctcggagat
     1981 ctcttgcagc ccgccggtga aggacgtgag cgaggggccg cccgggcccg cgcccgcccg
     2041 catcatctgc cccagcgctt tcatcaccga gccgtgggtg tgctccaggt cgtggagccg
     2101 gggcagggcg tgacgggcgg agagctgctc ggggtccccg gcgtagatgc ccccgatgaa
     2161 cgggttggcg atgtagtcca ggacctcctg attgaaccgg cgccgcacga acgtggcgac
     2221 gctctcctcc atcggtgact ccccgggttc gaccatcggc tcaccgaaga tcgcgagctt
     2281 ggcgccgttg gagaggaggc gggtggtgag cagctgggag ggagcggtcg ggagggcgat
     2341 cagcttcccc ttgcggacga tgtaccgctt gcgcgcctcg cgctgggcct ccagccgggt
     2401 ggcatcgagc cccagctgcg cgaacagctc cgcgctcacg gcgccgacgg ccgccatcga
     2461 gttggggccg agctcggcga ggtagccgtc gcgccgctcg gtgcggatca cgccgcccgc
     2521 ccgctcggag gcctcgtaca ccaccacccg cagccccttc cgcttgagtc ggtatgccgc
     2581 ggtcaggccc gcgagcccgg ccccgacgat cgctaccgcc gccatgcgga ggccagggcc
     2641 gcctcgaccg cgctcagctc ggcgtcgccg tgcacggcgg aggtgaaggc ggcctcgaac
     2701 gccgagggcg gcagatagac gccgccgtcg agcatcgcgt ggaagaacgc gttgtacccc
     2761 gcgcggtcgg tccggcgcgc cgtggcgaaa tcggggaccg ggctcggcgt gaagaacggc
     2821 gtcagcatgg tgccgacccg ctgcaccgtc accgcgaccc ccgcgtcgcg agcgtggcgc
     2881 tcgaccgcct ccgcgatctt cccggcgaac ctctccgccc gctcccaggt gcccggccgc
     2941 gccaggatct ccagggtggc gagcccggcg gccatcgcca gcgggttgcc cgagagcgtg
     3001 cccgcctgat agaccggccc ggcgggcgcg atgcgctcca tcaggtcgcg gcgcccgcca
     3061 taggccgcgg ccggcaggcc gccgcccacc accttgccca cgcaggtgag atccggctcg
     3121 atgccgtaca gcacctgggc cccccgcggg tgggcccgcc atccggtcat cacctcgtcg
     3181 aacaccagca gcgccccgta gcgccgggtg accgcgcgga ggccctgcag gaaaccggag
     3241 gccggcggca ccacgcccat gttgcccggt acgggctcca ccagcaccgc cgcgatctgg
     3301 tcttcgcggg tctcgaagag cgcctccacc gcgcggaggt cgttgaaggg caccaccagg
     3361 gtgtcgccca ccgccccggc cgtgaccccc ggggagtcgg ggaggccgag cgtggcgacg
     3421 ccggacccgg cggcggcgag caggtggtcg gcgtggccgt gatagcagcc gtcgaacttg
     3481 atcaccagcg cgcgcccggt cgccgcgcgg gcgagacgca ccgcgctcat ggtcgcctcg
     3541 gtgccggagc tcacgaaccg caccatgtcc accgagggga aggtggcgac gactcgctcc
     3601 gccagcttga gctcgagctc ggtgggcgcg ccgaaggtgg tgccggcctc cgccgcccgc
     3661 acgatggcct cgagtacctc ggggtgggcg tgccccagga tcagggggcc ccaggagagc
     3721 acgaggtcca cgtaccggtt gccgtccgcg tccaccagcc aggcgccctc gccgcgggcg
     3781 atgaagcgcg gcgtgccgcc gacccccttg aacgctcgca cggggctgtt caccccgccg
     3841 gggatgaccc gctgcgacgc ggcgaagagc cgctcggacg cgctcgtgag ctgcggcgcc
     3901 ctcaccccgg
//
LOCUS       DASUYN010000690         4132 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1543080, whole genome shotgun sequence.
ACCESSION   DASUYN010000690 DASUYN010000000
VERSION     DASUYN010000690.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4132)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4132)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4132
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1543080"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(167..883)
                     /locus_tag="VF061_13455"
     CDS             complement(167..883)
                     /locus_tag="VF061_13455"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX6670565.1"
                     /translation="MPEWFEEWFGEEYLQLYPHRDDAEAERAVALIVAATGLAAGWRV
                     LDVGCGAGRHARAFRTAGARCVGLDLSLTLLRVAQGVTDAPLVRGDMRHLPVRARSMD
                     LTVSLFTSFGYFEQDEEHAGALAQMAATLRPGGWFVIDFLNAAEVRRRLVPSETVALP
                     GGEARVDRAMSADGRYVCKTILTPSGRRYTERVRLFDQDQMIAMLAAAGIEVRHRFGD
                     YAAAPLRPDSPRTILAGRVA"
     gene            complement(890..1357)
                     /gene="rlmH"
                     /locus_tag="VF061_13460"
     CDS             complement(890..1357)
                     /gene="rlmH"
                     /locus_tag="VF061_13460"
                     /inference="COORDINATES: protein motif:HMM:NF000986.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HEX6670566.1"
                     /translation="MTLLLLAVGRLRAAYREACDDYLRRLGRYARVGEAEVREATRAP
                     TVAAQREEEAERLRARLPGGTTVVALAREGSPWTSEELARRMDGWKVAARPLAFVIGG
                     SHGLSPAFLAAASARWSLGPLTLPHELARVVVAEQLYRAFTILRGEPYHKGRA"
     gene            complement(1358..2665)
                     /locus_tag="VF061_13465"
     CDS             complement(1358..2665)
                     /locus_tag="VF061_13465"
                     /EC_number="1.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HEX6670567.1"
                     /translation="MTTVSRPNQDVIRPDKDRALLAEENPFEAMMSRFDYAAQRLSLD
                     PGLYKVLRTPEKQIIVSVPVVRDSGDVDVYTGYRVLYNTSRGPAKGGIRFDTAVTLDE
                     VKALAAWMTWKCAVVNIPFGGAKGGVVCDPFQLSNGELERITRRYTSAIIETLGPDSD
                     VPAPDMNTNERVMAWIMDTYSMHKRHTVTAVVTGKPVEMGGSLGRREATGRGCMLVTR
                     EALKRLRMPIEGTRVVVQGFGNVGSVAAQLMESLGMKVVAVSDKSGGIYDPDGLKIRD
                     VLQHTRQRRFLSDYKEADHIPNQDLLTLDCDVLVPAALENVITSKNAGSIKARIICEG
                     ANGPTTANADKILEQNGVFVIPDILANAGGVTVSYFEWVQDRGGYFWDEDTVNQRLER
                     IMVESFDQVAGMAGRHGINLRIGAYMLAIERVAAVHRLRGMYA"
     gene            complement(2697..3737)
                     /gene="lpxK"
                     /locus_tag="VF061_13470"
     CDS             complement(2697..3737)
                     /gene="lpxK"
                     /locus_tag="VF061_13470"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: protein motif:HMM:NF014645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009029 - tetraacyldisaccharide 4'-kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HEX6670568.1"
                     /translation="MTRRGDSHRVMRWLWTSGRPDARLARLALLPASGLWRGAMAVRG
                     MAYRRGWFQVHDLPLPSVAVGNLSVGGSGKTPIAIWIARHYAAAGLVPGILLRGYGGD
                     ETLVHRHAVPEAVVIADPDRAAGAERALANGAQVLVLDDAYQRLDVRRDLNILVMSAE
                     TTRAVRWALPAGPWRESWHALDRADAVIVTRKRATREAADALAAELGPRVPGPVAIAY
                     LGLHSLAGLVSGRPAPAAALQGKRVVAASGIADPDAFVAQVKATGAAVQVATWKDHHD
                     YRDEDVAWLAHAARRADHVVITEKDAVKLRDRWPAAVPEPLVAVLDLQWEEGGDRIAA
                     ALDAVVTPVERL"
     gene            complement(3734..>4132)
                     /locus_tag="VF061_13475"
     CDS             complement(3734..>4132)
                     /locus_tag="VF061_13475"
                     /inference="COORDINATES: protein motif:HMM:NF015961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF374 domain-containing protein"
                     /protein_id="HEX6670569.1"
                     /translation="YLADFARVLGYRAVRGSSSRGAARALLGAVRELQAGRAVAFTPD
                     GPRGPRRELKPGVVAAAQRGGGVIVPIHARADRAWRLDSWDRFLIPKPGARVTVTYGR
                     PFEVGPGEDGLAAGLAEAGVRLAEIAEVGG"
BASE COUNT          577 a         1556 c         1416 g          583 t
ORIGIN      
        1 tggccgctgg tgaccgcgag cgcgcccggc tccgccagtc gttccagggc ggcttcccgg
       61 gccggcgagg ggacgaaggc ctcgcgaagg gcgggatcga gaccgccgat ccgaggctcc
      121 ggcagcgcga gcggggtgtc gagcggtgta ggaacgaacc ggaaggtcat gcgacgcggc
      181 ctgccagaat ggtgcggggc gagtcgggcc ggagcggcgc cgcggcgtag tcgccgaacc
      241 ggtggcgcac ctcgatcccc gcggcggcga gcatcgcgat catctggtcc tggtcgaaga
      301 gccgcacccg ctcggtgtag cggcgtccgc tgggcgtcag gatggtcttg cagacgtacc
      361 ggccgtcggc cgacatggcc cggtccaccc gggcctcgcc gccgggcagc gcgaccgtct
      421 cactcggcac cagccgccgt cgcacttcgg cggcgttgag gaagtcgatc acgaaccatc
      481 cgccggggcg gagcgtcgcc gccatctggg ccagcgctcc ggcgtgctcc tcgtcctgct
      541 cgaagtagcc gaagctggtg aagaggctca cggtcagatc catgctccgg gcccgaacgg
      601 gaaggtggcg catgtcgccc cggaccaggg gcgcgtcggt cacgccctgc gccacgcgca
      661 gcagggtgag ggagaggtcc agtcccacgc agcgcgcgcc ggcggtgcgg aaggcccggg
      721 cgtgccggcc cgccccgcag ccgacgtcga gcacccgcca ccccgcggcg agccccgtcg
      781 cggccacgat caacgccacc gcccgttccg cctcggcgtc gtcgcggtgc gggtacagct
      841 ggagatactc ctccccgaac cactcctcga accattcggg catcggcgct caggctcgtc
      901 ccttgtgata cggctcgccc cggaggatgg tgaaggcccg gtacagctgc tccgccacga
      961 cgacccgggc caattcgtgg ggcagtgtga gcggccccag actccaccgc gcgctggccg
     1021 ccgcgaggaa ggccggcgac agcccgtggg agccgccgat gacgaacgcc agcggccggg
     1081 ccgccacttt ccaaccgtcc atccgccgag ccagttcctc gctggtccac ggcgacccct
     1141 ccctcgccag ggccaccacc gtggtgcccc cgggaagccg ggcccggagc cgctccgcct
     1201 cctcctcgcg ctgggccgcc acggtcggcg cccgggtcgc ctccctgacc tccgcctcgc
     1261 cgacccgggc atagcgcccg agccggcgca ggtaatcgtc gcaggcctca cggtaggcgg
     1321 cccgcaggcg ccccaccgcg aggagcagca gggtcatcta ggcgtacatt ccgcgcaggc
     1381 ggtgcaccgc cgccacccgc tcgatcgcca gcatgtacgc gccgatccgg aggttgatcc
     1441 cgtggcggcc cgccatgccg gccacctggt cgaacgattc caccatgatg cgctcgagtc
     1501 gctggttcac ggtgtcctcg tcccagaagt acccgccgcg gtcctgcacc cattcgaagt
     1561 agctcaccgt gaccccaccg gcgttggcca ggatgtcggg aatgacgaag accccgttct
     1621 gctccaggat cttgtccgcg ttcgcggtcg tcgggccgtt cgctccttcg cagatgatac
     1681 gtgccttgat cgagccggcg ttcttgctgg tgatgacgtt ctccagggcg gccggcacca
     1741 gcacgtcgca gtcgagcgtg agcaggtcct gattggggat gtgatcggct tccttgtagt
     1801 cgctgaggaa acgacgctgc cgggtgtgct ggaggacgtc ccggatcttg aggccgtcgg
     1861 gatcgtagat ccccccggac ttgtcgctca ccgccaccac cttcatcccc aggctctcca
     1921 tcagctgggc cgcgaccgag cccacgttgc cgaagccctg caccaccacc cgggtgccct
     1981 cgatcggcat ccgcagccgc ttgagcgcct cgcgcgtcac cagcatgcag ccgcgtcccg
     2041 tcgcctcccg tcggccgagc gatccgccca tctcgaccgg cttgccggtg accaccgcgg
     2101 tcacggtgtg gcgcttgtgc atcgagtagg tgtccatgat ccacgccatc actcgctcgt
     2161 tggtgttcat gtccggcgcc gggacgtcgg aatccggtcc cagcgtctcg atgatcgccg
     2221 aggtgtagcg ccgggtgatt cgctccaact ctccgttgga aagctgaaag ggatcgcaca
     2281 ccaccccacc cttggcgccc ccgaagggga tattcaccac cgcgcacttc caggtcatcc
     2341 aggcggccag cgccttcacc tcgtccagcg tcactgcggt atcgaagcgg atccccccct
     2401 tggccggccc ccgggaggtg ttgtacaaca cccgatagcc ggtgtagacg tccacgtcgc
     2461 cgctgtcgcg gaccacggga acggagacga tgatctgctt ctcgggcgtg cgcagcacct
     2521 tgtagagccc gggatcgagg ctgagccgct gggccgcgta atcgaaccgc gacatcatgg
     2581 cctcgaatgg gttctcttcg gcgaggagcg cgcggtcctt gtcgggacgg atgacatcct
     2641 ggttcgggcg ggagacggtg gtcatagagg cgaagtccgg tggctcctgg ggtgtgttac
     2701 agccgttcca cgggcgtgac gacggcgtcc agcgcggcgg cgatgcggtc gccgccttcc
     2761 tcccactgca ggtccagcac ggccaccagc ggctcgggca ccgccgccgg ccagcgatcg
     2821 cgcagcttga ccgcgtcctt ctcggtgatg accacgtggt ccgcccggcg ggccgcatgc
     2881 gccagccagg cgacgtcctc gtcccgatag tcgtggtggt ccttccaggt ggcgacctgc
     2941 accgccgcac ccgtggcctt gacctgggcg acgaaggcgt cgggatcggc gatgccggac
     3001 gcggcgacca cccgctttcc ctgcagggcg gccgccggtg ccggccggcc gctcaccagc
     3061 cccgccagcg agtgcaggcc caggtacgcg atcgccaccg gccccgggac cctgggcccc
     3121 agctcggcgg ccagggcgtc cgcggcctcc cgggtggcgc gcttgcgagt cacgatcacc
     3181 gcgtcggccc ggtccagcgc gtgccagctc tcgcgccagg gtccggcggg cagcgcccag
     3241 cgaaccgccc gcgtggtctc cgcactcatc accaggatgt tgaggtcgcg gcgcacatcg
     3301 agccgctggt aggcgtcgtc caggaccagc acctgggctc cgttggccag cgcccgctct
     3361 gcgccggccg cccggtcggg atcggcgatc accaccgcct ccggcaccgc gtgccggtgc
     3421 accagggtct cgtccccgcc gtagccgcgg agcaggatcc cgggcacgag ccccgccgcc
     3481 gcgtagtggc gggcgatcca gatggcgatg ggcgtcttgc cggagccgcc cacggagaga
     3541 ttgcccacgg cgacggaggg gagcgggagg tcgtgcacct ggaaccagcc gcgtcggtag
     3601 gccatgccgc ggaccgccat ggcgccgcgc cagaggccgg acgcgggcag cagggccagg
     3661 cgcgcgaggc gcgcgtccgg gcgcccgctg gtccagagcc agcgcatgac ccggtgggaa
     3721 tcgccccgtc gcgtcatcca cccacctccg cgatctccgc cagcctcaca ccagcctccg
     3781 ccagtcccgc cgccaggcca tcctcgccgg ggcccacctc gaagggtcgg ccgtaggtga
     3841 cggtgactcg ggcgcccggc ttgggaatga gaaatcggtc ccacgaatct aaccgccagg
     3901 cccggtcggc ccgggcgtgg atcggcacga tcacgccacc ccctcgctgc gcggccgcca
     3961 ccacgcccgg cttgagctcc cggcgcggcc cccgcggacc gtcgggcgtg aacgccaccg
     4021 cccggcccgc ctgaagctcc cggactgccc cgagcagggc ccgggccgcg ccccgggagc
     4081 tggagcctcg gaccgcccgg taccccagca cccgtgcgaa gtcggccagg ta
//
LOCUS       DASUYN010000691         2179 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_659453, whole genome shotgun sequence.
ACCESSION   DASUYN010000691 DASUYN010000000
VERSION     DASUYN010000691.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2179)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2179)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2179
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_659453"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..216)
                     /locus_tag="VF061_13480"
     CDS             complement(<1..216)
                     /locus_tag="VF061_13480"
                     /inference="COORDINATES: protein motif:HMM:NF021988.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactokinase family protein"
                     /protein_id="HEX6670570.1"
                     /translation="MSPARLATSLFASSFATRLGAGDARPTVVTSAPGRVNLIGEHTD
                     YNGGPVLPVALERRTAVAARVAGRWAFA"
     gene            265..1782
                     /locus_tag="VF061_13485"
     CDS             265..1782
                     /locus_tag="VF061_13485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670571.1"
                     /translation="MQRLGIIVCLFIPTRIAAQLPPVGVPSGTVRVELEGSLETFDRR
                     FRNGEREGYGFDLSSPALGSDRIPILLEADTRIGRIIGNPGYRLNLGTLTTDALGDVG
                     NGIAGLAVGLTRHITIFGRIPLVRARTQMKTDLTSTDADGGLNPGESSQLPFFQNFDA
                     ALGTLSSKLAAGDYDGSPATRALAEATLAEATALRSDLFGLLADPTTASPVVPTAGSG
                     TGAAVLARVAGLQNTLASSLSVPGFTLVPALPAAPLDEDGLRQVLTGPLALRLGETTV
                     TFRGDAELGAAVTLIDSWDRGTRRGGVRTAVSALVRLPTGRRERSDSPLDLGTGDGQT
                     DIQLDLVADFGAGDFGARLGGTYVRQLATDVVARVAPPDQPFVGPDRLTFVHQDPGDI
                     IAITIQPFFRLARTLALQGGVRHWSRKADQVSYRAPADALPGVDAGVLAGEAANATLL
                     SAGITYSNPGRLRPGGAGLPVDASWAYERVLRAGGGRVRDAHRIRGQFRVYFGLW"
     gene            complement(1800..>2179)
                     /locus_tag="VF061_13490"
     CDS             complement(1800..>2179)
                     /locus_tag="VF061_13490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HEX6670572.1"
                     /translation="EAARLMLALKVVLSQVDPVPTLIFDEVDQGIGGETGAQVGSALA
                     EVAERHQVLVITHLPQIAARADGHLVVSKEARGGIATSDVQVLHGEDRINEIARMLGD
                     PEGDAARRHAQALLGAPATAKRR"
BASE COUNT          322 a          734 c          748 g          375 t
ORIGIN      
        1 cgcgaatgcc cagcggccag ccacgcgggc cgcgaccgcg gttcgccgct ccagggccac
       61 cggaagcacc gggccgccgt tataatcggt gtgctccccg atgaggttaa cgcggcccgg
      121 cgcggacgtg accacggtgg gccgggcatc cccggcgccg agccgggtgg caaagctcga
      181 ggcgaacagc gaagttgcca gcctcgcggg tgacatgcgc ttaccggtga tcggcttctc
      241 tcgggaggga ctttggggca ttgcgtgcag cgcctcggaa tcatcgtctg cctgttcata
      301 cccacacgga tcgcggcgca actcccaccg gtcggggtgc cgagcggcac ggtccgcgtg
      361 gagctggaag ggtcgctcga aactttcgac cgacgcttcc gcaacggaga acgcgagggt
      421 tacggcttcg atctctccag cccggcgctg ggtagcgacc gcattcctat cctgctggag
      481 gcggacacgc ggatcggccg gatcatcggc aacccaggct accgactcaa tctaggcaca
      541 ctgacgactg atgcgctggg tgacgtgggc aacggcatcg ccggcttggc ggttggcctt
      601 acccggcaca tcacgatctt tggacgcatt ccgctggtgc gtgcccggac gcaaatgaag
      661 acggacctca cctccaccga tgccgacggc ggtctcaatc ccggcgagtc cagtcagctc
      721 ccgttcttcc agaactttga tgccgcgctg ggcaccttga gcagtaagct ggcggcgggg
      781 gactacgatg gcagcccggc cacgagagcc cttgcggagg ccacgcttgc cgaggccacg
      841 gcgctgcgat cggacctctt cggtctgctg gccgacccca cgaccgcatc gcccgtcgtg
      901 cccaccgccg gcagcggaac cggtgcggct gttctcgccc gcgtggcggg ccttcagaac
      961 acgctggcat ccagcctgag tgttcccggt ttcacgctcg ttccggcatt gcctgcggct
     1021 cccctggatg aggatgggct gagacaggtg ctgacgggcc cgctcgccct gcggctcggc
     1081 gagacgaccg tgacgttccg gggcgacgcg gagctggggg ccgcagttac cctgatcgat
     1141 agctgggatc ggggaaccag gcgcggtggg gttcggaccg cagtctccgc cctggtacgt
     1201 ctcccgaccg ggcggcgcga gaggagcgac agcccgctgg atctgggaac cggcgacggg
     1261 cagaccgata tccagcttga cctcgtggcc gacttcggcg ccggagactt cggcgcgcgg
     1321 ctgggtggta cctacgtccg ccagctggcc acagacgttg tcgcgcgagt ggccccgcct
     1381 gaccaaccgt tcgtcggacc tgaccgcctg acgttcgtgc atcaggatcc gggcgacatc
     1441 atcgcgatca ctatccaacc cttctttcgg ctggctcgca ctcttgcgct gcaaggagga
     1501 gtgcggcact ggtcgcgaaa ggccgatcag gtgtcctatc gcgctcccgc cgatgcgttg
     1561 cccggggtgg atgctggcgt cctggccgga gaggccgcca acgccaccct gctatcggcg
     1621 ggcatcacct actccaaccc gggccggctg cggccggggg gagccgggct gccggtagac
     1681 gccagctggg cgtatgagcg cgtgcttcgg gcaggcggtg gccgggtgcg ggatgcacat
     1741 cggatacggg ggcagttcag agtgtacttc ggcttatggt gacgcgggtg taacccgctt
     1801 cagcggcgct tcgcggtcgc cggggctccc agaagcgcct gcgcgtggcg cctggccgcg
     1861 tcgccttcgg gatctcccag catcctggcg atttcgttta ttcggtcttc cccgtggagc
     1921 acctgtacgt cgctggttgc aattccgccc cttgcttcct ttgacaccac gagatggcca
     1981 tccgcccggg cggcgatctg cggcaggtgg gtgatgacga gcacctggtg ccgctccgcc
     2041 acttcggcca gggctgagcc gacctgcgcg ccggtctctc ccccgattcc ctggtcgacc
     2101 tcatcgaaga tcagcgtcgg gacggggtcc acttgcgaga gaacgacctt gagtgccagc
     2161 atgaggcggg ccgcttcgc
//
LOCUS       DASUYN010000692         2227 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_1763075, whole genome shotgun sequence.
ACCESSION   DASUYN010000692 DASUYN010000000
VERSION     DASUYN010000692.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2227)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2227)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2227
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1763075"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1039)
                     /locus_tag="VF061_13495"
     CDS             complement(<1..1039)
                     /locus_tag="VF061_13495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670573.1"
                     /translation="MRAIYGAAALLGCLLPAVVSAQETTDVPVGLPRAVVDLRTAEGA
                     RLVGATWRYHDAAIVPVAHRDVGPDLRASGAPNRTHDIAPQAGAADFDDSDWEVLAPS
                     ELERRRSSGRLAFAWYRTAITLPPAVASFQVRGATVVLELVLDDYAEIWVDGRLPVAL
                     GQTGGQLVKGFNAPNRVVLTTDARPGQTFRIAVFGANGPLSSPPANFIWIRSATLDFH
                     PPAALGGKAAGGRIVRLDPALDRLIPPGAKIEKLAGGFQFTEGPVWHPDGYLLFSDPN
                     ANTIYRWSPDGAVSVYRTKSGYSGFDIGAYRQPGSNGLTLDPGGRLTVNEHGNRRVVR
                     LERPGNVTVLAD"
     gene            complement(1042..1503)
                     /locus_tag="VF061_13500"
     CDS             complement(1042..1503)
                     /locus_tag="VF061_13500"
                     /inference="COORDINATES: protein motif:HMM:NF012417.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX6670574.1"
                     /translation="MRIGIVLFASAMPFGLARAQETGVTHLRSDQVQAAFAQGAPLLE
                     VEDYKIHASRRASEPGLAEVHTRDTDIIYVLQGSATLVTGGRAVATKQTAPEELRGSA
                     IEGGESRDVRPGDVVVVPNGTPHWFKRVEGPLLYYVVKVRQNGRETAVGGM"
     gene            complement(1514..2011)
                     /locus_tag="VF061_13505"
     CDS             complement(1514..2011)
                     /locus_tag="VF061_13505"
                     /inference="COORDINATES: protein motif:HMM:NF015862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HEX6670575.1"
                     /translation="MRLIATPVLAVLLAAALAGEAAGQATTTRQALTLAGAKAVAAAA
                     AAEAGRGHEGGSIAIVDVGGNLMYLERLEPTFPMGAHIATEKARTAALFQRPSKALED
                     VILSGRSTLLSVVPAPLQGGEPLVVGGEIVGAIGVSGAASAARDQAIAAAGVAALGAS
                     TSASR"
BASE COUNT          293 a          824 c          796 g          314 t
ORIGIN      
        1 gatcggcgag cacggtgacg ttgccgggac gctccagccg gaccacgcga cggttgccgt
       61 gctcgttgac ggtgagccgc ccgcccgggt cgagcgtgag cccgttgctc cccggctggc
      121 ggtacgcgcc gatgtcgaag ccgctgtatc cgctcttggt ccggtacacc gacacggcac
      181 cgtccggcga ccagcggtag atcgtgttcg cgttggggtc gctgaagagc agatagccgt
      241 ccgggtgcca caccggcccc tcggtgaact ggaagccgcc cgccagcttc tcgatcttcg
      301 ccccgggagg aatcaggcgg tcgagcgccg ggtccagccg cacgatccgg ccgccggccg
      361 ccttcccgcc cagcgcggcc ggcgggtgaa agtcgagggt cgcggagcgg atccagatga
      421 agttggcggg cggactggag agcggcccgt tcgcgccgaa gacggcgatg cggaaggtct
      481 gaccggggcg ggcatcggtg gtgagcacga cgcggttggg agcgttgaac cccttcacca
      541 gctggccccc cgtctgcccc agggccacgg gcagccggcc gtccacccag atctcggcat
      601 agtcgtcgag caccagctcg aggaccacgg tcgcgccccg cacctggaag ctcgccaccg
      661 cggggggcag cgtgatggcg gtgcgatacc aggcgaacgc cagccgtccc gacgagcggc
      721 ggcgctccag ctccgacggg gccagaacct cccagtccga atcgtcgaaa tcggccgcgc
      781 ccgcctgcgg cgcgatgtcg tgggtgcgat tgggggcgcc cgacgcccgc aggtcgggtc
      841 cgacgtcccg gtgcgccacg gggacgatcg ccgcgtcatg gtagcgccag gtggcgccga
      901 cgagacgggc cccctccgcg gtgcgcaggt ccaccaccgc cctggggagt ccgacgggca
      961 catccgtcgt ctcctgggcg gacaccacgg cgggaagcaa gcagccgagg agtgccgccg
     1021 ccccgtagat ggcgcgcatg gtcacatgcc tcccacggcg gtctcccggc cgttctgccg
     1081 caccttcacc acgtagtaca gcagggggcc ctccacccgc ttgaaccagt gcggcgtgcc
     1141 gttgggcacc acgaccacat cgcccgggcg aacgtcgcgg ctctcgccgc cctcgatggc
     1201 gctgccccga agttcctccg gcgcggtttg cttcgtggcg acggcccgac cccccgtcac
     1261 cagggtggca gacccctgca gtacgtagat gatgtcggtg tcgcgggtgt gcacctctgc
     1321 cagaccgggc tccgaggcgc gccgactcgc gtggatcttg tagtcctcga cctcgagcag
     1381 cggggccccc tgggcgaacg cggcctggac ctggtcgctc cgcaggtggg tgaccccggt
     1441 ctcctgtgcc cgcgccagtc cgaagggcat ggcggaggcg aacagcacga tgccgatgcg
     1501 catgtccggc ctcctagcgg ctggcgctgg tggaggcgcc cagcgcggcg acgcccgccg
     1561 ccgcgatcgc ctggtcgcgc gcggcgctgg ccgcaccgct cacgccgatg gcgccgacga
     1621 tctcgccgcc gaccaccagc ggctctcccc cctggagcgg cgcgggcacc acgctcagca
     1681 gcgtggagcg gccgctcagg atcacgtcct ccagcgcctt gctgggccgc tggaagagcg
     1741 ccgcggtccg cgccttctcc gtcgcgatgt gcgcgcccat cgggaaggtg ggctccaggc
     1801 gctcgaggta catcaggttg ccgccgacgt ccacgatggc gatcgacccg ccctcgtgcc
     1861 cccgtccggc ttccgcggcg gcggcggcgg ccaccgcctt ggcgcccgcc agggtcagcg
     1921 cttgccgggt ggtcgtggcc tgtcccgccg cctcgccggc gagcgcggcc gcgaggagaa
     1981 cggcgaggac gggcgtggcg atgagtctca tgggccctct cggtcggtgt gatgtcggta
     2041 gtcggacagg gtgtggaatg cggcgacccc ccgggaagtt cccgggcccg ttgccgaagc
     2101 ggtatcgcgg gcgtaccttc ccgccgacac tcagacgagc cccgcaaccc cggccgggca
     2161 cacctccgtg cgacctctcc cccttcgccg ctgccggttc cttcccttcg gaggctattc
     2221 gtgagcc
//
LOCUS       DASUYN010000693         2280 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_219051, whole genome shotgun sequence.
ACCESSION   DASUYN010000693 DASUYN010000000
VERSION     DASUYN010000693.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2280)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2280)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2280
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_219051"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(26..1804)
                     /locus_tag="VF061_13510"
     CDS             complement(26..1804)
                     /locus_tag="VF061_13510"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:NF014904.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HEX6670576.1"
                     /translation="MFCTLRAIDSAETGRQIAGVLPVSPLARAPLNFGIDAERCVACL
                     ACVRVCPTDAIAVAGDEPLLLQVVDEACIRCGQCLPACPHDAVKVNGEIGKALAIASQ
                     GDGILILSPESVAHFYPATPEQLINACYAAGFRAVTRGVIGDELVAAEYLKLWEEEPW
                     GTLIRSTDPVVVETVRTQYPELIPYLAPVTVPAVAEARYLRALYRTGLRVAYAGICPP
                     VDTSDLDAAITFGDLEQIFRIRGVSLLAMPTWFERVPEERRRHLSTAGGLPLALLEES
                     RYSSRRFRKIRGLEGLRALARAVAVDRLDLGFVDILSTEGALDHPLSGPHEELYWRRE
                     LVASTEPPRSRFPVVDAAVVASVGATFAIKPRRMKADPEAVAAVLEQIGRGPNGRPWD
                     CRACGFDTCQRFAEAAALGRASMRQCTPYQERRANEAQRAAAVDQMTGLSTYRVLRDQ
                     LAFEVERSKRSNEGFAVLFLDLDRFKDVNDRYGHEAGNEILRAVAGEIRNAVRASDVA
                     ARYGGDEFVVILTRTDLQGAARVAEALRAGIEGTGRRMGYPPGLITVSVGIADFDPKE
                     PAEVDLLVTADRALYRAKAAGRNAVA"
     gene            complement(1869..>2280)
                     /locus_tag="VF061_13515"
     CDS             complement(1869..>2280)
                     /locus_tag="VF061_13515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX6670577.1"
                     /translation="SDIPSDILEGPGTLLPVRVAPREAGAGGQELEFILRSLVELKIQ
                     VEELRRRLDGQPQRVQVIDLGDHTTVHDVLPADDSDGDRAVVYRPGMTMAEVEKAAIE
                     AALQEYRGNRRRAAEVLGIGERTLYRKIKTYRLE"
BASE COUNT          339 a          886 c          711 g          344 t
ORIGIN      
        1 gggtcgccct tgcagtcgta ccgccctacg cgaccgcgtt ccgtcccgcc gccttggcgc
       61 ggtacagcgc gcggtcggcc gtcaccagca ggtccacctc cgccggctcc ttcgggtcga
      121 agtcggcgat gcccacgctc accgtgatga gcccgggagg ataccccatc cgccgacccg
      181 tcccctcgat ccccgcccgc agcgcctcgg ccacccgcgc cgcgccctgg agatcggtgc
      241 gggtaagaat caccacgaat tcgtcgccgc cgtacctggc cgccacgtcg gaggcacgga
      301 ccgcgttccg gatctcgccc gccaccgcgc ggagaatctc gttccccgcc tcgtggccgt
      361 accggtcgtt cacgtccttg aagcggtcga ggtcgaggaa gaggaccgcg aagccctcgt
      421 tgctccgctt gctgcgctcg acctcgaacg ccagctgatc ccgcagcacg cggtacgtgc
      481 tcaagcccgt catctggtcc accgccgccg cccgctgcgc ctcgttggcc cggcgctcct
      541 ggtacggcgt gcactgccgc atgctcgccc gccccagcgc cgccgcctcg gcgaaccgct
      601 ggcaggtgtc gaacccgcac gcccggcagt cccacggccg gccgttcggc ccccggccga
      661 tctgctccag caccgcggcc actgcctccg gatccgcctt catccgccgg ggcttgattg
      721 cgaaggtggc ccccacgctc gccaccaccg ccgcgtccac caccgggaac cggctccgcg
      781 ggggctcggt gctcgccacc agctcccggc gccagtacag ctcctcgtgc ggccccgaca
      841 gcggatggtc cagggctccc tccgtcgaga gaatgtccac gaagcccagg tccagccggt
      901 ccaccgccac cgcccgggcc agcgcccgaa ggccctccag cccgcggatc tttctgaacc
      961 ggcggctgga gtagcgcgac tcctccagca gggccagcgg gagcccgccc gccgtgctca
     1021 ggtgccgccg gcgctcctcc gggacccgct cgaaccaggt cggcatcgcc aggaggctga
     1081 ccccccggat ccggaagatc tgctccaggt cgccgaaggt gatcgccgcg tccaggtcgc
     1141 tggtgtccac cggcgggcag atgcccgcgt atgcgacccg gagcccggtg cggtagagcg
     1201 ctcgcagata tcgcgcctcc gccaccgccg gcaccgtcac cggcgccaag tagggaatca
     1261 gctccgggta ctgggtccgg accgtctcca ccaccaccgg gtcggtggac cggatcaggg
     1321 tgccccaggg ctcctcttcc cacagcttaa ggtattctgc cgcaacgagt tcgtcgccga
     1381 ttacaccccg ggtgacggcc cggaagccgg cggcgtagca cgcgttgatg agctgctcgg
     1441 gtgtggccgg ataaaagtgc gccaccgact ccgggctaag gatcaggatc ccgtcgccct
     1501 gggaggcaat ggcgagagcc ttgccgatct cgccatttac cttgacggcg tcatgggggc
     1561 aggccggcag gcactggccg cagcggatgc aggcctcgtc caccacctgc aacagcaacg
     1621 gctcatcccc cgccaccgcg atcgcgtcgg tggggcacac acgcacgcat gccaagcatg
     1681 cgacacagcg ctcggcgtcg atcccgaaat tcaatggtgc cctggccagg ggggagacag
     1741 gtaagacccc cgcaatttga cggccagtct cggcactgtc aatagcgcgg agggtgcaaa
     1801 acaatgatac agttgtattt agcgaaccgg gacctatcgt ccttagacag cagggccaac
     1861 gggctaagct attccagccg ataggttttg atcttccggt acagggtccg ctccccgatc
     1921 cccagcacct cggccgccct tcggcggttc ccccggtact cctggagggc cgcctcgatg
     1981 gccgctttct ccacctccgc catggtcatc cccggccggt agaccacggc ccggtccccg
     2041 tcgctgtcgt ccgccggcaa cacatcgtgc accgtggtgt ggtcgcccag gtcgatgacc
     2101 tggacccgct ggggctggcc gtccagccgg cgccgcagct cctccacctg gatcttgagc
     2161 tccaccagac tgcggaggat gaactccagc tcctgccccc ccgcgcccgc ctcccggggg
     2221 gccacccgca ccggcagaag ggtgcccggc ccctcgagga tgtcgctcgg gatgtcgctg
//
LOCUS       DASUYN010000694         2557 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_219720, whole genome shotgun sequence.
ACCESSION   DASUYN010000694 DASUYN010000000
VERSION     DASUYN010000694.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2557)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2557)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2557
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_219720"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            750..1040
                     /locus_tag="VF061_13520"
     CDS             750..1040
                     /locus_tag="VF061_13520"
                     /inference="COORDINATES: protein motif:HMM:NF018717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1330 domain-containing protein"
                     /protein_id="HEX6670578.1"
                     /translation="MPGYIMMHAEVTDPEEYEQFKIAATKAVEDHGGRYLARGGASTA
                     LEGDFRSRVVLVEFPSYDDALTFYQSEAYRAAREIRLRCAEASVVAMEGLPS"
     gene            1277..1657
                     /locus_tag="VF061_13525"
     CDS             1277..1657
                     /locus_tag="VF061_13525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670579.1"
                     /translation="MRCDDDVYAAVIRQAAHDAVRALLAASPDSIAGSQALREVTTWL
                     AAEHGAAAVIDLAEELAADLAEAFDALAAAEGRPALAIFDSWFHDVPPPPLTAPGPAR
                     AADPGEAPRGREDRKEPPRGGAAS"
     gene            1756..2514
                     /locus_tag="VF061_13530"
     CDS             1756..2514
                     /locus_tag="VF061_13530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX6670580.1"
                     /translation="MNARRIRELRTTTGRLIEQVAAVAAQLATVAEQLTQTESRHADL
                     AGAVSEDLAPRVSALQQLVTDEFGRLRGEVDILLSERGEQDKTTNPPVDWAGLSAEQA
                     AAQWPILARWVGDVLVPRYELTRDDLPDCWALHPPVVAELSWLRTAYVQAYLTRSPPQ
                     LGADWHTRWRPAVLTRIRELIKPDECSPGKHAPRRGTPIDLAAQNGVLPRAQLAEPRC
                     WWPFYDRAFHLDLALRRARAAAGALNWSPTQASA"
BASE COUNT          409 a          927 c          904 g          317 t
ORIGIN      
        1 gggtcgcccg tctcgttgag gtgcaaccgg tgcccggaga cctcgacctc gcaggcgcgg
       61 atcactgagg gcgccgtaga cgacgtcatc accatcctgc cccccgggcc agatccatcg
      121 ccccgcaagc ccctgtcgct agccgatcga agccttcaat ggaggcgcca gtgcaccacg
      181 agcgccggca cgtgtcgagc agccaacggg ccgagtaacg gtccgcctat gccgaccagg
      241 ccaagaagaa ggaccacggg ctccgcccgc acccgacacc gctcagagat cagcggaagg
      301 gcaccagggg cggcaacctc ctcccggcac gccacgaggg cagccagacc gcgcaccggg
      361 gcgcaaggcg gaagaacgtg ccctgccgcc cggcacccgg cccggcaggg acgagcccgc
      421 gccgtgagga gatcaccacc cagcctgagg cgcgagaggg cacgaccccg taggtgaaga
      481 tccaagatca tcgggcaaca gtcgtgcatc aaggagccgg cgaacacggg gtcggagcgg
      541 tcacgaaggg ggtgggatcg aaccgccgac cttccgcttt gaggcgaagc tgtgccccgc
      601 aactccgagc cgggtgagcc accaaccccg aaggccagtg ctgcccagat ctgtgggacg
      661 tcgcggtgcg gcccgtcgcg cacagatgct tccgcatcct gtcgcatcgg acgagaatcg
      721 ggtcggccct tcgcgacgga ggatcgatca tgcccggtta catcatgatg cacgccgagg
      781 tcaccgaccc cgaggagtac gagcagttca agatcgccgc gacgaaggcc gtcgaagatc
      841 acggcggcag atatctggcc cgtggaggcg cgagcacggc gttggagggc gacttccgtt
      901 ccagggtcgt gctggtggag ttcccgagct acgacgatgc cctgaccttc taccaatccg
      961 aggcgtacag ggccgcccgt gagattcggt tgcggtgcgc cgaggcgagt gtcgtggcca
     1021 tggagggcct gccaagttga tgcgggccac cccggccagg gcgacctgaa atgggacatg
     1081 agggcctgcc gcatgaggtg cccagcgttc ctggcatgag gtgcccagag ttcctggcat
     1141 gagatgacca gggcgagcgg tcgcctgctg aaccgggtcc tgggcgcggc cgtcttgccc
     1201 ggcagaggtg tgctggacgc aacgggccag gccccgccca gggccgatcc ggacggactg
     1261 cgggaggtcg cttgtcatga ggtgtgacga cgatgtgtac gcggcggtga tccgtcaggc
     1321 cgcgcacgac gcggtacgcg ccctgctggc cgcatcaccg gactcgatag ccggttcgca
     1381 ggcactgcgc gaggtgacga cgtggctggc cgccgagcac ggcgccgccg cggtgatcga
     1441 cctggccgag gagctggccg ccgacctggc ggaggccttc gacgcgcttg ccgcggccga
     1501 gggccggccc gccctggcca tcttcgacag ctggttccac gacgtcccgc cgccgcccct
     1561 cacggcaccc ggccccgcgc gcgccgccga tcccggtgag gctccgcgcg gccgcgagga
     1621 ccggaaggaa cctccccgcg gcggggctgc gtcatgacgg gcggcgagcc tctctcggcg
     1681 accccgcggc caagcgaggg agccccgcgc gatccgaccg cctccacgac ccgccaggac
     1741 gacgccgagt cattggtgaa cgcgcggcgg atccgggagt tgcgcacgac aaccgggcgg
     1801 ctcatcgagc aggtcgccgc cgtcgccgcg caactggcca cggtcgccga gcagctcaca
     1861 caaaccgaaa gccgacacgc cgacctggcc ggcgccgtgt cggaggatct cgccccccgg
     1921 gtcagcgcac tgcagcagct agtcaccgac gagttcggcc ggctccgcgg cgaggtcgac
     1981 atcctgctgt ccgagcgggg agaacaggac aagaccacca atccgccggt cgactgggcc
     2041 gggctcagcg ccgagcaggc cgccgcgcag tggccgatcc tggcccgctg ggtcggggac
     2101 gtcctggtcc cgcgctacga gctcacccgc gacgaccttc cggactgctg ggcgctgcac
     2161 ccgccggtcg tcgccgagct gtcctggctg cgcaccgcct acgtgcaggc ctacctgacc
     2221 cggtccccgc cccagctggg cgcggactgg cacacccgct ggcggccggc ggtgctgacc
     2281 cggatccggg agctgatcaa gcccgacgag tgctcgcccg gcaagcacgc gccgcggcgc
     2341 ggcacgccga tcgacctggc cgcgcagaac ggggtgctgc cgcgtgcgca gctggccgag
     2401 ccacggtgct ggtggccgtt ctacgaccgc gccttccacc tcgacctggc gctccgccgg
     2461 gcccgcgccg ccgcgggcgc gctgaactgg tccccgaccc aggcgagcgc ctgacccggc
     2521 gagacggctg ccccgcgccg tgtggcagac cggtttg
//
LOCUS       DASUYN010000695         2293 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U1896
            k141_880353, whole genome shotgun sequence.
ACCESSION   DASUYN010000695 DASUYN010000000
VERSION     DASUYN010000695.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961227
            Sequence Read Archive: SRR25158380
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2293)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2293)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 17:46:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,709
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,682
            CDSs (with protein)               :: 2,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 18
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 1 of 8
            Pseudo Genes (incomplete)         :: 8 of 8
            Pseudo Genes (internal stop)      :: 0 of 8
            Pseudo Genes (multiple problems)  :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2293
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_880353"
                     /isolate="SMAG_U1896"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="26.86611111 N 100.1480556 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..756)
                     /gene="trpB"
                     /locus_tag="VF061_13535"
     CDS             complement(<1..756)
                     /gene="trpB"
                     /locus_tag="VF061_13535"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HEX6670581.1"
                     /translation="MDAALLSAEASVAGRFGPYGGRYVPETLVAALDDLTALYDAARA
                     DPAFWAELDLLLAEFVGRPSPISVAPRLSEEVGAPVFLKREDLNHTGAHKINNTVGQA
                     LLARRMGKRRIIAETGAGQHGVATATVCARFGLECVVYMGAEDVSRQALNVYRMRLLG
                     ATVVPVESGTRTLKDATNEALRDWVTNVPTTHYIIGSVVGPDPYPRMVRDFQAVIGRE
                     ARAQFRRLAGRDPDAAVACVGGGSNAIGLFSAYL"
     gene            complement(731..1378)
                     /locus_tag="VF061_13540"
     CDS             complement(731..1378)
                     /locus_tag="VF061_13540"
                     /inference="COORDINATES: protein motif:HMM:NF012900.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HEX6670582.1"
                     /translation="MTVSVKICGLTRPEDAAFAVAAGAAFLGVVLAGGPRRVSFARAA
                     EVAAASRGVPVLGVFGDQRVEEIVELAHRAGLAGAQLHGSYTADEAAGLAEAGLIVWR
                     VLRIARPADLDLLSETSLGAATVLVEPKVPQADGGTGVPLDLALAVEARRRLAGLRMA
                     LAGGLTPETVGHAVALVRPDVVDVSSGVEALPGIKDHEKIARFLEAVLGRSPTVG"
     gene            complement(1368..2156)
                     /gene="trpC"
                     /locus_tag="VF061_13545"
     CDS             complement(1368..2156)
                     /gene="trpC"
                     /locus_tag="VF061_13545"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: protein motif:HMM:NF001377.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004425 - indole-3-glycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006568 - tryptophan metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HEX6670583.1"
                     /translation="MAVSLDQILAATRRELPALERRRSAVEREAADRAAPPSLGAALR
                     TDRVAVVAEVKRRSPSAGVIREDLEPGERAALYASHGAAAISVLTEGPHFGGSMADLR
                     AAASRVAVPVLRKDFILDELQILEARAAGAAAVLLIVRVLSPERLQSLHEAAGSAGLE
                     ALVEVHTAAELERALEVGARMVGVNSRDLDTFRIDPAAAWELLAQVPPETIAVAESGM
                     HRQADLERAAAAGADAVLIGTALSAAPDPAGLLRELSRVPRRDR"
BASE COUNT          350 a          849 c          801 g          293 t
ORIGIN      
        1 gaggtacgcc gagaagagcc cgatcgcgtt cgatccgcca cccacgcacg ccacggcggc
       61 gtccggatct ctcccggcga gcctgcggaa ctgcgcccgc gcctcccggc cgatcaccgc
      121 ctggaagtcc cggaccatgc gggggtaggg atccgggccc accacggagc cgatgatgta
      181 gtgggtggtg ggaacgttgg tgacccagtc gcgcagggcc tcgttggtcg cgtccttgag
      241 agtgcgggtt cccgactcca ccggaaccac ggtcgctccc agcaggcgca tgcggtagac
      301 gttgagcgcc tgccgggaca cgtcctcggc gcccatgtac accacgcact cgagcccgaa
      361 ccgggcgcag accgtcgcgg tggcgacgcc atgctgcccc gcaccggtct cggcgatgat
      421 gcggcgcttg cccatccggc gggcgagcag cgcctggccg accgtgttgt tgatcttgtg
      481 ggcgcccgta tggttgaggt cctcgcgctt gaggaacacc ggcgccccga cttcctcgga
      541 gaggcgcggc gccacggaga tgggcgaggg ccgacccacg aactcggcca gcagcaggtc
      601 gagttcggcc cagaacgcgg gatcggcgcg cgcggcgtcg tagagcgcgg tcagatcgtc
      661 gagcgcggcc accagcgtct cggggacgta gcggcctccg tagggcccga accggccggc
      721 aaccgacgcc tcagccgaca gtagggctgc gtccaagcac cgcctccaga aagcgcgcga
      781 tcttctcgtg gtccttgatg ccggggaggg cttccacccc tgaacttaca tccaccacat
      841 cgggtcgaac gagagccacc gcgtggccta cggtctcggg cgtgaggccg ccggcgagtg
      901 ccatgcgcag accggcgagc cggcgccgcg cctcgaccgc gagcgccagg tccagcggga
      961 cgcccgtgcc gccgtccgcc tgaggcactt tgggctcgac cagcaccgtg gcggcgccga
     1021 gggaggtctc cgacaggagg tcgaggtccg cgggcctcgc aattcgcagc acccgccaga
     1081 cgatgagccc ggcctccgcc agcccggcgg cctcgtcggc ggtgtacgac ccgtggagct
     1141 gggcaccggc aagcccggcc cggtgcgcga gctccacgat ctcctccacc cgctggtccc
     1201 cgaagacccc gagcaccgga acgcctcgcg acgcggccgc cacctccgcg gccctcgcga
     1261 agctcacccg acggggtcca ccagcaagaa cgacgcccag gaacgcggcg ccggcggcca
     1321 cggcgaacgc ggcgtcctcg ggtcgggtga gcccacagat cttgacgcta acggtcacgg
     1381 cgcgggaccc gcgagagctc gcgcaggagc ccggcgggat cgggggcggc ggagagcgcg
     1441 gttccgatga gtacggcatc ggcgcccgcc gccgccgctc gttcgaggtc cgcctgccgg
     1501 tgcatgccgc tctcggccac ggcgatggtc tccgggggaa cctgggccag cagctcccag
     1561 gcagcggccg ggtcgatccg gaaggtgtcg agatccctgc tgttgacgcc caccatcctc
     1621 gcgcccacct ccagcgcccg ctccagctcc gcggccgtgt gcacctcgac cagggcttcg
     1681 aggccggccg aacccgccgc ctcgtggagc gactggagcc gctccgggga aagcacccgc
     1741 acgatcagga gtaccgcggc cgcgccggcg gcccgcgcct cgaggatctg gagctcgtcg
     1801 aggatgaagt ccttccgcag gaccggcacc gccacccggg aggccgcagc gcgaagatcg
     1861 gccatcgagc cgccgaagtg gggtccctcc gtgagcaccg agatcgcggc cgcaccgtgt
     1921 gaagcgtaca gcgcggctcg ttcgcccggc tccagatctt ccctgatgac gccggccgag
     1981 ggagaccggc gcttgacctc cgccaccacc gcgacccgat cggtccggag cgcggccccc
     2041 agcgagggcg gagcggcacg gtccgccgcc tcgcgctcga ccgcgctccg ccgccgttcc
     2101 agcgccggca gctcgcgccg ggtggcggcg agaatctggt ccagcgaaac ggccatcttg
     2161 cccttcggcg cgtgttcggg taagataatt cgggctctgt tcggtcgaat ctacccagtc
     2221 acggagacgg cgcgatgccg ctgaccaagc gtcaaagtga aatcctcagc tacctgcagg
     2281 ggcacatcca gga
//
